Citrus Sinensis ID: 025083

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Secondary Structure (PSIPRED)
cccccccccccccEEcccccccEEEEEEEEEccHHHHHHHHHHccccEEEEEEEcccccEEEEEEcccccccccEEEEEEcccccccccccccEEEEEEEcccccccEEEEEcccccccccccEEEEEcccHHHHHHcccccccEEEEEEccccccEEEEEEEccccccccEEEEEEEccccccccccccEEEEEEEccHHHHHHHHHHHHHHcccEEcccccccccccEEEEEEEcccccEEEEEccccHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHccccccccEEEEEEEEEccHHHHHHHHHHHHccEEEEEcccccccccEEEEEcccccccEEEEEEEEcccccEccccccEEEEEEEccccccEEEEEEEcccccccccEEEEEEccHHHHHHHHHHHcccEEEEEcccccccEEEEEEEcccccccEEEEEEEccccEEccccccEEEEEEEcccHHHHHHHHHHHHHHccccEEEcccccccccEEEEEEEcccccEEEEEccHHHHHHcccc
Coil and Loop (DISEMBL)
MAEASPAAANAELLewpkkdkrrFLHAVYRVGDLDRTIKYYTECFGmellrkrdvpeekysnaflgfgpeqSYFVVELTYNygvtsydigtgfghlaiateddpdgyifeliqrgptpeplCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYgvteytkgnAYAQVAISTDDVYKSAEVVNLVTQELggkitrqpgpipglntkitsfvdpdgwktvLVDNEDFLKELQSE
Flexible Loop (DISEMBL)
MAEASPAAANAellewpkkdkrrflhavyrvgdldrtiKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQelggkitrqpgpipglNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Low Complexity Region (SEG)
MaeaspaaanaelleWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Disordered region (IsUnstruct)
*************LEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF*******
Disordered Region (DISOPRED)
******A*ANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL******
Disordered Region (DISEMBL)
*********NAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Disordered Region (DISPRO)
***********ELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	258	2.2.26 [Sep-21-2011]
Q948T6	291	Lactoylglutathione lyase	yes	no	0.992	0.879	0.714	1e-115
Q39366	282	Putative lactoylglutathio	N/A	no	0.961	0.879	0.709	1e-113
Q8W593	350	Probable lactoylglutathio	no	no	0.972	0.717	0.625	1e-102
Q9KT93	138	Probable lactoylglutathio	yes	no	0.484	0.905	0.449	1e-27
P44638	135	Lactoylglutathione lyase	yes	no	0.484	0.925	0.457	3e-27
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.488	0.933	0.461	7e-27
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.488	0.933	0.461	7e-27
P0AC83	135	Lactoylglutathione lyase	yes	no	0.488	0.933	0.461	2e-26
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.488	0.933	0.461	2e-26
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.488	0.933	0.461	2e-26

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  415 bits (1066), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/291 (71%), Positives = 226/291 (77%), Gaps = 35/291 (12%)

Query: 1   MAEASPAAANAEL-LEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEK 59
           MA  S A  + E+ LEWPKKDK+R LHAVYRVGDLDRTIK YTECFGM+LLRKRDVPEEK
Sbjct: 1   MASGSEAEKSPEVVLEWPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEK 60

Query: 60  YSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED----------------- 102
           Y+NAFLGFGPE + F +ELTYNYGV  YDIG GFGH AIATED                 
Sbjct: 61  YTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKIT 120

Query: 103 -----------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMK 145
                            DPDGY+FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMK
Sbjct: 121 REPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMK 180

Query: 146 LLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAE 205
           LLR  D P+ K  +AMLGYA+ED+TTV+EL Y+YGVTEYTKGNAYAQVAI T+DVYKSAE
Sbjct: 181 LLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAE 240

Query: 206 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 256
            V LVT+ELGGKI RQPGP+PGLNTKI SF+DPDGWK VLVDN DFLKELQ
Sbjct: 241 AVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  408 bits (1049), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/282 (70%), Positives = 224/282 (79%), Gaps = 34/282 (12%)

Query: 8   AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF 67
           A NA+L+EWPKKDKRRFLH VYRVGDLDRTI++YTECFGM++LRKRDVPEEKYSNAFLGF
Sbjct: 2   AENADLVEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGF 61

Query: 68  GPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED------------------------- 102
           GPE S FVVELTYNYGV+SYDIGTGFGH AI+T+D                         
Sbjct: 62  GPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGG 121

Query: 103 --------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE 154
                   DPDGY FELIQRGPTPEPLCQVMLRVGDL R++KF EKALGM+LLR I+ PE
Sbjct: 122 GSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPE 181

Query: 155 LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL 214
               + M+GYAEE ++ VLEL Y+YGVTEYTKGNAYAQ+AI TDDVYKSAEVV +V QEL
Sbjct: 182 YNT-IGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQEL 240

Query: 215 GGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 256
           GGKITR+ GP+PGL TKI SF+DPDGWK VLVDNEDFLKEL+
Sbjct: 241 GGKITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica oleracea var. gemmifera (taxid: 178616)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  371 bits (953), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/288 (62%), Positives = 212/288 (73%), Gaps = 37/288 (12%)

Query: 2   AEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYS 61
            +A+ A    +LL W K DKRR LH VYRVGD+DRTIK+YTEC GM+LLRKRD+PEEKY+
Sbjct: 67  GKAAQATTQDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYT 126

Query: 62  NAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED------------------- 102
           NAFLG+GPE S+FV+ELTYNYGV  YDIG GFGH  IA +D                   
Sbjct: 127 NAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREP 186

Query: 103 --------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLR 148
                         DPDGY FEL++RGPTPEPLCQVMLRVGDL R+IKFYEKA GM+LLR
Sbjct: 187 GPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLR 246

Query: 149 TIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 208
           T D+PE K  +AM+GY  ED+  VLEL Y+YGVTEY KGNAYAQ+AI TDDVYK+AE + 
Sbjct: 247 TRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIK 306

Query: 209 LVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 256
           L     GGKITR+PGP+PG++TKIT+ +DPDGWK+V VDN DFLKEL+
Sbjct: 307 L----FGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9KT93|LGUL_VIBCH Probable lactoylglutathione lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=gloA PE=3 SV=2

 Score =  123 bits (309), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/129 (44%), Positives = 82/129 (63%), Gaps = 4/129 (3%)

Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
           +   MLRVGDL +SI+FY + +GM LLR  ++ E K  LA LGY +E Q  V+EL Y++G
Sbjct: 6   ILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWG 65

Query: 181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
           V +Y KGNAY  +AI  DD+Y + + +    +  GG +TR+PGP+ G  T I    DPDG
Sbjct: 66  VADYEKGNAYGHIAIGVDDIYATCDTI----KAAGGIVTREPGPVKGGTTHIAFVKDPDG 121

Query: 241 WKTVLVDNE 249
           +   L+ N+
Sbjct: 122 YMIELIQNK 130

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P44638|LGUL_HAEIN Lactoylglutathione lyase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=gloA PE=1 SV=1

 Score =  122 bits (306), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/129 (45%), Positives = 82/129 (63%), Gaps = 4/129 (3%)

Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
           +   MLRVGDL RSIKFY+  LGM+LLRT ++PE K  LA LGY + +    +EL Y++G
Sbjct: 3   ILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWG 62

Query: 181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
           V +Y  G AY  +AI  DD+Y + E V    +  GG +TR+ GP+ G +T I    DPDG
Sbjct: 63  VDKYEHGTAYGHIAIGVDDIYATCEAV----RASGGNVTREAGPVKGGSTVIAFVEDPDG 118

Query: 241 WKTVLVDNE 249
           +K   ++N+
Sbjct: 119 YKIEFIENK 127

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  120 bits (302), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 4/130 (3%)

Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
           L   MLRVGDL RSI FY   LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++G
Sbjct: 3   LLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
           V  Y  GNAY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G +T I    DPDG
Sbjct: 63  VESYDMGNAYGHIALSVDNAAEACERI----RQNGGNVTREAGPVKGGSTIIAFVEDPDG 118

Query: 241 WKTVLVDNED 250
           +K  L++ +D
Sbjct: 119 YKIELIEAKD 128

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  120 bits (302), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 4/130 (3%)

Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
           L   MLRVGDL RSI FY   LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++G
Sbjct: 3   LLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
           V  Y  GNAY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G +T I    DPDG
Sbjct: 63  VESYDMGNAYGHIALSVDNAAEACERI----RQNGGNVTREAGPVKGGSTIIAFVEDPDG 118

Query: 241 WKTVLVDNED 250
           +K  L++ +D
Sbjct: 119 YKIELIEAKD 128

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 4/130 (3%)

Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
           L   MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
           V +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDG 118

Query: 241 WKTVLVDNED 250
           +K  L++ +D
Sbjct: 119 YKIELIEEKD 128

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 4/130 (3%)

Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
           L   MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
           V +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDG 118

Query: 241 WKTVLVDNED 250
           +K  L++ +D
Sbjct: 119 YKIELIEEKD 128

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 4/130 (3%)

Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
           L   MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
           V +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDG 118

Query: 241 WKTVLVDNED 250
           +K  L++ +D
Sbjct: 119 YKIELIEEKD 128

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
2213425	291	hypothetical protein [Citrus x paradisi]	0.957	0.848	0.835	1e-130
359483362	292	PREDICTED: lactoylglutathione lyase [Vit	1.0	0.883	0.756	1e-124
224078584	294	predicted protein [Populus trichocarpa]	1.0	0.877	0.764	1e-122
211906514	289	lactoylglutathione lyase [Gossypium hirs	0.992	0.885	0.747	1e-122
356531939	296	PREDICTED: putative lactoylglutathione l	0.984	0.858	0.747	1e-121
356555674	287	PREDICTED: putative lactoylglutathione l	0.984	0.885	0.750	1e-120
449433964	292	PREDICTED: putative lactoylglutathione l	1.0	0.883	0.739	1e-119
255554865	280	lactoylglutathione lyase, putative [Rici	0.930	0.857	0.769	1e-117
388520197	284	unknown [Lotus japonicus]	0.957	0.869	0.742	1e-117
312281931	289	unnamed protein product [Thellungiella h	0.992	0.885	0.719	1e-116

>gi|2213425|emb|CAB09799.1| hypothetical protein [Citrus x paradisi]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/280 (83%), Positives = 240/280 (85%), Gaps = 33/280 (11%)

Query: 12  ELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ 71
           ELLEWPKKDKRRFLHAVYRVGDLDRTIK+YTECFGM+LLRKRDVPEEKYSNAFLGFGPEQ
Sbjct: 12  ELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQ 71

Query: 72  SYFVVELTYNYGVTSYDIGTGFGHLAIATED----------------------------- 102
           S+FVVELTYNYGVTSYDIGTGFGH AIATED                             
Sbjct: 72  SHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHI 131

Query: 103 ----DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCA 158
               DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRT+D PE K  
Sbjct: 132 AFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYT 191

Query: 159 LAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI 218
           LAMLGYAEEDQTTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI
Sbjct: 192 LAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI 251

Query: 219 TRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 258
           TRQPG IPGLNTKITSFVDPDGWKTVLVDNEDFLKE+QSE
Sbjct: 252 TRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 291

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483362|ref|XP_002273346.2| PREDICTED: lactoylglutathione lyase [Vitis vinifera] gi|302144130|emb|CBI23235.3| unnamed protein product [Vitis vinifera]

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 220/291 (75%), Positives = 239/291 (82%), Gaps = 33/291 (11%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAEA+P   + ELLEWPKKDKRRFLH VYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY
Sbjct: 1   MAEAAPVVPSDELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 60

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED------------------ 102
           +NAFLGFGPE++ FVVELTYNYGV  YDIGTGFGH AIAT+D                  
Sbjct: 61  TNAFLGFGPEETNFVVELTYNYGVDKYDIGTGFGHFAIATQDVYKMVEDIRAKGGIITRE 120

Query: 103 ---------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 147
                          DPDGYIFELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMK++
Sbjct: 121 PGPVKGGKSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYEKALGMKMV 180

Query: 148 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 207
           +  D PE K ++AM+GYAEE +TTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKSAEVV
Sbjct: 181 KKTDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240

Query: 208 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 258
           NLVT+ELGGKITRQPGPIPGLNTKITSF+DPDGWKTVLVDNEDFLKEL  E
Sbjct: 241 NLVTKELGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNEDFLKELHKE 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078584|ref|XP_002305564.1| predicted protein [Populus trichocarpa] gi|222848528|gb|EEE86075.1| predicted protein [Populus trichocarpa]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 224/293 (76%), Positives = 237/293 (80%), Gaps = 35/293 (11%)

Query: 1   MAEASPAAA--NAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE 58
           MAE +  A   NAELLEWPKKDKRR LHAVYRVGDLDRTIK+YTE FGM+LLR RD+PEE
Sbjct: 1   MAEEAAKAVTPNAELLEWPKKDKRRLLHAVYRVGDLDRTIKFYTEGFGMKLLRHRDIPEE 60

Query: 59  KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED---------------- 102
           KYSNAFLGFGPE+S FVVELTYNYGVTSYDIG GFGH AIATED                
Sbjct: 61  KYSNAFLGFGPEESNFVVELTYNYGVTSYDIGEGFGHFAIATEDVYKLVEKLRALGGNIT 120

Query: 103 -----------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMK 145
                            DPDGY FELIQRGPTPEPLCQ+MLRVGDL RSIKFYEKALGMK
Sbjct: 121 REPGPVKGGASVIAFVKDPDGYAFELIQRGPTPEPLCQLMLRVGDLDRSIKFYEKALGMK 180

Query: 146 LLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAE 205
           LLR ID PE K  LAM+GYA+E +TTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKSAE
Sbjct: 181 LLRKIDRPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE 240

Query: 206 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 258
           VVNLVTQELGGKITRQPGPIPG+NTKITSF+DPDGWK+VLVDNEDFLKEL  E
Sbjct: 241 VVNLVTQELGGKITRQPGPIPGINTKITSFLDPDGWKSVLVDNEDFLKELHKE 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|211906514|gb|ACJ11750.1| lactoylglutathione lyase [Gossypium hirsutum]

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 216/289 (74%), Positives = 236/289 (81%), Gaps = 33/289 (11%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAE S A  + ELLEWPKKDKRRFLHAVYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY
Sbjct: 1   MAEGSAAVPSTELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 60

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED------------------ 102
           SNAFLGFGPE+S+FVVELTYNYGVTSYDIGTGFGH AIAT D                  
Sbjct: 61  SNAFLGFGPEESHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKMVEDIRAKGGNITRE 120

Query: 103 ---------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 147
                          DPDGYIFELIQR  TPEPLCQVMLRVGDL RS+KFYEKALGMKL+
Sbjct: 121 PGPVKGGSSVIAFVKDPDGYIFELIQRASTPEPLCQVMLRVGDLDRSVKFYEKALGMKLV 180

Query: 148 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 207
           + +D PE K ++AM+GYAEE +TTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKS EVV
Sbjct: 181 KKVDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSGEVV 240

Query: 208 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 256
             V QELGGK+TR+PGPIPG+NTKITSF+DPDGWKTVLVDNEDFLKEL+
Sbjct: 241 EHVIQELGGKVTRKPGPIPGINTKITSFLDPDGWKTVLVDNEDFLKELK 289

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531939|ref|XP_003534533.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/289 (74%), Positives = 236/289 (81%), Gaps = 35/289 (12%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAEA+   +NAELLEWPKKDKRRFLH VYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY
Sbjct: 10  MAEAT--QSNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 67

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED------------------ 102
           +NAFLGFGPEQS+FVVELTYNYGVTSYDIGTGFGH AIAT D                  
Sbjct: 68  ANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNITRE 127

Query: 103 ---------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 147
                          DPDGY FELIQR  TPEPLCQVMLRVGDL RSIKFYEK LG++++
Sbjct: 128 PGPVKGGKSVIAFVKDPDGYAFELIQRSSTPEPLCQVMLRVGDLERSIKFYEKTLGLRVV 187

Query: 148 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 207
           +  D PE K  +AMLGYAEE +TTVLEL Y+YGVTEYTKGNAYAQVAI TDDVYKSAEVV
Sbjct: 188 KKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVV 247

Query: 208 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 256
           N+VTQELGGKITRQPGP+PGLNTKITSF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 248 NIVTQELGGKITRQPGPVPGLNTKITSFLDPDGWKTVLVDNQDFLKELE 296

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555674|ref|XP_003546155.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/289 (75%), Positives = 237/289 (82%), Gaps = 35/289 (12%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAEA+   +NAELLEWPKKDKRRFLH VYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY
Sbjct: 1   MAEAT--QSNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 58

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED------------------ 102
           +NAFLGFGPEQS+FVVELTYNYGVTSYDIGTGFGH AIAT D                  
Sbjct: 59  ANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNVTRE 118

Query: 103 ---------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 147
                          DPDGY FELIQR  TPEPLCQVMLRVGDL RSIKFYEKALG++++
Sbjct: 119 PGPVKGGKSVIAFVKDPDGYAFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKALGLRVV 178

Query: 148 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 207
           +  D PE K  +AMLGYAEE +TTVLEL Y+YGVTEYTKGNAYAQVAI TDDVYKSAEVV
Sbjct: 179 KKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVV 238

Query: 208 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 256
           N+VTQELGGKITRQPGPIPGLNTKIT+F+DPDGWKTVLVDN+DFLKEL+
Sbjct: 239 NIVTQELGGKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNQDFLKELE 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433964|ref|XP_004134766.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus] gi|449479479|ref|XP_004155610.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus]

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 216/292 (73%), Positives = 236/292 (80%), Gaps = 34/292 (11%)

Query: 1   MAEASPA-AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEK 59
           MAEA+ + A NAELLEWPKKDKRRFLH VYRVGDLDRTIK+YTECFGM+LLRKRDVPEEK
Sbjct: 1   MAEAAASLAPNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK 60

Query: 60  YSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED----------------- 102
           YSNAFLGFGPE S FVVELTYNYGV+SYDIG+GFGH AIAT+D                 
Sbjct: 61  YSNAFLGFGPEDSNFVVELTYNYGVSSYDIGSGFGHFAIATQDVYKLVEDIRAKGGIITR 120

Query: 103 ----------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 146
                           DPDGYIFELIQRGPTPEPLCQVMLRVGDL RSIKFY+KALGM+L
Sbjct: 121 EPGPVKGGSSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYDKALGMRL 180

Query: 147 LRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEV 206
           L+ +D PE K  LAM+GYA+E +TTVLEL Y+YGVTEYTKGNAYAQVAI TDDVYKSAEV
Sbjct: 181 LKKVDRPEYKYTLAMMGYADEPETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEV 240

Query: 207 VNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 258
           VN V QELGGKITRQPGP+PG+ TKI SF+DPDGWKTVLVDN DF KEL ++
Sbjct: 241 VNQVNQELGGKITRQPGPLPGIGTKIVSFLDPDGWKTVLVDNADFQKELDNQ 292

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554865|ref|XP_002518470.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223542315|gb|EEF43857.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/273 (76%), Positives = 225/273 (82%), Gaps = 33/273 (12%)

Query: 4   ASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNA 63
           A   A NA++LEWPKKDKRR LHAVYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKYSNA
Sbjct: 3   AEATAPNADVLEWPKKDKRRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKYSNA 62

Query: 64  FLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED--------------------- 102
           FLGFGPE++ FVVELTYNYGVTSYDIGTGFGH AIAT+D                     
Sbjct: 63  FLGFGPEETNFVVELTYNYGVTSYDIGTGFGHFAIATQDVYKLVEEVLAKGGAVTREPGP 122

Query: 103 ------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTI 150
                       DPDGYIFELIQRGPTPEPLCQVMLRVGDL RSI+FYEKALGMKLLR +
Sbjct: 123 VKGGTTVIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLDRSIRFYEKALGMKLLRKV 182

Query: 151 DSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 210
           D PE K  LAM+GYA+E +TTVLEL Y+YGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV
Sbjct: 183 DKPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 242

Query: 211 TQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 243
           TQELGGKITRQPGPIPGLNTKITSF+DPDGWKT
Sbjct: 243 TQELGGKITRQPGPIPGLNTKITSFLDPDGWKT 275

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520197|gb|AFK48160.1| unknown [Lotus japonicus]

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/280 (74%), Positives = 227/280 (81%), Gaps = 33/280 (11%)

Query: 10  NAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGP 69
           NAELL+W KKDKRRFLHAVYRVGDLDRTIK+YTECFGM+LLRKRD+PEEKY+NAFLGFG 
Sbjct: 5   NAELLDWSKKDKRRFLHAVYRVGDLDRTIKFYTECFGMQLLRKRDIPEEKYANAFLGFGS 64

Query: 70  EQSYFVVELTYNYGVTSYDIGTGFGHLAIATED--------------------------- 102
           EQS+FVVELTYNYGVTSYDIGTGFGH AIAT D                           
Sbjct: 65  EQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKFVEDVRAKGGNVTREPGPVKGGST 124

Query: 103 ------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 156
                 DPDGY+FE+IQR  TPEPLCQVMLRVGDL RSIKFYEKALG+K+++  D PE K
Sbjct: 125 VIAFVKDPDGYLFEIIQRASTPEPLCQVMLRVGDLERSIKFYEKALGLKVVKKTDRPEQK 184

Query: 157 CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 216
             +AMLGYAEE +T VLEL Y+YGVTEYTKGNAYAQVAI TDDVYKSAE+VNL TQE GG
Sbjct: 185 YTIAMLGYAEEHETIVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAELVNLATQEFGG 244

Query: 217 KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 256
           KITRQPGPIPGLNTKI SF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 245 KITRQPGPIPGLNTKIASFLDPDGWKTVLVDNQDFLKELE 284

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312281931|dbj|BAJ33831.1| unnamed protein product [Thellungiella halophila]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/289 (71%), Positives = 229/289 (79%), Gaps = 33/289 (11%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
           MAEAS  A NAELL+WPKKD RRFLH VYRVGDLDRTI++YTECFGM+LLRKRDVPEEKY
Sbjct: 1   MAEASAVAPNAELLDWPKKDNRRFLHVVYRVGDLDRTIEFYTECFGMKLLRKRDVPEEKY 60

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED------------------ 102
           SNAFLGFGPE S FVVELTYNYGV+SYDIGTGFGH AI+T+D                  
Sbjct: 61  SNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVETVRAKGGNVTRE 120

Query: 103 ---------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 147
                          DPDGY FELIQRGPTPEPLCQVMLR GDL R+IKFYEKALGM+LL
Sbjct: 121 PGPVKGGNSVIAFVKDPDGYAFELIQRGPTPEPLCQVMLRTGDLDRAIKFYEKALGMRLL 180

Query: 148 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 207
           R I+ PE K  + M+GYAEE +T VLEL Y+YGVTEYTKGNAYAQ+AI TDDVYKS EVV
Sbjct: 181 RRIERPEYKYTIGMMGYAEEYETIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSGEVV 240

Query: 208 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 256
            +V QELGGKITR+ GP+PGL TKI SF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 241 KIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKTVLVDNKDFLKELE 289

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.616	0.454	0.693	6e-97
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.484	0.905	0.449	3.5e-27
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.484	0.905	0.449	3.5e-27
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.484	0.925	0.480	5.7e-27
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.457	0.867	0.463	9.7e-25
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.480	0.911	0.415	2.9e-23
RGD|1307010	298	Glod4 "glyoxalase domain conta	0.306	0.265	0.377	8.7e-22
MGI|MGI:1914451	298	Glod4 "glyoxalase domain conta	0.306	0.265	0.355	1.1e-19
UNIPROTKB|F1RHJ9	496	GLOD4 "Uncharacterized protein	0.302	0.157	0.370	2.7e-18
UNIPROTKB|E1BBM1	298	GLOD4 "Uncharacterized protein	0.306	0.265	0.344	7e-17

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 600 (216.3 bits), Expect = 6.0e-97, Sum P(2) = 6.0e-97
 Identities = 113/163 (69%), Positives = 134/163 (82%)

Query:    94 GHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP 153
             G   IA  +DPDGY FEL++RGPTPEPLCQVMLRVGDL R+IKFYEKA GM+LLRT D+P
Sbjct:   192 GKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNP 251

Query:   154 ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQE 213
             E K  +AM+GY  ED+  VLEL Y+YGVTEY KGNAYAQ+AI TDDVYK+AE + L    
Sbjct:   252 EYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKL---- 307

Query:   214 LGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 256
              GGKITR+PGP+PG++TKIT+ +DPDGWK+V VDN DFLKEL+
Sbjct:   308 FGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 58/129 (44%), Positives = 81/129 (62%)

Query:   121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
             +   MLRVGDL +SI+FY + +GM LLR  ++ E K  LA LGY +E Q  V+EL Y++G
Sbjct:     6 ILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWG 65

Query:   181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
             V +Y KGNAY  +AI  DD+Y + + +       GG +TR+PGP+ G  T I    DPDG
Sbjct:    66 VADYEKGNAYGHIAIGVDDIYATCDTIKAA----GGIVTREPGPVKGGTTHIAFVKDPDG 121

Query:   241 WKTVLVDNE 249
             +   L+ N+
Sbjct:   122 YMIELIQNK 130

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 58/129 (44%), Positives = 81/129 (62%)

Query:   121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
             +   MLRVGDL +SI+FY + +GM LLR  ++ E K  LA LGY +E Q  V+EL Y++G
Sbjct:     6 ILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWG 65

Query:   181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
             V +Y KGNAY  +AI  DD+Y + + +       GG +TR+PGP+ G  T I    DPDG
Sbjct:    66 VADYEKGNAYGHIAIGVDDIYATCDTIKAA----GGIVTREPGPVKGGTTHIAFVKDPDG 121

Query:   241 WKTVLVDNE 249
             +   L+ N+
Sbjct:   122 YMIELIQNK 130

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 63/131 (48%), Positives = 86/131 (65%)

Query:   121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
             L   MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++G
Sbjct:     3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query:   181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPD 239
             V +Y  G AY  +A+S D+   +AE    + Q  GG +TR+ GP+ G  T + +FV DPD
Sbjct:    63 VDKYELGTAYGHIALSVDN---AAEACEKIRQN-GGNVTREAGPVKG-GTTVIAFVEDPD 117

Query:   240 GWKTVLVDNED 250
             G+K  L++ +D
Sbjct:   118 GYKIELIEEKD 128

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 57/123 (46%), Positives = 76/123 (61%)

Query:   121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQ-TTVLELAYSY 179
             L   M+RVG+L RSI FY + LGMKLLRT ++PE K +LA +GY EE     V+EL Y++
Sbjct:     4 LLHTMIRVGNLERSIAFYTQVLGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYNW 63

Query:   180 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 239
             G  +Y  G  +  +AI  DD+Y   E +       GGK+TR PGP+ G  T+I    DPD
Sbjct:    64 GTEKYDLGTGFGHIAIGDDDIYARCEAIAAA----GGKVTRAPGPVAGGTTEIAFVEDPD 119

Query:   240 GWK 242
             G+K
Sbjct:   120 GYK 122

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 54/130 (41%), Positives = 83/130 (63%)

Query:   121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
             +   MLRVG+L +S++FY   LGMKLLR  ++ E K  LA +GY  ED+  V+EL Y++G
Sbjct:     4 ILHTMLRVGNLEKSLQFYIDVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNWG 63

Query:   181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPD 239
             V +Y  G A+  +AI  DDVY++ E +    ++ GGK+ R+  P+ G  T + +FV DPD
Sbjct:    64 VEKYELGTAFGHIAIGVDDVYETVERI----RKSGGKVAREAAPVLG-GTTVIAFVEDPD 118

Query:   240 GWKTVLVDNE 249
              +K  L+ ++
Sbjct:   119 NYKIELIQDD 128

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

RGD|1307010 Glod4 "glyoxalase domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 163 (62.4 bits), Expect = 8.7e-22, Sum P(2) = 8.7e-22
 Identities = 34/90 (37%), Positives = 52/90 (57%)

Query:    22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPE 70
             RR LH V++VG+  +T+ ++ +  GM++LR  +  E            K+S   +GFGPE
Sbjct:     4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:    71 QSYFVVELTYNYGVTSYDIGTGFGHLAIAT 100
               +FV ELTYNYG+  Y +G  F  L +A+
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDFMGLTLAS 93

GO:0005739 "mitochondrion" evidence=IEA;ISO

MGI|MGI:1914451 Glod4 "glyoxalase domain containing 4" [Mus musculus (taxid:10090)]

 Score = 153 (58.9 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
 Identities = 32/90 (35%), Positives = 51/90 (56%)

Query:    22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPE 70
             RR LH V++V +  +T+ ++ +  GM++LR  +  E            K+S   +GFGPE
Sbjct:     4 RRALHFVFKVKNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:    71 QSYFVVELTYNYGVTSYDIGTGFGHLAIAT 100
               +FV ELTYNYG+  Y +G  F  + +A+
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDFMGITLAS 93

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1RHJ9 GLOD4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 156 (60.0 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 33/89 (37%), Positives = 51/89 (57%)

Query:    23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPEQ 71
             R LH V++VG+  +T  +Y +  GM++LR  +  E            K+S   +GFGPE 
Sbjct:   203 RALHFVFKVGNRFQTAYFYRDVLGMKILRHEEFDEGCKAACNGPYDGKWSKTMVGFGPED 262

Query:    72 SYFVVELTYNYGVTSYDIGTGFGHLAIAT 100
              +FV ELTYNYG+ +Y +G  F  + +A+
Sbjct:   263 DHFVAELTYNYGIGNYKLGNDFMGITLAS 291

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E1BBM1 GLOD4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 142 (55.0 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
 Identities = 31/90 (34%), Positives = 50/90 (55%)

Query:    22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDV----------PEE-KYSNAFLGFGPE 70
             RR LH V++VG+   T  +Y +  GM++LR  +           P + K+S    G+GPE
Sbjct:     4 RRALHFVFKVGNRFETACFYRDVLGMKILRHEEFQDGCKAACNGPHDGKWSKTMAGYGPE 63

Query:    71 QSYFVVELTYNYGVTSYDIGTGFGHLAIAT 100
               +FV +LTY +G+ SY +G  F  + +A+
Sbjct:    64 DDHFVTKLTYYFGIGSYQLGNDFLGITVAS 93

GO:0005739 "mitochondrion" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39366	LGUL_BRAOG	4, ., 4, ., 1, ., 5	0.7092	0.9612	0.8794	N/A	no
Q948T6	LGUL_ORYSJ	4, ., 4, ., 1, ., 5	0.7147	0.9922	0.8797	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	4.4.1.5	0.979

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00010980001	SubName- Full=Chromosome chr10 scaffold_297, whole genome shotgun sequence; (292 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00029246001	SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (258 aa)						•	•		0.924
	GSVIVG00038137001	SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (483 aa)						•			0.800
	GSVIVG00027369001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (458 aa)						•			0.800
	GSVIVG00023836001	SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (316 aa)						•			0.800
	GSVIVG00016002001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (703 aa)						•			0.800
	GSVIVG00009475001	SubName- Full=Chromosome undetermined scaffold_235, whole genome shotgun sequence; (770 aa)						•			0.800
	GSVIVG00006903001	SubName- Full=Chromosome chr10 scaffold_179, whole genome shotgun sequence; (407 aa)						•			0.800
	GSVIVG00000550001	SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (476 aa)						•			0.800

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	258
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	1e-168
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	2e-54
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	3e-41
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	2e-37
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	3e-33
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	1e-32
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	5e-24
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	2e-21
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	3e-15
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	3e-14
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	3e-13
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	1e-12
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	3e-11
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-10
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	1e-07
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	5e-07
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-06
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	2e-06
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	4e-05
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	5e-05
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	1e-04
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	4e-04
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	8e-04
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	0.001
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	0.001
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	0.002

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  464 bits (1196), Expect = e-168
 Identities = 199/289 (68%), Positives = 219/289 (75%), Gaps = 37/289 (12%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY 60
            A AS AA   +LLEWPKKDKRR LH VYRVGDLDRTIK+YTEC GM+LLRKRD+PEEKY
Sbjct: 2   SAAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY 61

Query: 61  SNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED------------------ 102
           +NAFLG+GPE S FVVELTYNYGV  YDIGTGFGH  IA ED                  
Sbjct: 62  TNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTRE 121

Query: 103 ---------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 147
                          DPDGY FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKA GMKLL
Sbjct: 122 PGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKLL 181

Query: 148 RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV 207
           R  D+PE K  +AM+GY  ED+TTVLEL Y+YGVTEYTKGNAYAQ+AI TDDVYK+AE +
Sbjct: 182 RKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI 241

Query: 208 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 256
            LV    GGKITR+PGP+PG+NTKIT+ +DPDGWKTV VDN DFLKEL+
Sbjct: 242 KLV----GGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 286

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  171 bits (436), Expect = 2e-54
 Identities = 65/149 (43%), Positives = 83/149 (55%), Gaps = 33/149 (22%)

Query: 8   AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF 67
           A + +L+  PK  KRR LH + RVGDLD+++ +YTE  GM+LLRKRD PE K+S AFLG+
Sbjct: 2   AESGDLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGY 61

Query: 68  GPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED------------------------- 102
           G E S  V+ELT+N+G   YD+G GFGH+AI  +D                         
Sbjct: 62  GDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGG 121

Query: 103 --------DPDGYIFELIQRGPTPEPLCQ 123
                   DPDGY  ELIQR  T + L  
Sbjct: 122 TTVIAFVEDPDGYKIELIQRKSTKDGLGN 150

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  138 bits (350), Expect = 3e-41
 Identities = 60/130 (46%), Positives = 81/130 (62%), Gaps = 4/130 (3%)

Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
           L   MLRVGDL +S+ FY + LGMKLLR  D PE+K +LA LGY +E    V+EL +++G
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG 77

Query: 181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
             +Y  GN +  +AI  DDVYK+ E V    + LGG + R+PGP+ G  T I    DPDG
Sbjct: 78  TEKYDLGNGFGHIAIGVDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDG 133

Query: 241 WKTVLVDNED 250
           +K  L+  + 
Sbjct: 134 YKIELIQRKS 143

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  127 bits (322), Expect = 2e-37
 Identities = 49/121 (40%), Positives = 65/121 (53%), Gaps = 32/121 (26%)

Query: 24  FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG 83
           FLH + RV DL++++ +YT+  GM+LLR++D PE K++  FLG+  E S  V+ELTYN+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 84  VT-SYDIGTGFGHLAIATED-------------------------------DPDGYIFEL 111
               YD G GFGHLA A +D                               DPDGY  EL
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIEL 120

Query: 112 I 112
           I
Sbjct: 121 I 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  117 bits (294), Expect = 3e-33
 Identities = 58/126 (46%), Positives = 82/126 (65%), Gaps = 4/126 (3%)

Query: 125 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY 184
           MLRVGDL RSI FY   LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++GV +Y
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKY 60

Query: 185 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTV 244
             G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG+K  
Sbjct: 61  ELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 116

Query: 245 LVDNED 250
           L++ +D
Sbjct: 117 LIEEKD 122

Length = 129

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  114 bits (289), Expect = 1e-32
 Identities = 53/120 (44%), Positives = 70/120 (58%), Gaps = 9/120 (7%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 182
             MLRV DL +S+ FY   LGMKLLR  D PE K  L  LGY +ED   VLEL Y++G  
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTE 62

Query: 183 E-YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDG 240
           E Y  GN +  +A + DDVY + E +    +E+G ++T+ PG       K  +F+ DPDG
Sbjct: 63  EPYDNGNGFGHLAFAVDDVYAACERL----EEMGVEVTKPPGD---GGMKGIAFIKDPDG 115

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score = 93.2 bits (231), Expect = 5e-24
 Identities = 47/117 (40%), Positives = 64/117 (54%), Gaps = 33/117 (28%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
           RVGDL R+I +YT   GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++
Sbjct: 3   RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYEL 62

Query: 90  GTGFGHLAIATE---------------------------------DDPDGYIFELIQ 113
           GT +GH+A++ +                                 +DPDGY  ELI+
Sbjct: 63  GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 119

Length = 129

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 86.2 bits (214), Expect = 2e-21
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 34/127 (26%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----------EKYSNAFLGFGPE 70
           RR LH V++VG+ ++TIK+Y E  GM++LR  +  E            K+S   +G+GPE
Sbjct: 1   RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE 60

Query: 71  QSYFVVELTYNYGVTSYDIGTGFGHLAIATED-----------------------DPDGY 107
             +FVVELTYNYG+  Y++G  F  + I ++                         P GY
Sbjct: 61  DDHFVVELTYNYGIGDYELGNDFLGITIHSKQAVSNAKKHNWPVTEVEDGVYEVKAPGGY 120

Query: 108 IFELIQR 114
            F LI +
Sbjct: 121 KFYLIDK 127

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 69.8 bits (171), Expect = 3e-15
 Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 12/123 (9%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 182
            V LRVGDL +S+ FY   LG KL+  +D  E      +          VLEL  +    
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGP----LRSAFFTAGGRVLELLLNETPP 59

Query: 183 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 239
                  G+  A +A S DDV  + + +    +  G +I R+PG       + + F DPD
Sbjct: 60  PAAAGFGGHHIAFIAFSVDDVDAAYDRL----KAAGVEIVREPGRHGW-GGRYSYFRDPD 114

Query: 240 GWK 242
           G  
Sbjct: 115 GNL 117

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 67.0 bits (164), Expect = 3e-14
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 27/134 (20%)

Query: 126 LRVGDLGRSIKFYEKALGMKLLR----------TIDSP-ELKCALAMLGYAEEDQTTVLE 174
            +VG+  ++IKFY + LGMK+LR            + P + K +  M+GY  ED   V+E
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVE 67

Query: 175 LAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN-LVTQELGGKITRQPGPIPGLNTKIT 233
           L Y+YG+ +Y  GN +  + I +     +A+  N  VT+   G    +            
Sbjct: 68  LTYNYGIGDYELGNDFLGITIHSKQAVSNAKKHNWPVTEVEDGVYEVK------------ 115

Query: 234 SFVDPDGWKTVLVD 247
               P G+K  L+D
Sbjct: 116 ---APGGYKFYLID 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 64.4 bits (157), Expect = 3e-13
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R  H   RVGDL++++ +YT+  G +L+ + D  E    +AF   G      V+EL  N 
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGG----RVLELLLNE 56

Query: 83  GVTSYDIGT---GFGHLAIATED 102
                  G        +A + +D
Sbjct: 57  TPPPAAAGFGGHHIAFIAFSVDD 79

Length = 120

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 64.5 bits (157), Expect = 1e-12
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 43/150 (28%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTV---------- 172
           Q M R+ D   S+ FY + LGM LL+ +D PE+K +L  LGY  ED  T           
Sbjct: 30  QTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY--EDSETAPTDPPERTVW 87

Query: 173 -------LELAYSYGVTE-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQEL 214
                  +EL +++G TE       Y  GN+    +  + I+ DDVYK+ E      ++L
Sbjct: 88  TFGRKATIELTHNWG-TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKL 142

Query: 215 GGKITRQP--GPIPGLNTKITSFV-DPDGW 241
           G +  ++P  G + GL     +F+ DPDG+
Sbjct: 143 GVEFVKKPDDGKMKGL-----AFIKDPDGY 167

Length = 185

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 61.2 bits (148), Expect = 3e-11
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 39/148 (26%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE--------------- 167
           Q M R+ D   S+ FY + LGM LL+ +D PE+K +L  +GY +                
Sbjct: 78  QTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTF 137

Query: 168 DQTTVLELAYSYGVTE-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 216
            Q   +EL +++G TE       Y  GN+    +  + I+ DDVYK+ E      +ELG 
Sbjct: 138 GQKATIELTHNWG-TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGV 192

Query: 217 KITRQP--GPIPGLNTKITSFV-DPDGW 241
           +  ++P  G + G+     +F+ DPDG+
Sbjct: 193 EFVKKPNDGKMKGI-----AFIKDPDGY 215

Length = 233

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 57.0 bits (138), Expect = 1e-10
 Identities = 32/118 (27%), Positives = 42/118 (35%), Gaps = 13/118 (11%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 182
            V L V DL  ++ FYE  LG ++L            A L        T LEL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGA---EFAFLRLGG----TRLEL-FEGDEP 52

Query: 183 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
               G     +A   DDV  + E +    +  G +I   P   P        F DPDG
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERL----KAAGVEILGGPREEPWGGRVAY-FRDPDG 105

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 29/131 (22%)

Query: 1   MAEASP--AAANAELLEWPKKDKRRFL--HAVYRVGDLDRTIKYYTECFGMELLRKRDVP 56
           MA AS   AA N  L   P +  + ++    ++R+ D   ++ +Y+   GM LL++ D P
Sbjct: 1   MASASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFP 60

Query: 57  EEKYSNAFLGF---------GPEQSYFV------VELTYNYGVTS------YDIG----T 91
           E K+S  FLG+          PE++ +       +ELT+N+G  S      Y  G     
Sbjct: 61  EMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPR 120

Query: 92  GFGHLAIATED 102
           GFGH+ I  +D
Sbjct: 121 GFGHIGITVDD 131

Length = 185

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 30/124 (24%)

Query: 126 LRVGDLGRSIKFYEKALGMKL---------LRTIDSPELKCALAMLGYAEEDQTTVLELA 176
           L V DL  +  FYE+ LG ++          R      L   + ++G  E D        
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEEEDGEYAEFRLGLVLALGGFIELIGLPEPDAP------ 54

Query: 177 YSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 236
                     G     +    DD+     +V  + +  GG I   P   P    +     
Sbjct: 55  ----------GGGGVHLYFEVDDL---DALVARL-KAAGGTILEPPEDTPW-GGREFYVR 99

Query: 237 DPDG 240
           DPDG
Sbjct: 100 DPDG 103

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 22/118 (18%), Positives = 34/118 (28%), Gaps = 40/118 (33%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H    V DL+  + +Y +  G E+L +     E     F       +   +   +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE-----FAFLRLGGTRLEL---FEGDEP 52

Query: 86  SYDIGTGFGHLAIATED--------------------------------DPDGYIFEL 111
           +   G G  HLA   +D                                DPDG + EL
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 46.9 bits (111), Expect = 2e-06
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 25/100 (25%)

Query: 28  VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY-------------- 73
           +YR+ D   ++ +Y+   GM LL++ D PE K+S  F+G+    S               
Sbjct: 80  MYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQ 139

Query: 74  -FVVELTYNYGVTS------YDIGT----GFGHLAIATED 102
              +ELT+N+G  S      Y  G     GFGH+ I  +D
Sbjct: 140 KATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDD 179

Length = 233

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 17/131 (12%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLL-RTIDSPELKCALAMLGYAEEDQTTVLELAYSY-- 179
            V L V DL  SI FY   LG++L+  T++  +      +L    +     L   + +  
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEG 64

Query: 180 ----------GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLN 229
                      +           +A   DD       +  +  + G +I        G  
Sbjct: 65  RAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPD-GVRIELGEPGRGG-- 121

Query: 230 TKITSFVDPDG 240
                F DPDG
Sbjct: 122 -VHVYFRDPDG 131

Length = 138

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 42.1 bits (98), Expect = 5e-05
 Identities = 26/121 (21%), Positives = 37/121 (30%), Gaps = 24/121 (19%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
               H    V DL+ +I +YT+  G+ L++      +      L F          L + 
Sbjct: 1   MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFF 60

Query: 82  YGVTSYDIG-------------TGFGHLAIATED-----------DPDGYIFELIQRGPT 117
                   G              G GHLA   +D           DPDG   EL + G  
Sbjct: 61  GFEGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRG 120

Query: 118 P 118
            
Sbjct: 121 G 121

Length = 138

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 29/121 (23%), Positives = 37/121 (30%), Gaps = 24/121 (19%)

Query: 126 LRVGDLGRSIKFYEKALGMKLLR--TIDSPELKCALA----MLGYAEEDQTTVLELAYSY 179
           L V DL R+  FYEK  G        +         A      G                
Sbjct: 15  LPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARP---------- 64

Query: 180 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 239
                  G     +  + DD+  + E V       GGK+ R     PG    I  FVDP+
Sbjct: 65  ---GSPPGGGGWVIYFAVDDIDATLERV----VAAGGKVLRPKTEFPGGGR-IAHFVDPE 116

Query: 240 G 240
           G
Sbjct: 117 G 117

Length = 127

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDS 152
            V LRV DL RS+ FY+  LG+++L   DS
Sbjct: 5   AVTLRVADLERSLAFYQDVLGLEVLERTDS 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.9 bits (89), Expect = 8e-04
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 5/98 (5%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +R  H V  V D++ T+ +YT   GME++R  +    + +   L FG  Q   +  +   
Sbjct: 2   KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGE-EVGRKA---LRFGS-QKINLHPVGGE 56

Query: 82  YGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPE 119
           +   +   G G   L + TE   D  +  L   G   E
Sbjct: 57  FEPAAGSPGPGSDDLCLITEPPIDELVAHLEAHGVPIE 94

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.5 bits (88), Expect = 0.001
 Identities = 29/130 (22%), Positives = 40/130 (30%), Gaps = 26/130 (20%)

Query: 124 VMLRVGDLGRSIKFYEKA---LGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
           V L V DL R+  FY+     LG+K +              +GY +        +   + 
Sbjct: 4   VTLGVNDLERARAFYDAVLAPLGIKRVMEDGP-------GAVGYGKGGGGPDFWVTKPFD 56

Query: 181 VTEYTKGNAYAQVAISTDD------VYKSAEVVNLVTQELGGKITRQPGPIPGLNTK--I 232
               T GN    VA +          + +A          GG     PG  P        
Sbjct: 57  GEPATAGNG-THVAFAAPSREAVDAFHAAA-------LAAGGTDEGAPGLRPHYGPGYYA 108

Query: 233 TSFVDPDGWK 242
               DPDG K
Sbjct: 109 AYVRDPDGNK 118

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 37.5 bits (88), Expect = 0.001
 Identities = 30/123 (24%), Positives = 45/123 (36%), Gaps = 28/123 (22%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELL-RKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV 84
           H    V DL+  +K+Y +  G+    R+    E+    AFLG G  Q    +EL      
Sbjct: 3   HIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNVQ----IEL------ 52

Query: 85  TSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGM 144
                        I   DD       L +RG     +      V D+  ++    KA G+
Sbjct: 53  -------------IEPLDDDSPIAKFLEKRGEGLHHIA---FEVDDIDAALARL-KAQGV 95

Query: 145 KLL 147
           +LL
Sbjct: 96  RLL 98

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 2/82 (2%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R  H    V DL+   K+Y +  G ++    ++PE+     F+  G  +   +  L  + 
Sbjct: 1   RIDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDS 60

Query: 83  GVTSY--DIGTGFGHLAIATED 102
            +  +    G G  H+AI  +D
Sbjct: 61  PIAKFLEKNGGGIHHIAIEVDD 82

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	258
PLN02300	286	lactoylglutathione lyase	100.0
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	100.0
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.97
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.97
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.96
PLN02367	233	lactoylglutathione lyase	99.87
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.86
PRK10291	129	glyoxalase I; Provisional	99.85
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.85
PLN03042	185	Lactoylglutathione lyase; Provisional	99.83
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.82
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.82
PLN02300	286	lactoylglutathione lyase	99.81
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.8
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.8
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.8
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.8
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.79
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.78
PRK11478	129	putative lyase; Provisional	99.78
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.78
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.78
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.77
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.76
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.76
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.76
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.75
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.74
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.74
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.74
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.72
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.72
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.72
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.72
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.72
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.71
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.71
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.71
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.71
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.71
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.7
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.7
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.7
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.7
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.7
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.7
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.7
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.7
PRK06724	128	hypothetical protein; Provisional	99.7
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.69
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.69
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.68
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.68
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.68
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.68
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.66
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.66
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.66
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.66
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.65
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.65
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.65
PLN02367	233	lactoylglutathione lyase	99.65
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.64
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.64
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.64
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.64
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.64
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.63
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.63
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.62
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.61
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.61
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.61
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.61
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.6
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.6
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.6
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.59
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.59
PLN03042	185	Lactoylglutathione lyase; Provisional	99.59
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.58
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.54
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.54
PRK10291	129	glyoxalase I; Provisional	99.53
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.52
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.51
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.5
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.49
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.43
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.42
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.41
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.39
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.38
PRK11478	129	putative lyase; Provisional	99.37
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.35
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.35
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.33
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.32
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.31
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.31
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.3
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.29
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.27
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.27
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.26
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.26
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.25
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.24
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.24
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.23
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.23
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.22
PRK06724	128	hypothetical protein; Provisional	99.21
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.2
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.18
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.18
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.18
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.18
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.18
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.17
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.17
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.17
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.15
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.15
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.13
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.13
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.13
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.12
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.1
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.1
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.1
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.1
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	99.09
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.09
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.08
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.07
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.07
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.05
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.04
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.03
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.02
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.02
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.95
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	98.93
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	98.93
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	98.91
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	98.91
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	98.9
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	98.88
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	98.86
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	98.85
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	98.84
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	98.82
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	98.8
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	98.79
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	98.78
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.75
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	98.74
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	98.73
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	98.7
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	98.68
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	98.66
COG3324	127	Predicted enzyme related to lactoylglutathione lya	98.61
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.58
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.51
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	98.48
PRK10148	147	hypothetical protein; Provisional	98.44
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.39
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.38
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	98.37
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	98.25
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.15
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.1
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	97.99
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.92
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.89
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	97.53
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	97.47
COG3607	133	Predicted lactoylglutathione lyase [General functi	97.43
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.42
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.21
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	96.47
PF15067	236	FAM124: FAM124 family	96.13
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	96.1
PF15067	236	FAM124: FAM124 family	95.43
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	95.07
PRK10148	147	hypothetical protein; Provisional	94.67
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	92.96
PRK11700	187	hypothetical protein; Provisional	92.94
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	91.74
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	87.37

>PLN02300 lactoylglutathione lyase

Probab=100.00  E-value=4.2e-42  Score=288.31  Aligned_cols=251  Identities=78%  Similarity=1.311  Sum_probs=202.2

Q ss_pred             CCCCccccchhhccCcccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEee
Q 025083            2 AEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN   81 (258)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   81 (258)
                      |.||.||+.++|++|+.+.+.++.||+|.|+|+++|++||+++|||++..+...++..+..+|+..++....+.+++...
T Consensus         3 ~~~~~~~~~~~~~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~   82 (286)
T PLN02300          3 AAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYN   82 (286)
T ss_pred             cccccChhhhhhhcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEecc
Confidence            56788999999999998999999999999999999999999999999876544444455667777654445567777654


Q ss_pred             cCCCcccCCCCeeeEEEEcCC---------------------------------CCCCcEEEEEECCCCCCCceeeeEEe
Q 025083           82 YGVTSYDIGTGFGHLAIATED---------------------------------DPDGYIFELIQRGPTPEPLCQVMLRV  128 (258)
Q Consensus        82 ~~~~~~~~~~~~~hia~~v~d---------------------------------DP~G~~iel~~~~~~~~~i~hv~l~v  128 (258)
                      .+......+.++.|++|.|+|                                 ||+|+.|||++....+.++.|+.|.|
T Consensus        83 ~~~~~~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~  162 (286)
T PLN02300         83 YGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRV  162 (286)
T ss_pred             CCCCccccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEe
Confidence            333333345688999999998                                 99999999999988888999999999


Q ss_pred             cChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHHHHHHH
Q 025083          129 GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  208 (258)
Q Consensus       129 ~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~  208 (258)
                      +|++++.+||+++|||+.......++.++...++..++......+++..+.....+..+++++|++|.|+|+++.++++ 
T Consensus       163 ~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~-  241 (286)
T PLN02300        163 GDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI-  241 (286)
T ss_pred             CCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHH-
Confidence            9999999999999999987654444445666666543322234566655443333445678999999999999999999 


Q ss_pred             HHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhhhHhhh
Q 025083          209 LVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ  256 (258)
Q Consensus       209 ~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~  256 (258)
                         +++|+++..+|...++.+++.++|+||||+.|+|++..+|+++++
T Consensus       242 ---~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~~~~  286 (286)
T PLN02300        242 ---KLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE  286 (286)
T ss_pred             ---HHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhhhcC
Confidence               899999999888777655578999999999999999999999875

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3e-38  Score=243.66  Aligned_cols=235  Identities=47%  Similarity=0.830  Sum_probs=199.6

Q ss_pred             hhccCcccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCC-----------CCeEEEEeccCCCCceeEEEEEe
Q 025083           12 ELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----------EKYSNAFLGFGPEQSYFVVELTY   80 (258)
Q Consensus        12 ~~~~~~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~   80 (258)
                      +|+.|+..+..+.-|+.+.|.|.+++++||+++|||++.+.++.+.           +.|+..++++|+++.++.+||+.
T Consensus         6 d~~~~~~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTY   85 (299)
T KOG2943|consen    6 DLLCWMKADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTY   85 (299)
T ss_pred             hhhhhhhccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEe
Confidence            8999999999999999999999999999999999999998877665           67899999999999999999999


Q ss_pred             ecCCCcccCCCCeeeEEEEcCC------------------------CCCCcEEEEEECCCCCCCceeeeEEecChhhHHH
Q 025083           81 NYGVTSYDIGTGFGHLAIATED------------------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIK  136 (258)
Q Consensus        81 ~~~~~~~~~~~~~~hia~~v~d------------------------DP~G~~iel~~~~~~~~~i~hv~l~v~d~~~s~~  136 (258)
                      +++...+..|+++.||.+.++|                        ||||+.++|+++.+.+.++..|+|+|.|+++|+.
T Consensus        86 NYgV~~YelGndfg~i~I~s~dv~~~ve~v~~p~~~~~g~~~~~v~dPdGykF~l~~~~p~s~pv~~V~l~VgdL~ks~k  165 (299)
T KOG2943|consen   86 NYGVSKYELGNDFGGITIASDDVFSKVEKVNAPGGKGSGCGIAFVKDPDGYKFYLIDRGPQSDPVLQVMLNVGDLQKSIK  165 (299)
T ss_pred             ccCccceeccCCcccEEEeHHHHHHHHHHhcCcCCcccceEEEEEECCCCcEEEEeccCCCCCCeEEEEEEehhHHHHHH
Confidence            9999999999999999999987                        9999999999988889999999999999999999


Q ss_pred             HHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHHHHHHHHHHHHhCC
Q 025083          137 FYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG  216 (258)
Q Consensus       137 FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~  216 (258)
                      ||+++|||++.+..    ..++.+.++++.+  .+.|+|.++.+...+..+.|...|++-.+++..+.+.+    +..+.
T Consensus       166 yw~~~lgM~ileke----ek~t~~~mgYgd~--q~~LElt~~~~~id~~kg~griafaip~d~~~~l~e~i----K~~n~  235 (299)
T KOG2943|consen  166 YWEKLLGMKILEKE----EKYTRARMGYGDE--QCVLELTYNYDVIDRAKGFGRIAFAIPTDDLPKLQEAI----KSANG  235 (299)
T ss_pred             HHHHHhCcchhhhh----hhhhhhhhccCCc--ceEEEEEeccCcccccccceeEEEeccccccccHHHHH----HHhcc
Confidence            99999999988752    2356788888875  69999999988765555555555555556776666666    77766


Q ss_pred             eeecCCcc--CCCCC-eeEEEEECCCCCEEEEEcchhhhHhhh
Q 025083          217 KITRQPGP--IPGLN-TKITSFVDPDGWKTVLVDNEDFLKELQ  256 (258)
Q Consensus       217 ~i~~~p~~--~~~~~-~~~~~~~DPdG~~iel~~~~~~~~~~~  256 (258)
                      +|..+...  .|++. .+++.+.|||||.|+|+.+++|++.++
T Consensus       236 ~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~lsk  278 (299)
T KOG2943|consen  236 TILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRKLSK  278 (299)
T ss_pred             ccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHHHhc
Confidence            66554332  23332 367778999999999999999998765

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.97  E-value=1.2e-28  Score=207.87  Aligned_cols=207  Identities=22%  Similarity=0.270  Sum_probs=144.2

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~   99 (258)
                      +|++++||.|.|+|++++++||+++|||++..+..    .  .+|+..........+.+...       ...++.|++|.
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~----~--~~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~   67 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK----E--YIYLRGIEEFQHHSLVLTKA-------PSAALSYIGFR   67 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC----C--eEEEeccCcCCceEEEeeeC-------CCcCccEEEEE
Confidence            47899999999999999999999999999876521    1  23333211112223434321       12467899999


Q ss_pred             cCC---------------------------------CCCCcEEEEEECCC---------------CCCCceeeeEEecCh
Q 025083          100 TED---------------------------------DPDGYIFELIQRGP---------------TPEPLCQVMLRVGDL  131 (258)
Q Consensus       100 v~d---------------------------------DP~G~~iel~~~~~---------------~~~~i~hv~l~v~d~  131 (258)
                      |++                                 ||+|+.||++....               ...+++||+|.|+|+
T Consensus        68 v~~~~dl~~~~~~l~~~Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~v~dl  147 (294)
T TIGR02295        68 VSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDV  147 (294)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEeecCCCCceEEEEECCCCCEEEEEEchhhcccccccccccCCccceeeeeEEEEeCCH
Confidence            975                                 99999999986321               235789999999999


Q ss_pred             hhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHHHHHHHHHH
Q 025083          132 GRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVT  211 (258)
Q Consensus       132 ~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~~  211 (258)
                      ++|.+||+++|||++......+.+.....++....  .++.+.+..       ..+.+++|++|.|+|.+++ .++.++|
T Consensus       148 ~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~~Hiaf~v~d~~~v-~~~~~~l  217 (294)
T TIGR02295       148 QRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKG--GVHDIALTN-------GNGPRLHHIAYWVHDPLNI-IKACDIL  217 (294)
T ss_pred             HHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCC--CcCceEeec-------CCCCceeeEEEEcCCHHHH-HHHHHHH
Confidence            99999999999999876643333333345554322  233444321       1235899999999996543 3444555


Q ss_pred             HHhCCe--eecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          212 QELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       212 ~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +++|++  +..+|+.+..+...++|++||+|++|||++..
T Consensus       218 ~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       218 ASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             HhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            899998  66677665443456899999999999998754

The enzyme from Bacillus brevis contains manganese.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.97  E-value=2e-28  Score=207.44  Aligned_cols=206  Identities=21%  Similarity=0.246  Sum_probs=140.1

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      +++++||+|.|+|++++++||+++|||++..+..   .   .+++..........+.+...       ...++.|++|.|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~---~---~~~~~~~~~~~~~~~~l~~~-------~~~g~~hiaf~v   68 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDG---Q---RVYLKAWDEWDHYSVILTEA-------DTAGLDHMAFKV   68 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC---c---eEEEEeccccccceEeeccC-------CCCceeEEEEEe
Confidence            6789999999999999999999999999876532   1   22333211112223333211       124678888888


Q ss_pred             CC------------------------------------CCCCcEEEEEECCC---------------------CCCCcee
Q 025083          101 ED------------------------------------DPDGYIFELIQRGP---------------------TPEPLCQ  123 (258)
Q Consensus       101 ~d------------------------------------DP~G~~iel~~~~~---------------------~~~~i~h  123 (258)
                      ++                                    ||+|+.||++....                     ...+|+|
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H  148 (303)
T TIGR03211        69 ESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDH  148 (303)
T ss_pred             CCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEE
Confidence            74                                    99999999997431                     1346899


Q ss_pred             eeEEecChhhHHHHHHHhcCCeEeeeecCCccce-eEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHH
Q 025083          124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKC-ALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  202 (258)
Q Consensus       124 v~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~  202 (258)
                      |+|.|+|++++.+||+++|||+.......+.+.. ...|+..+..  .+.+.+...      +...+++|++|.|+|+++
T Consensus       149 i~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~g~~~Hiaf~v~~~~~  220 (303)
T TIGR03211       149 CLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK--AHDIAFVGD------PEPGKLHHVSFFLDSWED  220 (303)
T ss_pred             EeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC--CcccceecC------CCCCceEEEEEEcCCHHH
Confidence            9999999999999999999999876543332222 2345543221  222322211      112248999999998654


Q ss_pred             HHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          203 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       203 ~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +. ++.++|+++|+++..+|..+....++++||+|||||+|||+..
T Consensus       221 v~-~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  265 (303)
T TIGR03211       221 VL-KAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFGG  265 (303)
T ss_pred             HH-HHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEecC
Confidence            33 3334558999999888876543345799999999999999833

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.96  E-value=2.8e-27  Score=198.79  Aligned_cols=204  Identities=18%  Similarity=0.231  Sum_probs=139.3

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      +.++.||+|.|+|+++|++||+++|||++..+..  .+   ..|+..+.  ....+.+....       ..++.|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~~---~~~~~~~~--~~~~~~l~~~~-------~~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--ND---ALYLRLDS--RAHRIAVHPGE-------SDDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--Cc---eEEEEcCC--CceEEEEEECC-------cCCeeeEeeee
Confidence            4689999999999999999999999998764321  11   22434322  22233332210       12456677766


Q ss_pred             CC--------------------------------------CCCCcEEEEEECCC--------C----------CCCceee
Q 025083          101 ED--------------------------------------DPDGYIFELIQRGP--------T----------PEPLCQV  124 (258)
Q Consensus       101 ~d--------------------------------------DP~G~~iel~~~~~--------~----------~~~i~hv  124 (258)
                      ++                                      ||+||.||++....        .          +.+|.||
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv  146 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGFVTGDQGLGHI  146 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCccccCCccccEE
Confidence            65                                      99999999996331        0          2378999


Q ss_pred             eEEecChhhHHHHHHHhcCCeEeeeecCC--cc-ceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChH
Q 025083          125 MLRVGDLGRSIKFYEKALGMKLLRTIDSP--EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  201 (258)
Q Consensus       125 ~l~v~d~~~s~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~  201 (258)
                      .|.|+|+++|.+||+++|||++......+  ++ .+..+++.+++.  ++.+.+...      +...+++|++|.|+|++
T Consensus       147 ~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~--~~~~~l~~~------~~~~~~~Hiaf~v~d~~  218 (286)
T TIGR03213       147 VLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER--HHSLAFAAG------PSEKRLNHLMLEVDTLD  218 (286)
T ss_pred             EEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC--cceEEEecC------CCCCceEEEEEEcCCHH
Confidence            99999999999999999999987653221  11 123556665432  444444311      12357999999999976


Q ss_pred             HHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          202 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       202 ~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      ++ .++.++|+++|+ +...|++++.+..+++||+||+|++||+...
T Consensus       219 ~v-~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       219 DV-GLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             HH-HHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecC
Confidence            53 333345589999 6666766655556889999999999999863

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>PLN02367 lactoylglutathione lyase

Probab=99.87  E-value=4.5e-21  Score=152.53  Aligned_cols=130  Identities=32%  Similarity=0.585  Sum_probs=104.9

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCC---------------CceeEEEEEEecCCc
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE---------------DQTTVLELAYSYGVT  182 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~  182 (258)
                      .-.+.|++|+|+|+++|++||+++|||++..+...++.++.++|+++++.               .....|+|.++++..
T Consensus        73 ~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e  152 (233)
T PLN02367         73 GYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTE  152 (233)
T ss_pred             CcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCC
Confidence            45789999999999999999999999999998888877888898865331               113578998877643


Q ss_pred             c------cccC----CceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhhh
Q 025083          183 E------YTKG----NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  252 (258)
Q Consensus       183 ~------~~~~----~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  252 (258)
                      .      +..+    .|++||+|.|+|+++++++|    +++|+++..+|....  ..+++||+||||++|||++.....
T Consensus       153 ~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL----~a~Gv~~v~~P~~g~--~~riaFIkDPDGn~IEL~e~~~~~  226 (233)
T PLN02367        153 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGVEFVKKPNDGK--MKGIAFIKDPDGYWIEIFDLKTIG  226 (233)
T ss_pred             ccccchhcccCCCCCCCceEEEEEcCCHHHHHHHH----HHCCCEEEeCCccCC--ceEEEEEECCCCCEEEEEeccccc
Confidence            1      3333    38999999999999999999    899999998775432  257889999999999999987554


Q ss_pred             H
Q 025083          253 K  253 (258)
Q Consensus       253 ~  253 (258)
                      +
T Consensus       227 ~  227 (233)
T PLN02367        227 T  227 (233)
T ss_pred             c
Confidence            3

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.86  E-value=1.1e-19  Score=144.89  Aligned_cols=167  Identities=23%  Similarity=0.319  Sum_probs=118.5

Q ss_pred             CcccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCC-cccCCCCee
Q 025083           16 WPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT-SYDIGTGFG   94 (258)
Q Consensus        16 ~~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~~   94 (258)
                      +..+..+.+.-|.|.|+||+++..||+++||+++..+..      +.+-++.++  . ..+.|....... +.....|+.
T Consensus         3 ~~~~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg--~-~LL~L~q~~~a~~~~~~~aGLy   73 (265)
T COG2514           3 FALTTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGG--T-PLLTLEQFPDARRPPPRAAGLY   73 (265)
T ss_pred             cccCCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCC--E-EEEEEEeCCCCCCCCcccccee
Confidence            345567889999999999999999999999999987643      233345433  2 345555433322 223456999


Q ss_pred             eEEEEcCC---------------------------------CCCCcEEEEEECCC-------------------------
Q 025083           95 HLAIATED---------------------------------DPDGYIFELIQRGP-------------------------  116 (258)
Q Consensus        95 hia~~v~d---------------------------------DP~G~~iel~~~~~-------------------------  116 (258)
                      |+||.+|+                                 ||+||.||++.+.+                         
T Consensus        74 H~AfLlP~r~~L~~~l~hl~~~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~ld~~~ll~  153 (265)
T COG2514          74 HTAFLLPTREDLARVLNHLAEEGIPLVGASDHLVSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEPLDVEALLE  153 (265)
T ss_pred             eeeeecCCHHHHHHHHHHHHhcCCcccccCcchhheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccccCHHHHhh
Confidence            99999998                                 99999999997731                         


Q ss_pred             -----------CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEE--EEecCCcc
Q 025083          117 -----------TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLEL--AYSYGVTE  183 (258)
Q Consensus       117 -----------~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l--~~~~~~~~  183 (258)
                                 ....|.||.|.|.|++++.+||+++|||+...+..      ...|+..+++  |+.+.+  ........
T Consensus       154 ~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~Y--HHHia~N~W~s~~~~~  225 (265)
T COG2514         154 EATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDY--HHHLAANTWNSRGARP  225 (265)
T ss_pred             hccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCc--ceeEEEeccccCCCCC
Confidence                       13578999999999999999999999999988732      4578887776  444443  22211111


Q ss_pred             c-ccCCceeeEEEEECC
Q 025083          184 Y-TKGNAYAQVAISTDD  199 (258)
Q Consensus       184 ~-~~~~g~~hi~~~v~d  199 (258)
                      . ....|+..+.+.+++
T Consensus       226 ~~~~~~GLa~~~i~~~~  242 (265)
T COG2514         226 RNANASGLAWLEIHTPD  242 (265)
T ss_pred             CCCCCCCcceEEEEcCC
Confidence            1 122367777777777

>PRK10291 glyoxalase I; Provisional

Probab=99.85  E-value=2.6e-20  Score=138.10  Aligned_cols=123  Identities=47%  Similarity=0.849  Sum_probs=92.8

Q ss_pred             eEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHHH
Q 025083          125 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  204 (258)
Q Consensus       125 ~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~  204 (258)
                      +|.|+|+++|++||+++|||++......++..+.++++..++......+++..+....++..+.++.|++|.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            47899999999999999999987765555555667777655432344566654433223344568999999999999999


Q ss_pred             HHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          205 EVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       205 ~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                      ++|    +++|+++..+|.+.+++..+++||+||||++|||++..+.
T Consensus        81 ~~l----~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~  123 (129)
T PRK10291         81 EKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  123 (129)
T ss_pred             HHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcccc
Confidence            888    8999999877665555444678899999999999987643

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.85  E-value=8.1e-20  Score=139.05  Aligned_cols=132  Identities=45%  Similarity=0.815  Sum_probs=98.3

Q ss_pred             CCCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEE
Q 025083          116 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  195 (258)
Q Consensus       116 ~~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~  195 (258)
                      ....++.|+.|.|+|+++|.+||+++|||++..+...+...+...+++.+.......+++.......+...+.+..|++|
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~f   92 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAI   92 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEEE
Confidence            34678999999999999999999999999987655444333445566544322334555544332222333458899999


Q ss_pred             EECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          196 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       196 ~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                      .|+|++++.++|    .++|+++..+|.+.+++..+++||+||||++|||++....
T Consensus        93 ~v~dld~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  144 (150)
T TIGR00068        93 GVDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKST  144 (150)
T ss_pred             ecCCHHHHHHHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCch
Confidence            999999999999    8999999888766555455788999999999999987643

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.83  E-value=1.7e-19  Score=140.75  Aligned_cols=129  Identities=31%  Similarity=0.594  Sum_probs=99.1

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCC---------------ceeEEEEEEecCCc
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED---------------QTTVLELAYSYGVT  182 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~  182 (258)
                      ..++.|++|+|.|+++|++||+++|||++..+...++.++.+++++.+...               ....|+|..+....
T Consensus        25 ~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~  104 (185)
T PLN03042         25 GYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTE  104 (185)
T ss_pred             CcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCc
Confidence            467999999999999999999999999998887666666777887643210               13478887654322


Q ss_pred             c------cc----cCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhhh
Q 025083          183 E------YT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  252 (258)
Q Consensus       183 ~------~~----~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  252 (258)
                      .      +.    .+.|+.||+|.|+|+++++++|    +++|+++...|..  +...+++||+||||++|||++.....
T Consensus       105 ~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L----~~~Gv~v~~~p~~--~~~~~~~fi~DPdG~~IEl~e~~~~~  178 (185)
T PLN03042        105 SDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKLGVEFVKKPDD--GKMKGLAFIKDPDGYWIEIFDLKRIG  178 (185)
T ss_pred             ccccccccccCCCCCCCccEEEEEcCCHHHHHHHH----HHCCCeEEeCCcc--CCceeEEEEECCCCCEEEEEECCCch
Confidence            1      21    1248999999999999999999    8999999876643  22246788999999999999987544

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=5.3e-19  Score=129.53  Aligned_cols=114  Identities=31%  Similarity=0.548  Sum_probs=85.2

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCc-----------cceeEEEeeecCCCceeEEEEEEecCCcccccCC
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----------LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGN  188 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~  188 (258)
                      ++.|++|+|+|+++|++||+++|||++..+..+++           +.+..+++...++..+..++|..+++..++..|.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            68899999999999999999999999887665554           3344455654333346789998877655555555


Q ss_pred             ceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          189 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       189 g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      +  |++|.|++. ++.++|    +++|+++...|.       .++|++||||+.|||+.
T Consensus        82 ~--~~hlav~~~-d~~~~l----~~~Gv~~~~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 D--FLGITIHSK-QAVSNA----KKHNWPVTEVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             C--EEEEEEECH-HHHHHH----HHCCCceecCCC-------CEEEEECCCCCEEEEec
Confidence            5  566666665 455777    899999875432       28899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.82  E-value=1e-18  Score=127.63  Aligned_cols=120  Identities=43%  Similarity=0.742  Sum_probs=90.1

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCC-cccccCCceeeEEEEECC
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV-TEYTKGNAYAQVAISTDD  199 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~g~~hi~~~v~d  199 (258)
                      +.|+.|.|+|++++.+||+++|||+.......++.++..+++..+....+..+++...... .+...+.+..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5799999999999999999999999877644333345556666543112455666544322 122334578999999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEE
Q 025083          200 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  246 (258)
Q Consensus       200 ~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  246 (258)
                      ++++++++    +++|+++..+|...  .+++++||+|||||+|||+
T Consensus        81 id~~~~~l----~~~G~~~~~~~~~~--~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERL----EEMGVEVTKPPGDG--GMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHH----HHCCCEEeeCCccC--CCceEEEEECCCCCEEEeC
Confidence            99999999    89999999887654  3457899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PLN02300 lactoylglutathione lyase

Probab=99.81  E-value=1.2e-18  Score=146.44  Aligned_cols=130  Identities=45%  Similarity=0.787  Sum_probs=100.4

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      ...++.|+.|.|+|+++|++||+++|||+...+...+...+...++..++...+..+++...........+.++.|++|.
T Consensus        21 ~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hia~~  100 (286)
T PLN02300         21 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIA  100 (286)
T ss_pred             ccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEEEEE
Confidence            46789999999999999999999999999876654444445566666544333556677544333223345689999999


Q ss_pred             ECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          197 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       197 v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      |+|++++++++    +++|+++..+|.+.++++.+++||+|||||.|||++...
T Consensus       101 v~dvd~~~~~l----~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  150 (286)
T PLN02300        101 VEDVAKTVELV----KAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGP  150 (286)
T ss_pred             eCCHHHHHHHH----HHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Confidence            99999999999    899999998887766555678899999999999998753

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=2.1e-18  Score=129.90  Aligned_cols=122  Identities=18%  Similarity=0.244  Sum_probs=88.7

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCc-----------cceeEEEeeecCCCceeEEEEEEecCCcc----
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----------LKCALAMLGYAEEDQTTVLELAYSYGVTE----  183 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----  183 (258)
                      .+++||+|.|+|+++|++||++ |||++..+....+           .+..++++..+.  ....++|.....+..    
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--g~~~iel~~~~~~~~~~~~   78 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPD--GHSRLELSKFHHPAVIADH   78 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCC--CCceEEEEEecCCCCcCcC
Confidence            4689999999999999999998 9998765432211           123445554322  245677766432211    


Q ss_pred             ---cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          184 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       184 ---~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                         ...+.|+.||+|.|+|+++++++|    +++|+++..+|.... .+.+++||+||||+.|||++.
T Consensus        79 ~~~~~~~~g~~hia~~v~d~d~~~~~l----~~~G~~~~~~~~~~~-~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          79 RPAPVNALGLRRVMFAVDDIDARVARL----RKHGAELVGEVVQYE-NSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHH----HHCCCceeCCceecC-CCeEEEEEECCCCCEEEeeec
Confidence               112447899999999999999999    899999987664433 245889999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.80  E-value=5.7e-19  Score=134.73  Aligned_cols=122  Identities=20%  Similarity=0.184  Sum_probs=86.9

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCC-ccceeEEEeeecCCC---ceeEEEEEEecCCcccccCCceeeEEE
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-ELKCALAMLGYAEED---QTTVLELAYSYGVTEYTKGNAYAQVAI  195 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~l~l~~~~~~~~~~~~~g~~hi~~  195 (258)
                      +|.||+|.|+|+++|++||+++|||++......+ ..+....++..++..   .++.+.+..       ..+.+++||+|
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            5889999999999999999999999987654332 122345666653210   011122211       11468999999


Q ss_pred             EECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          196 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       196 ~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      .|+|++++. ++.++|+++|+++.++|+++..+...++|++|||||+|||+...
T Consensus        74 ~v~die~~~-~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          74 EVHDFDAQG-LGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             EcCCHHHHH-HHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            999998775 22234499999999888877654556789999999999998654

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.80  E-value=2.7e-18  Score=129.54  Aligned_cols=121  Identities=12%  Similarity=0.123  Sum_probs=86.1

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccc-eeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK-CALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      ..+++|++|.|+|+++|.+||+++|||++..+...+++. ....++..+.  .++.+.+...       .+.+++|++|.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~--~~h~~~~~~~-------~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSN--KPHDIAFVGG-------PDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCC--CcceEEEecC-------CCCCceEEEEE
Confidence            457999999999999999999999999987664322222 2234554433  2344444211       13579999999


Q ss_pred             ECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          197 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       197 v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      |+|++++. ++.++++++|+++..+|.++..+.++++||+|||||+|||+..
T Consensus        75 v~d~~~l~-~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVL-KAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHH-HHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            99987653 3335558999999877765543345789999999999999753

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.80  E-value=2.8e-18  Score=128.38  Aligned_cols=122  Identities=20%  Similarity=0.204  Sum_probs=90.9

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc------cccCCceeeEE
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE------YTKGNAYAQVA  194 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~g~~hi~  194 (258)
                      ++|+.|.|+|+++|.+||+++|||++..+...+  +..+.++..+    ...+.+........      ...+.+..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQG----DINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcC----CEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            589999999999999999999999988764332  1233444422    34455543221111      12345889999


Q ss_pred             EEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhhhH
Q 025083          195 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  253 (258)
Q Consensus       195 ~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  253 (258)
                      |.|+|+++.++++    +++|+++..+|...+ ++.++++++||||+.|||++....++
T Consensus        75 ~~V~Dvda~~~~l----~~~G~~v~~~p~~~~-~~~~~~~i~dp~G~~ie~~~~~~~~~  128 (136)
T cd08342          75 FRVDDAAAAYERA----VARGAKPVQEPVEEP-GELKIAAIKGYGDSLHTLVDRKGYKG  128 (136)
T ss_pred             EEeCCHHHHHHHH----HHcCCeEccCceecC-CeEEEEEEeccCCcEEEEEecCCCCC
Confidence            9999999999999    899999998887644 35689999999999999999876544

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.79  E-value=6.3e-18  Score=126.16  Aligned_cols=122  Identities=20%  Similarity=0.174  Sum_probs=89.2

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      +.++.|+.|.|+|+++|.+||+++|||++......     ...++..+....++.+.+.....     ...++.|++|.|
T Consensus         1 ~~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~-----~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v   70 (134)
T cd08360           1 PRRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG-----RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEV   70 (134)
T ss_pred             CceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC-----cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEe
Confidence            35789999999999999999999999998765421     23455543222345565543211     136899999999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      +|++++. ++.++|+++|+++..+|..++.++..++||+||+|++|||+....
T Consensus        71 ~d~~~~~-~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          71 GDIDEVM-LGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             CCHHHHH-HHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence            9987665 444555999999987776665545577999999999999986543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.78  E-value=4.8e-17  Score=140.43  Aligned_cols=190  Identities=22%  Similarity=0.337  Sum_probs=126.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc------ccCCCCeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS------YDIGTGFGH   95 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~h   95 (258)
                      ++++||.+.|+|++++++||++.||+++........+. ....+..    +...++|..+.....      ...++++.|
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~----G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~   75 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQ----GQINFVLTAPYSSDSPAADFAAKHGDGVKD   75 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEe----CCEEEEEecCCCCCchHHHHHHhCCCceEE
Confidence            47899999999999999999999999987653222222 2222332    235677765443221      124678999


Q ss_pred             EEEEcCC--------------------CC-------------CCcEEEEEECCC-------------------------C
Q 025083           96 LAIATED--------------------DP-------------DGYIFELIQRGP-------------------------T  117 (258)
Q Consensus        96 ia~~v~d--------------------DP-------------~G~~iel~~~~~-------------------------~  117 (258)
                      +||.|+|                    ++             .|..+-++++..                         .
T Consensus        76 iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (353)
T TIGR01263        76 VAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVG  155 (353)
T ss_pred             EEEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccccccccccccCCCCCC
Confidence            9999999                    33             233344554310                         0


Q ss_pred             CCCceeeeEEec--ChhhHHHHHHHhcCCeEeeeecCCc--cceeEEEeeecCCCceeEEEEEEecC---Cc------cc
Q 025083          118 PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYG---VT------EY  184 (258)
Q Consensus       118 ~~~i~hv~l~v~--d~~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~---~~------~~  184 (258)
                      ..+++||++.|+  |++++..||+++|||+.........  .+.....+..+.  ....++|.....   ..      ..
T Consensus       156 ~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~--g~~~i~L~ep~~~~~~s~i~~fl~~  233 (353)
T TIGR01263       156 LIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPD--GKVKIPLNEPASGKDKSQIEEFLEF  233 (353)
T ss_pred             eEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCC--CcEEEEEeccCCCCCCCHHHHHHHH
Confidence            124899999999  9999999999999999876543211  122222222211  245667665311   11      12


Q ss_pred             ccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCC
Q 025083          185 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  222 (258)
Q Consensus       185 ~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p  222 (258)
                      ..|.|++||||.|+|+++.+++|    +++|+++...|
T Consensus       234 ~~g~Gv~HiAf~vdDi~~~~~~l----~~~Gv~~l~~P  267 (353)
T TIGR01263       234 YNGAGVQHIALNTDDIVRTVRAL----RARGVEFLDTP  267 (353)
T ss_pred             cCCCCccEEEEEcCCHHHHHHHH----HHcCCccCcCC
Confidence            24679999999999999999999    89999988776

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PRK11478 putative lyase; Provisional

Probab=99.78  E-value=8.5e-18  Score=124.35  Aligned_cols=121  Identities=21%  Similarity=0.179  Sum_probs=83.1

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCc-cceeEEEeeecCCCceeEEEEEEecCCcc---cccCCceeeEE
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVTE---YTKGNAYAQVA  194 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~g~~hi~  194 (258)
                      .+++||.|.|+|+++|.+||+++|||++......+. ..+.. .+..+.   ...+++.....+..   .....|+.|++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~~---~~~l~l~~~~~~~~~~~~~~~~g~~hi~   80 (129)
T PRK11478          5 KQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKG-DLALNG---QYVIELFSFPFPPERPSRPEACGLRHLA   80 (129)
T ss_pred             ceecEEEEEcCCHHHHHHHHHHHhCCEeccccccccccccee-eEecCC---CcEEEEEEecCCCCCCCCCCCCceeEEE
Confidence            568999999999999999999999999764321111 11211 122211   34566654322111   12234789999


Q ss_pred             EEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          195 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       195 ~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      |.|+|+++++++|    +++|+++...+. .+..+.+++||+|||||.|||++.
T Consensus        81 f~v~d~~~~~~~l----~~~G~~~~~~~~-~~~~g~~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         81 FSVDDIDAAVAHL----ESHNVKCEAIRV-DPYTQKRFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             EEeCCHHHHHHHH----HHcCCeeecccc-CCCCCCEEEEEECCCCCEEEEEeC
Confidence            9999999999988    889999864332 222345889999999999999863

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.78  E-value=7.1e-18  Score=129.86  Aligned_cols=125  Identities=20%  Similarity=0.184  Sum_probs=87.3

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeee----cC--------------CccceeEEEeeecCCCceeEEEEEEecC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTI----DS--------------PELKCALAMLGYAEEDQTTVLELAYSYG  180 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~l~l~~~~~  180 (258)
                      .+++||+|.|+|+++|++||+++|||++..+.    ..              ....+.++++..++   ...++|.....
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~~   79 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFKN   79 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEeccC
Confidence            56899999999999999999999999875321    10              01124456665433   34577766543


Q ss_pred             Ccc-c----ccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCC-ccC-CCC-CeeEEEEECCCCCEEEEEcchh
Q 025083          181 VTE-Y----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP-GPI-PGL-NTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       181 ~~~-~----~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p-~~~-~~~-~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      +.. .    ..+.|..|++|.|+|++++++++    +++|+++..++ ... ++. ..+++||+|||||.|||++...
T Consensus        80 ~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        80 QENPEDNFEYWKTGVFHFCVQDPDVEGLAERI----VAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCcccccccccceEEEEEcCCHHHHHHHH----HHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            221 1    12358999999999999999999    88998765432 211 111 2378999999999999998763

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=9.5e-18  Score=123.13  Aligned_cols=119  Identities=19%  Similarity=0.248  Sum_probs=81.8

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc---cccCCceeeEEEE
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE---YTKGNAYAQVAIS  196 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~g~~hi~~~  196 (258)
                      ++.|+.|.|+|+++|++||+++|||+...+...+..++...++..++   ...+++.......+   .....|+.|++|.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            57899999999999999999999999765433322334445555432   34566654322111   1123478999999


Q ss_pred             ECC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEE
Q 025083          197 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  246 (258)
Q Consensus       197 v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  246 (258)
                      |+|   +++++++|    +++|+++..+|...+. +.+.++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l----~~~g~~~~~~~~~~~~-g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERL----RADGYLIIGEPRTTGD-GYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHH----HHCCCEEEeCceecCC-CeEEEEEECCCCCEEEeC
Confidence            976   55555555    8999999876654332 335577999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.77  E-value=1.4e-17  Score=125.10  Aligned_cols=115  Identities=13%  Similarity=0.186  Sum_probs=85.7

Q ss_pred             eeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChH
Q 025083          122 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  201 (258)
Q Consensus       122 ~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~  201 (258)
                      .||.|.|+|+++|++||+++|||++..+...     ..+++...+...++.+.+..       ....+++|++|.|+|.+
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCCHH
Confidence            4899999999999999999999998776421     34666643322234443321       12358999999999865


Q ss_pred             HHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          202 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       202 ~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      + ++++.++++++|+++..+|+.++.++.+++||+||+|+.|||+...
T Consensus        69 ~-v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  115 (141)
T cd07258          69 D-IGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGM  115 (141)
T ss_pred             H-HHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCc
Confidence            3 3455566699999999888877655668899999999999998654

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.76  E-value=3.3e-17  Score=125.15  Aligned_cols=125  Identities=17%  Similarity=0.146  Sum_probs=89.3

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCC---ccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeE
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP---ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV  193 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi  193 (258)
                      ...+|.||.|.|+|++++.+||+++|||++.......   +.+...+++..+.  .++.+.+...      ..+.+++|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~i~~~~~------~~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNG--RHHSLALAEG------PGPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCC--CCCCEEEEcC------CCCceeEEE
Confidence            3578999999999999999999999999986543221   1133456666533  2344444322      123589999


Q ss_pred             EEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          194 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       194 ~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      +|.|+|++++ +.+.++|+++|+++..+|..++.++.+++|++||+|++|||+....
T Consensus        78 af~V~d~~~l-~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~  133 (154)
T cd07237          78 MLEVTSLDDV-GRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGR  133 (154)
T ss_pred             EEEcCCHHHH-HHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCce
Confidence            9999986543 2333444999999988877665555688999999999999986643

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=4.4e-17  Score=119.38  Aligned_cols=120  Identities=24%  Similarity=0.284  Sum_probs=83.9

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCc-cceeEEEeeecCCCceeEEEEEEecCCcc---cccCCceeeEE
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVTE---YTKGNAYAQVA  194 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~g~~hi~  194 (258)
                      .+++|++|.|.|++++.+||+++|||+.......++ ..+.+ .+..++   ...+++........   ...+.|.+|++
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~~~---~~~i~l~~~~~~~~~~~~~~~~g~~h~~   77 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLLNG---GYQLELFSFPNPPERPSYPEACGLRHLA   77 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEecCC---CcEEEEEEcCCCCCCCCCCcCCCceEEE
Confidence            478999999999999999999999999876532222 22222 222211   23455543222111   12345889999


Q ss_pred             EEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          195 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       195 ~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      |.|+|++++.+++    +++|+++...|... ..+.+++|++||+|++|||++
T Consensus        78 ~~v~d~~~~~~~l----~~~G~~~~~~~~~~-~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHL----KAKGVEVEPIRVDE-FTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHH----HHcCCccccccccC-CCceEEEEEECCCCCEEEecC
Confidence            9999999999888    89999987755332 234578999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.76  E-value=4.5e-17  Score=125.35  Aligned_cols=122  Identities=20%  Similarity=0.223  Sum_probs=82.3

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      +.+|.||.|.|+|+++|++||+++|||++......+.+.....++....  ..+.+.+..       ..+.++.|++|.|
T Consensus         1 ~~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~--~~~~i~l~~-------~~~~~~~Hiaf~v   71 (161)
T cd07256           1 PQRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKG--GVHDTALTG-------GNGPRLHHVAFWV   71 (161)
T ss_pred             CceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCC--CcceEEEec-------CCCCceeEEEEEc
Confidence            4679999999999999999999999999875543322222344554322  234444321       1235789999999


Q ss_pred             CChHHHHHHHHHHHHHhCCe--eecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          198 DDVYKSAEVVNLVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +|.++ ++++.++|+++|++  +..+|+.+...+.+++||+|||||.|||++..
T Consensus        72 ~~~~~-v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          72 PEPHN-IIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CCHHH-HHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            98443 33344555899986  33445544333456899999999999998654

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.75  E-value=3.5e-17  Score=119.98  Aligned_cols=116  Identities=22%  Similarity=0.171  Sum_probs=79.7

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.|+.|.|+|+++|.+||+++|||++.....  ++   .+++.......++.+.+..       ....+..|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~~-------~~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG---RVYLKAWDEFDHHSIVLRE-------ADTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc---eEEEEccCCCcccEEEecc-------CCCCCeeEEEEEe
Confidence            3578999999999999999999999999876531  11   1233322111234444421       1134788999999


Q ss_pred             CC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          198 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       198 ~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      ++   ++++.+++    +++|+++...|.....+.++.+||+|||||+|||+...
T Consensus        70 ~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          70 LDDADLEKLEARL----QAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CCHHHHHHHHHHH----HHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            85   44445555    99999988765433333357899999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.74  E-value=9.3e-17  Score=116.16  Aligned_cols=114  Identities=25%  Similarity=0.237  Sum_probs=82.7

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECCh
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  200 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~  200 (258)
                      +.|++|.|+|+++|++||+++||+++..... ...  ..+++..++   ...+.+.......  .......|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~--~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGG--DYAVFSTGG---GAVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCC--ceEEEEeCC---ccEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            5799999999999999999999999876542 112  233444332   1223333222111  1234677899999999


Q ss_pred             HHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          201 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       201 ~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      +++++++    +++|+++..+|...++ .++.++|+|||||.|+|++
T Consensus        73 ~~~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARV----EAAGGKVLVPPTDIPG-VGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHH----HHCCCEEEeCCcccCC-cEEEEEEECCCCCEEEeEC
Confidence            9999888    8999999988876553 4589999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.74  E-value=1.2e-16  Score=119.92  Aligned_cols=117  Identities=24%  Similarity=0.288  Sum_probs=83.5

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.|+.|.|+|+++|.+||+++|||++..+..      ..+++..+    ...+.+...........+.++.|++|.+
T Consensus         2 i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~----g~~l~l~~~~~~~~~~~~~~~~hiaf~v   71 (139)
T PRK04101          2 LKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN----GLWIALNEEKDIPRNEIHQSYTHIAFSI   71 (139)
T ss_pred             CCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC----CeEEEeeccCCCCCccCCCCeeEEEEEe
Confidence            4579999999999999999999999999875421      23344432    2344443221111112234688999999


Q ss_pred             C--ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          198 D--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       198 ~--d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +  |++++++++    +++|+++..+|...+. +++.+||+|||||+|||.+..
T Consensus        72 ~~~dv~~~~~~l----~~~G~~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         72 EEEDFDHWYQRL----KENDVNILPGRERDER-DKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             cHHHHHHHHHHH----HHCCceEcCCccccCC-CceEEEEECCCCCEEEEEeCC
Confidence            7  777777777    8999998876655433 458999999999999998765

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.74  E-value=5.2e-17  Score=119.78  Aligned_cols=119  Identities=23%  Similarity=0.360  Sum_probs=84.3

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCc-c---c--ccCCceeeE
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-E---Y--TKGNAYAQV  193 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~---~--~~~~g~~hi  193 (258)
                      ++.|+.|.|+|++++.+||+++|||+.......+..++...++..+    ...++|....... .   +  ..+.+..|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG----NTKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC----CEEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            5789999999999999999999999987543333333455555543    2345665432211 1   0  124578899


Q ss_pred             EEEECChHHHHHHHHHHHHHhCCeeecC-CccCCCCCeeEEEE--ECCCCCEEEEEc
Q 025083          194 AISTDDVYKSAEVVNLVTQELGGKITRQ-PGPIPGLNTKITSF--VDPDGWKTVLVD  247 (258)
Q Consensus       194 ~~~v~d~~~~~~~l~~~~~~~G~~i~~~-p~~~~~~~~~~~~~--~DPdG~~iel~~  247 (258)
                      +|.|+|+++++++|    +++|+++..+ |...++ +.+.+|+  +||||+.||+++
T Consensus        77 ~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETL----KEKGVRLIDEEPRIGAG-GKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHH----HHCCCcccCCCCccCCC-CCEEEEecccccCcEEEEecC
Confidence            99999999999998    8899998764 433222 3456666  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.72  E-value=3e-16  Score=116.53  Aligned_cols=118  Identities=24%  Similarity=0.242  Sum_probs=84.0

Q ss_pred             eeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChH
Q 025083          122 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  201 (258)
Q Consensus       122 ~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~  201 (258)
                      +||.|.|+|++++.+||+++|||++......+ +.....++..+.  .++.+.+....      ...++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDE--DHHDLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCC--CcceEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            49999999999999999999999987654432 223445555433  23445543211      1458999999999975


Q ss_pred             HHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          202 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       202 ~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      + ++.+.++++++|+++..+|...+.+..++++|+||||+.|||++..
T Consensus        72 ~-~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~  118 (131)
T cd08343          72 D-ILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEM  118 (131)
T ss_pred             H-HHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCC
Confidence            3 2223334489999998877655544457889999999999998765

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.72  E-value=2.3e-16  Score=119.08  Aligned_cols=118  Identities=19%  Similarity=0.299  Sum_probs=85.0

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      +.++.|+.|.|+|++++++||+++|||++.....    . ...++..+..  ++.+.+...       ...++.|++|.|
T Consensus         2 ~~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~----~-~~~~l~~~~~--~~~~~l~~~-------~~~~~~hiaf~v   67 (144)
T cd07239           2 PVKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG----D-QMAFLRCNSD--HHSIAIARG-------PHPSLNHVAFEM   67 (144)
T ss_pred             CceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC----C-eEEEEECCCC--cceEEEccC-------CCCceEEEEEEC
Confidence            3478999999999999999999999999865431    1 2345554432  344544311       134788999999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      +|++++. ++.++++++|+++..+|.....+..+++||+||+||.|||++...
T Consensus        68 ~d~~~l~-~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          68 PSIDEVM-RGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CCHHHHH-HHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            9977654 333455999999987765443334577899999999999987653

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.72  E-value=3.3e-16  Score=121.07  Aligned_cols=124  Identities=19%  Similarity=0.124  Sum_probs=83.9

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..+|.|+.|.|+|++++.+||+++|||++........+.....++....  ....+.+...  .  .....+++|++|.|
T Consensus         4 i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~--~--~~~~~~~~hiaf~v   77 (166)
T cd09014           4 VRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSN--KVHDVAYTRD--P--AGARGRLHHLAYAL   77 (166)
T ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCC--CceeEEEecC--C--CCCCCCceEEEEEC
Confidence            3578999999999999999999999999876543332222334554322  1333433221  1  11224689999999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +|.+++ +.+.++++++|+++..+|..+......++||+|||||+|||+..
T Consensus        78 ~~~~~l-~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          78 DTREDV-LRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             CCHHHH-HHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            986533 23334448999998877765543334578999999999999877

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.72  E-value=3.2e-16  Score=114.68  Aligned_cols=115  Identities=20%  Similarity=0.160  Sum_probs=79.2

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.|+.|.|+|+++|.+||+++|||++..+..      ..+++...+....+.+.+...       ...++.|++|.|
T Consensus         4 i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af~v   70 (121)
T cd09013           4 IAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------PEAGLGHIAWRA   70 (121)
T ss_pred             ccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------CCCceEEEEEEc
Confidence            3578999999999999999999999999876532      124444322212444544321       134789999999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      ++. +.++++.++++++|+++...+... + .+..+||+|||||+||++..
T Consensus        71 ~~~-~~v~~~~~~l~~~G~~~~~~~~~~-~-~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          71 SSP-EALERRVAALEASGLGIGWIEGDP-G-HGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             CCH-HHHHHHHHHHHHcCCccccccCCC-C-CcceEEEECCCCCEEEEEEe
Confidence            873 334444455599999875433222 2 24678999999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.72  E-value=3.6e-16  Score=114.75  Aligned_cols=123  Identities=18%  Similarity=0.205  Sum_probs=80.5

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCcc-ceeEEEeeecCCCceeEEEEEEecCCcc--cccCCceeeEEEE
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-KCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAIS  196 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hi~~~  196 (258)
                      ++.||+|.|.|++++.+||+++|||+........+. .....++.......+..++|........  .....+..|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            478999999999999999999999998766532221 1122333322111245666654432211  1122368899999


Q ss_pred             ECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEE
Q 025083          197 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  246 (258)
Q Consensus       197 v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  246 (258)
                      |+|. +.++++.++++++|+++..++..   .+.+.+||+||+||+|||+
T Consensus        81 v~~~-~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSE-ASLDAWRERLRAAGVPVSGVVDH---FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCH-HHHHHHHHHHHHcCCcccceEee---cceEEEEEECCCCCEEEeC
Confidence            9963 22344445559999998754332   2458899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.71  E-value=2.4e-16  Score=117.12  Aligned_cols=117  Identities=22%  Similarity=0.239  Sum_probs=79.6

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECC-
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD-  199 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d-  199 (258)
                      |+||.|.|+|++++++||+++|||++.....      ...++..+    ...+.+.............++.|++|.|++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIG----GTWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeC----ceEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            6899999999999999999999998765321      11233332    234444332211111123478899999975 


Q ss_pred             -hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhhh
Q 025083          200 -VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  252 (258)
Q Consensus       200 -~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  252 (258)
                       +++++++|    +++|+++..+|..... .++.+||+|||||+|||.+.....
T Consensus        71 dld~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~~~~~  119 (131)
T cd08363          71 EFDAFYTRL----KEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTGTLAE  119 (131)
T ss_pred             HHHHHHHHH----HHcCCcccCCCccccC-cceEEEEECCCCCEEEEecCcHHH
Confidence             66666666    8999998755433322 458899999999999999876443

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.71  E-value=4e-16  Score=114.58  Aligned_cols=112  Identities=17%  Similarity=0.211  Sum_probs=79.6

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.|+.|.|+|+++|++||+++|||+.....    +.+  ..+..++   +..+.+...      ....+..|++|.|
T Consensus         2 ~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~--~~~~~~~---~~~l~~~~~------~~~~~~~h~a~~v   66 (123)
T cd08351           2 TVTLNHTIVPARDREASAEFYAEILGLPWAKPF----GPF--AVVKLDN---GVSLDFAQP------DGEIPPQHYAFLV   66 (123)
T ss_pred             cceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCE--EEEEcCC---CcEEEEecC------CCCCCcceEEEEe
Confidence            457899999999999999999999999886632    112  1222222   334544321      1123567999999


Q ss_pred             C--ChHHHHHHHHHHHHHhCCeeecCCccC------CCCCeeEEEEECCCCCEEEEEcc
Q 025083          198 D--DVYKSAEVVNLVTQELGGKITRQPGPI------PGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~--d~~~~~~~l~~~~~~~G~~i~~~p~~~------~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +  |+++++++|    +++|+++..+|...      ...+++.+||+|||||.|||++.
T Consensus        67 ~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          67 SEEEFDRIFARI----RERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             CHHHHHHHHHHH----HHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            7  477777777    89999997766432      12346899999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.71  E-value=3.5e-16  Score=114.40  Aligned_cols=116  Identities=14%  Similarity=0.165  Sum_probs=79.2

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .++.||+|.|+|+++|.+||+++|||+...+...     ..+++..++  .++.+.+...       ...+..|++|.++
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-----~~~~~~~~~--~~~~~~l~~~-------~~~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPED-----GALYLRMDD--RAWRIAVHPG-------EADDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCCC-----CeEEEEccC--CceEEEEEeC-------CCCceeEEEEEEC
Confidence            3689999999999999999999999987654211     134444432  2455555321       1247789999998


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccC--CCCCeeEEEEECCCCCEEEEEcch
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +.+ .++.+.++|+++|+++...|.+.  ..+.++++||+|||||.|||+...
T Consensus        67 ~~~-dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          67 DEA-ALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             CHH-HHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence            732 23333344499999998655321  222347899999999999998643

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.71  E-value=8e-17  Score=118.35  Aligned_cols=121  Identities=24%  Similarity=0.264  Sum_probs=81.3

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeec--CCccceeEEEeeecCCCceeEEEEEEecCCcccccC-----Cceee
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTID--SPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKG-----NAYAQ  192 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~-----~g~~h  192 (258)
                      +|+||+|.|+|++++++||+++|||++.....  .........++..+.  ..  +.+.....+.....+     .+..|
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~l~~~~~~~~~~~~~~~~~~~~~~   76 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE--GH--IELFLNPSPPPRASGHSFPEHGGHH   76 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS--SC--EEEEEEESSSSSSEEEHHHSHTSEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc--cc--eeeeeecccccccccccccccccee
Confidence            58999999999999999999999999988765  122223445555433  23  333333222211111     14567


Q ss_pred             EEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEE
Q 025083          193 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  245 (258)
Q Consensus       193 i~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  245 (258)
                      +++.+.+++++. ++.++|++.|+++..+|.....+...++|++||+|+.|||
T Consensus        77 i~~~~~~~~dl~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   77 IAFLAFDVDDLD-AAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEEEESSHHHHH-HHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEEEeccHHHHH-HHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            888887754433 3335669999999988876665555567899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.71  E-value=2.2e-16  Score=116.17  Aligned_cols=111  Identities=17%  Similarity=0.200  Sum_probs=79.1

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .+|.|+.|.|+|+++|.+||+++|||++..+..      ...++..+.  .++.+.+....        .+..|++|.|+
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~--~~~~i~l~~~~--------~~~~~iaf~v~   68 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDA--RDHTLVYIEGD--------PAEQASGFELR   68 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCC--ccEEEEEEeCC--------CceEEEEEEEC
Confidence            578999999999999999999999999765421      134555433  24445443211        35678999998


Q ss_pred             C---hHHHHHHHHHHHHHhCCeeecCCccCC--CCCeeEEEEECCCCCEEEEEcch
Q 025083          199 D---VYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       199 d---~~~~~~~l~~~~~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |   ++++.+++    +++|+++..++.+..  .+..+++||+|||||+|||+...
T Consensus        69 ~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          69 DDDALESAATEL----EQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             CHHHHHHHHHHH----HHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            7   55555555    999999877653211  22346789999999999998664

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.70  E-value=5.3e-16  Score=118.73  Aligned_cols=117  Identities=16%  Similarity=0.130  Sum_probs=81.4

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc-cccCCceeeEEEEEC
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAISTD  198 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~~v~  198 (258)
                      +++||.|.|+|+++|.+||+++|||++..+..   .  ...+...+. ..++.+.+........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            57899999999999999999999999876543   1  223333221 1256677765422111 122347899999999


Q ss_pred             C---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          199 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       199 d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |   +++++++|    +++|+++.. +...  +..+++||+|||||.|||++..
T Consensus        75 d~~dvd~~~~~L----~~~Gv~~~~-~~~~--~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERL----EALGLPVSG-IVDR--FYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHH----HHCCCCccc-cccc--ccEEEEEEECCCCcEEEEEECC
Confidence            8   56666666    899998643 3222  2357899999999999999765

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.70  E-value=8.7e-16  Score=114.09  Aligned_cols=119  Identities=16%  Similarity=0.181  Sum_probs=78.3

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccce-eEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKC-ALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      ..++.|+.|.|+|+++|++||+++|||+...+........ ...++..+    ...+.+.....    ....++.|++|.
T Consensus         2 i~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~----~~~~~~~Hiaf~   73 (131)
T cd08364           2 IEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIG----GLWIAIMEGDS----LQERTYNHIAFK   73 (131)
T ss_pred             cccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcC----CeEEEEecCCC----CCCCCceEEEEE
Confidence            4579999999999999999999999998765432110000 01112111    23445532211    122468999999


Q ss_pred             EC--ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          197 TD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       197 v~--d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |+  +++++.++|    +++|+++..+ .+...+.++.+||+|||||.|||....
T Consensus        74 v~~~~ld~~~~~l----~~~gv~~~~~-~~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          74 ISDSDVDEYTERI----KALGVEMKPP-RPRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             cCHHHHHHHHHHH----HHCCCEEecC-CccccCCceEEEEECCCCCEEEEecCC
Confidence            98  455555555    9999988643 222333468999999999999999664

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.70  E-value=4.3e-16  Score=113.92  Aligned_cols=114  Identities=24%  Similarity=0.188  Sum_probs=78.7

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.|+.|.|+|++++.+||+++|||++.....    .  .+++.......++.+.+...       ...+..|++|.|
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~v   68 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----D--RIYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFRV   68 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----C--eEEEEecCCCceEEEEEeeC-------CCCceeEEEEEC
Confidence            3578999999999999999999999999876532    1  23333211112344444211       124788999999


Q ss_pred             CC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          198 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      .+   ++++++++    +++|+++...|.....+.++++|+.|||||+|||+..
T Consensus        69 ~~~~dv~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          69 RSEEDLDKAEAFF----QELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             CCHHHHHHHHHHH----HHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            64   55555555    8999998776443333345789999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=7.6e-16  Score=112.78  Aligned_cols=117  Identities=22%  Similarity=0.332  Sum_probs=82.8

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCC---cccccCCceeeEEE
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV---TEYTKGNAYAQVAI  195 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~g~~hi~~  195 (258)
                      .+++|+.|.|+|++++.+||+++|||+........  .+  ..+..+    ...+.+......   .....+.+..|++|
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~hi~~   73 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GR--KALRFG----SQKINLHPVGGEFEPAAGSPGPGSDDLCL   73 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeecccccC--Cc--eEEEeC----CEEEEEecCCCccCcCccCCCCCCceEEE
Confidence            46899999999999999999999999987654321  12  223322    134555432211   11123457899999


Q ss_pred             EECC-hHHHHHHHHHHHHHhCCeeecCCccCCC--CCeeEEEEECCCCCEEEEEc
Q 025083          196 STDD-VYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       196 ~v~d-~~~~~~~l~~~~~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~  247 (258)
                      .+++ ++++.+++    +++|+++..+|.+..+  +.++.+||+|||||+||+++
T Consensus        74 ~~~~~~~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          74 ITEPPIDELVAHL----EAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EecccHHHHHHHH----HHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            9985 78777777    8999999887755432  23578999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=1.7e-15  Score=110.91  Aligned_cols=115  Identities=20%  Similarity=0.210  Sum_probs=82.1

Q ss_pred             eeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCccc----ccCCceeeEEEEECC
Q 025083          124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY----TKGNAYAQVAISTDD  199 (258)
Q Consensus       124 v~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~----~~~~g~~hi~~~v~d  199 (258)
                      ..|.|+|++++.+||+++|||+.......+++....+.+..++    ..+.+.........    ....+..|++|.|+|
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGD----GGVMVGSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECC----EEEEEecCCCcccccccccCCCceEEEEEEECC
Confidence            4689999999999999999999887653333333333444332    23334332211111    223467789999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          200 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       200 ~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      ++++++++    +++|+++..+|...++ +.+.++|+|||||+|+|.+
T Consensus        79 ~d~~~~~l----~~~G~~v~~~~~~~~~-g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          79 VDAHYERA----RAAGAEILREPTDTPY-GSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHH----HHCCCEEeeCccccCC-CcEEEEEECCCCCEEEEec
Confidence            99999988    8899999988876654 4578899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=7.9e-16  Score=111.62  Aligned_cols=117  Identities=23%  Similarity=0.323  Sum_probs=83.2

Q ss_pred             eeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc--cccCCceeeEEEEECCh
Q 025083          123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAISTDDV  200 (258)
Q Consensus       123 hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hi~~~v~d~  200 (258)
                      ||.|.|+|++++.+||+++|||++........ +...+.+..... ....+.+........  .....+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            89999999999999999999999887653222 233333432211 134455543322211  12345788999999999


Q ss_pred             HHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          201 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       201 ~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      +++++++    +++|+++..+|....  .++.+|++||+||+|||++
T Consensus        79 ~~~~~~l----~~~g~~~~~~~~~~~--~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEEL----KARGVEFSEEPREMP--YGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHH----HhCCCEEeeccccCC--CceEEEEECCCCCEEEEeC
Confidence            9999999    889999998774332  3488999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=3.3e-16  Score=112.52  Aligned_cols=113  Identities=25%  Similarity=0.187  Sum_probs=81.3

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc-cccCCceeeEEEEECC
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAISTDD  199 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~~v~d  199 (258)
                      |+|++|.|+|++++.+||+++|||+...+....   ....++..++   ...+.+........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGD---GPQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCC---CcEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            579999999999999999999999877553322   1223444332   23455544332211 1234578899999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEE
Q 025083          200 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  245 (258)
Q Consensus       200 ~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  245 (258)
                      ++++++++    +++|+++..++..  ..+.+.++++||+|++|||
T Consensus        75 ~~~~~~~l----~~~g~~~~~~~~~--~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARL----KAAGVPYTESDVP--GDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHH----HHcCCCcccccCC--CCCccEEEEECCCCCEEeC
Confidence            99998888    8999999887654  2245789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=5.2e-16  Score=113.43  Aligned_cols=113  Identities=19%  Similarity=0.295  Sum_probs=78.4

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEe----cCCcccccCCceeeEEE
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYS----YGVTEYTKGNAYAQVAI  195 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~----~~~~~~~~~~g~~hi~~  195 (258)
                      ++.++.|.|+|+++|.+||+++|||++.....    . ...+ .  .   ...+.+...    ....+...+.+..|++|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~----~-~~~~-~--~---~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~   70 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG----E-NVTF-E--G---GFALQEGYSWLEGISKADIIEKSNNFELYF   70 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC----c-eEEE-e--c---cceeccchhhhccCCcccccccCCceEEEE
Confidence            57899999999999999999999998764321    1 1111 1  0   111111100    00111122345678999


Q ss_pred             EECChHHHHHHHHHHHHHhCC-eeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          196 STDDVYKSAEVVNLVTQELGG-KITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       196 ~v~d~~~~~~~l~~~~~~~G~-~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      .|+|+++.+++|    +++|+ ++..+|...++ +.+.++|+|||||.|||.+.
T Consensus        71 ~v~dvd~~~~~l----~~~g~~~~~~~~~~~~~-g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          71 EEEDFDAFLDKL----KRYDNIEYVHPIKEHPW-GQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EehhhHHHHHHH----HhcCCcEEecCcccCCC-ccEEEEEECCCCCEEEEecc
Confidence            999999999999    88875 78777776654 46899999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK06724 hypothetical protein; Provisional

Probab=99.70  E-value=5.7e-16  Score=114.44  Aligned_cols=112  Identities=18%  Similarity=0.231  Sum_probs=74.3

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhc---CCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeE
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKAL---GMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV  193 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi  193 (258)
                      +..+++||+|.|+|+++|++||+++|   |++......         + .  .+  ...+.|.. ... ......|..|+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~---------~-~--~g--~~~l~l~~-~~~-~~~~~~g~~h~   67 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVA---------Y-S--TG--ESEIYFKE-VDE-EIVRTLGPRHI   67 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEe---------e-e--CC--CeeEEEec-CCc-cccCCCCceeE
Confidence            45679999999999999999999976   555432111         1 1  10  11222211 111 01123478899


Q ss_pred             EEEE---CChHHHHHHHHHHHHHhCCeeecCCccCCC--CCeeEEEEECCCCCEEEEEcc
Q 025083          194 AIST---DDVYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       194 ~~~v---~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +|.|   ++++++.+++    +++|+++..+|...+.  .+.+.+||+|||||.|||+..
T Consensus        68 af~v~~~~dvd~~~~~l----~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         68 CYQAINRKVVDEVAEFL----SSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             EEecCChHHHHHHHHHH----HHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence            9999   4566666555    9999999888765432  334788999999999999866

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.69  E-value=1e-15  Score=112.66  Aligned_cols=119  Identities=22%  Similarity=0.337  Sum_probs=84.8

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCC-ccceeEEEeeecCCCceeEEEEEEecCCcc-c-----ccCCceeeE
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-ELKCALAMLGYAEEDQTTVLELAYSYGVTE-Y-----TKGNAYAQV  193 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~-----~~~~g~~hi  193 (258)
                      +.||+|.|+|++++.+||+++|||+........ ..+...+++..+    ...+++........ .     ..+.+..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999987655432 223445566542    45566665432211 1     235689999


Q ss_pred             EEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCC--CCEEEEEc
Q 025083          194 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD--GWKTVLVD  247 (258)
Q Consensus       194 ~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPd--G~~iel~~  247 (258)
                      +|.|+|++++++++    +++|+++..+|.....++..++++.||+  |+.|||++
T Consensus        77 ~f~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARL----KAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHH----HHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            99999999999988    8999999887764333333444455555  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=2.1e-15  Score=111.31  Aligned_cols=117  Identities=24%  Similarity=0.265  Sum_probs=81.6

Q ss_pred             CceeeeEEecChhhHHHHHHHhc---CCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc---cccCCceeeE
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKAL---GMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE---YTKGNAYAQV  193 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~g~~hi  193 (258)
                      +|+||.|.|+|++++.+||+++|   ||++......   .  ..+... .  .+..+.+........   ...+.++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~---~--~~~~~~-~--~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED---G--RSWRAG-D--GGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc---C--ceEEec-C--CceEEEEEecccCCCcccccCCcCeeEE
Confidence            57899999999999999999999   9998776421   1  122221 1  145566654332211   1234578999


Q ss_pred             EEEECC---hHHHHHHHHHHHHHhCCeeecCCccC--CCCCeeEEEEECCCCCEEEEEcc
Q 025083          194 AISTDD---VYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       194 ~~~v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +|.|+|   ++++++++    +++|+++...|...  ...+.+++||+||||++|||+.+
T Consensus        73 a~~v~~~~d~~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          73 AFRAPSREAVDELYARL----AKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHH----HHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            999986   55555555    89999998876542  22346789999999999999853

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2.2e-15  Score=110.70  Aligned_cols=119  Identities=23%  Similarity=0.278  Sum_probs=80.5

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCc-ccccCCceeeEEEEE
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-EYTKGNAYAQVAIST  197 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~g~~hi~~~v  197 (258)
                      ++++|+.|.|+|++++.+||+++|||++.....      ..+++..++  ....+.+....... ......+..|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            368999999999999999999999999887631      124444332  24556665433221 122335789999999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      ++. +.++++.++++++|+++.. +....  ..+.+||+|||||+|||....
T Consensus        73 ~~~-~~v~~~~~~l~~~g~~~~~-~~~~~--~~~~~~~~DPdG~~iEi~~~~  120 (125)
T cd07255          73 PSR-ADLAAALRRLIELGIPLVG-ASDHL--VSEALYLSDPEGNGIEIYADR  120 (125)
T ss_pred             CCH-HHHHHHHHHHHHcCCceec-ccccc--ceeEEEEECCCCCEEEEEEec
Confidence            872 2333444445999998754 32222  247899999999999998654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.68  E-value=2.6e-15  Score=108.85  Aligned_cols=114  Identities=22%  Similarity=0.296  Sum_probs=80.3

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .+++|+.|.|+|++++.+||+++|||++.....      ..+++..+.. .++.+.+...       ...+..|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~-------~~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSED-DHHSLVLTEG-------DEPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCCC-CcEEEEEEeC-------CCCCceeEEEEcC
Confidence            368999999999999999999999999886542      1244443311 2444444322       1247889999998


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +.+ .++++.++++++|+++...|...++ .++.+||+||+||+||++..
T Consensus        67 ~~~-~v~~~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          67 SEE-DLEALAAHLEAAGVAPEEASDPEPG-VGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CHH-HHHHHHHHHHHcCCceEEcCccCCC-CceEEEEECCCCCEEEEEEc
Confidence            632 2333334448999999887653333 45889999999999999865

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=8e-16  Score=112.75  Aligned_cols=92  Identities=47%  Similarity=0.937  Sum_probs=70.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCC-----------CCeEEEEeccCCCCceeEEEEEeecCCCcccCC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----------EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIG   90 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~   90 (258)
                      .++.|++|+|+|+++|++||+++|||++..+...++           +.+..++++..+......+||+.+.+..+++.|
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g   80 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELG   80 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCC
Confidence            368999999999999999999999999887665554           445556676543445668999987766556666


Q ss_pred             CCeeeEEEEcCC-----------------------CCCCcEEEEEE
Q 025083           91 TGFGHLAIATED-----------------------DPDGYIFELIQ  113 (258)
Q Consensus        91 ~~~~hia~~v~d-----------------------DP~G~~iel~~  113 (258)
                      .+..|+|+.+.|                       ||||+.|||+.
T Consensus        81 ~~~~hlav~~~d~~~~l~~~Gv~~~~~~~~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          81 NDFLGITIHSKQAVSNAKKHNWPVTEVEDGVYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCEEEEEEECHHHHHHHHHCCCceecCCCCEEEEECCCCCEEEEec
Confidence            666666666655                       99999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.68  E-value=3.3e-15  Score=111.23  Aligned_cols=123  Identities=20%  Similarity=0.199  Sum_probs=83.3

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECC
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  199 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  199 (258)
                      +|.|+.|.|+|++++.+||+++|||++......    ....++..+. .....+.+.............++.|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            589999999999999999999999998765431    1234444331 12345555443222111233578899999998


Q ss_pred             hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          200 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       200 ~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                      ++++ +.+.+++.++|+++..++..   +.++.+|++||+||+|||+.....
T Consensus        76 ~~~v-~~~~~~l~~~G~~~~~~~~~---~~~~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          76 LDDL-RDLYERLRAAGITPVWPVDH---GNAWSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             HHHH-HHHHHHHHHCCCCccccCCC---CceeEEEEECCCCCEEEEEEcCCC
Confidence            6543 23334458999998765422   234789999999999999976643

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=4e-15  Score=109.26  Aligned_cols=115  Identities=23%  Similarity=0.284  Sum_probs=78.2

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEec--------C--CcccccCCce
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY--------G--VTEYTKGNAY  190 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--------~--~~~~~~~~g~  190 (258)
                      +.|+.|.|+|++++.+||+++|||+.......  ..+..  +..+    ...+.+....        .  +.......+.
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHES--GDYGE--LETG----ETTLAFASHDLAESNLKGGFVKADPAQPPAG   72 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCC--CcEEE--ecCC----cEEEEEEcccccccccccCccCCccccCCCc
Confidence            46999999999999999999999987643221  11211  1111    1122221110        0  0001112244


Q ss_pred             eeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          191 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       191 ~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      .|++|.|+|++++++++    +++|+++..+|...++ +.+.++++|||||.|+|+++
T Consensus        73 ~~~~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          73 FEIAFVTDDVAAAFARA----VEAGAVLVSEPKEKPW-GQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEEEcCCHHHHHHHH----HHcCCEeccCCccCCC-CcEEEEEECCCCCEEEEecC
Confidence            68999999999999999    8999999888766554 45788999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=7.3e-15  Score=107.25  Aligned_cols=115  Identities=21%  Similarity=0.232  Sum_probs=82.2

Q ss_pred             eeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCc--ccccCCceeeEEEEECChH
Q 025083          124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--EYTKGNAYAQVAISTDDVY  201 (258)
Q Consensus       124 v~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~g~~hi~~~v~d~~  201 (258)
                      +.|.|+|++++.+||+++||++.......+++.+....+..++    ..+.+.......  +...+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGD----SVLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECC----EEEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            4689999999999999999999887654333333334444332    344444221110  0122346779999999999


Q ss_pred             HHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          202 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       202 ~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      ++++++    .+.|+++..+|...++ +.+.++++||||++|+|.+
T Consensus        81 ~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          81 ATFARA----VAAGATSVMPPADQFW-GDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHH----HHCCCeEecCcccccc-cceEEEEECCCCCEEEEec
Confidence            999888    8899999988865544 4689999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=4.8e-15  Score=107.96  Aligned_cols=111  Identities=19%  Similarity=0.201  Sum_probs=78.2

Q ss_pred             eeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCc-c----cccCCceeeEEEEE
Q 025083          123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-E----YTKGNAYAQVAIST  197 (258)
Q Consensus       123 hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~----~~~~~g~~hi~~~v  197 (258)
                      +..|.|+|+++|.+||+++|||+......     . ...+..++  ....+.+....... +    ...+.+ .|++|.|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~-----~-~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~v   74 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD-----W-YVSLRSPD--GGVELAFMLPGHETVPAAQYQFQGQG-LILNFEV   74 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC-----c-EEEEecCC--CceEEEEccCCCCCCcchhcccCCce-EEEEEEE
Confidence            57899999999999999999999876421     1 22333222  12444443221110 0    112223 4899999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      +|++++++++    +++|+++..+|...+. +.+.++|+|||||+|||++
T Consensus        75 ~did~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          75 DDVDAEYERL----KAEGLPIVLPLRDEPW-GQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CCHHHHHHHH----HhcCCCeeeccccCCC-cceEEEEECCCCCEEEEEC
Confidence            9999999999    8899999888766554 4588999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=5.2e-15  Score=106.68  Aligned_cols=109  Identities=21%  Similarity=0.224  Sum_probs=78.9

Q ss_pred             eeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHH
Q 025083          123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  202 (258)
Q Consensus       123 hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~  202 (258)
                      ...|.|+|++++.+||+++|||+.....     + ...++..+.. .++.+.+.....     .+....|++|.|+|+++
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~~-----~-~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~   70 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMDH-----G-WIATFASPQN-MTVQVSLATEGG-----TATVVPDLSIEVDDVDA   70 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEcC-----C-ceEEEeecCC-CCcEEEEecCCC-----CCCCCCEEEEEeCCHHH
Confidence            3578999999999999999999976431     1 2233333221 234455432211     12345699999999999


Q ss_pred             HHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          203 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       203 ~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      ++++|    +++|+++..+|...++ +.+.+||.||+||+|+|+++
T Consensus        71 ~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          71 ALARA----VAAGFAIVYGPTDEPW-GVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHH----HhcCCeEecCCccCCC-ceEEEEEECCCCCEEEEEEc
Confidence            99999    8999999888766554 45788999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.65  E-value=4.4e-16  Score=113.83  Aligned_cols=120  Identities=30%  Similarity=0.430  Sum_probs=80.3

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeE-------------------EEeeecCCCceeEEEEEEecC
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCAL-------------------AMLGYAEEDQTTVLELAYSYG  180 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~l~~~~~  180 (258)
                      .+.|.+++++|+.+|+.||++++|+.+.....+.+..++.                   +++-.    ....++|..+++
T Consensus        22 ~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~----~~~~~ELthn~G   97 (170)
T KOG2944|consen   22 LLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFS----RNAKLELTHNWG   97 (170)
T ss_pred             hhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEec----ccCceeeecCCC
Confidence            4567777777777777777777776665433322211111                   22211    145678888776


Q ss_pred             Ccc-----cc----cCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          181 VTE-----YT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       181 ~~~-----~~----~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +..     +.    .+.|++||||.|+|+++++++|    +++|+++...|..  +....++|+.||||+.|||....
T Consensus        98 tes~~~~~~~ngN~~prGfgHIci~V~di~sac~~l----kekGV~f~Kk~~d--Gk~K~iaF~~dpDgywiei~~~s  169 (170)
T KOG2944|consen   98 TESPPDQAYLNGNKEPRGFGHICIEVDDINSACERL----KEKGVRFKKKLKD--GKMKPIAFLHDPDGYWIEIELES  169 (170)
T ss_pred             CCCCcchhhcCCCCCCCccceEEEEeCCHHHHHHHH----HHhCceeeecCCC--ccccceeEEECCCCCeEEEeecC
Confidence            542     21    2238999999999999999999    8999998776532  22236899999999999998653

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.65  E-value=3.9e-15  Score=108.54  Aligned_cols=113  Identities=26%  Similarity=0.305  Sum_probs=78.2

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .+|.|+.|.|+|++++++||+++|||+......    ++  +++..++. ..+.+.+...       ..++..|++|.|+
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~v~   67 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GI--VYLRATGS-EHHILRLRRS-------DRNRLDVVSFSVA   67 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CE--EEEECCCC-ccEEEEeccC-------CCCCCceEEEEeC
Confidence            478999999999999999999999999765432    12  33442221 2333333211       1236789999996


Q ss_pred             C---hHHHHHHHHHHHHHhCCeeecCCccC-CCCCeeEEEEECCCCCEEEEEcch
Q 025083          199 D---VYKSAEVVNLVTQELGGKITRQPGPI-PGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       199 d---~~~~~~~l~~~~~~~G~~i~~~p~~~-~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +   ++++.+++    +++|+++..+|... ..++++.++|+||+||+|||+...
T Consensus        68 ~~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          68 SRADVDALARQV----AARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CHHHHHHHHHHH----HHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence            5   44444444    89999998776433 222457899999999999998653

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.65  E-value=4.2e-15  Score=106.28  Aligned_cols=108  Identities=23%  Similarity=0.294  Sum_probs=74.9

Q ss_pred             EEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHHHH
Q 025083          126 LRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAE  205 (258)
Q Consensus       126 l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~  205 (258)
                      |.|+|++++++||+++|||+......    .+  +.+..+.........+.....  ......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DY--VDFSLGFRFHDGVIEFLQFPD--PPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SE--EEEEETEEEEEEEEEEEEEES--SSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----Ce--EEEEeccchhhhhHHHccCCc--cccCCCceeEEEEEEcCHHHHHH
Confidence            68999999999999999999888432    12  222221100011222322221  12234578899999999999999


Q ss_pred             HHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEE
Q 025083          206 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  246 (258)
Q Consensus       206 ~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  246 (258)
                      ++    +++|+++..+|...++ +.+.++|.|||||+|||+
T Consensus        73 ~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RL----KELGAEIVTEPRDDPW-GQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HH----HHTTSEEEEEEEEETT-SEEEEEEE-TTS-EEEEE
T ss_pred             HH----HHCCCeEeeCCEEcCC-CeEEEEEECCCCCEEEeC
Confidence            99    8999999888877555 468999999999999986

...

>PLN02367 lactoylglutathione lyase

Probab=99.65  E-value=2.6e-15  Score=119.66  Aligned_cols=95  Identities=37%  Similarity=0.741  Sum_probs=77.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCC---------------ceeEEEEEeecCCCc
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ---------------SYFVVELTYNYGVTS   86 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~~   86 (258)
                      ..++|++|+|+|+++|++||+++|||++..+.+.+++.++.+|+++++..               ....|||+++++...
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~  153 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTES  153 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCc
Confidence            58999999999999999999999999999988888888999999753311               134799998876431


Q ss_pred             ------ccCC----CCeeeEEEEcCC-------------------------------CCCCcEEEEEECCC
Q 025083           87 ------YDIG----TGFGHLAIATED-------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus        87 ------~~~~----~~~~hia~~v~d-------------------------------DP~G~~iel~~~~~  116 (258)
                            +..+    .|+.||||.|+|                               ||||+.|||++...
T Consensus       154 ~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        154 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             cccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEeccc
Confidence                  3222    489999999998                               99999999998764

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.64  E-value=7.1e-15  Score=106.29  Aligned_cols=109  Identities=17%  Similarity=0.239  Sum_probs=76.5

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .++.|+.|.|+|+++|.+||++ |||+...+..      ..+++..++. .+..+.+. .      ....++.|++|.|+
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~------~~~~~~~~~~-~~~~~~~~-~------~~~~~~~~~af~v~   66 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGT-DPFVYVAR-K------GEKARFVGAAFEAA   66 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC------CeEEEecCCC-ccEEEEcc-c------CCcCcccEEEEEEC
Confidence            4689999999999999999998 9998765531      1234443221 12222211 1      11247889999999


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      |.+++.+.+    +++|.++...+. .++ +++++||+|||||.|||+..
T Consensus        67 ~~~~~~~~~----~~~g~~~~~~~~-~~~-~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          67 SRADLEKAA----ALPGASVIDDLE-APG-GGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CHHHHHHHH----HcCCCeeecCCC-CCC-CceEEEEECCCCCEEEEEec
Confidence            988777777    778998765432 232 45789999999999999754

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=8.1e-15  Score=107.43  Aligned_cols=118  Identities=22%  Similarity=0.238  Sum_probs=77.0

Q ss_pred             ceeeeEEecChhhHHHHHHHh---cCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          121 LCQVMLRVGDLGRSIKFYEKA---LGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      +.|+.|.|+|+++|.+||+++   |||+...+..  + . . +.+..+.  ....+.+.......+ ....+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~-~-~-~~~~~~~--~~~~~~l~~~~~~~~-~~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P-G-A-VGYGKGG--GGPDFWVTKPFDGEP-ATAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C-c-e-eEeccCC--CCceEEEeccccCCC-CCCCCceEEEEEC
Confidence            579999999999999999999   6898765431  1 1 2 2233221  134455543322111 1223457999999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCC--CCeeEEEEECCCCCEEEEEc
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~  247 (258)
                      +|.+ .++++.+++.++|+.+..+|...+.  ...+.+||+|||||.|||+.
T Consensus        73 ~~~~-~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~~  123 (123)
T cd07262          73 PSRE-AVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAVC  123 (123)
T ss_pred             CCHH-HHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEeC
Confidence            9842 3334445558999998877765443  23457899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=8e-15  Score=107.09  Aligned_cols=114  Identities=21%  Similarity=0.227  Sum_probs=77.3

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCc------ccccCCceeeEE
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT------EYTKGNAYAQVA  194 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~------~~~~~~g~~hi~  194 (258)
                      +.++.|.|+|++++.+||+++|||++..+.   ++  ..+++..++.   ..+.+.......      +.....+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~--~~~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE---DR--RLAFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC---CC--ceEEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            468999999999999999999999987642   11  2344444432   233333221110      111234788999


Q ss_pred             EEEC--ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          195 ISTD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       195 ~~v~--d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      |.++  |++++++++    .++|+++...+. . ..+++.+||+||||++|||+++
T Consensus        73 ~~v~~~dl~~~~~~l----~~~g~~~~~~~~-~-~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHL----EAKGVAIESEVQ-W-PRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHH----HhcCCceecccc-C-CCCeeEEEEECCCCCEEEEecC
Confidence            9995  566666666    899999876553 2 3345889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=7.9e-15  Score=106.02  Aligned_cols=112  Identities=23%  Similarity=0.224  Sum_probs=74.9

Q ss_pred             eeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc-cccCCceeeEEEEECChHH
Q 025083          124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAISTDDVYK  202 (258)
Q Consensus       124 v~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~~v~d~~~  202 (258)
                      +.|.|+|+++|.+||+++||++......    .+..  +..++   ...+.+.......+ .....+..|++|.|+|.+ 
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~--~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~-   71 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP----TFAL--FVLGS---GVKLGLWSRHTVEPASDATGGGSELAFMVDDGA-   71 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC----ceEE--EEeCC---CcEEEEeeccccCCCCCCCCCceEEEEEcCCHH-
Confidence            6799999999999999999998765421    2322  22222   23455543332211 112346789999998732 


Q ss_pred             HHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          203 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       203 ~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      .++++.+++.++|+++..+|...+.  ++.++|+|||||+|||+.
T Consensus        72 ~~~~~~~~~~~~g~~v~~~~~~~~~--g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          72 AVDALYAEWQAKGVKIIQEPTEMDF--GYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHHHHHCCCeEecCccccCC--ccEEEEECCCCCEEEeeC
Confidence            2233334448999999988866544  367899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.64  E-value=7.7e-15  Score=107.41  Aligned_cols=109  Identities=29%  Similarity=0.344  Sum_probs=75.5

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC-
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD-  198 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~-  198 (258)
                      ++.|+.|.|+|++++.+||+++|||+.......      ..++..+.    ..+.+......   ...++..|++|.++ 
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~~------~~~~~~~~----~~~~l~~~~~~---~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWDK------GAYLEAGD----LWLCLSVDANV---GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecCC------ceEEecCC----EEEEEecCCCC---CCCCCeeeEEEEeCH
Confidence            578999999999999999999999998765321      12333221    22233221111   12356889999994 


Q ss_pred             -ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          199 -DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       199 -d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                       |++++++++    +++|+++..++..    .++.+||+|||||+|||+...
T Consensus        68 ~dl~~~~~~l----~~~G~~~~~~~~~----~~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKL----RQAGVKEWKENTS----EGDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHH----HHcCCcccCCCCC----CccEEEEECCCCCEEEEEeCC
Confidence             566666666    8999998764432    137899999999999999765

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.63  E-value=1.6e-14  Score=103.79  Aligned_cols=109  Identities=25%  Similarity=0.267  Sum_probs=78.0

Q ss_pred             eEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHHH
Q 025083          125 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  204 (258)
Q Consensus       125 ~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~  204 (258)
                      .|.|+|++++.+||+++|||+......  ..  ...++..+    ...+.+.......+. ...+..|++|.++|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            689999999999999999999876543  11  22334422    345555443322111 2346678999999999999


Q ss_pred             HHHHHHHHHhCCe-eecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          205 EVVNLVTQELGGK-ITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       205 ~~l~~~~~~~G~~-i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      +++    +++|++ +..++...++ +.+.++++||+|+.|||++
T Consensus        74 ~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AEL----KAKGADLIVYPPEDQPW-GMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHH----HHcCCcceecCccCCCc-ccEEEEEECCCCCEEEecC
Confidence            998    889999 5655554433 4578999999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.63  E-value=7.7e-15  Score=105.83  Aligned_cols=109  Identities=23%  Similarity=0.300  Sum_probs=72.7

Q ss_pred             eeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC--Ch
Q 025083          123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD--DV  200 (258)
Q Consensus       123 hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~--d~  200 (258)
                      |+.|.|+|++++.+||+++|||+...+...      ..++..+    ...+.+......  ...+.+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~~------~~~~~~~----~~~l~~~~~~~~--~~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSSK------EAYFELA----GLWICLMEEDSL--QGPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccCc------eeEEEec----CeEEEeccCCCc--CCCCCCccEEEEEcCHHHH
Confidence            799999999999999999999998655321      1223322    233433322111  112346789999995  45


Q ss_pred             HHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          201 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       201 ~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +++++++    +++|+++...+.. ....++.+|++|||||+|||++.
T Consensus        69 ~~~~~~l----~~~G~~~~~~~~~-~~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERL----KALGVEMKPERPR-VQGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHH----HHcCCccCCCccc-cCCCceEEEEECCCCCEEEEEeC
Confidence            5555555    8999998644322 22235889999999999999853

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=1e-14  Score=107.22  Aligned_cols=113  Identities=24%  Similarity=0.234  Sum_probs=73.8

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCC-----ccc--ccCCceeeE
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV-----TEY--TKGNAYAQV  193 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-----~~~--~~~~g~~hi  193 (258)
                      +.++.|.|+|+++|++||++ |||+.......+.  .  ..+..++   ...+.+......     .+.  ..+.+..|+
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~--~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l   72 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK--A--ACMVISD---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLI   72 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC--e--EEEEECC---ceEEEEEcHHHHhhccCCCcccCCCCCeEEE
Confidence            36899999999999999976 9998764332221  1  1122221   234444322110     000  123356789


Q ss_pred             EEEECC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          194 AISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       194 ~~~v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      +|.|++   ++++++++    +++|+++..+|...++  .+.+||+|||||+|||+.
T Consensus        73 ~f~v~~~~~vd~~~~~l----~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          73 SLSADSREEVDELVEKA----LAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             EEeCCCHHHHHHHHHHH----HHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            999986   55555555    9999999887766543  467899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.61  E-value=3.5e-15  Score=116.17  Aligned_cols=119  Identities=39%  Similarity=0.698  Sum_probs=100.6

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCc-----------cceeEEEeeecCCCceeEEEEEEecCCcccc
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----------LKCALAMLGYAEEDQTTVLELAYSYGVTEYT  185 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  185 (258)
                      +..+.-|+.+.|.|.+++++||+++|||++.+..++++           +.|+-+++++++++.|++++|+++++...+.
T Consensus        14 ~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Ye   93 (299)
T KOG2943|consen   14 DTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYE   93 (299)
T ss_pred             cchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCcccee
Confidence            45678899999999999999999999999998877765           5688899999999999999999999988899


Q ss_pred             cCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          186 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       186 ~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      .|+++.||.+.++|+-..++.+    +..|.+         .++...+++.||||+.|+|++.
T Consensus        94 lGndfg~i~I~s~dv~~~ve~v----~~p~~~---------~~g~~~~~v~dPdGykF~l~~~  143 (299)
T KOG2943|consen   94 LGNDFGGITIASDDVFSKVEKV----NAPGGK---------GSGCGIAFVKDPDGYKFYLIDR  143 (299)
T ss_pred             ccCCcccEEEeHHHHHHHHHHh----cCcCCc---------ccceEEEEEECCCCcEEEEecc
Confidence            9999999999999876666666    333331         2234678899999999999974

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.61  E-value=1.7e-14  Score=105.56  Aligned_cols=114  Identities=19%  Similarity=0.181  Sum_probs=73.8

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEec-----CCcccccCCceeeEEE
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY-----GVTEYTKGNAYAQVAI  195 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-----~~~~~~~~~g~~hi~~  195 (258)
                      ++||+|.|+|+++|++||++ |||++.......    ..+.+..+.   ...+.+....     .+.....+.+..|++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~~----~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADDE----PHVEAVLPG---GVRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCCC----CcEEEEeCC---CEEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            57999999999999999975 999875432210    112222221   1223222111     0101112335567888


Q ss_pred             EEC---ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          196 STD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       196 ~v~---d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      .+.   |++++++++    +++|+++..+|...+. +.+.++|+|||||.|||+.
T Consensus        73 ~~~~~~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~  122 (122)
T cd07235          73 LCETPAEVDALYAEL----VGAGYPGHKEPWDAPW-GQRYAIVKDPDGNLVDLFA  122 (122)
T ss_pred             EcCCHHHHHHHHHHH----HHCCCCcCCCCccCCC-CCEEEEEECCCCCEEEEeC
Confidence            876   677777777    8999999888766554 4578899999999999973

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=3.6e-14  Score=103.56  Aligned_cols=114  Identities=19%  Similarity=0.213  Sum_probs=75.3

Q ss_pred             eeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChH
Q 025083          122 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  201 (258)
Q Consensus       122 ~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~  201 (258)
                      .|+.|.|+|+++|.+||+++||++......    ++ ..+.. +.  ....+.+.....    ...++..|++|.|+|.+
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~-~~~~~-~~--~~~~~~~~~~~~----~~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD----DY-AKFLL-ED--PRLNFVLNERPG----APGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC----Ce-eEEEe-cC--CceEEEEecCCC----CCCCCeeEEEEEeCCHH
Confidence            599999999999999999999998765432    11 22222 11  133333332211    11157889999999843


Q ss_pred             HHHHHHHHHHHHhCCeeecCCccCC-CCCeeEEEEECCCCCEEEEEcc
Q 025083          202 KSAEVVNLVTQELGGKITRQPGPIP-GLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       202 ~~~~~l~~~~~~~G~~i~~~p~~~~-~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      + ++++.+++.++|+++..+|.... .+..+.+|++||+||+|||+..
T Consensus        71 d-l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          71 E-VAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             H-HHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence            3 23333444999999887654332 2224789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=1e-14  Score=106.98  Aligned_cols=113  Identities=17%  Similarity=0.185  Sum_probs=71.8

Q ss_pred             eeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCC---ccc--ccCCceeeEEE--
Q 025083          123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV---TEY--TKGNAYAQVAI--  195 (258)
Q Consensus       123 hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~--~~~~g~~hi~~--  195 (258)
                      ||.|.|+|+++|++||+++|||++.....    .+  +.+...+  ....+.+......   ...  ....+..|++|  
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----TW--VDFDFFG--HQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----Cc--ccccccC--cEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            89999999999999999999998764321    11  1222111  1222222211100   000  11124566654  


Q ss_pred             EECChHHHHHHHHHHHHHhCCeeecCCccCC---CCCeeEEEEECCCCCEEEEEc
Q 025083          196 STDDVYKSAEVVNLVTQELGGKITRQPGPIP---GLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       196 ~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~---~~~~~~~~~~DPdG~~iel~~  247 (258)
                      .++|+++++++|    +++|+++..+|....   .++.+.+||+|||||+|||.+
T Consensus        74 ~~~dv~~~~~~l----~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERL----EAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHH----HHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            557788888777    899999988775421   223588999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.60  E-value=1.3e-13  Score=118.80  Aligned_cols=189  Identities=17%  Similarity=0.267  Sum_probs=124.4

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCC--CeEEEEeccCCCCceeEEEEEeecCC-----------------
Q 025083           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGV-----------------   84 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~-----------------   84 (258)
                      ++||.++|+|.+++..+|+..|||+.+.......+  ......+.    ++.+.+.++.+...                 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r----~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~   76 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLR----SGDLVFLFTAPYSPKIGAGDDDPASTAPHPS   76 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEE----eCCEEEEEeCCCCCccccccccccccccccc
Confidence            58999999999999999999999998765432122  12222233    23344555544211                 


Q ss_pred             --Cc------ccCCCCeeeEEEEcCC-----------------------CC--------------CCcEEEEEECCC---
Q 025083           85 --TS------YDIGTGFGHLAIATED-----------------------DP--------------DGYIFELIQRGP---  116 (258)
Q Consensus        85 --~~------~~~~~~~~hia~~v~d-----------------------DP--------------~G~~iel~~~~~---  116 (258)
                        ..      ...|.++.-+||+|+|                       |.              .|..+.|+++..   
T Consensus        77 ~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~~~~  156 (398)
T PLN02875         77 FSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDG  156 (398)
T ss_pred             cCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCCCCC
Confidence              00      1245788899999999                       21              222333444310   


Q ss_pred             --------------------CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCc-----cceeEEEeeecCCCcee
Q 025083          117 --------------------TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----LKCALAMLGYAEEDQTT  171 (258)
Q Consensus       117 --------------------~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  171 (258)
                                          ...+|+||++.|++++++..||+++|||+.......++     .+.....+..+.  ...
T Consensus       157 ~~f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~--g~v  234 (398)
T PLN02875        157 AKFLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN--EMV  234 (398)
T ss_pred             CccCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC--CcE
Confidence                                02368999999999999999999999998876543221     123444455333  245


Q ss_pred             EEEEEEecC----Ccc------cccCCceeeEEEEECChHHHHHHHHHHHHHh----CCeeecCC
Q 025083          172 VLELAYSYG----VTE------YTKGNAYAQVAISTDDVYKSAEVVNLVTQEL----GGKITRQP  222 (258)
Q Consensus       172 ~l~l~~~~~----~~~------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~----G~~i~~~p  222 (258)
                      .+.|..+..    ..+      ...|.|++||||.|+||.+.+++|    +++    |+++...|
T Consensus       235 ~ipLnEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~L----ra~~~~~Gv~fL~~P  295 (398)
T PLN02875        235 LLPLNEPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREM----RARSHIGGFEFMPPP  295 (398)
T ss_pred             EEEeccCCCCCCCcChHHHHHHhcCCCCeeEEEeecCCHHHHHHHH----HhccccCCeecCCCC
Confidence            666665421    111      234679999999999999999999    777    99998754

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.60  E-value=3.7e-14  Score=103.59  Aligned_cols=108  Identities=19%  Similarity=0.164  Sum_probs=75.0

Q ss_pred             eeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHH
Q 025083          123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  202 (258)
Q Consensus       123 hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~  202 (258)
                      ...|.|+|+++|++||++ |||+...+...   .  .+.+..+    ...+.|......   .......|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~--~~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA---G--YMILRRG----DLELHFFAHPDL---DPATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC---C--EEEEEcC----CEEEEEEecCcC---CCCCCcceEEEEeCCHHH
Confidence            467899999999999999 99998765421   1  2334432    235555543211   112234579999999999


Q ss_pred             HHHHHHHHHHHhCCeee-------cCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          203 SAEVVNLVTQELGGKIT-------RQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       203 ~~~~l~~~~~~~G~~i~-------~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      ++++|    +++|+++.       .+|...+ .+.+.++|+|||||+|+|.+.
T Consensus        72 ~~~~l----~~~G~~~~~~~~~~~~~~~~~~-~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEF----RAAGLPETGSGIPRITPPEDQP-WGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHH----HHhCccccccCCCcccCCcCCC-CceeEEEEECCCCCEEEeecC
Confidence            99999    88999853       2232222 356889999999999999875

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.60  E-value=3.1e-14  Score=101.27  Aligned_cols=112  Identities=29%  Similarity=0.383  Sum_probs=81.9

Q ss_pred             eeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHH
Q 025083          123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  202 (258)
Q Consensus       123 hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~  202 (258)
                      |+.|.|+|++++.+||+++|||+........  .....++..+    ...+.+...........+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~--~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNG--GAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccC--CEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            7899999999999999999999988765321  1234445532    355666544332111234578999999999988


Q ss_pred             HHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEE
Q 025083          203 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  245 (258)
Q Consensus       203 ~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  245 (258)
                      ..+++    .++|+.+..++.. ...+.+.+++.||+|+.|+|
T Consensus        75 ~~~~l----~~~g~~~~~~~~~-~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERL----KAAGVEVLGEPRE-EPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHH----HHcCCcccCCCcC-CCCCcEEEEEECCCCcEEeC
Confidence            88888    8899998877641 23345899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.59  E-value=3.8e-14  Score=107.74  Aligned_cols=108  Identities=58%  Similarity=1.023  Sum_probs=79.2

Q ss_pred             chhhccCcccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccC
Q 025083           10 NAELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI   89 (258)
Q Consensus        10 ~~~~~~~~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~   89 (258)
                      .++|+.=+....++++||.|.|+|++++++||+++|||++..+...+...+..++++.+.......+++.......+...
T Consensus         4 ~~~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   83 (150)
T TIGR00068         4 SGDLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDL   83 (150)
T ss_pred             ccccccCcccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccC
Confidence            35677667777899999999999999999999999999987654434444456677654333444566654433222333


Q ss_pred             CCCeeeEEEEcCC---------------------------------CCCCcEEEEEECCCC
Q 025083           90 GTGFGHLAIATED---------------------------------DPDGYIFELIQRGPT  117 (258)
Q Consensus        90 ~~~~~hia~~v~d---------------------------------DP~G~~iel~~~~~~  117 (258)
                      +.++.|++|.|+|                                 ||+|+.|||++....
T Consensus        84 ~~g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  144 (150)
T TIGR00068        84 GNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKST  144 (150)
T ss_pred             CCceeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCch
Confidence            4578999999988                                 999999999987643

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.59  E-value=4.1e-14  Score=102.10  Aligned_cols=106  Identities=23%  Similarity=0.250  Sum_probs=71.5

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceee--EEEEE
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQ--VAIST  197 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~h--i~~~v  197 (258)
                      +|.|+.|.|+|+++|.+||+ +|||++..+..      ...+...+.  .+..+.+...  .     ..+..|  +.+.+
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~------~~~~~~~~~--~~~~~~~~~~--~-----~~~~~~~~~~~~~   65 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD------GLELRTAGN--DHRWARLLEG--A-----RKRLAYLSFGIFE   65 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC------ceEEEecCC--CceEEEeecC--C-----CCceeeEEEEeEh
Confidence            68999999999999999997 69999865421      122222222  2333433211  1     123444  45555


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +|+++++++|    +++|+++..+|..  . ..+.+||+||+||+|||...
T Consensus        66 ~d~~~~~~~l----~~~Gi~~~~~~~~--~-~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          66 DDFAAFARHL----EAAGVALAAAPPG--A-DPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             hhHHHHHHHH----HHcCCceecCCCc--C-CCCEEEEECCCCCEEEEecC
Confidence            7888888888    8999998876522  2 23678999999999999853

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.59  E-value=3e-14  Score=111.21  Aligned_cols=95  Identities=36%  Similarity=0.706  Sum_probs=74.2

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCC---------------ceeEEEEEeecCCC
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ---------------SYFVVELTYNYGVT   85 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~   85 (258)
                      -.+++|++|+|+|+++|++||+++|||++..+...+++.++.+|++++...               ....|||+.+.+..
T Consensus        25 ~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~  104 (185)
T PLN03042         25 GYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTE  104 (185)
T ss_pred             CcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCc
Confidence            468999999999999999999999999998887666667888888753211               23478998765432


Q ss_pred             c------cc----CCCCeeeEEEEcCC-------------------------------CCCCcEEEEEECC
Q 025083           86 S------YD----IGTGFGHLAIATED-------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        86 ~------~~----~~~~~~hia~~v~d-------------------------------DP~G~~iel~~~~  115 (258)
                      .      +.    .+.|+.|+||.|+|                               ||||+.|||++..
T Consensus       105 ~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        105 SDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             ccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECC
Confidence            1      21    12489999999998                               9999999999865

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.58  E-value=8.4e-14  Score=100.50  Aligned_cols=121  Identities=26%  Similarity=0.336  Sum_probs=87.0

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      ++..+.|..|.|+|++++++||.++|||+........+..+...... +.. ....+  ....   ....+.....+.|.
T Consensus         6 ~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~~-~~~-~gG~l--~~~~---~~~p~~~~~~iy~~   78 (127)
T COG3324           6 EKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPAD-GAG-AGGGL--MARP---GSPPGGGGWVIYFA   78 (127)
T ss_pred             cCCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceEEEEECC-Ccc-cccee--ccCC---cCCCCCCCEEEEEe
Confidence            45678999999999999999999999999877644322223222222 111 11221  1111   11222456679999


Q ss_pred             ECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          197 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       197 v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |+|+++.++++    .++|.+|+.++.+.++ .++++.+.||.||+|.|.+..
T Consensus        79 v~did~~l~rv----~~~GG~V~~p~~~~p~-~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          79 VDDIDATLERV----VAAGGKVLRPKTEFPG-GGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             cCChHHHHHHH----HhcCCeEEecccccCC-ceEEEEEECCCCCEEEEeecC
Confidence            99999999999    8999999999887775 568999999999999998753

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.54  E-value=1.2e-13  Score=117.16  Aligned_cols=115  Identities=19%  Similarity=0.169  Sum_probs=79.0

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .++.|+.|.|+|++++.+||+++|||++..+...      .+++.......+..+.+..       ....++.|++|.|+
T Consensus         3 ~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~-------~~~~g~~hiaf~v~   69 (303)
T TIGR03211         3 MRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTE-------ADTAGLDHMAFKVE   69 (303)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeecc-------CCCCceeEEEEEeC
Confidence            5789999999999999999999999998765321      2233321111133343321       11347899999998


Q ss_pred             C---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          199 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       199 d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      +   +++++++|    +++|+++...|.....+.++.+||+||||+.|||++...
T Consensus        70 ~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~  120 (303)
T TIGR03211        70 SEADLERLVKRL----EAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKE  120 (303)
T ss_pred             CHHHHHHHHHHH----HHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccc
Confidence            5   44445555    899999876654222223478999999999999997554

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.54  E-value=1.8e-13  Score=115.48  Aligned_cols=113  Identities=24%  Similarity=0.259  Sum_probs=78.6

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.|+.|.|+|++++++||+++|||++..+..      ..+++........+.+.+...       ...+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~v   68 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKA-------PSAALSYIGFRV   68 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeC-------CCcCccEEEEEe
Confidence            3579999999999999999999999999876532      123333211111333444321       124688999999


Q ss_pred             CC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          198 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       198 ~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      ++   ++++.++|    +++|+++...+.+  + ..+.+||+|||||.|||+....
T Consensus        69 ~~~~dl~~~~~~l----~~~Gv~v~~~~~~--~-~~~~~~~~DPdG~~iEl~~~~~  117 (294)
T TIGR02295        69 SKEEDLDKAADFF----QKLGHPVRLVRDG--G-QPEALRVEDPFGYPIEFYFEME  117 (294)
T ss_pred             CCHHHHHHHHHHH----HhcCCcEEeecCC--C-CceEEEEECCCCCEEEEEEchh
Confidence            85   44445555    8999998765432  2 3489999999999999997543

The enzyme from Bacillus brevis contains manganese.

>PRK10291 glyoxalase I; Provisional

Probab=99.53  E-value=1.5e-13  Score=101.70  Aligned_cols=91  Identities=52%  Similarity=0.999  Sum_probs=68.5

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCC-----
Q 025083           28 VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED-----  102 (258)
Q Consensus        28 ~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~d-----  102 (258)
                      +|.|+|+++|++||+++|||++..+...++..+..+++..++......+++....+..+...+.++.|+||.|+|     
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            478999999999999999999887665555566778877654333445677654443333445688999999998     


Q ss_pred             ----------------------------CCCCcEEEEEECCCCC
Q 025083          103 ----------------------------DPDGYIFELIQRGPTP  118 (258)
Q Consensus       103 ----------------------------DP~G~~iel~~~~~~~  118 (258)
                                                  ||||+.|||++.....
T Consensus        81 ~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~  124 (129)
T PRK10291         81 EKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  124 (129)
T ss_pred             HHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccccc
Confidence                                        9999999999876433

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=3e-13  Score=97.75  Aligned_cols=104  Identities=21%  Similarity=0.219  Sum_probs=71.4

Q ss_pred             eeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHH
Q 025083          124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKS  203 (258)
Q Consensus       124 v~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~  203 (258)
                      ..|.|+|+++|++||++ |||++.....      ..+++..+    ...+.+......    ...+..+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLG----NCAFYLQDYYVK----DWAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcC----CEEEEeecCCCc----ccccCCEEEEEECCHHHH
Confidence            56889999999999987 9999876531      13445433    233434321111    112345789999999999


Q ss_pred             HHHHHHHHHHhCCeee-----cCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          204 AEVVNLVTQELGGKIT-----RQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       204 ~~~l~~~~~~~G~~i~-----~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      +++|    +++|+++.     .+|...+ .+.+.++|+|||||+|+|.+
T Consensus        70 ~~~l----~~~G~~~~~~~~~~~~~~~~-~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHI----KALGLPKKFPGVKLPPITQP-WWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHH----HHcCCcccccceecCccccC-CCcEEEEEECCCccEEEeeC
Confidence            9999    88998753     2333223 34689999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.51  E-value=4.6e-13  Score=97.52  Aligned_cols=110  Identities=25%  Similarity=0.243  Sum_probs=72.9

Q ss_pred             eeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCC-----c-ccccCCceeeEEEEE
Q 025083          124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV-----T-EYTKGNAYAQVAIST  197 (258)
Q Consensus       124 v~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-----~-~~~~~~g~~hi~~~v  197 (258)
                      |.|.|+|++++.+||+++|||++..+..   .  ...++..+    ...+.+......     . ....+.+..|++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~~---~--~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADSN---D--GVAFFQLG----GLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccCC---C--ceEEEEcC----CeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            6899999999999999999999876511   1  22334432    234554432110     0 011222344566666


Q ss_pred             C---ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          198 D---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       198 ~---d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      .   |++++++++    +++|+++..+|...++ +++.++++||+||+|||..
T Consensus        73 ~~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARA----AAAGATIVKPPQDVFW-GGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHH----HhCCCEEecCCccCCC-CceEEEEECCCCCEEEEee
Confidence            4   566666666    8999999887765543 4688999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.50  E-value=2.1e-13  Score=97.95  Aligned_cols=95  Identities=18%  Similarity=0.221  Sum_probs=74.5

Q ss_pred             eeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc--cccCCceeeEEEEECC
Q 025083          122 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAISTDD  199 (258)
Q Consensus       122 ~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hi~~~v~d  199 (258)
                      +||+|.|+|++++.+||+++||++.......+..+....++..+.+  ...++|.++.....  ...+.|++||+|.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~--~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG--PVQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE--TEEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC--cEEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            5999999999999999999999998776655555566677665542  36788887655432  2356799999999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeecCC
Q 025083          200 VYKSAEVVNLVTQELGGKITRQP  222 (258)
Q Consensus       200 ~~~~~~~l~~~~~~~G~~i~~~p  222 (258)
                      +++..++|    +++|+++...+
T Consensus        79 ~d~~~~~l----~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARL----EAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHH----HHTTECEEECE
T ss_pred             HHHHHHHH----HHCCCEEcccC
Confidence            99999999    89999987653

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.49  E-value=4.4e-13  Score=112.68  Aligned_cols=116  Identities=15%  Similarity=0.120  Sum_probs=78.4

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .++.|++|.|+|+++|++||+++|||++..+..  .   ...++..+.  .++.+.+....       ..+..|++|.|+
T Consensus         2 ~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~---~~~~~~~~~--~~~~~~l~~~~-------~~~~~~~~f~V~   67 (286)
T TIGR03213         2 RGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--N---DALYLRLDS--RAHRIAVHPGE-------SDDLAYAGWEVA   67 (286)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--C---ceEEEEcCC--CceEEEEEECC-------cCCeeeEeeeeC
Confidence            468999999999999999999999998765321  1   123444432  13444443211       236789999999


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCcc--CCCCCeeEEEEECCCCCEEEEEcch
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGP--IPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~--~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |. +.++++.++|+++|+++...|..  ...+.++.++|+|||||.|||+...
T Consensus        68 ~~-~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~  119 (286)
T TIGR03213        68 DE-AGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGA  119 (286)
T ss_pred             CH-HHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcc
Confidence            93 23334444448999998765532  1122357899999999999998643

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.43  E-value=2e-12  Score=94.60  Aligned_cols=77  Identities=25%  Similarity=0.381  Sum_probs=51.8

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc---ccCCCCeeeEEEE
Q 025083           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS---YDIGTGFGHLAIA   99 (258)
Q Consensus        23 ~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~hia~~   99 (258)
                      +++||+|.|+|++++++||+++|||++......+...+..+|+..++   ...+++........   .....|+.|+||.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            57999999999999999999999999765433333334556666532   23566654322111   1223578999999


Q ss_pred             cCC
Q 025083          100 TED  102 (258)
Q Consensus       100 v~d  102 (258)
                      |+|
T Consensus        78 v~~   80 (125)
T cd07241          78 VGS   80 (125)
T ss_pred             CCC
Confidence            975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.42  E-value=2.9e-12  Score=96.32  Aligned_cols=91  Identities=22%  Similarity=0.315  Sum_probs=63.7

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCC-----------CCeEEEEeccCCCCceeEEEEEeecCCC----
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----------EKYSNAFLGFGPEQSYFVVELTYNYGVT----   85 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~----   85 (258)
                      +++++||+|.|+|+++|++||++ |||++..+...++           .....+++..  ..+...++|.......    
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~g~~~iel~~~~~~~~~~~   77 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRT--PDGHSRLELSKFHHPAVIAD   77 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeC--CCCCceEEEEEecCCCCcCc
Confidence            47899999999999999999998 9999875532211           1233445542  2234567877643211    


Q ss_pred             ---cccCCCCeeeEEEEcCC--------------------------------CCCCcEEEEEEC
Q 025083           86 ---SYDIGTGFGHLAIATED--------------------------------DPDGYIFELIQR  114 (258)
Q Consensus        86 ---~~~~~~~~~hia~~v~d--------------------------------DP~G~~iel~~~  114 (258)
                         ....+.|+.||||.|+|                                ||||+.|||++.
T Consensus        78 ~~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          78 HRPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence               11224578999999998                                999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.41  E-value=4e-12  Score=92.58  Aligned_cols=79  Identities=52%  Similarity=0.990  Sum_probs=55.7

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCC-CcccCCCCeeeEEEEcCC
Q 025083           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-TSYDIGTGFGHLAIATED  102 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~hia~~v~d  102 (258)
                      +.||+|.|+|++++++||+++||+++......+++.+..+++..+.......+++...... .+...+.+..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5799999999999999999999999886654444455667777543113445666554332 222334578899999998

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.39  E-value=5.3e-12  Score=97.16  Aligned_cols=92  Identities=30%  Similarity=0.347  Sum_probs=63.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeee----cc--------------CCCCeEEEEeccCCCCceeEEEEEeecC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKR----DV--------------PEEKYSNAFLGFGPEQSYFVVELTYNYG   83 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~l~l~~~~~   83 (258)
                      ++++||+|.|+|+++|++||+++|||++..+.    ..              .......+++..++   ...|+|.....
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~~   79 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFKN   79 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEeccC
Confidence            67999999999999999999999999875321    10              01124456665432   33477776543


Q ss_pred             CCcc-----cCCCCeeeEEEEcCC------------------------------------CCCCcEEEEEECCC
Q 025083           84 VTSY-----DIGTGFGHLAIATED------------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus        84 ~~~~-----~~~~~~~hia~~v~d------------------------------------DP~G~~iel~~~~~  116 (258)
                      ....     ..+.|+.|+||.|+|                                    ||||+.|||++...
T Consensus        80 ~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        80 QENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            2111     124688999999988                                    89999999988763

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.38  E-value=1.3e-11  Score=98.95  Aligned_cols=120  Identities=22%  Similarity=0.237  Sum_probs=88.6

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc-cccCCceeeEEE
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAI  195 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~  195 (258)
                      .+..+..+.|.|+|++++..||+++||+++..+..      ..+.++.++   ...|.|.+.+.... .+...|..|++|
T Consensus         7 ~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg---~~LL~L~q~~~a~~~~~~~aGLyH~Af   77 (265)
T COG2514           7 TPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGG---TPLLTLEQFPDARRPPPRAAGLYHTAF   77 (265)
T ss_pred             CCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCC---EEEEEEEeCCCCCCCCccccceeeeee
Confidence            46678899999999999999999999999988753      224455443   35666766554432 345569999999


Q ss_pred             EECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          196 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       196 ~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      .+++..++...| ..+...|+.+. ++.++.  -...+||.||+||-||++...
T Consensus        78 LlP~r~~L~~~l-~hl~~~~~~l~-Ga~DH~--vSEAlYl~DPEGNGIEiYaDr  127 (265)
T COG2514          78 LLPTREDLARVL-NHLAEEGIPLV-GASDHL--VSEALYLEDPEGNGIEIYADR  127 (265)
T ss_pred             ecCCHHHHHHHH-HHHHhcCCccc-ccCcch--hheeeeecCCCCCeEEEEecC
Confidence            999965555444 55678888886 444433  246899999999999999764

>PRK11478 putative lyase; Provisional

Probab=99.37  E-value=7.6e-12  Score=92.28  Aligned_cols=79  Identities=19%  Similarity=0.273  Sum_probs=50.1

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCC-CCeEEEEeccCCCCceeEEEEEeecC-C--CcccCCCCeee
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYG-V--TSYDIGTGFGH   95 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~-~--~~~~~~~~~~h   95 (258)
                      .+.+++||+|.|+|++++++||+++|||++..+...+. ..+... +..+   ....+++..... .  .......|+.|
T Consensus         3 ~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~---~~~~l~l~~~~~~~~~~~~~~~~g~~h   78 (129)
T PRK11478          3 GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGD-LALN---GQYVIELFSFPFPPERPSRPEACGLRH   78 (129)
T ss_pred             CcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceee-EecC---CCcEEEEEEecCCCCCCCCCCCCceeE
Confidence            36789999999999999999999999999864422111 122211 2221   123566654221 1  11122357889


Q ss_pred             EEEEcCC
Q 025083           96 LAIATED  102 (258)
Q Consensus        96 ia~~v~d  102 (258)
                      +||.|+|
T Consensus        79 i~f~v~d   85 (129)
T PRK11478         79 LAFSVDD   85 (129)
T ss_pred             EEEEeCC
Confidence            9999998

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.35  E-value=1.3e-11  Score=90.16  Aligned_cols=82  Identities=21%  Similarity=0.346  Sum_probs=58.9

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~   99 (258)
                      .+++++|++|.|+|+++|++||+++||+++..+..      ..+|+...+......+.+...       ...++.|+||.
T Consensus         3 ~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af~   69 (121)
T cd09013           3 DIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------PEAGLGHIAWR   69 (121)
T ss_pred             CccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------CCCceEEEEEE
Confidence            47899999999999999999999999999876532      134444322222334444321       13478899999


Q ss_pred             cCC----------------------------------CCCCcEEEEEEC
Q 025083          100 TED----------------------------------DPDGYIFELIQR  114 (258)
Q Consensus       100 v~d----------------------------------DP~G~~iel~~~  114 (258)
                      |++                                  ||+|+.||++..
T Consensus        70 v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          70 ASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             cCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEe
Confidence            976                                  999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.35  E-value=1.6e-11  Score=92.57  Aligned_cols=73  Identities=15%  Similarity=0.243  Sum_probs=49.2

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCC-eEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEE
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEK-YSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~   99 (258)
                      +++++||+|.|+|++++++||+++|||++..+...+++. ...+|+..+.  ....+.+...       .+.++.|+||.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~--~~h~~~~~~~-------~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSN--KPHDIAFVGG-------PDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCC--CcceEEEecC-------CCCCceEEEEE
Confidence            678999999999999999999999999987654322222 2344554332  2223333211       13478899999


Q ss_pred             cCC
Q 025083          100 TED  102 (258)
Q Consensus       100 v~d  102 (258)
                      |+|
T Consensus        75 v~d   77 (143)
T cd07243          75 LES   77 (143)
T ss_pred             cCC
Confidence            987

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.33  E-value=3.3e-11  Score=88.29  Aligned_cols=86  Identities=29%  Similarity=0.464  Sum_probs=61.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCC-cccCCCCeeeEEEEc
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT-SYDIGTGFGHLAIAT  100 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~~hia~~v  100 (258)
                      |+++||.|.|+|++++++||+++|||++....   +   ..+++..++  ....+.+....... ......+..|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~---~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERT---D---STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C---CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            68999999999999999999999999997652   1   234455332  23455554432221 122345788999999


Q ss_pred             CC---------------------------------CCCCcEEEEEECC
Q 025083          101 ED---------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus       101 ~d---------------------------------DP~G~~iel~~~~  115 (258)
                      ++                                 ||+|+.||++...
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~~  120 (125)
T cd07255          73 PSRADLAAALRRLIELGIPLVGASDHLVSEALYLSDPEGNGIEIYADR  120 (125)
T ss_pred             CCHHHHHHHHHHHHHcCCceeccccccceeEEEEECCCCCEEEEEEec
Confidence            86                                 9999999998764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.32  E-value=2.8e-11  Score=90.12  Aligned_cols=71  Identities=24%  Similarity=0.297  Sum_probs=49.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~  101 (258)
                      .+++||+|.|+|+++|++||+++||+++..+..  .   ..+|+..++......+.+.....     ...++.|+||.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEeC
Confidence            579999999999999999999999999875532  1   23455543222334455543211     1358899999998


Q ss_pred             C
Q 025083          102 D  102 (258)
Q Consensus       102 d  102 (258)
                      |
T Consensus        72 d   72 (134)
T cd08360          72 D   72 (134)
T ss_pred             C
Confidence            8

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.31  E-value=3.5e-11  Score=92.53  Aligned_cols=72  Identities=22%  Similarity=0.271  Sum_probs=46.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~  101 (258)
                      ++++||+|.|+|+++|++||+++|||++......+.+.....++..++  ....+.+..       ..+.++.|+||.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~--~~~~i~l~~-------~~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKG--GVHDTALTG-------GNGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCC--CcceEEEec-------CCCCceeEEEEEcC
Confidence            789999999999999999999999999865433222322334444322  122333321       12346788888887


Q ss_pred             C
Q 025083          102 D  102 (258)
Q Consensus       102 d  102 (258)
                      +
T Consensus        73 ~   73 (161)
T cd07256          73 E   73 (161)
T ss_pred             C
Confidence            5

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.31  E-value=3e-11  Score=90.55  Aligned_cols=72  Identities=21%  Similarity=0.462  Sum_probs=47.8

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~   99 (258)
                      |+.+++||.|.|+|++++++||+++|||++..+..      ..+++..++    ..+.+...........+.++.|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g----~~l~l~~~~~~~~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNG----LWIALNEEKDIPRNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCC----eEEEeeccCCCCCccCCCCeeEEEEE
Confidence            67889999999999999999999999999875421      234444321    23444322111111223467899999


Q ss_pred             cC
Q 025083          100 TE  101 (258)
Q Consensus       100 v~  101 (258)
                      ++
T Consensus        71 v~   72 (139)
T PRK04101         71 IE   72 (139)
T ss_pred             ec
Confidence            87

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.30  E-value=2.8e-11  Score=88.47  Aligned_cols=70  Identities=24%  Similarity=0.293  Sum_probs=45.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      +++++||.|.|+|+++|++||+++|||++.....  .+   .+|+..........+.+..       ....++.|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~~-------~~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG---RVYLKAWDEFDHHSIVLRE-------ADTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc---eEEEEccCCCcccEEEecc-------CCCCCeeEEEEEe
Confidence            6899999999999999999999999999875431  11   2333321111223333321       1134678899988


Q ss_pred             CC
Q 025083          101 ED  102 (258)
Q Consensus       101 ~d  102 (258)
                      ++
T Consensus        70 ~~   71 (122)
T cd07265          70 LD   71 (122)
T ss_pred             CC
Confidence            74

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.29  E-value=1.6e-11  Score=93.65  Aligned_cols=73  Identities=26%  Similarity=0.388  Sum_probs=48.1

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccC-CCCeEEEEeccCCCCc---eeEEEEEeecCCCcccCCCCeeeEEE
Q 025083           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-EEKYSNAFLGFGPEQS---YFVVELTYNYGVTSYDIGTGFGHLAI   98 (258)
Q Consensus        23 ~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~hia~   98 (258)
                      +++||+|.|+|+++|++||+++||+++......+ .+....+|+..++...   ...+.+..       ..+.++.||||
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            5899999999999999999999999987554332 2223566666532110   00111110       11468899999


Q ss_pred             EcCC
Q 025083           99 ATED  102 (258)
Q Consensus        99 ~v~d  102 (258)
                      .|+|
T Consensus        74 ~v~d   77 (153)
T cd07257          74 EVHD   77 (153)
T ss_pred             EcCC
Confidence            9987

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.27  E-value=8e-11  Score=90.08  Aligned_cols=87  Identities=18%  Similarity=0.246  Sum_probs=60.5

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc-ccCCCCeeeEEEEcC
Q 025083           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLAIATE  101 (258)
Q Consensus        23 ~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hia~~v~  101 (258)
                      +++||+|.|+|+++|++||+++|||++..+..   +  ...+...+. ..+..|.+........ .....++.|+||.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            47999999999999999999999999876532   1  233333221 2234566655322111 122347889999998


Q ss_pred             C---------------------------------CCCCcEEEEEECC
Q 025083          102 D---------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus       102 d---------------------------------DP~G~~iel~~~~  115 (258)
                      |                                 ||+|+.||++...
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERLEALGLPVSGIVDRFYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCcccccccccEEEEEEECCCCcEEEEEECC
Confidence            7                                 9999999999764

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.27  E-value=8.8e-11  Score=87.65  Aligned_cols=87  Identities=16%  Similarity=0.237  Sum_probs=61.4

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc------ccCCCCeeeEE
Q 025083           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS------YDIGTGFGHLA   97 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~hia   97 (258)
                      ++|++|.|+|++++++||+++|||++..+...+  .....++..    +...+.+..+.....      ...+.+..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~----g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQ----GDINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEc----CCEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            589999999999999999999999987654322  123344432    223455543322111      12346788999


Q ss_pred             EEcCC--------------------------------CCCCcEEEEEECCC
Q 025083           98 IATED--------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus        98 ~~v~d--------------------------------DP~G~~iel~~~~~  116 (258)
                      |.|+|                                ||+|+.|+++++.+
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~  125 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKG  125 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecCC
Confidence            99998                                99999999999764

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.26  E-value=4.4e-11  Score=87.88  Aligned_cols=76  Identities=32%  Similarity=0.476  Sum_probs=51.3

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc------ccCCCCeeeE
Q 025083           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS------YDIGTGFGHL   96 (258)
Q Consensus        23 ~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~hi   96 (258)
                      +++|+.|.|+|++++++||+++|||++......++.....+++..++    ..++|..+.....      ...+.++.|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGN----TKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCC----EEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            58999999999999999999999999865432233334556665432    3466654322111      0124577899


Q ss_pred             EEEcCC
Q 025083           97 AIATED  102 (258)
Q Consensus        97 a~~v~d  102 (258)
                      ||.|+|
T Consensus        77 ~~~v~d   82 (128)
T TIGR03081        77 AIEVDD   82 (128)
T ss_pred             EEEcCC
Confidence            999998

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.26  E-value=7.9e-11  Score=86.11  Aligned_cols=80  Identities=16%  Similarity=0.228  Sum_probs=49.6

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCC-CeEEEEeccCCCCceeEEEEEeecCCCc--ccCCCCeeeEEEE
Q 025083           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-KYSNAFLGFGPEQSYFVVELTYNYGVTS--YDIGTGFGHLAIA   99 (258)
Q Consensus        23 ~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~hia~~   99 (258)
                      +++||+|.|+|++++++||+++|||++..+....+. .....++..........++|........  .....++.|+||.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            478999999999999999999999998766543221 1122333221112233566654322211  1123467899999


Q ss_pred             cCC
Q 025083          100 TED  102 (258)
Q Consensus       100 v~d  102 (258)
                      |++
T Consensus        81 v~~   83 (126)
T cd08346          81 VPS   83 (126)
T ss_pred             cCC
Confidence            985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.25  E-value=7.6e-11  Score=93.08  Aligned_cols=99  Identities=19%  Similarity=0.323  Sum_probs=72.6

Q ss_pred             CCceeeeEEec--ChhhHHHHHHHhcCCeEeeeecCCc--cceeEEEeeecCCCceeEEEEEEecCC-c--------ccc
Q 025083          119 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYGV-T--------EYT  185 (258)
Q Consensus       119 ~~i~hv~l~v~--d~~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~-~--------~~~  185 (258)
                      .+++|+++.|+  |++++.+||+++|||+.......++  .+.....+..+.  ....+.|...... .        ...
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~--g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD--GKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC--CcEEEEEecCCCCCCccHHHHHHHHh
Confidence            46899999999  9999999999999999877654332  233444454332  2556666643321 1        012


Q ss_pred             cCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCc
Q 025083          186 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  223 (258)
Q Consensus       186 ~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~  223 (258)
                      .|.|++||||.|+|+++.++++    +++|+++...|.
T Consensus        80 ~G~Gv~HIAf~vdDI~~~~~~L----~~~Gv~~l~~P~  113 (191)
T cd07250          80 GGAGVQHIALATDDIFATVAAL----RARGVEFLPIPD  113 (191)
T ss_pred             CCCceeEEEEECCCHHHHHHHH----HHcCCeeccCch
Confidence            4679999999999999999999    899999987763

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.24  E-value=1.2e-10  Score=84.90  Aligned_cols=77  Identities=26%  Similarity=0.378  Sum_probs=49.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCC-CCeEEEEeccCCCCceeEEEEEeecCC--C-cccCCCCeeeEE
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGV--T-SYDIGTGFGHLA   97 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~--~-~~~~~~~~~hia   97 (258)
                      .+++||+|.|+|++++++||+++|||++......++ ..+.. .+...   ....+++......  . ....+.++.|++
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~~---~~~~i~l~~~~~~~~~~~~~~~~g~~h~~   77 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLLN---GGYQLELFSFPNPPERPSYPEACGLRHLA   77 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEecC---CCcEEEEEEcCCCCCCCCCCcCCCceEEE
Confidence            579999999999999999999999999875532222 22322 22211   1234555432221  1 111245788999


Q ss_pred             EEcCC
Q 025083           98 IATED  102 (258)
Q Consensus        98 ~~v~d  102 (258)
                      |.|+|
T Consensus        78 ~~v~d   82 (125)
T cd08352          78 FSVED   82 (125)
T ss_pred             EEeCC
Confidence            99998

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.24  E-value=1.7e-10  Score=79.99  Aligned_cols=122  Identities=20%  Similarity=0.227  Sum_probs=76.0

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc--cccCC--ceee--
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGN--AYAQ--  192 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~--g~~h--  192 (258)
                      ..+.|+++.|+|++++++||.++||++..++.+.-   ...-|++     ...+.-+......+.  ...+.  -..|  
T Consensus         3 ~~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd~w---vdfDfyG-----HQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfG   74 (138)
T COG3565           3 PVPFHLAIPVNDLDETRRFYGEVLGCKEGRSTDTW---VDFDFYG-----HQVVAHLTPQPDSQGSGKVDGHGVPPPHFG   74 (138)
T ss_pred             ccceEEeeeccccHHHHhhhhhhcccccccccceE---EEeeecc-----cEEEEEecCCcccccCcccCCCCCCCccce
Confidence            34789999999999999999999999876654210   0111111     112222211111100  01111  1223  


Q ss_pred             EEEEECChHHHHHHHHHHHHHhCCeeecCCccC---CCCCeeEEEEECCCCCEEEEEcchhhh
Q 025083          193 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPI---PGLNTKITSFVDPDGWKTVLVDNEDFL  252 (258)
Q Consensus       193 i~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~---~~~~~~~~~~~DPdG~~iel~~~~~~~  252 (258)
                      +.+.++|.-++.++|    +++|+....+|...   ..+..+.+|+.||.||.+|+-.-.++.
T Consensus        75 vVl~~edW~alaerl----ea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR~~e  133 (138)
T COG3565          75 VVLPVEDWFALAERL----EAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFRDQE  133 (138)
T ss_pred             EEEEHHHHHHHHHHH----HHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecccchh
Confidence            557778888888888    89999998887542   122357899999999999997655443

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.23  E-value=2e-10  Score=85.29  Aligned_cols=89  Identities=24%  Similarity=0.428  Sum_probs=61.5

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCC
Q 025083           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (258)
Q Consensus        23 ~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~d  102 (258)
                      +++||.|.|+|++++++||+++|||++....+.  .  ..+|+..+ ......+.+.............++.|++|.|++
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~-~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRD-PDEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEec-CCCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            589999999999999999999999998765321  1  23455432 122334555443222111234578899999987


Q ss_pred             ---------------------------------CCCCcEEEEEECCC
Q 025083          103 ---------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus       103 ---------------------------------DP~G~~iel~~~~~  116 (258)
                                                       ||+|+.||++...+
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~  122 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPVDHGNAWSIYFRDPDGNRLELFVDTP  122 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccCCCCceeEEEEECCCCCEEEEEEcCC
Confidence                                             99999999997653

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.23  E-value=1.9e-10  Score=88.91  Aligned_cols=77  Identities=21%  Similarity=0.267  Sum_probs=50.3

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~   99 (258)
                      .+.+++|++|.|+|++++++||+++|||++......+.+.....|+....  ....+.+....  .  ....++.|+||.
T Consensus         3 ~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~--~--~~~~~~~hiaf~   76 (166)
T cd09014           3 GVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSN--KVHDVAYTRDP--A--GARGRLHHLAYA   76 (166)
T ss_pred             CcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCC--CceeEEEecCC--C--CCCCCceEEEEE
Confidence            36899999999999999999999999999876543332222345555322  22233332211  1  112367899999


Q ss_pred             cCC
Q 025083          100 TED  102 (258)
Q Consensus       100 v~d  102 (258)
                      |+|
T Consensus        77 v~~   79 (166)
T cd09014          77 LDT   79 (166)
T ss_pred             CCC
Confidence            986

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.22  E-value=1.2e-10  Score=88.87  Aligned_cols=74  Identities=19%  Similarity=0.275  Sum_probs=49.7

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccC---CCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEE
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP---EEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia   97 (258)
                      .++++||+|.|+|++++++||+++|||++......+   ++....+|+..++  ....+.+...      ..+.++.|+|
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~i~~~~~------~~~~g~~Hia   78 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNG--RHHSLALAEG------PGPKRIHHLM   78 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCC--CCCCEEEEcC------CCCceeEEEE
Confidence            578999999999999999999999999986543221   1123456665432  2223333221      1135789999


Q ss_pred             EEcCC
Q 025083           98 IATED  102 (258)
Q Consensus        98 ~~v~d  102 (258)
                      |.|+|
T Consensus        79 f~V~d   83 (154)
T cd07237          79 LEVTS   83 (154)
T ss_pred             EEcCC
Confidence            99976

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>PRK06724 hypothetical protein; Provisional

Probab=99.21  E-value=1.8e-10  Score=85.03  Aligned_cols=33  Identities=24%  Similarity=0.476  Sum_probs=28.2

Q ss_pred             ccccceeeEEEEEeCCHHHHHHHHHHhc---CCEEe
Q 025083           18 KKDKRRFLHAVYRVGDLDRTIKYYTECF---GMELL   50 (258)
Q Consensus        18 ~~~~~~~~hv~l~v~dl~~s~~FY~~~l---G~~~~   50 (258)
                      ..|+.+++||+|.|+|+++|++||+++|   |++..
T Consensus         2 ~~~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~   37 (128)
T PRK06724          2 NTLRAGIHHIEFWVANLEESISFYDMLFSIIGWRKL   37 (128)
T ss_pred             CccCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEe
Confidence            4577889999999999999999999966   66653

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.20  E-value=2.5e-10  Score=83.22  Aligned_cols=33  Identities=24%  Similarity=0.490  Sum_probs=30.3

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      +++++.|+.|.|+|++++++||+++|||++...
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~   33 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEE   33 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEecc
Confidence            468999999999999999999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.18  E-value=2.5e-10  Score=83.48  Aligned_cols=32  Identities=34%  Similarity=0.713  Sum_probs=29.9

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEeeeec
Q 025083           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRD   54 (258)
Q Consensus        23 ~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~   54 (258)
                      |++||+|.|+|++++++||+++|||++.....
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~   32 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESD   32 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeec
Confidence            68999999999999999999999999987765

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.18  E-value=2.9e-10  Score=82.11  Aligned_cols=79  Identities=28%  Similarity=0.505  Sum_probs=57.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~  101 (258)
                      |+++|+.|.|+|++++++||+++|||++.....      ..+++..+. ...+.+.+...       ...+..|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~-------~~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEG-------DEPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeC-------CCCCceeEEEEcC
Confidence            689999999999999999999999999886532      124444331 23334444322       1246789999998


Q ss_pred             C-----------------------------------CCCCcEEEEEEC
Q 025083          102 D-----------------------------------DPDGYIFELIQR  114 (258)
Q Consensus       102 d-----------------------------------DP~G~~iel~~~  114 (258)
                      +                                   ||+|+.+|++..
T Consensus        67 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          67 SEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence            5                                   999999999865

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.18  E-value=3.6e-10  Score=83.78  Aligned_cols=33  Identities=18%  Similarity=0.241  Sum_probs=30.2

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      |+.+++||+|.|+|+++|++||+++||+++..+
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~   33 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYS   33 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEe
Confidence            577899999999999999999999999987655

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.18  E-value=3.7e-11  Score=88.23  Aligned_cols=94  Identities=37%  Similarity=0.562  Sum_probs=67.1

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCC---------------CceeEEEEEeecCCC
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPE---------------QSYFVVELTYNYGVT   85 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~   85 (258)
                      ...++|.+++|.|+.+|+.||++++|+.+..........+..+|++....               .....+||+++++..
T Consensus        20 t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gte   99 (170)
T KOG2944|consen   20 TYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTE   99 (170)
T ss_pred             hhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCC
Confidence            45679999999999999999999999998765433332333344433100               123368888887753


Q ss_pred             cc---------cCCCCeeeEEEEcCC-------------------------------CCCCcEEEEEEC
Q 025083           86 SY---------DIGTGFGHLAIATED-------------------------------DPDGYIFELIQR  114 (258)
Q Consensus        86 ~~---------~~~~~~~hia~~v~d-------------------------------DP~G~~iel~~~  114 (258)
                      ..         ..++|++||||.|+|                               ||||+.||+...
T Consensus       100 s~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  100 SPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeec
Confidence            21         233699999999999                               999999999864

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.18  E-value=2.9e-10  Score=82.02  Aligned_cols=79  Identities=23%  Similarity=0.373  Sum_probs=53.6

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      +++++||.|.|+|+++|++||++ |||++..+.   ++   .+|+..++ .....+.+..       ....++.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~---~~---~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAART---DD---ELYYRGYG-TDPFVYVARK-------GEKARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEec---CC---eEEEecCC-CccEEEEccc-------CCcCcccEEEEEE
Confidence            47899999999999999999999 999986542   11   23443221 1222221111       0124677888888


Q ss_pred             CC-------------------------------CCCCcEEEEEEC
Q 025083          101 ED-------------------------------DPDGYIFELIQR  114 (258)
Q Consensus       101 ~d-------------------------------DP~G~~iel~~~  114 (258)
                      +|                               ||+|+.|||+..
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEec
Confidence            87                               999999999865

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.17  E-value=1.9e-10  Score=85.29  Aligned_cols=69  Identities=25%  Similarity=0.469  Sum_probs=44.0

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCC
Q 025083           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~d  102 (258)
                      |+||+|.|+|++++++||+++|||++....+      ..+++..++    ..+.+.............++.|++|.|++
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~hiaf~v~~   69 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGG----TWLALNEEPDIPRNEIRQSYTHIAFTIED   69 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCc----eEEEEEccCCCCcCCcCccceEEEEEecH
Confidence            6899999999999999999999999865321      122334322    23444332221111123467899999874

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.17  E-value=2.9e-10  Score=83.43  Aligned_cols=33  Identities=12%  Similarity=0.299  Sum_probs=30.1

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      ++.++.||.|.|+|+++|++||+++|||++..+
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~   35 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAER   35 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccC
Confidence            478999999999999999999999999998644

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.17  E-value=3e-10  Score=85.30  Aligned_cols=66  Identities=15%  Similarity=0.218  Sum_probs=45.7

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCC
Q 025083           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (258)
Q Consensus        25 ~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~d  102 (258)
                      .||.|.|+|++++++||+++|||++..+..   .  ..+|+...+......+.+..       ....++.|+||.|++
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~---~--~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~   66 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE---D--RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTD   66 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC---C--EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCC
Confidence            499999999999999999999999876532   1  35666643322223332211       123589999999987

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.15  E-value=7e-11  Score=96.08  Aligned_cols=194  Identities=21%  Similarity=0.391  Sum_probs=119.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc-------ccCCCCe
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-------YDIGTGF   93 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-------~~~~~~~   93 (258)
                      ..+++||.+.|.|...+..||+..|||+.......+.+....+-....  ++.+...+..+..+..       .+.|.|+
T Consensus        15 ~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr--~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgv   92 (381)
T KOG0638|consen   15 FLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALR--QGKIVFVFNSAYNPDNSEYGDHLVKHGDGV   92 (381)
T ss_pred             eeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhh--cCCEEEEEecCCCCCchhhhhhhhhcccch
Confidence            468999999999999999999999999987533222211111111111  1222333333322211       2346778


Q ss_pred             eeEEEEcCC-----------------------CCCCcE-EEEE-----------ECC-------------C---------
Q 025083           94 GHLAIATED-----------------------DPDGYI-FELI-----------QRG-------------P---------  116 (258)
Q Consensus        94 ~hia~~v~d-----------------------DP~G~~-iel~-----------~~~-------------~---------  116 (258)
                      ..+||.|+|                       |-+|.. +..+           ++.             +         
T Consensus        93 kdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~FLPGF~~v~~~~~fp~l~  172 (381)
T KOG0638|consen   93 KDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGPFLPGFEPVSSDALFPKLP  172 (381)
T ss_pred             hceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccccCCCCcccCccccccCCCC
Confidence            899999998                       555642 2222           111             0         


Q ss_pred             --CCCCceeeeEEec--ChhhHHHHHHHhcCCeEeeeecCCcc-----ceeEEEeeecCCCceeEEEEEEecCCc-----
Q 025083          117 --TPEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPEL-----KCALAMLGYAEEDQTTVLELAYSYGVT-----  182 (258)
Q Consensus       117 --~~~~i~hv~l~v~--d~~~s~~FY~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~l~~~~~~~-----  182 (258)
                        ...+++|++..++  .++.+.+||.+.|||......+++.-     ..+.+.+.  +.  ..++.+.-+....     
T Consensus       173 ~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vla--n~--~esi~mpinEp~~G~k~k  248 (381)
T KOG0638|consen  173 KGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLA--NY--EESIKMPINEPAPGKKKK  248 (381)
T ss_pred             ccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHh--cC--CccEEEeccCCCCCCccH
Confidence              1247889999999  68999999999999987766553321     01111122  11  1222222221110     


Q ss_pred             -------ccccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCcc
Q 025083          183 -------EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGP  224 (258)
Q Consensus       183 -------~~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~  224 (258)
                             .+..|.|++||++.++||-.+.+.+    ++.|+++..+|..
T Consensus       249 sQIqeyv~y~gG~GvQHiaL~tedIi~Ai~~l----r~rG~eFLs~Ps~  293 (381)
T KOG0638|consen  249 SQIQEYVEYHGGAGVQHIALNTEDIIEAIRGL----RARGGEFLSPPST  293 (381)
T ss_pred             HHHHHHHHhcCCCceeeeeecchHHHHHHHHH----HhcCCccccCCHH
Confidence                   1456779999999999999999999    7889999887743

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.15  E-value=6.7e-10  Score=81.70  Aligned_cols=72  Identities=19%  Similarity=0.280  Sum_probs=48.0

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhc---CCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc---ccCCCCeeeE
Q 025083           23 RFLHAVYRVGDLDRTIKYYTECF---GMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS---YDIGTGFGHL   96 (258)
Q Consensus        23 ~~~hv~l~v~dl~~s~~FY~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~hi   96 (258)
                      +++||.|.|+|++++.+||+++|   ||++.....  ++   ..|...   .....+.+........   ...+.++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~~---~~~~~~---~~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--DG---RSWRAG---DGGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--cC---ceEEec---CCceEEEEEecccCCCcccccCCcCeeEE
Confidence            57999999999999999999999   999876532  11   122221   1234566654432211   1234578899


Q ss_pred             EEEcCC
Q 025083           97 AIATED  102 (258)
Q Consensus        97 a~~v~d  102 (258)
                      ||.|++
T Consensus        73 a~~v~~   78 (128)
T cd07242          73 AFRAPS   78 (128)
T ss_pred             EEEcCC
Confidence            999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.13  E-value=2.1e-09  Score=79.30  Aligned_cols=114  Identities=14%  Similarity=0.061  Sum_probs=70.1

Q ss_pred             eEEe-cChhhHHHHHHHhcCCeEeeeecCC----------ccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeE
Q 025083          125 MLRV-GDLGRSIKFYEKALGMKLLRTIDSP----------ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV  193 (258)
Q Consensus       125 ~l~v-~d~~~s~~FY~~~lG~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi  193 (258)
                      -|.+ .|.+++++||+++||+++......+          .+.+..+.+..++    ..+.+......... .+..-.++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g----~~l~~~d~~~~~~~-~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGG----QRLMASDGGPGFPF-TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECC----EEEEEEcCCCCCCC-CCCCCEEE
Confidence            4566 8999999999999999988765321          1222233344332    23433322211111 12234469


Q ss_pred             EEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEE
Q 025083          194 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  246 (258)
Q Consensus       194 ~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  246 (258)
                      ++.|+|++++ +++.+++.+ |.++..+|...++ +.+.++|+||+|+.|+|.
T Consensus        79 ~i~~~~~e~v-~~~~~~l~~-~g~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          79 SVECDSEEEA-DRLFEALSE-GGTVLMPLQKTFW-SPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEECCCHHHH-HHHHHHHhc-CCeEeccchhcCc-ccccEEEECCCCCEEEeC
Confidence            9999985433 333334455 5588888776654 468899999999999873

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.13  E-value=7.4e-10  Score=81.07  Aligned_cols=32  Identities=16%  Similarity=0.365  Sum_probs=29.6

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEee
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLR   51 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~   51 (258)
                      |.++++|+.|.|+|+++|++||+++|||++..
T Consensus         1 ~~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~   32 (123)
T cd08351           1 MTVTLNHTIVPARDREASAEFYAEILGLPWAK   32 (123)
T ss_pred             CcceEeEEEEEcCCHHHHHHHHHHhcCCEeee
Confidence            45789999999999999999999999999875

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.13  E-value=5.8e-10  Score=81.31  Aligned_cols=67  Identities=10%  Similarity=0.185  Sum_probs=44.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~  101 (258)
                      .++.||+|.|+|+++|++||+++|||++..+..   .  ..+++..++  .++.+.+...       ...++.|++|.++
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~--~~~~~~l~~~-------~~~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPE---D--GALYLRMDD--RAWRIAVHPG-------EADDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCC---C--CeEEEEccC--CceEEEEEeC-------CCCceeEEEEEEC
Confidence            368999999999999999999999999865421   1  123444322  2344444321       1235678888876


Q ss_pred             C
Q 025083          102 D  102 (258)
Q Consensus       102 d  102 (258)
                      +
T Consensus        67 ~   67 (120)
T cd07252          67 D   67 (120)
T ss_pred             C
Confidence            5

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.12  E-value=6.4e-10  Score=81.54  Aligned_cols=75  Identities=31%  Similarity=0.511  Sum_probs=52.6

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccC-CCCeEEEEeccCCCCceeEEEEEeecCCC-c-----ccCCCCeeeE
Q 025083           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-EEKYSNAFLGFGPEQSYFVVELTYNYGVT-S-----YDIGTGFGHL   96 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~-----~~~~~~~~hi   96 (258)
                      ++||+|.|+|++++++||+++|||+........ ++....+++..+    ...+++..+.... .     ...+.+..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999987654322 233445666542    3456666543321 1     1235788999


Q ss_pred             EEEcCC
Q 025083           97 AIATED  102 (258)
Q Consensus        97 a~~v~d  102 (258)
                      +|.|+|
T Consensus        77 ~f~v~d   82 (128)
T cd07249          77 AFEVDD   82 (128)
T ss_pred             EEEeCC
Confidence            999998

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.10  E-value=1.5e-09  Score=76.64  Aligned_cols=117  Identities=24%  Similarity=0.223  Sum_probs=70.8

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecC-------CcccccCCceee
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG-------VTEYTKGNAYAQ  192 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-------~~~~~~~~g~~h  192 (258)
                      ....|.|+|+|+++|.+||+ .|||+......+..   ...++- +.   ...+.|.....       +..-.....-.-
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~-alGfk~Npq~sde~---a~~mi~-~~---ni~vMLL~~~~fq~F~~~~i~dt~~s~evl   74 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYT-ALGFKFNPQFSDED---AACMII-SD---NIFVMLLEEARFQTFTKRQIADTTKSREVL   74 (133)
T ss_pred             eEEEEecchhhHHHHHHHHH-HhCcccCCCccccc---ceeEEE-ec---cEEEEEeccHHhhhhcccccccccCCceEE
Confidence            45689999999999999997 49999877654432   111111 11   22222322111       011122234556


Q ss_pred             EEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          193 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       193 i~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      |++.+.+- +.++.+-++..++|++...+|..+  +.....-|.|||||.||++-
T Consensus        75 i~ls~~s~-eevd~~v~ka~eaGGk~~~~~~d~--gfMYg~~fqDpDGh~wE~l~  126 (133)
T COG3607          75 ISLSAGSR-EEVDELVDKALEAGGKPANEPQDE--GFMYGRSFQDPDGHVWEFLW  126 (133)
T ss_pred             EEeccCcH-HHHHHHHHHHHHcCCCCCCCcccc--ccccceeeeCCCCCeEEEEE
Confidence            99999872 333333344489999987665543  22344559999999999974

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.10  E-value=1.1e-09  Score=79.87  Aligned_cols=74  Identities=30%  Similarity=0.428  Sum_probs=47.4

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCC---CcccCCCCeeeEE
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV---TSYDIGTGFGHLA   97 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~hia   97 (258)
                      +++++|+.|.|+|++++++||+++|||++......  ..+  +.+..++    ..+++......   .....+.+..|++
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~--~~~--~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~hi~   72 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEE--VGR--KALRFGS----QKINLHPVGGEFEPAAGSPGPGSDDLC   72 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeeccccc--CCc--eEEEeCC----EEEEEecCCCccCcCccCCCCCCceEE
Confidence            46899999999999999999999999998765321  112  2233222    23444432211   1112345778999


Q ss_pred             EEcCC
Q 025083           98 IATED  102 (258)
Q Consensus        98 ~~v~d  102 (258)
                      |.+++
T Consensus        73 ~~~~~   77 (125)
T cd07253          73 LITEP   77 (125)
T ss_pred             EEecc
Confidence            99864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.10  E-value=1.4e-09  Score=80.60  Aligned_cols=69  Identities=26%  Similarity=0.333  Sum_probs=47.2

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCC
Q 025083           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (258)
Q Consensus        25 ~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~d  102 (258)
                      +||.|.|+|++++++||+++||+++......+ +....+|+..++  ....+.+....      ...++.|++|.|+|
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~~------~~~~~~hl~~~v~d   69 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDE--DHHDLALFPGP------ERPGLHHVAFEVES   69 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCC--CcceEEEEcCC------CCCCeeEEEEEcCC
Confidence            59999999999999999999999987654432 223456666432  22344443211      13578899999886

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.10  E-value=6.8e-09  Score=76.34  Aligned_cols=116  Identities=16%  Similarity=0.161  Sum_probs=79.4

Q ss_pred             eEEec-ChhhHHHHHHHhcCCeEeeeecCCc----------cceeEEEeeecCCCceeEEEEEEecCCcccccCCc-eee
Q 025083          125 MLRVG-DLGRSIKFYEKALGMKLLRTIDSPE----------LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNA-YAQ  192 (258)
Q Consensus       125 ~l~v~-d~~~s~~FY~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g-~~h  192 (258)
                      -|..+ |.+++++||+++||.++..+....+          +....+-+..+    ...|.+...........+++ -.-
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~----g~~im~sd~~~~~~~~~~~~~s~~   80 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG----GSTIMLSDAFPDMGATEGGGTSLS   80 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC----CEEEEEecCCCccCcccCCCeeEE
Confidence            46677 9999999999999999988776554          23333444443    22333332222111222222 234


Q ss_pred             EEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          193 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       193 i~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |.+.++|+++.++++    .+.|+++..++....+ +.++..++||.|+.|-|.+..
T Consensus        81 l~~~~~d~da~f~~a----~~aGa~v~mpl~~~fw-G~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          81 LDLYVEDVDAVFERA----AAAGATVVMPLEDTFW-GDRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEEehHHHHHHHHH----HhcCCeEEecchhcCc-ccceEEEECCCCCEEEEecCc
Confidence            777778888888888    8999999988877665 568999999999999997654

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=99.09  E-value=7.1e-09  Score=86.12  Aligned_cols=189  Identities=16%  Similarity=0.200  Sum_probs=120.5

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCC--Cc--ccCCCCeeeE
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--TS--YDIGTGFGHL   96 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~--~~~~~~~~hi   96 (258)
                      .+++.+|.+.|+|.+.+..=|-..||++...+....  . ..+|..     +.+.+.+......  ..  ...|++...+
T Consensus        20 ~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk--~-v~l~rQ-----Gdinlvvn~~~~s~a~~f~~~Hgps~~a~   91 (363)
T COG3185          20 TDGFEFVEFAVPDPQEALGALLGQLGFTAVAKHRSK--A-VTLYRQ-----GDINLVVNAEPDSFAAEFLDKHGPSACAM   91 (363)
T ss_pred             CCceeEEEEecCCHHHHHHHHHHHhCcccccccccc--c-eeEEEe-----CCEEEEEcCCCcchhhHHHHhcCCchhee
Confidence            789999999999996666666678999887553211  1 233322     2234444322221  01  1356788889


Q ss_pred             EEEcCC-------------------------------CCCCcEEEEEECCC---------------------CCCCceee
Q 025083           97 AIATED-------------------------------DPDGYIFELIQRGP---------------------TPEPLCQV  124 (258)
Q Consensus        97 a~~v~d-------------------------------DP~G~~iel~~~~~---------------------~~~~i~hv  124 (258)
                      +|+|+|                               -++|..+-++...+                     ....|+|+
T Consensus        92 a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~~~siyd~~f~~~~~~~~~~~~g~~~IDHl  171 (363)
T COG3185          92 AFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYGGRSIYDVEFEPNGAQGASGGVGLTAIDHL  171 (363)
T ss_pred             EEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCCCCcccccccccccccccccccCceeechh
Confidence            999999                               44444444443320                     12488999


Q ss_pred             eEEec--ChhhHHHHHHHhcCCeEeeeecCCc--cceeEEEeeecCCCceeEEEEEEecCCcc-------cccCCceeeE
Q 025083          125 MLRVG--DLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYGVTE-------YTKGNAYAQV  193 (258)
Q Consensus       125 ~l~v~--d~~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-------~~~~~g~~hi  193 (258)
                      ++.|+  .++....||+++|||+.....+.++  +....--+..+.  ....|-|....+...       ...|.|++||
T Consensus       172 ~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~--G~vrlplN~s~~~~sqi~efl~~y~G~GIQHI  249 (363)
T COG3185         172 THNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPC--GKVRLPLNESADDKSQIGEFLREYRGEGIQHI  249 (363)
T ss_pred             hhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCC--CcEEeecccCCCchhHHHHHHHHhCCCcceEE
Confidence            98886  8999999999999999887654432  222221122122  133343433222211       2356799999


Q ss_pred             EEEECChHHHHHHHHHHHHHhCCeeecCCc
Q 025083          194 AISTDDVYKSAEVVNLVTQELGGKITRQPG  223 (258)
Q Consensus       194 ~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~  223 (258)
                      +|.++||-+.++++    ++.|+++...|.
T Consensus       250 A~~T~dI~~tv~~l----r~rG~~fl~ip~  275 (363)
T COG3185         250 AFGTDDIYATVAAL----RERGVKFLPIPE  275 (363)
T ss_pred             EecccHHHHHHHHH----HHcCCccCCCch
Confidence            99999999999999    889999886653

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.09  E-value=9.4e-10  Score=79.37  Aligned_cols=75  Identities=20%  Similarity=0.158  Sum_probs=47.4

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCC--cccCCCCeeeEEEEcCC
Q 025083           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT--SYDIGTGFGHLAIATED  102 (258)
Q Consensus        26 hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~~~~hia~~v~d  102 (258)
                      ||+|.|+|++++++||+++|||++..+....+ ....+++.... .....+.+.......  ..+...+..|++|.|+|
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   77 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPG-SPETSLVLAPPANPAAMSGLQPGGTPGLVLATDD   77 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCC-CCeeEEEEeCCCCccccccccCCCceEEEEEehH
Confidence            89999999999999999999999886643222 22333343221 113445554332221  11223567899999988

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.08  E-value=6.2e-10  Score=79.50  Aligned_cols=73  Identities=22%  Similarity=0.267  Sum_probs=47.5

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc-ccCCCCeeeEEEEcCC
Q 025083           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLAIATED  102 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hia~~v~d  102 (258)
                      ++|++|.|+|++++++||+++|||++..+...+   ...+++..++.   ..+++........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            589999999999999999999999987543222   12234443321   2455544322211 1223467899999998

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.07  E-value=1.6e-09  Score=81.72  Aligned_cols=67  Identities=18%  Similarity=0.364  Sum_probs=46.0

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~  101 (258)
                      .+++||.|.|+|++++++||+++|||++.....   .  ...|+..+..  ...+.+...       ...++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~l~~~~~--~~~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG---D--QMAFLRCNSD--HHSIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC---C--eEEEEECCCC--cceEEEccC-------CCCceEEEEEECC
Confidence            479999999999999999999999999864421   1  2345554432  223444211       1246789999998


Q ss_pred             C
Q 025083          102 D  102 (258)
Q Consensus       102 d  102 (258)
                      |
T Consensus        69 d   69 (144)
T cd07239          69 S   69 (144)
T ss_pred             C
Confidence            7

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.07  E-value=1.8e-09  Score=78.45  Aligned_cols=31  Identities=19%  Similarity=0.389  Sum_probs=28.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      .+++|+.|.|+|++++++||+++|||++...
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~   32 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAE   32 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEe
Confidence            5899999999999999999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.05  E-value=2.3e-09  Score=78.25  Aligned_cols=80  Identities=28%  Similarity=0.482  Sum_probs=54.2

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCC
Q 025083           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (258)
Q Consensus        23 ~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~d  102 (258)
                      +++||.|.|+|++++++||+++|||++....+  +    ..++..+.  .  .+.+......   ....+..|++|.+++
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~----~~~~~~~~--~--~~~l~~~~~~---~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K----GAYLEAGD--L--WLCLSVDANV---GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C----ceEEecCC--E--EEEEecCCCC---CCCCCeeeEEEEeCH
Confidence            47999999999999999999999999875432  1    12333321  2  2222211111   123467899998853


Q ss_pred             -------------------------------CCCCcEEEEEECC
Q 025083          103 -------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus       103 -------------------------------DP~G~~iel~~~~  115 (258)
                                                     ||||+.||++...
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCCCccEEEEECCCCCEEEEEeCC
Confidence                                           9999999999764

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.04  E-value=1.2e-09  Score=80.04  Aligned_cols=120  Identities=24%  Similarity=0.292  Sum_probs=70.6

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccc---eeEEEeeecCCCceeEEEEE-------Eec-CCcc--ccc
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK---CALAMLGYAEEDQTTVLELA-------YSY-GVTE--YTK  186 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~l~-------~~~-~~~~--~~~  186 (258)
                      ++.|+.|.|+|+++|++||+++||++...........   ....+...... ........       ... ....  ...
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGG-PGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCC-cccceeecccccccccccccceEEeecC
Confidence            6899999999999999999999999998765432211   11111111100 00000000       000 0000  111


Q ss_pred             C-CceeeEEEEECC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          187 G-NAYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       187 ~-~g~~hi~~~v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      + .+..|+++.+++   ....+...    ...|..+...+. ...  +..+||+||||+.||+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~~~~-~~~--~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFL----DPDGVRIELGEP-GRG--GVHVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEee----CCCCCEEEeecC-CCc--ceEEEEECCCCcEEEeeC
Confidence            1 247899999998   44444444    567887765433 222  238999999999999974

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.03  E-value=1.4e-09  Score=77.98  Aligned_cols=96  Identities=23%  Similarity=0.293  Sum_probs=63.2

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCCCC
Q 025083           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDP  104 (258)
Q Consensus        25 ~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~dDP  104 (258)
                      +||++.|+|++++++||+++||++.......+....+..++..++  ....+||..+.....                  
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~--~~~~iELi~p~~~~~------------------   60 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGD--GPVQIELIQPLDGDS------------------   60 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETT--ETEEEEEEEESSTTC------------------
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCC--CcEEEEEEEeCCCCc------------------
Confidence            699999999999999999999998765544334444444444322  113455544322110                  


Q ss_pred             CCcEEEEEECCCCCCCceeeeEEecChhhHHHHHHHhcCCeEeee
Q 025083          105 DGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRT  149 (258)
Q Consensus       105 ~G~~iel~~~~~~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~  149 (258)
                            .+.  ....++.|+++.|.|++++.+-+.+ .|+++...
T Consensus        61 ------~~~--~~~~gi~Hia~~v~D~d~~~~~l~~-~G~~~~~~   96 (109)
T PF13669_consen   61 ------PLD--RGGGGIHHIAFEVDDLDAAIARLEA-QGFRVLDE   96 (109)
T ss_dssp             ------HHH--HTSSEEEEEEEEESHHHHHHHHHHH-TTECEEEC
T ss_pred             ------ccc--cCCCCEEEEEEEeCCHHHHHHHHHH-CCCEEccc
Confidence                  000  1346788999999999999999875 79887654

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.02  E-value=2.8e-09  Score=76.55  Aligned_cols=28  Identities=32%  Similarity=0.649  Sum_probs=25.7

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeee
Q 025083           26 HAVYRVGDLDRTIKYYTECFGMELLRKR   53 (258)
Q Consensus        26 hv~l~v~dl~~s~~FY~~~lG~~~~~~~   53 (258)
                      ||.|.|+|++++++||+++||+++..+.
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~   28 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSS   28 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeecc
Confidence            8999999999999999999999987653

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.02  E-value=3.5e-09  Score=76.21  Aligned_cols=71  Identities=17%  Similarity=0.051  Sum_probs=43.6

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCC
Q 025083           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~d  102 (258)
                      +.|++|.|+|++++++||+++||+++..... +...  .+++..++   ...+.+.......  .......|++|.|+|
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~--~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~f~v~d   71 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGD--YAVFSTGG---GAVGGLMKAPEPA--AGSPPGWLVYFAVDD   71 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCc--eEEEEeCC---ccEEEEecCCCCC--CCCCCeEEEEEEeCC
Confidence            4799999999999999999999999875532 1222  23333322   1122332221111  122355788998888

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.95  E-value=3.6e-08  Score=85.33  Aligned_cols=121  Identities=19%  Similarity=0.206  Sum_probs=82.3

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCc-c-----cccCCceeeE
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-E-----YTKGNAYAQV  193 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~-----~~~~~g~~hi  193 (258)
                      ++.|+.|.|+|++++.+||++.|||+........... ....++.+    ...+.|....... +     ...+.|+.|+
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~G----~~~l~L~~~~~~~s~~~~~~~~hg~gv~~i   76 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQG----QINFVLTAPYSSDSPAADFAAKHGDGVKDV   76 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEeC----CEEEEEecCCCCCchHHHHHHhCCCceEEE
Confidence            6899999999999999999999999988762222222 22223322    3556665432221 1     1246789999


Q ss_pred             EEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          194 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       194 ~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +|.|+|++++++++    .++|++++.+|.....+.-+..-++-+.|..+.|+++.
T Consensus        77 af~V~Dv~~a~~~l----~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~  128 (353)
T TIGR01263        77 AFRVDDAAAAFEAA----VERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRG  128 (353)
T ss_pred             EEEECCHHHHHHHH----HHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCC
Confidence            99999999999999    89999998877543111223344566777777777653

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.93  E-value=7.3e-09  Score=75.37  Aligned_cols=30  Identities=20%  Similarity=0.595  Sum_probs=27.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLR   51 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~   51 (258)
                      |++.|+.|.|+|+++|++||+++||+++..
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~   30 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVM   30 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEee
Confidence            578999999999999999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.93  E-value=1.3e-08  Score=74.30  Aligned_cols=71  Identities=17%  Similarity=0.186  Sum_probs=43.2

Q ss_pred             eeEEEEEeCCHHHHHHHHHHh---cCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           24 FLHAVYRVGDLDRTIKYYTEC---FGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      +.||.|.|+|+++|++||+++   ||++...+.   .+. ...|.. ..  ....+.+.......+. ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~---~~~-~~~~~~-~~--~~~~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED---GPG-AVGYGK-GG--GGPDFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec---CCc-eeEecc-CC--CCceEEEeccccCCCC-CCCCceEEEEEC
Confidence            579999999999999999999   699886543   111 222322 21  2234444433211111 122457999999


Q ss_pred             CC
Q 025083          101 ED  102 (258)
Q Consensus       101 ~d  102 (258)
                      ++
T Consensus        73 ~~   74 (123)
T cd07262          73 PS   74 (123)
T ss_pred             CC
Confidence            86

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.91  E-value=1.9e-08  Score=73.04  Aligned_cols=28  Identities=32%  Similarity=0.693  Sum_probs=25.8

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           25 LHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        25 ~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      -|+.|.|+|++++.+||+++||++....
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~   30 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKV   30 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecc
Confidence            5999999999999999999999987654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.91  E-value=1.8e-08  Score=73.21  Aligned_cols=70  Identities=27%  Similarity=0.408  Sum_probs=43.4

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCC------cccCCCCeeeEE
Q 025083           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT------SYDIGTGFGHLA   97 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~~hia   97 (258)
                      +-||.|.|+|++++++||+++|||++..+.   ++.  .+++..++.   ..+.+.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~~--~~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE---DRR--LAFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC---CCc--eEEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            468999999999999999999999987641   222  244444332   223333221110      111234778999


Q ss_pred             EEcC
Q 025083           98 IATE  101 (258)
Q Consensus        98 ~~v~  101 (258)
                      |.++
T Consensus        73 ~~v~   76 (122)
T cd08354          73 FAIP   76 (122)
T ss_pred             EEcC
Confidence            9986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=98.90  E-value=1.5e-08  Score=71.61  Aligned_cols=71  Identities=30%  Similarity=0.381  Sum_probs=49.0

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCC
Q 025083           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (258)
Q Consensus        26 hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~d  102 (258)
                      |+.+.|+|++++.+||+++||++.......  ......++..+    ...+.+...........+.+..|++|.|+|
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~   71 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDD   71 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCC
Confidence            899999999999999999999998876432  11244555432    245666654332211234577899999998

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.88  E-value=2.1e-08  Score=73.18  Aligned_cols=29  Identities=28%  Similarity=0.522  Sum_probs=26.4

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           24 FLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      +.|+.|.|+|++++.+||+++|||++...
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~   29 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFL   29 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEee
Confidence            47999999999999999999999998654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=98.86  E-value=3.4e-08  Score=78.00  Aligned_cols=79  Identities=23%  Similarity=0.364  Sum_probs=55.5

Q ss_pred             ceeeEEEEEeC--CHHHHHHHHHHhcCCEEeeeeccCC--CCeEEEEeccCCCCceeEEEEEeecCC--C-------ccc
Q 025083           22 RRFLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPE--EKYSNAFLGFGPEQSYFVVELTYNYGV--T-------SYD   88 (258)
Q Consensus        22 ~~~~hv~l~v~--dl~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~--~-------~~~   88 (258)
                      .+++||++.|+  |++++++||+++|||+.......++  .......+..  ......++|..+...  .       ...
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~--~~g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLAS--PDGKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEEC--CCCcEEEEEecCCCCCCccHHHHHHHHh
Confidence            57999999999  9999999999999999876654332  2233344443  234566777654431  1       112


Q ss_pred             CCCCeeeEEEEcCC
Q 025083           89 IGTGFGHLAIATED  102 (258)
Q Consensus        89 ~~~~~~hia~~v~d  102 (258)
                      .|.|+.||||.|+|
T Consensus        80 ~G~Gv~HIAf~vdD   93 (191)
T cd07250          80 GGAGVQHIALATDD   93 (191)
T ss_pred             CCCceeEEEEECCC
Confidence            46799999999998

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.85  E-value=8.2e-08  Score=69.91  Aligned_cols=72  Identities=21%  Similarity=0.194  Sum_probs=43.9

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc----ccCCCCeeeEEEEcCC
Q 025083           27 AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS----YDIGTGFGHLAIATED  102 (258)
Q Consensus        27 v~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~hia~~v~d  102 (258)
                      -.|.|+|++++++||+++||+++......+++....+.+..++  .  .+.+........    .....+..+++|.|+|
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGD--G--GVMVGSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECC--E--EEEEecCCCcccccccccCCCceEEEEEEECC
Confidence            4689999999999999999999987653333333333444331  2  233332221111    1123455789999988

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.84  E-value=7e-08  Score=70.01  Aligned_cols=83  Identities=24%  Similarity=0.278  Sum_probs=54.5

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCC-C-cccCCCCeeeEEEEcCC--
Q 025083           27 AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-T-SYDIGTGFGHLAIATED--  102 (258)
Q Consensus        27 v~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~-~~~~~~~~~hia~~v~d--  102 (258)
                      +.|.|+|++++.+||+++||+++......+++....+.+..++    ..+.+...... . ....+.+..|++|.|+|  
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGD----SVLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECC----EEEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            4589999999999999999999887654344443444444332    23444332111 0 11223456799999998  


Q ss_pred             ------------------------------CCCCcEEEEEE
Q 025083          103 ------------------------------DPDGYIFELIQ  113 (258)
Q Consensus       103 ------------------------------DP~G~~iel~~  113 (258)
                                                    ||+|+.|+|.+
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence                                          99999998875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.82  E-value=3.1e-08  Score=72.27  Aligned_cols=28  Identities=25%  Similarity=0.445  Sum_probs=25.6

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           25 LHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        25 ~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      -||+|.|+|+++|++||+++||+++...
T Consensus         1 ~Hi~l~v~Dl~~s~~FY~~~lG~~~~~~   28 (125)
T cd08357           1 FHLAIPVRDLEAARAFYGDVLGCKEGRS   28 (125)
T ss_pred             CeEEEEeCCHHHHHHHHHHhcCCEEeec
Confidence            3999999999999999999999998654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.80  E-value=5e-08  Score=70.65  Aligned_cols=28  Identities=29%  Similarity=0.500  Sum_probs=25.1

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           25 LHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        25 ~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      -++.|.|+|+++|++||+++|||++...
T Consensus         3 ~~~~l~v~D~~~s~~FY~~~lG~~~~~~   30 (119)
T cd08359           3 LYPVIVTDDLAETADFYVRHFGFTVVFD   30 (119)
T ss_pred             ceeEEEECCHHHHHHHHHHhhCcEEEec
Confidence            3678999999999999999999998754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=98.79  E-value=6e-08  Score=69.64  Aligned_cols=30  Identities=23%  Similarity=0.526  Sum_probs=26.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      +++.||.|.|+|+++|++||+ +|||++..+
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~   30 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREE   30 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEee
Confidence            468999999999999999997 799998654

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=98.78  E-value=5.7e-08  Score=69.00  Aligned_cols=66  Identities=23%  Similarity=0.275  Sum_probs=39.2

Q ss_pred             EEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCC
Q 025083           29 YRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (258)
Q Consensus        29 l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~d  102 (258)
                      |.|+|++++++||+++|||++....+    .+  +.+..+.........+.....  ......+..|++|.|+|
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~d   66 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DY--VDFSLGFRFHDGVIEFLQFPD--PPGPPGGGFHLCFEVED   66 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SE--EEEEETEEEEEEEEEEEEEES--SSSSSSSEEEEEEEESH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----Ce--EEEEeccchhhhhHHHccCCc--cccCCCceeEEEEEEcC
Confidence            68999999999999999999987432    22  222222110011122222211  12234577899999987

...

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.75  E-value=1.1e-07  Score=79.67  Aligned_cols=109  Identities=21%  Similarity=0.199  Sum_probs=68.8

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .+..||.|.|+|+++|++||+++|++.. ..  ++  . . +++  +.   ...+.+....+    .....-.-+++.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fs--de--~-a-~cm--~d---tI~vMllt~~D----~~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-WD--GD--K-L-FLL--GK---TSLYLQQTKAE----KKNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-CC--CC--c-c-ccc--cC---cEEEEEecCCC----CCCcceEEEEeccC
Confidence            4567999999999999999999988874 21  11  1 1 223  11   22222221111    11234455899999


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      + .+.++.+-++..++|++...+|..+..    .--|.|||||.||++-.
T Consensus       310 S-re~VD~lv~~A~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        310 C-EHDFVRFLRRWEMLGGELGEQADGHFP----LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             C-HHHHHHHHHHHHHcCCCCCCCcccccC----cceeECCCCCEEEEEEE
Confidence            8 444555555558999977666555432    22589999999999843

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.74  E-value=1.2e-07  Score=68.12  Aligned_cols=67  Identities=21%  Similarity=0.264  Sum_probs=40.7

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCC-cccCCCCeeeEEEEcCC
Q 025083           27 AVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT-SYDIGTGFGHLAIATED  102 (258)
Q Consensus        27 v~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~~hia~~v~d  102 (258)
                      |.|.|+|+++|++||+++||+++....    ..+..  +..++   ...+.+....... ......+..|++|.|++
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~~~--~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~   69 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTFAL--FVLGS---GVKLGLWSRHTVEPASDATGGGSELAFMVDD   69 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----CceEE--EEeCC---CcEEEEeeccccCCCCCCCCCceEEEEEcCC
Confidence            679999999999999999999976531    22322  22211   1234443322211 11123466899999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.73  E-value=1.2e-07  Score=69.41  Aligned_cols=27  Identities=26%  Similarity=0.550  Sum_probs=24.0

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           25 LHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        25 ~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      ++|.|.|+|+++|++||++ |||++...
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~   28 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQ   28 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccc
Confidence            6899999999999999976 99998643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=98.70  E-value=2e-07  Score=66.51  Aligned_cols=66  Identities=27%  Similarity=0.360  Sum_probs=41.0

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCC
Q 025083           28 VYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED  102 (258)
Q Consensus        28 ~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~d  102 (258)
                      .|.|+|++++++||+++|||++.....  ..  ..+++..+    ...+.+......... ...+..|++|.++|
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~   68 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIEVED   68 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEEeCC
Confidence            589999999999999999999876532  12  23444422    234445433221111 22345688898887

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=98.68  E-value=1.8e-07  Score=68.07  Aligned_cols=28  Identities=14%  Similarity=0.444  Sum_probs=24.5

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           24 FLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      ++||+|.|+|+++|++||+. |||++...
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~   28 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEE   28 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCC
Confidence            57999999999999999975 99997643

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.66  E-value=2.7e-07  Score=66.11  Aligned_cols=77  Identities=19%  Similarity=0.336  Sum_probs=49.2

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCC---
Q 025083           26 HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED---  102 (258)
Q Consensus        26 hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~d---  102 (258)
                      +..|.|+|++++++||+++|||++...    .+ + ..++..+. .....+.+.....     .+....|++|.|+|   
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~----~~-~-~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~   70 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMD----HG-W-IATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDA   70 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEc----CC-c-eEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHH
Confidence            356899999999999999999998642    11 2 23333221 1233444432211     11234688888887   


Q ss_pred             -----------------------------CCCCcEEEEEEC
Q 025083          103 -----------------------------DPDGYIFELIQR  114 (258)
Q Consensus       103 -----------------------------DP~G~~iel~~~  114 (258)
                                                   ||+|+.|++.++
T Consensus        71 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          71 ALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence                                         999999998864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=98.61  E-value=7e-07  Score=64.71  Aligned_cols=38  Identities=24%  Similarity=0.364  Sum_probs=32.2

Q ss_pred             cccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeec
Q 025083           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRD   54 (258)
Q Consensus        17 ~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~   54 (258)
                      .+.+...+.|..|.|+|++++++||+++|||++.....
T Consensus         3 ~~~~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~   40 (127)
T COG3324           3 GAGEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFD   40 (127)
T ss_pred             ccccCCccEEEeeecCCHHHHHHHHHHhhCceeccccc
Confidence            34456678999999999999999999999999976543

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.58  E-value=2.5e-06  Score=60.19  Aligned_cols=114  Identities=27%  Similarity=0.353  Sum_probs=64.1

Q ss_pred             eeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc--cccCCceeeEEEEECC
Q 025083          122 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAISTDD  199 (258)
Q Consensus       122 ~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hi~~~v~d  199 (258)
                      .+-+|+|.|-+..++||+++|||++.....      .++.++..  .....+.|-.++....  ....-.++++.+.|++
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~--~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~   73 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQ--QKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPN   73 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-T--T--EEEEEEE--TTT-B--SSS-SEEEEEEEESS
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCC--CCceEEEEecCCccccccccCcceeeEEEEEcCC
Confidence            456899999999999999999999887653      35556642  2344455555544432  2222268999999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          200 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       200 ~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                      .. ..+.|    .+.|.++..   ...+.++.-+-..+|.|.+|.+....+.
T Consensus        74 ~~-EIe~L----Lar~~~~~~---l~kg~~gyAfe~vSPEgd~~llhaEdd~  117 (125)
T PF14506_consen   74 PK-EIEAL----LARGAQYDR---LYKGKNGYAFEAVSPEGDRFLLHAEDDI  117 (125)
T ss_dssp             HH-HHHHH----HHC-S--SE---EEE-SSSEEEEEE-TT--EEEEE--S-G
T ss_pred             HH-HHHHH----Hhcccccce---eEEcCCceEEEEECCCCCEEEEEEcCCH
Confidence            54 45555    456665432   1223334555578999999999877654

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.51  E-value=2.1e-06  Score=60.65  Aligned_cols=84  Identities=23%  Similarity=0.415  Sum_probs=51.8

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcCC--
Q 025083           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATED--  102 (258)
Q Consensus        25 ~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~d--  102 (258)
                      .+-.|+|.|-+..++||+++|||++..++.      ..+.++.......+.||-.+............++++.++|++  
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~   75 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPK   75 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHH
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHH
Confidence            467899999999999999999999988743      356666433334444444333322333444678999999987  


Q ss_pred             -----------------CCCCcEEEEEEC
Q 025083          103 -----------------DPDGYIFELIQR  114 (258)
Q Consensus       103 -----------------DP~G~~iel~~~  114 (258)
                                       ..+|+.+|++.+
T Consensus        76 EIe~LLar~~~~~~l~kg~~gyAfe~vSP  104 (125)
T PF14506_consen   76 EIEALLARGAQYDRLYKGKNGYAFEAVSP  104 (125)
T ss_dssp             HHHHHHHC-S--SEEEE-SSSEEEEEE-T
T ss_pred             HHHHHHhcccccceeEEcCCceEEEEECC
Confidence                             667777777744

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=98.48  E-value=1.7e-06  Score=62.79  Aligned_cols=27  Identities=22%  Similarity=0.363  Sum_probs=23.5

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeee
Q 025083           26 HAVYRVGDLDRTIKYYTECFGMELLRKR   53 (258)
Q Consensus        26 hv~l~v~dl~~s~~FY~~~lG~~~~~~~   53 (258)
                      ...|.|+|+++|++||++ |||++..+.
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~   31 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQ   31 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecC
Confidence            467999999999999999 999987653

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>PRK10148 hypothetical protein; Provisional

Probab=98.44  E-value=1.6e-05  Score=59.92  Aligned_cols=115  Identities=17%  Similarity=0.109  Sum_probs=71.0

Q ss_pred             eEEec-ChhhHHHHHHHhcCCeEeeeec---C-----------------CccceeEEEeeecCCCceeEEEEEEecCCcc
Q 025083          125 MLRVG-DLGRSIKFYEKALGMKLLRTID---S-----------------PELKCALAMLGYAEEDQTTVLELAYSYGVTE  183 (258)
Q Consensus       125 ~l~v~-d~~~s~~FY~~~lG~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  183 (258)
                      -|..+ |.+++++||+++||.++.....   .                 +++....+.+..++    ..+.+...... .
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g----~~lm~sD~~~~-~   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAG----SDIMMSDAIPS-G   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECC----EEEEEECCCCC-c
Confidence            45554 8999999999999998765431   0                 11222234444332    23333221111 1


Q ss_pred             cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       184 ~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      ...+ .-.++++.++|.+++ +++.+.| +.|+++..++...++ +.++..++||.|+.|.|...
T Consensus        81 ~~~~-~~~~l~l~~~d~ee~-~~~~~aL-a~gg~v~mpl~~~~w-g~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         81 KAHY-SGFTLVLDTQDVEEG-KRWFDNL-AANGKIEMAWQETFW-AHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             CCCC-CeEEEEEECCCHHHH-HHHHHHh-hCCCEEEecchhcch-hhccEEEECCCCCEEEEEec
Confidence            1111 234578888897653 3444443 589999988877765 45889999999999999765

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.39  E-value=5.6e-07  Score=73.72  Aligned_cols=128  Identities=15%  Similarity=0.169  Sum_probs=82.8

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCcc--ceeEEEeeecCCCceeEEEEEEecCCc-------ccccCC
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL--KCALAMLGYAEEDQTTVLELAYSYGVT-------EYTKGN  188 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~-------~~~~~~  188 (258)
                      ..+++||.+.|.|...+..||+..|||+.....+-..+  .+....++.+    .....+.....+.       -...|.
T Consensus        15 ~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g----~~vFv~~s~~~p~~~~~G~~l~~Hgd   90 (381)
T KOG0638|consen   15 FLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQG----KIVFVFNSAYNPDNSEYGDHLVKHGD   90 (381)
T ss_pred             eeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcC----CEEEEEecCCCCCchhhhhhhhhccc
Confidence            36899999999999999999999999998764321111  1111112211    1111111111111       023456


Q ss_pred             ceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCC--eeEEEEECCCCCEEEEEcchhhhH
Q 025083          189 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLN--TKITSFVDPDGWKTVLVDNEDFLK  253 (258)
Q Consensus       189 g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~~  253 (258)
                      |+--+||+|+|.+++.+.+    .++|+++..+|.+.....  -+++.++.+......+++.....+
T Consensus        91 gvkdvafeVeD~da~~~~~----va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g  153 (381)
T KOG0638|consen   91 GVKDVAFEVEDADAIFQEA----VANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKG  153 (381)
T ss_pred             chhceEEEecchHHHHHHH----HHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccc
Confidence            7878999999999999999    899999999987754432  467778877666666666554433

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.38  E-value=3.6e-06  Score=61.19  Aligned_cols=33  Identities=27%  Similarity=0.569  Sum_probs=30.2

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeec
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRD   54 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~   54 (258)
                      ++++||+|.|+|+++|++||+++||++++....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~   33 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTV   33 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecc
Confidence            578999999999999999999999999987654

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.37  E-value=5e-06  Score=60.01  Aligned_cols=26  Identities=23%  Similarity=0.379  Sum_probs=24.0

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           27 AVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        27 v~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      |.|.|+|++++.+||+++|||++..+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~   27 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSAD   27 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceeccc
Confidence            78999999999999999999998755

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.25  E-value=6.8e-06  Score=59.07  Aligned_cols=25  Identities=20%  Similarity=0.441  Sum_probs=21.9

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           27 AVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        27 v~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      ..|.|+|+++|++||++ |||++...
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~   29 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWE   29 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEec
Confidence            45789999999999987 99998765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.15  E-value=9e-05  Score=64.51  Aligned_cols=122  Identities=16%  Similarity=0.156  Sum_probs=82.5

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCcc--ceeEEEeeecCCCceeEEEEEEecCC-----------------
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL--KCALAMLGYAEEDQTTVLELAYSYGV-----------------  181 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~-----------------  181 (258)
                      ++||.+.|.|..++..||+..|||+.........+  ......++.+    ...+.+.....+                 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g----~i~fv~~~~~~~~~~~~~~~~~~~~~~~~   76 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSG----DLVFLFTAPYSPKIGAGDDDPASTAPHPS   76 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeC----CEEEEEeCCCCCccccccccccccccccc
Confidence            58999999999999999999999998775442111  1223334422    233333322111                 


Q ss_pred             --cc------cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCC----CCeeEEEEECCCCCEEEEEcch
Q 025083          182 --TE------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPG----LNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       182 --~~------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~----~~~~~~~~~DPdG~~iel~~~~  249 (258)
                        ..      ...|.|+.-++|.|+|++++++++    .++|.+...+|.....    +.-.+.-++-++|..+.|+++.
T Consensus        77 ~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A----~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~  152 (398)
T PLN02875         77 FSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTS----VAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYK  152 (398)
T ss_pred             cCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHH----HHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccC
Confidence              00      124568888999999999999999    8999998887754322    1124555888999999999865


Q ss_pred             h
Q 025083          250 D  250 (258)
Q Consensus       250 ~  250 (258)
                      .
T Consensus       153 ~  153 (398)
T PLN02875        153 G  153 (398)
T ss_pred             C
Confidence            3

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.10  E-value=4.4e-05  Score=59.39  Aligned_cols=115  Identities=26%  Similarity=0.335  Sum_probs=63.5

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCC--C---c-------ccCCC
Q 025083           24 FLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--T---S-------YDIGT   91 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~---~-------~~~~~   91 (258)
                      |+|+.+.|+||+++.++|++.||+++.....-+..+.....+.+++   . .|||....+.  .   .       ...+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~---~-YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGD---G-YLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SS---S-EEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCC---c-eEEEEEeCCcccccccccceechhhcCCC
Confidence            6899999999999999998899999887654444233344444432   2 5788764221  1   0       01357


Q ss_pred             CeeeEEEEcCC-------------------CCCCcEE-------------------EEEE-CCC---------CCCCcee
Q 025083           92 GFGHLAIATED-------------------DPDGYIF-------------------ELIQ-RGP---------TPEPLCQ  123 (258)
Q Consensus        92 ~~~hia~~v~d-------------------DP~G~~i-------------------el~~-~~~---------~~~~i~h  123 (258)
                      |+..+|+.++|                   +|+|..+                   .+++ ..+         ...+|.+
T Consensus        77 g~~~~~l~t~d~~~~~~~l~~~G~~~~~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~~~~~~~~h~ng~~~i~~  156 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARLRAAGLDAGSRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWETPHPEWARHPNGALGITR  156 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHHHTTT-EEEEEEEEEE-EEEEEEEEEE-SS---SS---EEEEESS-CCHHTTT--TTEEEEE
T ss_pred             CeEEEEEecCCHHHHHHHHHhcCCCCCCcCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCCCCcccccCCCccceEEE
Confidence            88999999988                   2333332                   2221 111         1247889


Q ss_pred             eeEEecChhhHHHHHHHhc
Q 025083          124 VMLRVGDLGRSIKFYEKAL  142 (258)
Q Consensus       124 v~l~v~d~~~s~~FY~~~l  142 (258)
                      |.+.++|.+++.++|.++|
T Consensus       157 v~i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  157 VVIAVPDPDAAAARYARLL  175 (175)
T ss_dssp             EEEEETTHHHHHHHHHHH-
T ss_pred             EEEEeCCHHHHHHHHHhhC
Confidence            9999999999999999875

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=97.99  E-value=2.4e-05  Score=54.65  Aligned_cols=32  Identities=31%  Similarity=0.425  Sum_probs=27.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKR   53 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~   53 (258)
                      +-+=|+++-|+||+++++||.++||++.-+.+
T Consensus         3 ~~~FHLA~pV~Dl~~tr~FYgevlG~~~GRst   34 (138)
T COG3565           3 PVPFHLAIPVNDLDETRRFYGEVLGCKEGRST   34 (138)
T ss_pred             ccceEEeeeccccHHHHhhhhhhccccccccc
Confidence            44679999999999999999999999876553

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.92  E-value=0.00021  Score=53.02  Aligned_cols=117  Identities=17%  Similarity=0.166  Sum_probs=74.8

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc----cccCCceeeEE
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE----YTKGNAYAQVA  194 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~g~~hi~  194 (258)
                      .++.+|.+.+++.++...++ +.|||+...+....    .+..++.+    ...+.|...+....    ...|.++.-++
T Consensus         8 ~G~dFvEFa~~~~~~l~~~~-~~lGF~~~a~hrsk----~v~l~rQG----~I~~vln~ep~s~a~~~~~~HG~sv~aia   78 (139)
T PF14696_consen    8 DGFDFVEFAVPDAQALAQLF-TALGFQPVARHRSK----DVTLYRQG----DINFVLNSEPDSFAAEFAAQHGPSVCAIA   78 (139)
T ss_dssp             EEEEEEEEE-SSTTSCHHHH-CCCCEEEECCECCC----SEEEEEET----TEEEEEEEESTSCHHHHHHHHSSEEEEEE
T ss_pred             CCeEEEEEecCCHHHHHHHH-HHhCcceEEecCCc----ceEEEEeC----CEEEEEeCCCcchHHHHHHhcCCEEEEEE
Confidence            57889999999988888877 56999988765432    23444432    33343433322111    23477899999


Q ss_pred             EEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          195 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       195 ~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      |.|+|..+++++.    .+.|.+...+|..  .+.-.+--|+.+.|.++.|+++.+
T Consensus        79 frV~Da~~A~~rA----~~~GA~~~~~~~~--~~e~~~paI~g~G~sl~yfVdr~~  128 (139)
T PF14696_consen   79 FRVDDAAAAYERA----VALGAEPVQEPTG--PGELNIPAIRGIGGSLHYFVDRYG  128 (139)
T ss_dssp             EEES-HHHHHHHH----HHTT--EEEEEEE--TT-BEEEEEE-CCC-EEEEEE--S
T ss_pred             EEeCCHHHHHHHH----HHcCCcCcccCCC--CCcEeeeeEEccCCCEEEEEecCC
Confidence            9999999999999    8999987766522  222356679999999999998753

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.89  E-value=6.5e-05  Score=58.43  Aligned_cols=89  Identities=22%  Similarity=0.288  Sum_probs=49.5

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCccc------------ccCC
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY------------TKGN  188 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~------------~~~~  188 (258)
                      |+|+.+.|+|++++.++|++.|||++......+..+-.-.++..++   . .|||.......+.            ..+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~---~-YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGD---G-YLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SS---S-EEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCC---c-eEEEEEeCCcccccccccceechhhcCCC
Confidence            6899999999999999998889999887655443222222222222   3 7887764222111            1356


Q ss_pred             ceeeEEEEECChHHHHHHHHHHHHHhCCe
Q 025083          189 AYAQVAISTDDVYKSAEVVNLVTQELGGK  217 (258)
Q Consensus       189 g~~hi~~~v~d~~~~~~~l~~~~~~~G~~  217 (258)
                      |+.++++.++|+++..+++    ++.|+.
T Consensus        77 g~~~~~l~t~d~~~~~~~l----~~~G~~  101 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARL----RAAGLD  101 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHH----HTTT-E
T ss_pred             CeEEEEEecCCHHHHHHHH----HhcCCC
Confidence            8999999999999999999    788975

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=97.53  E-value=0.002  Score=47.18  Aligned_cols=26  Identities=19%  Similarity=0.494  Sum_probs=22.6

Q ss_pred             EEEe-CCHHHHHHHHHHhcCCEEeeee
Q 025083           28 VYRV-GDLDRTIKYYTECFGMELLRKR   53 (258)
Q Consensus        28 ~l~v-~dl~~s~~FY~~~lG~~~~~~~   53 (258)
                      -|.+ .|.+++++||+++||.++....
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~   30 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLT   30 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEE
Confidence            4667 8999999999999999988654

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=97.47  E-value=0.00056  Score=57.89  Aligned_cols=27  Identities=37%  Similarity=0.699  Sum_probs=24.0

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEE
Q 025083           23 RFLHAVYRVGDLDRTIKYYTECFGMEL   49 (258)
Q Consensus        23 ~~~hv~l~v~dl~~s~~FY~~~lG~~~   49 (258)
                      +.-||.|.|+|+++|++||+++|++..
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~  273 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC  273 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC
Confidence            445999999999999999999988864

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=97.43  E-value=0.0013  Score=46.91  Aligned_cols=31  Identities=19%  Similarity=0.409  Sum_probs=25.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKR   53 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~   53 (258)
                      ++.-.|.|-|+||++|++||+. ||+++-...
T Consensus         2 ~~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~   32 (133)
T COG3607           2 TQMIFVNLPVKDLEASKAFYTA-LGFKFNPQF   32 (133)
T ss_pred             ceEEEEecchhhHHHHHHHHHH-hCcccCCCc
Confidence            3456789999999999999975 999987654

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.42  E-value=0.00047  Score=57.93  Aligned_cols=79  Identities=23%  Similarity=0.296  Sum_probs=52.9

Q ss_pred             cceeeEEEEEeC--CHHHHHHHHHHhcCCEEeeeeccCCC---CeEEEEeccCCCCceeEEEEEeecCCCc-------cc
Q 025083           21 KRRFLHAVYRVG--DLDRTIKYYTECFGMELLRKRDVPEE---KYSNAFLGFGPEQSYFVVELTYNYGVTS-------YD   88 (258)
Q Consensus        21 ~~~~~hv~l~v~--dl~~s~~FY~~~lG~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~l~~~~~~~~-------~~   88 (258)
                      +..|+|++..|+  .++.+..||+++|||+.....+.++.   -++-++.+   ..+.+.|.|..+.+..+       ..
T Consensus       165 ~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~S---p~G~vrlplN~s~~~~sqi~efl~~y  241 (363)
T COG3185         165 LTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVS---PCGKVRLPLNESADDKSQIGEFLREY  241 (363)
T ss_pred             ceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEec---CCCcEEeecccCCCchhHHHHHHHHh
Confidence            358999998887  99999999999999998876554432   12223222   23445555543332221       13


Q ss_pred             CCCCeeeEEEEcCC
Q 025083           89 IGTGFGHLAIATED  102 (258)
Q Consensus        89 ~~~~~~hia~~v~d  102 (258)
                      .|.|+.||||..+|
T Consensus       242 ~G~GIQHIA~~T~d  255 (363)
T COG3185         242 RGEGIQHIAFGTDD  255 (363)
T ss_pred             CCCcceEEEecccH
Confidence            47899999999998

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.21  E-value=0.021  Score=41.14  Aligned_cols=99  Identities=21%  Similarity=0.202  Sum_probs=53.5

Q ss_pred             cChhhHHHHHHHhcCCeEeee-ecCCc------cceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChH
Q 025083          129 GDLGRSIKFYEKALGMKLLRT-IDSPE------LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  201 (258)
Q Consensus       129 ~d~~~s~~FY~~~lG~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~  201 (258)
                      .+.++|.+||+++||-..... ...++      +..-.+.+..+    ...+......  .....+++ ..+++.++|. 
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~----g~~lm~~D~~--~~~~~~~~-~sl~i~~~~~-   82 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIG----GQKLMASDGG--PDFPFGNN-ISLCIECDDE-   82 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEET----TEEEEEEEES--TS----TT-EEEEEEESSH-
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEEC----CeEEEEECCC--CCCCCCCc-EEEEEEcCCH-
Confidence            689999999999999533322 22111      12222333332    2223322222  12233344 4488999994 


Q ss_pred             HHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEE
Q 025083          202 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  246 (258)
Q Consensus       202 ~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  246 (258)
                      +..+++.++|.+.| +        +. . ++..++|..|..|.|+
T Consensus        83 ee~~~~f~~Ls~gG-~--------~~-~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   83 EEIDRIFDKLSEGG-Q--------WF-S-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHHTTT-E--------TC-C-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHHcCC-C--------cc-c-eeEEEEeCCCCEEEeC
Confidence            55667766666544 3        12 2 7889999999999885

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=96.47  E-value=0.012  Score=40.87  Aligned_cols=94  Identities=17%  Similarity=0.156  Sum_probs=39.7

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC-C
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD-D  199 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~-d  199 (258)
                      +..+.|+|+| +++..||.++||-...         ..+.|....+    ..|.       .+....-++..+-|.|+ |
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~~---------~~l~f~ea~G----~DL~-------~~~~~twDLe~Lkf~V~~~   64 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQLP---------FFLTFQEAQG----PDLT-------IENNETWDLEMLKFQVPKD   64 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHHT---------TTEEEEE-------CCGS-------S-TTSBSSEEEEEEEES-S
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCCC---------ceEEEeeccC----Cccc-------cCCCcEEeeEEEEEEecCc
Confidence            5678999999 8899999998872211         1122221100    0000       00111235667889998 5


Q ss_pred             hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEE
Q 025083          200 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  245 (258)
Q Consensus       200 ~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  245 (258)
                      .+  +..|+.++.+  ..+..      +...+++.+.||+|..|.|
T Consensus        65 ~D--l~~L~~~le~--~~~fi------dKk~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   65 FD--LAALKSHLEE--QEFFI------DKKEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             ----HHHHHHHTTT--S-EE--------TT-SEEEEE-TTS-EEEE
T ss_pred             cc--HHHHHHHhcc--cceEe------cCCceEEEEECCcceEEEe
Confidence            33  4445433354  33332      2345889999999988876

>PF15067 FAM124: FAM124 family

Probab=96.13  E-value=0.094  Score=41.93  Aligned_cols=106  Identities=15%  Similarity=0.160  Sum_probs=59.2

Q ss_pred             CCceeeeEEec--ChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc-cccCCceeeEEE
Q 025083          119 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAI  195 (258)
Q Consensus       119 ~~i~hv~l~v~--d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~  195 (258)
                      .-+-.++|.|+  |.+.+++||+-+|+=+...+..    ++- .|.-+...  ...+.|.-...+.. .+....-.-+.|
T Consensus       127 ~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~----~FC-~F~lys~~--~~~iQlsLK~lp~~~~p~p~esavLqF  199 (236)
T PF15067_consen  127 KEILRFTLYCSFDNYEDMVRFYELILQREPTQQKE----DFC-FFTLYSQP--GLDIQLSLKQLPPGMSPEPTESAVLQF  199 (236)
T ss_pred             ccEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC----CcE-EEEEecCC--CeEEEEEeccCCCCCCcccccceEEEE
Confidence            35678899999  9999999999999977654432    111 22112222  34444433221111 111112334889


Q ss_pred             EECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEE
Q 025083          196 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  245 (258)
Q Consensus       196 ~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  245 (258)
                      .|.|+.+++.-|       .-++ .     +-+.++ --..|||||.|-|
T Consensus       200 ~V~~igqLvpLL-------Pnpc-~-----PIS~~r-WqT~D~DGNkILL  235 (236)
T PF15067_consen  200 RVEDIGQLVPLL-------PNPC-S-----PISETR-WQTEDYDGNKILL  235 (236)
T ss_pred             EecchhhhcccC-------CCCc-c-----cccCCc-ceeeCCCCCEecc
Confidence            999987666444       1111 1     111112 3489999999854

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.10  E-value=0.17  Score=37.41  Aligned_cols=30  Identities=20%  Similarity=0.429  Sum_probs=25.1

Q ss_pred             EEEeC-CHHHHHHHHHHhcCCEEeeeeccCC
Q 025083           28 VYRVG-DLDRTIKYYTECFGMELLRKRDVPE   57 (258)
Q Consensus        28 ~l~v~-dl~~s~~FY~~~lG~~~~~~~~~~~   57 (258)
                      -|.+. |-+++++||+++||.++..+...++
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d   35 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGD   35 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCc
Confidence            46778 9999999999999999887765544

>PF15067 FAM124: FAM124 family

Probab=95.43  E-value=0.29  Score=39.17  Aligned_cols=30  Identities=10%  Similarity=0.260  Sum_probs=25.6

Q ss_pred             eeeEEEEEeC--CHHHHHHHHHHhcCCEEeee
Q 025083           23 RFLHAVYRVG--DLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        23 ~~~hv~l~v~--dl~~s~~FY~~~lG~~~~~~   52 (258)
                      .+--+.|+|+  |.+.+++||+-+|+-+....
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~  159 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQ  159 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCccee
Confidence            5566889999  99999999999999877554

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=95.07  E-value=0.14  Score=38.01  Aligned_cols=73  Identities=14%  Similarity=0.193  Sum_probs=46.6

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc----ccCCCCeeeE
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS----YDIGTGFGHL   96 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~hi   96 (258)
                      +.++.||.+.+++.++...+++ .|||+.+.+...  .. ...| .    ++.+.+.|........    ...|+++.-+
T Consensus         7 ~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrs--k~-v~l~-r----QG~I~~vln~ep~s~a~~~~~~HG~sv~ai   77 (139)
T PF14696_consen    7 LDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRS--KD-VTLY-R----QGDINFVLNSEPDSFAAEFAAQHGPSVCAI   77 (139)
T ss_dssp             EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECC--CS-EEEE-E----ETTEEEEEEEESTSCHHHHHHHHSSEEEEE
T ss_pred             CCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCC--cc-eEEE-E----eCCEEEEEeCCCcchHHHHHHhcCCEEEEE
Confidence            5799999999999877777775 699998866421  11 2333 2    2335555554332211    1347899999


Q ss_pred             EEEcCC
Q 025083           97 AIATED  102 (258)
Q Consensus        97 a~~v~d  102 (258)
                      +|+|+|
T Consensus        78 afrV~D   83 (139)
T PF14696_consen   78 AFRVDD   83 (139)
T ss_dssp             EEEES-
T ss_pred             EEEeCC
Confidence            999999

>PRK10148 hypothetical protein; Provisional

Probab=94.67  E-value=1.4  Score=33.14  Aligned_cols=25  Identities=32%  Similarity=0.551  Sum_probs=20.4

Q ss_pred             EEEeC-CHHHHHHHHHHhcCCEEeee
Q 025083           28 VYRVG-DLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        28 ~l~v~-dl~~s~~FY~~~lG~~~~~~   52 (258)
                      -|... |.+++++||+++||.++...
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~   31 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYK   31 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEE
Confidence            45554 89999999999999887644

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=92.96  E-value=1.4  Score=34.27  Aligned_cols=77  Identities=18%  Similarity=0.250  Sum_probs=37.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCC-EEeeeeccCCCCeEEEEeccCC-----CCceeEEEEEeecCCCcccCCCCeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGM-ELLRKRDVPEEKYSNAFLGFGP-----EQSYFVVELTYNYGVTSYDIGTGFGH   95 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~l~~~~~~~~~~~~~~~~h   95 (258)
                      ..++||+++|++.+.+.++-+..+.. ++....... | ..++.+.+..     ...--.+||.++.+ ..|+ ..|+.|
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~IN-G-RPI~l~~L~qPL~~~~~~I~~vELP~P~~-K~Yp-~eGWEH  108 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSENMIN-G-RPICLFKLNQPLQFGGWSIDCVELPYPKD-KRYP-QEGWEH  108 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEET-T-EEEEEEEEEEEEEETTEEEEEEEEE---S-S--S-S-EEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeC-C-eeEEEEEcCCchhcCCeeEEEEEeCCCCC-CCCC-CCCceE
Confidence            46899999999999999999998866 444432221 2 1222222110     01111355555433 2222 247777


Q ss_pred             EEEEcCC
Q 025083           96 LAIATED  102 (258)
Q Consensus        96 ia~~v~d  102 (258)
                      |-|.+|.
T Consensus       109 IE~Vip~  115 (185)
T PF06185_consen  109 IEFVIPS  115 (185)
T ss_dssp             EEEE--S
T ss_pred             EEEEecC
Confidence            7777765

; PDB: 1K4N_A.

>PRK11700 hypothetical protein; Provisional

Probab=92.94  E-value=1.6  Score=33.96  Aligned_cols=77  Identities=17%  Similarity=0.217  Sum_probs=43.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCC-EEeeeeccCCCCeEEEEeccCCC-----CceeEEEEEeecCCCcccCCCCeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGM-ELLRKRDVPEEKYSNAFLGFGPE-----QSYFVVELTYNYGVTSYDIGTGFGH   95 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~l~~~~~~~~~~~~~~~~h   95 (258)
                      ..++||+++|.+.+.+.++.+..+-. ++...... .| ..++.+.+..+     ..--.+||.++.. ..|+ ..|+.|
T Consensus        38 ~~~DHialR~n~~~tAe~w~~~l~~~G~llSen~I-NG-RPI~l~~L~qPl~~~~w~I~cvELP~P~~-k~Yp-~eGWEH  113 (187)
T PRK11700         38 LEADHIALRCNQNETAERWRQGFLQCGELLSENII-NG-RPICLFELDQPLQVGHWSIDCVELPYPGE-KRYP-HEGWEH  113 (187)
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcccc-CC-eeEEEEEcCCCceeCCcEEEEEEeCCCCC-CCCC-CCCceE
Confidence            46899999999999999999887754 33332221 12 12333232111     1112455554432 2233 247778


Q ss_pred             EEEEcCC
Q 025083           96 LAIATED  102 (258)
Q Consensus        96 ia~~v~d  102 (258)
                      |-+.+|.
T Consensus       114 IElVlp~  120 (187)
T PRK11700        114 IELVLPG  120 (187)
T ss_pred             EEEEecC
Confidence            8777775

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.74  E-value=2.9  Score=31.21  Aligned_cols=24  Identities=13%  Similarity=0.162  Sum_probs=21.6

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCC
Q 025083           24 FLHAVYRVGDLDRTIKYYTECFGM   47 (258)
Q Consensus        24 ~~hv~l~v~dl~~s~~FY~~~lG~   47 (258)
                      ++||+|+|.+.+.+.++.+..+..
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~   25 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQC   25 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHh
Confidence            689999999999999999888754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=87.37  E-value=0.32  Score=33.83  Aligned_cols=23  Identities=26%  Similarity=0.525  Sum_probs=10.6

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcC
Q 025083           23 RFLHAVYRVGDLDRTIKYYTECFG   46 (258)
Q Consensus        23 ~~~hv~l~v~dl~~s~~FY~~~lG   46 (258)
                      .+.-|.|+|+| +++..||+++||
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~   27 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFG   27 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccc
Confidence            46789999999 889999999886

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	258
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		2e-27
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		2e-25
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		8e-20
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		6e-22
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		1e-09
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		4e-09
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		4e-09
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		1e-08

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 4/130 (3%)
Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
           L   MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62
Query: 181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
           V +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDG 118
Query: 241 WKTVLVDNED 250
           +K  L++ +D
Sbjct: 119 YKIELIEEKD 128

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 71/120 (59%), Gaps = 28/120 (23%)
Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           RR LH + RVGDLDR+IK+YTE  GM++LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 66
Query: 82  YGVTSYDIGTGFGHLAIATED----------------------------DPDGYIFELIQ 113
           YGVTSY     +GH+AI  ED                            DPDGY  EL+ 
Sbjct: 67  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLN 126

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 13/140 (9%)
Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
           +   M+RVGDL RSIKFY + LGMK+LR  D PE K  L  LGY  E  +TVLEL Y+YG
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68
Query: 181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTK--ITSFVDP 238
           VT Y    AY  +AI  +DV           +EL   + +   PI   +    +   VDP
Sbjct: 69  VTSYKHDEAYGHIAIGVEDV-----------KELVADMRKHDVPIDYEDESGFMAFVVDP 117
Query: 239 DGWKTVLVDNEDFLKELQSE 258
           DG+   L++ +  +++ +++
Sbjct: 118 DGYYIELLNEKTMMEKAEAD 137

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 123/276 (44%), Gaps = 64/276 (23%)
Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-----------KYSNAFLGFGPE 70
           RR LH V++VG+  +T ++Y +  GM++LR  +  E            K+S   +GFGPE
Sbjct: 26  RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 85
Query: 71  QSYFVVELTYNYGVTSYDIGTGFGHLAIATE-----------------------DDPDGY 107
             +FV ELTYNYGV  Y +G  F  + +A+                        + P GY
Sbjct: 86  DDHFVAELTYNYGVGDYKLGNDFMGITLASSQAVSNARKLEWPLTEVAEGVFETEAPGGY 145
Query: 108 IFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAE 166
            F L  R  P  +P+ +V L V DL +S+ ++   LGMK+    +  +     A+LGYA 
Sbjct: 146 KFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQ----RALLGYA- 200
Query: 167 EDQTTVLELAYSYGVTEYTKGNAYAQVAIST--------DDVYKSAE---VVNLVTQELG 215
            D    LEL    G  ++    A+ ++A S         +D+ K      +  LV+ +  
Sbjct: 201 -DNQCKLELQGVKGGVDHAA--AFGRIAFSCPQKELPDLEDLMKRENQKILTPLVSLDTP 257
Query: 216 GKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF 251
           GK T Q          +    DPDG +   V +E F
Sbjct: 258 GKATVQ----------VVILADPDGHEICFVGDEAF 283

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED------------ 168
           L Q MLR+ D  +S+ FY + LG+ LL+ +D P +K +L  L Y +++            
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91
Query: 169 ---QTTVLELAYSYGVTE-----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 216
              +   LEL +++G  +     Y  GN+    +  + I+  DVY + +      +ELG 
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGV 147
Query: 217 KITRQP--GPIPGLNTKITSFV-DPDG-WKTVLVDNE 249
           K  ++P  G + GL     +F+ DPDG W  +L  N+
Sbjct: 148 KFVKKPDDGKMKGL-----AFIQDPDGYWIEILNPNK 179

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED------------ 168
           L Q MLRV D  +S+ FY + LGM L++  D P +K +L  L Y +++            
Sbjct: 35  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 94
Query: 169 ---QTTVLELAYSYGVTE-----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 216
              +   LEL +++G  +     Y  GN+    +  + I+  DVY + +      +ELG 
Sbjct: 95  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGV 150
Query: 217 KITRQP--GPIPGLNTKITSFV-DPDG-WKTVLVDNE 249
           K  ++P  G + GL     +F+ DPDG W  +L  N+
Sbjct: 151 KFVKKPDDGKMKGL-----AFIQDPDGYWIEILNPNK 182

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED------------ 168
           L Q MLRV D  +S+ FY + LGM L++  D P +K +L  L Y +++            
Sbjct: 31  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 90
Query: 169 ---QTTVLELAYSYGVTE-----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 216
              +   LEL +++G  +     Y  GN+    +  + I+  DVY + +      +ELG 
Sbjct: 91  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGV 146
Query: 217 KITRQP--GPIPGLNTKITSFV-DPDG-WKTVLVDNE 249
           K  ++P  G + GL     +F+ DPDG W  +L  N+
Sbjct: 147 KFVKKPDDGKMKGL-----AFIQDPDGYWIEILNPNK 178

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED------------ 168
           L + MLRV D  +S+ FY + LGM L++  D P +K +L  L Y +++            
Sbjct: 31  LQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 90
Query: 169 ---QTTVLELAYSYGVTE-----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 216
              +   LEL +++G  +     Y  GN+    +  + I+  DVY + +      +ELG 
Sbjct: 91  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGV 146
Query: 217 KITRQP--GPIPGLNTKITSFV-DPDG-WKTVLVDNE 249
           K  ++P  G + GL     +F+ DPDG W  +L  N+
Sbjct: 147 KFVKKPDDGKMKGL-----AFIQDPDGYWIQILNPNK 178

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	258
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	6e-44
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	9e-35
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	7e-38
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	3e-36
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	1e-25
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	2e-25
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	6e-23
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	3e-18
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	3e-20
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	4e-17
2p25_A	126	Glyoxalase family protein; structural genomics, MC	3e-18
2p25_A	126	Glyoxalase family protein; structural genomics, MC	9e-15
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	5e-18
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	6e-15
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	2e-17
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	9e-07
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	9e-04
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	3e-16
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	2e-13
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	6e-16
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	2e-13
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	9e-15
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	2e-08
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	3e-13
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	1e-05
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	7e-13
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	1e-10
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-12
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-11
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	1e-10
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	8e-11
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-09
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	3e-10
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	2e-06
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	1e-09
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	4e-08
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	3e-09
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	3e-05
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	2e-08
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-08
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	3e-08
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	4e-04
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-08
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-05
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	5e-08
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	9e-08
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	4e-06
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-07
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	4e-04
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	7e-07
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	1e-06
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	3e-06
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	1e-06
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-06
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	3e-04
3ghj_A	141	Putative integron gene cassette protein; integron	2e-06
3ghj_A	141	Putative integron gene cassette protein; integron	2e-05
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	2e-06
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	4e-04
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-06
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-06
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-06
1nki_A	135	Probable fosfomycin resistance protein; potassium	4e-06
1nki_A	135	Probable fosfomycin resistance protein; potassium	3e-04
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	4e-06
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	1e-05
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	4e-06
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	8e-06
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	2e-05
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-05
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-04
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	2e-05
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	2e-05
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	3e-05
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	3e-05
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	9e-05
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	4e-05
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	5e-05
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	9e-05
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	9e-05
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	7e-04
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	1e-04
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	1e-04
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	2e-04
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	2e-04
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	3e-04
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	4e-04
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	9e-04

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  144 bits (366), Expect = 6e-44
 Identities = 62/138 (44%), Positives = 74/138 (53%), Gaps = 28/138 (20%)

Query: 21  KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
            RR LH + RVGDLDR+IK+YTE  GM++LRK DVPE+KY+  FLG+GPE S  V+ELTY
Sbjct: 6   SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 81  NYGVTSYDIGTGFGHLAIATED----------------------------DPDGYIFELI 112
           NYGVTSY     +GH+AI  ED                            DPDGY  EL+
Sbjct: 66  NYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELL 125

Query: 113 QRGPTPEPLCQVMLRVGD 130
                 E     M   G 
Sbjct: 126 NEKTMMEKAEADMKEQGT 143

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  120 bits (304), Expect = 9e-35
 Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 9/136 (6%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 182
             M+RVGDL RSIKFY + LGMK+LR  D PE K  L  LGY  E  +TVLEL Y+YGVT
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVT 70

Query: 183 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWK 242
            Y    AY  +AI  +DV +    +    ++    I  +          +   VDPDG+ 
Sbjct: 71  SYKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDES-----GFMAFVVDPDGYY 121

Query: 243 TVLVDNEDFLKELQSE 258
             L++ +  +++ +++
Sbjct: 122 IELLNEKTMMEKAEAD 137

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  128 bits (324), Expect = 7e-38
 Identities = 51/132 (38%), Positives = 70/132 (53%), Gaps = 33/132 (25%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R LH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATED---------------------------------DPDGYIF 109
           GV  Y++GT +GH+A++ ++                                 DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 110 ELIQRGPTPEPL 121
           ELI+       L
Sbjct: 122 ELIEEKDAGRGL 133

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  124 bits (314), Expect = 3e-36
 Identities = 62/134 (46%), Positives = 87/134 (64%), Gaps = 6/134 (4%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 182
             MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++GV 
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 183 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDGW 241
           +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I  FV DPDG+
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIA-FVEDPDGY 119

Query: 242 KTVLVDNEDFLKEL 255
           K  L++ +D  + L
Sbjct: 120 KIELIEEKDAGRGL 133

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 98.6 bits (245), Expect = 1e-25
 Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 40/182 (21%)

Query: 97  AIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK 156
           A +   DPD    + +        L Q MLR+ D  +S+ FY + LG+ LL+ +D P +K
Sbjct: 16  AFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMK 67

Query: 157 CALAMLGYAEED---------------QTTVLELAYSYGVTE-----YTKGNA----YAQ 192
            +L  L Y +++               +   LEL +++G  +     Y  GN+    +  
Sbjct: 68  FSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGH 127

Query: 193 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDGWKTVLVDNEDF 251
           + I+  DVY + +      +ELG K  ++P        K  +F+ DPDG+   +++    
Sbjct: 128 IGIAVPDVYSACKRF----EELGVKFVKKPDDGK---MKGLAFIQDPDGYWIEILNPNKI 180

Query: 252 LK 253
             
Sbjct: 181 AT 182

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 98.2 bits (244), Expect = 2e-25
 Identities = 41/184 (22%), Positives = 62/184 (33%), Gaps = 63/184 (34%)

Query: 1   MAEASPAAA---NAELLEW-----PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRK 52
           MAE  PA++   +           P          + R+ D  +++ +YT   G+ LL+K
Sbjct: 1   MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQK 60

Query: 53  RDVPEEKYSNAFLGFGPEQSY---------------FVVELTYNYGV-----TSYDIG-- 90
            D P  K+S  FL +  +                    +ELT+N+G       SY  G  
Sbjct: 61  LDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNS 120

Query: 91  --TGFGHLAIATED-------------------------------DPDGYIFELIQRGPT 117
              GFGH+ IA  D                               DPDGY  E++     
Sbjct: 121 DPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKI 180

Query: 118 PEPL 121
              +
Sbjct: 181 ATII 184

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 90.7 bits (225), Expect = 6e-23
 Identities = 21/136 (15%), Positives = 40/136 (29%), Gaps = 37/136 (27%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           +  H    V  +   + +Y     ++LL   D+P +    AFL  G  +   +  L+   
Sbjct: 8   KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEES 67

Query: 83  GVTSY--DIGTGFGHLAIATED-----------------------------------DPD 105
            +  +    G G  H+AI  +                                       
Sbjct: 68  PIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSAR 127

Query: 106 GYIFELIQRGPTPEPL 121
           G ++E  ++    E L
Sbjct: 128 GVLYEFCEKKEQAENL 143

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 78.3 bits (193), Expect = 3e-18
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 182
            + + V  +   + FY  +L +KLL   D P     +A L   E     +  L+    + 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIA 70

Query: 183 EYTK--GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDP 238
           ++ +  G     +AI    + +  + V    +E G ++     P+PG      +F+ P
Sbjct: 71  KFIQKRGEGIHHIAIGVKSIEERIQEV----KENGVQMI-NDEPVPGARGAQVAFLHP 123

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 82.9 bits (205), Expect = 3e-20
 Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 38/130 (29%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            R  H    V DL++   +Y    G ++     +PE   S  F+  G  +   +  L  +
Sbjct: 4   GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLD 63

Query: 82  YGVTSY---DIGTGFGHLAIATED-----------------------------------D 103
             +  +   +   G  H+ I  ++                                   D
Sbjct: 64  SPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKD 123

Query: 104 PDGYIFELIQ 113
             G + EL Q
Sbjct: 124 CGGVLVELEQ 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 74.8 bits (184), Expect = 4e-17
 Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 11/124 (8%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 182
            V + V DL ++  FY+  LG ++   +  PE   ++  +         +  L     + 
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIA 67

Query: 183 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV--- 236
            +    K      + I  D++  +   +    ++   +   +     G + K   F+   
Sbjct: 68  GFLQKNKAGGMHHICIEVDNINAAVMDL----KKKKIRSLSEE-VKIGAHGKPVIFLHPK 122

Query: 237 DPDG 240
           D  G
Sbjct: 123 DCGG 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 77.1 bits (190), Expect = 3e-18
 Identities = 26/124 (20%), Positives = 34/124 (27%), Gaps = 33/124 (26%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +   H      +   T  +Y E  G E+LR+   PE+      L  G  Q   +      
Sbjct: 4   KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-SQELEIFISDQF 62

Query: 82  YGVTSYDIGTGFGHLAIATED--------------------------------DPDGYIF 109
               SY    G  HLA   E                                 DPDG   
Sbjct: 63  PARPSYPEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPL 122

Query: 110 ELIQ 113
           EL +
Sbjct: 123 ELHE 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 67.8 bits (166), Expect = 9e-15
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 8/118 (6%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           V +   +   +  FY + LG ++LR    PE       L      +  +           
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-SQELEIFISDQFPARPS 67

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDG 240
           Y +      +A   + + +    +     E G  I  +P  +     K  +F  DPDG
Sbjct: 68  YPEALGLRHLAFKVEHIEEVIAFL----NEQG--IETEPLRVDDFTGKKMTFFFDPDG 119

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 77.1 bits (190), Expect = 5e-18
 Identities = 24/131 (18%), Positives = 37/131 (28%), Gaps = 39/131 (29%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ----SYFVVE 77
           +   H    V D D++ ++Y    G E++R+   P+       L  G  +       + +
Sbjct: 4   KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTD 63

Query: 78  LTYNYGVTSYDI---GTGFGHLAIATED-------------------------------- 102
             Y              G  HLA   ED                                
Sbjct: 64  SNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFF 123

Query: 103 DPDGYIFELIQ 113
           DPDG   EL +
Sbjct: 124 DPDGLPLELHE 134

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 68.6 bits (168), Expect = 6e-15
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 12/124 (9%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGY----AEEDQTTVLELAYSY 179
           V L V D  +S +FY   LG +++R    P+       L       E     + +  Y  
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCA 68

Query: 180 GVTEYTKGNAYAQ---VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 236
                +          +A   +DV  S + +      LG ++            K+  F 
Sbjct: 69  PPERISWPREACGLRHLAFYVEDVEASRQEL----IALGIRVEE-VRYDDYTGKKMAFFF 123

Query: 237 DPDG 240
           DPDG
Sbjct: 124 DPDG 127

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 78.8 bits (194), Expect = 2e-17
 Identities = 46/251 (18%), Positives = 66/251 (26%), Gaps = 61/251 (24%)

Query: 31  VGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVTS-- 86
             D     K+YT  FG        VP     YS A L      +   +      G+    
Sbjct: 40  TTDQSAAKKFYTSLFGWG-YDDNPVPGGGGVYSMATLNGEAVAAIAPMPPGAPEGMPPIW 98

Query: 87  ---------------------------YDIGTGFGHLAIATEDDPDGYIFELIQRGP--- 116
                                      +DIG   G ++  T  DP G    L Q      
Sbjct: 99  NTYIAVDDVDAVVDKVVPGGGQVMMPAFDIG-DAGRMSFIT--DPTGAAVGLWQANRHIG 155

Query: 117 -----TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTT 171
                    L    L       ++ FYE  +G+       +      +   G AE     
Sbjct: 156 ATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV---- 211

Query: 172 VLELAYSYGVTEYTKGN--AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLN 229
                   G  E        +  V  + DD   +A          GG++  +P  IP   
Sbjct: 212 -------GGCMEPPMPGVPNHWHVYFAVDDADATAAKA----AAAGGQVIAEPADIPS-V 259

Query: 230 TKITSFVDPDG 240
            +     DP G
Sbjct: 260 GRFAVLSDPQG 270

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 48.0 bits (114), Expect = 9e-07
 Identities = 22/115 (19%), Positives = 35/115 (30%), Gaps = 10/115 (8%)

Query: 126 LRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYT 185
           L+  D   + KFY    G         P      +M   A  +   V  +A         
Sbjct: 38  LQTTDQSAAKKFYTSLFGWG-YDDNPVPGGGGVYSM---ATLNGEAVAAIAPMPPGAPEG 93

Query: 186 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
               +    I+ DDV    + V       GG++      I     +++   DP G
Sbjct: 94  MPPIWN-TYIAVDDVDAVVDKV----VPGGGQVMMPAFDIGDA-GRMSFITDPTG 142

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 38.8 bits (90), Expect = 9e-04
 Identities = 17/126 (13%), Positives = 30/126 (23%), Gaps = 27/126 (21%)

Query: 16  WPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPE----- 70
               +    +         D  + +Y    G+          + Y     G         
Sbjct: 157 TLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEVGGCME 216

Query: 71  ----------QSYFVVE--------LTYNYGVTSYDIGT--GFGHLAIATEDDPDGYIFE 110
                       YF V+             G    +       G  A+ +  DP G IF 
Sbjct: 217 PPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSVGRFAVLS--DPQGAIFS 274

Query: 111 LIQRGP 116
           +++  P
Sbjct: 275 VLKAAP 280

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 72.6 bits (178), Expect = 3e-16
 Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 16/124 (12%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
             L V DL  +++FYE+ L   +    + P+    LA +        T+L +    G  E
Sbjct: 10  SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS-------TILLI---AGSEE 59

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 243
             K     Q     D + K    +    +E G +I R P  +P    +  +    DG   
Sbjct: 60  ALKPFRNTQATFLVDSLDKFKTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVI 113

Query: 244 VLVD 247
             V+
Sbjct: 114 EYVE 117

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 64.5 bits (157), Expect = 2e-13
 Identities = 13/131 (9%), Positives = 30/131 (22%), Gaps = 43/131 (32%)

Query: 23  RFLHAVYR--VGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
           + L  + R  V DL+  +++Y E     +  + ++P+     A +      +        
Sbjct: 4   KILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIA-------- 55

Query: 81  NYGVTSYDIGTGFGHLAIATED-------------------------------DPDGYIF 109
             G                 +                                  DG + 
Sbjct: 56  --GSEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVI 113

Query: 110 ELIQRGPTPEP 120
           E ++       
Sbjct: 114 EYVEHSKIEAE 124

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 71.3 bits (175), Expect = 6e-16
 Identities = 16/123 (13%), Positives = 45/123 (36%), Gaps = 14/123 (11%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           +   V ++  ++K +++   ++    +     K  +  +          +EL    G   
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDS 66

Query: 184 -----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-D 237
                  KG+    +    +D+ KS E +     ++G  + ++    P ++ +  +F+  
Sbjct: 67  PINKTIKKGSTPYHICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 238 PDG 240
            D 
Sbjct: 123 TDI 125

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 64.4 bits (157), Expect = 2e-13
 Identities = 21/131 (16%), Positives = 35/131 (26%), Gaps = 43/131 (32%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           +  H  Y V ++D  +K +     +E          K    F+  G  +    VEL    
Sbjct: 7   KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYR----VELVAPD 62

Query: 83  GVTS-----YDIGTGFGHLAIATED----------------------------------D 103
           G  S        G+   H+    ED                                   
Sbjct: 63  GEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 104 PDGYIFELIQR 114
            D  + EL+++
Sbjct: 123 TDIGLIELLEK 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 68.4 bits (167), Expect = 9e-15
 Identities = 22/123 (17%), Positives = 45/123 (36%), Gaps = 6/123 (4%)

Query: 127 RVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTK 186
             G L   I+FYE+ L +K +             M G         LE     G +    
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGL--PHADYHLEFTQYEGGSTAPV 74

Query: 187 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV 246
            +  + +     +  + A + + + + +G +        P  +    +  DPDGW+ V +
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKL-KHMGYQEVESEN--PYWSNGGVTIEDPDGWRIVFM 131

Query: 247 DNE 249
           +++
Sbjct: 132 NSK 134

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 51.1 bits (122), Expect = 2e-08
 Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 3/78 (3%)

Query: 30  RVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDI 89
             G LD  I++Y E   ++ + +       Y     G       + +E T   G ++  +
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHAD--YHLEFTQYEGGSTAPV 74

Query: 90  GTGFGHLAIATEDDPDGY 107
                 L     +  +  
Sbjct: 75  PHPDSLLVFYVPNAVELA 92

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 64.5 bits (157), Expect = 3e-13
 Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 9/124 (7%)

Query: 117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELA 176
               +    +   D  R+  FY  A G  +    + P++  ++   G   E         
Sbjct: 22  MTGRIVHFEIPFDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGY 78

Query: 177 YSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 236
            + G+ +  +      V +  + +  + E +    + LGGK      P+  +      F 
Sbjct: 79  INGGMMQRGEVTT-PVVTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFT 132

Query: 237 DPDG 240
           D +G
Sbjct: 133 DSEG 136

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 43.0 bits (101), Expect = 1e-05
 Identities = 20/118 (16%), Positives = 30/118 (25%), Gaps = 38/118 (32%)

Query: 31  VGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIG 90
             D DR   +Y + FG  +    ++P+  YS    G   E          N G+      
Sbjct: 33  FDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV 89

Query: 91  T---------------------------------GFGHLAIATEDDPDGYIFELIQRG 115
           T                                   G  A  T  D +G +  L +  
Sbjct: 90  TTPVVTVDVESIESALERIESLGGKTVTGRTPVGNMGFAAYFT--DSEGNVVGLWETA 145

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 63.7 bits (155), Expect = 7e-13
 Identities = 22/138 (15%), Positives = 33/138 (23%), Gaps = 41/138 (29%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--------KYSNAFLGFGPEQSY 73
           R+  H    V D+  +  +Y    G+  L   +VP          K +N     G     
Sbjct: 18  RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDL 77

Query: 74  FVVELTYNYGVTSYDIGTGFGHLAIATED------------------------------- 102
           F                T   HLA   +                                
Sbjct: 78  FGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVY 137

Query: 103 --DPDGYIFELIQRGPTP 118
             DPDG++ E+       
Sbjct: 138 FYDPDGFMIEIRCDPEAE 155

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 57.2 bits (138), Expect = 1e-10
 Identities = 26/125 (20%), Positives = 39/125 (31%), Gaps = 12/125 (9%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALA---MLGYAEEDQTTVLELAYSYG 180
           + L V D+  S  FY   LG+  L   + P     L     +        T+L+L     
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE 82

Query: 181 VTE-----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF 235
           ++               +A   D       V  +   E    I    GP+     +   F
Sbjct: 83  LSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVI--GENKIAIA--HGPVTRPTGRGVYF 138

Query: 236 VDPDG 240
            DPDG
Sbjct: 139 YDPDG 143

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 62.1 bits (150), Expect = 3e-12
 Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 9/123 (7%)

Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG 180
           +    + V D  ++  FY   LG  +   +     +    +   A +    +LE +    
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 181 VTEYTKGNAYAQV---AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVD 237
           VT + +      +   + + DD+    E +      LG + T++P  +           D
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDD 140

Query: 238 PDG 240
             G
Sbjct: 141 TCG 143

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 59.7 bits (144), Expect = 2e-11
 Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 34/125 (27%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R       V D  +   +YT   G  +     V  +++        P+ +  ++E + + 
Sbjct: 26  RIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHA 85

Query: 83  GVTSYD---IGTGFGHLAIATED-------------------------------DPDGYI 108
            VT +    +  G    + A +D                               D  G +
Sbjct: 86  AVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNL 145

Query: 109 FELIQ 113
            +L+Q
Sbjct: 146 IQLMQ 150

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 58.4 bits (141), Expect = 3e-11
 Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 36/125 (28%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           +  H      +L++  ++Y   FG       +   + +++ FL F  + +   +    + 
Sbjct: 3   KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFE-DGARLEIMSRTDV 61

Query: 83  GVTSYDIGTGFGHLAIATED-----------------------------------DPDGY 107
              +     G+ H+AI+T                                     DP+G 
Sbjct: 62  TGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGN 121

Query: 108 IFELI 112
             E+ 
Sbjct: 122 RIEIT 126

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 56.9 bits (137), Expect = 1e-10
 Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 9/120 (7%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           V L   +L +  +FY    G       ++         L + +      LE+     VT 
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDG---ARLEIMSRTDVTG 63

Query: 184 YTKGNA--YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDG 240
            T G    +A +AIST       E+   + ++ G  I     P    +    S V DP+G
Sbjct: 64  KTTGENLGWAHIAISTGTKEAVDELTEKL-RQDGFAIAG--EPRMTGDGYYESVVLDPEG 120

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 57.7 bits (139), Expect = 8e-11
 Identities = 17/133 (12%), Positives = 36/133 (27%), Gaps = 49/133 (36%)

Query: 25  LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ----SYFVVELTY 80
           +       D++ +  ++ +  G E+  +R  P+E++   +L                  +
Sbjct: 7   VVPELYCFDINVSQSFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKSRKW 62

Query: 81  NYGVTSYDIGTGFGHLAIATED-------------------------------------- 102
             G   + +G+G  +      D                                      
Sbjct: 63  LSGDLEFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFM 121

Query: 103 --DPDGYIFELIQ 113
              PDGY+F   Q
Sbjct: 122 VQTPDGYLFRFCQ 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 52.3 bits (125), Expect = 7e-09
 Identities = 17/121 (14%), Positives = 33/121 (27%), Gaps = 8/121 (6%)

Query: 125 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE--DQTTVLELAYSYGVT 182
            L   D+  S  F+   LG ++    + P+ +     L   +   +        +  G  
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKY--ERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDL 67

Query: 183 EYTKGNAYAQVAISTDDVYKS-AEVVNLVTQELGGKITRQPGPIPGLNTKITSF--VDPD 239
           E+  G+          D+      V       +   +  +             F    PD
Sbjct: 68  EFPLGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPD 126

Query: 240 G 240
           G
Sbjct: 127 G 127

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 56.7 bits (137), Expect = 3e-10
 Identities = 18/132 (13%), Positives = 28/132 (21%), Gaps = 43/132 (32%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVE---- 77
              +       DLD    +Y + FG+E++ K           F   G +           
Sbjct: 7   SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESS 61

Query: 78  LTYNYGVTSYDIGTGFGHLAIATED----------------------------------D 103
                         G GH     +D                                  D
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRD 121

Query: 104 PDGYIFELIQRG 115
           P G   E+ +  
Sbjct: 122 PAGNSVEVGEGK 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 18/119 (15%), Positives = 32/119 (26%), Gaps = 8/119 (6%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYGV 181
             L   DL  +  FY    G++++  +       KC   ML   +  ++     A +   
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLPGQLVFFKCGRQMLLLFDPQES---SRADANNP 68

Query: 182 TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
                           DD  +  E      + L   +           +      DP G
Sbjct: 69  IPRHGAVGQGHFCFYADDKAEVDEWKTRF-EALEIPVE--HYHRWPNGSYSVYIRDPAG 124

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 54.5 bits (131), Expect = 1e-09
 Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 26/135 (19%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDS-----------PELKCALAMLGYAEEDQTTV 172
           V + V  L  +I F+E  +G+ L    +                  +AM+     D  + 
Sbjct: 15  VSIVVESLDNAISFFE-EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVT--PDGHSR 71

Query: 173 LEL-AYSYGVTEYTKGNA------YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI 225
           +EL  +    T      A      Y +V  + +D+ +    +     + G ++  +    
Sbjct: 72  IELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQY 127

Query: 226 PGLNTKITSFVDPDG 240
              + ++      +G
Sbjct: 128 EN-SYRLCYIRGVEG 141

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 50.2 bits (120), Expect = 4e-08
 Identities = 18/143 (12%), Positives = 34/143 (23%), Gaps = 53/143 (37%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDV-----------PEEKYSNAFLGFGPE 70
            R  +    V  LD  I ++ E  G+ L  + +V             +    A +     
Sbjct: 10  LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG 68

Query: 71  QSYFVVELTYNYGVTSYDI-------GTGFGHLAIATED--------------------- 102
            S   +EL+      +            G+  +    ED                     
Sbjct: 69  HS--RIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQ 126

Query: 103 -----------DPDGYIFELIQR 114
                        +G +  L + 
Sbjct: 127 YENSYRLCYIRGVEGILIGLAEE 149

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 53.4 bits (128), Expect = 3e-09
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 11/121 (9%)

Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-ELKCALAMLGYAEEDQTTVLELAYSY 179
               +  V D+ RS  FY   LG+K+L    S    +   A+     E ++    +  + 
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILEDFGSFVLFETGFAIH----EGRSLEETIWRTS 64

Query: 180 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 239
              +   G     +     DV  + + +         ++            ++  F DPD
Sbjct: 65  SDAQEAYGRRNMLLYFEHADVDAAFQDI-----APHVELIHPLERQAW-GQRVFRFYDPD 118

Query: 240 G 240
           G
Sbjct: 119 G 119

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 42.2 bits (99), Expect = 3e-05
 Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 12/124 (9%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           RF++ +  V D++R+  +Y +  G+++L         +     GF   +   + E  +  
Sbjct: 8   RFVNPIPFVRDINRSKSFYRDRLGLKILED----FGSFVLFETGFAIHEGRSLEETIWRT 63

Query: 83  GVTSYDI-GTGFGHLAIATEDDPDGYIFEL-----IQRGPTPEPLCQVMLRVGDL-GRSI 135
              + +  G     L      D D    ++     +      +   Q + R  D  G +I
Sbjct: 64  SSDAQEAYGRRNMLLYFEH-ADVDAAFQDIAPHVELIHPLERQAWGQRVFRFYDPDGHAI 122

Query: 136 KFYE 139
           +  E
Sbjct: 123 EVGE 126

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 51.2 bits (122), Expect = 2e-08
 Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVT 182
           + L +GDL  S +FY +  G   +         +    +L            L    GV 
Sbjct: 9   ITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQ-----NLQEDVGVA 63

Query: 183 EYTKGNAY--AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
             ++  +   A    +  +V    E +       GG++ R     P    +     DPDG
Sbjct: 64  VTSRPGSMALAHNVRAETEVAPLMERL----VAAGGQLLRPADAPPHGGLRGY-VADPDG 118

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 50.7 bits (121), Expect = 2e-08
 Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 14/122 (11%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSP---ELKCALAMLGYAEEDQTTVLELAYSYG 180
           V +   D+     FY++  G + + +I SP    L    + +G+   +     EL     
Sbjct: 12  VNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGF---NAHEAYELMQLAQ 68

Query: 181 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQ--ELGGKITRQPGPIPGLNTKITSFVDP 238
            +E +       +    D       V  LV      G  + + P      +      +DP
Sbjct: 69  FSETSGI--KFLLNFDVDTK---EAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDP 122

Query: 239 DG 240
           + 
Sbjct: 123 ER 124

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 52.7 bits (126), Expect = 3e-08
 Identities = 23/182 (12%), Positives = 44/182 (24%), Gaps = 57/182 (31%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY----- 80
           H      + +    +Y    G+  + K  V ++  S   L +G +      EL++     
Sbjct: 33  HISMVTKNANENNHFYKNVLGLRRV-KMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPL 91

Query: 81  --------------------------------NYGVTSYDIGTGFGHLAIATEDDPDGYI 108
                                            + V   ++ T     A+  ED  +G  
Sbjct: 92  VGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFED-AEGLR 150

Query: 109 FELIQRGPTPEPLCQ------------------VMLRVGDLGRSIKFYEKALGMKLLRTI 150
             L+          +                  V L V  L +      +  G   +   
Sbjct: 151 LVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRN 210

Query: 151 DS 152
           D 
Sbjct: 211 DQ 212

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 17/85 (20%), Positives = 24/85 (28%), Gaps = 6/85 (7%)

Query: 21  KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
            +        V  LD+     TE FG        V        F     E    +V    
Sbjct: 178 IQGMGSVELTVRRLDKMASTLTEIFGYTE-----VSRNDQEAIFQSIKGEAFGEIVVKYL 232

Query: 81  NYGVTSYDIGTGFGHLAIATEDDPD 105
           +        G    HLAI  ++D +
Sbjct: 233 DGPTEKPGRG-SIHHLAIRVKNDAE 256

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 50.1 bits (120), Expect = 3e-08
 Identities = 20/124 (16%), Positives = 31/124 (25%), Gaps = 35/124 (28%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT 85
           H    V DLD + ++YTE    + L +     +  S A        S  + E        
Sbjct: 8   HVSLTVRDLDISCRWYTEILDWKELVRGR--GDTTSFAHGVLPGGLSIVLREHDGGGTDL 65

Query: 86  SYDIGTGFGHLAIATED---------------------------------DPDGYIFELI 112
             +   G  HL+ + E                                  D D    E +
Sbjct: 66  FDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALEAM 125

Query: 113 QRGP 116
               
Sbjct: 126 LGRE 129

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 19/117 (16%), Positives = 32/117 (27%), Gaps = 6/117 (5%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           V L V DL  S ++Y + L  K L          + A           + E         
Sbjct: 9   VSLTVRDLDISCRWYTEILDWKELVRGRGDTT--SFAHGVLPGGLSIVLREHDGGGTDLF 66

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
                    ++ S + +     +   +  + G   T            I +F D D 
Sbjct: 67  DETRPGLDHLSFSVESMTDLDVLEERL-AKAGAAFT---PTQELPFGWILAFRDADN 119

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 51.8 bits (124), Expect = 5e-08
 Identities = 36/276 (13%), Positives = 66/276 (23%), Gaps = 83/276 (30%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELT------ 79
           H   RV D+ + +++Y E  G+       +  +     +L    E   F + L       
Sbjct: 10  HVQLRVLDMSKALEHYVELLGLIE-----MDRDDQGRVYLKAWTEVDKFSLVLREADEPG 64

Query: 80  -----------------------YNYGVTSYDIGTGFGHLAIATEDDPDGYIFELI---- 112
                                  Y   V     G             P G+ FEL     
Sbjct: 65  MDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE 124

Query: 113 ------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE 154
                              +G         ++   +L  +   + K LG  L   +    
Sbjct: 125 YTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDEN 184

Query: 155 LKCALAMLGYAEEDQTTVLELA--------YSYGVTEYTKGNAYAQVAISTDDVYKSAEV 206
                  L  + +                  S+ +              + +D+ ++A++
Sbjct: 185 GTRVAQFLSLSTKAHDVAFIHHPEKGRLHHVSFHLE-------------TWEDLLRAADL 231

Query: 207 VNLVTQELGGKITRQPGP-IPGLNTKITSFVDPDGW 241
           +          I   P          I  F DP G 
Sbjct: 232 I----SMTDTSIDIGPTRHGLTHGKTIY-FFDPSGN 262

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 48.7 bits (116), Expect = 9e-08
 Identities = 19/120 (15%), Positives = 32/120 (26%), Gaps = 39/120 (32%)

Query: 25  LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV 84
           +     VG  +    +Y E  GME + K +  + K    +   G ++ +  VE  +N   
Sbjct: 14  VQVAAPVGCEEEARAFYGETIGMEEIPKPEELK-KRGGCWFKCGNQEIHIGVEQNFNPA- 71

Query: 85  TSYDIGTGFGHLAIATED------------------------------DPDGYIFELIQR 114
                     H A                                   DP G   E ++ 
Sbjct: 72  -------KRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFMEN 124

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 44.1 bits (104), Expect = 4e-06
 Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 16/118 (13%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 182
           QV   VG    +  FY + +GM+ +   +  + +         +E     + +    GV 
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQE-----IHI----GVE 65

Query: 183 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
           +       A  A     + +  + +     + G ++       P          DP G
Sbjct: 66  QNFNPAKRAHPAFYVLKIDEFKQEL----IKQGIEVIDDH-ARPD--VIRFYVSDPFG 116

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 48.5 bits (115), Expect = 7e-07
 Identities = 22/166 (13%), Positives = 43/166 (25%), Gaps = 45/166 (27%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMEL---------LRKRD---------VPEEKYSNAFLGF 67
            A         T+ ++T+  GM +         LR  +             +        
Sbjct: 14  RAELFSPKPQETLDFFTKFLGMYVTHREGQSVYLRGYEDPYPWSLKITEAPEAGMGHAAM 73

Query: 68  G---PEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELI------------ 112
               PE      +   +  V        FG+        PDG+  +L+            
Sbjct: 74  RTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWEAEKYVAPPEL 133

Query: 113 ------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 146
                        +G   + +  + L   D+      +E+ LG + 
Sbjct: 134 RSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRT 179

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 10/117 (8%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           +   V DL R  +  E     + +    S   + +L+   +        + +A   G   
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVY--ASDTEQFSLSREKFFLIGD---IWVAIMQGEKL 62

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
             +   +    I   D  + AE V     +LG  +      + G   +   F D D 
Sbjct: 63  AERSYNHIAFKIDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDN 114

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 44.9 bits (106), Expect = 3e-06
 Identities = 25/115 (21%), Positives = 37/115 (32%), Gaps = 13/115 (11%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGV 84
           H  + V DL+R  +     F    +   D  +       F   G       + +    G 
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGE 60

Query: 85  TSYDIGTGFGHLAI-ATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFY 138
                   + H+A    + D D Y   + + G    P      RV   GRSI FY
Sbjct: 61  K--LAERSYNHIAFKIDDADFDRYAERVGKLGLDMRP---PRPRVEGEGRSIYFY 110

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 33/254 (12%), Positives = 66/254 (25%), Gaps = 47/254 (18%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRD------------------VPEEKYSNAFLGF 67
           +    V DL ++ ++Y +  G+ +  + +                        + A   +
Sbjct: 20  YMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIAAVAAFAY 79

Query: 68  G---PE--QSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELI---------- 112
               P    +                 G   G       +DP G+ +E            
Sbjct: 80  RVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVERLT 139

Query: 113 -----QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE 167
                        L        D+ R   + E  LG ++   I   +     A +   + 
Sbjct: 140 QRYDLYSAGELVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQT 198

Query: 168 DQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPG 227
              T L       +      +  A       ++ +  +   +    +  +I R PG    
Sbjct: 199 VHDTALTGGNGPRM------HHVAFATHEKHNIIQICD--KMGALRISDRIERGPGRHGV 250

Query: 228 LNTKITSFVDPDGW 241
            N      +DPDG 
Sbjct: 251 SNAFYLYILDPDGH 264

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 18/117 (15%), Positives = 42/117 (35%), Gaps = 10/117 (8%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           + L V DL ++  F +     + +    S +   +L+   +        L +    G + 
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIY--SSGDKTFSLSKEKFFLIAG---LWICIMEGDSL 62

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
             +   +    I +++V +  E +    + LG ++ +   P      +   F D D 
Sbjct: 63  QERTYNHIAFQIQSEEVDEYTERI----KALGVEM-KPERPRVQGEGRSIYFYDFDN 114

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 39.0 bits (91), Expect = 3e-04
 Identities = 7/29 (24%), Positives = 11/29 (37%)

Query: 26 HAVYRVGDLDRTIKYYTECFGMELLRKRD 54
          H    V DL++T  +    F  E +    
Sbjct: 7  HITLIVKDLNKTTAFLQNIFNAEEIYSSG 35

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 15/101 (14%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV-ELTY 80
           +       +V +L+++ ++YTE  G E          ++   FL         V+ E   
Sbjct: 27  KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLD--SARRW--NFLWVSGRAGMVVLQEEKE 82

Query: 81  NYGVTSYDIGTGFGHLAIA-TEDDPDGYIFELIQRGPTPEP 120
           N+            H +    + + +     L  +G +   
Sbjct: 83  NWQQQ---------HFSFRVEKSEIEPLKKALESKGVSVHG 114

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDS 152
           V ++V +L +S +FY + LG +      +
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLLDSA 60

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 21/123 (17%), Positives = 37/123 (30%), Gaps = 42/123 (34%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +   H    V DL +++ ++ E  G+ L  + +      + A+L  G       V L+Y+
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLW----VCLSYD 52

Query: 82  YGVTSYDIGT-GFGHLAIATED-------------------------------DPDGYIF 109
                       + H A    +                               DPDG+  
Sbjct: 53  EARQYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKL 112

Query: 110 ELI 112
           EL 
Sbjct: 113 ELH 115

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 38.6 bits (90), Expect = 4e-04
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDS 152
           + L V DL +S+ F+ + LG+ L    ++
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNT 36

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 18/121 (14%)

Query: 121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAE-EDQTTVLELAYSY 179
           L Q+ + V ++ +     E  L  K              A  G+A+    +  L L+ ++
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKADY-----------ANDGFAQFTIGSHCLMLSQNH 54

Query: 180 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 239
            V      +    + I  +DV ++ + +     ELG K+   P       T+      P 
Sbjct: 55  LVPLENFQSG-IIIHIEVEDVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPA 108

Query: 240 G 240
           G
Sbjct: 109 G 109

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 24/119 (20%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           ++L V D+  +I+FYE+ LG   +      + + AL             +E         
Sbjct: 27  LVLTVSDISTTIRFYEEVLGFSAVT---FKQNRKALIFGAQKINLHQQEMEFEPKASRPT 83

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITS--FVDPDG 240
               +     +   +DV            + G  I   P    G   +I S    DPDG
Sbjct: 84  PGSADLCFITSTPINDVVSEI-------LQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 21/127 (16%), Positives = 33/127 (25%), Gaps = 41/127 (32%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
            R  H V  V D+  TI++Y E  G   +  +       +   L FG ++     +    
Sbjct: 22  DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEF 75

Query: 82  YGVTSYDIGTGFGHLAIATED-----------------------------------DPDG 106
               S           I +                                     DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

Query: 107 YIFELIQ 113
            + E+ Q
Sbjct: 136 NLIEISQ 142

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 44.4 bits (105), Expect = 4e-06
 Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 13/100 (13%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
               H    V DL  +I +Y +  G  L  + D        A+L  G         L  +
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLW------LCLS 50

Query: 82  YGVTSYDIGTGFGHLAIA-TEDDPDGYIFELIQRGPTPEP 120
                      + H A      D   +  +L   G     
Sbjct: 51  REPQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWK 90

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 39.0 bits (91), Expect = 3e-04
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDS 152
           + L V DL  SI FY   LG +L    D 
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQ 36

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 43.9 bits (104), Expect = 4e-06
 Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 17/119 (14%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           + L V D+  + +F EK  G+    T  +              ++   +L L     V +
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA--------FAVMRDNDGFILTLMKGKEV-Q 57

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWK 242
           Y K         S + V K  + +    +E G  +     P    +        P G+ 
Sbjct: 58  YPKTFHVGFPQESEEQVDKINQRL----KEDGFLV----EPPKHAHAYTFYVEAPGGFT 108

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 17/121 (14%), Positives = 27/121 (22%), Gaps = 44/121 (36%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
              H    V D+    ++  + FG+     R        NAF         F++ L    
Sbjct: 3   GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-------NAFAVMRDNDG-FILTLMKGK 54

Query: 83  GVTSYDIGTGFGHLAIATED--------------------------------DPDGYIFE 110
            V          H+    E                                  P G+  E
Sbjct: 55  EVQ----YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIE 110

Query: 111 L 111
           +
Sbjct: 111 V 111

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 46.2 bits (109), Expect = 4e-06
 Identities = 35/254 (13%), Positives = 66/254 (25%), Gaps = 47/254 (18%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRD------------------VPEEKYSNAFLGF 67
           +A   V DL ++  +Y +  G+ +  + +                        +   + F
Sbjct: 20  YAELVVTDLAKSRNFYVDVLGLHVSYEDENQIYLRSFEEFIHHNLVLTKGPVAALKAMAF 79

Query: 68  GPEQSYFVVELT-----YNYGVTSYDIGTGFGHLAIATEDDPDGYIFELI---------- 112
                  V +                 G   G       +DP G+ +E            
Sbjct: 80  RVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLH 139

Query: 113 -----QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE 167
                        L        D+ R  K+ E  LG ++   I   E     A +     
Sbjct: 140 MRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT 198

Query: 168 DQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPG 227
                   A + G     + +  A       ++ +  +   +    +  +I R PG    
Sbjct: 199 VHD----TALTGG--NGPRLHHVAFSTHEKHNIIQICD--KMGALRISDRIERGPGRHGV 250

Query: 228 LNTKITSFVDPDGW 241
            N      +DPD  
Sbjct: 251 SNAFYLYILDPDNH 264

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 43.5 bits (102), Expect = 8e-06
 Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 7/94 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           RR  H V  V  +  T  +Y++  GME++  ++          L FG +Q + + E+   
Sbjct: 26  RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFG-DQKFNLHEVGKE 78

Query: 82  YGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRG 115
           +   +     G   + + TE   +  I  L    
Sbjct: 79  FEPKAAHPVPGSLDICLITEVPLEEMIQHLKACD 112

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           +++ V  +  +  FY K LGM+++   +          L + ++                
Sbjct: 31  IVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFEPKAA 84

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITS--FVDPDG 240
           +    +     I+   + +  + +    +     I   P P  G    I S  F DPD 
Sbjct: 85  HPVPGSLDICLITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 25/176 (14%), Positives = 43/176 (24%), Gaps = 56/176 (31%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELT-- 79
            R  HA  RV +L+  I +Y    G+          +     +     E+ +    +   
Sbjct: 7   LRPGHAQVRVLNLEEGIHFYRNVLGLVE-----TGRDDQGRVYFKCWDERDHSCYIIREA 61

Query: 80  ---------------------------YNYGVTSYDIGTGFGHLAIATEDDPDGYIFELI 112
                                      Y    T    G           + P G++ EL 
Sbjct: 62  DTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELY 121

Query: 113 ----------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 146
                                 + G  P  L   +L   ++    K + + LG  L
Sbjct: 122 AEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYL 177

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 1e-05
 Identities = 36/251 (14%), Positives = 69/251 (27%), Gaps = 82/251 (32%)

Query: 14  LEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
           +   + + RR L +           K Y  C    LL   +V   K  NAF         
Sbjct: 227 IHSIQAELRRLLKS-----------KPYENC----LLVLLNVQNAKAWNAFNL----SCK 267

Query: 74  FVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGY-------IFELIQRGPT---PEPLCQ 123
            ++  T    VT +       H+++  +             +            P  +  
Sbjct: 268 ILL-TTRFKQVTDFLSAATTTHISL--DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 124 VM-LRVGDLGRSIK-------FYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLEL 175
               R+  +  SI+        ++     KL   I+S     +L +L  AE  +      
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES-----SLNVLEPAEYRK------ 373

Query: 176 AYSYGVTEYTKGNAYAQVAISTDDV------------YKSAEVVNLVTQELGGK--ITRQ 221
                         + ++++                       V +V  +L     + +Q
Sbjct: 374 -------------MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420

Query: 222 PGP----IPGL 228
           P      IP +
Sbjct: 421 PKESTISIPSI 431

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 16/99 (16%), Positives = 26/99 (26%), Gaps = 9/99 (9%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV 76
             ++     H      DLD    +Y    G +L R+            +         V 
Sbjct: 3   AMRNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP--------DRITLDFFGDQLVC 54

Query: 77  ELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRG 115
            L+  +          FG +    +   D       QRG
Sbjct: 55  HLSDRWDREVSMYPRHFG-ITFRDKKHFDNLYKLAKQRG 92

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 38.2 bits (88), Expect = 5e-04
 Identities = 16/117 (13%), Positives = 31/117 (26%), Gaps = 9/117 (7%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           + +   DL  +  FY   LG KL R       +  L   G        V  L+  +    
Sbjct: 13  LAIPARDLDEAYDFYVTKLGCKLAR---RYPDRITLDFFGD-----QLVCHLSDRWDREV 64

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
                 +              ++           ++R+   +   +      +DP  
Sbjct: 65  SMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFF-LIDPSN 120

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 41.9 bits (98), Expect = 2e-05
 Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 14/118 (11%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 182
            + +    L   + FY   +G +   +              +          L YS    
Sbjct: 9   SITINTSHLQGMLGFYR-IIGFQFTASKVDK------GSEVHRAVHNGVEFSL-YSIQNP 60

Query: 183 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
           +        Q+     D+    + V  + +  G      P  +P     I   +DPDG
Sbjct: 61  Q-RSQIPSLQLGFQITDL---EKTVQELVKIPGAMCILDPTDMPDGKKAI--VLDPDG 112

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 41.8 bits (98), Expect = 2e-05
 Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 7/94 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
               H V  V D+  T  +Y +  GM+ +              L FG ++     +L   
Sbjct: 9   SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGR------IALEFGHQKINL-HQLGNE 61

Query: 82  YGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRG 115
           +   + ++  G   L   T+      +  +  +G
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQG 95

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 25/175 (14%), Positives = 47/175 (26%), Gaps = 47/175 (26%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
                      +LDR + +YT   G + + ++           +  G  Q  F       
Sbjct: 25  TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRAAADGT 78

Query: 82  YG-------VTSYDIGTGFGHLA-----IATED-----------------DPDGYIFELI 112
                    + +     G   L+     +   D                 DP G I ELI
Sbjct: 79  KPFYHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELI 138

Query: 113 QRGPTPEP------------LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL 155
            R                  + ++ +   D+ ++    ++A     L  I+   L
Sbjct: 139 SRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIEPAGL 193

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 41.8 bits (98), Expect = 3e-05
 Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 6/119 (5%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           V + V  L  SI F++  LG        S     +            T           +
Sbjct: 24  VEINVDHLEESIAFWDWLLGELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTFHRK 83

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP-GPIPGLNTKITSFV-DPDG 240
            T  N  A  A S + V +  + +    +E G  I  +   P  G       F  DP+ 
Sbjct: 84  RTGLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNR 138

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 40.6 bits (95), Expect = 9e-05
 Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 9/97 (9%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
              H    V  L+ +I ++    G                    +   ++Y V   T + 
Sbjct: 20  MLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTEDR 74

Query: 83  GVTSY--DIGTGFGHLAI--ATEDDPDGYIFELIQRG 115
             T       TG  HLA   A+ +  D    +L +RG
Sbjct: 75  FQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERG 111

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 41.7 bits (98), Expect = 4e-05
 Identities = 19/117 (16%), Positives = 33/117 (28%), Gaps = 8/117 (6%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           V L   D  R++ +  +  G +LL    +       A L         ++          
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTG--GGIVMVRRTGEPYTVS 62

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
              G+   QV +   DV +            G  I +     P    +     D +G
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRS----TAAGADIVQPLQDKPW-GLRQYLVRDLEG 114

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 43.0 bits (101), Expect = 5e-05
 Identities = 24/162 (14%), Positives = 42/162 (25%), Gaps = 41/162 (25%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRD----------------VPEEKYSNAFLGFG- 68
           +  + V D+     + T+  G+      D                   E    AF G+  
Sbjct: 7   YMGFAVSDVAAWRSFLTQKLGLMEAGTTDNGDLFRIDSRAWRIAVQQGEVDDLAFAGYEV 66

Query: 69  --PEQSYFVVELTYNYGVTSYDIGTGF----GHLAIATEDDPDGYIFELI---------- 112
                   + +     G+             G   + T  DP G   E+           
Sbjct: 67  ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKP 126

Query: 113 --------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 146
                         + L   +  V D  +++ FY   LG +L
Sbjct: 127 FLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQL 168

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 42.2 bits (99), Expect = 9e-05
 Identities = 26/163 (15%), Positives = 50/163 (30%), Gaps = 48/163 (29%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFL-GFGPEQSYFVV-------E 77
           +  Y V D D    +Y + +G+E + +        +NA+    G ++ + V         
Sbjct: 11  YVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRADENR 64

Query: 78  LTY-NYGVTSYD---------IGTGFGHLAIATED------------DPDGYIFEL---- 111
           +        S              G    +                  PDG +FE+    
Sbjct: 65  IDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDV 124

Query: 112 -------IQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKL 146
                  + R    P  +  ++L   +    +KF+   LG K+
Sbjct: 125 AKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKV 167

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 40.8 bits (95), Expect = 9e-05
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 19/125 (15%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
              H  Y   D D   KYY E FG   L + + PE+      +                 
Sbjct: 9   CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPA-------------- 54

Query: 83  GVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKAL 142
                 +      + +    + +  + + + +      L  +  RV D+        +  
Sbjct: 55  ----AKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRER- 109

Query: 143 GMKLL 147
           G++LL
Sbjct: 110 GVQLL 114

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 38.1 bits (88), Expect = 7e-04
 Identities = 19/134 (14%), Positives = 44/134 (32%), Gaps = 16/134 (11%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYG 180
            V     D   + K+Y++  G   L   ++PE  +   +        +  T +++     
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 71

Query: 181 --------VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKI 232
                   + ++        +A   DD+   +       +E G ++     P  G     
Sbjct: 72  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSA----TLRERGVQLL-YDEPKLGTGGNR 126

Query: 233 TSFVDP-DGWKTVL 245
            +F+ P  G   ++
Sbjct: 127 INFMHPKSGKGVLI 140

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 38/266 (14%), Positives = 63/266 (23%), Gaps = 52/266 (19%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRD-----------------VPEEKYSNAF 64
           R   +      D+    +Y  +  GM   +                    VP E      
Sbjct: 4   RSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPEGALYLRMDDFPARLVVVPGEHDRLLE 63

Query: 65  LGFG---PEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE----DDPDGYIFELI----- 112
            G+     E    +       G    +            E     DP G   E+      
Sbjct: 64  AGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTAL 123

Query: 113 --QRGPTPEP---------LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAM 161
             +R  +P           +  V+L   D   ++ FY   LG +L  ++  P        
Sbjct: 124 EHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPA 183

Query: 162 LGYAE-----EDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 216
            G                LA+    T  +            DDV    +           
Sbjct: 184 DGPPAWLRFFGCNPRHHSLAFLPMPTS-SGIVHLMVEVEQADDVGLCLDRA----LRRKV 238

Query: 217 KITRQPGP-IPGLNTKITSFVDPDGW 241
            ++   G  +  L         P G+
Sbjct: 239 PMSATLGRHVNDLMLSFY-MKTPGGF 263

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 19/126 (15%), Positives = 40/126 (31%), Gaps = 13/126 (10%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           R  +     V D++ +++ Y E FG+E  +     +            +           
Sbjct: 18  RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDD----------YSKAHTKFNGRPTK 67

Query: 82  YGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKA 141
                     G   L +   D+      E + +    E +  +   V D+ R ++     
Sbjct: 68  ARAKLAFFELGPLQLELIEPDENPSTWREFLDKN--GEGIHHIAFVVKDMDRKVEEL-YR 124

Query: 142 LGMKLL 147
            GMK++
Sbjct: 125 KGMKVI 130

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 15/118 (12%)

Query: 125 MLRVGDLGRSIKFYEKALGMKLL-RTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
            L + D+  ++  +   LG +L  R  +   L+ +   L   EE    ++          
Sbjct: 12  FLHIPDMQEALTLFCDTLGFELKYRHSNYAYLELSGCGLRLLEEPARKIIP--------- 62

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP-GLNTKITSFVDPDG 240
              G A   + I   D+      ++   + L          +P G   +      PDG
Sbjct: 63  --DGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYG--QREFQVRMPDG 116

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 40.9 bits (95), Expect = 2e-04
 Identities = 20/175 (11%), Positives = 42/175 (24%), Gaps = 48/175 (27%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSN-AFLGFGPEQSYFVVELTYNYGV 84
           H    VG       +Y    G+ L+++    ++  +   + G    +   ++      G 
Sbjct: 11  HITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGA 70

Query: 85  TSYDIGTG-FGHLAIATED-------------------------------DPDGYIFELI 112
               IG G  G  +                                    DP G   E++
Sbjct: 71  RQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIV 130

Query: 113 QRGPTPEPLCQ---------------VMLRVGDLGRSIKFYEKALGMKLLRTIDS 152
           +R                          L      ++    E  +G++ +     
Sbjct: 131 EREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGD 185

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 40.4 bits (94), Expect = 3e-04
 Identities = 37/263 (14%), Positives = 73/263 (27%), Gaps = 58/263 (22%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRD-----------------VPEEKYSNAFLGFG 68
           +    V D D    + T+  G+++L + +                     +    +LG+ 
Sbjct: 12  YMGISVKDPDAWKSFATDMLGLQVLDEGEKDRFYLRMDYWHHRIVVHHNGQDDLEYLGWR 71

Query: 69  -------PEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELI--------- 112
                        +++  Y   +           L +   +DP G   E+          
Sbjct: 72  VAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSN 131

Query: 113 ----------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAML 162
                     +     + L   ++R  D+  + KFY   LG +       P      A L
Sbjct: 132 PFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFYSL-LGFRGDVEYRIPLPNGMTAEL 190

Query: 163 GYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP 222
            +   +      +A+        + N         +D+  + +       +    I  Q 
Sbjct: 191 SFMHCN-ARDHSIAFGAM-PAAKRLNHLMLEYTHMEDLGYTHQQF----VKNEIDIALQL 244

Query: 223 G--PIPGLNTKITSF--VDPDGW 241
           G       N K  +F    P GW
Sbjct: 245 GIHA----NDKALTFYGATPSGW 263

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 35/276 (12%), Positives = 68/276 (24%), Gaps = 68/276 (24%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRD----------------VPEEKYSNAFLGFG- 68
           +  + V D+     + T+  G+                        P E    A+ G   
Sbjct: 7   YLGFAVKDVPAWDHFLTKSVGLMAAGSAGDAALYRADQRAWRIAVQPGELDDLAYAGLEV 66

Query: 69  ------PEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELI---------- 112
                    +  + +    +      +      + +    DP G   E+           
Sbjct: 67  DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAEIFHEP 126

Query: 113 --------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL---LRTIDSPELKCALAM 161
                         + +   +  V D  +++ FY + LG  L   +     PE       
Sbjct: 127 FLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHF 186

Query: 162 LGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ 221
           L            +A +       + + +   A + DDV  + + +              
Sbjct: 187 LHC----NGRHHTIALAAFPIP-KRIHHFMLQANTIDDVGYAFDRL------------DA 229

Query: 222 PGPI---PG--LNTKITSF--VDPDGWKTVLVDNED 250
            G I    G   N +  SF    P     V      
Sbjct: 230 AGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP 265

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 37.7 bits (87), Expect = 9e-04
 Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 18/133 (13%)

Query: 111 LIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAE--ED 168
           L  +G    P    +L V +   S +FY+  LG+       SP          ++     
Sbjct: 17  LYFQGHMTHPD-FTILYVDNPPASTQFYKALLGVD--PVESSP---------TFSLFVLA 64

Query: 169 QTTVLELAYSYGVTEYTKGNA-YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPG 227
               L L   + V           ++A   ++  +  E      +  G  + +QP  +  
Sbjct: 65  NGMKLGLWSRHTVEPKASVTGGGGELAFRVENDAQVDETFAGW-KASGVAMLQQPAKMEF 123

Query: 228 LNTKITSFVDPDG 240
             T   +  DPD 
Sbjct: 124 GYT--FTAADPDS 134

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	258
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	100.0
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.98
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.98
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.98
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.97
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.97
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.97
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.96
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.96
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.96
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.96
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.96
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.96
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.96
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.96
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.94
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.93
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.88
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.87
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.87
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.87
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.87
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.84
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.83
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.83
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.82
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.82
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.82
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.82
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.79
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.79
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.79
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.78
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.78
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.77
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.77
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.77
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.77
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.76
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.76
3ghj_A	141	Putative integron gene cassette protein; integron	99.76
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.75
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.74
2i7r_A	118	Conserved domain protein; structural genomics cons	99.73
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.73
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.73
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.73
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.73
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.72
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.72
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.72
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.72
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.72
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.72
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.72
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.71
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.71
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.71
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.71
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.71
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.7
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.7
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.7
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.7
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.7
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.7
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.68
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.68
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.68
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.68
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.67
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.67
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.67
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.64
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.63
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.63
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.62
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.61
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.59
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.58
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.57
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.57
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.56
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.55
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.54
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.54
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.54
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.54
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.53
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.53
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.53
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.52
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.52
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.51
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.5
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.5
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.49
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.48
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.48
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.46
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.46
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.45
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.45
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.45
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.45
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.45
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.45
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.45
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.44
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.42
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.41
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.41
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.4
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.39
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.38
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.35
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.32
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.32
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.32
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.31
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.31
3ghj_A	141	Putative integron gene cassette protein; integron	99.3
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.3
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.3
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.28
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.26
2i7r_A	118	Conserved domain protein; structural genomics cons	99.26
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.26
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.25
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.23
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.23
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.23
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.23
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.22
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.22
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.2
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.2
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.19
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.13
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.13
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.12
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.12
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.11
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.08
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.06
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.06
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.04
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.04
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.04
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.04
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.02
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.01
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	98.91
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	98.79
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	98.77
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	98.72
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	98.68
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	98.62
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	98.51
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	98.4
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.28
1xy7_A	166	Unknown protein; structural genomics, protein stru	98.23
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	98.17
1tsj_A	139	Conserved hypothetical protein; structural genomic	97.69
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	97.56
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	97.44
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.41
3l20_A	172	Putative uncharacterized protein; hypothetical pro	96.89
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	96.03
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	94.69
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	91.91
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	89.21
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	84.09

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=100.00  E-value=7e-35  Score=248.42  Aligned_cols=226  Identities=33%  Similarity=0.626  Sum_probs=175.4

Q ss_pred             CcccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccC-----------CCCeEEEEeccCCCCceeEEEEEeecCC
Q 025083           16 WPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-----------EEKYSNAFLGFGPEQSYFVVELTYNYGV   84 (258)
Q Consensus        16 ~~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~   84 (258)
                      |...++++++||+|.|+|+++|++||+++|||++..+...+           ++.+..++++++.......++|+.+.+.
T Consensus        20 ~~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~   99 (330)
T 3zi1_A           20 FQSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGV   99 (330)
T ss_dssp             GGGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTC
T ss_pred             eeecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCC
Confidence            55555789999999999999999999999999998776544           4467788888776556678899887665


Q ss_pred             CcccCCCCeeeEEEEcCC-----------------------CCCCcEEEEEECCC-CCCCceeeeEEecChhhHHHHHHH
Q 025083           85 TSYDIGTGFGHLAIATED-----------------------DPDGYIFELIQRGP-TPEPLCQVMLRVGDLGRSIKFYEK  140 (258)
Q Consensus        85 ~~~~~~~~~~hia~~v~d-----------------------DP~G~~iel~~~~~-~~~~i~hv~l~v~d~~~s~~FY~~  140 (258)
                      ..+..+.|+.|+||.|+|                       ||||+.|||++... ...++.|+.|.|+|++++.+||++
T Consensus       100 ~~~~~~~g~~hiaf~V~d~~~~l~~~G~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~Dl~~a~~FY~~  179 (330)
T 3zi1_A          100 GDYKLGNDFMGITLASSQAVSNARKLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCN  179 (330)
T ss_dssp             CCCCBCSSEEEEEEECHHHHHHHHHHTCCCEEEETTEEEEECTTSCEEEEESSCCTTSCSEEEEEEEESCHHHHHHHHHH
T ss_pred             CccccCCCeeEEEEECchHHHHHHHcCCceeccCCceEEEECCCCCEEEEEecCCCCCCceeEEEEECCCHHHHHHHHHH
Confidence            555567799999999998                       99999999998763 457899999999999999999999


Q ss_pred             hcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC--ChHHHHHHHHHHHHHhCCee
Q 025083          141 ALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNLVTQELGGKI  218 (258)
Q Consensus       141 ~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~--d~~~~~~~l~~~~~~~G~~i  218 (258)
                      +|||++.......+    .+++..++.  ...+++.....  +...+.++.|++|.|+  |+++++++|    +++|+++
T Consensus       180 vLG~~~~~~~~~~~----~~~l~~g~~--~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~dld~~~~rl----~~~G~~i  247 (330)
T 3zi1_A          180 LLGMKIYENDEEKQ----RALLGYADN--QCKLELQGVKG--GVDHAAAFGRIAFSCPQKELPDLEDLM----KRENQKI  247 (330)
T ss_dssp             TTCCEEEEEETTTT----EEEEESSTT--SCEEEEEECSS--CCCCBTTCCEEEEEECGGGHHHHHHHH----HHTTCEE
T ss_pred             hcCCEEEeeccCCc----EEEEEeCCc--eEEEEECCCCC--CCCCCCCCceEEEEEEcccHHHHHHHH----HHcCCcE
Confidence            99999987654321    345665443  45666654432  2233457889999996  556666666    9999998


Q ss_pred             ecCCccC--CC-CCeeEEEEECCCCCEEEEEcchhhhH
Q 025083          219 TRQPGPI--PG-LNTKITSFVDPDGWKTVLVDNEDFLK  253 (258)
Q Consensus       219 ~~~p~~~--~~-~~~~~~~~~DPdG~~iel~~~~~~~~  253 (258)
                      ..+|...  ++ .+.+++||+|||||+|||++...+..
T Consensus       248 ~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~~  285 (330)
T 3zi1_A          248 LTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFRE  285 (330)
T ss_dssp             EEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHHH
T ss_pred             ecCceecccCCCCceEEEEEECCCCCEEEEEEeccccc
Confidence            8776542  21 13588999999999999999887663

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.98  E-value=1.4e-30  Score=224.16  Aligned_cols=209  Identities=21%  Similarity=0.225  Sum_probs=158.4

Q ss_pred             cccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeE
Q 025083           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (258)
Q Consensus        17 ~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi   96 (258)
                      +...|+++.||.|.|+||+++++||+++|||+++.+..      ..+|+..........+.+...       ...++.|+
T Consensus        11 P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~-------~~~gl~~~   77 (365)
T 4ghg_A           11 PAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKG-------PVAALKAM   77 (365)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEE
T ss_pred             CCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccC-------CCCCcceE
Confidence            34458999999999999999999999999999987632      234454433333444555432       13478899


Q ss_pred             EEEcCC------------------------------------CCCCcEEEEEECCC---------------CCCCceeee
Q 025083           97 AIATED------------------------------------DPDGYIFELIQRGP---------------TPEPLCQVM  125 (258)
Q Consensus        97 a~~v~d------------------------------------DP~G~~iel~~~~~---------------~~~~i~hv~  125 (258)
                      +|.|++                                    ||+|+.|||+....               .+.++.|+.
T Consensus        78 a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~  157 (365)
T 4ghg_A           78 AFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFN  157 (365)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEE
Confidence            999986                                    99999999996531               246899999


Q ss_pred             EEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHHHH
Q 025083          126 LRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAE  205 (258)
Q Consensus       126 l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~  205 (258)
                      |.|+|++++.+||++ |||.+......+.+.....|+.++..  ++.+.+...       .+.+++|++|+|+|++++..
T Consensus       158 L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~--hH~la~~~~-------~~~~lhHvaf~v~d~d~v~~  227 (365)
T 4ghg_A          158 QVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT--VHDTALTGG-------NGPRLHHVAFSTHEKHNIIQ  227 (365)
T ss_dssp             EEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSS--SCSEEEEES-------SBSEEEEEEEECSSHHHHHH
T ss_pred             EeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCc--ccceeeecC-------CCCceeEEEEecCCHHHHHH
Confidence            999999999999965 99998887665555556778876553  556655421       23489999999999876654


Q ss_pred             HHHHHHHHhCCe--eecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          206 VVNLVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       206 ~l~~~~~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                       ..++|+++|+.  +.++|+++..+...++||+||+|++||+....
T Consensus       228 -~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g  272 (365)
T 4ghg_A          228 -ICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQD  272 (365)
T ss_dssp             -HHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             -HHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCC
Confidence             44677888884  67888888665668899999999999998654

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.98  E-value=6e-30  Score=218.13  Aligned_cols=218  Identities=12%  Similarity=0.092  Sum_probs=148.8

Q ss_pred             ccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCC--CCeEEEEeccCCCCceeEEEEEeecCCCcc-cCCCCee
Q 025083           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE--EKYSNAFLGFGPEQSYFVVELTYNYGVTSY-DIGTGFG   94 (258)
Q Consensus        18 ~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~~~~   94 (258)
                      .+++++++||+|.|+|++++++||+++|||+++.+..+.+  +.+..+| +......+..+++......... ....++.
T Consensus         3 ~~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~-~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~   81 (335)
T 3oaj_A            3 AKKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYF-GNEGGKPGTIITFFPWAGARQGVIGDGQVG   81 (335)
T ss_dssp             CCCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEE-ESTTCCTTSEEEEEECTTCCBCBCCBSEEE
T ss_pred             cccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEE-ecCCCCCCcEEEEEECCCCCCCCCCCCceE
Confidence            3468899999999999999999999999999988754332  2333333 3221122345666543322211 1234679


Q ss_pred             eEEEEcC--C-----------------------------CCCCcEEEEEECCC---------------CCCCceeeeEEe
Q 025083           95 HLAIATE--D-----------------------------DPDGYIFELIQRGP---------------TPEPLCQVMLRV  128 (258)
Q Consensus        95 hia~~v~--d-----------------------------DP~G~~iel~~~~~---------------~~~~i~hv~l~v  128 (258)
                      |+||.|+  |                             ||||+.|||++..+               ...+|+||+|.|
T Consensus        82 hiaf~V~~~dl~~~~~rL~~~Gv~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i~gl~Hv~L~v  161 (335)
T 3oaj_A           82 VTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLS  161 (335)
T ss_dssp             EEEEEECTTCHHHHHHHHHHTTCCCEEEEETTEEEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSCCEEEEEEEEC
T ss_pred             EEEEEecHHHHHHHHHHHHhCcceeeeeccCCcEEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhhccccceEEEE
Confidence            9999999  5                             99999999998652               125799999999


Q ss_pred             cChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccC-CceeeEEEEECChHHHHHHH
Q 025083          129 GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKG-NAYAQVAISTDDVYKSAEVV  207 (258)
Q Consensus       129 ~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~-~g~~hi~~~v~d~~~~~~~l  207 (258)
                      +|++++.+||+++|||++..+..    + ... +..++.  +..+.+...........+ .+++|+||.|+|.++ +.++
T Consensus       162 ~Dle~t~~FY~~vLG~~~~~~~~----~-~~~-~~~g~~--~~~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~-l~~~  232 (335)
T 3oaj_A          162 EQPDKTADLLENIMGLERVGKEG----D-FVR-YRSAGD--IGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDED-QLDW  232 (335)
T ss_dssp             SSHHHHHHHHHHTSCCEEEEEET----T-EEE-EECSSS--SSCEEEEESSCCCBCBCSBTEEEEEEEEESSHHH-HHHH
T ss_pred             CCHHHHHHHHHHHhCCEEeeccC----C-EEE-EEeCCC--CcEEEEEeCCCCCcCCCCCcceEEEEEEcCCHHH-HHHH
Confidence            99999999999999999887642    1 222 222221  344555543222111122 369999999999543 3444


Q ss_pred             HHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          208 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       208 ~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      .++|+++|+++.... ...  ..+++||+||+|++|||+..
T Consensus       233 ~~~L~~~G~~~~~~~-~r~--~~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          233 QRYIASHGYGVTPVR-DRN--YFNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             HHHHHHTTCCCCCCE-ECS--SSEEEEEECTTSCEEEEEES
T ss_pred             HHHHHHCCCCccccc-cCC--cEEEEEEECCCCcEEEEEeC
Confidence            456699999865322 211  24789999999999999987

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.98  E-value=1.6e-30  Score=222.42  Aligned_cols=207  Identities=15%  Similarity=0.179  Sum_probs=152.8

Q ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEE
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~   98 (258)
                      ..+++++||.|.|+|++++++||+++|||++..+..   +  ..++...+. .....+.+...       ...++.|++|
T Consensus         7 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~--~~~l~~~~~-~~~~~l~l~~~-------~~~g~~~~af   73 (339)
T 3lm4_A            7 FDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---Q--SVYLRGYED-PYPWSLKITEA-------PEAGMGHAAM   73 (339)
T ss_dssp             GSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---T--EEEEECTTC-SSSCSEEEEEC-------SSCEEEEEEE
T ss_pred             CCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---C--EEEEEecCC-CCceEEEEeeC-------CCCCcceEEE
Confidence            357899999999999999999999999999987632   1  333333222 22333444332       1346889999


Q ss_pred             EcCC----------------------------------CCCCcEEEEEECCC------------------------CCCC
Q 025083           99 ATED----------------------------------DPDGYIFELIQRGP------------------------TPEP  120 (258)
Q Consensus        99 ~v~d----------------------------------DP~G~~iel~~~~~------------------------~~~~  120 (258)
                      .|++                                  ||+|+.|||+....                        ...+
T Consensus        74 ~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  153 (339)
T 3lm4_A           74 RTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKR  153 (339)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSCCCE
T ss_pred             EeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCCcce
Confidence            9986                                  99999999986420                        2467


Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECC-
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD-  199 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d-  199 (258)
                      ++|+.|.|+|++++.+||+++|||++..... +++.....|+..+..  ++.+.+.....    ....+++|++|.|+| 
T Consensus       154 l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~--~~~l~~~~~~~----~~~~~~~Hiaf~v~d~  226 (339)
T 3lm4_A          154 IDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL--GHEVACMRDMT----GGHGKLHHLAFFYGTG  226 (339)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS--SCSEEEEECTT----SCCSEEEEEEEECCCH
T ss_pred             eeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC--ceEEEEeccCC----CCCCceeEEEEEeCCH
Confidence            9999999999999999999999999887754 233345667775543  45566654211    234579999999999 


Q ss_pred             --hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          200 --VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       200 --~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                        +++++++|    +++|+++..+|+++..+..+++||+|||||+|||++..
T Consensus       227 ~~v~~~~~~l----~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          227 QHNIDAVEMF----RDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             HHHHHHHHHH----HHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             HHHHHHHHHH----HHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence              45455555    89999999888766555568899999999999998543

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.97  E-value=7.7e-30  Score=215.37  Aligned_cols=206  Identities=15%  Similarity=0.137  Sum_probs=148.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEecc-CCCCceeEEEEEeecCCCcccCCCCeeeEEEE
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF-GPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~   99 (258)
                      +++++||.|.|+|++++++||+++|||++..+..  .+  . +++.. +.. ....+.+...       ...++.|++|.
T Consensus         6 i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~--~-~~l~~~~~~-~~~~l~l~~~-------~~~~~~h~a~~   72 (309)
T 3hpy_A            6 VLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QG--R-VYFKCWDER-DHSCYIIREA-------DTAGIDFFGFK   72 (309)
T ss_dssp             EEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TS--C-EEEECTTCC-BSCSEEEEEC-------SSCEEEEEEEE
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CC--e-EEEEeccCC-CceEEEEEeC-------CCCceeEEEEE
Confidence            6799999999999999999999999999987632  11  2 33332 221 2223444321       12467889998


Q ss_pred             cCC------------------------------------CCCCcEEEEEECCC----------------------CCCCc
Q 025083          100 TED------------------------------------DPDGYIFELIQRGP----------------------TPEPL  121 (258)
Q Consensus       100 v~d------------------------------------DP~G~~iel~~~~~----------------------~~~~i  121 (258)
                      |++                                    ||+|+.|||+....                      ...+|
T Consensus        73 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i  152 (309)
T 3hpy_A           73 VLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQL  152 (309)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCCSEE
T ss_pred             ECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCccccee
Confidence            875                                    99999999997531                      13568


Q ss_pred             eeeeEEecChhhHHHHHHHhcCCeEeeeecCCc-cceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECCh
Q 025083          122 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  200 (258)
Q Consensus       122 ~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~  200 (258)
                      +|+.|.|+|++++.+||+++|||++......+. +.....|+..+..  ++.+.+...      +...+++|++|.|+|+
T Consensus       153 ~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~Hiaf~v~d~  224 (309)
T 3hpy_A          153 DHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK--VHDIAFVEY------PEKGKLHHCSFLLESW  224 (309)
T ss_dssp             EEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS--SCSEEEEEC------SSTTEEEEEEEECSSH
T ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC--ceeEEEecC------CCCCceeEEEEECCCH
Confidence            999999999999999999999999877654332 2345566765443  344444322      1234699999999997


Q ss_pred             HHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          201 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       201 ~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +++. ++.++++++|+++..+|..+..+..+++||+|||||+|||+..
T Consensus       225 ~~v~-~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          225 EQVL-RAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             HHHH-HHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             HHHH-HHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence            6543 3334559999999888877655556889999999999999876

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.97  E-value=1.5e-29  Score=214.88  Aligned_cols=205  Identities=19%  Similarity=0.228  Sum_probs=150.2

Q ss_pred             cccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeE
Q 025083           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (258)
Q Consensus        17 ~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi   96 (258)
                      +..++++++||.|.|+|++++++||+++|||++..+.   ++  . +++...+......+.+...       ...++.|+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~---~~--~-~~l~~~~~~~~~~l~l~~~-------~~~~~~~~   77 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEED---EN--T-IYLRSLEEFIHHNLVLRQG-------PIAAVAAF   77 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEEC---SS--E-EEEECTTCCSSCSEEEEEC-------SSCEEEEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeec---CC--E-EEEEecCCCCcEEEEEEEC-------CCCCeeEE
Confidence            3456889999999999999999999999999987653   11  2 3343212211234445432       12467889


Q ss_pred             EEEcCC------------------------------------CCCCcEEEEEECCC---------------CCCCceeee
Q 025083           97 AIATED------------------------------------DPDGYIFELIQRGP---------------TPEPLCQVM  125 (258)
Q Consensus        97 a~~v~d------------------------------------DP~G~~iel~~~~~---------------~~~~i~hv~  125 (258)
                      +|.|++                                    ||+|+.|||++...               ...+++|+.
T Consensus        78 ~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~  157 (323)
T 1f1u_A           78 AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHFN  157 (323)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCCCEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecccccccccccccCCCCCCceeeeEE
Confidence            998854                                    99999999996531               235789999


Q ss_pred             EEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHH---
Q 025083          126 LRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK---  202 (258)
Q Consensus       126 l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~---  202 (258)
                      |.|+|++++.+|| ++|||++........+.....|+..+..  ++.+.+...  +     +.+++|++|.|+|+++   
T Consensus       158 l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~--~~~~~~~~~--~-----~~~~~Hiaf~v~d~d~v~~  227 (323)
T 1f1u_A          158 QVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTGG--N-----GPRMHHVAFATHEKHNIIQ  227 (323)
T ss_dssp             EEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEES--S-----BSEEEEEEEECSSHHHHHH
T ss_pred             EecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC--cccEEEeCC--C-----CCCceEEEEECCCHHHHHH
Confidence            9999999999999 9999998876544333345566765432  445555421  1     2389999999999887   


Q ss_pred             HHHHHHHHHHHhCC--eeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          203 SAEVVNLVTQELGG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       203 ~~~~l~~~~~~~G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      ++++|    +++|+  ++..+|+++..+...++||+|||||+||+++.
T Consensus       228 ~~~~l----~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (323)
T 1f1u_A          228 ICDKM----GALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  271 (323)
T ss_dssp             HHHHH----HHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             HHHHH----HHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeC
Confidence            55555    89999  99887777655556789999999999999864

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.97  E-value=5.8e-29  Score=209.69  Aligned_cols=209  Identities=17%  Similarity=0.228  Sum_probs=143.8

Q ss_pred             cccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeE
Q 025083           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (258)
Q Consensus        17 ~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi   96 (258)
                      |++++++++||.|.|+|++++++||+++|||++..+..  .+   .+++..+.....+.+.+...       ...+..|+
T Consensus         1 M~~~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~---~~~l~~~~~~~~~~l~~~~~-------~~~~~~~~   68 (307)
T 1mpy_A            1 MNKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QG---RVYLKAWTEVDKFSLVLREA-------DEPGMDFM   68 (307)
T ss_dssp             CTTSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TS---CEEEECTTCCBSCSEEEEEC-------SSCEEEEE
T ss_pred             CccccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecC--CC---cEEEEecCCCCceEEEEccC-------CCCCcceE
Confidence            45678999999999999999999999999999986532  12   13444332212222333211       12467889


Q ss_pred             EEEcCC------------------------------------CCCCcEEEEEECCC----------------------CC
Q 025083           97 AIATED------------------------------------DPDGYIFELIQRGP----------------------TP  118 (258)
Q Consensus        97 a~~v~d------------------------------------DP~G~~iel~~~~~----------------------~~  118 (258)
                      +|.|++                                    ||+|+.|||++...                      ..
T Consensus        69 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (307)
T 1mpy_A           69 GFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAA  148 (307)
T ss_dssp             EEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCC
T ss_pred             EEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCc
Confidence            999943                                    99999999997421                      23


Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .++.|+.|.|+|++++.+||+++|||++........+.....++..+..  ++.+.+...      +...+.+|++|.|+
T Consensus       149 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~------~~~g~~~hi~f~v~  220 (307)
T 1mpy_A          149 VRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIHH------PEKGRLHHVSFHLE  220 (307)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEEC------SSSSEEEEEEEECS
T ss_pred             CceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC--ceeEEEecC------CCCCcceEEEEEcC
Confidence            4689999999999999999999999998765432222122245554332  233444321      11124899999999


Q ss_pred             ChH---HHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          199 DVY---KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       199 d~~---~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |.+   +++++|    +++|+++..+|..++.+.++++||+|||||+|||++..
T Consensus       221 d~~dv~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  270 (307)
T 1mpy_A          221 TWEDLLRAADLI----SMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  270 (307)
T ss_dssp             CHHHHHHHHHHH----HHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             CHHHHHHHHHHH----HHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecc
Confidence            644   444555    89999998777665433357899999999999999864

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.96  E-value=5.5e-28  Score=202.35  Aligned_cols=204  Identities=14%  Similarity=0.123  Sum_probs=143.4

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      +++++||.|.|+|++++++||+++|||++..+..   +  . +++..+..  ...+.+...       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~--~-~~l~~~~~--~~~l~~~~~-------~~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG---D--A-ALYRADQR--AWRIAVQPG-------ELDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---T--E-EEEESSSB--SCSEEEEEC-------TTCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC---C--e-EEEEcCCc--eEEEEEccC-------CCCCccEEEEEE
Confidence            6899999999999999999999999999986532   1  1 33443322  222333211       124678889988


Q ss_pred             CC--------------------------------------CCCCcEEEEEECCC------------------CCCCceee
Q 025083          101 ED--------------------------------------DPDGYIFELIQRGP------------------TPEPLCQV  124 (258)
Q Consensus       101 ~d--------------------------------------DP~G~~iel~~~~~------------------~~~~i~hv  124 (258)
                      ++                                      ||+|+.|||++...                  ...++.|+
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~hv  146 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHF  146 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBCCGGGCSCEE
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECccccccCCCCCCCCccccccCCcccceE
Confidence            73                                      99999999997642                  11468999


Q ss_pred             eEEecChhhHHHHHHHhcCCeEeeeecCC--cc-ceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChH
Q 025083          125 MLRVGDLGRSIKFYEKALGMKLLRTIDSP--EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  201 (258)
Q Consensus       125 ~l~v~d~~~s~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~  201 (258)
                      .|.|+|++++++||+++|||++......+  .+ .....|+..+..  ++.+.+...      +...+.+|++|.|+|++
T Consensus       147 ~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~d~~  218 (292)
T 1kw3_B          147 VRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAAF------PIPKRIHHFMLQANTID  218 (292)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------SCSSSEEEEEEEBSSHH
T ss_pred             EEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC--cceEEEecC------CCCCceEEEEEEcCCHH
Confidence            99999999999999999999987543211  11 123455554332  334554421      11357899999999976


Q ss_pred             HHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCC-EEEEEcch
Q 025083          202 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW-KTVLVDNE  249 (258)
Q Consensus       202 ~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~-~iel~~~~  249 (258)
                      ++.+.+ ++++ +|+++..+|..++.+..+++||+||||| +|||++..
T Consensus       219 ~v~~~~-~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          219 DVGYAF-DRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             HHHHHH-HHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             HHHHHH-HHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            644333 4448 9999988887665444578899999999 99998764

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.96  E-value=2.8e-28  Score=204.86  Aligned_cols=206  Identities=13%  Similarity=0.119  Sum_probs=144.0

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEee-eeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLR-KRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~   98 (258)
                      ++++++||.|.|+|++++++||+++|||++.. +.   .+   .+++..+..  ...+.+...       ...++.|++|
T Consensus         2 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~---~~~~~~~~~--~~~l~l~~~-------~~~~~~~~~~   66 (300)
T 2zyq_A            2 SIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EG---ALYLRMDDF--PARLVVVPG-------EHDRLLEAGW   66 (300)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SS---CEEEESSSS--SCSEEEEEC-------SSCEEEEEEE
T ss_pred             CcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CC---eEEEEeCCC--cEEEEEecC-------CCCCcceEEE
Confidence            36899999999999999999999999999876 32   11   133443321  223444321       1246678888


Q ss_pred             EcCC--------------------------------------CCCCcEEEEEEC-CC---------------CCCCceee
Q 025083           99 ATED--------------------------------------DPDGYIFELIQR-GP---------------TPEPLCQV  124 (258)
Q Consensus        99 ~v~d--------------------------------------DP~G~~iel~~~-~~---------------~~~~i~hv  124 (258)
                      .|++                                      ||+||.||+++. ..               ...++.|+
T Consensus        67 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~l~hv  146 (300)
T 2zyq_A           67 ECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHV  146 (300)
T ss_dssp             ECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCCGGGCSCEE
T ss_pred             EeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEcCCcCCCCCccCCCcccccCCCccCeE
Confidence            8864                                      999999999987 21               12468999


Q ss_pred             eEEecChhhHHHHHHHhcCCeEeeeecCC--------cc-ceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEE
Q 025083          125 MLRVGDLGRSIKFYEKALGMKLLRTIDSP--------EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  195 (258)
Q Consensus       125 ~l~v~d~~~s~~FY~~~lG~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~  195 (258)
                      .|.|+|++++++||+++|||++......+        .+ .....|+..+..  ++.+.+...      +...+++|++|
T Consensus       147 ~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~g~~h~af  218 (300)
T 2zyq_A          147 VLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPR--HHSLAFLPM------PTSSGIVHLMV  218 (300)
T ss_dssp             EEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSB--SCSEEEESS------CCSSSEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCC--ccEEEEecC------CCCCCceEEEE
Confidence            99999999999999999999987543221        11 123455554332  344555421      12357899999


Q ss_pred             EECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          196 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       196 ~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      .|+|++++. ++.++++++|+++..+|..++.+..+++||+|||||+|||++..
T Consensus       219 ~v~d~~~v~-~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          219 EVEQADDVG-LCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             EBSSHHHHH-HHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             EeCCHHHHH-HHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            999976542 22234499999998877665544468899999999999998754

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.96  E-value=3.7e-28  Score=205.22  Aligned_cols=199  Identities=21%  Similarity=0.317  Sum_probs=145.2

Q ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEE
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~   98 (258)
                      .+++++.|+.|.|+|++++++||+++|||++.....    .  .+++..++......+.+...       ...++.|++|
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~--~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~~~   70 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA----N--NAWFKAQGADEHHVVQLRRA-------DENRIDVIAL   70 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS----S--EEEEECTTSCCSCSEEEEEC-------SSCEEEEEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC----C--eEEEEECCCCCCEEEEEEEC-------CCCCeeEEEE
Confidence            357899999999999999999999999999876531    1  23333322101223444321       1235567777


Q ss_pred             EcCC-------------------------------------CCCCcEEEEEECCC------------CCCCceeeeEEec
Q 025083           99 ATED-------------------------------------DPDGYIFELIQRGP------------TPEPLCQVMLRVG  129 (258)
Q Consensus        99 ~v~d-------------------------------------DP~G~~iel~~~~~------------~~~~i~hv~l~v~  129 (258)
                      .|++                                     ||+|+.|||++...            ...++.|+.|.|+
T Consensus        71 ~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~l~hv~l~v~  150 (310)
T 3b59_A           71 AADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSP  150 (310)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCEEEEEEEEET
T ss_pred             EeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcccccCCCccCCCCCcCcEeceEEEecC
Confidence            7633                                     99999999997642            2467899999999


Q ss_pred             ChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHH---HHH
Q 025083          130 DLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKS---AEV  206 (258)
Q Consensus       130 d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~---~~~  206 (258)
                      |++++.+||+++|||++......     ...|+..+.  .++.+.+...      +  .|++|++|.|+|++++   +++
T Consensus       151 D~~~a~~FY~~~LG~~~~~~~~~-----~~~fl~~~~--~~~~l~l~~~------~--~g~~hi~f~v~d~d~~~~~~~~  215 (310)
T 3b59_A          151 NHQDMVKFFTDVLGFKVSDWLGD-----FMCFLRCNS--AHHRIAILPG------P--PCLNHVAYDMLSVDDMMRGAHR  215 (310)
T ss_dssp             THHHHHHHHHHTSCCEEEEEETT-----TEEEEESSS--BSCSEEEEES------S--SEEEEEEEECSSHHHHHHHHHH
T ss_pred             CHHHHHHHHHhCCCCEEEEeeCC-----eEEEEecCC--CcceEEEECC------C--CceEEEEEEcCCHHHHHHHHHH
Confidence            99999999999999998875421     345566543  2455655421      1  5799999999998766   555


Q ss_pred             HHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          207 VNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       207 l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |    +++|+++..+|+++..+.++++||+|||||.|||++..
T Consensus       216 l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  254 (310)
T 3b59_A          216 L----KVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSEL  254 (310)
T ss_dssp             H----HHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             H----HHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCc
Confidence            5    89999999888776555568899999999999998754

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.96  E-value=1.4e-27  Score=200.35  Aligned_cols=204  Identities=15%  Similarity=0.149  Sum_probs=145.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      +++++||.|.|+|++++++||+++|||++..+..  +    .+++..++.  ...+.+...       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~--~~~l~~~~~-------~~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSR--AWRIAVQQG-------EVDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSB--SCSEEEEEC-------TTCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C----eEEEEeCCC--cEEEEEecC-------CCCCccEEEEEe
Confidence            5789999999999999999999999999987532  1    234443322  222333221       124678899998


Q ss_pred             C---C-----------------------------------CCCCcEEEEEECCCC------------------CCCceee
Q 025083          101 E---D-----------------------------------DPDGYIFELIQRGPT------------------PEPLCQV  124 (258)
Q Consensus       101 ~---d-----------------------------------DP~G~~iel~~~~~~------------------~~~i~hv  124 (258)
                      +   |                                   ||+|+.|||++....                  ..++.|+
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~hv  146 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHF  146 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCBCCGGGCSCEE
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECccccccCCccCCCcccccccCccccceE
Confidence            8   3                                   999999999986521                  2478999


Q ss_pred             eEEecChhhHHHHHHHhcCCeEeeeecCC---ccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChH
Q 025083          125 MLRVGDLGRSIKFYEKALGMKLLRTIDSP---ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVY  201 (258)
Q Consensus       125 ~l~v~d~~~s~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~  201 (258)
                      .|.|+|++++.+||+++|||++......+   +......++..+..  ++.+.+...      +...+.+|++|.|+|++
T Consensus       147 ~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~l~~~------~~~~~~~hiaf~v~d~~  218 (297)
T 1lgt_A          147 VRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNER--HHTLAIAAF------PLPKRIHHFMLEVASLD  218 (297)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------CCSSSEEEEEEEBSCHH
T ss_pred             EEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCC--cceEEEEcC------CCCCCceEEEEeCCCHH
Confidence            99999999999999999999987643211   10123455554332  344555421      12357899999999987


Q ss_pred             HHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          202 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       202 ~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      ++.+.+ ++ +++|+++..+|..++.+...++||+|||||+|||++..
T Consensus       219 ~~~~~~-~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          219 DVGFAF-DR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             HHHHHH-HH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHH-HH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            766444 55 78999998888766544456799999999999998764

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.96  E-value=5.5e-27  Score=195.49  Aligned_cols=208  Identities=19%  Similarity=0.169  Sum_probs=141.3

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCC--CeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEE
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~   98 (258)
                      ...+.|+.|.|+|++++++||+++|||++..... +.+  .+..+...  +   .....+.......+ .......+++|
T Consensus        30 ~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~-~~~~~~~~~~~~~--g---~~~~~l~~~~~~~~-~~~~~~~~~~~  102 (282)
T 3oxh_A           30 QGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPV-PGGGGVYSMATLN--G---EAVAAIAPMPPGAP-EGMPPIWNTYI  102 (282)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEET--T---EEEEEEEECCSCC----CCCEEEEEE
T ss_pred             CCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCC-CCCccCEEEEEeC--C---eeeEeeccCCCCCC-CCCCCcEEEEE
Confidence            4579999999999999999999999999876532 122  34333221  1   11222322211111 11234467888


Q ss_pred             EcCC--------------------------------CCCCcEEEEEECCC--------CCCCceeeeEEecChhhHHHHH
Q 025083           99 ATED--------------------------------DPDGYIFELIQRGP--------TPEPLCQVMLRVGDLGRSIKFY  138 (258)
Q Consensus        99 ~v~d--------------------------------DP~G~~iel~~~~~--------~~~~i~hv~l~v~d~~~s~~FY  138 (258)
                      .|+|                                ||+||.|+|++...        .+.++.|+.|.|+|++++.+||
T Consensus       103 ~v~d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D~~~a~~FY  182 (282)
T 3oxh_A          103 AVDDVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFY  182 (282)
T ss_dssp             ECSCHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSCHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCCHHHHHHHH
Confidence            8888                                99999999998753        2467999999999999999999


Q ss_pred             HHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHHHHHHHHHHHHhCCee
Q 025083          139 EKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  218 (258)
Q Consensus       139 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i  218 (258)
                      +++|||++......+...+  .++..+.   .....+...  .  .....+..|++|.|+|++++++++    +++|+++
T Consensus       183 ~~vlG~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~--~--~~~~~~~~~~~~~v~dvd~~~~~~----~~~G~~~  249 (282)
T 3oxh_A          183 EAVVGLTHSSMEIAAGQNY--RVLKAGD---AEVGGCMEP--P--MPGVPNHWHVYFAVDDADATAAKA----AAAGGQV  249 (282)
T ss_dssp             HHHHCCEEEEC-------C--EEEEETT---EEEEEEECC--S--STTCCSEEEEEEECSCHHHHHHHH----HHTTCEE
T ss_pred             HHHhCCeeeeccCCCCcce--EEEEcCC---ccEeeecCC--C--CCCCCCeEEEEEEeCCHHHHHHHH----HHcCCEE
Confidence            9999999876431122223  2333222   222222211  1  122336678999999999999999    8999999


Q ss_pred             ecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          219 TRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       219 ~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      ..+|...++ ++++++|+|||||.|+|++..
T Consensus       250 ~~~p~~~~~-~~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          250 IAEPADIPS-VGRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             EEEEEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             ecCCeEcCC-CeEEEEEECCCCCEEEEEecC
Confidence            988876654 468999999999999999875

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.96  E-value=5.4e-27  Score=200.38  Aligned_cols=215  Identities=13%  Similarity=0.104  Sum_probs=141.6

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCC-CCeEEEEeccCCCCceeEEEEEeecCCCc-ccCCCCeeeEEE
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLAI   98 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hia~   98 (258)
                      +++++||.|.|+|+++|++||+++|||++.......+ ......++..+.......+.+........ .....++.|++|
T Consensus        28 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hiaf  107 (338)
T 1zsw_A           28 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL  107 (338)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             CccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEEE
Confidence            6899999999999999999999999999886542111 11112222221111223455543221111 112246789999


Q ss_pred             EcCC---------------------------------CCCCcEEEEEECCCC------------------CCCceeeeEE
Q 025083           99 ATED---------------------------------DPDGYIFELIQRGPT------------------PEPLCQVMLR  127 (258)
Q Consensus        99 ~v~d---------------------------------DP~G~~iel~~~~~~------------------~~~i~hv~l~  127 (258)
                      .|++                                 ||||+.|||++....                  ..++.|+.|.
T Consensus       108 ~v~~~~dld~~~~~l~~~G~~~~~~~~~~G~~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~~~~~l~hv~l~  187 (338)
T 1zsw_A          108 LVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELT  187 (338)
T ss_dssp             EESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGGSCCEEEEEEEE
T ss_pred             EcCCHHHHHHHHHHHHHCCCccccccccCCcEEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccccCceEEEEEEE
Confidence            9984                                 999999999986521                  2478999999


Q ss_pred             ecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCc-eeEEEEEEecCCcccccCCceeeEEEEECC---hHHH
Q 025083          128 VGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQ-TTVLELAYSYGVTEYTKGNAYAQVAISTDD---VYKS  203 (258)
Q Consensus       128 v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d---~~~~  203 (258)
                      |+|++++.+||+++|||++.....    ++ ..+ ..+.... ...+.+.. ..+.......+++|++|.|+|   ++++
T Consensus       188 v~Dl~~a~~FY~~~LG~~~~~~~~----~~-~~~-~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~hiaf~v~~~~dv~~~  260 (338)
T 1zsw_A          188 VRRLDKMASTLTEIFGYTEVSRND----QE-AIF-QSIKGEAFGEIVVKYL-DGPTEKPGRGSIHHLAIRVKNDAELAYW  260 (338)
T ss_dssp             ESCHHHHHHHHHHTTCCEEEEECS----SE-EEE-ESSTTCSTTCEEEEEC-CSSBCBCCBTCEEEEEEEESSHHHHHHH
T ss_pred             ECCHHHHHHHHHHhcCCEEEeecC----Ce-EEE-EecCCCCceEEEEecc-CCCCCCCCCCceEEEEEEeCCHHHHHHH
Confidence            999999999999999999877542    12 223 2221111 12333322 111111112468999999994   6666


Q ss_pred             HHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          204 AEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       204 ~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +++|    +++|+++. +|...  ...+.+||+|||||+|||++..
T Consensus       261 ~~~l----~~~G~~~~-~~~~~--~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          261 EEQV----KQRGFHSS-GIIDR--FYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             HHHH----HHTTCCCC-CCEEC--SSEEEEEEECTTCCEEEEEEEE
T ss_pred             HHHH----HHCCCcee-eeeec--CceEEEEEECCCCCEEEEEEcC
Confidence            6666    89999985 55443  3458899999999999999754

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.96  E-value=9.5e-28  Score=202.18  Aligned_cols=205  Identities=13%  Similarity=0.147  Sum_probs=140.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      +++++||.|.|+|++++++||+++|||++....  .+ .  .+++..+..  ...+.+...       ...++.|++|.|
T Consensus         4 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~-~--~~~~~~~~~--~~~l~l~~~-------~~~~~~~~~f~v   69 (305)
T 2wl9_A            4 VTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDG--ED-D--RIYLRMDRW--HHRIVLHAD-------GSDDLAYIGWRV   69 (305)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHTTTTCCEEECCS--CT-T--EEEEECSSB--SCSEEEECS-------SCCEEEEEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHhccCCEEeecc--CC-C--eEEEEeCCC--eEEEEEEEC-------CCCCeEEEEEEE
Confidence            689999999999999999999999999987621  11 1  233443321  223444321       124567888888


Q ss_pred             CC--------------------------------------CCCCcEEEEEEC-CC------------------CCCCcee
Q 025083          101 ED--------------------------------------DPDGYIFELIQR-GP------------------TPEPLCQ  123 (258)
Q Consensus       101 ~d--------------------------------------DP~G~~iel~~~-~~------------------~~~~i~h  123 (258)
                      ++                                      ||+|+.||+++. ..                  ...++.|
T Consensus        70 ~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~h  149 (305)
T 2wl9_A           70 AGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGH  149 (305)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBCCTTTCSCE
T ss_pred             CCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCcccceecCCceeee
Confidence            63                                      999999999876 20                  1247899


Q ss_pred             eeEEecChhhHHHHHHHhcCCeEeeeecCC--cc-ceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECCh
Q 025083          124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSP--EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  200 (258)
Q Consensus       124 v~l~v~d~~~s~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~  200 (258)
                      +.|.|+|+++|.+|| ++|||++......+  .+ .....|+..+..  ++.+.+...      ....+++|++|.|+|+
T Consensus       150 v~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~d~  220 (305)
T 2wl9_A          150 IIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDR--HHSLAFGVG------PMDKRINHLMIEYTHL  220 (305)
T ss_dssp             EEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSS--SCSEEECCS------CCSSSEEEEEEEESSH
T ss_pred             EEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCC--ceEEEEecC------CCCCCceEEEEEcCCH
Confidence            999999999999999 99999986542211  11 123455554332  333444311      1235789999999995


Q ss_pred             HHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          201 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       201 ~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +++. ++.++++++|+++..+|..+..+..+++||+|||||+|||++..
T Consensus       221 ~~v~-~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          221 DDLG-YAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             HHHH-HHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             HHHH-HHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            4422 23344499999998887666544457899999999999998764

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.96  E-value=1.1e-27  Score=201.58  Aligned_cols=206  Identities=14%  Similarity=0.118  Sum_probs=140.2

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~   99 (258)
                      ++++++||.|.|+|++++++||+++|||++..+..  .+   ..|+..+.  ....+.+...       ...++.|++|.
T Consensus         6 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~---~~~~~~~~--~~~~l~l~~~-------~~~~~~~~~~~   71 (302)
T 2ehz_A            6 AVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KD---RFYLRMDY--WHHRIVVHHN-------GQDDLEYLGWR   71 (302)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--SS---EEEEESSS--BSCSEEEESS-------CCSEEEEEEEE
T ss_pred             cccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--Cc---ceEEEeCC--CceEEEEecC-------CCCCeeEEEEE
Confidence            36899999999999999999999999999876421  11   23333321  1222333221       12356777777


Q ss_pred             cCC--------------------------------------CCCCcEEEEEECCC----C---------------CCCce
Q 025083          100 TED--------------------------------------DPDGYIFELIQRGP----T---------------PEPLC  122 (258)
Q Consensus       100 v~d--------------------------------------DP~G~~iel~~~~~----~---------------~~~i~  122 (258)
                      |++                                      ||+|+.|||++...    .               ..++.
T Consensus        72 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  151 (302)
T 2ehz_A           72 VAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGLG  151 (302)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSCBCCGGGCSC
T ss_pred             ECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccceecCCCccc
Confidence            753                                      99999999997521    0               12789


Q ss_pred             eeeEEecChhhHHHHHHHhcCCeEeeeecCC--cc-ceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECC
Q 025083          123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--EL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  199 (258)
Q Consensus       123 hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  199 (258)
                      |+.|.|+|++++.+|| ++|||++......+  .+ .....|+..+..  ++.+.+...      +...+++|++|.|+|
T Consensus       152 hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~d  222 (302)
T 2ehz_A          152 HCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR--DHSIAFGAM------PAAKRLNHLMLEYTH  222 (302)
T ss_dssp             EEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB--SCSEEECSC------CCSSSEEEEEEEESS
T ss_pred             eEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC--CcEEEEecC------CCCCceeEEEEEcCC
Confidence            9999999999999999 99999976532211  11 123455554332  333444211      113578999999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          200 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       200 ~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      ++++.+ +.++++++|+++..+|..++.+..+++||+|||||.|||+...
T Consensus       223 ~~~v~~-~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          223 MEDLGY-THQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             HHHHHH-HHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             HHHHHH-HHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            765433 2244589999998887766544457899999999999998763

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.94  E-value=3.1e-25  Score=190.89  Aligned_cols=218  Identities=17%  Similarity=0.229  Sum_probs=153.8

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc------ccCCCCe
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS------YDIGTGF   93 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~   93 (258)
                      .+++++||.+.|+|++++++||+++|||+++.+....++  ..+++..+    ...+.+..+.....      ...+.++
T Consensus         2 ~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~g~g~   75 (357)
T 2r5v_A            2 QNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQG----QVTLVLTEPTSDRHPAAAYLQTHGDGV   75 (357)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEET----TEEEEEEEESSTTSHHHHHHHHHSSEE
T ss_pred             CCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeC----CEEEEEeCCCCCCCHHHHHHHhcCCeE
Confidence            378999999999999999999999999999876543333  23333322    24566765422211      1235689


Q ss_pred             eeEEEEcCC---------------------------------CCCCcEEEEEECCC-----------------------C
Q 025083           94 GHLAIATED---------------------------------DPDGYIFELIQRGP-----------------------T  117 (258)
Q Consensus        94 ~hia~~v~d---------------------------------DP~G~~iel~~~~~-----------------------~  117 (258)
                      .|+||.|+|                                 ||+|..++|+++..                       .
T Consensus        76 ~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~~~~~  155 (357)
T 2r5v_A           76 ADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDVD  155 (357)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEECSCCCCTTCTTCC
T ss_pred             EEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCcccCcccccCCCCCC
Confidence            999999999                                 78899999987520                       1


Q ss_pred             CCCceeeeEEec--ChhhHHHHHHHhcCCeEeeeec--CCccceeEEEeeecCCCceeEEEEEEecCC---cc---c---
Q 025083          118 PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTID--SPELKCALAMLGYAEEDQTTVLELAYSYGV---TE---Y---  184 (258)
Q Consensus       118 ~~~i~hv~l~v~--d~~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~---~---  184 (258)
                      ..+++|++|.|+  |++++.+||+++|||++.....  .+..+....++..+.  ....+.|......   .+   +   
T Consensus       156 ~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~--g~~~l~l~~~~~~~~~~~~~~~~~~  233 (357)
T 2r5v_A          156 LLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS--GAVTLTLIEPDRNADPGQIDEFLKD  233 (357)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT--SCCEEEEEEECTTSBCCHHHHHHHH
T ss_pred             cceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC--CCEEEEEeeecCCCCCchhHHHHHh
Confidence            246899999999  9999999999999999875431  222233455565433  2456777654321   10   1   


Q ss_pred             ccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCC---------CCC-------eeEEEEECCCCCEEEEEcc
Q 025083          185 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP---------GLN-------TKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       185 ~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~---------~~~-------~~~~~~~DPdG~~iel~~~  248 (258)
                      ..+.|++||+|.|+|+++++++|    +++|+++...|....         .+.       .+++|++||||++|+|++.
T Consensus       234 ~~~~g~~Hiaf~v~Di~~~~~~L----~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          234 HQGAGVQHIAFNSNDAVRAVKAL----SERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HTSSEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             cCCCCccEEEEEcCCHHHHHHHH----HHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence            13568999999999999999999    899999887762210         000       1379999999999999985


Q ss_pred             h
Q 025083          249 E  249 (258)
Q Consensus       249 ~  249 (258)
                      .
T Consensus       310 ~  310 (357)
T 2r5v_A          310 S  310 (357)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.93  E-value=2.2e-23  Score=180.60  Aligned_cols=221  Identities=18%  Similarity=0.235  Sum_probs=154.8

Q ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCC--CeEEEEeccCCCCceeEEEEEeecCCCcc---------
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVTSY---------   87 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~~---------   87 (258)
                      ..+++++||.|.|+|++++++||+++|||+++.+...+.+  ....+++..+    ...++|..+......         
T Consensus        18 ~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~   93 (381)
T 1t47_A           18 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHV   93 (381)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHH
T ss_pred             CcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHHH
Confidence            4478999999999999999999999999999876322112  2344555533    256777765322211         


Q ss_pred             -cCCCCeeeEEEEcCC-----------------------------------CCCCcEEEEEECC-------C--------
Q 025083           88 -DIGTGFGHLAIATED-----------------------------------DPDGYIFELIQRG-------P--------  116 (258)
Q Consensus        88 -~~~~~~~hia~~v~d-----------------------------------DP~G~~iel~~~~-------~--------  116 (258)
                       +.+.++.|+||.|+|                                   ||+|+.++|+++.       +        
T Consensus        94 ~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~~~~~  173 (381)
T 1t47_A           94 AEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPI  173 (381)
T ss_dssp             HHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSSTTCEECCCS
T ss_pred             HhcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCCCCcccccc
Confidence             225689999999998                                   8899999998752       0        


Q ss_pred             -------CCCCceeeeEEec--ChhhHHHHHHHhcCCeEeeeec-----CCccceeEEEeeecCCCceeEEEEEEecC--
Q 025083          117 -------TPEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTID-----SPELKCALAMLGYAEEDQTTVLELAYSYG--  180 (258)
Q Consensus       117 -------~~~~i~hv~l~v~--d~~~s~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--  180 (258)
                             ...+|+|+++.|+  |++++.+||+++|||+......     .+.......++..+.  ....+.|.....  
T Consensus       174 ~~~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~--g~v~i~l~~~~~~~  251 (381)
T 1t47_A          174 VEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT--LKVKFPINEPALAK  251 (381)
T ss_dssp             SCCCSSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT--SCSEEEEEEECCSS
T ss_pred             ccCCCCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCC--CcEEEEEecCCcCC
Confidence                   1246899999999  9999999999999999876532     222233444454332  234566655431  


Q ss_pred             Ccc-------cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCC---------CC-------eeEEEEEC
Q 025083          181 VTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPG---------LN-------TKITSFVD  237 (258)
Q Consensus       181 ~~~-------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~---------~~-------~~~~~~~D  237 (258)
                      ...       ...+.|++||||.|+|+.+++++|    +++|+++...|...-.         +.       ..+++-+|
T Consensus       252 ~~s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L----~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d  327 (381)
T 1t47_A          252 KKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRD  327 (381)
T ss_dssp             SCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEEC
T ss_pred             CccHHHHHHHHhCCCCcceEEEecCCHHHHHHHH----HHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeC
Confidence            110       124668999999999999999999    8999999877643211         00       12577799


Q ss_pred             CCCCEEEEEcch
Q 025083          238 PDGWKTVLVDNE  249 (258)
Q Consensus       238 PdG~~iel~~~~  249 (258)
                      |+|..+.|++..
T Consensus       328 ~~g~llqift~~  339 (381)
T 1t47_A          328 EDGYLLQIFTKP  339 (381)
T ss_dssp             SSCEEEEEEBCC
T ss_pred             CCCeEEEEeccC
Confidence            999988888654

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.88  E-value=6.3e-21  Score=166.83  Aligned_cols=196  Identities=17%  Similarity=0.268  Sum_probs=135.9

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCC--CCeEEEEeccCCCCceeEEEEEeecCCC-------------
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE--EKYSNAFLGFGPEQSYFVVELTYNYGVT-------------   85 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~~-------------   85 (258)
                      +++++||.|.|+|+++|++||+++|||+++.+...+.  ..+..+++..+    ...++|..+....             
T Consensus        23 i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~~~~~~~~p   98 (424)
T 1sqd_A           23 VKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTTTAS   98 (424)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGCCCS
T ss_pred             CCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCcccccccccccccc
Confidence            6799999999999999999999999999887643221  23444555432    2466676552211             


Q ss_pred             ------c------ccCCCCeeeEEEEcCC--------------------------------CCCCcEEEEEECCCC----
Q 025083           86 ------S------YDIGTGFGHLAIATED--------------------------------DPDGYIFELIQRGPT----  117 (258)
Q Consensus        86 ------~------~~~~~~~~hia~~v~d--------------------------------DP~G~~iel~~~~~~----  117 (258)
                            .      .+.+.|+.|+||.|+|                                +|+|+.++++++...    
T Consensus        99 ~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~~g~~~~~  178 (424)
T 1sqd_A           99 IPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTEK  178 (424)
T ss_dssp             STTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECCC----
T ss_pred             cccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEecCCCCCCc
Confidence                  0      1224689999999999                                356888888864310    


Q ss_pred             ---------------------CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCc-----cceeEEEeeecCCCcee
Q 025083          118 ---------------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----LKCALAMLGYAEEDQTT  171 (258)
Q Consensus       118 ---------------------~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  171 (258)
                                           ..+|+|+++.|+|++++.+||+++|||++......++     .++...++..+..  ..
T Consensus       179 ~~f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g--~~  256 (424)
T 1sqd_A          179 SEFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDE--MV  256 (424)
T ss_dssp             --CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTS--CS
T ss_pred             cccCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCC--cE
Confidence                                 1368999999999999999999999999887653322     2344445554332  45


Q ss_pred             EEEEEEec----CCc---cc---ccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCC
Q 025083          172 VLELAYSY----GVT---EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  222 (258)
Q Consensus       172 ~l~l~~~~----~~~---~~---~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p  222 (258)
                      .+.|....    ...   .+   ..|.|++||||.|+|+.+++++|++++..+|+++...|
T Consensus       257 ~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          257 LLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             EEEEEEECCC---CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             EEEEecccccCCCcchhhhhhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            66666552    111   11   24679999999999999999999433233899998765

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.87  E-value=3.8e-21  Score=165.28  Aligned_cols=220  Identities=15%  Similarity=0.120  Sum_probs=146.0

Q ss_pred             hhccCcccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc----c
Q 025083           12 ELLEWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS----Y   87 (258)
Q Consensus        12 ~~~~~~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~   87 (258)
                      +|+. +...+++++||.+.|+|++++++|| ++|||+++.+...  .  ..+++..+    ...+.+........    .
T Consensus         2 ~~~~-~~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~--~--~~~l~~~g----~~~l~l~~~~~~~~~~~~~   71 (357)
T 1cjx_A            2 DLYE-NPMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRS--K--NVHLYRQG----EINLILNNEPNSIASYFAA   71 (357)
T ss_dssp             --CC-CTTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESS--S--SEEEEEET----TEEEEEECCSSSHHHHHHH
T ss_pred             cccc-CCcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCC--e--eEEEEecC----CEEEEEECCCCchhhhhhh
Confidence            4444 3344899999999999999999999 7999999876431  1  22333322    23455543221110    1


Q ss_pred             cCCCCeeeEEEEcCC-------------------------------CCCCcEEEEEECCC--------------------
Q 025083           88 DIGTGFGHLAIATED-------------------------------DPDGYIFELIQRGP--------------------  116 (258)
Q Consensus        88 ~~~~~~~hia~~v~d-------------------------------DP~G~~iel~~~~~--------------------  116 (258)
                      ..+.++.|+||.|+|                               +|+|..++++++..                    
T Consensus        72 ~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~~~~~~~~~~~f~~~~~~~~~~  151 (357)
T 1cjx_A           72 EHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRFGEGSSIYDIDFVYLEGVERNP  151 (357)
T ss_dssp             HHSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCCSSSCCHHHHHEEECTTCCSSC
T ss_pred             hcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCCCCCCCcCCCCcccCCccccCC
Confidence            235789999999998                               56788888886531                    


Q ss_pred             ---CCCCceeeeEEec--ChhhHHHHHHHhcCCeEeeeecCCc--cce--eEEEeeecCCCceeEEEEEEe-cCC-cc--
Q 025083          117 ---TPEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPE--LKC--ALAMLGYAEEDQTTVLELAYS-YGV-TE--  183 (258)
Q Consensus       117 ---~~~~i~hv~l~v~--d~~~s~~FY~~~lG~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~l~l~~~-~~~-~~--  183 (258)
                         ...+|+|+++.|+  |++++.+||+++|||+.........  .+.  ..+++..    ....++|... ... .+  
T Consensus       152 ~~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~----g~~~i~L~~~~~~~~~~~~  227 (357)
T 1cjx_A          152 VGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD----GMIRIPLNEESSKGAGQIE  227 (357)
T ss_dssp             CTTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT----SSCEEEEEEECTTCCSHHH
T ss_pred             CCCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC----CCEEEEEeeecCCCCChHH
Confidence               0135789999999  9999999999999999876543211  112  2223222    2456777654 221 11  


Q ss_pred             ----cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeec-CCcc--------CCCCCe--------eEEEEEC----C
Q 025083          184 ----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR-QPGP--------IPGLNT--------KITSFVD----P  238 (258)
Q Consensus       184 ----~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~-~p~~--------~~~~~~--------~~~~~~D----P  238 (258)
                          ...+.|++||+|.|+|+++++++|    +++|+++.. .|..        ....+.        .+++-+|    |
T Consensus       228 ~~~~~~~g~g~~HiAf~v~Di~~~~~~L----~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~  303 (357)
T 1cjx_A          228 EFLMQFNGEGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGD  303 (357)
T ss_dssp             HHHHHHTSSBCCEEEEEESCHHHHHHHH----HHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTE
T ss_pred             HhHHhcCCCCeeEEEEEcCCHHHHHHHH----HHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCC
Confidence                124568999999999999999988    899999877 5511        111011        2467788    8


Q ss_pred             CCCEEEEEcch
Q 025083          239 DGWKTVLVDNE  249 (258)
Q Consensus       239 dG~~iel~~~~  249 (258)
                      +|++++|++..
T Consensus       304 ~g~llqift~~  314 (357)
T 1cjx_A          304 KRLLLQIFSET  314 (357)
T ss_dssp             EEEEEEEEBCC
T ss_pred             CCeEEEEeccC
Confidence            89999988754

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.87  E-value=4.9e-21  Score=141.30  Aligned_cols=129  Identities=47%  Similarity=0.818  Sum_probs=97.5

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      +++.|+.|.|+|++++.+||+++|||++......+++.+..+++..+.......++|...........+.+..|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            36899999999999999999999999988765434344556667654322246677765543322334558889999999


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                      |+++++++|    +++|+++..+|...+.+..+++||+|||||.|||++....
T Consensus        81 d~~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           81 NAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             CHHHHHHHH----HHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            999999999    8999999887766655444688999999999999987643

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.87  E-value=2.4e-20  Score=160.86  Aligned_cols=194  Identities=17%  Similarity=0.259  Sum_probs=138.7

Q ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCC--eEEEEeccCCCCceeEEEEEeecCCCc-------ccC
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEK--YSNAFLGFGPEQSYFVVELTYNYGVTS-------YDI   89 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~~-------~~~   89 (258)
                      ..+++++||++.|+|++++++||+++|||+++.....+.+.  ...+++..+    ...++|..+.....       .+.
T Consensus         7 ~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G----~i~~~L~~p~~p~s~~~a~fl~~h   82 (393)
T 3isq_A            7 GRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG----KIVFVLSSALNPWNKEMGDHLVKH   82 (393)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHHHH
T ss_pred             CCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC----CEEEEEecCCCCCchHHHHHHHhc
Confidence            34799999999999999999999999999988754433221  223444432    35677776543221       124


Q ss_pred             CCCeeeEEEEcCC-----------------------------------CCCCcEEEEEECC-------C----C------
Q 025083           90 GTGFGHLAIATED-----------------------------------DPDGYIFELIQRG-------P----T------  117 (258)
Q Consensus        90 ~~~~~hia~~v~d-----------------------------------DP~G~~iel~~~~-------~----~------  117 (258)
                      +.|+.|+||.|+|                                   +|.|..+.|+++.       +    .      
T Consensus        83 G~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~~~~~~~~~  162 (393)
T 3isq_A           83 GDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPL  162 (393)
T ss_dssp             CSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCBSCSCCCTT
T ss_pred             CCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCcccccccccc
Confidence            6789999999999                                   6778888888642       0    0      


Q ss_pred             --------CCCceeeeEEecC--hhhHHHHHHHhcCCeEeeeec-----CCccceeEEEeeecCCCceeEEEEEEecC--
Q 025083          118 --------PEPLCQVMLRVGD--LGRSIKFYEKALGMKLLRTID-----SPELKCALAMLGYAEEDQTTVLELAYSYG--  180 (258)
Q Consensus       118 --------~~~i~hv~l~v~d--~~~s~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~l~~~~~--  180 (258)
                              ..+|+|+++.|+|  ++++.+||+++|||+.....+     .+..+.....+..+.  ....+.|.....  
T Consensus       163 ~~~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~--g~v~i~L~ep~~~~  240 (393)
T 3isq_A          163 LPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPINEPAPGK  240 (393)
T ss_dssp             GGGSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTT--SSCEEEEEEEECCS
T ss_pred             ccCCCCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCC--CCEEEEEecCCCCC
Confidence                    1358999999998  999999999999999876543     122334444554333  246677765532  


Q ss_pred             C-cc------cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCC
Q 025083          181 V-TE------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  222 (258)
Q Consensus       181 ~-~~------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p  222 (258)
                      . .+      ...|.|++||||.|+|+.+.+++|    +++|+++...|
T Consensus       241 ~~s~I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l----~~~Gv~~l~~P  285 (393)
T 3isq_A          241 KKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHL----RERGLEFLSVP  285 (393)
T ss_dssp             BCCHHHHHHHHHTSSEEEEEEEEESCHHHHHHHH----HHTTCCBCCCC
T ss_pred             CCCHHHHHHHHcCCCCcceEEEEcCCHHHHHHHH----HHcCCccCCCC
Confidence            1 11      124779999999999999999999    89999988765

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.87  E-value=1.8e-20  Score=163.61  Aligned_cols=192  Identities=15%  Similarity=0.205  Sum_probs=136.1

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCC--CeEEEEeccCCCCceeEEEEEeecCCC-------------
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVT-------------   85 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~-------------   85 (258)
                      +++++||.|.|+|++++++||++.|||+++.+...+.+  ....+++..+    ...++|..+....             
T Consensus        29 i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G----~~~l~L~~~~~~~~~~~~~p~~~~~~  104 (418)
T 1sp8_A           29 TLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATAALPSFSA  104 (418)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGCSSTTCCH
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC----CEEEEEecCCCCcccccccccccccc
Confidence            68999999999999999999999999998876433222  3455556543    2457776653220             


Q ss_pred             c------ccCCCCeeeEEEEcCC--------------------------------CCCCcEEEEEECCCC----------
Q 025083           86 S------YDIGTGFGHLAIATED--------------------------------DPDGYIFELIQRGPT----------  117 (258)
Q Consensus        86 ~------~~~~~~~~hia~~v~d--------------------------------DP~G~~iel~~~~~~----------  117 (258)
                      .      .+.+.|+.|+||.|+|                                +|.|..+.++++...          
T Consensus       105 ~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd~~~~~~~~~f~p~~  184 (418)
T 1sp8_A          105 AAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDGAAGEPFLPGF  184 (418)
T ss_dssp             HHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCTTGGGSSSSTTC
T ss_pred             hhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEccCCCCCCcccCCCC
Confidence            0      1234689999999999                                346777888765410          


Q ss_pred             ------------CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCc-----cceeEEEeeecCCCceeEEEEEEecC
Q 025083          118 ------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----LKCALAMLGYAEEDQTTVLELAYSYG  180 (258)
Q Consensus       118 ------------~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~~~  180 (258)
                                  ..+|+|+++.|+|++++.+||+++|||++......++     .+....++..+..  ...+.+.....
T Consensus       185 ~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g--~i~l~l~e~~~  262 (418)
T 1sp8_A          185 EGVASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLNEPVH  262 (418)
T ss_dssp             EECCCTTCCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEEEECC
T ss_pred             cccCCCCCCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCC--cEEEEEeeccc
Confidence                        1367999999999999999999999999887653322     1234455654432  45666665421


Q ss_pred             ----Cc---cc---ccCCceeeEEEEECChHHHHHHHHHHHHH----hCCeeecCC
Q 025083          181 ----VT---EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQE----LGGKITRQP  222 (258)
Q Consensus       181 ----~~---~~---~~~~g~~hi~~~v~d~~~~~~~l~~~~~~----~G~~i~~~p  222 (258)
                          ..   .+   ..+.|++||||.|+|+.+++++|    ++    +|+++...|
T Consensus       263 ~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L----~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          263 GTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREM----QARSAMGGFEFMAPP  314 (418)
T ss_dssp             CSSSCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHH----HTSGGGTSCCBCCCC
T ss_pred             ccCCCcchhhhhhccCCCCcCEEEEEeCCHHHHHHHH----hhhhccCCeEEccCC
Confidence                11   11   24679999999999999999999    77    799998765

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.84  E-value=1e-20  Score=143.62  Aligned_cols=125  Identities=17%  Similarity=0.142  Sum_probs=88.9

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc-----cccCCcee
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-----YTKGNAYA  191 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~~~~g~~  191 (258)
                      ..++|.|++|.|+|+++|++||+++|||++.......+  .....+..........+.+.....+..     ...+.+..
T Consensus        23 ~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~  100 (155)
T 4g6x_A           23 NAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIP  100 (155)
T ss_dssp             CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCC
T ss_pred             CceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCce
Confidence            45689999999999999999999999999876544332  233333322222223332222221111     11234788


Q ss_pred             eEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          192 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       192 hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |++|.|+|+++++++|    +++|+++..+|...++  ++++||+|||||+|||+|..
T Consensus       101 ~l~f~VdDvda~~~~l----~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          101 AASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             SEEEEESCHHHHHHHH----HHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             EEEeeechhhhhhhHH----hcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            9999999999999999    8999999988876554  48899999999999999864

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.83  E-value=1.2e-19  Score=132.40  Aligned_cols=120  Identities=20%  Similarity=0.232  Sum_probs=91.8

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc--cccCCceeeEEEE
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE--YTKGNAYAQVAIS  196 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~g~~hi~~~  196 (258)
                      +++.|+.|.|+|++++.+||+++|||+.......++.++..+++..++   ...+.|.......+  ...+.|..|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            578999999999999999999999999887654444455666676543   45677766543322  1245578999999


Q ss_pred             ECC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEE
Q 025083          197 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  246 (258)
Q Consensus       197 v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  246 (258)
                      |+|   ++++++++    +++|+++..+|...+. +.+.+||+|||||+|||+
T Consensus        79 v~d~~~v~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKL----RQDGFAIAGEPRMTGD-GYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHH----HHcCCeEecCcccCCC-CcEEEEEECCCCCEEEEe
Confidence            999   66777777    8999999887765443 357899999999999997

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.83  E-value=1.9e-19  Score=140.66  Aligned_cols=129  Identities=30%  Similarity=0.561  Sum_probs=99.7

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCc---------------eeEEEEEEecCC
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQ---------------TTVLELAYSYGV  181 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~l~~~~~~  181 (258)
                      ...+++|+.|.|+|++++++||+++|||++..+...+.+++.+++++.+....               ...++|......
T Consensus        31 ~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  110 (187)
T 3vw9_A           31 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGT  110 (187)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTG
T ss_pred             ceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCC
Confidence            34789999999999999999999999999988766555667778877543210               256777655432


Q ss_pred             c-----ccccC----CceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          182 T-----EYTKG----NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       182 ~-----~~~~~----~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                      .     ++..+    .|++|++|.|+|+++++++|    +++|+++..+|...+.  ++++||+|||||.|||++....
T Consensus       111 ~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l----~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~  183 (187)
T 3vw9_A          111 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKM  183 (187)
T ss_dssp             GGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGGS
T ss_pred             CCCCccccccCCCCCCceeEEEEEECCHHHHHHHH----HHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEcccc
Confidence            2     11122    38899999999999999999    8999999987765433  3578999999999999998754

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.82  E-value=9.9e-20  Score=134.12  Aligned_cols=124  Identities=15%  Similarity=0.153  Sum_probs=92.3

Q ss_pred             CCCCCceeeeEEecChhhHHHHHHHhcCCeEeeee-cCCccceeEEEeeecCCCceeEEEEEEecCCccc-----ccCCc
Q 025083          116 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTI-DSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY-----TKGNA  189 (258)
Q Consensus       116 ~~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-----~~~~g  189 (258)
                      .|..+++|++|.|+|+++|++||+ +|||+..... ..+..+...+++..+    ...++|.........     ..+.|
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~g   77 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGST   77 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSCE
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCCc
Confidence            356789999999999999999999 9999986542 222334556666653    356777654332111     11568


Q ss_pred             eeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccC-CCCCeeEEEEECCCCCEEEEEcc
Q 025083          190 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI-PGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       190 ~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~-~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      ++|++|.|+|+++++++|    +++|+++..+|.+. ...+.+++|++|||||+|||+++
T Consensus        78 ~~hiaf~v~di~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           78 PYHICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEEEESCHHHHHHHH----TTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             eEEEEEEcCCHHHHHHHH----HHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            999999999999999999    89999998765332 12245889999999999999874

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.82  E-value=1.3e-19  Score=133.10  Aligned_cols=123  Identities=18%  Similarity=0.249  Sum_probs=91.2

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCccc-------ccCCce
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY-------TKGNAY  190 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-------~~~~g~  190 (258)
                      ..++.|+.|.|+|++++.+||+++|||+.......++.+...+++..+    ...++|.........       ..+.++
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~g~   78 (134)
T 3rmu_A            3 LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG----NTKMELLHPLGLDSPIAGFLQKNKAGGM   78 (134)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS----SSEEEEEEECSTTCTTHHHHHHCTTCEE
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC----CEEEEEEecCCCCchhhhhhhccCCCCc
Confidence            457999999999999999999999999988765444444566677654    345666554332111       234588


Q ss_pred             eeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEE--ECCCCCEEEEEcc
Q 025083          191 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF--VDPDGWKTVLVDN  248 (258)
Q Consensus       191 ~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~--~DPdG~~iel~~~  248 (258)
                      .|++|.|+|+++++++|    +++|+++..+|......+.+++|+  +|||||.|||++.
T Consensus        79 ~hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           79 HHICIEVDNINAAVMDL----KKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEEESCHHHHHHHH----HHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             eEEEEEcCCHHHHHHHH----HHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            99999999999999999    899999877654433334456666  8999999999873

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.82  E-value=4.7e-19  Score=132.50  Aligned_cols=124  Identities=41%  Similarity=0.664  Sum_probs=93.0

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.|+.|.|+|++++.+||+++|||++......+++.+..+++..+.......+.|...........+.+..|++|.|
T Consensus         6 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v   85 (144)
T 2c21_A            6 SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGV   85 (144)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEE
T ss_pred             cceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEe
Confidence            46799999999999999999999999998876543333455566765432124667776654322233456889999999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      +|+++++++|    +++|+++..+     ++...++||+|||||.|||++...
T Consensus        86 ~d~~~~~~~l----~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~~  129 (144)
T 2c21_A           86 EDVKELVADM----RKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEKT  129 (144)
T ss_dssp             SCHHHHHHHH----HHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHHH
T ss_pred             CCHHHHHHHH----HHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcCc
Confidence            9999999988    8999998764     222234599999999999998764

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.82  E-value=5.3e-19  Score=129.74  Aligned_cols=121  Identities=23%  Similarity=0.291  Sum_probs=91.0

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEe-------cCCcc---cc-c
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYS-------YGVTE---YT-K  186 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-------~~~~~---~~-~  186 (258)
                      ..+++|+.|.|+|++++.+||+++|||++..+...++.....+++..+    ...++|..+       .....   .+ .
T Consensus         3 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~   78 (134)
T 3l7t_A            3 LKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDSNYCAPPERISWPRE   78 (134)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET----TEEEEEEECCTTSTTCCCCCCCCCSSSC
T ss_pred             eeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC----CeEEEEEecccccccccCCccccCCCCC
Confidence            357999999999999999999999999998765444333345556644    346666652       11111   12 4


Q ss_pred             CCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          187 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       187 ~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      +.+..|++|.|+|+++++++|    +++|+++...|....+ +.+.+||+|||||.|||++
T Consensus        79 ~~g~~~~~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           79 ACGLRHLAFYVEDVEASRQEL----IALGIRVEEVRYDDYT-GKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             CSEEEEEEEECSCHHHHHHHH----HHHTCCCCCCEECTTS-CCEEEEEECTTCCEEEEEC
T ss_pred             CCCeEEEEEEECCHHHHHHHH----HhCCCcccceeccCCC-ceEEEEEECCCCCEEEEeC
Confidence            558899999999999999999    8999998766554333 4589999999999999985

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.81  E-value=7.1e-19  Score=129.15  Aligned_cols=125  Identities=20%  Similarity=0.277  Sum_probs=92.2

Q ss_pred             CCCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEE
Q 025083          116 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  195 (258)
Q Consensus       116 ~~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~  195 (258)
                      .+..++.|+.|.|+|++++.+||+++|||++......+. +...+.+..+.  ....+.+.............+..|++|
T Consensus         9 ~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~   85 (133)
T 4hc5_A            9 LMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPG--AQTQVALGLPSWYEDGRKPGGYTGISL   85 (133)
T ss_dssp             CSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTT--CSCEEEEECGGGCSSCCCSCEEEEEEE
T ss_pred             ccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCC--CceEEEEecCcccccccCCCCeEEEEE
Confidence            356789999999999999999999999999887653222 12334444322  245566654331111122347889999


Q ss_pred             EECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          196 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       196 ~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      .|+|+++++++|    +++|+++..+|...++ +.++++|+|||||.|||++.
T Consensus        86 ~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           86 ITRDIDEAYKTL----TERGVTFTKPPEMMPW-GQRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             EESCHHHHHHHH----HHTTCEESSSCEECTT-SCEEEEEECTTCEEEEEEEC
T ss_pred             EeCCHHHHHHHH----HHCCCEeecCCCcCCC-CCEEEEEECCCCCEEEEEeC
Confidence            999999999999    8999999988876665 34899999999999999863

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.79  E-value=1.8e-18  Score=125.75  Aligned_cols=121  Identities=21%  Similarity=0.257  Sum_probs=87.0

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc---cccCCceeeEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE---YTKGNAYAQVA  194 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~g~~hi~  194 (258)
                      ..++.|+.|.|+|++++.+||+++|||++......++.....+++..++   . .+.|........   ...+.+..|++
T Consensus         3 ~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~-~l~l~~~~~~~~~~~~~~~~g~~~~~   78 (126)
T 2p25_A            3 FKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGS---Q-ELEIFISDQFPARPSYPEALGLRHLA   78 (126)
T ss_dssp             TSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETT---E-EEEEEECTTCCCCCCSSCCSSCCCEE
T ss_pred             ccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCC---e-EEEEEeccCCCCCCCCCCCccceEEE
Confidence            4679999999999999999999999999876532222222223344432   2 566665332111   12345788999


Q ss_pred             EEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          195 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       195 ~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      |.|+|+++++++|    +++|+++...|..... +.+.+||+|||||.|||++
T Consensus        79 ~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           79 FKVEHIEEVIAFL----NEQGIETEPLRVDDFT-GKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EECSCHHHHHHHH----HHTTCCCCCCEECTTT-CCEEEEEECTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHH----HHcCCccccccccCCC-CcEEEEEECCCCCEEEeeC
Confidence            9999999999988    8999998765543333 3578999999999999975

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.79  E-value=8.9e-19  Score=133.66  Aligned_cols=124  Identities=19%  Similarity=0.298  Sum_probs=94.0

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc-c-----ccCCcee
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-Y-----TKGNAYA  191 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~-----~~~~g~~  191 (258)
                      ..++.||+|.|+|+++|++||+++|||++......++.+...+++..+    ...++|........ .     ..+.|+.
T Consensus         6 ~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~   81 (161)
T 3oa4_A            6 SNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG----ESKIELLEPLSEESPIAKFIQKRGEGIH   81 (161)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET----TEEEEEEEESSTTSHHHHHHHHHCSEEE
T ss_pred             cCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC----CeEEEEEeECCCCChHHHHhhcCCCCeE
Confidence            468999999999999999999999999988765444445567777654    35677765533221 1     2356899


Q ss_pred             eEEEEECChHHHHHHHHHHHHHhCCeeecC-CccCCCCCeeEEEE--ECCCCCEEEEEcchh
Q 025083          192 QVAISTDDVYKSAEVVNLVTQELGGKITRQ-PGPIPGLNTKITSF--VDPDGWKTVLVDNED  250 (258)
Q Consensus       192 hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~-p~~~~~~~~~~~~~--~DPdG~~iel~~~~~  250 (258)
                      |++|.|+|+++++++|    +++|+++..+ |....+ +.+++|+  +|||||.|||++...
T Consensus        82 Hiaf~V~Did~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           82 HIAIGVKSIEERIQEV----KENGVQMINDEPVPGAR-GAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EEEEECSCHHHHHHHH----HHTTCCBSCSSCEECGG-GCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             EEEEEECCHHHHHHHH----HHCCCEecccCcccCCC-CcEEEEEeccCCCeEEEEEEecCC
Confidence            9999999999999999    8999999776 443222 3467777  499999999998753

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.78  E-value=4.6e-18  Score=132.43  Aligned_cols=130  Identities=29%  Similarity=0.551  Sum_probs=95.8

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCC---------------CceeEEEEEEecCCc
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE---------------DQTTVLELAYSYGVT  182 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~  182 (258)
                      ..++.|+.|.|+|++++.+||+++|||++......++..+..++++.+..               .....++|.......
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~  108 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTE  108 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGG
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCC
Confidence            56899999999999999999999999998876533333455566654320               013567776543211


Q ss_pred             --c---cc----cCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhhhH
Q 025083          183 --E---YT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  253 (258)
Q Consensus       183 --~---~~----~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  253 (258)
                        +   +.    ...++.|++|.|+|+++++++|    +++|+++..+|...++  ++++||+|||||.|||++...+++
T Consensus       109 ~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l----~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~~~  182 (184)
T 2za0_A          109 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKIAT  182 (184)
T ss_dssp             GCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGGG
T ss_pred             CCcccccccCCCCCCCeeEEEEEeCCHHHHHHHH----HHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCcccc
Confidence              0   11    1247889999999999999999    8999999887765332  367899999999999999877653

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.78  E-value=5.5e-18  Score=127.46  Aligned_cols=124  Identities=15%  Similarity=0.201  Sum_probs=90.8

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecC-----------CccceeEEEeeecCCCceeEEEEEEecCCcc---
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDS-----------PELKCALAMLGYAEEDQTTVLELAYSYGVTE---  183 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---  183 (258)
                      ..++.|+.|.|+|++++.+||++ |||++......           +..+...+++..++.  +..++|.....+..   
T Consensus         9 ~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g--~~~l~l~~~~~~~~~~~   85 (153)
T 1ss4_A            9 LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIAD   85 (153)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCB
T ss_pred             ccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCC--CcEEEEEEecCCCCccc
Confidence            35789999999999999999999 99998765321           112344566665432  35566654311110   


Q ss_pred             ----cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          184 ----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       184 ----~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                          ...+.|++|++|.|+|+++++++|    +++|+++..+|...++ +.+++||+|||||.|||++..
T Consensus        86 ~~~~~~~~~g~~hl~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           86 HRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEEC
T ss_pred             ccCCCCCCCceEEEEEEeCCHHHHHHHH----HHCCCeecCCCcccCC-ceEEEEEECCCCCEEEEEecc
Confidence                123457889999999999999999    8999999887755443 468899999999999999864

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.77  E-value=4.1e-18  Score=126.08  Aligned_cols=119  Identities=20%  Similarity=0.180  Sum_probs=87.7

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCc--cc-ccCCceeeEEE
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--EY-TKGNAYAQVAI  195 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~-~~~~g~~hi~~  195 (258)
                      .++.|+.|.|+|++++.+||+++|||++.......++.+..+++. +    ...+.|.......  +. ..+.+..|++|
T Consensus         4 ~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h~~f   78 (136)
T 2rk0_A            4 SGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDHLSF   78 (136)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEEEEE
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcceEEE
Confidence            468999999999999999999999999887654333335555555 2    4567776553321  11 23457899999


Q ss_pred             EE---CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          196 ST---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       196 ~v---~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      .|   +|+++++++|    +++|+++. +|...+.  ++.+||+|||||+|||++..
T Consensus        79 ~v~~~~d~~~~~~~l----~~~G~~~~-~~~~~~~--g~~~~~~DPdG~~iel~~~~  128 (136)
T 2rk0_A           79 SVESMTDLDVLEERL----AKAGAAFT-PTQELPF--GWILAFRDADNIALEAMLGR  128 (136)
T ss_dssp             EESSHHHHHHHHHHH----HHHTCCBC-CCEEETT--EEEEEEECTTCCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHH----HHCCCccc-CccccCC--ceEEEEECCCCCEEEEEEcC
Confidence            99   7777777777    89999986 3433333  38899999999999999764

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.77  E-value=5e-18  Score=126.99  Aligned_cols=128  Identities=16%  Similarity=0.206  Sum_probs=92.2

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCC--CceeEEEEEEecCCc-c-----cccC-
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEE--DQTTVLELAYSYGVT-E-----YTKG-  187 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~l~~~~~~~-~-----~~~~-  187 (258)
                      +..++.|+.|.|+|++++.+||+++|||++......++.+...+++..++.  ..+..++|....... +     ...+ 
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~   85 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNG   85 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTT
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCC
Confidence            457899999999999999999999999998776433333345566665431  112567776654321 1     1233 


Q ss_pred             -CceeeEEEEECChHHHHHHHHHHHHHhCCeee-cCCccCCCCCeeEEEE--ECCCCCEEEEEcch
Q 025083          188 -NAYAQVAISTDDVYKSAEVVNLVTQELGGKIT-RQPGPIPGLNTKITSF--VDPDGWKTVLVDNE  249 (258)
Q Consensus       188 -~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~-~~p~~~~~~~~~~~~~--~DPdG~~iel~~~~  249 (258)
                       .++.|++|.|+|+++++++|    +++|+++. .+|....+ +.+++|+  +|||||.|||++..
T Consensus        86 ~~g~~h~~~~v~d~~~~~~~l----~~~G~~~~~~~p~~~~~-g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           86 RAGLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTG-GNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             CCEEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSS-SCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCceEEEEEECCCHHHHHHHH----HHCCCeecCcCcccCCC-ceEEEEEeecCCCcEEEEEEecC
Confidence             57899999999999999999    89999987 34543222 3466677  99999999999764

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.77  E-value=2.2e-18  Score=131.04  Aligned_cols=121  Identities=16%  Similarity=0.192  Sum_probs=91.9

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCC--------------ccceeEEEeeecCCCceeEEEEEEecCCc
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--------------ELKCALAMLGYAEEDQTTVLELAYSYGVT  182 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  182 (258)
                      ...+|+||+|.|+|++++++||+++|||++..+...+              ..+..++++..+    ...++|.......
T Consensus        16 ~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~~~~~~~   91 (159)
T 3gm5_A           16 DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELIEPDENP   91 (159)
T ss_dssp             CGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEEEECSSS
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEEEECCCC
Confidence            4578999999999999999999999999976543322              123456666653    3567776653321


Q ss_pred             c-c-----ccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCC--CCEEEEEcc
Q 025083          183 E-Y-----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD--GWKTVLVDN  248 (258)
Q Consensus       183 ~-~-----~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPd--G~~iel~~~  248 (258)
                      . .     ..+.|++||+|.|+|+++++++|    +++|+++..++. ..  +.+++||+|||  |+.|||+++
T Consensus        92 ~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l----~~~G~~~~~~~~-~~--g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           92 STWREFLDKNGEGIHHIAFVVKDMDRKVEEL----YRKGMKVIQKGD-FE--GGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             CHHHHHHHHHCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEE-ET--TEEEEEESCHHHHSSEEEEEEE
T ss_pred             ChhHHHhhcCCceEEEEEEEcCCHHHHHHHH----HHCCCcEeeccc-cC--CeeEEEEeccccCcEEEEEEec
Confidence            1 1     13668999999999999999999    899999876542 22  46899999999  999999985

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.77  E-value=3.6e-18  Score=128.79  Aligned_cols=125  Identities=21%  Similarity=0.232  Sum_probs=90.4

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCc------cceeEEEeeecCCCceeEEEEEEecCCcc-----cc
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE------LKCALAMLGYAEEDQTTVLELAYSYGVTE-----YT  185 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~  185 (258)
                      +..+|.||.|.|+|++++.+||+++|||++......+.      ..-..+++..++   ...+.|.......+     ..
T Consensus        16 ~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~   92 (156)
T 3kol_A           16 NLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPD---GTILDLFGEPELSPPDPNPEK   92 (156)
T ss_dssp             SSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTT---SCEEEEEECTTCCCSSSSTTC
T ss_pred             ccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCC---CCEEEEEecCCCCcCCCCCCC
Confidence            35689999999999999999999999999876322110      001234455433   35566665433211     12


Q ss_pred             cCCceeeEEEEEC--ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          186 KGNAYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       186 ~~~g~~hi~~~v~--d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      ...+..|++|.|+  |+++++++|    +++|+++..+|....+  ++.+||+|||||.|||++...
T Consensus        93 ~~~~~~h~~~~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           93 TFTRAYHLAFDIDPQLFDRAVTVI----GENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CCSSCCEEEEECCGGGHHHHHHHH----HHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             CCCceEEEEEEecHHHHHHHHHHH----HHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            3458899999998  899888888    8999999877766543  369999999999999998753

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.76  E-value=7e-18  Score=123.79  Aligned_cols=118  Identities=23%  Similarity=0.241  Sum_probs=87.0

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCc---ccccCCceeeEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT---EYTKGNAYAQVA  194 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~g~~hi~  194 (258)
                      ..++.|+.|.|+|++++.+||+++|||++.....    +  .+++..+    ...+.+.......   ......+..|++
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~   77 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA----G--RIALEFG----HQKINLHQLGNEFEPKAQNVRVGSADLC   77 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----T--EEEEEET----TEEEEEEETTSCCSSCCTTCCTTCCEEE
T ss_pred             ecccCEEEEEECCHHHHHHHHHHccCceEEEecC----C--eEEEEcC----CEEEEEEcCCCCccccCCCCCCCccEEE
Confidence            4589999999999999999999999999887631    1  2334433    2445554432211   112345789999


Q ss_pred             EEECC-hHHHHHHHHHHHHHhCCeeecCCccCCCC--CeeEEEEECCCCCEEEEEcch
Q 025083          195 ISTDD-VYKSAEVVNLVTQELGGKITRQPGPIPGL--NTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       195 ~~v~d-~~~~~~~l~~~~~~~G~~i~~~p~~~~~~--~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |.|+| +++++++|    +++|+++..+|...++.  ..+.+||+|||||.|||++..
T Consensus        78 ~~v~dd~~~~~~~l----~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           78 FITDTVLSDAMKHV----EDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             EECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             EEeCcHHHHHHHHH----HHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            99997 99999988    89999998776544332  237899999999999999874

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.76  E-value=1e-17  Score=123.32  Aligned_cols=115  Identities=11%  Similarity=0.041  Sum_probs=84.6

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.|+.|.|+|++++++||+++|||++.....    .+.  .+..++   ...+.|.....+. .....+..|++|.|
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~~---~~~l~l~~~~~~~-~~~~~~~~~~~~~v   80 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYV--AFPSSG---DALFAIWSGGEEP-VAEIPRFSEIGIML   80 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEE--EEECST---TCEEEEESSSCCC-CTTSCCCEEEEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEE--EEEcCC---CcEEEEEeCCCCC-cCCCCCcceEEEEe
Confidence            4689999999999999999999999999876532    122  233222   3455554332111 12234788999999


Q ss_pred             CC---hHHHHHHHHHHHHH---hCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          198 DD---VYKSAEVVNLVTQE---LGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~d---~~~~~~~l~~~~~~---~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +|   +++++++|    ++   +|+++..+|...+.+  +.++|+|||||+|||++.
T Consensus        81 ~~~~dv~~~~~~l----~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           81 PTGEDVDKLFNEW----TKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SSHHHHHHHHHHH----HHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHH----HhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence            87   77777777    89   999999888766543  889999999999999875

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.76  E-value=1.2e-17  Score=124.46  Aligned_cols=114  Identities=15%  Similarity=0.200  Sum_probs=85.1

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      +..++.||.|.|+|++++.+||+++|||++......  .  ...++..+.  ....+.|....      ...+..|++|.
T Consensus        25 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--~--~~~~~~~~~--~~~~l~l~~~~------~~~~~~h~~~~   92 (141)
T 3ghj_A           25 NIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSA--R--RWNFLWVSG--RAGMVVLQEEK------ENWQQQHFSFR   92 (141)
T ss_dssp             -CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETT--T--TEEEEEETT--TTEEEEEEECC------SSCCCCEEEEE
T ss_pred             eeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCC--C--cEEEEEecC--CCcEEEEeccC------CCCCCceEEEE
Confidence            356899999999999999999999999998876532  1  233444333  24567665431      12467899999


Q ss_pred             EC--ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          197 TD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       197 v~--d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      |+  |+++++++|    +++|+++. +|.....++++.+||+|||||.|||++
T Consensus        93 v~~~dld~~~~~l----~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           93 VEKSEIEPLKKAL----ESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             ECGGGHHHHHHHH----HHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EeHHHHHHHHHHH----HHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            97  888888888    89999988 443333445689999999999999985

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.75  E-value=1.4e-17  Score=123.70  Aligned_cols=124  Identities=17%  Similarity=0.280  Sum_probs=86.3

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      +.....|+.|.|+|+++|++||+++|||++..+... .+++..++++.+..  ...+++.......+...+.+..|++|.
T Consensus         8 m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~hi~~~   84 (139)
T 1twu_A            8 FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVFY   84 (139)
T ss_dssp             CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEEE
T ss_pred             CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC--ceEEEEeecCCCCCCCCCCCccEEEEE
Confidence            345678899999999999999999999998765432 22355666765432  345676654432223344578899999


Q ss_pred             ECCh---HHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          197 TDDV---YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       197 v~d~---~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |+|+   ++++++|    +++|+++..++.+.....+ . ||+|||||.|||++..
T Consensus        85 v~d~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~g-~-~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           85 VPNAVELAAITSKL----KHMGYQEVESENPYWSNGG-V-TIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCCHHHHHHHHHHH----HHTTCCEECCSSHHHHSSE-E-EEECTTCCEEEEESSC
T ss_pred             eCCcchHHHHHHHH----HHcCCcCcCCCCcccCCCC-e-EEECCCCCEEEEEEcC
Confidence            9998   7777777    8999998732221111112 2 6999999999999863

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.74  E-value=2.2e-17  Score=124.41  Aligned_cols=119  Identities=18%  Similarity=0.228  Sum_probs=86.4

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCC---cccccCCceeeEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV---TEYTKGNAYAQVA  194 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~g~~hi~  194 (258)
                      ..++.|+.|.|+|++++++||+++|||++.....    +  .+++..+    ...+.|......   .......+..|++
T Consensus        21 i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~----~--~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~g~~hi~   90 (152)
T 3huh_A           21 IDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ----N--RKALIFG----AQKINLHQQEMEFEPKASRPTPGSADLC   90 (152)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT----T--EEEEEET----TEEEEEEETTBCCSSCCSSCCTTCCEEE
T ss_pred             cceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC----C--eEEEEeC----CeEEEEeccCCcCCCcCcCCCCCccEEE
Confidence            4579999999999999999999999999887631    1  2334433    234555433211   1112345789999


Q ss_pred             EEEC-ChHHHHHHHHHHHHHhCCeeecCCccCCCCC--eeEEEEECCCCCEEEEEcchh
Q 025083          195 ISTD-DVYKSAEVVNLVTQELGGKITRQPGPIPGLN--TKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       195 ~~v~-d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~  250 (258)
                      |.+. |+++++++|    +++|+++..+|...+++.  .+.+||+|||||+|||++...
T Consensus        91 f~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           91 FITSTPINDVVSEI----LQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             EEESSCHHHHHHHH----HHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             EEecCCHHHHHHHH----HHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            9997 999999999    899999988775443322  478999999999999998753

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.73  E-value=3e-17  Score=118.28  Aligned_cols=113  Identities=19%  Similarity=0.122  Sum_probs=82.0

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc-cccCCceeeEEEEE
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAIST  197 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~~v  197 (258)
                      .++.|+.|.|+|++++.+||+++|||++.....    +  .+++..++    ..+.+.... ..+ ...+.+ .|++|.|
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~~----~~l~l~~~~-~~~~~~~~~~-~~~~~~v   71 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGS----HCLMLSQNH-LVPLENFQSG-IIIHIEV   71 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETT----EEEEEESSC-SSSCCCCCSC-EEEEEEC
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----C--EEEEEeCC----eEEEEEcCC-CCCcccCCCe-EEEEEEE
Confidence            578999999999999999999999999875321    1  23344332    233332211 111 122234 4799999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +|+++++++|    +++|+++..+|...+. +.+.++|+|||||.|||++.
T Consensus        72 ~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           72 EDVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             SCHHHHHHHH----HHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             CCHHHHHHHH----HHCCCceecCCccccC-ccEEEEEECCCccEEEEEec
Confidence            9999999999    8999999887766554 35888999999999999874

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.73  E-value=2.8e-17  Score=123.63  Aligned_cols=118  Identities=14%  Similarity=0.094  Sum_probs=82.4

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc-cccCCceeeEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAIS  196 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~~  196 (258)
                      ..++.|+.|.|+|++++++||+++|||++.....    +  .+++..++   ...+.+.......+ .....+..|++|.
T Consensus         4 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~--~~~~~~~~---g~~l~l~~~~~~~~~~~~~~~~~~l~f~   74 (148)
T 3rhe_A            4 LSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----T--FAMFVMKT---GLRLGLWAQEEIEPKAHQTGGGMELSFQ   74 (148)
T ss_dssp             ---CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----S--EEEEECTT---SCEEEEEEGGGCSSCCC----CEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----C--EEEEEcCC---CcEEEEecCCcCCccccCCCCeEEEEEE
Confidence            4579999999999999999999999999876532    1  23444322   34555543322111 1223467889999


Q ss_pred             ECC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          197 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       197 v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      |+|   +++++++|    +++|+++..+|...+.  ++.++|+|||||+|||++...
T Consensus        75 v~d~~dvd~~~~~l----~~~G~~i~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~  125 (148)
T 3rhe_A           75 VNSNEMVDEIHRQW----SDKEISIIQPPTQMDF--GYTFVGVDPDEHRLRIFCLKR  125 (148)
T ss_dssp             CSCHHHHHHHHHHH----HHTTCCEEEEEEEETT--EEEEEEECTTCCEEEEEEEC-
T ss_pred             cCCHHHHHHHHHHH----HhCCCEEEeCCeecCC--CcEEEEECCCCCEEEEEEcCh
Confidence            988   66666666    8999999888776655  388999999999999997753

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.73  E-value=1.1e-16  Score=118.36  Aligned_cols=119  Identities=16%  Similarity=0.093  Sum_probs=86.7

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc-cccC-CceeeEEEEEC
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKG-NAYAQVAISTD  198 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~-~g~~hi~~~v~  198 (258)
                      ..++.|.|+|++++++||+++|||++..+...+ +....+.+..+    ...+.|........ ...+ .++.|++|.|+
T Consensus         3 ~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~   77 (137)
T 3itw_A            3 HMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG----GGIVMVRRTGEPYTVSCAGGHTCKQVIVWVS   77 (137)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS----SSEEEEEETTCCSSCEECCCCCCCEEEEEES
T ss_pred             eEEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC----CeEEEEEecCCCcCccCCCCCcEEEEEEEeC
Confidence            457999999999999999999999998765433 33334445433    23455543221111 1122 23449999999


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |+++++++|    +++|+++..+|...++ +.+.++|+|||||.|||++..
T Consensus        78 dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           78 DVDEHFMRS----TAAGADIVQPLQDKPW-GLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEEETT-TEEEEEEECSSSCEEEEEECC
T ss_pred             CHHHHHHHH----HHcCCeeccCccccCC-CcEEEEEECCCCCEEEEEEEc
Confidence            999999999    8999999888766554 458999999999999999875

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.73  E-value=6.7e-17  Score=118.81  Aligned_cols=117  Identities=15%  Similarity=0.192  Sum_probs=84.2

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCcccee---EEEeeecCCCceeEEEEEEecCCcccccCCceeeEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCA---LAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVA  194 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  194 (258)
                      ..++.|+.|.|+|++++.+||+++|||++......  ..+.   ..++..+    ...+.+.....    ....+..|++
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~----~~~l~l~~~~~----~~~~~~~h~~   71 (133)
T 2p7o_A            2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGD--KTFSLSKEKFFLIA----GLWICIMEGDS----LQERTYNHIA   71 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET----TEEEEEEECSS----CCCCCSCEEE
T ss_pred             CceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCC--cccccCCceEEEeC----CEEEEEecCCC----CCCCCeeEEE
Confidence            46799999999999999999999999998764321  1111   0134432    24566654321    1145788999


Q ss_pred             EEEC--ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          195 ISTD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       195 ~~v~--d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |.|+  |++++++++    +++|+++..+|...++ +++.+||+|||||.|||++..
T Consensus        72 ~~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           72 FQIQSEEVDEYTERI----KALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             EECCGGGHHHHHHHH----HHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSS
T ss_pred             EEcCHHHHHHHHHHH----HHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCC
Confidence            9995  888888888    8999999887654433 458899999999999999875

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.73  E-value=5.4e-17  Score=119.00  Aligned_cols=118  Identities=15%  Similarity=0.212  Sum_probs=80.8

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ...|.|+.|.|+|++++++||++ |||++...... .+.+  +.+...+   ...+.|.....  ......+..|++|.|
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~~--~~~~~~~---~~~l~l~~~~~--~~~~~~~~~~l~f~v   74 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KGSE--VHRAVHN---GVEFSLYSIQN--PQRSQIPSLQLGFQI   74 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CC--EEEEEET---TEEEEEEECCC--CSSCCCCSEEEEEEE
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CCCE--EEEEeCC---CeEEEEEECCC--CcCCCCCceEEEEEe
Confidence            34689999999999999999999 99998765211 1122  2232111   33455532221  112233567899999


Q ss_pred             CChHHHHHHHHHHHHHhCCe-eecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          198 DDVYKSAEVVNLVTQELGGK-ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~-i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      +|++++++++    +++|++ +..+|...++ +.+ ++|+|||||+|+|.+...
T Consensus        75 ~dvd~~~~~l----~~~G~~~~~~~p~~~~~-G~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           75 TDLEKTVQEL----VKIPGAMCILDPTDMPD-GKK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             SCHHHHHHHH----TTSTTCEEEEEEEECC--CEE-EEEECTTCCEEEEEC---
T ss_pred             CCHHHHHHHH----HHCCCceeccCceeCCC-ccE-EEEECCCCCEEEEEEecc
Confidence            9999999999    899999 8777766554 334 999999999999998764

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.72  E-value=4.3e-17  Score=121.00  Aligned_cols=116  Identities=20%  Similarity=0.250  Sum_probs=83.2

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeE---EEeeecCCCceeEEEEEEecCCcccccCCceeeEEE
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCAL---AMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  195 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~  195 (258)
                      .++.|+.|.|+|++++.+||+++|||++......  ..+..   .++..+    ...+.+......   + ..+..|++|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g----~~~l~l~~~~~~---~-~~~~~h~~~   72 (139)
T 1r9c_A            3 EGLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIG----DIWVAIMQGEKL---A-ERSYNHIAF   72 (139)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEET----TEEEEEEECCCC---S-SCCSCEEEE
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEEC----CEEEEEEeCCCC---C-CCCeeEEEE
Confidence            4689999999999999999999999998765321  11110   134432    245666543211   1 357889999


Q ss_pred             EEC--ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          196 STD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       196 ~v~--d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      .|+  |+++++++|    +++|+++..+|...++ +++.+||+|||||.|||++..
T Consensus        73 ~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           73 KIDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             ECCGGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             EcCHHHHHHHHHHH----HHCCCcccCCcccCCC-CeEEEEEECCCCCEEEEEeCC
Confidence            999  888888888    8999998876544432 458899999999999999865

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.72  E-value=7.7e-17  Score=117.47  Aligned_cols=116  Identities=11%  Similarity=0.098  Sum_probs=85.1

Q ss_pred             CCCceeeeEEe--cChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEE
Q 025083          118 PEPLCQVMLRV--GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  195 (258)
Q Consensus       118 ~~~i~hv~l~v--~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~  195 (258)
                      ..++.|+.|.|  +|++++.+||+++|||++..+...... ....++..+    ...+.|.....    ....+..|++|
T Consensus         8 ~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~----~~~l~l~~~~~----~~~~~~~~~~f   78 (126)
T 2qqz_A            8 IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKK-RGGCWFKCG----NQEIHIGVEQN----FNPAKRAHPAF   78 (126)
T ss_dssp             EEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGG-GCCEEEEET----TEEEEEEECTT----CCCCSSSCEEE
T ss_pred             cceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccC-CCceEEEeC----CEEEEEEecCC----CCCCCceEEEE
Confidence            34799999999  899999999999999998765321100 112344443    23455554321    11247889999


Q ss_pred             EECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          196 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       196 ~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      .|+|+++++++|    +++|+++..+|. . . +.+.+||+|||||.|||+++.
T Consensus        79 ~v~d~~~~~~~l----~~~G~~~~~~~~-~-~-g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           79 YVLKIDEFKQEL----IKQGIEVIDDHA-R-P-DVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EETTHHHHHHHH----HHTTCCCEEECS-S-T-TEEEEEEECTTSCEEEEEEEC
T ss_pred             EcCCHHHHHHHH----HHcCCCccCCCC-C-C-CeeEEEEECCCCCEEEEEeCC
Confidence            999999999999    899999887763 2 2 368899999999999999753

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.72  E-value=3.6e-17  Score=122.46  Aligned_cols=114  Identities=24%  Similarity=0.309  Sum_probs=83.6

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECC
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  199 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  199 (258)
                      ++. +.|.|+|++++++||+++|||++..+...++.++.+.+++      .  +.+.... . ......+..|++|.|+|
T Consensus         7 ~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~------~--~~l~~~~-~-~~~~~~~~~hl~f~V~d   75 (144)
T 3r6a_A            7 QIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS------T--ILLIAGS-E-EALKPFRNTQATFLVDS   75 (144)
T ss_dssp             EEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET------T--EEEEESC-H-HHHGGGGGCCEEEEESC
T ss_pred             EEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec------c--EEEecCC-c-ccCCCCcceEEEEEeCC
Confidence            344 8999999999999999999999877654333334443332      1  3333221 1 11122356899999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          200 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       200 ~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      +++++++|    +++|+++..+|...++  ++.+||+|||||.|||++...
T Consensus        76 ~d~~~~~l----~~~G~~v~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~  120 (144)
T 3r6a_A           76 LDKFKTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVIEYVEHSK  120 (144)
T ss_dssp             HHHHHHHH----HHTTCEEEEEEEEETT--EEEEEEECTTSCEEEEEEECC
T ss_pred             HHHHHHHH----HHcCCEEecCCccCCC--ceEEEEECCCCCEEEEEEcCC
Confidence            99999999    8999999888766555  388999999999999998764

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.72  E-value=5.9e-17  Score=121.93  Aligned_cols=120  Identities=20%  Similarity=0.238  Sum_probs=88.6

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCc-----ccccCCceee
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT-----EYTKGNAYAQ  192 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~g~~h  192 (258)
                      ..++.|+.|.|+|++++.+||+++|||++....  +    ..+++..+    ...+.|.......     +...+.+..|
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~----~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~   72 (150)
T 3bqx_A            3 LQQVAVITLGIGDLEASARFYGEGFGWAPVFRN--P----EIIFYQMN----GFVLATWLVQNLQEDVGVAVTSRPGSMA   72 (150)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC--S----SEEEEECS----SSEEEEEEHHHHHHHHSSCCCSSCCSCE
T ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC--C----CEEEEEcC----CEEEEEEeccccccccCCCCCCCCCeEE
Confidence            457999999999999999999999999987653  1    23444432    3456665432110     1112457789


Q ss_pred             EEEEE---CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhhh
Q 025083          193 VAIST---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  252 (258)
Q Consensus       193 i~~~v---~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  252 (258)
                      ++|.|   +|+++++++|    +++|+++..+|...+. +.+.+||+|||||.|||++...++
T Consensus        73 l~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~~  130 (150)
T 3bqx_A           73 LAHNVRAETEVAPLMERL----VAAGGQLLRPADAPPH-GGLRGYVADPDGHIWEIAFNPVWP  130 (150)
T ss_dssp             EEEECSSGGGHHHHHHHH----HHTTCEEEEEEECCTT-SSEEEEEECTTCCEEEEEECTTSC
T ss_pred             EEEEeCCHHHHHHHHHHH----HHCCCEEecCCcccCC-CCEEEEEECCCCCEEEEEeCCCce
Confidence            99999   7888888888    8999999888766554 358999999999999999876543

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.72  E-value=4.2e-17  Score=124.22  Aligned_cols=120  Identities=13%  Similarity=0.170  Sum_probs=85.8

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCC--------cccccCCc
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV--------TEYTKGNA  189 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--------~~~~~~~g  189 (258)
                      ..++.|+.|.|+|++++++||+++|||++......     ..+++..+.    ..+.+......        .+...+.|
T Consensus         6 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~~g   76 (160)
T 3r4q_A            6 PSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGR----QMLLLFDPQESSRADANNPIPRHGAVG   76 (160)
T ss_dssp             CSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETT----EEEEEECHHHHTCCCTTCCSCCCEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCC----EEEEEEecCCccCccccCCCCcCCCcc
Confidence            46899999999999999999999999998876532     234444332    33444322111        01112347


Q ss_pred             eeeEEEEE---CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhhh
Q 025083          190 YAQVAIST---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  252 (258)
Q Consensus       190 ~~hi~~~v---~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  252 (258)
                      +.|++|.|   +|+++++++|    +++|+++..++.. ++ +++.+||+|||||+|||++...+.
T Consensus        77 ~~hi~f~V~~~~dld~~~~~l----~~~G~~~~~~~~~-~~-g~~~~~~~DPdG~~iel~~~~~~~  136 (160)
T 3r4q_A           77 QGHFCFYADDKAEVDEWKTRF----EALEIPVEHYHRW-PN-GSYSVYIRDPAGNSVEVGEGKLWG  136 (160)
T ss_dssp             ECEEEEEESSHHHHHHHHHHH----HTTTCCCCEEEEC-TT-SCEEEEEECTTCCEEEEEEGGGGT
T ss_pred             eeEEEEEeCCHHHHHHHHHHH----HHCCCEEeccccc-cC-CcEEEEEECCCCCEEEEEeCCCCC
Confidence            79999999   7777777777    8999998755432 22 468999999999999999987654

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.72  E-value=4.6e-17  Score=121.85  Aligned_cols=116  Identities=16%  Similarity=0.139  Sum_probs=84.3

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCccc-ccCCceeeEEEEE
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY-TKGNAYAQVAIST  197 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~g~~hi~~~v  197 (258)
                      .++.|+.|.|+|++++.+||+++|||++.....    ++  +++..++   ...+.|.......+. ..+.+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSP----TF--SLFVLAN---GMKLGLWSRHTVEPKASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET----TE--EEEECTT---SCEEEEEETTSCSSCCCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCC----Ce--EEEEcCC---CcEEEEEeCCCCCCccCCCCCceEEEEEe
Confidence            489999999999999999999999999876541    22  3344332   345666543221111 2235788999999


Q ss_pred             CC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          198 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       198 ~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +|   +++++++|    +++|+++..+|...++  ++.+||+|||||.|||++..
T Consensus        95 ~d~~dv~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           95 ENDAQVDETFAGW----KASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             CCHHHHHHHHHHH----HHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            85   56666666    8999999887766544  38899999999999999753

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.72  E-value=1.6e-16  Score=118.22  Aligned_cols=115  Identities=23%  Similarity=0.297  Sum_probs=84.7

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc-cccCCceeeEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAIS  196 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~~  196 (258)
                      ..++.|+.|.|+|++++.+||+++|||++......      ..++..+    ...+.|.......+ .....+..|++|.
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~------~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~hi~~~   71 (141)
T 1npb_A            2 LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCG----DLWVCLSYDEARQYVPPQESDYTHYAFT   71 (141)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT------EEEEEET----TEEEEEEECTTCCCCCGGGSCSCEEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHhccCCEEEeecCC------cEEEEEC----CEEEEEEECCCCCCCCCCCCCceEEEEE
Confidence            46799999999999999999999999998775421      1344433    23455554322111 1223478899999


Q ss_pred             EC--ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          197 TD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       197 v~--d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      |+  |+++++++|    +++|+++..+|..    .++.+||+|||||.|||++...
T Consensus        72 v~~~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  119 (141)
T 1npb_A           72 VAEEDFEPLSQRL----EQAGVTIWKQNKS----EGASFYFLDPDGHKLELHVGSL  119 (141)
T ss_dssp             CCHHHHHHHHHHH----HHTTCCEEECCCS----SSEEEEEECTTCCEEEEEECCH
T ss_pred             eCHHHHHHHHHHH----HHCCCeEeccCCC----ceeEEEEECCCCCEEEEEECch
Confidence            96  788888887    8999999876532    3488999999999999998763

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.71  E-value=2.1e-16  Score=116.71  Aligned_cols=112  Identities=25%  Similarity=0.263  Sum_probs=83.6

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .++.|+.|.|+|++++.+||+++|||++.....  .    ..++..+    ...+.+......  .....+..|++|.|+
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~----~~~l~l~~~~~~--~~~~~~~~h~~~~v~   70 (135)
T 1nki_A            3 TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELG----SLWLCLSREPQY--GGPAADYTHYAFGIA   70 (135)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEET----TEEEEEEECTTC--CCCCSSSCEEEEEEC
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecC----CEEEEEEeCCCC--CCCCCCcceEEEEcc
Confidence            468999999999999999999999999876542  1    1334433    234555543211  123347889999997


Q ss_pred             --ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          199 --DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       199 --d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                        |++++++++    +++|+++..+|..    +++.+||+|||||.|||++...
T Consensus        71 ~~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           71 AADFARFAAQL----RAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             HHHHHHHHHHH----HHTTCCEEECCCS----SSCEEEEECTTCCEEEEESCCH
T ss_pred             HHHHHHHHHHH----HHCCCceecCCCC----CeEEEEEECCCCCEEEEEECCc
Confidence              788888777    8999999876542    3478999999999999998764

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.71  E-value=2.3e-16  Score=116.26  Aligned_cols=119  Identities=16%  Similarity=0.092  Sum_probs=82.3

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..+++|+.|.|+|++++++||+++|||++.....    .  .+.+..++   . .+.+....... .+...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~g---~-~~~l~~~~~~~-~~~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----D--RITLDFFG---D-QLVCHLSDRWD-REVSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----T--EEEEEETT---E-EEEEEECSCSC-SSCCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----C--cEEEEEeC---C-EEEEEEcCccc-ccCCCCCCeEEEEE
Confidence            4689999999999999999999999999865432    1  23333222   1 23343222111 11234678999999


Q ss_pred             CC---hHHHHHHHHHHHHHhCCeeecCCccC---CCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          198 DD---VYKSAEVVNLVTQELGGKITRQPGPI---PGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       198 ~d---~~~~~~~l~~~~~~~G~~i~~~p~~~---~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                      .+   +++++++|    +++|+++..+|...   ..+..+.+||+|||||+|||++..+.
T Consensus        76 ~~~~d~~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~  131 (135)
T 3rri_A           76 RDKKHFDNLYKLA----KQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDD  131 (135)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSG
T ss_pred             cChHhHHHHHHHH----HHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECCh
Confidence            65   66666666    99999998776542   12235789999999999999987543

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.71  E-value=1.4e-16  Score=114.85  Aligned_cols=112  Identities=15%  Similarity=0.149  Sum_probs=82.2

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .++ |+.|.|+|++++.+||+++|||++....     ++ .+.+..+.. ....+.+....     ....+..|++|.|+
T Consensus         7 ~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~-----~~-~~~~~~~~~-~~~~l~l~~~~-----~~~~~~~~~~~~v~   73 (119)
T 2pjs_A            7 RRV-VANIATPEPARAQAFYGDILGMPVAMDH-----GW-IVTHASPLE-AHAQVSFAREG-----GSGTDVPDLSIEVD   73 (119)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC-----SS-EEEEEEEEE-EEEEEEEESSS-----BTTBCCCSEEEEES
T ss_pred             eEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC-----CE-EEEEecCCC-CcEEEEEEcCC-----CCCCceeEEEEEEC
Confidence            356 9999999999999999999999987642     12 223332211 13345443221     12245789999999


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      |++++++++    +++|+++..+|...+. +.+.+||+|||||.|||++.
T Consensus        74 d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           74 NFDEVHARI----LKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             CHHHHHHHH----HHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             CHHHHHHHH----HHCCCccccCCccCCC-ccEEEEEECCCCCEEEEEec
Confidence            999999999    8999999887766554 35899999999999999875

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.71  E-value=1.1e-16  Score=114.28  Aligned_cols=108  Identities=19%  Similarity=0.194  Sum_probs=79.3

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE-
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST-  197 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v-  197 (258)
                      .++.|+.|.|+|++++.+||+++|||++.....   .  ..+++..++   +..+.+......    ...+..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---C--cEEEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            478999999999999999999999999876532   1  234554332   345666543221    134688999999 


Q ss_pred             --CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEE
Q 025083          198 --DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  246 (258)
Q Consensus       198 --~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  246 (258)
                        +|+++++++|    +++|+++. +|.. .+  ++.+||+|||||.|||+
T Consensus        70 ~~~d~~~~~~~l----~~~G~~~~-~p~~-~~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRL----KEDGFLVE-PPKH-AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHH----HHTTCCCC-CCEE-C---CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHH----HHCCCEEe-cCcC-CC--cEEEEEECCCCcEEEEe
Confidence              6777777777    89999975 4533 22  58999999999999997

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.71  E-value=3.6e-16  Score=117.18  Aligned_cols=119  Identities=20%  Similarity=0.213  Sum_probs=86.4

Q ss_pred             CCCCCceeeeEEecChhhHHHHH---HHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecC---Ccccc-cCC
Q 025083          116 PTPEPLCQVMLRVGDLGRSIKFY---EKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG---VTEYT-KGN  188 (258)
Q Consensus       116 ~~~~~i~hv~l~v~d~~~s~~FY---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~-~~~  188 (258)
                      ....++.|+.|.|+|++++.+||   +++|||++......    . ..++. +    ...+.|.....   ..+.. ...
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~----~-~~~~~-g----~~~l~l~~~~~~~~~~~~~~~~~   85 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR----G-KSYKH-G----KTYLVFVQTEDRFQTPTFHRKRT   85 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT----E-EEEEE-T----TEEEEEEECCGGGSCSCCCTTSS
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC----C-ceEec-C----CeEEEEEEcCCCcccccccccCC
Confidence            35678999999999999999999   99999998776431    1 23443 2    34566655432   01111 234


Q ss_pred             ceeeEEEEEC---ChHHHHHHHHHHHHHhCCeeec-CCccCCCC-CeeEEEEECCCCCEEEEEcc
Q 025083          189 AYAQVAISTD---DVYKSAEVVNLVTQELGGKITR-QPGPIPGL-NTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       189 g~~hi~~~v~---d~~~~~~~l~~~~~~~G~~i~~-~p~~~~~~-~~~~~~~~DPdG~~iel~~~  248 (258)
                      +..|++|.|+   |+++++++|    +++|+++.. +|.+...+ +.+.+||+|||||.|||+++
T Consensus        86 g~~hi~f~v~~~~dv~~~~~~l----~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           86 GLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SCCEEEEECSCHHHHHHHHHHH----HHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             CceEEEEECCCHHHHHHHHHHH----HHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            7889999999   777777777    899999987 46544332 35789999999999999863

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.70  E-value=2.9e-16  Score=118.05  Aligned_cols=117  Identities=15%  Similarity=0.226  Sum_probs=83.7

Q ss_pred             CCCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCc--------eeEEEEEEecCCcccccC
Q 025083          116 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQ--------TTVLELAYSYGVTEYTKG  187 (258)
Q Consensus       116 ~~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~l~~~~~~~~~~~~  187 (258)
                      +|..++.|+.|.|+|++++++||+++|||++....   +..+  +++..++..-        .....+...      ...
T Consensus        21 gM~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~~~--~~~~~~~~~~~l~~~~~~~~~~~l~~~------~~~   89 (148)
T 2r6u_A           21 GMTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEIP---DMDY--SMVTTGPVGESGMPDEPGYINGGMMQR------GEV   89 (148)
T ss_dssp             TTCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEET---TTTE--EEEECSCBCTTSSBCSSSCBCEEEEES------SSS
T ss_pred             ccCCceEEEEEEeCCHHHHHHHHHHccCcEEEECC---CCCE--EEEEeCCcceeecccCCcccccceeec------CCC
Confidence            45678999999999999999999999999987631   1222  3333332100        011222211      111


Q ss_pred             CceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          188 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       188 ~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      .++ |++|.|+|+++++++|    +++|+++..+|...++. ++.+||+|||||.|||++..
T Consensus        90 ~g~-~l~f~v~dld~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           90 TTP-VVTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             CSC-EEEEECSCHHHHHHHH----HHTTCEEEEEEEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             CeE-EEEEEcCCHHHHHHHH----HHcCCeEecCCeecCCC-EEEEEEECCCCCEEEEEecC
Confidence            344 8999999999999999    89999998877655522 38999999999999999864

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.70  E-value=1.1e-16  Score=135.96  Aligned_cols=118  Identities=26%  Similarity=0.482  Sum_probs=93.0

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCC-----------ccceeEEEeeecCCCceeEEEEEEecCCccccc
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-----------ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTK  186 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  186 (258)
                      ..++.|++|.|+|+++|++||+++|||++..+....           ++.+...++.++.......++|..+.....+..
T Consensus        25 ~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~  104 (330)
T 3zi1_A           25 ARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKL  104 (330)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCCCB
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCcccc
Confidence            468999999999999999999999999987765443           345667777766544567888887665444556


Q ss_pred             CCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          187 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       187 ~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +.|+.||+|.|+|+   .+++    +++|+++...|    .   +.+||+|||||.|||++..
T Consensus       105 ~~g~~hiaf~V~d~---~~~l----~~~G~~~~~~~----~---~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          105 GNDFMGITLASSQA---VSNA----RKLEWPLTEVA----E---GVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             CSSEEEEEEECHHH---HHHH----HHHTCCCEEEE----T---TEEEEECTTSCEEEEESSC
T ss_pred             CCCeeEEEEECchH---HHHH----HHcCCceeccC----C---ceEEEECCCCCEEEEEecC
Confidence            67999999999986   4556    78999987543    1   4889999999999999875

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.70  E-value=1.3e-16  Score=118.25  Aligned_cols=119  Identities=18%  Similarity=0.154  Sum_probs=85.8

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecC-----Cc-ccccCCcee
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYG-----VT-EYTKGNAYA  191 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-----~~-~~~~~~g~~  191 (258)
                      ..++.|+.|.|+|++++.+||++ |||++......  ..  .+.+..++   ...+.+.....     +. ....+.+..
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~--~~--~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~   73 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADS--AP--HTEAVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHRF   73 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGG--CS--EEEEECTT---SCEEEEEEHHHHHHHCTTCCCCBSSCSE
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCC--Cc--eEEEEcCC---CeEEEEecCccchhhCcccCCCCCCCeE
Confidence            46789999999999999999998 99998765321  11  22333222   34566654211     10 112345788


Q ss_pred             eEEEEEC---ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          192 QVAISTD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       192 hi~~~v~---d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |++|.|+   |+++++++|    +++|+++..+|...++ +.+.+||+|||||.|||++..
T Consensus        74 ~l~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           74 AIAFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEEECSSHHHHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEECTTCCEEEEEEEC
T ss_pred             EEEEEeCCHHHHHHHHHHH----HHCCCceeeCCcccCC-CcEEEEEECCCCCEEEEEeCC
Confidence            9999999   788888887    8999999887766554 358899999999999999876

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.70  E-value=3.9e-16  Score=113.57  Aligned_cols=110  Identities=14%  Similarity=0.067  Sum_probs=82.8

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECC
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  199 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  199 (258)
                      ...|+.|.|+|++++.+||+++|||++....    .++  +.+..+    ...+.|......    ...+..|++|.|+|
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~--~~~~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~d   70 (124)
T 1xrk_A            5 TSAVPVLTARDVAEAVEFWTDRLGFSRVFVE----DDF--AGVVRD----DVTLFISAVQDQ----VVPDNTQAWVWVRG   70 (124)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEC----SSE--EEEEET----TEEEEEEECSCT----TTGGGCEEEEEEEC
T ss_pred             cceeEEEEcCCHHHHHHHHHHccCceEEecC----CCE--EEEEEC----CEEEEEEcCCCC----CCCCceEEEEEECC
Confidence            3578999999999999999999999987652    122  334432    345555543221    12345689999999


Q ss_pred             hHHHHHHHHHHHHHh------CC--eeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          200 VYKSAEVVNLVTQEL------GG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       200 ~~~~~~~l~~~~~~~------G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +++++++|    +++      |+  ++..+|...++ + +.++|+|||||.|||++..
T Consensus        71 v~~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           71 LDELYAEW----SEVVSTNFRDASGPAMTEIVEQPW-G-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHHHHH----TTTSBSCTTTCSSCEECCCEEETT-E-EEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHHH----HHhcccccCCccccccCCceecCC-C-CEEEEECCCCCEEEEEEec
Confidence            99999999    888      99  88888776655 3 8999999999999999763

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.70  E-value=2.4e-16  Score=116.36  Aligned_cols=122  Identities=15%  Similarity=0.110  Sum_probs=82.3

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      ..-.+..|.|+|+++|++||+++|||++.....    .  .+++..+    ...+.|.........+.+.+..|++|.|+
T Consensus         6 ~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~--~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~l~~~v~   75 (134)
T 3fcd_A            6 IHQITPFLHIPDMQEALTLFCDTLGFELKYRHS----N--YAYLELS----GCGLRLLEEPARKIIPDGIARVAICIDVS   75 (134)
T ss_dssp             CCEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----T--EEEEEET----TEEEEEEECCCC---------EEEEEECS
T ss_pred             hhcceeEEEECCHHHHHHHHHhccCcEEEEeCC----C--eEEEEEC----CEEEEEEeCCCCCcCCCCCceEEEEEEeC
Confidence            345577999999999999999999999886642    1  3444443    34566655433211122234578999999


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                      |++++++++.++-.+.|+++..+|...++ +.+.++|+|||||.|||.+....
T Consensus        76 dv~~~~~~l~~~g~~~g~~i~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  127 (134)
T 3fcd_A           76 DIDSLHTKLSPALENLPADQVEPLKNMPY-GQREFQVRMPDGDWLNFTAPLAE  127 (134)
T ss_dssp             CHHHHHHHHHHHHTTSCGGGEEEEEECTT-SEEEEEEECTTSCEEEEEEECCT
T ss_pred             CHHHHHHHHHhcCCccCCccccCCcccCC-CcEEEEEECCCCCEEEEEEcccc
Confidence            99999999932211345566666655544 45899999999999999987643

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.68  E-value=3.6e-16  Score=117.23  Aligned_cols=116  Identities=16%  Similarity=0.195  Sum_probs=82.1

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCC---cccccCCceeeEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGV---TEYTKGNAYAQVA  194 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~g~~hi~  194 (258)
                      ..+|.||.|.|+|++++.+||+++|||++.....    ..  ..+..++    ..+.|......   .......|..|++
T Consensus        25 i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~--~~l~~g~----~~l~l~~~~~~~~~~~~~~~~g~~~~~   94 (147)
T 3zw5_A           25 IRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE----DR--KALCFGD----QKFNLHEVGKEFEPKAAHPVPGSLDIC   94 (147)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----TE--EEEEETT----EEEEEEETTSCCSSCCSSCCTTCCEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC----Cc--eEEEECC----cEEEEEEcCCCcCcccCCCCCCCceEE
Confidence            4689999999999999999999999999885432    12  2233332    24444432111   1112234678899


Q ss_pred             EEEC-ChHHHHHHHHHHHHHhCCeeecCCccCCC--CCeeEEEEECCCCCEEEEEc
Q 025083          195 ISTD-DVYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       195 ~~v~-d~~~~~~~l~~~~~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~  247 (258)
                      |.+. |+++++++|    +++|+++..+|.+..+  +..+.+||+|||||+|||++
T Consensus        95 ~~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           95 LITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             EECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             EEeccCHHHHHHHH----HHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            9886 999999999    8999998866644322  12368999999999999986

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.68  E-value=1.3e-15  Score=114.41  Aligned_cols=119  Identities=23%  Similarity=0.211  Sum_probs=75.6

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEec-------CCcccccCCce
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY-------GVTEYTKGNAY  190 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-------~~~~~~~~~g~  190 (258)
                      ..++.||+|.|+|+++|++||++ ||+........+.  .. .+.. ..   ...+.+....       .......+.+.
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~--~~-~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES--CA-CMVV-SE---QAFVMLIDRARFADFTSKPIADATATTE   78 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT--EE-EEEE-ET---TEEEEEEEHHHHGGGCSSCBCCTTTCBS
T ss_pred             CccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc--ee-EEee-cC---cceEeeeccccccccccccCCCCCCCCe
Confidence            56899999999999999999987 5665544332221  11 2222 11   1222222110       00011223356


Q ss_pred             eeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          191 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       191 ~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      .|++|.|++.+ .++++.+++.++|+++..+|...++  ++.+||+|||||+|||+.
T Consensus        79 ~~~a~~v~~~~-~vd~~~~~~~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~  132 (149)
T 4gym_A           79 AIVCVSAIDRD-DVDRFADTALGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMW  132 (149)
T ss_dssp             CEEEEECSSHH-HHHHHHHHHHHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEE
T ss_pred             eEEEEEeccHH-HHHHHHHHHHhcCceeeccccccCC--EEEEEEEcCCCCEEEEEE
Confidence            79999998632 3334444448999999998876543  588999999999999985

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.68  E-value=4.1e-16  Score=113.12  Aligned_cols=109  Identities=14%  Similarity=0.058  Sum_probs=81.2

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECC
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDD  199 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d  199 (258)
                      ...++.|.|+|+++|.+||+++|||++....    .+  .+++..+    ...+.|......   +. .+..|++|.|+|
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~----~~--~~~~~~~----~~~l~l~~~~~~---~~-~~~~~~~~~v~d   70 (122)
T 1qto_A            5 LGAVPVLTAVDVPANVSFWVDTLGFEKDFGD----RD--FAGVRRG----DIRLHISRTEHQ---IV-ADNTSAWIEVTD   70 (122)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHTTCCEEEEEC----SS--EEEEEET----TEEEEEEECSCH---HH-HTTCEEEEEESC
T ss_pred             cceeEEEEcCCHHHHHHHHHhccCcEEeeCC----CC--EEEEEEC----CEEEEEEcCCCC---CC-CCceEEEEEECC
Confidence            3458999999999999999999999987651    12  2344432    344555433221   11 234689999999


Q ss_pred             hHHHHHHHHHHHHHh------CC--eeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          200 VYKSAEVVNLVTQEL------GG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       200 ~~~~~~~l~~~~~~~------G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      ++++++++    +++      |+  ++..+|...++ + +.++|+|||||.|||+++
T Consensus        71 vd~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           71 PDALHEEW----ARAVSTDYADTSGPAMTPVGESPA-G-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHH----TTTSCSCTTCTTSCEECCCEEETT-E-EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHH----HhhccccccCccccccCCCcCCCC-C-cEEEEECCCCCEEEEecC
Confidence            99999999    888      99  88877766554 3 889999999999999875

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.68  E-value=3.5e-16  Score=127.70  Aligned_cols=119  Identities=18%  Similarity=0.281  Sum_probs=84.3

Q ss_pred             cCcccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCee
Q 025083           15 EWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFG   94 (258)
Q Consensus        15 ~~~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~   94 (258)
                      .+....+++++||.|.|+|++++++||+++|||++..+..   +   .+++..++    ..+.+.....     .+.++.
T Consensus        18 ~~~~~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~---~---~~~L~~g~----~~l~l~~~~~-----~~~~~~   82 (252)
T 3pkv_A           18 LYFQGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA---D---AFTIQLGV----SQIQFRAAAD-----GTKPFY   82 (252)
T ss_dssp             -------CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS---S---EEEEEETT----EEEEEEECCT-----TCCCCC
T ss_pred             hhccCcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC---C---EEEEEeCC----EEEEEEECCC-----CCCCee
Confidence            3566678999999999999999999999999999876632   1   24444332    2344433211     123456


Q ss_pred             eEEEEcCC--------------------------------------CCCCcEEEEEECCCC------------CCCceee
Q 025083           95 HLAIATED--------------------------------------DPDGYIFELIQRGPT------------PEPLCQV  124 (258)
Q Consensus        95 hia~~v~d--------------------------------------DP~G~~iel~~~~~~------------~~~i~hv  124 (258)
                      |+||.|++                                      ||||+.|||++.+..            ..+++||
T Consensus        83 hiaf~V~~~dld~~~~rL~~~v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV  162 (252)
T 3pkv_A           83 HIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEI  162 (252)
T ss_dssp             EEEEEECTTCHHHHHHHHTTSSCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEE
T ss_pred             EEEEEecHHHHHHHHHHHHhcceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeE
Confidence            66666542                                      999999999987521            3589999


Q ss_pred             eEEecChhhHHHHHHHhcCCeEeee
Q 025083          125 MLRVGDLGRSIKFYEKALGMKLLRT  149 (258)
Q Consensus       125 ~l~v~d~~~s~~FY~~~lG~~~~~~  149 (258)
                      .|.|+|++++.+|| ++|||+...+
T Consensus       163 ~L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          163 NITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             EEECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             EEEeCCHHHHHHHH-HHcCCCcccC
Confidence            99999999999999 9999998765

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.67  E-value=1.2e-15  Score=111.31  Aligned_cols=112  Identities=21%  Similarity=0.256  Sum_probs=82.4

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECCh
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDV  200 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~  200 (258)
                      ..++.|.|+|++++.+||++ |||++....    ..  .+++..+    ...+.|......   ....+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~----~~--~~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRD----AG--WMILQRG----DLMLEFFAHPGL---DPLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEEC----SS--EEEEEET----TEEEEEEECTTC---CGGGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecC----CC--EEEEEeC----CEEEEEEeCCCC---CCCCcceEEEEEECCH
Confidence            46899999999999999997 999987651    12  3344433    344666543221   1124678999999999


Q ss_pred             HHHHHHHHHHHHHhCCee-------ecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          201 YKSAEVVNLVTQELGGKI-------TRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       201 ~~~~~~l~~~~~~~G~~i-------~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                      +++++++    +++|+++       ..+|...++ +.+.++|+|||||.|||++....
T Consensus        70 ~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  122 (126)
T 1ecs_A           70 AEFYRQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNELL  122 (126)
T ss_dssp             HHHHHHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECCC-
T ss_pred             HHHHHHH----HHCCCccccccCccccCCcccCc-ccEEEEEECCCCCEEEEecchhh
Confidence            9999999    8899984       666655543 34889999999999999987653

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.67  E-value=5.9e-16  Score=115.08  Aligned_cols=116  Identities=17%  Similarity=0.162  Sum_probs=81.0

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEe-----cC-Ccc-cccCCceee
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYS-----YG-VTE-YTKGNAYAQ  192 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-----~~-~~~-~~~~~g~~h  192 (258)
                      ++.|+.|.|+|++++.+||+++|||++......+  .+  .++..+    ...+.+...     .. ..+ ...+.+ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP--IF--RGLDTG----KSCIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT--TE--EEEECS----SSEEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC--ce--EEeecC----CEEEEEcCccccccccccccCCCCCCe-EE
Confidence            7999999999999999999999999986543221  22  233322    223433221     00 011 112335 49


Q ss_pred             EEEEECC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          193 VAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       193 i~~~v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      ++|.|+|   +++++++|    +++|+++..+|...++ +.+.+||+|||||.|||++..
T Consensus        79 ~~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVA----IAAGATLIKAPYETYY-HWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             EEEECSCHHHHHHHHHHH----HHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHH----HHcCCeEecCccccCC-ccEEEEEECCCCCEEEEEEcc
Confidence            9999995   77777777    8999999888766544 468999999999999998754

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.67  E-value=1.7e-15  Score=120.19  Aligned_cols=181  Identities=12%  Similarity=0.074  Sum_probs=116.5

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeE---EE
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL---AI   98 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi---a~   98 (258)
                      ....+..|+|.|++++++||+++|||++..++.      ..+.++.+..  ...+.+-..+.... ....|..|+   ++
T Consensus         9 ~~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~--~~~L~lEEsp~~~~-~~~~Glkh~a~i~i   79 (244)
T 3e0r_A            9 IVRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTG--LEKLVLEEAPSMRT-RKVEGRKKLARLIV   79 (244)
T ss_dssp             EEEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTC--CEEEEEEECCTTTC-BCCCSSCSEEEEEE
T ss_pred             eEEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCC--cceEEEEeCCCccc-ccccccceeeeEEE
Confidence            346778999999999999999999999987743      3566664332  22344433222222 223577777   59


Q ss_pred             EcCC-----------------------------CCCCcEEEEEECCC----------------------CCCCceeeeEE
Q 025083           99 ATED-----------------------------DPDGYIFELIQRGP----------------------TPEPLCQVMLR  127 (258)
Q Consensus        99 ~v~d-----------------------------DP~G~~iel~~~~~----------------------~~~~i~hv~l~  127 (258)
                      .||+                             ||+|+.||++...+                      +...+ ||.|.
T Consensus        80 ~vp~~~el~~lL~~~~~~~~~~~gdhgyA~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~I~Ln  158 (244)
T 3e0r_A           80 KVENPLEIEGILSKTDSIHRLYKGQNGYAFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-SMELH  158 (244)
T ss_dssp             EESSHHHHHHHHTTCSCCSEEEECSSSEEEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCCCSSEEE-EEEEE
T ss_pred             EcCCHHHHHHHHhcccccccccccCCcEEEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccccCCCCcEE-EEEEE
Confidence            9998                             99999999986531                      01246 99999


Q ss_pred             ecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHHHHHH
Q 025083          128 VGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVV  207 (258)
Q Consensus       128 v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l  207 (258)
                      |+|.+++  ||.+ +|+           +..+.|....+.  .         -+.+.....|+..+-|.|++  ..++.+
T Consensus       159 V~d~~~s--Fy~~-~~~-----------~~~~~F~~a~G~--d---------l~~~~~~t~gLe~l~~~v~~--~dl~~l  211 (244)
T 3e0r_A          159 LPTDIES--FLES-SEI-----------GASLDFIPAQGQ--D---------LTVDNTVTWDLSMLKFLVNE--LDIASL  211 (244)
T ss_dssp             ECTTCCC--SCCH-HHH-----------TTTEEEEECCCT--T---------TTCCTTSBSSEEEEEEEESS--CCHHHH
T ss_pred             cCchHHH--Hhhc-cCC-----------cccEEEEcccCC--C---------CCCCCCCccCceEEEEEeCH--HHHHHH
Confidence            9999999  9975 444           112333331110  0         01111223477788888853  334455


Q ss_pred             HHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          208 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       208 ~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      .++++++|..+..        ..+++.+.||+|+.|.|..
T Consensus       212 ~~~L~~~g~~idk--------k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          212 RQKFESTEYFIPK--------SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             HHHTTTSCEECCT--------TCCEEEEECTTSCEEEEEE
T ss_pred             HHHHHhCCceEcc--------cCCEEEEECCCCCEEEEEE
Confidence            4445777764432        3478899999999999864

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.64  E-value=2.6e-15  Score=112.16  Aligned_cols=115  Identities=16%  Similarity=0.074  Sum_probs=79.3

Q ss_pred             eeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEec---C-----CcccccCCceeeE
Q 025083          122 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY---G-----VTEYTKGNAYAQV  193 (258)
Q Consensus       122 ~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~---~-----~~~~~~~~g~~hi  193 (258)
                      ..+.|.|+|+++|++||+++|||++......  .++  +++..+    ...+.|....   .     ....+.+.++. +
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~--~~~--~~l~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPD--EEF--VYLTLD----GVDVMLEGIAGKSRKWLSGDLEFPLGSGVN-F   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGG--GTE--EEEEET----TEEEEEEEC-----------CCSSTTTTEE-E
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCC--CCE--EEEEcC----CeEEEEEeccCCCcccccCccccCCCCceE-E
Confidence            4689999999999999999999998753221  122  344433    2334454321   0     00112234665 9


Q ss_pred             EEEECChHHHHHHHHHHHHH-hCCeeecCCccC------CCCCeeEEEEECCCCCEEEEEcch
Q 025083          194 AISTDDVYKSAEVVNLVTQE-LGGKITRQPGPI------PGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       194 ~~~v~d~~~~~~~l~~~~~~-~G~~i~~~p~~~------~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +|.|+|+++++++|    ++ +|+++..+|...      ...+++.++|+|||||.|||++..
T Consensus        78 ~~~v~dvd~~~~~l----~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           78 QWDVIDIEPLYQRV----NESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             EEECSCHHHHHHHH----HHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             EEEECCHHHHHHHH----HhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            99999999999999    88 999988776531      122457889999999999999865

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.63  E-value=5.4e-15  Score=125.71  Aligned_cols=125  Identities=14%  Similarity=0.175  Sum_probs=87.8

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCC-ccceeEEEeeecCCCceeEEEEEEecCCccc-ccCCceeeEE
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-ELKCALAMLGYAEEDQTTVLELAYSYGVTEY-TKGNAYAQVA  194 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~g~~hi~  194 (258)
                      +..+|+||+|.|+|++++.+||+++|||++..+.... +.+....+++.........+.+.......+. ....++.|++
T Consensus         5 ~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hia   84 (335)
T 3oaj_A            5 KTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTS   84 (335)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEEE
Confidence            3568999999999999999999999999988764221 1222233444322212456666544332111 2234789999


Q ss_pred             EEEC--ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          195 ISTD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       195 ~~v~--d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |.|+  |++++.++|    +++|+++..  ..  ..+.+.+||+|||||.|||++..
T Consensus        85 f~V~~~dl~~~~~rL----~~~Gv~~~~--~~--~~g~~~~~f~DPdGn~iEl~~~~  133 (335)
T 3oaj_A           85 YVVPKGAMAFWEKRL----EKFNVPYTK--IE--RFGEQYVEFDDPHGLHLEIVERE  133 (335)
T ss_dssp             EEECTTCHHHHHHHH----HHTTCCCEE--EE--ETTEEEEEEECTTSCEEEEEECS
T ss_pred             EEecHHHHHHHHHHH----HhCcceeee--ec--cCCcEEEEEECCCCCEEEEEEeC
Confidence            9999  888888888    899998864  22  22458999999999999999875

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.63  E-value=6.1e-16  Score=114.84  Aligned_cols=116  Identities=16%  Similarity=0.186  Sum_probs=81.9

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEE-----EEe---cCCcccccCCc
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLEL-----AYS---YGVTEYTKGNA  189 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l-----~~~---~~~~~~~~~~g  189 (258)
                      ..++.|+.|.|+|++++.+||+++|||++.....    .+  +.+..     ...+..     ...   ....+...+.+
T Consensus         6 ~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~--~~~~~-----g~~l~~~~~~~~~~~~~~~~~~~~~~~~   74 (141)
T 2qnt_A            6 GMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG----SF--VLFET-----GFAIHEGRSLEETIWRTSSDAQEAYGRR   74 (141)
T ss_dssp             SCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS----SE--EEETT-----SCEEEEHHHHHHHHHSCCC--CCCSCCS
T ss_pred             ccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC----Cc--EEEec-----cceeccCchhhhhccccCCccccccCCC
Confidence            4678999999999999999999999999876431    11  22221     112211     000   01111123457


Q ss_pred             eeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          190 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       190 ~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      ..|++|.|+|+++++++|    ++ |+++..+|...++ +.+.++|+|||||.|||++...
T Consensus        75 ~~~~~~~v~dv~~~~~~l----~~-G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           75 NMLLYFEHADVDAAFQDI----AP-HVELIHPLERQAW-GQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             SCEEEEEESCHHHHHC-C----GG-GSCEEEEEEECTT-SCEEEEEECTTCCEEEEEECC-
T ss_pred             ceEEEEEeCcHHHHHHHH----Hc-CCccccCCccCCC-CCEEEEEECCCCCEEEEEecch
Confidence            889999999999999999    88 9999888766654 3588999999999999998753

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.62  E-value=7.1e-15  Score=126.30  Aligned_cols=117  Identities=21%  Similarity=0.144  Sum_probs=86.3

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .+|.||.|.|+|++++++||+++|||++..+..      ..+++....+..++.+.+...       ...++.|++|.|.
T Consensus        16 ~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~-------~~~gl~~~a~~v~   82 (365)
T 4ghg_A           16 LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKG-------PVAALKAMAFRVR   82 (365)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEEEEEES
T ss_pred             CEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccC-------CCCCcceEEEEeC
Confidence            578999999999999999999999999887642      234455443333455555422       1247899999999


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      + .+.++++.++|+++|+++...+.....+.++.++|+|||||.|||+...
T Consensus        83 s-~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~  132 (365)
T 4ghg_A           83 T-PEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFET  132 (365)
T ss_dssp             S-HHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             C-HHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEe
Confidence            8 3445566666799999988765443333457899999999999998643

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.61  E-value=1.3e-14  Score=106.50  Aligned_cols=95  Identities=53%  Similarity=1.016  Sum_probs=71.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~  101 (258)
                      |+++|+.|.|+|++++++||+++|||++......+++.+..+++..++......++|..+........+.++.|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            68999999999999999999999999988765444455667777765432345677776544333334568889999999


Q ss_pred             C---------------------------------CCCCcEEEEEECCC
Q 025083          102 D---------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus       102 d---------------------------------DP~G~~iel~~~~~  116 (258)
                      |                                 ||+|+.|||++...
T Consensus        81 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             CHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCC
Confidence            8                                 99999999998753

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.59  E-value=7.6e-15  Score=110.05  Aligned_cols=115  Identities=14%  Similarity=0.079  Sum_probs=77.3

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeee-ecCCccceeEEEeeecCCCceeEEEEEEecCCccccc---CCc----
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRT-IDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTK---GNA----  189 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~---~~g----  189 (258)
                      ..++.|+.|.|+|+++|.+||+++|||++... ...+.  +..  ++  .   .  +.|. ...+.....   +.+    
T Consensus        19 ~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~--~~~--~g--~---~--l~l~-~~~~~~~~~~~~~~~~~~g   86 (148)
T 3bt3_A           19 VVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG--FGD--YG--C---V--FDYP-SEVAVAHLTPFRGFHLFKG   86 (148)
T ss_dssp             EEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS--CEE--EE--E---E--ESSC-TTTTSCC--CCCSEEEEES
T ss_pred             eEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC--ccE--Ec--c---E--EEEe-ccCCCcccccccccceeec
Confidence            35689999999999999999999999998642 22221  222  21  1   1  3331 111100011   111    


Q ss_pred             ---eeeEEE-EECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          190 ---YAQVAI-STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       190 ---~~hi~~-~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                         .++.+| .|+|+++++++|    +++|+++..+|...++ +.+.+||+|||||.|||+++.
T Consensus        87 ~~~~~~~~~~~v~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           87 EPIKGVAGFMMIEGIDALHKYV----KENGWDQISDIYTQPW-GARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CCCSSEEEEEEEECHHHHHHHH----HHTTCCCBCCCEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCCccEEEEEcCCHHHHHHHH----HHcCCccccCcccCCC-ccEEEEEECCCCCEEEEeeec
Confidence               122265 999999999999    8999999888866554 457899999999999999753

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.58  E-value=4.7e-14  Score=120.09  Aligned_cols=126  Identities=15%  Similarity=0.173  Sum_probs=84.6

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeec-CCccceeEEEeeecCCCceeEEEEEEecCCcc-cccCCceeeEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTID-SPELKCALAMLGYAEEDQTTVLELAYSYGVTE-YTKGNAYAQVAI  195 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~~  195 (258)
                      ..++.||.|.|+|+++|++||+++|||++..... ..+.+....++..+.......+.+........ .....+..|++|
T Consensus        28 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hiaf  107 (338)
T 1zsw_A           28 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL  107 (338)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             CccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEEE
Confidence            5689999999999999999999999999876542 11111223333322111234555543322111 112347889999


Q ss_pred             EECC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          196 STDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       196 ~v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      .|+|   +++++++|    +++|+++..++. . . +.+.+||+|||||.|||++...
T Consensus       108 ~v~~~~dld~~~~~l----~~~G~~~~~~~~-~-~-G~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A          108 LVPSEDSLHYWKERF----EKFDVKHSEMTT-Y-A-NRPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             EESCHHHHHHHHHHH----HHTTCEECCSEE-E-T-TEEEEEEECTTCCEEEEEECTT
T ss_pred             EcCCHHHHHHHHHHH----HHCCCccccccc-c-C-CcEEEEEECCCCCEEEEEEcCC
Confidence            9994   56666666    899999886544 2 2 3488999999999999998763

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.57  E-value=3.4e-14  Score=108.78  Aligned_cols=119  Identities=16%  Similarity=0.161  Sum_probs=77.6

Q ss_pred             CceeeeEEecC--hhhHHHHHHHhcCCeEeeee-------cCCccceeEEEeeecCCCceeEEEEEEecCC-c-cccc--
Q 025083          120 PLCQVMLRVGD--LGRSIKFYEKALGMKLLRTI-------DSPELKCALAMLGYAEEDQTTVLELAYSYGV-T-EYTK--  186 (258)
Q Consensus       120 ~i~hv~l~v~d--~~~s~~FY~~~lG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~-~~~~--  186 (258)
                      .-.++.|.|+|  +++|++||+++|||++....       ....+.+..+.+..+    ...+.+...... . +...  
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----g~~l~l~~~~~~~~~~~~~~~   99 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSE   99 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTT
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC----CeEEEEeCCCcccCCccccCC
Confidence            34688999999  99999999999999987543       111122222334432    223444322111 0 0111  


Q ss_pred             CCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccC--CCCCeeEEEEECCCCCEEEEEcchh
Q 025083          187 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       187 ~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      +.+ .|++|.|+|+++++++|    +++|++ ..+|...  ++  +++++|+||+||.|+|++...
T Consensus       100 ~~g-~~l~~~vdDvda~~~~l----~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A          100 GSG-VTFLLGTKDAEAAVAKA----VDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             SCC-CEEEEECSCHHHHHHHH----HHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC---
T ss_pred             CCc-EEEEEEcCCHHHHHHHH----HHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecC
Confidence            223 48999999999999999    899999 8887765  44  589999999999999998754

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.57  E-value=4.2e-14  Score=118.85  Aligned_cols=115  Identities=18%  Similarity=0.129  Sum_probs=81.7

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeee-cCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGY-AEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      .+|.||.|.|+|++++++||+++|||++..+...  .   .+++.. +.. .+..+.+...       ...+..|++|.|
T Consensus         7 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~--~---~~~l~~~~~~-~~~~l~l~~~-------~~~~~~h~a~~v   73 (309)
T 3hpy_A            7 LRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ--G---RVYFKCWDER-DHSCYIIREA-------DTAGIDFFGFKV   73 (309)
T ss_dssp             EEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT--S---CEEEECTTCC-BSCSEEEEEC-------SSCEEEEEEEEE
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC--C---eEEEEeccCC-CceEEEEEeC-------CCCceeEEEEEE
Confidence            4789999999999999999999999998876421  1   133332 221 2244544322       124789999999


Q ss_pred             CC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          198 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       198 ~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      +|   +++++++|    +++|+++...|.....+.++.+||+|||||.|||++...
T Consensus        74 ~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~  125 (309)
T 3hpy_A           74 LDKATLEKLDADL----QAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKT  125 (309)
T ss_dssp             SCHHHHHHHHHHH----HHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             CCHHHHHHHHHHH----HhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccc
Confidence            98   55555555    899999877654322234589999999999999998653

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.56  E-value=3.6e-14  Score=117.83  Aligned_cols=122  Identities=17%  Similarity=0.087  Sum_probs=85.2

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCcc-ceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      +..+.|+.|.|+|++++++||+++|||+.......... .+..  +..++   .....+.......+ .......+++|.
T Consensus        30 ~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~--~~~~g---~~~~~l~~~~~~~~-~~~~~~~~~~~~  103 (282)
T 3oxh_A           30 QGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSM--ATLNG---EAVAAIAPMPPGAP-EGMPPIWNTYIA  103 (282)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEE--EEETT---EEEEEEEECCSCC----CCCEEEEEEE
T ss_pred             CCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEE--EEeCC---eeeEeeccCCCCCC-CCCCCcEEEEEE
Confidence            35799999999999999999999999998765322110 2332  22222   22333332221111 123356789999


Q ss_pred             ECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          197 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       197 v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      |+|++++++++    +++|+++..+|...++ .+++++|+||+||.|+|++...
T Consensus       104 v~d~d~~~~~l----~~~G~~~~~~p~~~~~-~g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A          104 VDDVDAVVDKV----VPGGGQVMMPAFDIGD-AGRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             CSCHHHHHTTT----TTTTCEEEEEEEEETT-TEEEEEEECTTCCEEEEEEESS
T ss_pred             eCCHHHHHHHH----HHCCCEEEECCEecCC-CeEEEEEECCCCCEEEEEEccc
Confidence            99999999999    8999999888766543 3589999999999999998753

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.55  E-value=9e-14  Score=103.53  Aligned_cols=95  Identities=62%  Similarity=1.088  Sum_probs=70.5

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~   99 (258)
                      ++++++||.|.|+|++++++||+++|||++......+++.+..+++..++......++|...........+.++.|++|.
T Consensus         5 ~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~   84 (144)
T 2c21_A            5 PSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIG   84 (144)
T ss_dssp             -CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEE
T ss_pred             ccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEE
Confidence            47899999999999999999999999999987644333445667777654222456777665433233345688999999


Q ss_pred             cCC----------------------------CCCCcEEEEEEC
Q 025083          100 TED----------------------------DPDGYIFELIQR  114 (258)
Q Consensus       100 v~d----------------------------DP~G~~iel~~~  114 (258)
                      |+|                            ||+|+.|||++.
T Consensus        85 v~d~~~~~~~l~~~G~~~~~~~g~~~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           85 VEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             ESCHHHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEH
T ss_pred             eCCHHHHHHHHHHCCCEEeccCCcEEEEEEECCCCCEEEEEEc
Confidence            998                            899999888875

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.54  E-value=9e-14  Score=118.43  Aligned_cols=113  Identities=17%  Similarity=0.128  Sum_probs=81.1

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.||.|.|+|++++++||+++|||++..+..      ..+++....+.....+.+...       ...++.|++|.|
T Consensus         9 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~-------~~~g~~~~af~v   75 (339)
T 3lm4_A            9 IAHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEA-------PEAGMGHAAMRT   75 (339)
T ss_dssp             EEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEEC-------SSCEEEEEEEEE
T ss_pred             CcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeC-------CCCCcceEEEEe
Confidence            3578999999999999999999999999887632      123333322212344444322       134789999999


Q ss_pred             CC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          198 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       198 ~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +|   ++++.++|    +++|+++...|..  .+.++.++|+|||||.|||+...
T Consensus        76 ~~~~dld~~~~~l----~~~G~~~~~~~~~--~~~~~~~~f~DPdG~~iel~~~~  124 (339)
T 3lm4_A           76 SSPEALERRAKSL----TDGNVDGTWSEDQ--FGYGKTFEYQSPDGHNLQLLWEA  124 (339)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCEEEECCS--TTBCCEEEEECTTCCEEEEECCB
T ss_pred             CCHHHHHHHHHHH----HHCCCceeeccCC--CCceEEEEEECCCCCEEEEEEee
Confidence            98   44445555    8999999876652  23458899999999999998764

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.54  E-value=6.7e-14  Score=108.91  Aligned_cols=96  Identities=36%  Similarity=0.659  Sum_probs=73.6

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCc---------------eeEEEEEeecCC
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQS---------------YFVVELTYNYGV   84 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~l~~~~~~   84 (258)
                      ..++++||+|.|+|++++++||+++|||++..+...+.+.+..++++.+....               ...++|......
T Consensus        31 ~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  110 (187)
T 3vw9_A           31 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGT  110 (187)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTG
T ss_pred             ceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCC
Confidence            35899999999999999999999999999988766566678888888654211               246778655432


Q ss_pred             C-----ccc----CCCCeeeEEEEcCC-------------------------------CCCCcEEEEEECC
Q 025083           85 T-----SYD----IGTGFGHLAIATED-------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        85 ~-----~~~----~~~~~~hia~~v~d-------------------------------DP~G~~iel~~~~  115 (258)
                      .     .+.    ...++.|++|.|+|                               ||+|+.|||++..
T Consensus       111 ~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          111 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGG
T ss_pred             CCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEcc
Confidence            1     111    12488999999998                               9999999999864

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.54  E-value=4.3e-14  Score=103.21  Aligned_cols=80  Identities=24%  Similarity=0.411  Sum_probs=58.3

Q ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcc-------cCCC
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY-------DIGT   91 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-------~~~~   91 (258)
                      +|+++++||+|.|+|++++++||+++|||++..+...++.....+++..++    ..+++.........       ..+.
T Consensus         1 sm~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~   76 (134)
T 3rmu_A            1 SMLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGN----TKMELLHPLGLDSPIAGFLQKNKAG   76 (134)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSS----SEEEEEEECSTTCTTHHHHHHCTTC
T ss_pred             CccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCC----EEEEEEecCCCCchhhhhhhccCCC
Confidence            368899999999999999999999999999886644333345667776542    34666654432211       2345


Q ss_pred             CeeeEEEEcCC
Q 025083           92 GFGHLAIATED  102 (258)
Q Consensus        92 ~~~hia~~v~d  102 (258)
                      ++.|++|.|+|
T Consensus        77 g~~hi~~~v~d   87 (134)
T 3rmu_A           77 GMHHICIEVDN   87 (134)
T ss_dssp             EEEEEEEEESC
T ss_pred             CceEEEEEcCC
Confidence            88999999998

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.54  E-value=7.4e-14  Score=117.13  Aligned_cols=116  Identities=17%  Similarity=0.160  Sum_probs=82.2

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.|+.|.|+|++++.+||+++|||++......  +   .+++..+.......+.+.  ..     ...+..|++|.|
T Consensus         5 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~--~---~~~l~~~~~~~~~~l~~~--~~-----~~~~~~~~~f~v   72 (307)
T 1mpy_A            5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--G---RVYLKAWTEVDKFSLVLR--EA-----DEPGMDFMGFKV   72 (307)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--S---CEEEECTTCCBSCSEEEE--EC-----SSCEEEEEEEEE
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC--C---cEEEEecCCCCceEEEEc--cC-----CCCCcceEEEEe
Confidence            35789999999999999999999999998875421  1   134443221112233332  11     124788999999


Q ss_pred             ---CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          198 ---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       198 ---~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                         +|++++++++    +++|+++...|.....+.++.++|+|||||.|||++..
T Consensus        73 ~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (307)
T 1mpy_A           73 VDEDALRQLERDL----MAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADK  123 (307)
T ss_dssp             SCHHHHHHHHHHH----HHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             CCHHHHHHHHHHH----HHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcc
Confidence               6777777777    89999988766422222458899999999999999864

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.53  E-value=1e-13  Score=113.09  Aligned_cols=114  Identities=15%  Similarity=0.253  Sum_probs=80.1

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      ...++.||+|.|+|++++.+||+++|||++..+..      ..+++..+    ...+.|.....     .+.+..|++|.
T Consensus        23 ~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g----~~~l~l~~~~~-----~~~~~~hiaf~   87 (252)
T 3pkv_A           23 HMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLG----VSQIQFRAAAD-----GTKPFYHIAIN   87 (252)
T ss_dssp             --CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEET----TEEEEEEECCT-----TCCCCCEEEEE
T ss_pred             cCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeC----CEEEEEEECCC-----CCCCeeEEEEE
Confidence            45789999999999999999999999999877642      12445543    24555543321     23468899999


Q ss_pred             ECC--hHHHHHHHHHHHHHhCCeeecC-Ccc---CCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          197 TDD--VYKSAEVVNLVTQELGGKITRQ-PGP---IPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       197 v~d--~~~~~~~l~~~~~~~G~~i~~~-p~~---~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      |++  ++++.++|    +++ +++..+ +..   ...++.+.+||+|||||.|||++...
T Consensus        88 V~~~dld~~~~rL----~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           88 IAANHFQEGKAWL----SGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             ECTTCHHHHHHHH----TTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             ecHHHHHHHHHHH----Hhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            975  55555555    888 887652 211   12335689999999999999998653

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.53  E-value=1.9e-14  Score=108.81  Aligned_cols=98  Identities=15%  Similarity=0.101  Sum_probs=62.5

Q ss_pred             CcccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc-----ccCC
Q 025083           16 WPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-----YDIG   90 (258)
Q Consensus        16 ~~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~~~   90 (258)
                      ..++..|||+|++|.|+|+++|++||+++|||++..+...++  .+.+.+..........+.+........     ...+
T Consensus        19 ~~~~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   96 (155)
T 4g6x_A           19 YFQSNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVA   96 (155)
T ss_dssp             ----CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHH
T ss_pred             eeccCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCcccccccccccc
Confidence            344456899999999999999999999999999876654332  233333332222222222222111110     1123


Q ss_pred             CCeeeEEEEcCC-------------------------------CCCCcEEEEEECC
Q 025083           91 TGFGHLAIATED-------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        91 ~~~~hia~~v~d-------------------------------DP~G~~iel~~~~  115 (258)
                      .+..|++|.|+|                               |||||.|||++..
T Consensus        97 ~g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A           97 DGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             TTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC-
T ss_pred             CCceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEEC
Confidence            577899999998                               9999999999864

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.53  E-value=8.1e-14  Score=105.94  Aligned_cols=95  Identities=22%  Similarity=0.398  Sum_probs=71.9

Q ss_pred             ccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcc------cCCC
Q 025083           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY------DIGT   91 (258)
Q Consensus        18 ~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~------~~~~   91 (258)
                      ..++++++||+|.|+|+++|++||+++|||++..+...++.....+++..++    ..++|.........      ..+.
T Consensus         3 ~~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~~   78 (161)
T 3oa4_A            3 AEKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGE----SKIELLEPLSEESPIAKFIQKRGE   78 (161)
T ss_dssp             --CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETT----EEEEEEEESSTTSHHHHHHHHHCS
T ss_pred             ccccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCC----eEEEEEeECCCCChHHHHhhcCCC
Confidence            3457899999999999999999999999999887654444445677776542    45777765433211      2356


Q ss_pred             CeeeEEEEcCC-----------------------------------CCCCcEEEEEECCC
Q 025083           92 GFGHLAIATED-----------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus        92 ~~~hia~~v~d-----------------------------------DP~G~~iel~~~~~  116 (258)
                      |+.|+||.|+|                                   ||+|+.|||++..+
T Consensus        79 g~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           79 GIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             CeEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCC
Confidence            89999999998                                   99999999998864

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.52  E-value=1.2e-13  Score=101.28  Aligned_cols=80  Identities=23%  Similarity=0.198  Sum_probs=57.5

Q ss_pred             ccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeee-ccCCCCeEEEEeccCCCCceeEEEEEeecCCCcc-----cCCC
Q 025083           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKR-DVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY-----DIGT   91 (258)
Q Consensus        18 ~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-----~~~~   91 (258)
                      ..|+++++||+|.|+|+++|++||+ +|||++..+. ..+......+++..+    ...++|..+......     ..+.
T Consensus         2 ~~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~   76 (133)
T 3hdp_A            2 SHMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGS   76 (133)
T ss_dssp             CCCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSC
T ss_pred             CccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCC
Confidence            3578999999999999999999999 9999987542 223334466666653    246777765432211     1156


Q ss_pred             CeeeEEEEcCC
Q 025083           92 GFGHLAIATED  102 (258)
Q Consensus        92 ~~~hia~~v~d  102 (258)
                      |+.|+||.|+|
T Consensus        77 g~~hiaf~v~d   87 (133)
T 3hdp_A           77 TPYHICYEVED   87 (133)
T ss_dssp             EEEEEEEEESC
T ss_pred             ceEEEEEEcCC
Confidence            88899999998

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.52  E-value=9.5e-14  Score=107.84  Aligned_cols=115  Identities=35%  Similarity=0.605  Sum_probs=77.7

Q ss_pred             CCCCCccccchhhcc--------CcccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCC--
Q 025083            1 MAEASPAAANAELLE--------WPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPE--   70 (258)
Q Consensus         1 ~~~~~~~~~~~~~~~--------~~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--   70 (258)
                      |||+.|+.||.....        -....+++++|+.|.|+|++++++||+++|||++......++..+..++++.+..  
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~   80 (184)
T 2za0_A            1 MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKND   80 (184)
T ss_dssp             ---CCCCCCCCCHHHHHHTCCCCCGGGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGG
T ss_pred             CCCCCcccCCcchhhhhcccCCcCCCccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEeccccccc
Confidence            788888887654322        2223478999999999999999999999999998866433333456666664320  


Q ss_pred             -------------CceeEEEEEeecCCC-----ccc----CCCCeeeEEEEcCC--------------------------
Q 025083           71 -------------QSYFVVELTYNYGVT-----SYD----IGTGFGHLAIATED--------------------------  102 (258)
Q Consensus        71 -------------~~~~~l~l~~~~~~~-----~~~----~~~~~~hia~~v~d--------------------------  102 (258)
                                   .....|+|.......     .+.    ...++.|++|.|+|                          
T Consensus        81 ~~~~~~~~~~~~~~~~~~l~L~~~~~~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~  160 (184)
T 2za0_A           81 IPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG  160 (184)
T ss_dssp             SCSSHHHHHHHHTTSSSEEEEEEETTGGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT
T ss_pred             CCcccchheeeecCCCceEEEEecCCCCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCcee
Confidence                         023467776543210     111    12578899999998                          


Q ss_pred             -----CCCCcEEEEEECC
Q 025083          103 -----DPDGYIFELIQRG  115 (258)
Q Consensus       103 -----DP~G~~iel~~~~  115 (258)
                           ||+|+.|||++..
T Consensus       161 ~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          161 LAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             CEEEECTTCCEEEEECTT
T ss_pred             EEEEECCCCCEEEEEecC
Confidence                 9999999999865

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.51  E-value=1.4e-13  Score=116.50  Aligned_cols=114  Identities=22%  Similarity=0.209  Sum_probs=81.9

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE-
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST-  197 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v-  197 (258)
                      .++.|+.|.|+|++++.+||+++|||++..+..    +  .+++.......+..+.+...       ...+..|++|.| 
T Consensus        16 ~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~--~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~~f~v~   82 (323)
T 1f1u_A           16 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----N--TIYLRSLEEFIHHNLVLRQG-------PIAAVAAFAYRVK   82 (323)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----S--EEEEECTTCCSSCSEEEEEC-------SSCEEEEEEEEES
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC----C--EEEEEecCCCCcEEEEEEEC-------CCCCeeEEEEEeC
Confidence            578999999999999999999999999876532    1  23344222212345555432       124788999999 


Q ss_pred             --CChHHHHHHHHHHHHHhCCeeecCCc-cCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          198 --DDVYKSAEVVNLVTQELGGKITRQPG-PIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       198 --~d~~~~~~~l~~~~~~~G~~i~~~p~-~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                        +|+++++++|    +++|+++...|. ..++ .++.++|+||+||.|||++...
T Consensus        83 ~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~-~g~~~~~~DP~G~~iel~~~~~  133 (323)
T 1f1u_A           83 SPAEVDAAEAYY----KELGCRTERRKEGFTKG-IGDSVRVEDPLGFPYEFFYETE  133 (323)
T ss_dssp             SHHHHHHHHHHH----HHTTCCEEEETTCSSTT-BCSEEEEECTTSCEEEEECCBC
T ss_pred             CHHHHHHHHHHH----HhCCCcEEeccccccCC-cceEEEEECCCCCEEEEEEecc
Confidence              5566666666    899999987765 2222 4578999999999999997653

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.50  E-value=3.9e-13  Score=98.01  Aligned_cols=90  Identities=29%  Similarity=0.469  Sum_probs=66.1

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEee-------cCCC---ccc-
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN-------YGVT---SYD-   88 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-------~~~~---~~~-   88 (258)
                      ++++++||+|.|+|++++++||+++|||++..+...++.....+++..++    ..++|..+       ....   ... 
T Consensus         2 ~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~~   77 (134)
T 3l7t_A            2 KLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGD----IELEIFGNKLTDSNYCAPPERISWPR   77 (134)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETT----EEEEEEECCTTSTTCCCCCCCCCSSS
T ss_pred             ceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCC----eEEEEEecccccccccCCccccCCCC
Confidence            36899999999999999999999999999987655444443455565432    35666652       1111   111 


Q ss_pred             CCCCeeeEEEEcCC--------------------------------CCCCcEEEEEE
Q 025083           89 IGTGFGHLAIATED--------------------------------DPDGYIFELIQ  113 (258)
Q Consensus        89 ~~~~~~hia~~v~d--------------------------------DP~G~~iel~~  113 (258)
                      .+.++.|++|.|+|                                ||+|+.|||++
T Consensus        78 ~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           78 EACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             CCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            34578899999998                                99999999975

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.50  E-value=1.6e-13  Score=99.50  Aligned_cols=78  Identities=21%  Similarity=0.329  Sum_probs=57.6

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCC--cccCCCCeeeEEEE
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT--SYDIGTGFGHLAIA   99 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~~~~hia~~   99 (258)
                      |+++||+|.|+|++++++||+++|||++......++..+..+++..++   ...++|.......  +...+.++.|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            789999999999999999999999999987644334445677776532   3467776554322  12245678999999


Q ss_pred             cCC
Q 025083          100 TED  102 (258)
Q Consensus       100 v~d  102 (258)
                      |+|
T Consensus        79 v~d   81 (127)
T 3e5d_A           79 TGT   81 (127)
T ss_dssp             CSS
T ss_pred             cCC
Confidence            987

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.49  E-value=1.3e-13  Score=115.00  Aligned_cols=112  Identities=15%  Similarity=0.160  Sum_probs=80.9

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .+|.|+.|.|+|++++.+||+++|||++......      .+++..+..  ...+.+...       ...++.|++|.|+
T Consensus         3 ~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~--~~~l~~~~~-------~~~~~~~~~f~v~   67 (297)
T 1lgt_A            3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSR--AWRIAVQQG-------EVDDLAFAGYEVA   67 (297)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEESSSB--SCSEEEEEC-------TTCEEEEEEEEES
T ss_pred             eEEEEEEEEcCCHHHHHHHHHHccCCEEeecCCC------eEEEEeCCC--cEEEEEecC-------CCCCccEEEEEeC
Confidence            4689999999999999999999999998875421      233443321  233433321       1347889999999


Q ss_pred             ---ChHHHHHHHHHHHHHhCCeeecCCccC--CCCCeeEEEEECCCCCEEEEEcch
Q 025083          199 ---DVYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       199 ---d~~~~~~~l~~~~~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                         |+++++++|    +++|+++...|...  ..+..+.+||+|||||.|||++..
T Consensus        68 ~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (297)
T 1lgt_A           68 DAAGLAQMADKL----KQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (297)
T ss_dssp             SHHHHHHHHHHH----HHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CHHHHHHHHHHH----HHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECc
Confidence               777777777    89999987655321  112358899999999999999865

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.48  E-value=1.5e-13  Score=114.39  Aligned_cols=113  Identities=16%  Similarity=0.151  Sum_probs=80.2

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..+|.|+.|.|+|++++.+||+++|||++..+..   +   .+++..+..  ...+.+..  .     ...+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~---~~~l~~~~~--~~~l~~~~--~-----~~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG---D---AALYRADQR--AWRIAVQP--G-----ELDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET---T---EEEEESSSB--SCSEEEEE--C-----TTCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC---C---eEEEEcCCc--eEEEEEcc--C-----CCCCccEEEEEE
Confidence            3578999999999999999999999999877542   1   123343322  22333321  1     124688999999


Q ss_pred             C---ChHHHHHHHHHHHHHhCCeeecCCccC--CCCCeeEEEEECCCCCEEEEEcch
Q 025083          198 D---DVYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       198 ~---d~~~~~~~l~~~~~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +   |+++++++|    +++|+++..+|...  ..+..++++|+|||||.|||++..
T Consensus        67 ~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (292)
T 1kw3_B           67 DDAAALERMADKL----RQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (292)
T ss_dssp             SSHHHHHHHHHHH----HHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHH----HHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECc
Confidence            8   666666666    89999987765421  012357899999999999999765

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.48  E-value=1.9e-13  Score=114.21  Aligned_cols=112  Identities=12%  Similarity=0.078  Sum_probs=79.1

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEee-eecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLR-TIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      ..+|.|+.|.|+|++++++||+++|||++.. +..   +   .+++..+..  ...+.+...       ...+..|++|.
T Consensus         3 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~---~~~~~~~~~--~~~l~l~~~-------~~~~~~~~~~~   67 (300)
T 2zyq_A            3 IRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE---G---ALYLRMDDF--PARLVVVPG-------EHDRLLEAGWE   67 (300)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS---S---CEEEESSSS--SCSEEEEEC-------SSCEEEEEEEE
T ss_pred             cceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC---C---eEEEEeCCC--cEEEEEecC-------CCCCcceEEEE
Confidence            3578999999999999999999999999876 321   1   133443332  234444321       13478899999


Q ss_pred             ECC---hHHHHHHHHHHHHHhCCeeecCCccC--CCCCeeEEEEECCCCCEEEEEcc
Q 025083          197 TDD---VYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       197 v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      |+|   +++++++|    +++|+++..+|...  ..+..+.+||+|||||.|||++.
T Consensus        68 v~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           68 CANAEGLQEIRNRL----DLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             CSSHHHHHHHHHHH----HHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             eCCHHHHHHHHHHH----HHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            987   44455555    89999987665431  11235889999999999999987

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.46  E-value=1.6e-13  Score=115.12  Aligned_cols=113  Identities=14%  Similarity=0.111  Sum_probs=81.1

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.|+.|.|+|++++++||+++|||++.....  . +  .+++..+..  +..+.+...       ...+..|++|.|
T Consensus         4 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~-~--~~~~~~~~~--~~~l~l~~~-------~~~~~~~~~f~v   69 (305)
T 2wl9_A            4 VTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--D-D--RIYLRMDRW--HHRIVLHAD-------GSDDLAYIGWRV   69 (305)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--T-T--EEEEECSSB--SCSEEEECS-------SCCEEEEEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--C-C--eEEEEeCCC--eEEEEEEEC-------CCCCeEEEEEEE
Confidence            4679999999999999999999999999876211  1 1  233443332  344555421       134788999999


Q ss_pred             CC---hHHHHHHHHHHHHHhCCeeecCCccC--CCCCeeEEEEECCCCCEEEEEcc
Q 025083          198 DD---VYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~d---~~~~~~~l~~~~~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      ++   +++++++|    +++|+++..+|...  ..+..+.+||+|||||.|||++.
T Consensus        70 ~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           70 AGPVELDELAEQL----KNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             CCHHHHHHHHHHH----HHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            84   66666666    89999988766432  12345889999999999999876

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.46  E-value=2.8e-12  Score=94.70  Aligned_cols=115  Identities=15%  Similarity=0.122  Sum_probs=76.4

Q ss_pred             eeEEec--ChhhHHHHHHHhc-CCeEeee--ecC----CccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEE
Q 025083          124 VMLRVG--DLGRSIKFYEKAL-GMKLLRT--IDS----PELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVA  194 (258)
Q Consensus       124 v~l~v~--d~~~s~~FY~~~l-G~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  194 (258)
                      ..|.+.  |+++|++||+++| |+++...  ...    +++....+.+..++    ..+.+...........+. ...++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g----~~~~~~~~~~~~~~~~~~-~~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD----QSVHCIDSHVRHAFDFTP-AFSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT----EEEEEEEESSCCSCCCCT-TEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECC----EEEEEECCCCCCCCCCCC-ceEEE
Confidence            668887  9999999999999 9998752  211    11222233344322    223222221001111122 34699


Q ss_pred             EEECC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          195 ISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       195 ~~v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |.|+|   ++++++++    + +|+++..+|...++ +.++++|+||+|+.|+|..+.
T Consensus        84 ~~v~d~~evd~~~~~l----~-~Gg~v~~p~~~~~~-G~~~~~~~Dp~G~~w~l~~~~  135 (136)
T 1u7i_A           84 VDCESNAQIERLAEAL----S-DGGKALMPLGDYGF-SQRFAWLADRFGVSWQLNLAG  135 (136)
T ss_dssp             EECCCHHHHHHHHHHH----H-TTSEEEEEEECCSS-SSEEEEEECTTSCEEEEEECC
T ss_pred             EEcCCHHHHHHHHHHH----H-cCCEEecccccCCC-cceEEEEECCCCCEEEEEecC
Confidence            99999   77777777    8 99999999888766 458899999999999998753

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.45  E-value=2.2e-13  Score=114.08  Aligned_cols=113  Identities=13%  Similarity=0.027  Sum_probs=78.8

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.|+.|.|+|++++.+||+++|||++..+..  .+   ..++..+.  .+..+.+...       ...+..|++|.|
T Consensus         7 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~---~~~~~~~~--~~~~l~l~~~-------~~~~~~~~~~~v   72 (302)
T 2ehz_A            7 VIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KD---RFYLRMDY--WHHRIVVHHN-------GQDDLEYLGWRV   72 (302)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--SS---EEEEESSS--BSCSEEEESS-------CCSEEEEEEEEE
T ss_pred             ccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--Cc---ceEEEeCC--CceEEEEecC-------CCCCeeEEEEEE
Confidence            3578999999999999999999999999876431  11   22333322  1334444311       124788999999


Q ss_pred             CC---hHHHHHHHHHHHHHhCCeeecCCccCC--CCCeeEEEEECCCCCEEEEEcc
Q 025083          198 DD---VYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      .+   +++++++|    +++|+++..+|...+  .+.++.+||+|||||.|||++.
T Consensus        73 ~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           73 AGKPEFEALGQKL----IDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             CCHHHHHHHHHHH----HHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence            64   55555555    999999877654321  1235889999999999999975

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.45  E-value=6.5e-13  Score=96.93  Aligned_cols=94  Identities=18%  Similarity=0.207  Sum_probs=65.5

Q ss_pred             ccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEE
Q 025083           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLA   97 (258)
Q Consensus        18 ~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia   97 (258)
                      ..|+++++||.|.|+|++++++||+++|||++......+++ ...+.+..+  .....+.+.............+..|++
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~--~~~~~l~l~~~~~~~~~~~~~~~~~~~   84 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPP--GAQTQVALGLPSWYEDGRKPGGYTGIS   84 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECT--TCSCEEEEECGGGCSSCCCSCEEEEEE
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECC--CCceEEEEecCcccccccCCCCeEEEE
Confidence            45678999999999999999999999999999876532222 233444432  233456665433211112234678999


Q ss_pred             EEcCC--------------------------------CCCCcEEEEEEC
Q 025083           98 IATED--------------------------------DPDGYIFELIQR  114 (258)
Q Consensus        98 ~~v~d--------------------------------DP~G~~iel~~~  114 (258)
                      |.|+|                                ||+|+.|||++.
T Consensus        85 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           85 LITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             EEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEEC
T ss_pred             EEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEeC
Confidence            99998                                999999999863

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.45  E-value=9.9e-13  Score=97.23  Aligned_cols=97  Identities=16%  Similarity=0.308  Sum_probs=71.2

Q ss_pred             cCcccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCee
Q 025083           15 EWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFG   94 (258)
Q Consensus        15 ~~~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~   94 (258)
                      .|++ |.....||+|.|+|++++++||+++|||++..+... .+.+..++++.+.  ....+++....+..+...+.+..
T Consensus         4 ~~~~-m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~   79 (139)
T 1twu_A            4 RFSS-FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDS   79 (139)
T ss_dssp             BCSS-CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTC
T ss_pred             cCCC-CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCC--CceEEEEeecCCCCCCCCCCCcc
Confidence            3887 667778899999999999999999999998765432 2345667776532  33457776543322233345778


Q ss_pred             eEEEEcCC----------------------------------CCCCcEEEEEECC
Q 025083           95 HLAIATED----------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        95 hia~~v~d----------------------------------DP~G~~iel~~~~  115 (258)
                      |++|.|+|                                  ||||+.|||++..
T Consensus        80 hi~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           80 LLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             EEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             EEEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCCeEEECCCCCEEEEEEcC
Confidence            99999988                                  9999999999763

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.45  E-value=3.2e-12  Score=95.94  Aligned_cols=115  Identities=16%  Similarity=0.129  Sum_probs=75.9

Q ss_pred             eeeEEec-ChhhHHHHHHHhcCCeEeeeecCCc------------cceeEEEeeecCCCceeEEEEEEecCCc-ccccCC
Q 025083          123 QVMLRVG-DLGRSIKFYEKALGMKLLRTIDSPE------------LKCALAMLGYAEEDQTTVLELAYSYGVT-EYTKGN  188 (258)
Q Consensus       123 hv~l~v~-d~~~s~~FY~~~lG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~  188 (258)
                      ...|.|. |+++|++||+++||+++.......+            +....+.+..++    ..+.+.... +. ..+...
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~----~~l~~~d~~-~~~~~~~~~   80 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGS----FALMASDNH-PAYPYEGIK   80 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETT----EEEEEEECC-TTSCCCCCC
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECC----EEEEEEcCC-CccCCCCCC
Confidence            4778888 9999999999999999875421111            222223344322    233333221 11 111223


Q ss_pred             ceeeEEEEECC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          189 AYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       189 g~~hi~~~v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      | .+++|.|+|   +++++++|    + +|+++..+|...++ +.++++|+||+|+.|+|++..
T Consensus        81 g-~~l~~~v~d~~evd~~~~~l----~-~Gg~i~~p~~~~~w-G~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           81 G-CSISLNVDSKAEAERLFNAL----A-EGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             S-EEEEEECSSHHHHHHHHHHH----H-TTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESC
T ss_pred             c-eEEEEEcCCHHHHHHHHHHH----H-CCCEEeecccccCc-ccceEEEECCCCCEEEEEEec
Confidence            4 479999999   45555555    5 79999998887765 458899999999999999754

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.45  E-value=1.1e-12  Score=97.63  Aligned_cols=84  Identities=23%  Similarity=0.316  Sum_probs=58.8

Q ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCC--CceeEEEEEeecCCCcc------cCC
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPE--QSYFVVELTYNYGVTSY------DIG   90 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~l~~~~~~~~~------~~~   90 (258)
                      .|+++++||.|.|+|++++++||+++|||++......++.....+++..++.  ..+..|+|.........      ..+
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            4678999999999999999999999999998866443333445666665431  01245777665432211      223


Q ss_pred             --CCeeeEEEEcCC
Q 025083           91 --TGFGHLAIATED  102 (258)
Q Consensus        91 --~~~~hia~~v~d  102 (258)
                        .++.|++|.|+|
T Consensus        85 ~~~g~~h~~~~v~d   98 (148)
T 1jc4_A           85 GRAGLHHMAWRVDD   98 (148)
T ss_dssp             TCCEEEEEEEECSC
T ss_pred             CCCceEEEEEECCC
Confidence              578899999998

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.45  E-value=9.8e-13  Score=110.62  Aligned_cols=115  Identities=19%  Similarity=0.226  Sum_probs=81.6

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..++.|+.|.|+|++++.+||+++|||++.....    +  .+++..+.......+.|...       ...+..|++|.|
T Consensus         6 i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~----~--~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~~~~v   72 (310)
T 3b59_A            6 VTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA----N--NAWFKAQGADEHHVVQLRRA-------DENRIDVIALAA   72 (310)
T ss_dssp             EEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS----S--EEEEECTTSCCSCSEEEEEC-------SSCEEEEEEEEE
T ss_pred             cceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC----C--eEEEEECCCCCCEEEEEEEC-------CCCCeeEEEEEe
Confidence            3578999999999999999999999999876532    1  23344332101345555432       134788999999


Q ss_pred             ---CChHHHHHHHHHHHHHhCCeeecCCccC-CCCCeeEEEEECCCCCEEEEEcch
Q 025083          198 ---DDVYKSAEVVNLVTQELGGKITRQPGPI-PGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       198 ---~d~~~~~~~l~~~~~~~G~~i~~~p~~~-~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                         +|+++++++|    +++|+++..+|... ..++++.++|+||+||.|||++..
T Consensus        73 ~~~~dld~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  124 (310)
T 3b59_A           73 DSRSDVDALRASV----EAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDV  124 (310)
T ss_dssp             SSHHHHHHHHHHH----HHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHH----HhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcc
Confidence               4566666666    89999998776541 122457889999999999998765

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.45  E-value=3.4e-13  Score=102.09  Aligned_cols=91  Identities=24%  Similarity=0.350  Sum_probs=67.6

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccC--------------CCCeEEEEeccCCCCceeEEEEEeecCCC
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--------------EEKYSNAFLGFGPEQSYFVVELTYNYGVT   85 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~   85 (258)
                      ++++++||+|.|+|++++++||+++|||++..+...+              +.....+++..+    ...++|.......
T Consensus        16 ~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~~~~~~~   91 (159)
T 3gm5_A           16 DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELIEPDENP   91 (159)
T ss_dssp             CGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEEEECSSS
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEEEECCCC
Confidence            4789999999999999999999999999976543322              133456666653    2467887654322


Q ss_pred             c-c-----cCCCCeeeEEEEcCC------------------------------CCC--CcEEEEEEC
Q 025083           86 S-Y-----DIGTGFGHLAIATED------------------------------DPD--GYIFELIQR  114 (258)
Q Consensus        86 ~-~-----~~~~~~~hia~~v~d------------------------------DP~--G~~iel~~~  114 (258)
                      . .     ..+.|+.|+||.|+|                              |||  |+.|||+++
T Consensus        92 ~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           92 STWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             CHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEE
T ss_pred             ChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccCCeeEEEEeccccCcEEEEEEec
Confidence            1 1     135689999999998                              888  999999875

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.42  E-value=2.5e-12  Score=94.60  Aligned_cols=92  Identities=23%  Similarity=0.350  Sum_probs=66.9

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCC--Ccc-cCCCCeeeE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--TSY-DIGTGFGHL   96 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~~-~~~~~~~hi   96 (258)
                      ++++++||.|.|+|++++++||+++|||++..+...+++.+..+++. +    ...++|......  ... ..+.+..|+
T Consensus         2 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h~   76 (136)
T 2rk0_A            2 SLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDHL   76 (136)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEEE
T ss_pred             CCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcceE
Confidence            47899999999999999999999999999887654332234555555 2    245677654332  111 234578899


Q ss_pred             EEEcC---C------------------------------CCCCcEEEEEECCC
Q 025083           97 AIATE---D------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus        97 a~~v~---d------------------------------DP~G~~iel~~~~~  116 (258)
                      +|.|+   |                              ||||+.||+++..+
T Consensus        77 ~f~v~~~~d~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           77 SFSVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EEEESSHHHHHHHHHHHHHHTCCBCCCEEETTEEEEEEECTTCCEEEEEEECT
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCcccCccccCCceEEEEECCCCCEEEEEEcCC
Confidence            99994   3                              99999999998753

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.41  E-value=3.3e-12  Score=106.33  Aligned_cols=117  Identities=15%  Similarity=0.151  Sum_probs=80.4

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC-
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD-  198 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~-  198 (258)
                      ...++.+.|+|+++|.+||+++|||+.......+ +.+  ..+..++......+.+.....    ..+....+++|.|+ 
T Consensus       183 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~  255 (301)
T 2zw5_A          183 LAVITELPVRDVAATLRLVEAALGARTAFAIGDP-PEF--AEAALTPWSAGPRFRLAAVPG----PGPVEPVRLHLDAAG  255 (301)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EEE--EEEESSSSSSSSEEEEEECCC----SSCCCCCEEEEEEES
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-ccE--EEEEcCCCccccccccccCCC----cCCCCceEEEEEcCc
Confidence            3457889999999999999999999987543222 222  234333211012222211110    11223567999999 


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      |++++++++    +++|+++..+|...++ +.+.++|+|||||.|+|.++
T Consensus       256 dvd~~~~~~----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          256 TADSLHRRA----VDAGARVDGPPVRRPW-GRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             CHHHHHHHH----HHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             cHHHHHHHH----HHcCCccccCcccCCC-cceEEEEECCCCCEEEeeCC
Confidence            999999999    8999999888766654 35889999999999999874

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.41  E-value=1.7e-12  Score=93.68  Aligned_cols=89  Identities=29%  Similarity=0.457  Sum_probs=61.8

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCC-CCeEEEEeccCCCCceeEEEEEeecCCC---cccCCCCeee
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGVT---SYDIGTGFGH   95 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~h   95 (258)
                      |+++++|+.|.|+|++++++||+++|||++..+...++ +.+. +++..++  .  .++|.......   ....+.+..|
T Consensus         2 ~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~-~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~g~~~   76 (126)
T 2p25_A            2 FFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIK-LDLKLGS--Q--ELEIFISDQFPARPSYPEALGLRH   76 (126)
T ss_dssp             TTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEE-EEEEETT--E--EEEEEECTTCCCCCCSSCCSSCCC
T ss_pred             cccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceE-EEEecCC--e--EEEEEeccCCCCCCCCCCCccceE
Confidence            57899999999999999999999999999876532222 2222 3344332  2  56665432211   1122457789


Q ss_pred             EEEEcCC--------------------------------CCCCcEEEEEE
Q 025083           96 LAIATED--------------------------------DPDGYIFELIQ  113 (258)
Q Consensus        96 ia~~v~d--------------------------------DP~G~~iel~~  113 (258)
                      ++|.|+|                                ||+|+.|||++
T Consensus        77 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           77 LAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            9999998                                99999999874

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.40  E-value=2.5e-12  Score=111.16  Aligned_cols=124  Identities=17%  Similarity=0.223  Sum_probs=90.7

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCcc--ceeEEEeeecCCCceeEEEEEEecCCcc----------cc
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL--KCALAMLGYAEEDQTTVLELAYSYGVTE----------YT  185 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~~  185 (258)
                      ..+++||.|.|+|++++.+||+++|||++..+.....+  .....+++.+    ...+.|.....+..          ..
T Consensus        20 i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~   95 (381)
T 1t47_A           20 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAE   95 (381)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHHHHh
Confidence            57899999999999999999999999998876321111  2344555533    35566665322111          12


Q ss_pred             cCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCC--CCCeeEEEEECCCCCEEEEEcch
Q 025083          186 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       186 ~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      .+.++.|++|.|+|++++++++    +++|+++..+|....  .+..+.+.|+||+|+.++|+++.
T Consensus        96 ~g~gv~~iaf~V~D~~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A           96 HGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             cCCceEEEEEEECCHHHHHHHH----HHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            2678999999999999999999    899999988775321  21235788999999999999875

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.39  E-value=5.4e-12  Score=108.14  Aligned_cols=122  Identities=17%  Similarity=0.153  Sum_probs=89.2

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc------cccCCcee
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE------YTKGNAYA  191 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~g~~  191 (258)
                      ..++.||.|.|+|++++.+||+++|||++..+.....+  ...++..+    ...+.+.....+..      ...+.++.
T Consensus         3 i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~g~g~~   76 (357)
T 2r5v_A            3 NFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQG----QVTLVLTEPTSDRHPAAAYLQTHGDGVA   76 (357)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEET----TEEEEEEEESSTTSHHHHHHHHHSSEEE
T ss_pred             CceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeC----CEEEEEeCCCCCCCHHHHHHHhcCCeEE
Confidence            46799999999999999999999999998876432222  23334432    34566654322211      12356899


Q ss_pred             eEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          192 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       192 hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |++|.|+|++++++++    +++|+++..+|.....+..+.+.|+||+|..++|+++.
T Consensus        77 ~iaf~V~D~~~~~~~l----~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           77 DIAMATSDVAAAYEAA----VRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             EEEEEESCHHHHHHHH----HHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             EEEEEECCHHHHHHHH----HHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            9999999999999888    89999998777543333346888999999999999875

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.38  E-value=2.9e-12  Score=96.10  Aligned_cols=93  Identities=22%  Similarity=0.266  Sum_probs=65.6

Q ss_pred             ccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccC--------CCCeEEEEeccCCCCceeEEEEEeecCCC----
Q 025083           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP--------EEKYSNAFLGFGPEQSYFVVELTYNYGVT----   85 (258)
Q Consensus        18 ~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----   85 (258)
                      ..++++++||+|.|+|++++++||+++|||++..+...+        .+  ..+++..++   ...++|.......    
T Consensus        14 ~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~l~l~~~~~~~~~~~   88 (156)
T 3kol_A           14 PGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASG--KVANFITPD---GTILDLFGEPELSPPDP   88 (156)
T ss_dssp             TTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTT--SEEEEECTT---SCEEEEEECTTCCCSSS
T ss_pred             ccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCC--cEEEEEeCC---CCEEEEEecCCCCcCCC
Confidence            445789999999999999999999999999987632211        12  234444432   2356666543321    


Q ss_pred             -cccCCCCeeeEEEEcC--C-------------------------------CCCCcEEEEEECC
Q 025083           86 -SYDIGTGFGHLAIATE--D-------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        86 -~~~~~~~~~hia~~v~--d-------------------------------DP~G~~iel~~~~  115 (258)
                       +.....+..|++|.|+  |                               ||+||.|||++.+
T Consensus        89 ~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A           89 NPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             STTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEEECC
T ss_pred             CCCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEEecC
Confidence             1123457899999998  5                               9999999999875

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.35  E-value=1.1e-11  Score=92.60  Aligned_cols=93  Identities=18%  Similarity=0.211  Sum_probs=64.8

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeecc-----------CCCCeEEEEeccCCCCceeEEEEEeec--CCC-
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDV-----------PEEKYSNAFLGFGPEQSYFVVELTYNY--GVT-   85 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~l~~~~--~~~-   85 (258)
                      ++++++|+.|.|+|++++++||++ |||++......           +......+++..++  ....++|....  ... 
T Consensus         8 ~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--g~~~l~l~~~~~~~~~~   84 (153)
T 1ss4_A            8 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD--GHSRIELSRFLTPPTIA   84 (153)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT--SSCEEEEEEEEESCCCC
T ss_pred             cccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCC--CCcEEEEEEecCCCCcc
Confidence            578999999999999999999999 99998765321           11233556666532  22356665431  111 


Q ss_pred             ----cccCCCCeeeEEEEcCC--------------------------------CCCCcEEEEEECC
Q 025083           86 ----SYDIGTGFGHLAIATED--------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        86 ----~~~~~~~~~hia~~v~d--------------------------------DP~G~~iel~~~~  115 (258)
                          ....+.|+.|++|.|+|                                ||+|+.|||++..
T Consensus        85 ~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           85 DHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             BCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             cccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEecc
Confidence                11224577899999998                                9999999998754

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.32  E-value=8.8e-12  Score=90.33  Aligned_cols=89  Identities=17%  Similarity=0.232  Sum_probs=62.2

Q ss_pred             ccccceeeEEEEEe--CCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeee
Q 025083           18 KKDKRRFLHAVYRV--GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGH   95 (258)
Q Consensus        18 ~~~~~~~~hv~l~v--~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h   95 (258)
                      ..|+.+++||.|.|  +|++++++||+++|||++..+.....+. ..+++..++    ..+.|......    ...+..|
T Consensus         5 ~m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~~----~~l~l~~~~~~----~~~~~~~   75 (126)
T 2qqz_A            5 RNYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKR-GGCWFKCGN----QEIHIGVEQNF----NPAKRAH   75 (126)
T ss_dssp             CCCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGG-CCEEEEETT----EEEEEEECTTC----CCCSSSC
T ss_pred             hcccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCC-CceEEEeCC----EEEEEEecCCC----CCCCceE
Confidence            34678999999999  8999999999999999987653211000 123444432    24555543211    1246789


Q ss_pred             EEEEcCC------------------------------CCCCcEEEEEECC
Q 025083           96 LAIATED------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        96 ia~~v~d------------------------------DP~G~~iel~~~~  115 (258)
                      ++|.|+|                              ||+|+.|||+++.
T Consensus        76 ~~f~v~d~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           76 PAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEEEETTHHHHHHHHHHTTCCCEEECSSTTEEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHcCCCccCCCCCCCeeEEEEECCCCCEEEEEeCC
Confidence            9999998                              9999999998753

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.32  E-value=1.6e-11  Score=107.33  Aligned_cols=124  Identities=15%  Similarity=0.126  Sum_probs=89.9

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCC--ccceeEEEeeecCCCceeEEEEEEecCCc--------------
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--ELKCALAMLGYAEEDQTTVLELAYSYGVT--------------  182 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--------------  182 (258)
                      .++.||.|.|+|+++|.+||+++|||++.......  ...+...+++.+    ...+.|.....+.              
T Consensus        24 ~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~~~~~~~~p~   99 (424)
T 1sqd_A           24 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTTTASI   99 (424)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             CeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCccccccccccccccc
Confidence            47899999999999999999999999988764322  112344555532    3556666542221              


Q ss_pred             -----c------cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          183 -----E------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       183 -----~------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                           .      ...+.|+.|++|.|+|++++++++    +++|+++..+|....+ ..+...+++|+|+.++|+++...
T Consensus       100 ~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l----~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A          100 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             ccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHH----HHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCC
Confidence                 0      123468999999999999999999    8999999888754322 34667788888888888876543

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.32  E-value=2.7e-11  Score=88.21  Aligned_cols=85  Identities=24%  Similarity=0.367  Sum_probs=61.4

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCC---CcccCCCCeeeEE
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV---TSYDIGTGFGHLA   97 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~hia   97 (258)
                      +.+++|+.|.|+|++++++||+++|||++....   + .  .+++..++    ..+.+......   .....+.+..|++
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~   77 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A-G--RIALEFGH----QKINLHQLGNEFEPKAQNVRVGSADLC   77 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-T--EEEEEETT----EEEEEEETTSCCSSCCTTCCTTCCEEE
T ss_pred             ecccCEEEEEECCHHHHHHHHHHccCceEEEec---C-C--eEEEEcCC----EEEEEEcCCCCccccCCCCCCCccEEE
Confidence            679999999999999999999999999998652   1 1  23344332    34555443221   1112345779999


Q ss_pred             EEcCC------------------------------------CCCCcEEEEEECC
Q 025083           98 IATED------------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        98 ~~v~d------------------------------------DP~G~~iel~~~~  115 (258)
                      |.|+|                                    ||+|+.|||++..
T Consensus        78 ~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           78 FITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             EEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            99996                                    9999999999864

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.31  E-value=1.9e-11  Score=91.52  Aligned_cols=88  Identities=26%  Similarity=0.349  Sum_probs=61.1

Q ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCC---CcccCCCCeee
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV---TSYDIGTGFGH   95 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~h   95 (258)
                      .++.+++||.|.|+|++++++||+++|||++....   + .  .+++..++    ..+.|......   .......+..|
T Consensus        19 m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~--~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~g~~h   88 (152)
T 3huh_A           19 MIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-N--RKALIFGA----QKINLHQQEMEFEPKASRPTPGSAD   88 (152)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-T--EEEEEETT----EEEEEEETTBCCSSCCSSCCTTCCE
T ss_pred             cccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-C--eEEEEeCC----eEEEEeccCCcCCCcCcCCCCCccE
Confidence            44679999999999999999999999999998762   2 2  23444432    24555432211   11123457789


Q ss_pred             EEEEcC-C-----------------------------------CCCCcEEEEEECCC
Q 025083           96 LAIATE-D-----------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus        96 ia~~v~-d-----------------------------------DP~G~~iel~~~~~  116 (258)
                      ++|.+. |                                   |||||.|||++..+
T Consensus        89 i~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           89 LCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             EEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             EEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            999887 5                                   99999999998763

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.31  E-value=1.1e-11  Score=91.42  Aligned_cols=86  Identities=23%  Similarity=0.366  Sum_probs=60.6

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEE---EEeccCCCCceeEEEEEeecCCCcccCCCCeeeE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSN---AFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi   96 (258)
                      |+++++|+.|.|+|++++++||+++|||++......  ..+..   .++..++    ..+.+...... +   ..+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g~----~~l~l~~~~~~-~---~~~~~h~   70 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIGD----IWVAIMQGEKL-A---ERSYNHI   70 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEETT----EEEEEEECCCC-S---SCCSCEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEECC----EEEEEEeCCCC-C---CCCeeEE
Confidence            578999999999999999999999999998765321  11110   1333322    34666543211 1   3477899


Q ss_pred             EEEcC--C--------------------------------CCCCcEEEEEECC
Q 025083           97 AIATE--D--------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        97 a~~v~--d--------------------------------DP~G~~iel~~~~  115 (258)
                      +|.|+  |                                ||+||.||+++.+
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           71 AFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            99998  5                                9999999999754

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.30  E-value=2.8e-11  Score=89.76  Aligned_cols=83  Identities=20%  Similarity=0.302  Sum_probs=59.9

Q ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEE
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~   98 (258)
                      .++.+++||.|.|+|++++++||+++|||++.....  +..  .+++..+.  ....+.+....      ...+..|++|
T Consensus        24 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~--~~~~~~~~--~~~~l~l~~~~------~~~~~~h~~~   91 (141)
T 3ghj_A           24 MNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARR--WNFLWVSG--RAGMVVLQEEK------ENWQQQHFSF   91 (141)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTT--EEEEEETT--TTEEEEEEECC------SSCCCCEEEE
T ss_pred             eeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCc--EEEEEecC--CCcEEEEeccC------CCCCCceEEE
Confidence            347899999999999999999999999999987642  222  23444332  23456665431      1235689999


Q ss_pred             EcC--C--------------------------------CCCCcEEEEEE
Q 025083           99 ATE--D--------------------------------DPDGYIFELIQ  113 (258)
Q Consensus        99 ~v~--d--------------------------------DP~G~~iel~~  113 (258)
                      .|+  |                                |||||.|||+.
T Consensus        92 ~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           92 RVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EECGGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EEeHHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEE
Confidence            987  4                                99999999985

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.30  E-value=2.5e-11  Score=89.76  Aligned_cols=86  Identities=26%  Similarity=0.434  Sum_probs=61.6

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCC-cccCCCCeeeEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVT-SYDIGTGFGHLAI   98 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~~hia~   98 (258)
                      |+++++||.|.|+|++++++||+++|||++.....  .    .+++..++    ..+.|....... ......+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~hi~~   70 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T----GAYLTCGD----LWVCLSYDEARQYVPPQESDYTHYAF   70 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T----EEEEEETT----EEEEEEECTTCCCCCGGGSCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C----cEEEEECC----EEEEEEECCCCCCCCCCCCCceEEEE
Confidence            57899999999999999999999999999876542  1    23444432    245554432111 1122357789999


Q ss_pred             EcC--C-----------------------------CCCCcEEEEEECC
Q 025083           99 ATE--D-----------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        99 ~v~--d-----------------------------DP~G~~iel~~~~  115 (258)
                      .|+  |                             ||+|+.|||++..
T Consensus        71 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           71 TVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             ECCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEECC
T ss_pred             EeCHHHHHHHHHHHHHCCCeEeccCCCceeEEEEECCCCCEEEEEECc
Confidence            997  4                             9999999999864

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.30  E-value=2.3e-11  Score=89.28  Aligned_cols=84  Identities=25%  Similarity=0.379  Sum_probs=60.6

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~   99 (258)
                      |+++++||.|.|+|++++++||+++|||++.....  .    ..++..++    ..+.+......  .....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~~----~~l~l~~~~~~--~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELGS----LWLCLSREPQY--GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEETT----EEEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecCC----EEEEEEeCCCC--CCCCCCcceEEEE
Confidence            57899999999999999999999999999876532  1    23444332    24555543211  1223467899999


Q ss_pred             cC--C-----------------------------CCCCcEEEEEECC
Q 025083          100 TE--D-----------------------------DPDGYIFELIQRG  115 (258)
Q Consensus       100 v~--d-----------------------------DP~G~~iel~~~~  115 (258)
                      |+  |                             ||+||.||+++..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCCEEEEEECC
Confidence            97  4                             9999999998754

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.28  E-value=2.5e-11  Score=88.61  Aligned_cols=86  Identities=19%  Similarity=0.297  Sum_probs=59.2

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeE---EEEeccCCCCceeEEEEEeecCCCcccCCCCeeeE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYS---NAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi   96 (258)
                      |+++++|+.|.|+|++++++||+++|||++.....  +..+.   ..++..++    ..+.+......    ...+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~----~~l~l~~~~~~----~~~~~~h~   70 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIAG----LWICIMEGDSL----QERTYNHI   70 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEETT----EEEEEEECSSC----CCCCSCEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeCC----EEEEEecCCCC----CCCCeeEE
Confidence            57899999999999999999999999999876432  11111   01333322    34556543211    13577899


Q ss_pred             EEEcC--C--------------------------------CCCCcEEEEEECC
Q 025083           97 AIATE--D--------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        97 a~~v~--d--------------------------------DP~G~~iel~~~~  115 (258)
                      +|.|+  |                                ||+|+.||+++..
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           71 AFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence            99996  4                                9999999999865

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.26  E-value=1.4e-11  Score=93.34  Aligned_cols=88  Identities=23%  Similarity=0.346  Sum_probs=61.6

Q ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCC--------CcccCC
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV--------TSYDIG   90 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--------~~~~~~   90 (258)
                      .++.+++||.|.|+|++++++||+++|||++.....   +  ..+++..++    ..+.+......        .+...+
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~--~~~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~   74 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLP---G--QLVFFKCGR----QMLLLFDPQESSRADANNPIPRHGA   74 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEET---T--TEEEEEETT----EEEEEECHHHHTCCCTTCCSCCCEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecC---C--cEEEEeCCC----EEEEEEecCCccCccccCCCCcCCC
Confidence            346899999999999999999999999999987643   1  234444332    23444332111        111223


Q ss_pred             CCeeeEEEEcCC----------------------------------CCCCcEEEEEECC
Q 025083           91 TGFGHLAIATED----------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        91 ~~~~hia~~v~d----------------------------------DP~G~~iel~~~~  115 (258)
                      .|+.|++|.|++                                  ||+|+.|||++.+
T Consensus        75 ~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           75 VGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGG
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            467899999943                                  9999999999876

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.26  E-value=3.1e-11  Score=86.35  Aligned_cols=84  Identities=15%  Similarity=0.165  Sum_probs=55.2

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~   99 (258)
                      .+|+++|+.|.|+|++++++||+++|||++....+    .  .+++..++  .  .+.+......+....+.+ .|++|.
T Consensus         2 ~~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~~--~--~l~l~~~~~~~~~~~~~~-~~~~~~   70 (118)
T 2i7r_A            2 NAMNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGS--H--CLMLSQNHLVPLENFQSG-IIIHIE   70 (118)
T ss_dssp             --CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETT--E--EEEEESSCSSSCCCCCSC-EEEEEE
T ss_pred             CcceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----C--EEEEEeCC--e--EEEEEcCCCCCcccCCCe-EEEEEE
Confidence            35899999999999999999999999999875421    2  23344332  1  233322111111122334 489999


Q ss_pred             cCC--------------------------------CCCCcEEEEEEC
Q 025083          100 TED--------------------------------DPDGYIFELIQR  114 (258)
Q Consensus       100 v~d--------------------------------DP~G~~iel~~~  114 (258)
                      |+|                                ||+|+.||+++.
T Consensus        71 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           71 VEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             CSCHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             ECCHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEec
Confidence            988                                999999999874

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.26  E-value=3.3e-11  Score=89.72  Aligned_cols=89  Identities=15%  Similarity=0.228  Sum_probs=60.6

Q ss_pred             ccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcc-cCCCCeeeE
Q 025083           18 KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSY-DIGTGFGHL   96 (258)
Q Consensus        18 ~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~~~~hi   96 (258)
                      ...|+++.||.|.|+|++++++||+++|||++..+.    ..+  +++..++   ...+.|.......+. ..+.+..|+
T Consensus        20 ~~~m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~----~~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl   90 (144)
T 2kjz_A           20 QGHMTHPDFTILYVDNPPASTQFYKALLGVDPVESS----PTF--SLFVLAN---GMKLGLWSRHTVEPKASVTGGGGEL   90 (144)
T ss_dssp             ---CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE----TTE--EEEECTT---SCEEEEEETTSCSSCCCCSSSSCEE
T ss_pred             ccccCceeEEEEEeCCHHHHHHHHHHccCCEeccCC----CCe--EEEEcCC---CcEEEEEeCCCCCCccCCCCCceEE
Confidence            344669999999999999999999999999987653    123  3333322   234566443222111 223577899


Q ss_pred             EEEcCC----------------------------------CCCCcEEEEEECC
Q 025083           97 AIATED----------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        97 a~~v~d----------------------------------DP~G~~iel~~~~  115 (258)
                      +|.|+|                                  ||+|+.|||+++.
T Consensus        91 ~f~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           91 AFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEEC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecC
Confidence            999984                                  9999999998753

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.25  E-value=2.7e-11  Score=90.63  Aligned_cols=89  Identities=10%  Similarity=0.064  Sum_probs=56.1

Q ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc-ccCCCCeeeEE
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-YDIGTGFGHLA   97 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~hia   97 (258)
                      +|++++.||.|.|+|++++++||+++|||++....+    .  .+++..++   +..+.+.......+ .....+..|++
T Consensus         2 ~m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~--~~~~~~~~---g~~l~l~~~~~~~~~~~~~~~~~~l~   72 (148)
T 3rhe_A            2 VMLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----T--FAMFVMKT---GLRLGLWAQEEIEPKAHQTGGGMELS   72 (148)
T ss_dssp             -----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----S--EEEEECTT---SCEEEEEEGGGCSSCCC----CEEEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----C--EEEEEcCC---CcEEEEecCCcCCccccCCCCeEEEE
Confidence            367899999999999999999999999999876531    2  23344321   13455543322111 12234567899


Q ss_pred             EEcCC----------------------------------CCCCcEEEEEECCC
Q 025083           98 IATED----------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus        98 ~~v~d----------------------------------DP~G~~iel~~~~~  116 (258)
                      |.|++                                  ||+|+.|||++..+
T Consensus        73 f~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~~  125 (148)
T 3rhe_A           73 FQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLKR  125 (148)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC-
T ss_pred             EEcCCHHHHHHHHHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcCh
Confidence            99976                                  99999999998753

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.23  E-value=2.4e-10  Score=84.54  Aligned_cols=115  Identities=10%  Similarity=0.072  Sum_probs=72.5

Q ss_pred             CceeeeEEecChhhHHHHHHHhc-CCeEeeeecCC------ccceeEEEeeecCCCceeEEEEEEecCCcccccCCceee
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKAL-GMKLLRTIDSP------ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQ  192 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~h  192 (258)
                      ++....+.+.|.++|++||+++| |+++.......      ++.+..+.+..++    ..+.+. ...+. .  +.. ..
T Consensus         5 ~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~----~~~m~~-d~~~~-~--~~~-~s   75 (139)
T 1tsj_A            5 KITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG----QVFMAI-DANSG-T--ELP-IS   75 (139)
T ss_dssp             SEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT----EEEEEE-C----------C-CC
T ss_pred             ceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECC----EEEEEE-CCCCC-C--Cce-EE
Confidence            45545555569999999999999 99987532211      1223333344332    122221 11111 1  112 46


Q ss_pred             EEEEECC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          193 VAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       193 i~~~v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +++.|+|   +++++++|    . +|+++..+|...++ +.++++|+||+|+.|+|....
T Consensus        76 l~~~~~d~~evd~~~~~l----~-~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~  129 (139)
T 1tsj_A           76 LFVTVKDTIEMERLFNGL----K-DEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALPE  129 (139)
T ss_dssp             EEEECSSHHHHHHHHHHH----H-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEECC
T ss_pred             EEEECCCHHHHHHHHHHH----h-CCCEEeecccccCC-CceEEEEECCCCCEEEEeecc
Confidence            8999988   44444444    7 79999999888766 568999999999999998653

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.23  E-value=5.8e-11  Score=86.80  Aligned_cols=74  Identities=11%  Similarity=0.033  Sum_probs=47.2

Q ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEE
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~   98 (258)
                      .++++++||.|.|+|++++++||+++|||++....+    .+.  .+..++   ...+.+...... ......+..|++|
T Consensus         9 ~~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~~---~~~l~l~~~~~~-~~~~~~~~~~~~~   78 (132)
T 3sk2_A            9 GPTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYV--AFPSSG---DALFAIWSGGEE-PVAEIPRFSEIGI   78 (132)
T ss_dssp             CCCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEE--EEECST---TCEEEEESSSCC-CCTTSCCCEEEEE
T ss_pred             CCcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEE--EEEcCC---CcEEEEEeCCCC-CcCCCCCcceEEE
Confidence            346899999999999999999999999999875432    222  222211   124455432211 1122346678888


Q ss_pred             EcCC
Q 025083           99 ATED  102 (258)
Q Consensus        99 ~v~d  102 (258)
                      .|++
T Consensus        79 ~v~~   82 (132)
T 3sk2_A           79 MLPT   82 (132)
T ss_dssp             EESS
T ss_pred             EeCC
Confidence            8864

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.23  E-value=9.8e-11  Score=100.96  Aligned_cols=125  Identities=18%  Similarity=0.188  Sum_probs=91.7

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCcc--ceeEEEeeecCCCceeEEEEEEecCCc--c-----cccCC
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL--KCALAMLGYAEEDQTTVLELAYSYGVT--E-----YTKGN  188 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~--~-----~~~~~  188 (258)
                      ..+++||.|.|+|++++.+||+++|||+.......+.+  .....+++.+    ...+.|.....+.  +     ...|.
T Consensus         9 i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G----~i~~~L~~p~~p~s~~~a~fl~~hG~   84 (393)
T 3isq_A            9 FLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG----KIVFVLSSALNPWNKEMGDHLVKHGD   84 (393)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHHHHCS
T ss_pred             CceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC----CEEEEEecCCCCCchHHHHHHHhcCC
Confidence            35799999999999999999999999998875432222  1224455533    3556666532221  1     12467


Q ss_pred             ceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCC--eeEEEEECCCCCEEEEEcchh
Q 025083          189 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLN--TKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       189 g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~  250 (258)
                      |+.|++|.|+|++++++++    +++|++++.+|.......  .+...|++|.|..+.|+++..
T Consensus        85 Gv~~iAf~VdDvdaa~~ra----~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~  144 (393)
T 3isq_A           85 GVKDIAFEVEDCDYIVQKA----RERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMN  144 (393)
T ss_dssp             EEEEEEEEEECHHHHHHHH----HHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             cEEEEEEEeCCHHHHHHHH----HHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecccc
Confidence            9999999999999999999    899999998886443222  367779999999999998653

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.23  E-value=7.7e-11  Score=83.53  Aligned_cols=69  Identities=17%  Similarity=0.159  Sum_probs=47.9

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~  101 (258)
                      |+++||.|.|+|++++++||+++|||++....   +..  .+++..++   +..+.+......    ...+..|++|.|+
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~~--~~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GNA--FAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TTT--EEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CCc--EEEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            68999999999999999999999999987643   122  34554332   234666543211    1246789999995


Q ss_pred             C
Q 025083          102 D  102 (258)
Q Consensus       102 d  102 (258)
                      +
T Consensus        70 ~   70 (113)
T 1xqa_A           70 S   70 (113)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.22  E-value=1.5e-10  Score=84.73  Aligned_cols=32  Identities=25%  Similarity=0.492  Sum_probs=29.8

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      .++++||.|.|+|++++++||+++|||++...
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~   38 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARR   38 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeecc
Confidence            57899999999999999999999999999655

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.22  E-value=3.1e-10  Score=83.74  Aligned_cols=114  Identities=16%  Similarity=0.138  Sum_probs=74.0

Q ss_pred             eeEEec-ChhhHHHHHHHhcC-CeEeee--ec----CCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEE
Q 025083          124 VMLRVG-DLGRSIKFYEKALG-MKLLRT--ID----SPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAI  195 (258)
Q Consensus       124 v~l~v~-d~~~s~~FY~~~lG-~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~  195 (258)
                      ..|.+. |.+++++||+++|| .++...  ..    ..++....+.+..++    ..+.+...........+++ ..+++
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g----~~lm~~d~~~~~~~~~~~~-~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNG----QEFMCIDSYVNHNFTFTPA-MSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETT----EEEEEEECSSCCSCCCCTT-SCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECC----EEEEEEcCCCCCCCCCCCC-EEEEE
Confidence            456666 89999999999999 565433  21    122333445555432    3344432221111222333 45999


Q ss_pred             EECC---hHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          196 STDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       196 ~v~d---~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      .|+|   +++++++|    . +|.++..+|...++ +.++.+++||+|+.|.|...
T Consensus        88 ~~~d~~evd~~~~~l----~-~Gg~v~~p~~~~~w-g~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           88 TCETEEEIDTVFHKL----A-QDGAILMPLGSYPF-SKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EESSHHHHHHHHHHH----H-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             EcCCHHHHHHHHHHH----H-cCCeEecCcccccC-CcEEEEEECCCCCEEEEEeC
Confidence            9999   66666665    5 58899999887776 45899999999999999754

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.20  E-value=3.3e-10  Score=86.46  Aligned_cols=117  Identities=15%  Similarity=0.127  Sum_probs=77.0

Q ss_pred             eeeeEEecChhhHHHHHHHhcCCeEeeeecCC--------------ccceeEEEeeecCCCceeEEEEEEecCCcccccC
Q 025083          122 CQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP--------------ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKG  187 (258)
Q Consensus       122 ~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  187 (258)
                      ....|.+.|.+++++||+++||+++.......              .+....+.+..+    ...|.+....+. ++..+
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~----g~~lm~~D~~g~-~~~~~  101 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL----GVKVLCSDSFGR-ADKIN  101 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET----TEEEEEEECTTC-CCCCC
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC----CEEEEEECCCCC-CCCCC
Confidence            44567777999999999999999976543321              122334555543    234444432221 12233


Q ss_pred             CceeeEEEEEC--------ChHHHHHHHHHHHHHhC-CeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          188 NAYAQVAISTD--------DVYKSAEVVNLVTQELG-GKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       188 ~g~~hi~~~v~--------d~~~~~~~l~~~~~~~G-~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +++ .+++.++        |+++++++|    .+.| +++..+|...++ +.++++|+||+|+.|+|....
T Consensus       102 ~~~-sl~l~~~~~d~~~~~dvd~~~~~l----~~~G~a~v~~p~~~~~w-G~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          102 NGI-SLLIDYDVNNKEDADKVEAFYEQI----KDHSSIEIELPFADQFW-GGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             SSE-EEEEEEETTCHHHHHHHHHHHHHH----TTCTTCEEEEEEEECTT-SSEEEEEECTTSCEEEEEEEC
T ss_pred             CcE-EEEEEEccCccCcHHHHHHHHHHH----HhCCCceEecCccccCC-CcEEEEEECCCCCEEEEEeCC
Confidence            343 3777774        555566555    8888 699998887766 458899999999999997653

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.20  E-value=1.2e-10  Score=101.61  Aligned_cols=122  Identities=15%  Similarity=0.086  Sum_probs=88.5

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCc--cceeEEEeeecCCCceeEEEEEEecCC--------------c
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYGV--------------T  182 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~--------------~  182 (258)
                      .++.||.|.|+|++++.+||++.|||++..+.....  ....+++++.+    ...+.|.....+              .
T Consensus        30 ~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G----~~~l~L~~~~~~~~~~~~~p~~~~~~~  105 (418)
T 1sp8_A           30 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATAALPSFSAA  105 (418)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC----CEEEEEecCCCCcccccccccccccch
Confidence            578999999999999999999999999887643221  13455556543    355666654222              0


Q ss_pred             c-----cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          183 E-----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       183 ~-----~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +     ...+.|+.|++|.|+|++++++++    +++|+++..+|....+ ..+...+++|+|..++|+++.
T Consensus       106 ~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l----~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A          106 AARRFAADHGLAVRAVALRVADAEDAFRAS----VAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHH----HTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECC
T ss_pred             hHHHHHhhcCCeeEEEEEEeCCHHHHHHHH----HHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccC
Confidence            0     123568999999999999999999    8999999887743212 235666788888888888765

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.19  E-value=1.9e-10  Score=85.78  Aligned_cols=72  Identities=25%  Similarity=0.285  Sum_probs=46.5

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCC---CcccCCCCeeeE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV---TSYDIGTGFGHL   96 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~hi   96 (258)
                      ++.+++||.|.|+|++++++||+++|||++....   + .+  .++..++  .  .+.+......   .......|..|+
T Consensus        24 ~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~-~~--~~l~~g~--~--~l~l~~~~~~~~~~~~~~~~g~~~~   93 (147)
T 3zw5_A           24 LIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---E-DR--KALCFGD--Q--KFNLHEVGKEFEPKAAHPVPGSLDI   93 (147)
T ss_dssp             SCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TE--EEEEETT--E--EEEEEETTSCCSSCCSSCCTTCCEE
T ss_pred             ecccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---C-Cc--eEEEECC--c--EEEEEEcCCCcCcccCCCCCCCceE
Confidence            4679999999999999999999999999988542   1 12  2333332  2  3444332111   111223466788


Q ss_pred             EEEcC
Q 025083           97 AIATE  101 (258)
Q Consensus        97 a~~v~  101 (258)
                      +|.+.
T Consensus        94 ~~~~~   98 (147)
T 3zw5_A           94 CLITE   98 (147)
T ss_dssp             EEECS
T ss_pred             EEEec
Confidence            88876

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.13  E-value=1.3e-10  Score=86.48  Aligned_cols=85  Identities=14%  Similarity=0.214  Sum_probs=57.7

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      +.++. +.|.|+|++++++||+++|||++..+...++.....++++  .      +++.......  ....+..|++|.|
T Consensus         5 i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~--~------~~l~~~~~~~--~~~~~~~hl~f~V   73 (144)
T 3r6a_A            5 ILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS--T------ILLIAGSEEA--LKPFRNTQATFLV   73 (144)
T ss_dssp             EEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET--T------EEEEESCHHH--HGGGGGCCEEEEE
T ss_pred             EEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec--c------EEEecCCccc--CCCCcceEEEEEe
Confidence            45666 8999999999999999999999876644333334444432  1      3343321111  1112447899999


Q ss_pred             CC-------------------------------CCCCcEEEEEECCC
Q 025083          101 ED-------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus       101 ~d-------------------------------DP~G~~iel~~~~~  116 (258)
                      +|                               ||+|+.|||++...
T Consensus        74 ~d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~~  120 (144)
T 3r6a_A           74 DSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHSK  120 (144)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEECC
T ss_pred             CCHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcCC
Confidence            88                               99999999998763

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.13  E-value=2.7e-10  Score=83.81  Aligned_cols=88  Identities=16%  Similarity=0.151  Sum_probs=59.7

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeec------CCCcccCCCCe
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY------GVTSYDIGTGF   93 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~------~~~~~~~~~~~   93 (258)
                      |++++.|+.|.|+|++++++||++ |||++..+.+  ...+  +.+..++   ...+.+....      .......+.+.
T Consensus         1 M~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~   72 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPH--TEAVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHR   72 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSE--EEEECTT---SCEEEEEEHHHHHHHCTTCCCCBSSCS
T ss_pred             CcceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCce--EEEEcCC---CeEEEEecCccchhhCcccCCCCCCCe
Confidence            568999999999999999999998 9999875432  2223  2222211   2345554321      11111233577


Q ss_pred             eeEEEEcC---C--------------------------------CCCCcEEEEEECC
Q 025083           94 GHLAIATE---D--------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        94 ~hia~~v~---d--------------------------------DP~G~~iel~~~~  115 (258)
                      .|++|.|+   |                                ||+|+.|||++..
T Consensus        73 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           73 FAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCC
Confidence            89999999   5                                9999999999875

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.12  E-value=6.4e-10  Score=81.50  Aligned_cols=86  Identities=15%  Similarity=0.226  Sum_probs=57.1

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      .++--+..|.|+|++++++||+++|||++..+.+    .  .+++..++    ..+.+...........+.+..|++|.|
T Consensus         5 ~~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~--~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~~l~~~v   74 (134)
T 3fcd_A            5 DIHQITPFLHIPDMQEALTLFCDTLGFELKYRHS----N--YAYLELSG----CGLRLLEEPARKIIPDGIARVAICIDV   74 (134)
T ss_dssp             -CCEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----T--EEEEEETT----EEEEEEECCCC---------EEEEEEC
T ss_pred             hhhcceeEEEECCHHHHHHHHHhccCcEEEEeCC----C--eEEEEECC----EEEEEEeCCCCCcCCCCCceEEEEEEe
Confidence            4556778999999999999999999999886532    1  34444432    345565443221111122336899999


Q ss_pred             CC------------------------------------CCCCcEEEEEECCC
Q 025083          101 ED------------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus       101 ~d------------------------------------DP~G~~iel~~~~~  116 (258)
                      +|                                    |||||.|||.+...
T Consensus        75 ~dv~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           75 SDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             SCHHHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             CCHHHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEccc
Confidence            88                                    99999999998763

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.12  E-value=8.1e-10  Score=82.25  Aligned_cols=73  Identities=16%  Similarity=0.249  Sum_probs=50.2

Q ss_pred             cccceeeEEEEEeCCHHHHHHHH---HHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecC---CCccc-CCC
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYY---TECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYG---VTSYD-IGT   91 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~-~~~   91 (258)
                      .++++++||.|.|+|++++++||   +++|||++.....  .  . ..|+. ++    ..+.|.....   ..+.. ...
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~--~-~~~~~-g~----~~l~l~~~~~~~~~~~~~~~~~   85 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--R--G-KSYKH-GK----TYLVFVQTEDRFQTPTFHRKRT   85 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--T--E-EEEEE-TT----EEEEEEECCGGGSCSCCCTTSS
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--C--C-ceEec-CC----eEEEEEEcCCCcccccccccCC
Confidence            34689999999999999999999   9999999886542  1  1 23444 22    3566654322   11111 235


Q ss_pred             CeeeEEEEcC
Q 025083           92 GFGHLAIATE  101 (258)
Q Consensus        92 ~~~hia~~v~  101 (258)
                      ++.|++|.|+
T Consensus        86 g~~hi~f~v~   95 (146)
T 3ct8_A           86 GLNHLAFHAA   95 (146)
T ss_dssp             SCCEEEEECS
T ss_pred             CceEEEEECC
Confidence            7789999998

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.11  E-value=2.4e-10  Score=85.43  Aligned_cols=86  Identities=22%  Similarity=0.346  Sum_probs=58.7

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCC-----CcccCCCCee
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV-----TSYDIGTGFG   94 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-----~~~~~~~~~~   94 (258)
                      |+++++|+.|.|+|++++++||+++|||++....    +.  .+++..++    ..+.|......     .+...+.+..
T Consensus         2 M~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~--~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~~   71 (150)
T 3bqx_A            2 SLQQVAVITLGIGDLEASARFYGEGFGWAPVFRN----PE--IIFYQMNG----FVLATWLVQNLQEDVGVAVTSRPGSM   71 (150)
T ss_dssp             -CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SS--EEEEECSS----SEEEEEEHHHHHHHHSSCCCSSCCSC
T ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CC--EEEEEcCC----EEEEEEeccccccccCCCCCCCCCeE
Confidence            4579999999999999999999999999987652    22  34444322    34566543210     0111134668


Q ss_pred             eEEEEc---CC--------------------------------CCCCcEEEEEECC
Q 025083           95 HLAIAT---ED--------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        95 hia~~v---~d--------------------------------DP~G~~iel~~~~  115 (258)
                      |++|.|   +|                                ||+|+.|||++.+
T Consensus        72 ~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           72 ALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             EEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECT
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCC
Confidence            999999   44                                8899988888764

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.08  E-value=1.4e-09  Score=81.08  Aligned_cols=31  Identities=19%  Similarity=0.355  Sum_probs=25.6

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      ..|+.||+|.|+|+++|++||+++ |+.....
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~l-g~~~~~~   37 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGTL-GFEFNPK   37 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHHT-TCEECGG
T ss_pred             CccEEEEEEEeCCHHHHHHHHHHh-CCCccee
Confidence            578999999999999999999884 5555433

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.06  E-value=1e-09  Score=79.86  Aligned_cols=87  Identities=14%  Similarity=0.092  Sum_probs=53.4

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEec-cCCCCceeEEEEEeecCCCcccCCCCeeeEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLG-FGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~   98 (258)
                      |..+++||.|.|+|++++++||++ |||++..... +.+.+  +++. .++    ..+.+.... .. .....+..|++|
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~~--~~~~~~~~----~~l~l~~~~-~~-~~~~~~~~~l~f   72 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGSE--VHRAVHNG----VEFSLYSIQ-NP-QRSQIPSLQLGF   72 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CC--EEEEEETT----EEEEEEECC-CC-SSCCCCSEEEEE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCCE--EEEEeCCC----eEEEEEECC-CC-cCCCCCceEEEE
Confidence            556899999999999999999999 9999875421 11223  2222 121    234443221 11 112223467888


Q ss_pred             EcCC--------------------------------CCCCcEEEEEECCC
Q 025083           99 ATED--------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus        99 ~v~d--------------------------------DP~G~~iel~~~~~  116 (258)
                      .|+|                                |||||.|+|.+.++
T Consensus        73 ~v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           73 QITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             EESCHHHHHHHHTTSTTCEEEEEEEECC-CEEEEEECTTCCEEEEEC---
T ss_pred             EeCCHHHHHHHHHHCCCceeccCceeCCCccEEEEECCCCCEEEEEEecc
Confidence            8887                                99999999987653

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.06  E-value=1.6e-09  Score=80.86  Aligned_cols=32  Identities=25%  Similarity=0.439  Sum_probs=29.7

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEee
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLR   51 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~   51 (258)
                      |..++.|+.|.|+|++++++||+++|||++..
T Consensus        22 M~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~   53 (148)
T 2r6u_A           22 MTGRIVHFEIPFDDGDRARAFYRDAFGWAIAE   53 (148)
T ss_dssp             TCCCEEEEEEEESSHHHHHHHHHHHHCCEEEE
T ss_pred             cCCceEEEEEEeCCHHHHHHHHHHccCcEEEE
Confidence            45689999999999999999999999999876

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.04  E-value=3.2e-09  Score=84.25  Aligned_cols=113  Identities=18%  Similarity=0.190  Sum_probs=74.0

Q ss_pred             ceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeE---EEEE
Q 025083          121 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQV---AIST  197 (258)
Q Consensus       121 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi---~~~v  197 (258)
                      .....|+|+|.+++++||+++|||++.....      ..+.++...  ....|.+.+.+.... ....|.-|+   ++.|
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~--~~~~L~lEEsp~~~~-~~~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQT--GLEKLVLEEAPSMRT-RKVEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTT--CCEEEEEEECCTTTC-BCCCSSCSEEEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCC--CcceEEEEeCCCccc-ccccccceeeeEEEEc
Confidence            4567999999999999999999999887653      345566433  234455554433221 223455555   6999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      +|-.++..-|     +++.++..   ...+..+..+|+.||+||.|||+...+
T Consensus        82 p~~~el~~lL-----~~~~~~~~---~~~gdhgyA~yl~dPEGn~ieiyae~d  126 (244)
T 3e0r_A           82 ENPLEIEGIL-----SKTDSIHR---LYKGQNGYAFEIFSPEDDLILIHAEDD  126 (244)
T ss_dssp             SSHHHHHHHH-----TTCSCCSE---EEECSSSEEEEEECTTCCEEEEECCSC
T ss_pred             CCHHHHHHHH-----hccccccc---ccccCCcEEEEEECCCCCeEEEEEcCC
Confidence            9965555444     34555422   011223467999999999999997653

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.04  E-value=1.4e-09  Score=80.32  Aligned_cols=31  Identities=13%  Similarity=0.249  Sum_probs=28.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      .++.|+.|.|+|++++++||+++|||++..+
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~   37 (141)
T 2rbb_A            7 ADLSYVNIFTRDIVAMSAFYQQVFGFQEIES   37 (141)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHCCEECGG
T ss_pred             CcccEEEEEECCHHHHHHHHHHhcCCeeecc
Confidence            4899999999999999999999999998754

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.04  E-value=5.7e-10  Score=79.68  Aligned_cols=81  Identities=20%  Similarity=0.297  Sum_probs=55.6

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      +.++ |+.|.|+|++++++||+++|||++....    + +. .++..+. .....+.+.....     ...+..|++|.|
T Consensus         6 i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~-~~-~~~~~~~-~~~~~l~l~~~~~-----~~~~~~~~~~~v   72 (119)
T 2pjs_A            6 VRRV-VANIATPEPARAQAFYGDILGMPVAMDH----G-WI-VTHASPL-EAHAQVSFAREGG-----SGTDVPDLSIEV   72 (119)
T ss_dssp             EEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----S-SE-EEEEEEE-EEEEEEEEESSSB-----TTBCCCSEEEEE
T ss_pred             eeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----C-EE-EEEecCC-CCcEEEEEEcCCC-----CCCceeEEEEEE
Confidence            5678 9999999999999999999999987641    2 22 2333221 1133455543211     123457899999


Q ss_pred             CC--------------------------------CCCCcEEEEEEC
Q 025083          101 ED--------------------------------DPDGYIFELIQR  114 (258)
Q Consensus       101 ~d--------------------------------DP~G~~iel~~~  114 (258)
                      +|                                ||+|+.||+++.
T Consensus        73 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           73 DNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             SCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence            88                                999999999875

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.04  E-value=2.4e-09  Score=78.46  Aligned_cols=86  Identities=19%  Similarity=0.232  Sum_probs=57.9

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc--ccCCCCeeeEEEEcCC
Q 025083           25 LHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS--YDIGTGFGHLAIATED  102 (258)
Q Consensus        25 ~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~hia~~v~d  102 (258)
                      -.+.|.|+|++++++||+++|||++..+...+ +....+.+..++    ..+.+........  ...+.++.|++|.|+|
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGG----GIVMVRRTGEPYTVSCAGGHTCKQVIVWVSD   78 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSS----SEEEEEETTCCSSCEECCCCCCCEEEEEESC
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCC----eEEEEEecCCCcCccCCCCCcEEEEEEEeCC
Confidence            47899999999999999999999998765433 333344444332    2344543222111  1112233489999998


Q ss_pred             --------------------------------CCCCcEEEEEECC
Q 025083          103 --------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus       103 --------------------------------DP~G~~iel~~~~  115 (258)
                                                      ||+||.|||++..
T Consensus        79 v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           79 VDEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC
T ss_pred             HHHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEc
Confidence                                            9999999999875

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.02  E-value=1.2e-09  Score=93.41  Aligned_cols=117  Identities=14%  Similarity=0.101  Sum_probs=83.3

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc----cccCCceeeE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE----YTKGNAYAQV  193 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~g~~hi  193 (258)
                      ..+++||.+.|+|++++.+|| ++|||++..+....    ...++..+    ...+.+...+....    ...+.++.|+
T Consensus        10 i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g----~~~l~l~~~~~~~~~~~~~~~g~gv~~i   80 (357)
T 1cjx_A           10 LMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQG----EINLILNNEPNSIASYFAAEHGPSVCGM   80 (357)
T ss_dssp             EEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEET----TEEEEEECCSSSHHHHHHHHHSSEEEEE
T ss_pred             cceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecC----CEEEEEECCCCchhhhhhhhcCCeEEEE
Confidence            467999999999999999999 79999988764321    23334432    34455543222110    1345789999


Q ss_pred             EEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          194 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       194 ~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +|.|+|++++++++    +++|+++..+|..  .+......+++|+|..++|+++.
T Consensus        81 af~V~D~~~~~~~l----~~~G~~~~~~~~~--~g~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           81 AFRVKDSQKAYNRA----LELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             EEEESCHHHHHHHH----HHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCC
T ss_pred             EEEeCCHHHHHHHH----HHcCCEEeecCCC--CCcEEEEeeeCCCCeEEEEECCC
Confidence            99999999888888    8999998776532  22234667899999999998765

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=98.91  E-value=3.6e-09  Score=77.87  Aligned_cols=32  Identities=25%  Similarity=0.613  Sum_probs=29.8

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      +|+++|+.|.|+|++++++||+++|||++...
T Consensus         6 ~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~   37 (141)
T 2qnt_A            6 GMRFVNPIPFVRDINRSKSFYRDRLGLKILED   37 (141)
T ss_dssp             SCCCCCCCCEESCHHHHHHHHHHTTCCCEEEE
T ss_pred             ccccceEEEEECCHHHHHHHHHHhcCCEEEEE
Confidence            58899999999999999999999999998764

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=98.79  E-value=6.1e-08  Score=69.87  Aligned_cols=30  Identities=17%  Similarity=0.332  Sum_probs=26.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      +...|+.|.|+|++++++||++ |||++..+
T Consensus         2 ~~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~   31 (126)
T 1ecs_A            2 TDQATPNLPSRDFDSTAAFYER-LGFGIVFR   31 (126)
T ss_dssp             CCEEEEEEEESCHHHHHHHHHT-TTCEEEEE
T ss_pred             CccEEEEEEeCCHHHHHHHHHH-CCCEEEec
Confidence            3457899999999999999998 99998764

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=98.77  E-value=7.3e-08  Score=69.30  Aligned_cols=31  Identities=13%  Similarity=0.249  Sum_probs=28.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      .+..|+.|.|+|++++++||+++|||++...
T Consensus         4 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~   34 (124)
T 1xrk_A            4 LTSAVPVLTARDVAEAVEFWTDRLGFSRVFV   34 (124)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             ccceeEEEEcCCHHHHHHHHHHccCceEEec
Confidence            4668999999999999999999999998765

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=98.72  E-value=3.5e-08  Score=73.33  Aligned_cols=32  Identities=28%  Similarity=0.308  Sum_probs=29.5

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEee
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLR   51 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~   51 (258)
                      +++++.|+.|.|+|++++++||+++|||++..
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~   49 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDI   49 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEe
Confidence            46799999999999999999999999999863

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=98.68  E-value=2.9e-07  Score=67.96  Aligned_cols=28  Identities=11%  Similarity=0.292  Sum_probs=25.3

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           25 LHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        25 ~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      -.+.|.|+|+++|++||+++|||++...
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~   34 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYE   34 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEee
Confidence            5689999999999999999999998753

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=98.62  E-value=1.5e-07  Score=67.48  Aligned_cols=30  Identities=13%  Similarity=0.151  Sum_probs=26.7

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           23 RFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        23 ~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      +..|+.|.|+|++++++||+++|||++...
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~   34 (122)
T 1qto_A            5 LGAVPVLTAVDVPANVSFWVDTLGFEKDFG   34 (122)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             cceeEEEEcCCHHHHHHHHHhccCcEEeeC
Confidence            345899999999999999999999998764

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.51  E-value=4.1e-06  Score=62.25  Aligned_cols=31  Identities=10%  Similarity=0.107  Sum_probs=26.3

Q ss_pred             cceeeEEEEEeC-CHHHHHHHHHHhcCCEEeee
Q 025083           21 KRRFLHAVYRVG-DLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        21 ~~~~~hv~l~v~-dl~~s~~FY~~~lG~~~~~~   52 (258)
                      .|++ +..|.|. |+++|++||+++||+++...
T Consensus         2 ~m~~-~p~L~v~~d~~~A~~FY~~vfG~~~~~~   33 (149)
T 1u6l_A            2 SLQI-VPYLIFNGNCREAFSCYHQHLGGTLEAM   33 (149)
T ss_dssp             CCEE-EEEEEESSCHHHHHHHHHHHHCSEEEEE
T ss_pred             cceE-EEEEEECCCHHHHHHHHHHHhCCEEEEE
Confidence            3564 4889999 99999999999999998754

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=98.40  E-value=3e-06  Score=70.00  Aligned_cols=38  Identities=11%  Similarity=0.030  Sum_probs=32.4

Q ss_pred             cCcccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           15 EWPKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        15 ~~~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      +|..+......++.+.|+|+++|++||+++|||++...
T Consensus       175 ~~~~~~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~  212 (301)
T 2zw5_A          175 RAEEPLTTLAVITELPVRDVAATLRLVEAALGARTAFA  212 (301)
T ss_dssp             SSCCSCEEEEEEEEEEESCHHHHHHHHHHHSCCEEEEE
T ss_pred             HhhhhcccceeEEEEEeCCHHHHHHHHHHhcCCeEeee
Confidence            57666666667899999999999999999999998754

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.28  E-value=2.1e-05  Score=59.12  Aligned_cols=107  Identities=13%  Similarity=0.099  Sum_probs=65.6

Q ss_pred             eeEEec-ChhhHHHHHHHhc-CCeEeee--ecC-----CccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEE
Q 025083          124 VMLRVG-DLGRSIKFYEKAL-GMKLLRT--IDS-----PELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVA  194 (258)
Q Consensus       124 v~l~v~-d~~~s~~FY~~~l-G~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  194 (258)
                      ..|... |.+++.+||+++| |.++...  ...     +++..-.+.+..++    ..+.+... .+ ......++ .++
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g----~~~m~~d~-~p-~~~~~~~~-sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG----IPCLGLNG-GP-AFRHSEAF-SFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT----EEEEEEEC-CT-TCCCCTTE-EEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECC----EEEEEECC-CC-CcCCCCce-EEE
Confidence            345666 9999999999999 9987743  211     12334445555432    23333322 12 12222344 588


Q ss_pred             EEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          195 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       195 ~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +.++|. +..+++.++|.+.|.++.           ++..++||.|+.|.|....
T Consensus        82 v~~~d~-~e~d~~~~~L~~~Gg~v~-----------~~G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           82 VATDDQ-AETDRLWNAIVDNGGEES-----------ACGWCRDKWGISWQITPRV  124 (163)
T ss_dssp             EEESSH-HHHHHHHHHHHHTTCEEC-----------STTEEECTTSCEEEEEEHH
T ss_pred             EEeCCH-HHHHHHHHHHHhCCCEEE-----------EEEEEECCCCCEEEEEeEc
Confidence            999983 334444455576799876           2337999999999998653

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=98.23  E-value=1.3e-05  Score=60.67  Aligned_cols=31  Identities=13%  Similarity=0.225  Sum_probs=26.2

Q ss_pred             ceeeEEEEEeCC--HHHHHHHHHHhcCCEEeee
Q 025083           22 RRFLHAVYRVGD--LDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        22 ~~~~hv~l~v~d--l~~s~~FY~~~lG~~~~~~   52 (258)
                      +.--++.|.|+|  +++|++||+++|||++...
T Consensus        23 ~~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~   55 (166)
T 1xy7_A           23 FTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGH   55 (166)
T ss_dssp             EEEEEEEEEECTTCHHHHHHHHHHHHCCEEC--
T ss_pred             CceEEEEEEECCcCHHHHHHHHHHHhCCEEEEE
Confidence            445788999999  9999999999999998753

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.17  E-value=6.3e-05  Score=54.73  Aligned_cols=30  Identities=17%  Similarity=0.381  Sum_probs=25.2

Q ss_pred             cceeeEEEEEeC--CHHHHHHHHHHhc-CCEEee
Q 025083           21 KRRFLHAVYRVG--DLDRTIKYYTECF-GMELLR   51 (258)
Q Consensus        21 ~~~~~hv~l~v~--dl~~s~~FY~~~l-G~~~~~   51 (258)
                      ++++. ..|.+.  |+++|++||+++| |+++..
T Consensus         4 m~~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~   36 (136)
T 1u7i_A            4 SARVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQ   36 (136)
T ss_dssp             CCEEE-EEEEEESSCHHHHHHHHHHHCSSEEEEE
T ss_pred             cccce-EEEEECCCCHHHHHHHHHHHcCCCEeeE
Confidence            34555 678887  9999999999999 999874

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=97.69  E-value=0.0006  Score=49.82  Aligned_cols=31  Identities=16%  Similarity=0.290  Sum_probs=25.1

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhc-CCEEee
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECF-GMELLR   51 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~l-G~~~~~   51 (258)
                      ++++...-+.+.|+++|++||+++| |+++..
T Consensus         3 ~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~   34 (139)
T 1tsj_A            3 IPKITTFLMFNNQAEEAVKLYTSLFEDSEIIT   34 (139)
T ss_dssp             CCSEEEEEECSSCHHHHHHHHHHHSSSCEEEE
T ss_pred             CCceeEEEEECCCHHHHHHHHHHHcCCCEEEE
Confidence            4566666566669999999999999 999874

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=97.56  E-value=0.0034  Score=51.16  Aligned_cols=123  Identities=13%  Similarity=0.093  Sum_probs=76.4

Q ss_pred             CcccccceeeEEEEEeCCHHHHHHHHHHhcC-----CEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCC------
Q 025083           16 WPKKDKRRFLHAVYRVGDLDRTIKYYTECFG-----MELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGV------   84 (258)
Q Consensus        16 ~~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------   84 (258)
                      -...|+.+++|+.+.|++++        .||     +++.....=+..+.....+.+++    ..|||....+.      
T Consensus        17 ~~~~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg----~YLElIai~~~~~~~~~   84 (274)
T 3p8a_A           17 RGSHMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINE----NYIELLDVENNEKLKKM   84 (274)
T ss_dssp             ----CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSS----SEEEEEEESCHHHHHHH
T ss_pred             CCcCccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCC----EEEEEEeecCccccccc
Confidence            34557899999999999985        456     87665321121122233333322    25787654321      


Q ss_pred             ----Cc----------ccCCCCeeeEEEEcCC------------------------CCCCcEEEEE----ECCC------
Q 025083           85 ----TS----------YDIGTGFGHLAIATED------------------------DPDGYIFELI----QRGP------  116 (258)
Q Consensus        85 ----~~----------~~~~~~~~hia~~v~d------------------------DP~G~~iel~----~~~~------  116 (258)
                          .+          ...+.|+.++|++++|                        +|||..+++-    ....      
T Consensus        85 ~~~~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~~~~~~~  164 (274)
T 3p8a_A           85 AKTIEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKP  164 (274)
T ss_dssp             TTSTGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSSCCSSCC
T ss_pred             ccccCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCCccCCCc
Confidence                01          1235699999999988                        7888543321    1110      


Q ss_pred             ----------------------CCCCceeeeEEecChhhHHHHHHHhcCCeEeeee
Q 025083          117 ----------------------TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTI  150 (258)
Q Consensus       117 ----------------------~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~  150 (258)
                                            ...+|.+|.+.++|++++.+.|.++||.......
T Consensus       165 PFfiqw~~~~~~r~~~~~~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~  220 (274)
T 3p8a_A          165 PFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEN  220 (274)
T ss_dssp             CEEEEESSCTTHHHHHHTTTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEEC
T ss_pred             cEEEecCCCccccccccccCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCccccC
Confidence                                  1247889999999999999999999999886543

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=97.44  E-value=0.0031  Score=45.94  Aligned_cols=26  Identities=15%  Similarity=0.413  Sum_probs=21.2

Q ss_pred             EEEEEeC-CHHHHHHHHHHhcC-CEEee
Q 025083           26 HAVYRVG-DLDRTIKYYTECFG-MELLR   51 (258)
Q Consensus        26 hv~l~v~-dl~~s~~FY~~~lG-~~~~~   51 (258)
                      ..-|.+. |.+++++||+++|| .++..
T Consensus        12 ~P~L~f~g~a~eA~~FY~~vFg~~~i~~   39 (138)
T 3oms_A           12 TTFLMFEGKAEEAMNFYTSLFDQSEIVS   39 (138)
T ss_dssp             CEEEEESSCHHHHHHHHHTTSTTCCEEE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCceEEE
Confidence            4557777 89999999999999 67653

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.41  E-value=0.00021  Score=67.08  Aligned_cols=119  Identities=17%  Similarity=0.188  Sum_probs=71.8

Q ss_pred             CceeeeEEec---ChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEec-CCc----------cc-
Q 025083          120 PLCQVMLRVG---DLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY-GVT----------EY-  184 (258)
Q Consensus       120 ~i~hv~l~v~---d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-~~~----------~~-  184 (258)
                      +...+.+...   -++++++||++.|++........   ....+++...+  ....+.+.... +..          .. 
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (941)
T 3opy_B            9 GTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSNQ---KLFWLQLEEDQ--NNVSIQLILDPEHAASVSQIDQNIRNLT   83 (941)
T ss_dssp             EEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCSC---CC---EECCTT--SCCEEEEECSSCSCHHHHHHHHHHHCCC
T ss_pred             ceeEEEEEeCCHHHHHHHHHHHHhhccceeccccCC---cceeEEEecCC--CeEEEEEEeccccchhHHHHHHHHhhhh
Confidence            3445555543   58999999999999976553221   11234443222  24555544331 110          00 


Q ss_pred             -------ccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          185 -------TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       185 -------~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                             +++ -..|+.|.+.|++++.+.|    .+.+.++-..|.+..   ...+|+.||+||.|+|.+....
T Consensus        84 ~~~~~~dW~~-~~~~l~f~~~dL~~~~~~L----~~~~~~~Q~~ps~~~---~~e~yt~DPlGNvIgfs~~~~~  149 (941)
T 3opy_B           84 RSLYRKDWRS-IQSNIAFKSSSLSKLVKLL----KDGGHPVQQSPNEIS---PFEVYTVDPLGSLIGFSGFKNP  149 (941)
T ss_dssp             -----------CCCEEEEEESCHHHHHHHH----HTTTCCCBCSSSSCS---CEEECCSSCCEEEECC-CCSSS
T ss_pred             cccccccccc-cCceEEEEeCCHHHHHHHH----HhcCCccccCCCcCC---CceEEeECCCCCEEEEeccCCc
Confidence                   111 2239999999999999888    788887765554332   2678999999999999877653

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=96.89  E-value=0.038  Score=41.70  Aligned_cols=32  Identities=19%  Similarity=0.354  Sum_probs=25.5

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      +|.--..-|.+.|.++|++||+++||.+++..
T Consensus        23 mm~~i~PyL~f~~a~eAi~FY~~vFG~~~~~~   54 (172)
T 3l20_A           23 YMTALFPYIAFENSKEALAYYEEVFGATDVKR   54 (172)
T ss_dssp             CCCEEEEEEEESCHHHHHHHHHHHSCCEEEEE
T ss_pred             ecCcEEEEEEECCHHHHHHHHHHHcCCEEEEE
Confidence            34334567888899999999999999997654

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=96.03  E-value=0.12  Score=38.46  Aligned_cols=109  Identities=14%  Similarity=0.136  Sum_probs=61.2

Q ss_pred             EEEEEeC-CHHHHHHHHHHhc-CCEEeeeecc-------CCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeE
Q 025083           26 HAVYRVG-DLDRTIKYYTECF-GMELLRKRDV-------PEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (258)
Q Consensus        26 hv~l~v~-dl~~s~~FY~~~l-G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi   96 (258)
                      ..-|.+. |.+++++||+++| |.++......       +++....+-+..++  .  .+-+...  .+......++ .+
T Consensus         8 ~PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g--~--~~m~~d~--~p~~~~~~~~-sl   80 (163)
T 1u69_A            8 TICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG--I--PCLGLNG--GPAFRHSEAF-SF   80 (163)
T ss_dssp             EEEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT--E--EEEEEEC--CTTCCCCTTE-EE
T ss_pred             eEEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECC--E--EEEEECC--CCCcCCCCce-EE
Confidence            3457777 9999999999999 9887642111       12333334344332  1  1212211  1112222333 57


Q ss_pred             EEEcCC-------------------------CCCCcEEEEEECCCCCCCceeeeEEecChhhHHHHHHHhcCCeEe
Q 025083           97 AIATED-------------------------DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL  147 (258)
Q Consensus        97 a~~v~d-------------------------DP~G~~iel~~~~~~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~  147 (258)
                      .+.|+|                         ||-|+.+.|....      -.-.+.-.|.+++.+-+...|+|+-.
T Consensus        81 ~v~~~d~~e~d~~~~~L~~~Gg~v~~~G~v~D~fGv~W~i~~~~------~~~~~~d~d~~~~~r~~~am~~m~k~  150 (163)
T 1u69_A           81 QVATDDQAETDRLWNAIVDNGGEESACGWCRDKWGISWQITPRV------LSEAIASPDRAAARRAFEAMMTMGRI  150 (163)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCEECSTTEEECTTSCEEEEEEHH------HHHHHTCSSHHHHHHHHHHHTTCSSC
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCEEEEEEEEECCCCCEEEEEeEc------hHHhccCCCHHHHHHHHHHHHCCcce
Confidence            777776                         6666666555321      00112345889999999999998643

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=94.69  E-value=0.3  Score=39.60  Aligned_cols=111  Identities=12%  Similarity=0.109  Sum_probs=65.2

Q ss_pred             EEECC-CCCCCceeeeEEecChhhHHHHHHHhcC-----CeEeeeecCCc-ccee-EEEeeecCCCceeEEEEEEecCCc
Q 025083          111 LIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALG-----MKLLRTIDSPE-LKCA-LAMLGYAEEDQTTVLELAYSYGVT  182 (258)
Q Consensus       111 l~~~~-~~~~~i~hv~l~v~d~~~s~~FY~~~lG-----~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~l~~~~~~~  182 (258)
                      |+.+. .|..+++|+.+.|.+++        .||     |++.....-+. +... ++.+  +    ...|||....+..
T Consensus        14 ~~~~~~~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~f--d----g~YLElIai~~~~   79 (274)
T 3p8a_A           14 LVPRGSHMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYI--N----ENYIELLDVENNE   79 (274)
T ss_dssp             -------CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEEC--S----SSEEEEEEESCHH
T ss_pred             cccCCcCccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEee--C----CEEEEEEeecCcc
Confidence            44433 46789999999999884        467     88765432221 2222 3333  2    4567776543321


Q ss_pred             ----------c----------cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecC---CccCCCCC---eeEEEEE
Q 025083          183 ----------E----------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ---PGPIPGLN---TKITSFV  236 (258)
Q Consensus       183 ----------~----------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~---p~~~~~~~---~~~~~~~  236 (258)
                                +          ...+.|+.++++.++|+++..+++    .++|+.+..+   -+..+.|.   .+.++..
T Consensus        80 ~~~~~~~~~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l----~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~  155 (274)
T 3p8a_A           80 KLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKL----QSEQVEVVGPIQMERDTHKDGKVKWQLLYIM  155 (274)
T ss_dssp             HHHHHTTSTGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHH----HTTTCEEEEEEEEEECCCC--CEEEEEEEEE
T ss_pred             cccccccccCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHH----HHcCCCcCCCccccccCCCCCEEEEEEEecc
Confidence                      1          123569999999999999999888    8889865321   12223322   2456677


Q ss_pred             CCC
Q 025083          237 DPD  239 (258)
Q Consensus       237 DPd  239 (258)
                      |++
T Consensus       156 d~~  158 (274)
T 3p8a_A          156 NQD  158 (274)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            765

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=91.91  E-value=1.8  Score=32.70  Aligned_cols=31  Identities=16%  Similarity=0.046  Sum_probs=25.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCC-EEeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGM-ELLRK   52 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~-~~~~~   52 (258)
                      ..++||+++|.+.+.+.++-+..+-. ++..+
T Consensus        42 ~~~DHIalRvn~~~~Ae~~~~~l~~~G~llSe   73 (192)
T 1k4n_A           42 LTADHISLRCHQNATAERWRRGFEQCGELLSE   73 (192)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEE
T ss_pred             ccCcEEEEecCCHHHHHHHHHHHHHhchhhhc
Confidence            57899999999999999999988864 45443

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=89.21  E-value=0.86  Score=43.14  Aligned_cols=33  Identities=15%  Similarity=0.186  Sum_probs=24.3

Q ss_pred             ccceeeEEEEEeC---CHHHHHHHHHHhcCCEEeee
Q 025083           20 DKRRFLHAVYRVG---DLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        20 ~~~~~~hv~l~v~---dl~~s~~FY~~~lG~~~~~~   52 (258)
                      ++.+...+.+...   -++++++||++.|+++....
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   41 (941)
T 3opy_B            6 LFNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKN   41 (941)
T ss_dssp             CSCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSS
T ss_pred             eecceeEEEEEeCCHHHHHHHHHHHHhhccceeccc
Confidence            3456666776664   68899999999999987653

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=84.09  E-value=11  Score=35.96  Aligned_cols=51  Identities=22%  Similarity=0.165  Sum_probs=35.1

Q ss_pred             eeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          191 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       191 ~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      ..+.|.+.|+..+.+.|    .+..++  .-|....   -..+|..||=||.|.|.....
T Consensus       125 ~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~---~~~~~~~dp~~~~~~~~~~~~  175 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKL----IEIGAE--IIPSKID---LVEFSTRDPMGDVISFSSYPS  175 (989)
T ss_dssp             CEEEEECSCHHHHHHHH----HHSSCC--BCCCC-----CCCEEEESSSEEEEECCSSSC
T ss_pred             ceEEEEeCcHHHHHHHh----hhcccc--cCCCCCC---ceeEEEecCCCCEEeeecCCC
Confidence            46889999999888888    554222  2222221   146899999999999876554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	258
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	9e-17
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-12
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	1e-14
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	1e-12
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	1e-12
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	1e-05
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	4e-11
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-10
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	1e-08
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	1e-06
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	1e-08
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	4e-08
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	6e-05
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	7e-08
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	0.001
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	9e-08
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	8e-04
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	3e-07
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	1e-04
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-05
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	2e-04
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	1e-05
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	3e-05
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	0.002
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	3e-05
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	1e-04
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	9e-05
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	1e-04
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	3e-04
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	3e-04
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	4e-04
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	4e-04
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	0.001
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	0.001
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	0.002
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	0.002
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	0.002
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	0.002
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	0.002
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	0.003
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	0.003
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	0.003

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 72.4 bits (176), Expect = 9e-17
 Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 4/132 (3%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
            MLRVGDL RSI FY K LGMKLLRT ++PE K +LA +GY  E +  V+EL Y++GV +
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK 65

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 243
           Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG+K 
Sbjct: 66  YELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 244 VLVDNEDFLKEL 255
            L++ +D  + L
Sbjct: 122 ELIEEKDAGRGL 133

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 61.2 bits (147), Expect = 1e-12
 Identities = 51/132 (38%), Positives = 70/132 (53%), Gaps = 33/132 (25%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R LH + RVGDL R+I +YT+  GM+LLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHLAIATED---------------------------------DPDGYIF 109
           GV  Y++GT +GH+A++ ++                                 DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 110 ELIQRGPTPEPL 121
           ELI+       L
Sbjct: 122 ELIEEKDAGRGL 133

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 67.0 bits (162), Expect = 1e-14
 Identities = 60/127 (47%), Positives = 72/127 (56%), Gaps = 28/127 (22%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           RR LH + RVGDLDR+IK+YTE  GM++LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 82  YGVTSYDIGTGFGHLAIATED----------------------------DPDGYIFELIQ 113
           YGVTSY     +GH+AI  ED                            DPDGY  EL+ 
Sbjct: 62  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLN 121

Query: 114 RGPTPEP 120
                E 
Sbjct: 122 EKTMMEK 128

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 61.6 bits (148), Expect = 1e-12
 Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
            M+RVGDL RSIKFY + LGMK+LR  D PE K  L  LGY  E  +TVLEL Y+YGVT 
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS 66

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 243
           Y    AY  +AI  +DV +    +    ++    I  +       +  +   VDPDG+  
Sbjct: 67  YKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDE-----SGFMAFVVDPDGYYI 117

Query: 244 VLVDNEDFLKE 254
            L++ +  +++
Sbjct: 118 ELLNEKTMMEK 128

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 61.8 bits (149), Expect = 1e-12
 Identities = 17/133 (12%), Positives = 40/133 (30%), Gaps = 10/133 (7%)

Query: 121 LCQVMLRV----GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELA 176
                +R+    G L   I+FYE+ L +K +           +       +      +  
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYE 65

Query: 177 YSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 236
                      +       +  ++      +    + +G +      P         +  
Sbjct: 66  GGSTAPVPHPDSLLVFYVPNAVELAAITSKL----KHMGYQEVESENPYWSNGG--VTIE 119

Query: 237 DPDGWKTVLVDNE 249
           DPDGW+ V ++++
Sbjct: 120 DPDGWRIVFMNSK 132

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 41.8 bits (97), Expect = 1e-05
 Identities = 13/102 (12%), Positives = 23/102 (22%), Gaps = 5/102 (4%)

Query: 23  RFLHAVYRV----GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVEL 78
            F  A  R+    G LD  I++Y E   ++ +         Y     G      +     
Sbjct: 5   SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIG-EFSQHNGYDGVMFGLPHADYHLEFTQ 63

Query: 79  TYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEP 120
                              +    +      +L   G     
Sbjct: 64  YEGGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVE 105

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (139), Expect = 4e-11
 Identities = 33/156 (21%), Positives = 53/156 (33%), Gaps = 26/156 (16%)

Query: 115 GPTPEP----LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQT 170
              P      L Q MLRV D  +S+ FY + LGM L++  D P +K +L  L Y +++  
Sbjct: 14  DADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDI 73

Query: 171 TVLELA--------------------YSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 210
              +                             Y  GN+  +                  
Sbjct: 74  PKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKR 133

Query: 211 TQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV 246
            +ELG K  ++P         +    DPDG+   ++
Sbjct: 134 FEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEIL 167

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (133), Expect = 3e-10
 Identities = 32/151 (21%), Positives = 49/151 (32%), Gaps = 55/151 (36%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVE----- 77
                + RV D  +++ +YT   GM L++K D P  K+S  FL +  +      +     
Sbjct: 23  LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIA 82

Query: 78  ----------LTYNYGVTSYD---------IGTGFGHLAIATED---------------- 102
                     LT+N+G    +            GFGH+ IA  D                
Sbjct: 83  WALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFV 142

Query: 103 ---------------DPDGYIFELIQRGPTP 118
                          DPDGY  E++      
Sbjct: 143 KKPDDGKMKGLAFIQDPDGYWIEILNPNKMA 173

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 50.4 bits (119), Expect = 1e-08
 Identities = 8/134 (5%), Positives = 24/134 (17%), Gaps = 35/134 (26%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +   H      + +    +Y    G+  ++     ++             S       + 
Sbjct: 5   KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFE 64

Query: 82  YGVT--SYDIGTGFGHLAIATED---------------------------------DPDG 106
             +   +Y        + +                                     D +G
Sbjct: 65  IPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 124

Query: 107 YIFELIQRGPTPEP 120
               L+        
Sbjct: 125 LRLVLLVSNGEKVE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 44.6 bits (104), Expect = 1e-06
 Identities = 15/129 (11%), Positives = 34/129 (26%), Gaps = 6/129 (4%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLR--TIDSPELKCALAMLGYAEEDQTTVLELAYSYGV 181
           + +   +   +  FY+  LG++ ++            L          T +         
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG 69

Query: 182 TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW 241
             Y   NA  ++ +                +       +        N     F D +G 
Sbjct: 70  RTYRGTNAITRIGLLVPSEDSLHYWKERFEK----FDVKHSEMTTYANRPALQFEDAEGL 125

Query: 242 KTVLVDNED 250
           + VL+ +  
Sbjct: 126 RLVLLVSNG 134

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 1e-08
 Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 9/107 (8%)

Query: 17  PKKDKRRFL---HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
           PK ++ RFL      + VG+  +   +Y    G E L  + +               +  
Sbjct: 2   PKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIV 61

Query: 74  FVVELTYNYGVTSYDI-----GTGFGHLAIATEDDPDGYIFELIQRG 115
           FV+    N             G G   +A    +D +  + +  +RG
Sbjct: 62  FVLCSALNPWNKEMGDHLVKHGDGVKDIAFEV-EDCEHIVQKARERG 107

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 49.4 bits (117), Expect = 4e-08
 Identities = 24/135 (17%), Positives = 41/135 (30%), Gaps = 9/135 (6%)

Query: 17  PKKDK---RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
           PK DK   +RF H  +  GD     + ++   GM    K D+      +A          
Sbjct: 3   PKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLR 62

Query: 74  FVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGR 133
           F+    Y+  +++ +I         + +       F     G        V + V D   
Sbjct: 63  FLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGV-----RAVAIEVEDAES 117

Query: 134 SIKFYEKALGMKLLR 148
           +      A G     
Sbjct: 118 AFS-ISVANGAIPSS 131

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.2 bits (93), Expect = 6e-05
 Identities = 19/153 (12%), Positives = 35/153 (22%), Gaps = 38/153 (24%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           +    GD     + +   LGM+     D        A       D   +    YS  ++ 
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSA 75

Query: 184 -----------------------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR 220
                                   + G     VAI  +D   +  +        G   + 
Sbjct: 76  GEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSS 131

Query: 221 QPGPIPGL----------NTKITSFVDPDGWKT 243
            P  +             +  +  +V      T
Sbjct: 132 PPIVLNEAVTIAEVKLYGDVVLR-YVSYKAEDT 163

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 48.7 bits (115), Expect = 7e-08
 Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 9/102 (8%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
           +     V+ VG+  +   YY+  FGM+L+            A        + FV+     
Sbjct: 6   KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 65

Query: 82  YGVTSYDI--------GTGFGHLAIATEDDPDGYIFELIQRG 115
                           G G   LAI    D        I+ G
Sbjct: 66  PATPWGHFLADHVAEHGDGVVDLAIEV-PDARAAHAYAIEHG 106

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 36.4 bits (83), Expect = 0.001
 Identities = 21/138 (15%), Positives = 38/138 (27%), Gaps = 14/138 (10%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           V+  VG+  ++  +Y  A GM+L+            A           VL          
Sbjct: 11  VVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPW 70

Query: 184 Y--------TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF 235
                      G+    +AI   D   +         E G +   +P  +   +  +   
Sbjct: 71  GHFLADHVAEHGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLA 126

Query: 236 V--DPDGWKTVLVDNEDF 251
                   +  LVD   +
Sbjct: 127 AIATYGKTRHTLVDRTGY 144

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 48.7 bits (115), Expect = 9e-08
 Identities = 19/122 (15%), Positives = 34/122 (27%), Gaps = 21/122 (17%)

Query: 17  PKKDK---RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSY 73
           P+ D+     F H      D       ++   G  L  + D+     ++A L        
Sbjct: 4   PRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLS 63

Query: 74  FVVELTYNYGVTSYDI-----------------GTGFGHLAIATEDDPDGYIFELIQRGP 116
           F+    Y +G  +                    G     +A+   D  D +    +  G 
Sbjct: 64  FLFTAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFR-ASVAAGA 122

Query: 117 TP 118
            P
Sbjct: 123 RP 124

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 36.8 bits (84), Expect = 8e-04
 Identities = 18/117 (15%), Positives = 27/117 (23%), Gaps = 13/117 (11%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           V L   D   +   +   LG  L    D      A A L       + +    Y++G   
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADA 76

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVT-------------QELGGKITRQPGPIPG 227
            T        A +          V  V                 G +    P  +  
Sbjct: 77  ATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR 133

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 46.8 bits (110), Expect = 3e-07
 Identities = 25/149 (16%), Positives = 41/149 (27%), Gaps = 29/149 (19%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKY---------------------- 60
           RF HA+    +L  T   +T+  G  L  +                              
Sbjct: 5   RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEK 64

Query: 61  ----SNAFLGFGPEQSYFVVELTYNYGVTSYD--IGTGFGHLAIATEDDPDGYIFELIQR 114
                 +F     E      +L      +        G  H       DP G   E+   
Sbjct: 65  GRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG 124

Query: 115 GPTPEPLCQ-VMLRVGDLGRSIKFYEKAL 142
           G    P  + V      LG++I ++++ L
Sbjct: 125 GDYNYPDHKPVTWTTDQLGKAIFYHDRIL 153

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 39.1 bits (90), Expect = 1e-04
 Identities = 14/119 (11%), Positives = 31/119 (26%), Gaps = 13/119 (10%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
            ++   +L  +   + K LG  L   +                      L L+       
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDEN-----------GTRVAQFLSLSTKAHDVA 57

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITS--FVDPDG 240
           +       ++   +  +    +++           +   GP     T   +  F DP G
Sbjct: 58  FIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 41.8 bits (97), Expect = 1e-05
 Identities = 17/117 (14%), Positives = 31/117 (26%), Gaps = 10/117 (8%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           +   V DL R  +  E     + +    S   + +L+   +       V  +        
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVY--ASDTEQFSLSREKFFLIGDIWVAIMQGEKLAER 65

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
                A+       D   +          +LG  +      + G    I  F D D 
Sbjct: 66  SYNHIAFKIDDADFDRYAERVG-------KLGLDMRPPRPRVEGEGRSIY-FYDDDN 114

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 38.4 bits (88), Expect = 2e-04
 Identities = 14/117 (11%), Positives = 26/117 (22%), Gaps = 27/117 (23%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYN 81
               H  + V DL+R  +     F    +   D  +   S        +    +++    
Sbjct: 3   EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL 62

Query: 82  YGVTSYDIGTGFGHLAIATED---------------------------DPDGYIFEL 111
              +   I                                        D D ++FEL
Sbjct: 63  AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFEL 119

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 42.6 bits (100), Expect = 1e-05
 Identities = 15/91 (16%), Positives = 25/91 (27%), Gaps = 10/91 (10%)

Query: 22  RRFLHAVYRV--GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELT 79
           +   H  + V  G +     +Y + F     R  D+  E                 + L 
Sbjct: 4   KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLN 63

Query: 80  YNYGVTSYDIG--------TGFGHLAIATED 102
                 +  I          G  H+A  T+D
Sbjct: 64  EESSKGAGQIEEFLMQFNGEGIQHVAFLTDD 94

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 41.6 bits (97), Expect = 3e-05
 Identities = 22/107 (20%), Positives = 35/107 (32%), Gaps = 14/107 (13%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRD-----VPEEKYSNAFLGFGPEQSYFVV 76
            RF H V  V +L     Y+    G     +         E   ++  L    E     +
Sbjct: 8   SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPL 67

Query: 77  -ELTYNYGVTS-------YDIGTGFGHLAIATEDDPDGYIFELIQRG 115
            E  +     S       +  G G  H+A+A+ DD    + E+  R 
Sbjct: 68  NEPVHGTKRRSQIQTFLDHHGGPGVQHMALAS-DDVLRTLREMQARS 113

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 10/91 (10%), Positives = 31/91 (34%), Gaps = 13/91 (14%)

Query: 128 VGDLGRSIKFYEKALGMKLLRTIDSPELK------CALAMLGYAEEDQTTVLELAYSYGV 181
           V +L  +  ++    G        + ++        ++ +   +E     + E  +    
Sbjct: 17  VPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKR 76

Query: 182 T-------EYTKGNAYAQVAISTDDVYKSAE 205
                   ++  G     +A+++DDV ++  
Sbjct: 77  RSQIQTFLDHHGGPGVQHMALASDDVLRTLR 107

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 40.7 bits (94), Expect = 3e-05
 Identities = 18/120 (15%), Positives = 29/120 (24%), Gaps = 24/120 (20%)

Query: 18  KKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVE 77
            K   R  H   RV D+ + +++Y E  G+  + + D                      +
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREAD 61

Query: 78  ------------------------LTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQ 113
                                   + Y   V     G             P G+ FEL  
Sbjct: 62  EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYA 121

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 39.2 bits (90), Expect = 1e-04
 Identities = 13/117 (11%), Positives = 28/117 (23%), Gaps = 13/117 (11%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
           V LRV D+ ++++ Y + LG+  +                               + +  
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDR-------------DDQGRVYLKAWTEVDKFSLVL 57

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
                              +   +       G  + + P        +   F  P G
Sbjct: 58  READEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSG 114

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 39.7 bits (92), Expect = 9e-05
 Identities = 18/123 (14%), Positives = 32/123 (26%), Gaps = 29/123 (23%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRK----------------------------R 53
           +        V  LD+     TE FG   + +                            +
Sbjct: 11  QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQSIKGEAFGEIVVKYLDGPTEK 70

Query: 54  DVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQ 113
                 +  A       +  +  E     G  S  I   F   ++    + +G +FE+  
Sbjct: 71  PGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYF-RESNGILFEIAT 129

Query: 114 RGP 116
            GP
Sbjct: 130 DGP 132

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 39.2 bits (90), Expect = 1e-04
 Identities = 20/130 (15%), Positives = 34/130 (26%), Gaps = 23/130 (17%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMEL----------------------LRKRD 54
           P  D  R  +    V DL ++ ++Y +  G+ +                      LR+  
Sbjct: 10  PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGP 69

Query: 55  VPEEKYSNAFLGFGPEQSYFVVELT-YNYGVTSYDIGTGFGHLAIATEDDPDGYIFELIQ 113
           +         +    E                    G   G       +DP G+ +E   
Sbjct: 70  IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFY 129

Query: 114 RGPTPEPLCQ 123
                E L Q
Sbjct: 130 ETEHVERLTQ 139

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 38.1 bits (87), Expect = 3e-04
 Identities = 17/129 (13%), Positives = 40/129 (31%), Gaps = 14/129 (10%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKC---------ALAMLGYAEEDQTTVLE 174
           V + V  L  +I F+E  +G+ L    +                + +      D  + +E
Sbjct: 13  VSIVVESLDNAISFFE-EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIE 71

Query: 175 LAYSYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL---GGKITRQPGPIPGLNTK 231
           L+                 A+    V  + E ++ +   L   G ++  +       + +
Sbjct: 72  LSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYR 130

Query: 232 ITSFVDPDG 240
           +      +G
Sbjct: 131 LCYIRGVEG 139

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 38.3 bits (88), Expect = 3e-04
 Identities = 17/118 (14%), Positives = 33/118 (27%), Gaps = 9/118 (7%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE 183
                 D+ R   + E  LG ++   I   +     A +   +          +   +T 
Sbjct: 9   FNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTV--------HDTALTG 59

Query: 184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW 241
                 +     + +          +    +  +I R PG     N      +DPDG 
Sbjct: 60  GNGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 37.9 bits (87), Expect = 4e-04
 Identities = 17/118 (14%), Positives = 26/118 (22%), Gaps = 30/118 (25%)

Query: 23  RFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNY 82
           R  H      D+ R   Y  E  G  +       +     A++          +      
Sbjct: 5   RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGP 63

Query: 83  GVTSYDIGTGFGHLAIATED-----------------------------DPDGYIFEL 111
            +      T   H  I   D                             DPDG+  E+
Sbjct: 64  RMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEI 121

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 37.7 bits (86), Expect = 4e-04
 Identities = 22/133 (16%), Positives = 36/133 (27%), Gaps = 45/133 (33%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVV--ELTYNYG 83
           H  Y   D D   KYY E FG   L + + PE+      +    + +  +   ++     
Sbjct: 10  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 69

Query: 84  VTS--------YDIGTGFGHLAIATED--------------------------------- 102
             S        ++   G  H+A   +D                                 
Sbjct: 70  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMH 129

Query: 103 --DPDGYIFELIQ 113
                G + EL Q
Sbjct: 130 PKSGKGVLIELTQ 142

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 35.4 bits (80), Expect = 0.001
 Identities = 13/111 (11%), Positives = 26/111 (23%), Gaps = 21/111 (18%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELLRK--RDVPEEKYSNAFLGFGPEQSYFVVELT 79
           RR + A     +  R   +Y +  GM +       V       A       +        
Sbjct: 2   RR-VVANIATPEPARAQAFYGDILGMPVAMDHGWIVTHASPLEAHAQVSFAREGGSGTDV 60

Query: 80  YNYGVTSYDIGTGFGHLAIATED------------------DPDGYIFELI 112
            +  +   +       +  A                     DP G +  ++
Sbjct: 61  PDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL 111

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 35.8 bits (81), Expect = 0.001
 Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 26/110 (23%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRK------------------------RDVPEEKYS 61
           H    V DL +++ ++ E  G+ L  +                            E  Y+
Sbjct: 7   HLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVPPQESDYT 66

Query: 62  NAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATEDDPDGYIFEL 111
           +       E    + +     GVT +      G        DPDG+  EL
Sbjct: 67  HYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFL--DPDGHKLEL 114

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLLR 148
           + L V DL +S+ F+ + LG+ L  
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHA 32

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 14/116 (12%), Positives = 31/116 (26%), Gaps = 12/116 (10%)

Query: 125 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEY 184
           +L   D+  +++F+   LG   +   D      A  +        + V +          
Sbjct: 9   VLTARDVAEAVEFWTDRLGFSRVFVEDD----FAGVVRDDVTLFISAVQDQVVPDN--TQ 62

Query: 185 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
                     +  +     +      +     +I  QP        +  +  DP G
Sbjct: 63  AWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPW------GREFALRDPAG 112

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 34.7 bits (78), Expect = 0.002
 Identities = 14/106 (13%), Positives = 24/106 (22%), Gaps = 20/106 (18%)

Query: 26  HAVYRVGDLDRTIKYYTECFGMELLRKRD---------------VPEEKYSNAFLGFGPE 70
           H    V D+    ++  + FG+     R                + + K       F   
Sbjct: 6   HLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEVQYPKTFHVG 65

Query: 71  QSYFVVELTYNYGVTSYDIGTGFGHLAIATED-----DPDGYIFEL 111
                 E          + G        A         P G+  E+
Sbjct: 66  FPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEV 111

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 34.7 bits (78), Expect = 0.002
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 124 VMLRVGDLGRSIKFYEKALGMKLL 147
           + L V D+  + +F EK  G+   
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCS 30

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 34.8 bits (79), Expect = 0.002
 Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 16/118 (13%)

Query: 123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT 182
           Q+ + V ++ +     E  L  K              A  G+A+    +   +     + 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADY-----------ANDGFAQFTIGSHCLMLSQNHLV 53

Query: 183 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 240
                 +   + I  +DV ++ + +N +  ++    T          T+      P G
Sbjct: 54  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-----GTESLLVQGPAG 106

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 34.9 bits (79), Expect = 0.003
 Identities = 5/27 (18%), Positives = 11/27 (40%)

Query: 22 RRFLHAVYRVGDLDRTIKYYTECFGME 48
           R  +  + V D+     + T+  G+ 
Sbjct: 3  ERLGYLGFAVKDVPAWDHFLTKSVGLM 29

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 34.9 bits (79), Expect = 0.003
 Identities = 21/109 (19%), Positives = 33/109 (30%), Gaps = 19/109 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKYYTECFGMELL-RKRDVPEEKYSNAFLGFGPEQSYFVVELTY 80
               H    V DL  +I +Y +  G  L  R       +  + +L    E  Y      Y
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSREPQYGGPAADY 62

Query: 81  N---YGVTSYDIGTGFGHLA-----IATED----------DPDGYIFEL 111
               +G+ + D       L         ++          DPDG+  E 
Sbjct: 63  THYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 34.9 bits (79), Expect = 0.003
 Identities = 6/33 (18%), Positives = 12/33 (36%)

Query: 22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRD 54
          R   +  + V D+     + T+  G+      D
Sbjct: 3  RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	258
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.85
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.81
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.81
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.8
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.8
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.8
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.79
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.78
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.78
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.77
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.77
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.76
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.76
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.76
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.75
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.75
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.74
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.73
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.73
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.73
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.73
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.71
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.71
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.7
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.67
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.62
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.61
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.58
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.57
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.54
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.52
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.5
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.5
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.49
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.45
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.45
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.44
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.44
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.44
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.43
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.43
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.42
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.4
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.37
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.37
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.36
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.35
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.34
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.32
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.32
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.28
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.27
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.21
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.16
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.16
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.15
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.1
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.1
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.02
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.02
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.02
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	98.93
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.92
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	98.91
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.9
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.81
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	98.81
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.77
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	98.76
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.75
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.75
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.63
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.43
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	98.41
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.41
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	97.53
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.13
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	97.02
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	94.64
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	90.95
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	90.71

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=2.4e-20  Score=135.67  Aligned_cols=132  Identities=45%  Similarity=0.793  Sum_probs=93.0

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      +++.|++|+|+|+++|++||+++|||++...............+........................+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            47899999999999999999999999988776544333333333322221122222222222222334457899999999


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhhhHh
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  254 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  254 (258)
                      ++++..+++    +++|..+..+|...+.++.+++||+|||||+|||++..+-.+.
T Consensus        81 ~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~  132 (135)
T d1f9za_          81 NAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRG  132 (135)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC------
T ss_pred             HHHHHHHHH----HHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCcccc
Confidence            999999888    8999999988877777667899999999999999998765443

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.81  E-value=3.9e-19  Score=134.06  Aligned_cols=123  Identities=11%  Similarity=0.094  Sum_probs=90.4

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..+++||.|.|+|+++|++||+++|||++.++...........++..+..  .....+...      ....+.+|++|.+
T Consensus         3 ~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~h~~~~~   74 (162)
T d1mpya2           3 AVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIHH------PEKGRLHHVSFHL   74 (162)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEEC------SSSSEEEEEEEEC
T ss_pred             cccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccc--ccccccccc------CCCCccceeEEEE
Confidence            46799999999999999999999999999887655544444455444332  222222111      2235799999999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      .+++++ .++.++|++.|+++..+|..+..+..+++||+|||||+|||++..
T Consensus        75 ~~~~~~-~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~  125 (162)
T d1mpya2          75 ETWEDL-LRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  125 (162)
T ss_dssp             SCHHHH-HHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             eeehhh-hhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECC
Confidence            986543 344456699999999888777665668999999999999998653

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.81  E-value=1.6e-19  Score=128.37  Aligned_cols=114  Identities=19%  Similarity=0.094  Sum_probs=85.7

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      +.++|+.|.|+|+++|.+||+++||++.....+    ++  +.+..+    ...+.+........... +...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~--~~~~~g----~~~l~l~~~~~~~~~~~-~~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIG----SHCLMLSQNHLVPLENF-QSGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEET----TEEEEEESSCSSSCCCC-CSCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----Ce--EEEEEc----CceeeeeecccCCCCCC-CcceEEEEEEC
Confidence            358999999999999999999999999766432    22  344543    34455544332211122 23346999999


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      |++++++++    +++|+++..+|...++ +.+.+||+|||||.|||++.
T Consensus        70 D~d~~~~~l----~~~G~~i~~~~~~~~~-g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHH----HHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHH----HhhccccccceEEeeC-CeEEEEEECCCCCEEEEEEe
Confidence            999999999    8999999998877765 45899999999999999874

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.80  E-value=7.8e-19  Score=130.14  Aligned_cols=123  Identities=15%  Similarity=0.227  Sum_probs=89.9

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCC-----------ccceeEEEeeecCCCceeEEEEEEe---cCCcc
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP-----------ELKCALAMLGYAEEDQTTVLELAYS---YGVTE  183 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~---~~~~~  183 (258)
                      ..+++|++|.|+|+++|.+||++ |||++..+....           +....++++.....  ...+.|...   .....
T Consensus         7 ~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           7 LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCB
T ss_pred             CCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeeccc--ceEEEEEeeccccCccc
Confidence            45799999999999999999998 999987654321           22345566654432  334444332   11111


Q ss_pred             ----cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          184 ----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       184 ----~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                          .....|+.|++|.|+|+++++++|    +++|+++..+|....+ +.+++|++||||+.|||+|.
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHH----HHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence                112348999999999999999999    8999999888765543 56789999999999999975

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.80  E-value=8.2e-19  Score=129.54  Aligned_cols=129  Identities=13%  Similarity=0.117  Sum_probs=87.6

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCc-cceeEEEeeecCCCceeEEEEEEecCCccccc-CCceeeEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-LKCALAMLGYAEEDQTTVLELAYSYGVTEYTK-GNAYAQVAI  195 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~g~~hi~~  195 (258)
                      ..+|+||+|.|+|+++|++||+++|||++..+....+ ......+++.........+.+.......+... .++++|++|
T Consensus         4 i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf   83 (144)
T d1zswa1           4 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL   83 (144)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             ccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEE
Confidence            4689999999999999999999999999887654322 22333444433322334455544333222222 236899999


Q ss_pred             EECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          196 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       196 ~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      .|+|.++ ++.+.++++++|+.+.. +...  .+.+++||+|||||+|||++...
T Consensus        84 ~v~~~~~-l~~~~~~l~~~gv~~~~-~~~~--~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          84 LVPSEDS-LHYWKERFEKFDVKHSE-MTTY--ANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EESCHHH-HHHHHHHHHHTTCEECC-SEEE--TTEEEEEEECTTCCEEEEEECTT
T ss_pred             ecCCchh-HHHHhhhhhccceeeeC-cccc--CCeEEEEEECCCCCEEEEEEeCC
Confidence            9999433 34444555999998753 3333  24588999999999999998764

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.80  E-value=1.3e-19  Score=132.97  Aligned_cols=127  Identities=17%  Similarity=0.319  Sum_probs=88.8

Q ss_pred             CCceeeeEEe----cChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEE
Q 025083          119 EPLCQVMLRV----GDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVA  194 (258)
Q Consensus       119 ~~i~hv~l~v----~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  194 (258)
                      .++.|+.|+|    +|+++|++||+++|||++..+..... ++..+++..+.  ....+.+.......+...+.+.+|++
T Consensus         4 ~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~hla   80 (137)
T d1twua_           4 SSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLV   80 (137)
T ss_dssp             SSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEE
T ss_pred             CCCceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCC--CceeeecccccccccccccccCceEE
Confidence            3455655555    79999999999999999987654332 35666666544  25566666665544344455788999


Q ss_pred             EEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          195 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       195 ~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                      |.|+|.+++ +++.++|+++|+++..++.+.  ++.+.+||+||||++|||++.+..
T Consensus        81 f~v~~~~dv-~~~~~~l~~~G~~~~~~~~~~--~~~~~~~f~DPDG~~Iel~~~~~~  134 (137)
T d1twua_          81 FYVPNAVEL-AAITSKLKHMGYQEVESENPY--WSNGGVTIEDPDGWRIVFMNSKGI  134 (137)
T ss_dssp             EECCCHHHH-HHHHHHHHHTTCCEECCSSHH--HHSSEEEEECTTCCEEEEESSCCC
T ss_pred             EEeCCHHHH-HHHHHHHHHCCCeEeCCCCCC--CCceEEEEECCCCCEEEEEcCCCC
Confidence            999884332 233344599999998766542  345788999999999999987643

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.79  E-value=1.7e-18  Score=131.56  Aligned_cols=121  Identities=15%  Similarity=0.061  Sum_probs=83.2

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..+++||+|.|+|++++.+||+++|||++..+...    +...++..+.  ....+.+.....+...+...+++||+|.|
T Consensus        10 I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~HiAf~V   83 (170)
T d1zswa2          10 IQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ----EAIFQSIKGE--AFGEIVVKYLDGPTEKPGRGSIHHLAIRV   83 (170)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS----EEEEESSTTC--STTCEEEEECCSSBCBCCBTCEEEEEEEE
T ss_pred             hCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc----eEEEEeccCc--cceEEEeccccccccccCccccceEEEEe
Confidence            46899999999999999999999999999887531    2222222222  22223333222222222334789999999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +|. +.++++.++++++|+++. ++...  +.++.+||+|||||+|||+..
T Consensus        84 ~~~-~~l~~~~~~l~~~G~~~~-~~~~~--~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          84 KND-AELAYWEEQVKQRGFHSS-GIIDR--FYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             SSH-HHHHHHHHHHHHTTCCCC-CCEEC--SSEEEEEEECTTCCEEEEEEE
T ss_pred             CCh-HHHHHHHHHHHhcCCCcc-ccccC--CCEEEEEEECCCCcEEEEEEC
Confidence            994 455666677799999974 33332  335889999999999999875

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.78  E-value=1.9e-18  Score=132.00  Aligned_cols=122  Identities=18%  Similarity=0.173  Sum_probs=91.4

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      ...+|+||+|.|+|+++|++|| ++|||++..+.....+....+++..+.  .++.+.+...       ...+.+|++|.
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~--~~~~l~~~~~-------~~~~~~H~~f~   71 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQ--TVHDTALTGG-------NGPRMHHVAFA   71 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSS--SSCSEEEEES-------SBSEEEEEEEE
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCc--cccceecccc-------cCCCccceeEE
Confidence            3578999999999999999999 689999988766555555566776543  3555555422       13489999999


Q ss_pred             ECChHHHHHHHHHHHHHhCCe--eecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          197 TDDVYKSAEVVNLVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       197 v~d~~~~~~~l~~~~~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +.+++++.+ ..++++++|+.  +...|+++..+...++||+|||||+|||+...
T Consensus        72 ~~~~~~v~~-~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~  125 (176)
T d1f1ua2          72 THEKHNIIQ-ICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  125 (176)
T ss_dssp             CSSHHHHHH-HHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             eccchhHHH-HHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCC
Confidence            998765554 33566889985  45667776655567899999999999998643

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.78  E-value=1.5e-18  Score=122.54  Aligned_cols=112  Identities=16%  Similarity=0.137  Sum_probs=80.3

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      ++|+||.|.|+|++++.+||+++|||++..+...     ...++..+   ....+.+.....    ...++..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~----~~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMRDN---DGFILTLMKGKE----VQYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEECT---TCCEEEEEECSS----CCCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeeeec---ceeeeeeeeeec----ccccccceeeeeec
Confidence            5799999999999999999999999998876532     22333322   245555544322    22346789999999


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      |.+ .++++.++++++|+++..+|.    ..++.+||+|||||+|||.+
T Consensus        70 ~~~-~v~~~~~~l~~~G~~~~~~~~----~~~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          70 SEE-QVDKINQRLKEDGFLVEPPKH----AHAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             SHH-HHHHHHHHHHHTTCCCCCCEE----C-CEEEEEEETTTEEEEEEC
T ss_pred             ccc-chhhhhhhHHHcCCccccCCC----CceEEEEEECCCCCEEEEEC
Confidence            854 334555566999999865443    23478999999999999974

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.77  E-value=3.3e-18  Score=125.98  Aligned_cols=130  Identities=15%  Similarity=0.144  Sum_probs=90.6

Q ss_pred             CCCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeec--CCCceeEEEEEEecCCcc--------cc
Q 025083          116 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYA--EEDQTTVLELAYSYGVTE--------YT  185 (258)
Q Consensus       116 ~~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~l~~~~~~~~--------~~  185 (258)
                      .+..+|+||+|.|+|+++|.+||+++||++..........+.........  .......+++.+......        ..
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~   82 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   82 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccC
Confidence            35678999999999999999999999999987765444333333222210  112345667665433221        12


Q ss_pred             cCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEE--ECCCCCEEEEEcch
Q 025083          186 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF--VDPDGWKTVLVDNE  249 (258)
Q Consensus       186 ~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~--~DPdG~~iel~~~~  249 (258)
                      ...|++||+|.|+|+++.+++|    +++|+++..++.....++.+++|+  +||+|+.|||+|..
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l----~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCcceEEEEecchHHHHHHHH----HHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            3458999999999999999999    899999876542222223345555  79999999999863

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=5.8e-18  Score=129.14  Aligned_cols=127  Identities=29%  Similarity=0.535  Sum_probs=90.0

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCC---------------ceeEEEEEEecCCc-
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEED---------------QTTVLELAYSYGVT-  182 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~-  182 (258)
                      .+++|++|+|+|+++|++||+++|||++......+..++...++..+...               ......+....... 
T Consensus        22 ~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (176)
T d1qipa_          22 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED  101 (176)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGG
T ss_pred             eEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecccc
Confidence            46899999999999999999999999988766555445555555432210               01111111111110 


Q ss_pred             ----c----cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          183 ----E----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       183 ----~----~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                          .    .....|+.|+++.++|++++.++|    +++|+++..+|....  ..+++||+|||||.|||+++...
T Consensus       102 ~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l----~~~Gv~~~~~p~~g~--~~~~~f~~DPdG~~IElvq~~~~  172 (176)
T d1qipa_         102 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGK--MKGLAFIQDPDGYWIEILNPNKM  172 (176)
T ss_dssp             CTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCEEEECTTSSS--STTCEEEECTTCCEEEEECTTTG
T ss_pred             ccCcCccCCCCCccceeEEEeeHHHHHHHHHHH----HHCCCEEeeCCccCC--ceEEEEEECCCCCEEEEEeCCCC
Confidence                0    112238999999999999999999    899999999886533  34678899999999999998753

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.76  E-value=3.1e-18  Score=124.44  Aligned_cols=114  Identities=15%  Similarity=0.123  Sum_probs=83.8

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .+|+||+|.|+|++++++||+++|||++..+..      ..++++.+..  ++.+.+...       ...++.|++|.|.
T Consensus         3 ~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~l~~~-------~~~~~~h~~f~v~   67 (131)
T d1lgta1           3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSR--AWRIAVQQG-------EVDDLAFAGYEVA   67 (131)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEEC-------TTCEEEEEEEEES
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCC--ceEEEEecC-------CCCCceEEEEEEc
Confidence            468999999999999999999999999887643      2355665443  445555421       1247899999998


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccC--CCCCeeEEEEECCCCCEEEEEcc
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +.+ .++++.++|+++|+++...|...  ..+..+++||+|||||+|||+..
T Consensus        68 ~~~-dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          68 DAA-GLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             SHH-HHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             cHH-HHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence            743 33455556699999998877543  12234789999999999999754

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.76  E-value=8.4e-18  Score=124.43  Aligned_cols=117  Identities=19%  Similarity=0.173  Sum_probs=84.3

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..+|+||.|.|+|++++++||+++|||++..+...     ...+... .....+.+.+...       ...++.|++|.+
T Consensus        14 i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~-------~~~~~~h~~~~~   80 (146)
T d1f1ua1          14 IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDEN-----TIYLRSL-EEFIHHNLVLRQG-------PIAAVAAFAYRV   80 (146)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS-----EEEEECT-TCCSSCSEEEEEC-------SSCEEEEEEEEE
T ss_pred             CcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecCC-----ceeeecc-cccccceeecccc-------CCCCCceeeEee
Confidence            45799999999999999999999999998876431     2222222 2212333333221       124789999999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      .+. +.++++.++|+++|+++...|.....+.++++||+|||||+|||+..
T Consensus        81 ~~~-~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          81 KSP-AEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             SSH-HHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             ccc-hhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence            874 33445555669999999888877666556889999999999999865

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.76  E-value=1.9e-17  Score=120.46  Aligned_cols=126  Identities=40%  Similarity=0.665  Sum_probs=87.6

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .++.||+|.|+|+++|++||+++|||++..+.......................................+..++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            57899999999999999999999999998876544433333333332221121111111221212233446788999999


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhhhH
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  253 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  253 (258)
                      ++.+..+++    ...++++..++     ++.+++||+|||||+|||++......
T Consensus        82 ~~~~~~~~~----~~~~~~~~~~~-----~g~~~~~~~DPdGn~iEl~~~~~~~~  127 (139)
T d2c21a1          82 DVKELVADM----RKHDVPIDYED-----ESGFMAFVVDPDGYYIELLNEKTMME  127 (139)
T ss_dssp             CHHHHHHHH----HHTTCCEEEEC-----SSSSEEEEECTTSCEEEEEEHHHHHH
T ss_pred             hHHHHHHHH----HHcCCceeeCC-----CCcEEEEEECCCCCEEEEEECCCCCC
Confidence            999888888    78888887643     24588999999999999999776544

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.75  E-value=6.8e-18  Score=122.26  Aligned_cols=119  Identities=18%  Similarity=0.179  Sum_probs=81.6

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCcc-ceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL-KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      ..+|+|++|.|+|++++++||+++|||++......... .....++..+    ...+.+.....    ....+..|++|.
T Consensus         2 i~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~f~   73 (130)
T d1r9ca_           2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIMQGEK----LAERSYNHIAFK   73 (130)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEEECCC----CSSCCSCEEEEE
T ss_pred             CCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeeccccc----ccccceeeeeec
Confidence            35799999999999999999999999998876543321 1223334432    23344433221    223467889998


Q ss_pred             EC--ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          197 TD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       197 v~--d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      |+  |++++++++    +++|+++..++... .++++.+||+|||||+|||.+..
T Consensus        74 v~~~dv~~~~~~l----~~~gv~i~~~~~~~-~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          74 IDDADFDRYAERV----GKLGLDMRPPRPRV-EGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             CCGGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             ccHHHHHHHHHHH----HHCCCeEecCCccc-CCCEEEEEEECCCCCEEEEEECC
Confidence            75  577777777    89999987665433 33458899999999999998765

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.75  E-value=1e-17  Score=125.36  Aligned_cols=121  Identities=14%  Similarity=0.083  Sum_probs=87.4

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCC---ccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSP---ELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVA  194 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  194 (258)
                      ..+|+|++|.|+|++++.+||+++|||++......+   .......++.++..  ++.+.+...      +...+++|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~a~~~~------~~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAAF------PIPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------SCSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc--cceeeeccC------CCCCceeEEE
Confidence            468999999999999999999999999987654321   22334556665442  444444321      2234899999


Q ss_pred             EEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCC-EEEEEcc
Q 025083          195 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW-KTVLVDN  248 (258)
Q Consensus       195 ~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~-~iel~~~  248 (258)
                      |.|+|++++. ++.++|+++|+.+ .+|+++..+...++|++||||+ .+|+...
T Consensus        80 f~v~~~ddv~-~~~d~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          80 LQANTIDDVG-YAFDRLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             EEBSSHHHHH-HHHHHHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             EECCCHHHHH-HHHHHHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEecC
Confidence            9999976654 4456779999865 5777776555689999999998 6999654

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.74  E-value=9.1e-18  Score=122.10  Aligned_cols=115  Identities=16%  Similarity=0.116  Sum_probs=84.2

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..+|+||.|.|+|++++.+||+++|||++..+..      ..++++.+..  ++.+.+...       ...+..|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~~~~~-------~~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQR--AWRIAVQPG-------ELDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEEC-------TTCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeec--ceeeeeecc-------CCCCceEEEEEe
Confidence            3579999999999999999999999999887643      2355665442  444444321       134799999999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCC--CCeeEEEEECCCCCEEEEEcc
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~  248 (258)
                      .+.+ .++++.++++++|+++.+.+.....  +..+.+||+|||||+|||+..
T Consensus        67 ~~~~-dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          67 DDAA-ALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             SSHH-HHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             ccHH-HHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence            8844 3445556669999999987654311  124688999999999999854

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.1e-17  Score=124.27  Aligned_cols=128  Identities=17%  Similarity=0.203  Sum_probs=94.1

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccc--eeEEEeeecCCCceeEEEEEEecCCc--c-----cccCCc
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK--CALAMLGYAEEDQTTVLELAYSYGVT--E-----YTKGNA  189 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~--~-----~~~~~g  189 (258)
                      .+++||+|.|+|+++|++||+++|||+.......+...  .....+..+    ...+.|.......  +     ...+.|
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~g~G   85 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG----KIVFVLCSALNPWNKEMGDHLVKHGDG   85 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             eeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC----cEEEEEEeccCCCCchhhhhhhhCCCe
Confidence            47899999999999999999999999988765433322  223334432    3445554433221  1     124679


Q ss_pred             eeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCe--eEEEEECCCCCEEEEEcchhhhHh
Q 025083          190 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNT--KITSFVDPDGWKTVLVDNEDFLKE  254 (258)
Q Consensus       190 ~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~--~~~~~~DPdG~~iel~~~~~~~~~  254 (258)
                      +.||||.|+|+++++++|    +++|+++..+|.......+  ++++++.|+|..++|+++.+..++
T Consensus        86 ~~hiaf~V~di~~~~~~l----~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g~  148 (149)
T d1sqia1          86 VKDIAFEVEDCEHIVQKA----RERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGR  148 (149)
T ss_dssp             EEEEEEEEECHHHHHHHH----HHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSS
T ss_pred             EEEEEEEeccHHHHHHHH----HHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcCC
Confidence            999999999999999999    8999999988865433333  567889999999999998876654

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.73  E-value=2.3e-17  Score=115.85  Aligned_cols=107  Identities=15%  Similarity=0.160  Sum_probs=78.3

Q ss_pred             eeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHH
Q 025083          123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  202 (258)
Q Consensus       123 hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~  202 (258)
                      +..|.|+|+++|++||+++|||++....+     ....+.. +..  ...+ +......   ..+.+..|++|.++|+++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~-----~~~~~~~-~~~--~~~~-~~~~~~~---~~~~~~~~~~~~~~dvd~   72 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG-----WIVTHAS-PLE--AHAQ-VSFAREG---GSGTDVPDLSIEVDNFDE   72 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS-----SEEEEEE-EEE--EEEE-EEEESSS---BTTBCCCSEEEEESCHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc-----ceeEecc-ccc--ccee-eeccccc---CCCCceeEEEEEecCHHH
Confidence            57799999999999999999999876543     1222222 111  1111 2212111   223456789999999999


Q ss_pred             HHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEE
Q 025083          203 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  246 (258)
Q Consensus       203 ~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  246 (258)
                      +++++    +++|+++..+|...++ +.+.+|++|||||+|||+
T Consensus        73 ~~~~l----~~~g~~~~~~p~~~~~-g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          73 VHARI----LKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHH----HHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             HHHHH----HhhccccccCCeEcCC-CcEEEEEECCCCCEEEeC
Confidence            99999    8999999998877665 468999999999999986

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.73  E-value=4.7e-17  Score=119.33  Aligned_cols=116  Identities=22%  Similarity=0.272  Sum_probs=79.4

Q ss_pred             CCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          117 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       117 ~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      |..+|+||+|.|+|++++.+||+++|||++......      ..++..+.  ....+.+.... ........+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~------~~~~~~~~--~~~~l~~~~~~-~~~~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGD--LWVCLSYDEAR-QYVPPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT------EEEEEETT--EEEEEEECTTC-CCCCGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc------cccccccc--ccceeeccccc-ccCCCcCCccceeeee
Confidence            456899999999999999999999999998776431      23333332  13333322111 1112233467888888


Q ss_pred             EC--ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          197 TD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       197 v~--d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      ++  |++++.++|    +++|+++...|.    ..++.+||+|||||.|||.+..
T Consensus        72 ~~~~d~~~~~~~l----~~~Gv~~~~~~~----~~~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          72 VAEEDFEPLSQRL----EQAGVTIWKQNK----SEGASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             CCHHHHHHHHHHH----HHTTCCEEECCC----SSSEEEEEECTTCCEEEEEECC
T ss_pred             chHHHHHHHHHHH----HHCCCeEeecCC----CCceEEEEECCCCCEEEEEECC
Confidence            84  455555555    999999876542    2458899999999999997754

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.73  E-value=4.1e-17  Score=120.32  Aligned_cols=119  Identities=16%  Similarity=0.149  Sum_probs=79.9

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEEC
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTD  198 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~  198 (258)
                      .+|+||.|.|+|++++.+||+++|||++..+....    ...... ......+.+.+...       ...+..|+++.+.
T Consensus         6 ~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~~   73 (145)
T d1mpya1           6 MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG----RVYLKA-WTEVDKFSLVLREA-------DEPGMDFMGFKVV   73 (145)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS----CEEEEC-TTCCBSCSEEEEEC-------SSCEEEEEEEEES
T ss_pred             cEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC----ccceec-ccccceeecccccc-------Ccccceeeeeeeh
Confidence            46899999999999999999999999988764321    111111 12112333333221       1235667777776


Q ss_pred             ChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          199 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       199 d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      +.++ ++.+.++|+++|+++...|.....+.++.+||+|||||.|||+....
T Consensus        74 ~~~d-l~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          74 DEDA-LRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             CHHH-HHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             hHHH-HHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            6432 33444555999999988776554445689999999999999997543

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.71  E-value=2.7e-17  Score=118.81  Aligned_cols=119  Identities=17%  Similarity=0.146  Sum_probs=79.1

Q ss_pred             CceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEec-----CCc-ccccCCceeeE
Q 025083          120 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSY-----GVT-EYTKGNAYAQV  193 (258)
Q Consensus       120 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-----~~~-~~~~~~g~~hi  193 (258)
                      +|+|++|.|+|+++|++||++ |||.+.......  .+  +.+..+.   ...+.+....     ... ....+.+..|+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~--~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   73 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA--PH--TEAVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHRFAI   73 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC--SE--EEEECGG---GCEEEEEEHHHHHHHCTTCCCCCSSCSCEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCccccccccc--cc--eeeeccc---eeeeeecccccccccCCCCCCCccccceeE
Confidence            789999999999999999976 899876654322  12  2222222   2233332211     110 11223356789


Q ss_pred             EEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          194 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       194 ~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +|.|++++++ +++.++++++|+++..+|...++ +.+.+||+|||||+|||+++
T Consensus        74 ~~~v~~~~~l-~~~~~~l~~~G~~~~~~p~~~~~-G~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          74 AFEFPDTASV-DKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             EEECSSHHHH-HHHHHHHHHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEE
T ss_pred             eeeeccchhh-HHHHHHHHhccCccccCCeEcCC-CcEEEEEECCCCCEEEEEec
Confidence            9999985432 22334449999999998877665 46899999999999999875

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=7.3e-17  Score=117.39  Aligned_cols=112  Identities=25%  Similarity=0.253  Sum_probs=76.3

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      ..+|+||+|.|+|++++.+||+++||+++..+...      ..++..+.    ..+........  .....+..|++|.+
T Consensus         2 i~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~------~~~~~~~~----~~~~~~~~~~~--~~~~~~~~h~~~~~   69 (134)
T d1nkia_           2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ------GAYLELGS----LWLCLSREPQY--GGPAADYTHYAFGI   69 (134)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEEETT----EEEEEEECTTC--CCCCSSSCEEEEEE
T ss_pred             CCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc------eeeeecCC----eEEEEeeeccc--cccccccccchhcc
Confidence            35799999999999999999999999998876532      12333322    22333222211  12233566777666


Q ss_pred             --CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          198 --DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       198 --~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                        +|+++++++|    +++|+++..++    .+.++.+||+|||||+|||....
T Consensus        70 ~~~dl~~~~~~l----~~~G~~~~~~~----~~~~~~~~f~DPdGn~iEl~~~~  115 (134)
T d1nkia_          70 AAADFARFAAQL----RAHGVREWKQN----RSEGDSFYFLDPDGHRLEAHVGD  115 (134)
T ss_dssp             CHHHHHHHHHHH----HHTTCCEEECC----CSSSCEEEEECTTCCEEEEESCC
T ss_pred             ccchHHHHHHHH----HHCCCcCccCC----CcceeEEEEECCCCCEEEEEECC
Confidence              4666666666    89999986543    22357899999999999998754

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.70  E-value=4.5e-17  Score=122.66  Aligned_cols=126  Identities=17%  Similarity=0.243  Sum_probs=94.1

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCcc--ceeEEEeeecCCCceeEEEEEEecCCcc----------cc
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPEL--KCALAMLGYAEEDQTTVLELAYSYGVTE----------YT  185 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~~  185 (258)
                      ..+|+||+|.|+|+++|++||+++|||++......+..  ....+.++.+    ...+.|........          ..
T Consensus         5 i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~   80 (163)
T d1t47a1           5 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAE   80 (163)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCccccccchhhhc
Confidence            46799999999999999999999999998876543322  2233445432    34566655432210          12


Q ss_pred             cCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCC--eeEEEEECCCCCEEEEEcchhh
Q 025083          186 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLN--TKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       186 ~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~~  251 (258)
                      .+.|+.||+|.|+|+++++++|    +++|+++..+|....+..  .+++++++|+|..++|+++...
T Consensus        81 ~g~G~~hiaf~VdDid~a~~~l----~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~  144 (163)
T d1t47a1          81 HGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGY  144 (163)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEE
T ss_pred             CCCceEEEEEeeCCHHHHHHHH----HHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCC
Confidence            4669999999999999999999    899999999886643333  3678899999999999987653

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=4.7e-16  Score=117.41  Aligned_cols=129  Identities=14%  Similarity=0.088  Sum_probs=90.1

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCc--------------c-
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVT--------------E-  183 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--------------~-  183 (258)
                      .+++||+|.|+|++++++||+++|||+...+...+..............  ...+.+.......              + 
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~   88 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG--DLRFLFTAPYSPSLSAGEIKPTTTASIPS   88 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET--TEEEEEEEECCGGGTTTCCGGGCCCSSTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC--CeeEEEecccccccccccccccccccccc
Confidence            5789999999999999999999999998877543332222222111111  1222221111000              0 


Q ss_pred             ----------cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhhhH
Q 025083          184 ----------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  253 (258)
Q Consensus       184 ----------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  253 (258)
                                ...+.|+.||||.|+|+++++++|    +++|+++..+|....+ +.++++++.+.+...+|+++.+...
T Consensus        89 ~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l----~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~~~~~  163 (167)
T d1sqda1          89 FDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAEDT  163 (167)
T ss_dssp             CCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC--
T ss_pred             CCcchHHHhhhccCCCceEEEEEeCCHHHHHHHH----HHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecCCCcc
Confidence                      012458999999999999999999    8999999999877654 4688999999999999999976554


Q ss_pred             h
Q 025083          254 E  254 (258)
Q Consensus       254 ~  254 (258)
                      +
T Consensus       164 ~  164 (167)
T d1sqda1         164 E  164 (167)
T ss_dssp             -
T ss_pred             c
Confidence            4

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.62  E-value=2.4e-15  Score=114.06  Aligned_cols=125  Identities=15%  Similarity=0.078  Sum_probs=90.6

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccc--eeEEEeeecCCCceeEEEEEEecCC--c----------c
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELK--CALAMLGYAEEDQTTVLELAYSYGV--T----------E  183 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~--~----------~  183 (258)
                      ..+++||+|.|+|++++++||+++|||+...+.....+.  +....++.+    ...+.+......  .          +
T Consensus        11 i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (172)
T d1sp8a1          11 TLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATAALPSFSA   86 (172)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGCSSTTCCH
T ss_pred             cCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC----CeeeEEeeccCCCchhhhcccccCCc
Confidence            357999999999999999999999999998765433322  222233322    222222221110  0          0


Q ss_pred             -------cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchhh
Q 025083          184 -------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  251 (258)
Q Consensus       184 -------~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  251 (258)
                             ...+.|+.||+|.|+|++++++++    +++|+++..+|....+ +.++++++.|.+..++|++..+-
T Consensus        87 ~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l----~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          87 AAARRFAADHGLAVRAVALRVADAEDAFRAS----VAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             HHHHHHHHHHSSEEEEEEEEESCHHHHHHHH----HTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTT
T ss_pred             chhhhhhhhcCCceEEEEEeeCcHHHHHHHH----HHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCCC
Confidence                   113569999999999999999999    9999999999876544 45889999998889999988853

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=8.2e-15  Score=105.73  Aligned_cols=97  Identities=52%  Similarity=0.992  Sum_probs=65.3

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~  101 (258)
                      ||+.|++|+|+|+++|++||+++|||++..+..........+.+...........+............+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            78999999999999999999999999998776555544444444332222222222322222233334457788999998


Q ss_pred             C---------------------------------CCCCcEEEEEECCCCC
Q 025083          102 D---------------------------------DPDGYIFELIQRGPTP  118 (258)
Q Consensus       102 d---------------------------------DP~G~~iel~~~~~~~  118 (258)
                      +                                 ||||+.|||++.....
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~  130 (135)
T d1f9za_          81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  130 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC----
T ss_pred             HHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCcc
Confidence            7                                 9999999999976433

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.58  E-value=2e-14  Score=102.14  Aligned_cols=106  Identities=23%  Similarity=0.296  Sum_probs=72.4

Q ss_pred             eEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHHH
Q 025083          125 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  204 (258)
Q Consensus       125 ~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~  204 (258)
                      .|.|+|+++|++||++ |||++.....    .+  ..+..+    ...+.+.......   ......++.+.++|+++.+
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~--~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA----GW--MILQRG----DLMLEFFAHPGLD---PLASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS----SE--EEEEET----TEEEEEEECTTCC---GGGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC----ce--eeeecc----eeccccccccccc---cCCCCcEEEEEECCHHHHH
Confidence            4999999999999987 9999877542    12  222221    2233333332221   1224557999999999999


Q ss_pred             HHHHHHHHHhCCeeecC-------CccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          205 EVVNLVTQELGGKITRQ-------PGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       205 ~~l~~~~~~~G~~i~~~-------p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +.+    +++|+++...       |...++ +.+.+||+|||||+|||+|.+
T Consensus        73 ~~~----~~~~~~~~~~~~~~~~~~~~~~~-G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECC
T ss_pred             HHH----hhhhhhhccccccccccceecCC-CcEEEEEECCCCCEEEEEEcc
Confidence            988    7777776543       443443 458899999999999999863

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.57  E-value=1.8e-14  Score=105.68  Aligned_cols=97  Identities=9%  Similarity=0.113  Sum_probs=66.4

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCC-CeEEEEeccCCCCceeEEEEEeecCCCcccC-CCCeeeEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE-KYSNAFLGFGPEQSYFVVELTYNYGVTSYDI-GTGFGHLA   97 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~~~hia   97 (258)
                      .+.+++||+|.|+|+++|++||+++|||++..+....+. .....+.+.........+.+.......+... ..++.|+|
T Consensus         3 ~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hia   82 (144)
T d1zswa1           3 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG   82 (144)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEE
Confidence            378999999999999999999999999999877543332 2222333322222333444443322222222 23689999


Q ss_pred             EEcCC---------------------------------CCCCcEEEEEECCC
Q 025083           98 IATED---------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus        98 ~~v~d---------------------------------DP~G~~iel~~~~~  116 (258)
                      |.|++                                 ||||+.|||++..+
T Consensus        83 f~v~~~~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          83 LLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECTT
T ss_pred             EecCCchhHHHHhhhhhccceeeeCccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            99987                                 99999999998764

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.54  E-value=5.2e-14  Score=100.06  Aligned_cols=106  Identities=12%  Similarity=0.012  Sum_probs=72.7

Q ss_pred             eEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHHHH
Q 025083          125 MLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYKSA  204 (258)
Q Consensus       125 ~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~~~  204 (258)
                      .|.|+|+++|++||+++|||++.....    .  .+++..+    ...+.+......    ......++.+.+.|++++.
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~--~~~~~~~----~~~l~l~~~~~~----~~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----D--FAGVRRG----DIRLHISRTEHQ----IVADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----S--EEEEEET----TEEEEEEECSCH----HHHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----c--eeEeeee----eeeeeeeccccc----cccceeEEEEeechhHHHH
Confidence            599999999999999999999876532    1  2334432    234545433221    1124567999999999998


Q ss_pred             HHHHHHHHHhCCeeecCCccC------CCCCeeEEEEECCCCCEEEEEcc
Q 025083          205 EVVNLVTQELGGKITRQPGPI------PGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       205 ~~l~~~~~~~G~~i~~~p~~~------~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +++    ++++......+...      ...+++.+||+|||||+|||...
T Consensus        76 ~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEW----ARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHH----HTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHH----HhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            888    77776654333211      11235899999999999999763

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.52  E-value=4.3e-14  Score=102.59  Aligned_cols=116  Identities=12%  Similarity=0.097  Sum_probs=76.0

Q ss_pred             eeeEEecChhhHHHHHHHhcCCeEeeeecCCc-------cceeEEEeeecCCCceeEEEEEEec-CC--cccccCCceee
Q 025083          123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-------LKCALAMLGYAEEDQTTVLELAYSY-GV--TEYTKGNAYAQ  192 (258)
Q Consensus       123 hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~l~~~~-~~--~~~~~~~g~~h  192 (258)
                      .+.+.|.|+++|++||+++||+++..+...++       +....+.+..++    ..+.+.... ..  .+........+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~   85 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG----SSFVVCDVSSLPGFSTAKSEGSGVT   85 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT----EEEEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECC----eeeeccccccccccccCCCCCcceE
Confidence            45667779999999999999999876543222       112223344332    222222211 11  11122223458


Q ss_pred             EEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          193 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       193 i~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      |++.|+|+++.+.++    .++|+++..+|...++ +.++++|+||+|+.|+|.|
T Consensus        86 l~~~v~d~~~~~~~~----~~~g~~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          86 FLLGTKDAEAAVAKA----VDAGAVKVEVTEAEVE-LGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEEECSCHHHHHHHH----HHTTCEECCCCHHHHH-TTEEEEEECTTSCEEEEEC
T ss_pred             EEEeecCcceeEEEe----ecccceEecCcccccc-cCEEEEEECCCCCEEEEeC
Confidence            999999999999888    8999999999877665 3588999999999999975

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.50  E-value=7.2e-14  Score=105.51  Aligned_cols=89  Identities=22%  Similarity=0.239  Sum_probs=61.7

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      +.+++||+|.|+|++++++||+++|||+++.+.+    .+..+++..+. ... .+.+.............++.||||.|
T Consensus        10 I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~l~HiAf~V   83 (170)
T d1zswa2          10 IQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGE-AFG-EIVVKYLDGPTEKPGRGSIHHLAIRV   83 (170)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTC-STT-CEEEEECCSSBCBCCBTCEEEEEEEE
T ss_pred             hCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceEEEEeccCc-cce-EEEeccccccccccCccccceEEEEe
Confidence            7899999999999999999999999999987632    23333333222 222 22232222222222234789999999


Q ss_pred             CC---------------------------------CCCCcEEEEEECC
Q 025083          101 ED---------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus       101 ~d---------------------------------DP~G~~iel~~~~  115 (258)
                      +|                                 |||||.||++...
T Consensus        84 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          84 KNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             CChHHHHHHHHHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEECC
Confidence            87                                 9999999999753

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.50  E-value=1.8e-13  Score=100.02  Aligned_cols=99  Identities=23%  Similarity=0.293  Sum_probs=70.1

Q ss_pred             cccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEecc--CCCCceeEEEEEeecCCCc--------
Q 025083           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGF--GPEQSYFVVELTYNYGVTS--------   86 (258)
Q Consensus        17 ~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~l~~~~~~~~--------   86 (258)
                      +.+|+++|+||+|.|+|+++|++||+++||++.......+......++...  ........+++........        
T Consensus         1 ~~~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~   80 (145)
T d1jc4a_           1 NEDLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAK   80 (145)
T ss_dssp             CCCCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHH
T ss_pred             CcccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccc
Confidence            357899999999999999999999999999998766554443333333221  1122344677766443221        


Q ss_pred             ccCCCCeeeEEEEcCC-----------------------------------CCCCcEEEEEECC
Q 025083           87 YDIGTGFGHLAIATED-----------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        87 ~~~~~~~~hia~~v~d-----------------------------------DP~G~~iel~~~~  115 (258)
                      .....|+.|+||.|+|                                   ||+|+.|||++.+
T Consensus        81 ~~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          81 HNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TTTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             cCCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            1234589999999998                                   7899999999864

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.49  E-value=1.6e-13  Score=97.03  Aligned_cols=109  Identities=15%  Similarity=0.090  Sum_probs=70.9

Q ss_pred             eeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEECChHH
Q 025083          123 QVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAISTDDVYK  202 (258)
Q Consensus       123 hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v~d~~~  202 (258)
                      ...|.|+|+++|++||+++|||++..+...    +  ..+..+    ...+.+......    ...+..++.+.+.+++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~~----~--~~~~~~----~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVEDD----F--AGVVRD----DVTLFISAVQDQ----VVPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECSS----E--EEEEET----TEEEEEEECSCT----TTGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECCC----e--eEEecc----cceeeccccccc----cCCCCceEEEeeccHHH
Confidence            456999999999999999999998876531    2  233322    233434332221    22355678899999988


Q ss_pred             HHHHHHHH----HHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEc
Q 025083          203 SAEVVNLV----TQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  247 (258)
Q Consensus       203 ~~~~l~~~----~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  247 (258)
                      ..+.+.+.    +...|..+..+|...++  ++.+||+|||||+|||+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCC--EEEEEEECCCCCEEEEEE
Confidence            87777211    12233334444444443  478999999999999985

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.45  E-value=2.8e-13  Score=98.42  Aligned_cols=92  Identities=21%  Similarity=0.360  Sum_probs=68.1

Q ss_pred             cceeeEEEEEe----CCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeE
Q 025083           21 KRRFLHAVYRV----GDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHL   96 (258)
Q Consensus        21 ~~~~~hv~l~v----~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi   96 (258)
                      +.++.|+.|+|    +|+++|++||+++|||++..+...+. .+..+++..+.  ....+.+....+......+.+..|+
T Consensus         3 ~~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~hl   79 (137)
T d1twua_           3 FSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLL   79 (137)
T ss_dssp             CSSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEE
T ss_pred             cCCCceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCC--CceeeecccccccccccccccCceE
Confidence            55677777776    69999999999999999987655433 35667776543  3456666665544444445567899


Q ss_pred             EEEcCC----------------------------------CCCCcEEEEEECC
Q 025083           97 AIATED----------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        97 a~~v~d----------------------------------DP~G~~iel~~~~  115 (258)
                      +|.|++                                  ||||+.|||....
T Consensus        80 af~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~  132 (137)
T d1twua_          80 VFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  132 (137)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCC
Confidence            999987                                  9999999999754

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.45  E-value=6.9e-13  Score=95.61  Aligned_cols=94  Identities=63%  Similarity=1.098  Sum_probs=60.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~  101 (258)
                      .|++||+|.|+|+++|++||+++|||++..+...+......................................++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            58999999999999999999999999998776544443333333322211111111112222222223345567777776


Q ss_pred             C----------------------------CCCCcEEEEEECC
Q 025083          102 D----------------------------DPDGYIFELIQRG  115 (258)
Q Consensus       102 d----------------------------DP~G~~iel~~~~  115 (258)
                      +                            |||||.|||++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEHH
T ss_pred             hHHHHHHHHHHcCCceeeCCCCcEEEEEECCCCCEEEEEECC
Confidence            6                            9999999999853

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.44  E-value=2.9e-13  Score=94.76  Aligned_cols=79  Identities=19%  Similarity=0.270  Sum_probs=57.8

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~  101 (258)
                      |+|+||.|.|+|++++++||+++|||++..+..   +  ..+++..+   ....+.+......    ..++..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~---~~~~~~~~~~~~~----~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDN---DGFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECT---TCCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---C--cceeeeec---ceeeeeeeeeecc----cccccceeeeeec
Confidence            789999999999999999999999999987643   2  23344322   2334555433221    1246789999998


Q ss_pred             C--------------------------------CCCCcEEEEE
Q 025083          102 D--------------------------------DPDGYIFELI  112 (258)
Q Consensus       102 d--------------------------------DP~G~~iel~  112 (258)
                      +                                ||||+.|||.
T Consensus        70 ~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             cccchhhhhhhHHHcCCccccCCCCceEEEEEECCCCCEEEEE
Confidence            7                                9999999986

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.44  E-value=9.2e-13  Score=98.48  Aligned_cols=87  Identities=22%  Similarity=0.261  Sum_probs=62.6

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      .+|++||+|.|+|+++|++||+++|||++..+...+.......+...+... . ...+...      ....++.|++|.+
T Consensus         3 ~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~------~~~~~~~h~~~~~   74 (162)
T d1mpya2           3 AVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKA-H-DVAFIHH------PEKGRLHHVSFHL   74 (162)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBS-C-SEEEEEC------SSSSEEEEEEEEC
T ss_pred             cccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccc-c-ccccccc------CCCCccceeEEEE
Confidence            578999999999999999999999999998776555554444454433211 1 1111111      1234678999998


Q ss_pred             CC------------------------------------CCCCcEEEEEECC
Q 025083          101 ED------------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus       101 ~d------------------------------------DP~G~~iel~~~~  115 (258)
                      .+                                    |||||.|||+...
T Consensus        75 ~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~  125 (162)
T d1mpya2          75 ETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  125 (162)
T ss_dssp             SCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             eeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECC
Confidence            86                                    9999999999875

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.44  E-value=6.6e-13  Score=95.84  Aligned_cols=80  Identities=14%  Similarity=0.137  Sum_probs=60.8

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      |.+|+||+|.|+|++++++||+++|||++..+..      ..+|+..+.  ....+.+...       ...++.|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~--~~~~l~~~~~-------~~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQ--RAWRIAVQPG-------ELDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSS--BSCSEEEEEC-------TTCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeee--cceeeeeecc-------CCCCceEEEEEe
Confidence            6899999999999999999999999999876532      234555443  2333444321       235789999999


Q ss_pred             CC--------------------------------------CCCCcEEEEEECC
Q 025083          101 ED--------------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus       101 ~d--------------------------------------DP~G~~iel~~~~  115 (258)
                      ++                                      ||+||.||++..+
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence            87                                      9999999999765

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.43  E-value=5.9e-13  Score=95.98  Aligned_cols=80  Identities=14%  Similarity=0.180  Sum_probs=60.8

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      |.++.||+|.|+||+++++||+++|||++..+..      ..+++..+.  ....+.+...       ...++.|++|.|
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~-------~~~~~~h~~f~v   66 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDS--RAWRIAVQQG-------EVDDLAFAGYEV   66 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSS--BSCSEEEEEC-------TTCEEEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecC--CceEEEEecC-------CCCCceEEEEEE
Confidence            6789999999999999999999999999887632      234555443  2333444321       134788999999


Q ss_pred             CC--------------------------------------CCCCcEEEEEECC
Q 025083          101 ED--------------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus       101 ~d--------------------------------------DP~G~~iel~~~~  115 (258)
                      ++                                      ||+||.||++..+
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence            86                                      9999999999764

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.43  E-value=7.3e-13  Score=97.22  Aligned_cols=92  Identities=18%  Similarity=0.237  Sum_probs=63.8

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccC-----------CCCeEEEEeccCCCCceeEEEEEee---cCCC
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-----------EEKYSNAFLGFGPEQSYFVVELTYN---YGVT   85 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~---~~~~   85 (258)
                      .+++++||+|.|+|+++|++||++ |||++..+....           ......+++....  ....++|...   ....
T Consensus         6 ~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~l~~~~~~~~~~   82 (149)
T d1ss4a_           6 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD--GHSRIELSRFLTPPTIA   82 (149)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT--SSCEEEEEEEEESCCCC
T ss_pred             CCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecc--cceEEEEEeeccccCcc
Confidence            378999999999999999999998 999988764321           1233455555433  2334444331   1111


Q ss_pred             c----ccCCCCeeeEEEEcCC--------------------------------CCCCcEEEEEEC
Q 025083           86 S----YDIGTGFGHLAIATED--------------------------------DPDGYIFELIQR  114 (258)
Q Consensus        86 ~----~~~~~~~~hia~~v~d--------------------------------DP~G~~iel~~~  114 (258)
                      .    .....|+.|++|.|+|                                ||||+.|||+++
T Consensus        83 ~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          83 DHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             BCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred             cccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEc
Confidence            1    1123578999999999                                999999999985

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.2e-12  Score=98.95  Aligned_cols=96  Identities=30%  Similarity=0.559  Sum_probs=66.7

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCC-----------------ceeEEEEEeecC
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQ-----------------SYFVVELTYNYG   83 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~l~~~~~   83 (258)
                      ..+++||+|+|+|+++|++||+++|||+++.....+...+..++...+...                 ....+.+.....
T Consensus        21 ~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (176)
T d1qipa_          21 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTE  100 (176)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGG
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeeccc
Confidence            457999999999999999999999999998777666666666665532211                 111111111110


Q ss_pred             ---CCc----ccCCCCeeeEEEEcCC-------------------------------CCCCcEEEEEECCC
Q 025083           84 ---VTS----YDIGTGFGHLAIATED-------------------------------DPDGYIFELIQRGP  116 (258)
Q Consensus        84 ---~~~----~~~~~~~~hia~~v~d-------------------------------DP~G~~iel~~~~~  116 (258)
                         ...    .....++.|+|+.+++                               ||||+.|||++++.
T Consensus       101 ~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         101 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             GCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTTT
T ss_pred             cccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCCC
Confidence               011    1123588999999988                               99999999999864

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.40  E-value=1.8e-12  Score=93.04  Aligned_cols=88  Identities=20%  Similarity=0.286  Sum_probs=61.3

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCC-CCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-EKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~   98 (258)
                      |+.+|+||+|.|+|++++++||+++|||++....+... ......++..+.    ..+.+.....    ....+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGEK----LAERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETT----EEEEEEECCC----CSSCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCC----EEEeeccccc----ccccceeeeee
Confidence            67899999999999999999999999999987654332 122334443322    2334433211    12346689999


Q ss_pred             EcCC----------------------------------CCCCcEEEEEECC
Q 025083           99 ATED----------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        99 ~v~d----------------------------------DP~G~~iel~~~~  115 (258)
                      .|+.                                  |||||.|||....
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence            8864                                  9999999998643

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.37  E-value=2.5e-12  Score=97.40  Aligned_cols=85  Identities=24%  Similarity=0.258  Sum_probs=63.5

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      ++||+||+|.|+|++++++|| ++|||++..+...+.+....+++....  ....+.+...       ...++.|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~--~~~~l~~~~~-------~~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQ--TVHDTALTGG-------NGPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSS--SSCSEEEEES-------SBSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCc--cccceecccc-------cCCCccceeEEe
Confidence            689999999999999999999 689999987665555555566666432  2233333321       134778999988


Q ss_pred             CC--------------------------------------CCCCcEEEEEECC
Q 025083          101 ED--------------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus       101 ~d--------------------------------------DP~G~~iel~~~~  115 (258)
                      .+                                      ||||+.||++...
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~  125 (176)
T d1f1ua2          73 HEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  125 (176)
T ss_dssp             SSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             ccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCC
Confidence            76                                      9999999999865

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.37  E-value=1.5e-12  Score=91.53  Aligned_cols=82  Identities=16%  Similarity=0.195  Sum_probs=57.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEcC
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIATE  101 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v~  101 (258)
                      |+++|+.|.|+|+++|++||+++||+++....+    .+  +.+..++    ..+.+......+....+.+ .+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~--~~~~~g~----~~l~l~~~~~~~~~~~~~~-~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIGS----HCLMLSQNHLVPLENFQSG-IIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEETT----EEEEEESSCSSSCCCCCSC-EEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----Ce--EEEEEcC----ceeeeeecccCCCCCCCcc-eEEEEEEC
Confidence            689999999999999999999999999865432    23  3444432    2344443322222222333 47999998


Q ss_pred             C--------------------------------CCCCcEEEEEEC
Q 025083          102 D--------------------------------DPDGYIFELIQR  114 (258)
Q Consensus       102 d--------------------------------DP~G~~iel~~~  114 (258)
                      |                                |||||.||+++.
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEe
Confidence            8                                999999999875

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.36  E-value=2.8e-12  Score=93.28  Aligned_cols=87  Identities=21%  Similarity=0.369  Sum_probs=59.0

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~   99 (258)
                      |+.+++||+|.|+|++++++||+++||+++.....    .  ..++..++  ....+.+...... ......+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~----~--~~~~~~~~--~~~~l~~~~~~~~-~~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN----T--GAYLTCGD--LWVCLSYDEARQY-VPPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET----T--EEEEEETT--EEEEEEECTTCCC-CCGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec----c--cccccccc--ccceeeccccccc-CCCcCCccceeeee
Confidence            68899999999999999999999999999976542    1  22333322  2223333222111 11223466899998


Q ss_pred             cCC-------------------------------CCCCcEEEEEECC
Q 025083          100 TED-------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus       100 v~d-------------------------------DP~G~~iel~~~~  115 (258)
                      ++.                               |||||.|||....
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEECC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCCCCceEEEEECCCCCEEEEEECC
Confidence            854                               9999999987653

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.35  E-value=3.2e-12  Score=94.03  Aligned_cols=116  Identities=14%  Similarity=0.109  Sum_probs=84.6

Q ss_pred             CCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEecCCcc------cccCCcee
Q 025083          118 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYGVTE------YTKGNAYA  191 (258)
Q Consensus       118 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~g~~  191 (258)
                      ..+|+||.+.|+|++++.+||++ |||+...+....    .+..++.+    ...+  ..+.....      ...+.|+.
T Consensus         7 ~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~~G----~i~l--l~~~~~~s~~~~~~~~hg~gv~   75 (150)
T d1cjxa1           7 LMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYRQG----EINL--ILNNEPNSIASYFAAEHGPSVC   75 (150)
T ss_dssp             EEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEEET----TEEE--EEECCSSSHHHHHHHHHSSEEE
T ss_pred             cCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEecC----cEEE--EecCCCCCHhHhHHhhCCCceE
Confidence            45799999999999999999976 999988765432    23334422    2223  22322211      23567999


Q ss_pred             eEEEEECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcchh
Q 025083          192 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  250 (258)
Q Consensus       192 hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  250 (258)
                      ||+|.|+|++++++++    +++|+++..+|..  .+......+++|+|.++.|+++.+
T Consensus        76 hiaf~V~D~~~a~~~a----~~~Ga~~i~~~~~--~g~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          76 GMAFRVKDSQKAYNRA----LELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             EEEEEESCHHHHHHHH----HHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCS
T ss_pred             EEEEEeCCHHHHHHHH----HHCCCEEcccCCC--CCceeeeEEEcCCCCEEEEECcCC
Confidence            9999999999999999    8999998766532  223356779999999999998754

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.34  E-value=2.8e-12  Score=94.11  Aligned_cols=84  Identities=17%  Similarity=0.247  Sum_probs=59.0

Q ss_pred             cccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEE
Q 025083           19 KDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (258)
Q Consensus        19 ~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~   98 (258)
                      ..+++++||.|.|+|++++++||+++|||++.....    . ...+...+ ....+.+.+...       ...++.|++|
T Consensus        12 ~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~-~~~~~~~~-~~~~~~~~~~~~-------~~~~~~h~~~   78 (146)
T d1f1ua1          12 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----N-TIYLRSLE-EFIHHNLVLRQG-------PIAAVAAFAY   78 (146)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS----S-EEEEECTT-CCSSCSEEEEEC-------SSCEEEEEEE
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC----C-ceeeeccc-ccccceeecccc-------CCCCCceeeE
Confidence            348999999999999999999999999999987532    1 22333322 222222223221       1247788999


Q ss_pred             EcCC------------------------------------CCCCcEEEEEECC
Q 025083           99 ATED------------------------------------DPDGYIFELIQRG  115 (258)
Q Consensus        99 ~v~d------------------------------------DP~G~~iel~~~~  115 (258)
                      .+.+                                    ||+|+.||++...
T Consensus        79 ~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  131 (146)
T d1f1ua1          79 RVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  131 (146)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             eeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEec
Confidence            8875                                    9999999999753

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.32  E-value=4.1e-12  Score=92.87  Aligned_cols=37  Identities=24%  Similarity=0.334  Sum_probs=33.5

Q ss_pred             cccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeee
Q 025083           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKR   53 (258)
Q Consensus        17 ~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~   53 (258)
                      |.|-+|||+||.|.|+|++++++||+++|||++..+.
T Consensus         1 m~~~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~   37 (145)
T d1mpya1           1 MNKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRD   37 (145)
T ss_dssp             CTTSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCcCCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEee
Confidence            4566899999999999999999999999999988663

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.32  E-value=6.6e-12  Score=90.52  Aligned_cols=83  Identities=24%  Similarity=0.350  Sum_probs=56.6

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEE
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIA   99 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~   99 (258)
                      |+.+|+||+|.|+|++++++||+++||+++..+.+.     . .++..+.    ..+........  .....+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~-----~-~~~~~~~----~~~~~~~~~~~--~~~~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ-----G-AYLELGS----LWLCLSREPQY--GGPAADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT-----E-EEEEETT----EEEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc-----e-eeeecCC----eEEEEeeeccc--cccccccccchhc
Confidence            678999999999999999999999999998876431     1 2233222    22333222211  1123455778877


Q ss_pred             cCC-------------------------------CCCCcEEEEEEC
Q 025083          100 TED-------------------------------DPDGYIFELIQR  114 (258)
Q Consensus       100 v~d-------------------------------DP~G~~iel~~~  114 (258)
                      ++.                               |||||.|||+..
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCCCcceeEEEEECCCCCEEEEEEC
Confidence            753                               999999999764

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.28  E-value=1e-11  Score=92.69  Aligned_cols=79  Identities=23%  Similarity=0.301  Sum_probs=56.4

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCC--CeEEEEeccCCCCceeEEEEEeecCCCc----------c
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEE--KYSNAFLGFGPEQSYFVVELTYNYGVTS----------Y   87 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~   87 (258)
                      ++.+++||+|+|+|+++|++||+++|||+++.....+..  ....+.+..    ....++|..+.....          .
T Consensus         4 ~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~----~~~~i~l~~~~~~~~~~~~~~~~~~~   79 (163)
T d1t47a1           4 PVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTN----GSARFVLTSVIKPATPWGHFLADHVA   79 (163)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEE----TTEEEEEEEESSCCSHHHHHHHHHHH
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEec----CCEEEEEeccCCCCCccccccchhhh
Confidence            478999999999999999999999999999876543322  223344443    234566766543211          1


Q ss_pred             cCCCCeeeEEEEcCC
Q 025083           88 DIGTGFGHLAIATED  102 (258)
Q Consensus        88 ~~~~~~~hia~~v~d  102 (258)
                      ..+.|+.||||.|+|
T Consensus        80 ~~g~G~~hiaf~VdD   94 (163)
T d1t47a1          80 EHGDGVVDLAIEVPD   94 (163)
T ss_dssp             HHCSEEEEEEEECSC
T ss_pred             cCCCceEEEEEeeCC
Confidence            235789999999998

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=5.4e-12  Score=92.79  Aligned_cols=80  Identities=18%  Similarity=0.224  Sum_probs=54.1

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc-------ccCCCCe
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS-------YDIGTGF   93 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-------~~~~~~~   93 (258)
                      +++++||+|.|+|+++|++||+++|||+++.....+.+.....++....  ....++|........       ...+.|+
T Consensus         9 ~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1           9 FLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQ--GKIVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEE--TTEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             eeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecC--CcEEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            6789999999999999999999999999987655443322222222211  223455554332211       1236799


Q ss_pred             eeEEEEcCC
Q 025083           94 GHLAIATED  102 (258)
Q Consensus        94 ~hia~~v~d  102 (258)
                      .||||.|+|
T Consensus        87 ~hiaf~V~d   95 (149)
T d1sqia1          87 KDIAFEVED   95 (149)
T ss_dssp             EEEEEEEEC
T ss_pred             EEEEEEecc
Confidence            999999998

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.21  E-value=4e-11  Score=92.35  Aligned_cols=98  Identities=17%  Similarity=0.216  Sum_probs=67.7

Q ss_pred             CCceeeeEEec--ChhhHHHHHHHhcCCeEeeeecCCc--cceeEEEeeecCCCceeEEEEEEecCCc--c------ccc
Q 025083          119 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDSPE--LKCALAMLGYAEEDQTTVLELAYSYGVT--E------YTK  186 (258)
Q Consensus       119 ~~i~hv~l~v~--d~~~s~~FY~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~------~~~  186 (258)
                      .+|+||++.|+  |+++++.||+++|||+.....+.++  .......+..+.  ....+.+.......  .      ...
T Consensus         4 ~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~--~~~~~~l~~~~~~~~sqi~~fl~~~~   81 (203)
T d1cjxa2           4 KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD--GMIRIPLNEESSKGAGQIEEFLMQFN   81 (203)
T ss_dssp             EEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT--SSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccc--cccceecccCCCCCccHHHHHHHhcC
Confidence            46899999998  9999999999999999887654322  222222233222  23333333322211  1      124


Q ss_pred             CCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCC
Q 025083          187 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  222 (258)
Q Consensus       187 ~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p  222 (258)
                      +.|++||||.|+|+.+++++|    +++|+++...|
T Consensus        82 g~GiqHIAf~vdDI~aav~~L----~~~Gv~fL~~p  113 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAP  113 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHH----HHTTCCBCCCC
T ss_pred             CCCCceEEEEeCCHHHHHHHH----HhcCCccccCc
Confidence            679999999999999999999    89999987654

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.16  E-value=5.2e-11  Score=88.17  Aligned_cols=73  Identities=22%  Similarity=0.292  Sum_probs=48.1

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccC---CCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEE
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP---EEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAI   98 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~   98 (258)
                      .+++||+|.|+|++++++||+++|||++......+   .......++..+.  ....+.+...      +...++.|+||
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~a~~~~------~~~~gl~Hiaf   80 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG--RHHTIALAAF------PIPKRIHHFML   80 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCSEEEECC------SCSSSEEEEEE
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeecc--ccceeeeccC------CCCCceeEEEE
Confidence            68999999999999999999999999986543211   1122334444332  2222222211      12358999999


Q ss_pred             EcCC
Q 025083           99 ATED  102 (258)
Q Consensus        99 ~v~d  102 (258)
                      .|++
T Consensus        81 ~v~~   84 (156)
T d1kw3b2          81 QANT   84 (156)
T ss_dssp             EBSS
T ss_pred             ECCC
Confidence            9987

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.16  E-value=5.7e-10  Score=80.52  Aligned_cols=113  Identities=18%  Similarity=0.132  Sum_probs=70.3

Q ss_pred             cChhhHHHHHHHhcCCeEeeeecCCcc------------ceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          129 GDLGRSIKFYEKALGMKLLRTIDSPEL------------KCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       129 ~d~~~s~~FY~~~lG~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      .|.+++++||+++||+++.......+.            ....+.+..++    ..+.+.......+ ....+-.++++.
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g----~~~~~~d~~~~~~-~~~~~~~~~~l~   86 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGS----FALMASDNHPAYP-YEGIKGCSISLN   86 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETT----EEEEEEECCTTSC-CCCCCSEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcC----eEEEecccCCccc-ccCCCcEEEEEE
Confidence            399999999999999998765432221            11112222221    1222222111111 122344568899


Q ss_pred             ECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcch
Q 025083          197 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  249 (258)
Q Consensus       197 v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  249 (258)
                      +++.+. .+++.+. .++|+++..+|...++ +.++++|+||+|+.|.|....
T Consensus        87 ~~~~d~-~~~~~~~-l~~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          87 VDSKAE-AERLFNA-LAEGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             CSSHHH-HHHHHHH-HHTTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESC
T ss_pred             cCCHHH-HHHHHhh-cccCceeecCccccCC-CcEEEEEECCCCCEEEEEecC
Confidence            888543 3444333 5689999999988776 458899999999999997543

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.15  E-value=1.5e-10  Score=90.23  Aligned_cols=102  Identities=15%  Similarity=0.205  Sum_probs=66.7

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecC-----CccceeEEEeeecCCCceeEEEEEEecCC----cc------
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDS-----PELKCALAMLGYAEEDQTTVLELAYSYGV----TE------  183 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~l~~~~~~----~~------  183 (258)
                      .+|+||++.|+|+++++.||+++|||+.......     +........+..+..  ...+.+.....+    .+      
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g--~v~~~l~E~~~~~~~~s~i~~FL~   85 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLNEPVHGTKRRSQIQTFLD   85 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEEEECCCSSSCCHHHHHHH
T ss_pred             CeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCC--ccceeeeeecCCCCCccHHHHHHH
Confidence            5799999999999999999999999998765422     122233333333322  334444432211    11      


Q ss_pred             cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCC
Q 025083          184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  222 (258)
Q Consensus       184 ~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p  222 (258)
                      ...+.|++||||.|+|+.+.+++|+++-.++|+++...|
T Consensus        86 ~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          86 HHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             HHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence            123569999999999999999999543334566666554

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.10  E-value=1.8e-10  Score=86.62  Aligned_cols=37  Identities=16%  Similarity=0.232  Sum_probs=32.9

Q ss_pred             ccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccC
Q 025083           20 DKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP   56 (258)
Q Consensus        20 ~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~   56 (258)
                      .+++++||+|.|+|++++++||+++|||+++.+....
T Consensus        10 ~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~   46 (172)
T d1sp8a1          10 HTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLS   46 (172)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGG
T ss_pred             CcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEeccc
Confidence            4789999999999999999999999999998765443

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.10  E-value=4.3e-10  Score=83.91  Aligned_cols=149  Identities=14%  Similarity=0.080  Sum_probs=78.3

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCcccCCCCeeeEEEEc
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTSYDIGTGFGHLAIAT  100 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hia~~v  100 (258)
                      +.+++||+|+|+|++++++||+++|||+++.+...+.+.........+.  ....+.+..+...... ............
T Consensus        10 i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~-~~~~~~~~~~~~   86 (167)
T d1sqda1          10 VKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTS--GDLRFLFTAPYSPSLS-AGEIKPTTTASI   86 (167)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEE--TTEEEEEEEECCGGGT-TTCCGGGCCCSS
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeC--CCeeEEEecccccccc-cccccccccccc
Confidence            6799999999999999999999999999987755443322222222211  1222333222211100 000000000000


Q ss_pred             CCCCCCcEEEEEECCCCCCCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCccceeEEEeeecCCCceeEEEEEEe
Q 025083          101 EDDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYS  178 (258)
Q Consensus       101 ~dDP~G~~iel~~~~~~~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  178 (258)
                      +.++++..-...+  ....++.|++|.|.|++++.+-.++ .|.+.......-.+++.++++..-+   ...+.|...
T Consensus        87 ~~~~~~~~~~~~~--~~~~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~g---d~~~~~v~r  158 (167)
T d1sqda1          87 PSFDHGSCRSFFS--SHGLGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYG---DVVLRYVSY  158 (167)
T ss_dssp             TTCCHHHHHHHHH--HHCSEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEET---TEEEEEEEE
T ss_pred             ccCCcchHHHhhh--ccCCCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccC---CcEEEEEec
Confidence            0000000000000  0124799999999999999999976 8998776532222345555544322   355555543

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.02  E-value=9.2e-10  Score=84.02  Aligned_cols=99  Identities=11%  Similarity=0.208  Sum_probs=68.2

Q ss_pred             CCCceeeeEEec--ChhhHHHHHHHhcCCeEeeeecC-----CccceeEEEeeecCCCceeEEEEEEecCCc---c----
Q 025083          118 PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTIDS-----PELKCALAMLGYAEEDQTTVLELAYSYGVT---E----  183 (258)
Q Consensus       118 ~~~i~hv~l~v~--d~~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~----  183 (258)
                      -..|+||++.|+  ++++++.||+++|||+.......     +.......-+..+.  ....+.+.......   .    
T Consensus         4 f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~--~~v~l~lne~~~~~~~s~i~~F   81 (199)
T d1t47a2           4 FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT--LKVKFPINEPALAKKKSQIDEY   81 (199)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT--SCSEEEEEEECCSSSCCHHHHH
T ss_pred             ceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccc--cccceeecccCccccccchhhh
Confidence            467999999998  99999999999999987764322     11222222233222  23344443322111   1    


Q ss_pred             --cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCC
Q 025083          184 --YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  222 (258)
Q Consensus       184 --~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p  222 (258)
                        ...|.|++||||.|+|+.+++++|    +++|+++...|
T Consensus        82 L~~~~g~GiQHIAl~tdDI~~av~~L----~~~G~~fL~~p  118 (199)
T d1t47a2          82 LEFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTP  118 (199)
T ss_dssp             HHHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCC
T ss_pred             hhhcCCCcceEEEEEcCCHHHHHHHH----HHcCCCCCCCC
Confidence              134569999999999999999999    89999998776

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=9e-10  Score=84.78  Aligned_cols=98  Identities=16%  Similarity=0.249  Sum_probs=66.4

Q ss_pred             CCceeeeEEecC--hhhHHHHHHHhcCCeEeeeecCC-----ccceeEEEeeecCCCceeEEEEEEecCCc---c-----
Q 025083          119 EPLCQVMLRVGD--LGRSIKFYEKALGMKLLRTIDSP-----ELKCALAMLGYAEEDQTTVLELAYSYGVT---E-----  183 (258)
Q Consensus       119 ~~i~hv~l~v~d--~~~s~~FY~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~-----  183 (258)
                      .+|+||++.|++  +++++.||+++|||+.....+..     .+......+..+..  ...+.+.......   .     
T Consensus        23 ~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~--~i~~~lne~~~~~~~sqi~~fl  100 (210)
T d1sqia2          23 EIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEE--SIKMPINEPAPGRKKSQIQEYV  100 (210)
T ss_dssp             EEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTS--CCEEEEEECC-----CHHHHHH
T ss_pred             ceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCc--cccccccccCCCCcccHHHHHH
Confidence            469999999997  99999999999999876543211     12223333333332  3444444322111   1     


Q ss_pred             -cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeeecCC
Q 025083          184 -YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  222 (258)
Q Consensus       184 -~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~~~p  222 (258)
                       ...|.|++||||.|+|+.+++++|    +++|+++...|
T Consensus       101 ~~~~G~GiQHIAf~t~DI~~av~~L----~~~Gv~fL~~P  136 (210)
T d1sqia2         101 DYNGGAGVQHIALRTEDIITTIRHL----RERGMEFLAVP  136 (210)
T ss_dssp             HHHTSSEEEEEEEEESCHHHHHHHH----HHHTCCBCCCC
T ss_pred             hhcCCCCeeEEEEEcCCHHHHHHHH----HHcCCCCCCCC
Confidence             134779999999999999999999    88999998776

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.02  E-value=8.2e-10  Score=78.49  Aligned_cols=31  Identities=19%  Similarity=0.445  Sum_probs=26.7

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRKR   53 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~   53 (258)
                      .||+|++|.|+|+++|++||++ ||+.+....
T Consensus         1 ~ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~   31 (128)
T d1klla_           1 ARISLFAVVVEDMAKSMEFYRK-MGVEIPAEA   31 (128)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH-TTCCCCTTG
T ss_pred             CeEeEEEEEcCCHHHHHHHHHH-hCCcccccc
Confidence            3789999999999999999976 899876543

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=98.93  E-value=2.3e-09  Score=75.27  Aligned_cols=31  Identities=23%  Similarity=0.393  Sum_probs=25.7

Q ss_pred             ceeeEE--EEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           22 RRFLHA--VYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        22 ~~~~hv--~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      +++..+  .|.|+|+++|++||+++|||++...
T Consensus         2 ~~~~~~~pvL~v~Dl~~s~~FY~~vLG~~~~~~   34 (122)
T d1jifa_           2 VKFLGAVPVLTAVDVPANVSFWVDTLGFEKDFG   34 (122)
T ss_dssp             CCEEEEEEEEEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             ccceeeEEEEEcCCHHHHHHHHHhhhCCceEec
Confidence            344444  4999999999999999999998765

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.92  E-value=4.9e-08  Score=69.78  Aligned_cols=115  Identities=14%  Similarity=0.076  Sum_probs=70.8

Q ss_pred             eeEEecChhhHHHHHHHhcCCeEeeeec-------CCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          124 VMLRVGDLGRSIKFYEKALGMKLLRTID-------SPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       124 v~l~v~d~~~s~~FY~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      +.+.-.|.+++++||+++||.+...+..       .+++....+.+..++    ..+.+.......+...+ +...+++.
T Consensus        10 L~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~----~~i~~~d~~~~~~~~~~-~~~s~~l~   84 (134)
T d1u7ia_          10 LMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD----QSVHCIDSHVRHAFDFT-PAFSFFVD   84 (134)
T ss_dssp             EEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT----EEEEEEEESSCCSCCCC-TTEEEEEE
T ss_pred             EEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECC----EEEEEecCCCCCCCCCC-CceEEEEE
Confidence            3444568999999999999987654321       112233334445432    23333332222122222 33458888


Q ss_pred             ECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEE
Q 025083          197 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  246 (258)
Q Consensus       197 v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  246 (258)
                      +++.+ ..+++.+. .++|.++..++.+.++ +.++..++||.|+.|.|.
T Consensus        85 ~~~~d-~~~~~~~~-l~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          85 CESNA-QIERLAEA-LSDGGKALMPLGDYGF-SQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             CCCHH-HHHHHHHH-HHTTSEEEEEEECCSS-SSEEEEEECTTSCEEEEE
T ss_pred             eccHH-HHHHHHHH-HhcCCEEecCcccccc-cceEEEEECCCCCEEEEE
Confidence            88844 44455444 3678999988877665 458899999999999985

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.91  E-value=3.6e-09  Score=72.86  Aligned_cols=30  Identities=23%  Similarity=0.369  Sum_probs=26.4

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      +++ +..|.|+|+++|++||+++|||++...
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~   31 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMD   31 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEE
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeec
Confidence            345 588999999999999999999998765

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.90  E-value=1e-08  Score=79.64  Aligned_cols=84  Identities=21%  Similarity=0.268  Sum_probs=54.4

Q ss_pred             cccccceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccC-----CCCeEEEEeccCCCCceeEEEEEeecCC---Cc--
Q 025083           17 PKKDKRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVP-----EEKYSNAFLGFGPEQSYFVVELTYNYGV---TS--   86 (258)
Q Consensus        17 ~~~~~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~--   86 (258)
                      ++..+.+++||++.|+|++++++||+++|||+........     ....+...+..  ......+++..+...   .+  
T Consensus         3 ~d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~--~~g~v~~~l~E~~~~~~~~s~i   80 (224)
T d1sp8a2           3 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLAN--NSENVLLPLNEPVHGTKRRSQI   80 (224)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEEC--SSSCCEEEEEEECCCSSSCCHH
T ss_pred             CCCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEc--CCCccceeeeeecCCCCCccHH
Confidence            3445789999999999999999999999999887654221     12223333332  223444555543221   11  


Q ss_pred             -----ccCCCCeeeEEEEcCC
Q 025083           87 -----YDIGTGFGHLAIATED  102 (258)
Q Consensus        87 -----~~~~~~~~hia~~v~d  102 (258)
                           ...+.|+.||||.|+|
T Consensus        81 ~~FL~~~~g~GiqHIAf~vdD  101 (224)
T d1sp8a2          81 QTFLDHHGGPGVQHMALASDD  101 (224)
T ss_dssp             HHHHHHHTSSEEEEEEEEETT
T ss_pred             HHHHHhccCCCceeEEEEeCC
Confidence                 1235799999999998

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.81  E-value=2.3e-08  Score=77.83  Aligned_cols=99  Identities=12%  Similarity=0.208  Sum_probs=64.1

Q ss_pred             CCceeeeEEecChhhHHHHHHHhcCCeEeeeecCCc-----cceeEEEeeecCCCceeEEEEEEecCC----cc------
Q 025083          119 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPE-----LKCALAMLGYAEEDQTTVLELAYSYGV----TE------  183 (258)
Q Consensus       119 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~~~~----~~------  183 (258)
                      .+|+||++.|+|++++.+||+++||+.........+     .......+..+.  ....+.+.....+    .+      
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~--g~v~~~l~E~~~~~~~~sqi~~FL~   98 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND--EMVLLPINEPVHGTKRKSQIQTYLE   98 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT--SCSEEEEEEECCC---CCHHHHHHH
T ss_pred             CccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCC--cccceeEEeecCCCCCcchHHHHHh
Confidence            569999999999999999999999998876543221     112222222222  2344444432111    11      


Q ss_pred             cccCCceeeEEEEECChHHHHHHHHHHHHHhCCeee
Q 025083          184 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  219 (258)
Q Consensus       184 ~~~~~g~~hi~~~v~d~~~~~~~l~~~~~~~G~~i~  219 (258)
                      ...|.|++||||.|+|+.+++++|+++-..+|+++.
T Consensus        99 ~~~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~  134 (230)
T d1sqda2          99 HNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFM  134 (230)
T ss_dssp             HHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBC
T ss_pred             hccCCceeEEEEEeCCHHHHHHHHHHhhcccCcccc
Confidence            134779999999999999999999543223566655

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=98.81  E-value=2.1e-08  Score=69.77  Aligned_cols=29  Identities=14%  Similarity=0.330  Sum_probs=25.4

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEeeee
Q 025083           25 LHAVYRVGDLDRTIKYYTECFGMELLRKR   53 (258)
Q Consensus        25 ~hv~l~v~dl~~s~~FY~~~lG~~~~~~~   53 (258)
                      .+..|.|+|+++|++||+++|||++..+.
T Consensus         6 ~~pvL~v~D~~~s~~FY~~~LG~~~~~~~   34 (120)
T d1xrka_           6 AVPVLTARDVAEAVEFWTDRLGFSRVFVE   34 (120)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             EEEEEEECCHHHHHHHHHHhhCCeEEEEC
Confidence            45569999999999999999999988763

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.77  E-value=1.8e-08  Score=73.46  Aligned_cols=76  Identities=12%  Similarity=0.097  Sum_probs=51.6

Q ss_pred             Ccccc-cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCCCCeEEEEeccCCCCceeEEEEEeecCCCc------cc
Q 025083           16 WPKKD-KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPEEKYSNAFLGFGPEQSYFVVELTYNYGVTS------YD   88 (258)
Q Consensus        16 ~~~~~-~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~   88 (258)
                      |-+++ +.+++||.+.|+|++++.+||++ |||+.+.+...  .  ....+.-+    .+.+.+  +.....      .+
T Consensus         1 ~~np~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~--~--~~~l~~~G----~i~ll~--~~~~~s~~~~~~~~   69 (150)
T d1cjxa1           1 YENPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRS--K--NVHLYRQG----EINLIL--NNEPNSIASYFAAE   69 (150)
T ss_dssp             CCCTTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESS--S--SEEEEEET----TEEEEE--ECCSSSHHHHHHHH
T ss_pred             CCCCCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccc--e--EEEEEecC----cEEEEe--cCCCCCHhHhHHhh
Confidence            33455 78999999999999999999986 99998876432  1  12223322    233333  322211      23


Q ss_pred             CCCCeeeEEEEcCC
Q 025083           89 IGTGFGHLAIATED  102 (258)
Q Consensus        89 ~~~~~~hia~~v~d  102 (258)
                      .+.|+.||||+|+|
T Consensus        70 hg~gv~hiaf~V~D   83 (150)
T d1cjxa1          70 HGPSVCGMAFRVKD   83 (150)
T ss_dssp             HSSEEEEEEEEESC
T ss_pred             CCCceEEEEEEeCC
Confidence            57899999999999

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.76  E-value=5.2e-08  Score=68.00  Aligned_cols=27  Identities=22%  Similarity=0.444  Sum_probs=23.3

Q ss_pred             eEEE--EEeCCHHHHHHHHHHhcCCEEeee
Q 025083           25 LHAV--YRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        25 ~hv~--l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      .|+.  |.|+|+++|++||++ |||++...
T Consensus         2 ~~~~p~l~v~Dl~~s~~FY~~-LGf~~~~~   30 (120)
T d1ecsa_           2 DQATPNLPSRDFDSTAAFYER-LGFGIVFR   30 (120)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEE
T ss_pred             CeEEEEEEeCCHHHHHHHHHH-cCCeeEEe
Confidence            3555  999999999999987 99998765

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.75  E-value=3.7e-08  Score=74.95  Aligned_cols=82  Identities=15%  Similarity=0.169  Sum_probs=52.4

Q ss_pred             cccceeeEEEEEeC--CHHHHHHHHHHhcCCEEeeeecc-----CCCCeEEEEeccCCCCceeEEEEEeecCC--Cc---
Q 025083           19 KDKRRFLHAVYRVG--DLDRTIKYYTECFGMELLRKRDV-----PEEKYSNAFLGFGPEQSYFVVELTYNYGV--TS---   86 (258)
Q Consensus        19 ~~~~~~~hv~l~v~--dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~---   86 (258)
                      ++..+|+||++.|+  ++++++.||+++|||+.......     +.......-+..  ......+.+..+...  ..   
T Consensus         2 ~~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s--~~~~v~l~lne~~~~~~~s~i~   79 (199)
T d1t47a2           2 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVAD--GTLKVKFPINEPALAKKKSQID   79 (199)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEEC--TTSCSEEEEEEECCSSSCCHHH
T ss_pred             CcceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccc--cccccceeecccCccccccchh
Confidence            45789999999999  99999999999999988754321     112222222221  223334444432221  11   


Q ss_pred             ----ccCCCCeeeEEEEcCC
Q 025083           87 ----YDIGTGFGHLAIATED  102 (258)
Q Consensus        87 ----~~~~~~~~hia~~v~d  102 (258)
                          ...|.|+.||||.|+|
T Consensus        80 ~FL~~~~g~GiQHIAl~tdD   99 (199)
T d1t47a2          80 EYLEFYGGAGVQHIALNTGD   99 (199)
T ss_dssp             HHHHHHTSCEEEEEEEECSC
T ss_pred             hhhhhcCCCcceEEEEEcCC
Confidence                1345799999999999

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.75  E-value=1.2e-08  Score=78.26  Aligned_cols=34  Identities=18%  Similarity=0.141  Sum_probs=30.4

Q ss_pred             cceeeEEEEEeC--CHHHHHHHHHHhcCCEEeeeec
Q 025083           21 KRRFLHAVYRVG--DLDRTIKYYTECFGMELLRKRD   54 (258)
Q Consensus        21 ~~~~~hv~l~v~--dl~~s~~FY~~~lG~~~~~~~~   54 (258)
                      +.+++||++.|+  |+++++.||+++|||+.....+
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~d   38 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFD   38 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEe
Confidence            478999999998  9999999999999999876644

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1.7e-07  Score=71.81  Aligned_cols=82  Identities=17%  Similarity=0.189  Sum_probs=50.9

Q ss_pred             cccceeeEEEEEeCC--HHHHHHHHHHhcCCEEeeeeccC-----CCCeEEEEeccCCCCceeEEEEEeecCC--Cc---
Q 025083           19 KDKRRFLHAVYRVGD--LDRTIKYYTECFGMELLRKRDVP-----EEKYSNAFLGFGPEQSYFVVELTYNYGV--TS---   86 (258)
Q Consensus        19 ~~~~~~~hv~l~v~d--l~~s~~FY~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~---   86 (258)
                      ..+.+++||++.|++  ++++++||+++|||+.....+..     .+..+...+..+  .....+.+..+...  ..   
T Consensus        20 ~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~--~~~i~~~lne~~~~~~~sqi~   97 (210)
T d1sqia2          20 CNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANY--EESIKMPINEPAPGRKKSQIQ   97 (210)
T ss_dssp             CCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECT--TSCCEEEEEECC-----CHHH
T ss_pred             CCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEec--CccccccccccCCCCcccHHH
Confidence            346789999999998  99999999999999875432211     111122223322  23444555443221  11   


Q ss_pred             ----ccCCCCeeeEEEEcCC
Q 025083           87 ----YDIGTGFGHLAIATED  102 (258)
Q Consensus        87 ----~~~~~~~~hia~~v~d  102 (258)
                          ...|.|+.||||.|+|
T Consensus        98 ~fl~~~~G~GiQHIAf~t~D  117 (210)
T d1sqia2          98 EYVDYNGGAGVQHIALRTED  117 (210)
T ss_dssp             HHHHHHTSSEEEEEEEEESC
T ss_pred             HHHhhcCCCCeeEEEEEcCC
Confidence                1347799999999999

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.43  E-value=2.9e-06  Score=59.77  Aligned_cols=112  Identities=12%  Similarity=0.041  Sum_probs=66.5

Q ss_pred             eEEec-ChhhHHHHHHHhcCCeEeeee-c------CCccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEE
Q 025083          125 MLRVG-DLGRSIKFYEKALGMKLLRTI-D------SPELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIS  196 (258)
Q Consensus       125 ~l~v~-d~~~s~~FY~~~lG~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~  196 (258)
                      -|... |.+++++||+++||-....+. .      .+++....+-+..++    ..+.+......    .+ .-.++.+.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g----~~~~~~d~~~~----~~-~~~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG----QVFMAIDANSG----TE-LPISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT----EEEEEEC------------CCCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECC----EEEEeecCCCC----CC-CCEEEEec
Confidence            45554 999999999999976544332 1      112223334444432    23333221111    11 12347788


Q ss_pred             ECChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          197 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       197 v~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +++.+ ..+++.++| +.|+++..++...++ +.++..++||.|+.|.|..+
T Consensus        80 ~~~~~-e~~~~~~~L-~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          80 VKDTI-EMERLFNGL-KDEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CSSHH-HHHHHHHHH-HTTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             cCCHH-HHHHHHHHh-ccCCEEecccccccc-cceEEEEECCCCCEEEEeCC
Confidence            88854 444554444 467799888777665 45888999999999999764

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.41  E-value=4e-07  Score=64.73  Aligned_cols=29  Identities=10%  Similarity=0.209  Sum_probs=21.9

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeeeec
Q 025083           26 HAVYRVGDLDRTIKYYTECFGMELLRKRD   54 (258)
Q Consensus        26 hv~l~v~dl~~s~~FY~~~lG~~~~~~~~   54 (258)
                      ++.+.|+|+++|++||+++||++++.+..
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~   38 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSL   38 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC----
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEe
Confidence            45566679999999999999999876543

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.41  E-value=1.2e-06  Score=67.98  Aligned_cols=80  Identities=24%  Similarity=0.332  Sum_probs=52.2

Q ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeeeccCC-----CCeEEEEeccCCCCceeEEEEEeecCC---Cc------
Q 025083           21 KRRFLHAVYRVGDLDRTIKYYTECFGMELLRKRDVPE-----EKYSNAFLGFGPEQSYFVVELTYNYGV---TS------   86 (258)
Q Consensus        21 ~~~~~hv~l~v~dl~~s~~FY~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~------   86 (258)
                      +.+|+||++.|+|++++.+||+++||+.........+     ...+..-+..  ..+...+.+..+...   ..      
T Consensus        20 l~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s--~~g~v~~~l~E~~~~~~~~sqi~~FL   97 (230)
T d1sqda2          20 IRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLAS--NDEMVLLPINEPVHGTKRKSQIQTYL   97 (230)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEEC--TTSCSEEEEEEECCC---CCHHHHHH
T ss_pred             cCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccC--CCcccceeEEeecCCCCCcchHHHHH
Confidence            6889999999999999999999999998776543221     1111222221  233445555544221   11      


Q ss_pred             -ccCCCCeeeEEEEcCC
Q 025083           87 -YDIGTGFGHLAIATED  102 (258)
Q Consensus        87 -~~~~~~~~hia~~v~d  102 (258)
                       ...|.|+.||||.|+|
T Consensus        98 ~~~~G~GiQHIAf~tdD  114 (230)
T d1sqda2          98 EHNEGAGLQHLALMSED  114 (230)
T ss_dssp             HHHTSCEEEEEEEEESC
T ss_pred             hhccCCceeEEEEEeCC
Confidence             2347799999999998

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.53  E-value=0.00092  Score=46.75  Aligned_cols=26  Identities=12%  Similarity=0.121  Sum_probs=21.4

Q ss_pred             EEeC-CHHHHHHHHHHhcCCEEeeeec
Q 025083           29 YRVG-DLDRTIKYYTECFGMELLRKRD   54 (258)
Q Consensus        29 l~v~-dl~~s~~FY~~~lG~~~~~~~~   54 (258)
                      |... |.++|++||+++||+++.....
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~   34 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLP   34 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEE
Confidence            3444 9999999999999999876654

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.13  E-value=0.012  Score=41.82  Aligned_cols=104  Identities=11%  Similarity=0.021  Sum_probs=59.3

Q ss_pred             EEecChhhHHHHHHHhcCCe-EeeeecC-------CccceeEEEeeecCCCceeEEEEEEecCCcccccCCceeeEEEEE
Q 025083          126 LRVGDLGRSIKFYEKALGMK-LLRTIDS-------PELKCALAMLGYAEEDQTTVLELAYSYGVTEYTKGNAYAQVAIST  197 (258)
Q Consensus       126 l~v~d~~~s~~FY~~~lG~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~g~~hi~~~v  197 (258)
                      +--.|.+++.+||+++||-. +......       +.+..-.+.+..++    ..+.....  ...+..++++ ++++.+
T Consensus         8 ~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g----~~lm~sD~--~~~~~~~~~~-sl~l~~   80 (156)
T d1u69a_           8 WYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG----IPCLGLNG--GPAFRHSEAF-SFQVAT   80 (156)
T ss_dssp             EESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT----EEEEEEEC--CTTCCCCTTE-EEEEEE
T ss_pred             eECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECC----eEEEeecC--CCCCCCCCCe-EEEEec
Confidence            34468999999999999643 3222111       11223334444432    22322221  1123334444 488999


Q ss_pred             CChHHHHHHHHHHHHHhCCeeecCCccCCCCCeeEEEEECCCCCEEEEEcc
Q 025083          198 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  248 (258)
Q Consensus       198 ~d~~~~~~~l~~~~~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  248 (258)
                      +|. +..+++.+.|.+ |+++..     +.     ..++|+.|..|.|+.+
T Consensus        81 d~~-eE~d~~f~~Lse-gG~~~~-----~~-----G~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          81 DDQ-AETDRLWNAIVD-NGGEES-----AC-----GWCRDKWGISWQITPR  119 (156)
T ss_dssp             SSH-HHHHHHHHHHHH-TTCEEC-----ST-----TEEECTTSCEEEEEEH
T ss_pred             CCH-HHHHHHHHHHhc-cCCCCC-----CC-----eEEECCCCCEEEeChH
Confidence            994 456666666665 444432     12     2699999999999955

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.02  E-value=0.0095  Score=41.24  Aligned_cols=27  Identities=7%  Similarity=0.245  Sum_probs=20.6

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEeee
Q 025083           26 HAVYRVGDLDRTIKYYTECFGMELLRK   52 (258)
Q Consensus        26 hv~l~v~dl~~s~~FY~~~lG~~~~~~   52 (258)
                      ++.+.-+|.+++++||+++||.+.+.+
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~   35 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQ   35 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEE
Confidence            444555689999999999999875543

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=94.64  E-value=0.37  Score=32.49  Aligned_cols=24  Identities=17%  Similarity=0.301  Sum_probs=18.7

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCCEEe
Q 025083           27 AVYRVG-DLDRTIKYYTECFGMELL   50 (258)
Q Consensus        27 v~l~v~-dl~~s~~FY~~~lG~~~~   50 (258)
                      .-|.+. |.+++++||+++||-..+
T Consensus         8 Pyl~f~g~a~eAi~FY~~vFg~~~v   32 (129)
T d1tsja_           8 TFLMFNNQAEEAVKLYTSLFEDSEI   32 (129)
T ss_dssp             EEEECSSCHHHHHHHHHHHSSSCEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCcEE
Confidence            345565 999999999999976443

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.95  E-value=1.7  Score=30.17  Aligned_cols=22  Identities=14%  Similarity=0.246  Sum_probs=17.4

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCE
Q 025083           27 AVYRVGDLDRTIKYYTECFGME   48 (258)
Q Consensus        27 v~l~v~dl~~s~~FY~~~lG~~   48 (258)
                      .-+.-.|.++|.+||+++||-.
T Consensus         6 ~L~F~Gna~EAl~FY~~vFg~~   27 (156)
T d1u69a_           6 CLWYDSAALEAATFYAETFPDS   27 (156)
T ss_dssp             EEEESSCHHHHHHHHHHHSTTE
T ss_pred             eeeECCcHHHHHHHHHHHcCCC
Confidence            3345569999999999999654

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=90.71  E-value=1.4  Score=31.44  Aligned_cols=31  Identities=16%  Similarity=0.046  Sum_probs=26.2

Q ss_pred             ceeeEEEEEeCCHHHHHHHHHHhcCC-EEeee
Q 025083           22 RRFLHAVYRVGDLDRTIKYYTECFGM-ELLRK   52 (258)
Q Consensus        22 ~~~~hv~l~v~dl~~s~~FY~~~lG~-~~~~~   52 (258)
                      ..++||+++|.+.+.+.++-+..+-. ++...
T Consensus        42 ~~~DHialR~n~~~~A~~w~~~l~~~G~llSe   73 (190)
T d1k4na_          42 LTADHISLRCHQNATAERWRRGFEQCGELLSE   73 (190)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEE
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhc
Confidence            57899999999999999999998876 45444