Citrus Sinensis ID: 025106

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLRPPSEVIMRLPDSTGL
Secondary Structure (PSIPRED)
cHHHHHHHHccccccHHHHHHHHHccccccHHHHHHcccccEEEEEEcccccEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccEEEEEEEEEcccccccccccccccccccEEEEEEEEcccccEEEEEEEEEEEEEEEEccccccEEEEcEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHcEEEEccHHHHHcccccccHHcccccccccc
Secondary Structure Prediction (SSPRO)
HHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHcccccEEEEEccccEEEEEcHHHEEccEEEccccccEEccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEcccccEEEEEEEEcccccccccccccccccccEEEEEEEEEccccEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccHHHcccccccc
Coil and Loop (DISEMBL)
meaamglmrrmppkhsETALSALLSLlpdhssdllsqvdqplqvlfdeesgkefilceynrdadsyrspwsnkyhppledalyppaelrKLEIEANEVFAIYRDqyyeggissvymweddneGFVACFLIkkdgsktaqgrrghleegawDAIHvievapeeegiaRYCLTSTVMLSLttdhessgtfslSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNsldqvyfgktkemvctlrppsevimrlpdstgl
Flexible Loop (DISEMBL)
meaamglmrrmppKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKemvctlrppsevimrlpdstgl
Low Complexity Region (SEG)
MEAAMGLMRRMPPKHSETalsallsllpdhssdllsQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLRPPSEVIMRLPDSTGL
Disordered region (IsUnstruct)
****************************************PLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDG*******RGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT***************************HLCNMGKMIE***GKLRNSLDQVYFGKTKEMVCTLR***************
Disordered Region (DISOPRED)
MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDG**************AWDAIHVIEVAPEEEGIARYCLTSTVMLSL***************IRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCT*****************
Disordered Region (DISEMBL)
***************SETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDG*********HLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTD*********SGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLRPPSEVIMRLPDSTGL
Disordered Region (DISPRO)
MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGS***********EGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLRP**************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLRPPSEVIMRLPDSTGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	258	2.2.26 [Sep-21-2011]
Q9M9G7	256	Probable F-actin-capping	yes	no	0.988	0.996	0.835	1e-127
P48603	276	F-actin-capping protein s	yes	no	0.906	0.847	0.548	4e-71
P14315	277	F-actin-capping protein s	no	no	0.906	0.844	0.528	1e-69
P13021	272	F-actin-capping protein s	yes	no	0.922	0.875	0.516	2e-69
Q5XI32	272	F-actin-capping protein s	yes	no	0.906	0.860	0.528	2e-69
Q5R507	272	F-actin-capping protein s	yes	no	0.906	0.860	0.528	2e-69
P47756	277	F-actin-capping protein s	no	no	0.906	0.844	0.528	3e-69
A0PFK7	277	F-actin-capping protein s	no	no	0.906	0.844	0.528	4e-69
P47757	277	F-actin-capping protein s	no	no	0.906	0.844	0.528	4e-69
P79136	301	F-actin-capping protein s	yes	no	0.906	0.777	0.528	4e-69

>sp|Q9M9G7|CAPZB_ARATH Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana GN=At1g71790 PE=2 SV=1

 Score =  454 bits (1167), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 214/256 (83%), Positives = 238/256 (92%), Gaps = 1/256 (0%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAA+GL+RRMPPK SETALSALLSL+P HSSDLLSQVD PLQVL D ESGK+FILCEYN
Sbjct: 1   MEAALGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESGKDFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKY PPLEDALYP +ELRKLE+EAN++FAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYLPPLEDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSK+  GRRG LEEGAWDAIHVI+V  EEE +A+YCLTST+MLSLTT
Sbjct: 121 NEGFVACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSEEEEMAQYCLTSTIMLSLTT 180

Query: 181 DHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVC 240
           D ESSG F LSGSIRRQM M+L+V++GHLCNMG+MIEE+EGKLRNSLDQVYFGKT+EMVC
Sbjct: 181 DDESSGKFGLSGSIRRQMKMELAVADGHLCNMGRMIEELEGKLRNSLDQVYFGKTREMVC 240

Query: 241 TLRPPSEVI-MRLPDS 255
           TLRPP+E++ MRLPD+
Sbjct: 241 TLRPPAEIVQMRLPDT 256

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
Arabidopsis thaliana (taxid: 3702)

>sp|P48603|CAPZB_DROME F-actin-capping protein subunit beta OS=Drosophila melanogaster GN=cpb PE=2 SV=1

 Score =  268 bits (684), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 136/248 (54%), Positives = 173/248 (69%), Gaps = 14/248 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           M+ A+ LMRR+PP+  E  L  L+ L PD   DLLS VDQPL++  D+E GK+++LC+YN
Sbjct: 6   MDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSN Y+PPLED   P   LRKLEIEAN  F  YR+ YYEGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF A  LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTST ML 
Sbjct: 126 H-GFAAVILIKKAGDGSKMIR--------GCWDSIHVVEVQEKTTGRTAHYKLTSTAMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
           L T+ + SGT +L GS+ RQ   D +VSE   H+ N+GKM+EEME K+RN+L+++YFGKT
Sbjct: 177 LQTNKQGSGTMNLGGSLTRQQEQDANVSESSPHIANIGKMVEEMENKIRNTLNEIYFGKT 236

Query: 236 KEMVCTLR 243
           K++V  LR
Sbjct: 237 KDIVNGLR 244

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Drosophila melanogaster (taxid: 7227)

>sp|P14315|CAPZB_CHICK F-actin-capping protein subunit beta isoforms 1 and 2 OS=Gallus gallus GN=CAPZB PE=1 SV=3

 Score =  263 bits (671), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 131/248 (52%), Positives = 174/248 (70%), Gaps = 14/248 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
           L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct: 177 LQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKT 236

Query: 236 KEMVCTLR 243
           K++V  LR
Sbjct: 237 KDIVNGLR 244

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. May play a role in the regulation of cell morphology and cytoskeletal organization.

Gallus gallus (taxid: 9031)

>sp|P13021|CAPZB_DICDI F-actin-capping protein subunit beta OS=Dictyostelium discoideum GN=acpA PE=1 SV=1

 Score =  262 bits (669), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 127/246 (51%), Positives = 175/246 (71%), Gaps = 8/246 (3%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           +   + LMRR+PP   E  L+ LL L+PD + DLLS +DQPL+V +D  S K+++LC+YN
Sbjct: 6   LSCCLDLMRRLPPSQIEDNLAGLLDLVPDLTEDLLSSIDQPLKVAYDAVSKKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWE-D 119
           RDADSYRSPWSNKY PPL  A YP ++LR +E++ANE+F IY + Y+EGG+SSVY W+ D
Sbjct: 66  RDADSYRSPWSNKYDPPLSGACYPSSKLRDIEVQANEIFEIYLNLYFEGGVSSVYCWDLD 125

Query: 120 DNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLT 179
           DN  F A  L+KK      Q ++G    G WD+IHV+EV   ++  A Y LTSTVMLS+ 
Sbjct: 126 DN--FAAVVLMKK---TQDQSKKGQPMRGTWDSIHVVEVKLGKKDKAVYKLTSTVMLSIE 180

Query: 180 TDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKE 237
           TD++++G  +L+GS+ RQ   + + +E   H  N+GKM+E+ME KLR +L+ +YFGKTKE
Sbjct: 181 TDNDNTGKVNLAGSLTRQDEKEYTFNEVDTHCVNIGKMVEDMESKLRQTLETIYFGKTKE 240

Query: 238 MVCTLR 243
           +V TLR
Sbjct: 241 VVNTLR 246

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.

Dictyostelium discoideum (taxid: 44689)

>sp|Q5XI32|CAPZB_RAT F-actin-capping protein subunit beta OS=Rattus norvegicus GN=Capzb PE=1 SV=1

 Score =  262 bits (669), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/248 (52%), Positives = 174/248 (70%), Gaps = 14/248 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
           L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct: 177 LQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKT 236

Query: 236 KEMVCTLR 243
           K++V  LR
Sbjct: 237 KDIVNGLR 244

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization.

Rattus norvegicus (taxid: 10116)

>sp|Q5R507|CAPZB_PONAB F-actin-capping protein subunit beta OS=Pongo abelii GN=CAPZB PE=2 SV=2

 Score =  262 bits (669), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/248 (52%), Positives = 174/248 (70%), Gaps = 14/248 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
           L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct: 177 LQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKT 236

Query: 236 KEMVCTLR 243
           K++V  LR
Sbjct: 237 KDIVNGLR 244

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization.

Pongo abelii (taxid: 9601)

>sp|P47756|CAPZB_HUMAN F-actin-capping protein subunit beta OS=Homo sapiens GN=CAPZB PE=1 SV=4

 Score =  261 bits (667), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 131/248 (52%), Positives = 174/248 (70%), Gaps = 14/248 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
           L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct: 177 LQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKT 236

Query: 236 KEMVCTLR 243
           K++V  LR
Sbjct: 237 KDIVNGLR 244

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization.

Homo sapiens (taxid: 9606)

>sp|A0PFK7|CAPZB_PIG F-actin-capping protein subunit beta OS=Sus scrofa GN=CAPZB PE=2 SV=1

 Score =  261 bits (667), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 131/248 (52%), Positives = 174/248 (70%), Gaps = 14/248 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
           L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct: 177 LQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKT 236

Query: 236 KEMVCTLR 243
           K++V  LR
Sbjct: 237 KDIVNGLR 244

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization.

Sus scrofa (taxid: 9823)

>sp|P47757|CAPZB_MOUSE F-actin-capping protein subunit beta OS=Mus musculus GN=Capzb PE=1 SV=3

 Score =  261 bits (667), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 131/248 (52%), Positives = 174/248 (70%), Gaps = 14/248 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query: 178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
           L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct: 177 LQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKT 236

Query: 236 KEMVCTLR 243
           K++V  LR
Sbjct: 237 KDIVNGLR 244

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization.

Mus musculus (taxid: 10090)

>sp|P79136|CAPZB_BOVIN F-actin-capping protein subunit beta OS=Bos taurus GN=CAPZB PE=1 SV=1

 Score =  261 bits (666), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 131/248 (52%), Positives = 174/248 (70%), Gaps = 14/248 (5%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 35  LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 94

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 95  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 154

Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 155 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 205

Query: 178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
           L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct: 206 LQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKT 265

Query: 236 KEMVCTLR 243
           K++V  LR
Sbjct: 266 KDIVNGLR 273

F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. The isoform beta-3 may play a role in spermatogenesis. Alternatively, may play a role in later maturation steps such as capacitation and fertilization which involve changes of membrane domains. May play a role in the regulation of cell morphology and cytoskeletal organization.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
224082526	258	predicted protein [Populus trichocarpa]	0.980	0.980	0.897	1e-128
356576111	257	PREDICTED: LOW QUALITY PROTEIN: probable	0.988	0.992	0.859	1e-127
225463119	256	PREDICTED: probable F-actin-capping prot	0.988	0.996	0.859	1e-127
388520833	256	unknown [Lotus japonicus]	0.988	0.996	0.855	1e-126
147838889	256	hypothetical protein VITISV_027402 [Viti	0.988	0.996	0.859	1e-126
356535733	257	PREDICTED: probable F-actin-capping prot	0.988	0.992	0.859	1e-126
30698814	256	capping protein (actin filament) muscle	0.988	0.996	0.835	1e-125
255572343	255	f-actin capping protein beta subunit, pu	0.980	0.992	0.893	1e-125
388500112	256	unknown [Medicago truncatula]	0.988	0.996	0.847	1e-125
255638293	257	unknown [Glycine max]	0.992	0.996	0.844	1e-124

>gi|224082526|ref|XP_002306729.1| predicted protein [Populus trichocarpa] gi|222856178|gb|EEE93725.1| predicted protein [Populus trichocarpa]

 Score =  462 bits (1189), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 227/253 (89%), Positives = 242/253 (95%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAAMGLMRR+ PK SETALSALLSLLP HSSDLLSQVDQPLQVL D ESGKE+ILCEYN
Sbjct: 1   MEAAMGLMRRIHPKQSETALSALLSLLPHHSSDLLSQVDQPLQVLCDLESGKEYILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKY+PPLEDALYP +ELRKLE+EANEVFA+YRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYYPPLEDALYPSSELRKLEVEANEVFAVYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRGHL+EGAWDAIHVIEV PEEE +A YCLTST+MLSLTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGHLQEGAWDAIHVIEVGPEEESMAHYCLTSTIMLSLTT 180

Query: 181 DHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVC 240
           + ESSGTFSLSGSIRRQMNMDLSV++GHLCNMG+MIEEMEGKLRNSLDQVYFGKTKEMVC
Sbjct: 181 NDESSGTFSLSGSIRRQMNMDLSVADGHLCNMGRMIEEMEGKLRNSLDQVYFGKTKEMVC 240

Query: 241 TLRPPSEVIMRLP 253
           TLRPPSEV++RLP
Sbjct: 241 TLRPPSEVVLRLP 253

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576111|ref|XP_003556177.1| PREDICTED: LOW QUALITY PROTEIN: probable F-actin-capping protein subunit beta-like [Glycine max]

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/256 (85%), Positives = 238/256 (92%), Gaps = 1/256 (0%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAAMGLMRR+PPKH+ETALSALLSL+PD+SSDLLSQVDQPLQVL D E GKEFILCEYN
Sbjct: 1   MEAAMGLMRRIPPKHTETALSALLSLMPDNSSDLLSQVDQPLQVLCDVECGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED   P +ELRKLEIEAN++FAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRG+LEEGAWDAIHVIEV PEEE    Y LTSTVML+LTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEENTNYRLTSTVMLTLTT 180

Query: 181 DHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVC 240
           ++ESSGTFSLSGSIRRQM+M LSV++GHLCNMG+MIEEME KLRNSLDQVYFGKT+EMVC
Sbjct: 181 NNESSGTFSLSGSIRRQMSMKLSVADGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVC 240

Query: 241 TLRPPSEVI-MRLPDS 255
           TLRPPSEV  +R+PDS
Sbjct: 241 TLRPPSEVAQLRMPDS 256

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463119|ref|XP_002265135.1| PREDICTED: probable F-actin-capping protein subunit beta [Vitis vinifera] gi|297739352|emb|CBI29342.3| unnamed protein product [Vitis vinifera]

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/256 (85%), Positives = 238/256 (92%), Gaps = 1/256 (0%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAA+GLMRR+ PKHSETALSALL LLP  SSDLLSQVDQPLQVL D +SGKEFILCEYN
Sbjct: 1   MEAALGLMRRIHPKHSETALSALLGLLPHLSSDLLSQVDQPLQVLCDVDSGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED  YP +ELRKLEIEANEVF+IYRDQYYEGGISSVYMWED+
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGPYPSSELRKLEIEANEVFSIYRDQYYEGGISSVYMWEDE 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFV CFLIKKDGSKT  GRRG+L+EG+WDAIHVIEV P+EEGI  YCLTSTVMLSLTT
Sbjct: 121 NEGFVGCFLIKKDGSKTGHGRRGYLQEGSWDAIHVIEVGPDEEGITHYCLTSTVMLSLTT 180

Query: 181 DHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVC 240
           + +SSGTFSLSGSIRRQMNMDLS+++GHLCNMGKMIEEME KLRNSLDQVYFGKTKEMVC
Sbjct: 181 NDQSSGTFSLSGSIRRQMNMDLSIADGHLCNMGKMIEEMESKLRNSLDQVYFGKTKEMVC 240

Query: 241 TLRPPSEVI-MRLPDS 255
           TLRPP+EV+ MRLP+S
Sbjct: 241 TLRPPAEVLPMRLPES 256

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520833|gb|AFK48478.1| unknown [Lotus japonicus]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 219/256 (85%), Positives = 238/256 (92%), Gaps = 1/256 (0%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAAMGLMRR+PPKH++TALSALLSL+P+HSSDLLSQVDQPLQVL D +SGKEFILCEYN
Sbjct: 1   MEAAMGLMRRIPPKHTDTALSALLSLMPNHSSDLLSQVDQPLQVLCDVDSGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED   P AELRKLEIEA+++FAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGSLPSAELRKLEIEASDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRG+LEEGAWDAIHVIEV PEEE    Y LTSTVML+LTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEENTNYRLTSTVMLTLTT 180

Query: 181 DHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVC 240
            +ESSGTFSLSGSIRRQMNM LSV++GHLCNMG+MIEEME KLRNSLDQVYFGKT+EMVC
Sbjct: 181 SNESSGTFSLSGSIRRQMNMKLSVADGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVC 240

Query: 241 TLRPPSEVI-MRLPDS 255
           TLRPP+EV  MR+P+S
Sbjct: 241 TLRPPAEVAQMRIPES 256

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838889|emb|CAN65826.1| hypothetical protein VITISV_027402 [Vitis vinifera]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 220/256 (85%), Positives = 237/256 (92%), Gaps = 1/256 (0%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAA+GLMRR+ PKHSETALSALL LLP  SSDLLSQVDQPLQVL D +SGKEFILCEYN
Sbjct: 1   MEAALGLMRRIHPKHSETALSALLGLLPHLSSDLLSQVDQPLQVLCDVDSGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED  YP +ELRKLEIEANEVF+IYRDQYYEGGISSVYMWED+
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGPYPSSELRKLEIEANEVFSIYRDQYYEGGISSVYMWEDE 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFV CFLIKKDGSKT  GRRG+L+EG+WDAIHVIEV P+EEGI  YCLTSTVMLSLTT
Sbjct: 121 NEGFVXCFLIKKDGSKTGHGRRGYLQEGSWDAIHVIEVGPDEEGITHYCLTSTVMLSLTT 180

Query: 181 DHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVC 240
           + +SSGTFSLSGSIRRQMNMDLS+++GHLCNMGKMIEEME KLRNSLDQVYFGKTKEMVC
Sbjct: 181 NDQSSGTFSLSGSIRRQMNMDLSIADGHLCNMGKMIEEMESKLRNSLDQVYFGKTKEMVC 240

Query: 241 TLRPPSEVI-MRLPDS 255
           TLRPP+EV+ MRLP S
Sbjct: 241 TLRPPAEVLPMRLPXS 256

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535733|ref|XP_003536398.1| PREDICTED: probable F-actin-capping protein subunit beta-like [Glycine max]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 220/256 (85%), Positives = 236/256 (92%), Gaps = 1/256 (0%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEA MGLMRR+PPKH+ETALSALLSL+P HSSDLLSQVDQPLQVL D E GKEFILCEYN
Sbjct: 1   MEAVMGLMRRIPPKHTETALSALLSLMPHHSSDLLSQVDQPLQVLCDVECGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED   P +ELRKLEIEAN++FAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRG+LEEGAWDAIHVIEV PEEE    Y LTSTVML+LTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEENTNYRLTSTVMLTLTT 180

Query: 181 DHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVC 240
           ++ESSGTFSLSGSIRRQM+M LSV++GHLCNMG+MIEEME KLRNSLDQVYFGKT+EMVC
Sbjct: 181 NNESSGTFSLSGSIRRQMSMKLSVADGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVC 240

Query: 241 TLRPPSEVI-MRLPDS 255
           TLRPPSEV  MR+PDS
Sbjct: 241 TLRPPSEVAQMRMPDS 256

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30698814|ref|NP_177324.2| capping protein (actin filament) muscle Z-line, beta [Arabidopsis thaliana] gi|34222650|sp|Q9M9G7.1|CAPZB_ARATH RecName: Full=Probable F-actin-capping protein subunit beta; AltName: Full=CapZ-beta gi|7239506|gb|AAF43232.1|AC012654_16 Similar to the F-actin capping protein beta subunit from Dictyostelium discoideum gi|115598 [Arabidopsis thaliana] gi|117958773|gb|ABK59688.1| At1g71790 [Arabidopsis thaliana] gi|332197112|gb|AEE35233.1| capping protein (actin filament) muscle Z-line, beta [Arabidopsis thaliana]

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 214/256 (83%), Positives = 238/256 (92%), Gaps = 1/256 (0%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAA+GL+RRMPPK SETALSALLSL+P HSSDLLSQVD PLQVL D ESGK+FILCEYN
Sbjct: 1   MEAALGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESGKDFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKY PPLEDALYP +ELRKLE+EAN++FAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYLPPLEDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSK+  GRRG LEEGAWDAIHVI+V  EEE +A+YCLTST+MLSLTT
Sbjct: 121 NEGFVACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSEEEEMAQYCLTSTIMLSLTT 180

Query: 181 DHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVC 240
           D ESSG F LSGSIRRQM M+L+V++GHLCNMG+MIEE+EGKLRNSLDQVYFGKT+EMVC
Sbjct: 181 DDESSGKFGLSGSIRRQMKMELAVADGHLCNMGRMIEELEGKLRNSLDQVYFGKTREMVC 240

Query: 241 TLRPPSEVI-MRLPDS 255
           TLRPP+E++ MRLPD+
Sbjct: 241 TLRPPAEIVQMRLPDT 256

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572343|ref|XP_002527110.1| f-actin capping protein beta subunit, putative [Ricinus communis] gi|223533533|gb|EEF35273.1| f-actin capping protein beta subunit, putative [Ricinus communis]

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/253 (89%), Positives = 238/253 (94%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAAMGLMRR+ PK SETALSALLSLLP HSSDLLSQVDQPLQVL D +SGKEFILCEYN
Sbjct: 1   MEAAMGLMRRIHPKQSETALSALLSLLPHHSSDLLSQVDQPLQVLCDLDSGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKY+PPLEDAL P AELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYYPPLEDALCPSAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFV CFL+KKDGSKT QGRRG+L+EGAWDAIHVI+V PEEEG A YCLTSTVMLSLTT
Sbjct: 121 NEGFVGCFLVKKDGSKTGQGRRGYLQEGAWDAIHVIQVGPEEEGTAHYCLTSTVMLSLTT 180

Query: 181 DHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVC 240
           + ESSGTF+LSGSIRRQMN DLSV++GHLCNMG MIEEMEGKLRNSLDQVYFGKTKEMVC
Sbjct: 181 NDESSGTFNLSGSIRRQMNRDLSVADGHLCNMGGMIEEMEGKLRNSLDQVYFGKTKEMVC 240

Query: 241 TLRPPSEVIMRLP 253
           TLRPPSEV+MRLP
Sbjct: 241 TLRPPSEVVMRLP 253

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500112|gb|AFK38122.1| unknown [Medicago truncatula]

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/256 (84%), Positives = 237/256 (92%), Gaps = 1/256 (0%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAAMGLMRR+PPKH+ETALSALLSL+P+HSSDLLSQVDQPLQVL D + GKEFILCEYN
Sbjct: 1   MEAAMGLMRRIPPKHTETALSALLSLMPNHSSDLLSQVDQPLQVLCDVDCGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYR PWSNKYHPPLED   P +ELRKLEIEAN++FAIYRDQYYEGGISSVYMWED+
Sbjct: 61  RDADSYRPPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQYYEGGISSVYMWEDE 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRG+LEEGAWDAIHVIEV PEEE    Y LTSTVML+LTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEEDTNYRLTSTVMLTLTT 180

Query: 181 DHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVC 240
           ++ESSGTFSLSGSIRRQM+M LSV++GHLCNMG+MIEEME KLRNSLDQVYFGKT+EMVC
Sbjct: 181 NNESSGTFSLSGSIRRQMSMRLSVADGHLCNMGRMIEEMESKLRNSLDQVYFGKTREMVC 240

Query: 241 TLRPPSEVI-MRLPDS 255
           TLRPPSEV  MR+P+S
Sbjct: 241 TLRPPSEVAQMRMPES 256

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638293|gb|ACU19459.1| unknown [Glycine max]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 217/257 (84%), Positives = 235/257 (91%), Gaps = 1/257 (0%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           MEAAMGLMRR+PPKH+ETALSALLSL+PD+SSDLLSQVDQPLQVL D E GKEFILCEYN
Sbjct: 1   MEAAMGLMRRIPPKHTETALSALLSLMPDNSSDLLSQVDQPLQVLCDVECGKEFILCEYN 60

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKYHPPLED   P +ELRKLEIEAN++FAIYRDQYYEGGISSVYMWEDD
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
           NEGFVACFLIKKDGSKT QGRRG+LEEGAWDAIHVIEV PEEE    Y LTSTVML+LTT
Sbjct: 121 NEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEENTNYRLTSTVMLTLTT 180

Query: 181 DHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVC 240
           ++ESSGTFSL GSIRRQM+M LSV++GHLCNMG+MIEEME KLRNSLDQ YFGKT+EMVC
Sbjct: 181 NNESSGTFSLFGSIRRQMSMKLSVADGHLCNMGRMIEEMESKLRNSLDQEYFGKTREMVC 240

Query: 241 TLRPPSEVI-MRLPDST 256
           TLRPP EV  +R+PDS 
Sbjct: 241 TLRPPFEVAQLRMPDSA 257

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
TAIR|locus:2013026	256	CPB "capping protein B" [Arabi	0.988	0.996	0.773	1.5e-106
FB|FBgn0011570	276	cpb "capping protein beta" [Dr	0.906	0.847	0.512	9e-61
UNIPROTKB|F2Z4M9	276	CAPZB "F-actin-capping protein	0.906	0.847	0.491	9.3e-59
UNIPROTKB|P14315	277	CAPZB "F-actin-capping protein	0.906	0.844	0.491	9.3e-59
ZFIN|ZDB-GENE-030131-7023	273	capzb "capping protein (actin	0.906	0.857	0.491	9.3e-59
UNIPROTKB|P79136	301	CAPZB "F-actin-capping protein	0.906	0.777	0.491	1.2e-58
UNIPROTKB|F1PQS3	371	CAPZB "Uncharacterized protein	0.906	0.630	0.491	1.2e-58
UNIPROTKB|B1AK88	301	CAPZB "Capping protein (Actin	0.906	0.777	0.491	1.2e-58
UNIPROTKB|P47756	277	CAPZB "F-actin-capping protein	0.906	0.844	0.491	1.2e-58
UNIPROTKB|A0PFK7	277	CAPZB "F-actin-capping protein	0.906	0.844	0.491	1.2e-58

TAIR|locus:2013026 CPB "capping protein B" [Arabidopsis thaliana (taxid:3702)]

 Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
 Identities = 198/256 (77%), Positives = 221/256 (86%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             MEAA+GL+RRMPPK SET                  QVD PLQVL D ESGK+FILCEYN
Sbjct:     1 MEAALGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESGKDFILCEYN 60

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RDADSYRSPWSNKY PPLEDALYP +ELRKLE+EAN++FAIYRDQYYEGGISSVYMWEDD
Sbjct:    61 RDADSYRSPWSNKYLPPLEDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVYMWEDD 120

Query:   121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
             NEGFVACFLIKKDGSK+  GRRG LEEGAWDAIHVI+V  EEE +A+YCLTST+MLSLTT
Sbjct:   121 NEGFVACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSEEEEMAQYCLTSTIMLSLTT 180

Query:   181 DHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVC 240
             D ESSG F LSGSIRRQM M+L+V++GHLCNMG+MIEE+EGKLRNSLDQVYFGKT+EMVC
Sbjct:   181 DDESSGKFGLSGSIRRQMKMELAVADGHLCNMGRMIEELEGKLRNSLDQVYFGKTREMVC 240

Query:   241 TLRPPSEVI-MRLPDS 255
             TLRPP+E++ MRLPD+
Sbjct:   241 TLRPPAEIVQMRLPDT 256

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA;ISS

GO:0030036 "actin cytoskeleton organization" evidence=ISS;IMP

GO:0007015 "actin filament organization" evidence=IMP

GO:0009408 "response to heat" evidence=IMP

GO:0051693 "actin filament capping" evidence=IMP

FB|FBgn0011570 cpb "capping protein beta" [Drosophila melanogaster (taxid:7227)]

 Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
 Identities = 127/248 (51%), Positives = 163/248 (65%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             M+ A+ LMRR+PP+  E                    VDQPL++  D+E GK+++LC+YN
Sbjct:     6 MDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYLLCDYN 65

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSN Y+PPLED   P   LRKLEIEAN  F  YR+ YYEGG+SSVY+W+ D
Sbjct:    66 RDGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVYLWDLD 125

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF A  LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTST ML 
Sbjct:   126 H-GFAAVILIKKAGDGSKMIRG--------CWDSIHVVEVQEKTTGRTAHYKLTSTAMLW 176

Query:   178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
             L T+ + SGT +L GS+ RQ   D +VSE   H+ N+GKM+EEME K+RN+L+++YFGKT
Sbjct:   177 LQTNKQGSGTMNLGGSLTRQQEQDANVSESSPHIANIGKMVEEMENKIRNTLNEIYFGKT 236

Query:   236 KEMVCTLR 243
             K++V  LR
Sbjct:   237 KDIVNGLR 244

GO:0051016 "barbed-end actin filament capping" evidence=IDA

GO:0008290 "F-actin capping protein complex" evidence=ISS;NAS

GO:0003779 "actin binding" evidence=ISS

GO:0030832 "regulation of actin filament length" evidence=IMP

GO:0007015 "actin filament organization" evidence=IMP

GO:0071203 "WASH complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IMP

GO:0010591 "regulation of lamellipodium assembly" evidence=IMP

GO:0035220 "wing disc development" evidence=IMP

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0007303 "cytoplasmic transport, nurse cell to oocyte" evidence=IMP

GO:0000902 "cell morphogenesis" evidence=IMP

GO:0051490 "negative regulation of filopodium assembly" evidence=IMP

UNIPROTKB|F2Z4M9 CAPZB "F-actin-capping protein subunit beta isoforms 1 and 2" [Gallus gallus (taxid:9031)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 122/248 (49%), Positives = 163/248 (65%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:     5 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 64

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    65 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 124

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   125 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 175

Query:   178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
             L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct:   176 LQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKT 235

Query:   236 KEMVCTLR 243
             K++V  LR
Sbjct:   236 KDIVNGLR 243

GO:0003779 "actin binding" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030032 "lamellipodium assembly" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0071203 "WASH complex" evidence=IEA

UNIPROTKB|P14315 CAPZB "F-actin-capping protein subunit beta isoforms 1 and 2" [Gallus gallus (taxid:9031)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 122/248 (49%), Positives = 163/248 (65%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:     6 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    66 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   126 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query:   178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
             L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct:   177 LQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKT 236

Query:   236 KEMVCTLR 243
             K++V  LR
Sbjct:   237 KDIVNGLR 244

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0071203 "WASH complex" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0051693 "actin filament capping" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0022604 "regulation of cell morphogenesis" evidence=ISS

GO:0005829 "cytosol" evidence=TAS

ZFIN|ZDB-GENE-030131-7023 capzb "capping protein (actin filament) muscle Z-line, beta" [Danio rerio (taxid:7955)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 122/248 (49%), Positives = 162/248 (65%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:     6 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PP++D   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    66 RDGDSYRSPWSNKYEPPIDDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   126 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query:   178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
             L T    SGT +L GS+ RQM  D +VSE   H+ N+G+++EEME K+R++L+++YFGKT
Sbjct:   177 LQTTKTGSGTMNLGGSLTRQMEKDETVSESSPHIANIGRLVEEMENKIRSTLNEIYFGKT 236

Query:   236 KEMVCTLR 243
             K++V  LR
Sbjct:   237 KDIVNGLR 244

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0071203 "WASH complex" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

UNIPROTKB|P79136 CAPZB "F-actin-capping protein subunit beta" [Bos taurus (taxid:9913)]

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 122/248 (49%), Positives = 163/248 (65%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:    35 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 94

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    95 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 154

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   155 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 205

Query:   178 LTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
             L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct:   206 LQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKT 265

Query:   236 KEMVCTLR 243
             K++V  LR
Sbjct:   266 KDIVNGLR 273

GO:0005515 "protein binding" evidence=IPI

GO:0022604 "regulation of cell morphogenesis" evidence=ISS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0071203 "WASH complex" evidence=ISS

GO:0033150 "cytoskeletal calyx" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0030032 "lamellipodium assembly" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0051693 "actin filament capping" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

UNIPROTKB|F1PQS3 CAPZB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 122/248 (49%), Positives = 163/248 (65%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:   105 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 164

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:   165 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 224

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   225 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 275

Query:   178 LTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
             L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct:   276 LQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKT 335

Query:   236 KEMVCTLR 243
             K++V  LR
Sbjct:   336 KDIVNGLR 343

GO:0071203 "WASH complex" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0030032 "lamellipodium assembly" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|B1AK88 CAPZB "Capping protein (Actin filament) muscle Z-line, beta, isoform CRA_d" [Homo sapiens (taxid:9606)]

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 122/248 (49%), Positives = 163/248 (65%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:    35 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 94

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    95 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 154

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   155 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 205

Query:   178 LTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
             L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct:   206 LQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKT 265

Query:   236 KEMVCTLR 243
             K++V  LR
Sbjct:   266 KDIVNGLR 273

GO:0003779 "actin binding" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0071203 "WASH complex" evidence=IEA

UNIPROTKB|P47756 CAPZB "F-actin-capping protein subunit beta" [Homo sapiens (taxid:9606)]

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 122/248 (49%), Positives = 163/248 (65%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:     6 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    66 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   126 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query:   178 LTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
             L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct:   177 LQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKT 236

Query:   236 KEMVCTLR 243
             K++V  LR
Sbjct:   237 KDIVNGLR 244

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0051693 "actin filament capping" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030032 "lamellipodium assembly" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0006928 "cellular component movement" evidence=TAS

GO:0005856 "cytoskeleton" evidence=TAS

GO:0071203 "WASH complex" evidence=IDA

GO:0007010 "cytoskeleton organization" evidence=IMP

GO:0022604 "regulation of cell morphogenesis" evidence=IMP

GO:0015629 "actin cytoskeleton" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

UNIPROTKB|A0PFK7 CAPZB "F-actin-capping protein subunit beta" [Sus scrofa (taxid:9823)]

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 122/248 (49%), Positives = 163/248 (65%)

Query:     1 MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
             ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct:     6 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query:    61 RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
             RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct:    66 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query:   121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
             + GF    LIKK  DGSK  +G         WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct:   126 H-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176

Query:   178 LTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
             L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct:   177 LQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKT 236

Query:   236 KEMVCTLR 243
             K++V  LR
Sbjct:   237 KDIVNGLR 244

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0008290 "F-actin capping protein complex" evidence=IEA

GO:0022604 "regulation of cell morphogenesis" evidence=ISS

GO:0007010 "cytoskeleton organization" evidence=ISS

GO:0071203 "WASH complex" evidence=ISS

GO:0051693 "actin filament capping" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P34686	CAPZB_CAEEL	No assigned EC number	0.5060	0.9069	0.8666	yes	no
Q5XI32	CAPZB_RAT	No assigned EC number	0.5282	0.9069	0.8602	yes	no
P48603	CAPZB_DROME	No assigned EC number	0.5483	0.9069	0.8478	yes	no
Q9M9G7	CAPZB_ARATH	No assigned EC number	0.8359	0.9883	0.9960	yes	no
Q6CBA2	CAPZB_YARLI	No assigned EC number	0.4337	0.8720	0.8653	yes	no
Q6CPK5	CAPZB_KLULA	No assigned EC number	0.3722	0.9302	0.8602	yes	no
P13021	CAPZB_DICDI	No assigned EC number	0.5162	0.9224	0.875	yes	no
Q6FQL7	CAPZB_CANGA	No assigned EC number	0.4196	0.8875	0.8481	yes	no
Q2URJ3	CAPZB_ASPOR	No assigned EC number	0.4530	0.9108	0.8834	yes	no
Q4INI2	CAPZB_GIBZE	No assigned EC number	0.4406	0.9108	0.8333	yes	no
Q5BGP0	CAPZB_EMENI	No assigned EC number	0.4530	0.9108	0.8834	yes	no
Q9HGP5	CAPZB_SCHPO	No assigned EC number	0.4301	0.9573	0.9216	yes	no
P79136	CAPZB_BOVIN	No assigned EC number	0.5282	0.9069	0.7774	yes	no
Q5R507	CAPZB_PONAB	No assigned EC number	0.5282	0.9069	0.8602	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_V0447	hypothetical protein (258 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_LG_XIII0081	hypothetical protein (304 aa)				•	•	•	•		0.857
	estExt_fgenesh4_pg.C_1330034	hypothetical protein (303 aa)				•	•	•	•		0.832
	estExt_fgenesh4_pg.C_880004	hypothetical protein (169 aa)				•	•				0.669
	estExt_fgenesh4_pg.C_LG_XIV0815	hypothetical protein (379 aa)				•	•		•		0.595

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	258
pfam01115	240	pfam01115, F_actin_cap_B, F-actin capping protein,	1e-118

>gnl|CDD|144634 pfam01115, F_actin_cap_B, F-actin capping protein, beta subunit

 Score =  338 bits (868), Expect = e-118
 Identities = 132/245 (53%), Positives = 169/245 (68%), Gaps = 12/245 (4%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++AA+ L+RR+PPK  E  L+ L+ L PD + DLLS VDQPL++  D E+GK+++ C+YN
Sbjct: 2   LDAALDLLRRLPPKKIEENLNDLIDLAPDLTEDLLSSVDQPLKIKKDSETGKDYLCCDYN 61

Query: 61  RDADSYRSPWSNKYHPPLE-DALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWE- 118
           RD DSYRSPWSNKY PPLE D   P   LRKLEI+ANE F +YRD YYEGG+SSVY+W+ 
Sbjct: 62  RDGDSYRSPWSNKYFPPLEADGPVPSERLRKLEIKANEAFDVYRDLYYEGGVSSVYLWDL 121

Query: 119 DDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSL 178
           DD +GF    LIKK G             G+WD+IHV EV     G A Y LTSTV+L L
Sbjct: 122 DDEDGFAGVVLIKKAGDSGEGIS------GSWDSIHVFEVTETSSGTAHYKLTSTVILEL 175

Query: 179 TTDHESSGTFSLSGSIRRQMNMDLSVSE----GHLCNMGKMIEEMEGKLRNSLDQVYFGK 234
            TD   SG  +LSGS+ RQ   DL VS+     H+ N+G++IE+ME K+RN L++VYFGK
Sbjct: 176 KTDSSKSGPLNLSGSLTRQKEKDLKVSDDNTTSHIVNIGRLIEDMENKMRNLLEEVYFGK 235

Query: 235 TKEMV 239
           TK++V
Sbjct: 236 TKDIV 240

Length = 240

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	258
PF01115	242	F_actin_cap_B: F-actin capping protein, beta subun	100.0
KOG3174	275	consensus F-actin capping protein, beta subunit [C	100.0
PF01267	271	F-actin_cap_A: F-actin capping protein alpha subun	98.48
KOG0836	282	consensus F-actin capping protein, alpha subunit [	96.44

>PF01115 F_actin_cap_B: F-actin capping protein, beta subunit; InterPro: IPR001698 This entry represents a component of the WASH complex

Probab=100.00  E-value=1.6e-122  Score=831.12  Aligned_cols=233  Identities=59%  Similarity=1.046  Sum_probs=206.7

Q ss_pred             ChhHhhhhhcCCcccHHHHHHHHHccCcchhHHHhhcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCCCCCCC-
Q 025106            1 MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLE-   79 (258)
Q Consensus         1 ~d~aLdLlRRlpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~l~-   79 (258)
                      +||||||||||||++||+||++||+|+|+||+||||+|||||||++|+++||+||||||||||||||||||||||||++ 
T Consensus         2 ~d~aLdLlRRlpP~~ie~nl~~l~~L~Pdl~edLLssVD~PLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~~~~   81 (242)
T PF01115_consen    2 LDAALDLLRRLPPKKIEKNLSNLIDLVPDLTEDLLSSVDQPLKVARDKETGKDYLLCDYNRDGDSYRSPWSNKYYPPLEG   81 (242)
T ss_dssp             HHHHHHHHTTS-GGGHHHHHHHHHHHSGGGHHHHHHHS----EEEEETTTTEEEEESGGGEETTEEE-TTT--EES--S-
T ss_pred             hhHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHhCCCcceEEEchhhCCeeEeecccCCcccccCCCCcccCCCccc
Confidence            5899999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             ----CCCCCChHHHHHHHHHHHHHHHHHHhhhcCCceeEEEeecCCC-CeeEEEEEEecCCCCcCCCCCCCCCccceeeE
Q 025106           80 ----DALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNE-GFVACFLIKKDGSKTAQGRRGHLEEGAWDAIH  154 (258)
Q Consensus        80 ----dg~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~-gFag~vLiKK~~~~s~~~~~~~~~~G~WDSIH  154 (258)
                          ||++||++||+||++||++||+||+||||||||||||||+|++ ||||||||||++++++.      .+|+|||||
T Consensus        82 ~~~~dg~~PS~~LR~LEi~aN~~Fd~Yr~lYyeGGvSSVYlWd~d~~~gFag~vLiKK~~~~~~~------~~g~WDSIH  155 (242)
T PF01115_consen   82 DDLEDGPVPSERLRKLEIEANEAFDIYRDLYYEGGVSSVYLWDLDDDDGFAGVVLIKKEGDPSNE------ISGSWDSIH  155 (242)
T ss_dssp             ----S-----HHHHHHHHHHHHHHHHHHHHHHSSSEEEEEEEEETT--EEEEEEEEEEEE-TGCC------EEEEEEEEE
T ss_pred             cccCCCCCChHHHHHHHHHHHHHHHHHHHHHhCCCeeEEEEEecCCCcceeEEEEEEecCCCCCC------ccceEeeeE
Confidence                9999999999999999999999999999999999999999976 99999999999666554      789999999


Q ss_pred             EEEEeecCCceeEEEEeeEEEEEeeeCCCCcceeeecceeeeeecccccccc--chhhhhhhHHHHHHHHHHhhhhhhhh
Q 025106          155 VIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYF  232 (258)
Q Consensus       155 V~EV~~~~~~~~~YklTSTvmL~l~~~~~~~g~~~LsGsltRq~e~~~~~~~--~Hi~NiG~mIEdmE~~mR~~L~~VYf  232 (258)
                      ||||++.++++|||||||||||+|++++++.|.|+|||+||||+|+++++++  +||+|||+|||+||++||++||+|||
T Consensus       156 V~Ev~~~~~~~a~YklTSTV~L~l~~~~~~~g~~~LsGsltrq~e~~~~~~~~~~Hi~NiG~lIEdmE~~mR~~L~~VYf  235 (242)
T PF01115_consen  156 VFEVTESSSGTAHYKLTSTVMLSLKTNDDASGSFNLSGSLTRQTEKDLPVSDSSSHIANIGRLIEDMENKMRNLLQEVYF  235 (242)
T ss_dssp             EEEEEEETTSEEEEEEEEEEEEEEEEEESSSSEEEEEEEEEEEEEEEEE-SSSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCCeEEEEEEEEEEEEEecCCCCCceEeecceeehhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999976555999999999999999988889999999999999999999987  99999999999999999999999999


Q ss_pred             ccchHhh
Q 025106          233 GKTKEMV  239 (258)
Q Consensus       233 ~KtkdIv  239 (258)
                      |||||||
T Consensus       236 ~KtkdIv  242 (242)
T PF01115_consen  236 GKTKDIV  242 (242)
T ss_dssp             THHHHHH
T ss_pred             hhhhhcC
Confidence            9999997

The WASH complex is present at the surface of endosomes and recruits and activates the Arp2/3 complex to induce actin polymerisation. The WASH complex plays a key role in the fission of tubules that serve as transport intermediates during endosome sorting []. The WASH complex's subunit structure: F-actin-capping protein subunit alpha (CAPZA1, CAPZA2 or CAPZA3), F-actin-capping protein subunit beta (CAPZB), WASH (WASH1, WASH2P, WASH3P, WASH4P, WASH5P or WASH6P), FAM21 (FAM21A, FAM21B or FAM21C), KIAA1033, KIAA0196 (strumpellin) and CCDC53. The actin filament system, a prominent part of the cytoskeleton in eukaryotic cells, is both a static structure and a dynamic network that can undergo rearrangements: it is thought to be involved in processes such as cell movement and phagocytosis [], as well as muscle contraction. The F-actin capping protein binds in a calcium-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike gelsolin (see IPR007122 from INTERPRO) and severin this protein does not sever actin filaments. The F-actin capping protein is a heterodimer composed of two unrelated subunits: alpha and beta. Neither of the subunits shows sequence similarity to other filament-capping proteins []. The beta subunit is a protein of about 280 amino acid residues whose sequence is well conserved in eukaryotic species [].; GO: 0003779 actin binding, 0030036 actin cytoskeleton organization, 0005737 cytoplasm, 0008290 F-actin capping protein complex; PDB: 3AAE_D 3LK4_Q 2KXP_B 2KZ7_B 3AA1_B 3LK2_B 3AA7_B 3AAA_B 1IZN_B 3AA0_B ....

>KOG3174 consensus F-actin capping protein, beta subunit [Cytoskeleton]

Probab=100.00  E-value=2.4e-113  Score=769.88  Aligned_cols=248  Identities=52%  Similarity=0.915  Sum_probs=237.6

Q ss_pred             ChhHhhhhhcCCcccHHHHHHHHHccCcchhHHHhhcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 025106            1 MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLED   80 (258)
Q Consensus         1 ~d~aLdLlRRlpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~l~d   80 (258)
                      +||||||||||||++||+||++||+|+|+|||||||||||||||++|+++||+||+||||||||||||||||+|+||++|
T Consensus         6 lD~ALDLmRrLpPqqieKnL~nLIdL~P~L~edLLsSVdqplKia~dke~g~~yllcDynrdgDsyRsPwsnsy~pPled   85 (275)
T KOG3174|consen    6 LDCALDLMRRLPPQQIEKNLSNLIDLAPHLCEDLLSSVDQPLKIARDKESGKQYLLCDYNRDGDSYRSPWSNSYDPPLED   85 (275)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHHhchHHHHHHHhhcccceeehhhhhcCCeeeeeecCCCcccccCCCCcccCCcccc
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhhhcCCceeEEEeecCCCCeeEEEEEEecCCCCcCCCCCCCCCccceeeEEEEEee
Q 025106           81 ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAP  160 (258)
Q Consensus        81 g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~gFag~vLiKK~~~~s~~~~~~~~~~G~WDSIHV~EV~~  160 (258)
                      |++||++||+||+.||.+|++||++||||||||||+||++++||||+|||||++++.+.      ..|||||||||||++
T Consensus        86 g~~Psd~lrklei~aN~af~~yrdly~egGvssVylwdld~~gfag~vlikK~~~~~~~------~~g~wdsIhvie~~~  159 (275)
T KOG3174|consen   86 GVYPSDRLRKLEIEANLAFRSYRDLYYEGGVSSVYLWDLDFGGFAGVVLIKKAGDGHKN------IVGCWDSIHVIEVTE  159 (275)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHhHHheecCcceEEEEeccCCCcccceEEeeccCCCCC------cccceeeeEEEEEec
Confidence            99999999999999999999999999999999999999999899999999999988776      679999999999997


Q ss_pred             -cCCceeEEEEeeEEEEEeeeCCCCc-ceeeecceeeeeecccccccc--chhhhhhhHHHHHHHHHHhhhhhhhhccch
Q 025106          161 -EEEGIARYCLTSTVMLSLTTDHESS-GTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTK  236 (258)
Q Consensus       161 -~~~~~~~YklTSTvmL~l~~~~~~~-g~~~LsGsltRq~e~~~~~~~--~Hi~NiG~mIEdmE~~mR~~L~~VYf~Ktk  236 (258)
                       .+++++|||||||+|||+++.+.++ |.|||+|+||||+|++.+|++  .||+|+|+|||+||++||++|++|||||||
T Consensus       160 ~~~~~s~~y~lTSTi~l~l~~~K~~s~~~mnl~g~Ltrq~e~d~~v~~~~tHian~gklve~~et~mr~~l~~iYfgkTk  239 (275)
T KOG3174|consen  160 ETSLRSAHYKLTSTIMLWLSTTKNESLGAMNLGGSLTRQTEKDVAVDDSRTHIANQGKLVEDMETKMRNLLNEIYFGKTK  239 (275)
T ss_pred             ccccceeEEEeeeEEEEEecCCCccchhhhhhhhHhhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence             4578899999999999999887655 999999999999999999988  899999999999999999999999999999


Q ss_pred             HhhcccCCCcccc-ccCCC
Q 025106          237 EMVCTLRPPSEVI-MRLPD  254 (258)
Q Consensus       237 dIv~~lRs~~~~~-~~~~~  254 (258)
                      +|++.+|+++.++ +.+++
T Consensus       240 di~~~~Rs~~~~a~~~~~~  258 (275)
T KOG3174|consen  240 DISNQLRSPQALADAESQD  258 (275)
T ss_pred             HHHhhccchhhhhcccchh
Confidence            9999999999888 65543

>PF01267 F-actin_cap_A: F-actin capping protein alpha subunit; InterPro: IPR002189 This entry represents a component of the WASH complex

Probab=98.48  E-value=1.3e-06  Score=80.52  Aligned_cols=230  Identities=21%  Similarity=0.348  Sum_probs=145.1

Q ss_pred             hhHhhhhhcCCcccHHHHHHHHHccCcc--hh-HHHhhc-----CCCceeeeeecccCceeeecccCCC-CCCCCCCCCC
Q 025106            2 EAAMGLMRRMPPKHSETALSALLSLLPD--HS-SDLLSQ-----VDQPLQVLFDEESGKEFILCEYNRD-ADSYRSPWSN   72 (258)
Q Consensus         2 d~aLdLlRRlpP~~ie~nl~~l~~L~Pd--l~-edLLss-----VDqPLkv~~d~~~~k~yL~CdYNRD-gDSYRSPwSN   72 (258)
                      +.|-+++..=||-++..-+++|..|+++  +. +.+...     ++|-..|..+ ..+..+|.|.||+. ++.|==|=++
T Consensus         4 ~ii~~fl~~aPPGE~~~V~~Dlr~l~~dd~~~~~~i~~a~~~yn~~q~~~v~~~-~~~~~viis~~n~~~~~ry~Dp~~~   82 (271)
T PF01267_consen    4 EIISSFLLQAPPGEFNEVFNDLRTLLGDDSLLKEGIAEAFEQYNEEQFIPVKLP-GSDHKVIISKYNKLGGNRYFDPRSK   82 (271)
T ss_dssp             HHHHHHHHT--TT-HHHHHHHHHHHHT-HHHHHHHSHHHHHHHHHHTTEEE--T-TSSS-EEE-GGGBESTTEEEETTTT
T ss_pred             HHHHHHHHcCCCccHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHCcEEEEeC-CCCcceEEecccccCCCeEEEeccC
Confidence            3466788888999999999999999998  22 222222     4555555543 33578999999999 4444333332


Q ss_pred             C---CCCC------CCCCCCCChHHHHHHHHHHHHHHHHHHhhhcCCceeEEEeecCCC-CeeEEEEEEecCCCCcCCCC
Q 025106           73 K---YHPP------LEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNE-GFVACFLIKKDGSKTAQGRR  142 (258)
Q Consensus        73 k---Y~P~------l~dg~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~-gFag~vLiKK~~~~s~~~~~  142 (258)
                      +   |+.-      .++...|++.+..+-....+++..|.+-+|..|+++||--+.++. .|+-|+.=.|- ++.+    
T Consensus        83 ~~F~~DHl~~~~~d~e~~~~~~~~~e~~R~~l~~~l~~Yv~~hy~~g~~~V~~~~~~~~~~l~i~I~~~k~-n~~N----  157 (271)
T PF01267_consen   83 KSFSVDHLKQKASDVEPYEPPDEELESYRDALDKALEKYVKEHYPSGACGVYPKSEEDKETLVICIVAHKY-NPKN----  157 (271)
T ss_dssp             EEEEEETTTTEEEEEEE-----TSSHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEETTEEEEEEEEEEEEE-EGGG----
T ss_pred             cEEEEeeeccEEccCccccccccchHHHHHHHHHHHHHHHHHhccCceeEEEeccCCCccEEEEEEEeccc-cccc----
Confidence            2   1110      011223455666776888899999999999889999998887742 26666665553 3333    


Q ss_pred             CCCCCccceeeEEEEEeecCCceeEEEEeeEEEEEeeeCCCCcceeeecceeeeeecccccccc--chhhhhhhHHHHHH
Q 025106          143 GHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEME  220 (258)
Q Consensus       143 ~~~~~G~WDSIHV~EV~~~~~~~~~YklTSTvmL~l~~~~~~~g~~~LsGsltRq~e~~~~~~~--~Hi~NiG~mIEdmE  220 (258)
                        .-.|.|-|.=+|.+. .++     .|+.+|-+.+-==.+  |.+.|..+  +..+.+..+++  ....+|=+.|++.|
T Consensus       158 --fwnG~WrS~w~~~~~-~~~-----~l~G~I~V~vHYyEd--GNVqL~~~--k~~~~~~~~~~~~~~a~~iv~~I~~~E  225 (271)
T PF01267_consen  158 --FWNGRWRSEWTVDFS-SSG-----TLSGKIKVQVHYYED--GNVQLNSS--KEVSETVSVSNDEQFASDIVKAIKEAE  225 (271)
T ss_dssp             --TEEEEEEEEEEEEEE-TTE-----EEEEEEEEEEEE-TT--EEEEEEEE--EEEEEEEE--SHHHHHHHHHHHHHHHH
T ss_pred             --ccCceeeEEEEEecC-CCc-----eEEEEEEeeEEEEee--cEEEEEEc--cccceeeccCChhhhHHHHHHHHHHHH
Confidence              357999999999984 222     677888777643333  55655432  33333333333  56788889999999


Q ss_pred             HHHHhhhhhhhhccchHhhcccCCCcccc
Q 025106          221 GKLRNSLDQVYFGKTKEMVCTLRPPSEVI  249 (258)
Q Consensus       221 ~~mR~~L~~VYf~KtkdIv~~lRs~~~~~  249 (258)
                      +++-..|++-|-.=...-+..||..-+.+
T Consensus       226 ~~~q~~L~e~~~~ls~~tFK~LRR~LPVT  254 (271)
T PF01267_consen  226 NKYQTSLNESYNNLSEKTFKALRRQLPVT  254 (271)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHS-SS-TT
T ss_pred             HHHHHHHHHHHHHhhHHHHHHhhhhCCCC
Confidence            99999999999877777788899766554

The WASH complex is present at the surface of endosomes and recruits and activates the Arp2/3 complex to induce actin polymerisation. The WASH complex plays a key role in the fission of tubules that serve as transport intermediates during endosome sorting []. The WASH complex's subunit structure: F-actin-capping protein subunit alpha (CAPZA1, CAPZA2 or CAPZA3), F-actin-capping protein subunit beta (CAPZB), WASH (WASH1, WASH2P, WASH3P, WASH4P, WASH5P or WASH6P), FAM21 (FAM21A, FAM21B or FAM21C), KIAA1033, KIAA0196 (strumpellin) and CCDC53. The actin filament system, a prominent part of the cytoskeleton in eukaryotic cells, is both a static structure and a dynamic network that can undergo rearrangements: it is thought to be involved in processes such as cell movement and phagocytosis [], as well as muscle contraction. The F-actin capping protein binds in a calcium-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike gelsolin and severin this protein does not sever actin filaments. The F-actin capping protein is a heterodimer composed of two unrelated subunits: alpha and beta (see IPR001698 from INTERPRO). Neither of the subunits shows sequence similarity to other filament-capping proteins []. The alpha subunit is a protein of about 268 to 286 amino acid residues whose sequence is well conserved in eukaryotic species [].; GO: 0003779 actin binding, 0030036 actin cytoskeleton organization, 0008290 F-actin capping protein complex; PDB: 1MQ1_D 1MWN_X 2KBM_Y 2KZ7_A 3AAE_C 3AA6_A 3LK4_G 1IZN_A 3AA7_A 3AAA_A ....

>KOG0836 consensus F-actin capping protein, alpha subunit [Cytoskeleton]

Probab=96.44  E-value=0.16  Score=47.91  Aligned_cols=215  Identities=18%  Similarity=0.287  Sum_probs=130.9

Q ss_pred             hHhhhhhcCCcccHHHHHHHHHccCcchh---HHHh-----hcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCC
Q 025106            3 AAMGLMRRMPPKHSETALSALLSLLPDHS---SDLL-----SQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKY   74 (258)
Q Consensus         3 ~aLdLlRRlpP~~ie~nl~~l~~L~Pdl~---edLL-----ssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY   74 (258)
                      .|-++++.=||-.+.+-.++|+.|.-+=.   +...     =.+||=..|.-+-- ..+=|...||+-|++       +|
T Consensus        12 ii~kfi~~APPGEfneVf~Dlr~ll~~d~l~~e~~~~A~~qYn~~~~vpv~i~g~-~~~viIS~~n~lg~~-------rf   83 (282)
T KOG0836|consen   12 IISKFILHAPPGEFNEVFNDLRLLLSNDELLKEAAHEAFAQYNVDQMVPVEIDGG-ANQVIISEYNDLGNN-------RF   83 (282)
T ss_pred             HHHHHHhhCCChHHHHHHHHHHHHhcchhHHHHHHHHHHHHhchhcceeEecCCC-CCceEEecccccCcc-------ee
Confidence            46788999999999999999999874311   1111     24565433333321 257899999999963       33


Q ss_pred             CCCCCC---------------CCCC--ChHHHHHHHHHHHHHHHHHHhhhcCCceeEEEeecCCC--CeeEEEEEEecCC
Q 025106           75 HPPLED---------------ALYP--PAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNE--GFVACFLIKKDGS  135 (258)
Q Consensus        75 ~P~l~d---------------g~~P--S~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~--gFag~vLiKK~~~  135 (258)
                      +-|-..               .+.+  ...........-..-..|..-+|-||+|.| +.-.++.  .|-.|+-=.+ -+
T Consensus        84 ~Dp~~k~sFk~dhl~kea~d~qp~~~~~~~~E~~r~~l~~~l~~y~~~hy~~~~t~~-vkk~dg~~~~l~icIesh~-y~  161 (282)
T KOG0836|consen   84 LDPVNKKSFKYDHLRKEAEDVQPYEAEINIIEIWRYALDAQLKKYVSDHYPKGVTFV-VKKSDGEQETLTICIESHQ-YQ  161 (282)
T ss_pred             cchhhceeeeHHHHHHHhccCCCcchhhhhhHHHHHHHHHHHHHHHHhccCCCceEE-EeccCCcceEEEEEEeecc-cC
Confidence            333221               1111  111222333455567789999999999988 7766632  2444443222 22


Q ss_pred             CCcCCCCCCCCCccceeeEEEEEeec---CCc---eeEEEEeeEEEEEeeeCCCCcceeeecceeeeeeccccccccchh
Q 025106          136 KTAQGRRGHLEEGAWDAIHVIEVAPE---EEG---IARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEGHL  209 (258)
Q Consensus       136 ~s~~~~~~~~~~G~WDSIHV~EV~~~---~~~---~~~YklTSTvmL~l~~~~~~~g~~~LsGsltRq~e~~~~~~~~Hi  209 (258)
                            +.+.=.|.|.|+-.|.|++.   .|+   ++||-=..-|-|.  ..++-.-.+++      +.+..      -.
T Consensus       162 ------pkNfwNG~WRS~w~~~v~~~~~l~G~i~vqvHYyEdGNV~l~--s~Kd~qds~~v------sn~~q------~a  221 (282)
T KOG0836|consen  162 ------PKNFWNGRWRSEWNYDVQPTTELKGRIKVQVHYYEDGNVQLV--SSKDIQDSLTV------SNEVQ------TA  221 (282)
T ss_pred             ------cccccCCceeeeeeeccCchheeeeEEEEEEEEEecCcEEEE--ecCcchhhhee------echHH------HH
Confidence                  22446799999999999851   222   2777666655544  33321112222      22211      22


Q ss_pred             hhhhhHHHHHHHHHHhhhhhhhhccchHhhcccCCCcc
Q 025106          210 CNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLRPPSE  247 (258)
Q Consensus       210 ~NiG~mIEdmE~~mR~~L~~VYf~KtkdIv~~lRs~~~  247 (258)
                      .-+=++||+.|+..-+.|++-|+.=.-.-+..||.--+
T Consensus       222 ~e~~~iI~~~Eneyq~ai~e~yq~lsD~tFKaLRRqLP  259 (282)
T KOG0836|consen  222 KEFIKIIEEAENEYQAAISENYQTLSDTTFKALRRQLP  259 (282)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHhhCC
Confidence            34567899999999999999999766666677775433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	258
2kxp_B	270	Solution Nmr Structure Of V-1 Bound To Capping Prot		4e-64
1izn_B	277	Crystal Structure Of Actin Filament Capping Protein		4e-64
3aa0_B	244	Crystal Structure Of Actin Capping Protein In Compl		7e-64
3lk2_B	243	Crystal Structure Of Capz Bound To The Uncapping Mo		4e-63
4akr_B	290	Crystal Structure Of The Cytoplasmic Actin Capping		1e-62

>pdb|2KXP|B Chain B, Solution Nmr Structure Of V-1 Bound To Capping Protein (Cp) Length = 270

Iteration: 1
 Score =  241 bits (614), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 125/260 (48%), Positives = 168/260 (64%), Gaps = 18/260 (6%)
Query: 1   MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct: 5   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 64
Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 65  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 124
Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 125 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 175
Query: 178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
           L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct: 176 LQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKT 235
Query: 236 KEMVCTLRPPSEVIMRLPDS 255
           K++V  LR     I  +PD+
Sbjct: 236 KDIVNGLRS----IDAIPDN 251

>pdb|1IZN|B Chain B, Crystal Structure Of Actin Filament Capping Protein Capz Length = 277

Iteration: 1
 Score =  240 bits (613), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 122/248 (49%), Positives = 163/248 (65%), Gaps = 14/248 (5%)
Query: 1   MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65
Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125
Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176
Query: 178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
           L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct: 177 LQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKT 236
Query: 236 KEMVCTLR 243
           K++V  LR
Sbjct: 237 KDIVNGLR 244

>pdb|3AA0|B Chain B, Crystal Structure Of Actin Capping Protein In Complex With The Cp- Binding Motif Derived From Carmil Length = 244

Iteration: 1
 Score =  239 bits (611), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 122/248 (49%), Positives = 163/248 (65%), Gaps = 14/248 (5%)
Query: 1   MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65
Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125
Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176
Query: 178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
           L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct: 177 LQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKT 236
Query: 236 KEMVCTLR 243
           K++V  LR
Sbjct: 237 KDIVNGLR 244

>pdb|3LK2|B Chain B, Crystal Structure Of Capz Bound To The Uncapping Motif From Carmil Length = 243

Iteration: 1
 Score =  238 bits (606), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 121/247 (48%), Positives = 162/247 (65%), Gaps = 14/247 (5%)
Query: 1   MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E                    VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65
Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125
Query: 121 NEGFVACFLIKK--DGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLS 177
           + GF    LIKK  DGSK  +        G WD+IHV+EV  +  G  A Y LTSTVML 
Sbjct: 126 H-GFAGVILIKKAGDGSKKIK--------GCWDSIHVVEVQEKSSGRTAHYKLTSTVMLW 176
Query: 178 LTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKT 235
           L T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKT
Sbjct: 177 LQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKT 236
Query: 236 KEMVCTL 242
           K++V  L
Sbjct: 237 KDIVNGL 243

>pdb|4AKR|B Chain B, Crystal Structure Of The Cytoplasmic Actin Capping Protein Cap32_34 From Dictyostelium Discoideum Length = 290

Iteration: 1
 Score =  236 bits (601), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 117/246 (47%), Positives = 162/246 (65%), Gaps = 8/246 (3%)
Query: 1   MEAAMGLMRRMPPKHSETXXXXXXXXXXXXXXXXXXQVDQPLQVLFDEESGKEFILCEYN 60
           +   + LMRR+PP   E                    +DQPL+V +D  S K+++LC+YN
Sbjct: 24  LSCCLDLMRRLPPSQIEDNLAGLLDLVPDLTEDLLSSIDQPLKVAYDAVSKKDYLLCDYN 83
Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWE-D 119
           RDADSYRSPWSNKY PPL  A YP ++LR +E++ANE+F IY + Y+EGG+SSVY W+ D
Sbjct: 84  RDADSYRSPWSNKYDPPLSGACYPSSKLRDIEVQANEIFEIYLNLYFEGGVSSVYCWDLD 143
Query: 120 DNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLT 179
           DN  F A  L+KK      Q ++G    G WD+IHV+EV   ++  A Y LTSTVMLS+ 
Sbjct: 144 DN--FAAVVLMKK---TQDQSKKGQPMRGTWDSIHVVEVKLGKKDKAVYKLTSTVMLSIE 198
Query: 180 TDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKE 237
           TD++++G  +L+GS+ RQ   + + +E   H  N+GKM+E+ME KLR +L+ +YFGKTKE
Sbjct: 199 TDNDNTGKVNLAGSLTRQDEKEYTFNEVDTHCVNIGKMVEDMESKLRQTLETIYFGKTKE 258
Query: 238 MVCTLR 243
           +V TLR
Sbjct: 259 VVNTLR 264

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	258
4akr_B	290	F-actin-capping protein subunit beta; actin-bindin	1e-120
3aa0_B	244	F-actin-capping protein subunit beta isoforms 1 A;	1e-120
3lk4_B	277	F-actin-capping protein subunit beta isoforms 1 an	1e-119
4akr_A	281	F-actin-capping protein subunit alpha; actin-bindi	1e-11

>4akr_B F-actin-capping protein subunit beta; actin-binding protein; 2.20A {Dictyostelium discoideum} Length = 290

 Score =  344 bits (884), Expect = e-120
 Identities = 125/245 (51%), Positives = 174/245 (71%), Gaps = 6/245 (2%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           +   + LMRR+PP   E  L+ LL L+PD + DLLS +DQPL+V +D  S K+++LC+YN
Sbjct: 24  LSCCLDLMRRLPPSQIEDNLAGLLDLVPDLTEDLLSSIDQPLKVAYDAVSKKDYLLCDYN 83

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RDADSYRSPWSNKY PPL  A YP ++LR +E++ANE+F IY + Y+EGG+SSVY W+ D
Sbjct: 84  RDADSYRSPWSNKYDPPLSGACYPSSKLRDIEVQANEIFEIYLNLYFEGGVSSVYCWDLD 143

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTT 180
            + F A  L+KK      Q ++G    G WD+IHV+EV   ++  A Y LTSTVMLS+ T
Sbjct: 144 -DNFAAVVLMKKTQD---QSKKGQPMRGTWDSIHVVEVKLGKKDKAVYKLTSTVMLSIET 199

Query: 181 DHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEM 238
           D++++G  +L+GS+ RQ   + + +E   H  N+GKM+E+ME KLR +L+ +YFGKTKE+
Sbjct: 200 DNDNTGKVNLAGSLTRQDEKEYTFNEVDTHCVNIGKMVEDMESKLRQTLETIYFGKTKEV 259

Query: 239 VCTLR 243
           V TLR
Sbjct: 260 VNTLR 264

>3aa0_B F-actin-capping protein subunit beta isoforms 1 A; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 3aa1_B* 3aa6_B 3aa7_B* 2kxp_B 3lk2_B Length = 244

 Score =  342 bits (878), Expect = e-120
 Identities = 128/246 (52%), Positives = 172/246 (69%), Gaps = 10/246 (4%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLT 179
             GF    LIKK G  + +       +G WD+IHV+EV  +  G  A Y LTSTVML L 
Sbjct: 126 -HGFAGVILIKKAGDGSKK------IKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQ 178

Query: 180 TDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKTKE 237
           T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKTK+
Sbjct: 179 TNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKD 238

Query: 238 MVCTLR 243
           +V  LR
Sbjct: 239 IVNGLR 244

>3lk4_B F-actin-capping protein subunit beta isoforms 1 and 2; CAPZ, CD2AP, actin filaments, uncapping, actin-filament regulators, protein-protein comple, actin capping, actin- binding; 1.99A {Gallus gallus} PDB: 2kz7_B 3aaa_B 3aae_B 3lk3_B 1izn_B Length = 277

 Score =  341 bits (876), Expect = e-119
 Identities = 128/246 (52%), Positives = 172/246 (69%), Gaps = 10/246 (4%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 6   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 66  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 125

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLT 179
             GF    LIKK G  + +       +G WD+IHV+EV  +  G  A Y LTSTVML L 
Sbjct: 126 -HGFAGVILIKKAGDGSKK------IKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQ 178

Query: 180 TDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKTKE 237
           T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKTK+
Sbjct: 179 TNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKD 238

Query: 238 MVCTLR 243
           +V  LR
Sbjct: 239 IVNGLR 244

>4akr_A F-actin-capping protein subunit alpha; actin-binding protein; 2.20A {Dictyostelium discoideum} Length = 281

 Score = 62.4 bits (151), Expect = 1e-11
 Identities = 41/265 (15%), Positives = 80/265 (30%), Gaps = 39/265 (14%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHS------SDLLSQ--VDQPLQVLFDEESGK 52
           ++ A   +   PP      +S + +LLP  S           +    Q + V   + S  
Sbjct: 8   VQIATNFLLNAPPCEFMEVVSDVRALLPSESLLNASAGSTFREYNTSQMVSV---QTSKG 64

Query: 53  EFILCEYNRDADS----YRSPWSNKY----------HPPLEDALYPPAELRKLEIEANEV 98
             ++ +    +++     ++     Y               +      + R    E    
Sbjct: 65  SALITKEGEISNNEYLDPKNKQVITYDHIKQEVTGERSASGEIEQDIEQYRAAFDEE--- 121

Query: 99  FAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEV 158
              Y ++YY  G+S+VY  +      +    I     K      G      W ++     
Sbjct: 122 ATKYCNEYYPNGVSAVYGTKVSEGIKIT-VCISTCIYKPNAFYSGR-----WRSVWTCTF 175

Query: 159 APEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEE 218
            P         +TS   + +   +   G   L+   ++Q     + ++    N  K I +
Sbjct: 176 KPGSGN-----VTSNGKVQVNVHYFEDGNVQLNTVTQKQTTSPSADAQSTAVNAFKAIGK 230

Query: 219 MEGKLRNSLDQVYFGKTKEMVCTLR 243
            E  L  +LD  Y          LR
Sbjct: 231 AELNLHTALDNNYSTMGDTTFKALR 255

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	258
3lk4_B	277	F-actin-capping protein subunit beta isoforms 1 an	100.0
4akr_B	290	F-actin-capping protein subunit beta; actin-bindin	100.0
3aa0_B	244	F-actin-capping protein subunit beta isoforms 1 A;	100.0
3aa0_A	286	F-actin-capping protein subunit alpha-1; actin cap	100.0
4akr_A	281	F-actin-capping protein subunit alpha; actin-bindi	98.84

>3lk4_B F-actin-capping protein subunit beta isoforms 1 and 2; CAPZ, CD2AP, actin filaments, uncapping, actin-filament regulators, protein-protein comple, actin capping, actin- binding; 1.99A {Gallus gallus} PDB: 2kz7_B 3aaa_B 3aae_B 3lk3_B 1izn_B

Probab=100.00  E-value=7.2e-127  Score=869.78  Aligned_cols=242  Identities=52%  Similarity=0.943  Sum_probs=227.1

Q ss_pred             ChhHhhhhhcCCcccHHHHHHHHHccCcchhHHHhhcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 025106            1 MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLED   80 (258)
Q Consensus         1 ~d~aLdLlRRlpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~l~d   80 (258)
                      +||||||||||||++||+||++||+|+|+||+||||+|||||||++|+++||+|||||||||||||||||||+|+||++|
T Consensus         6 ~daaLdLlRRLpP~~ie~nl~~l~~L~P~L~edLLssVDqPLki~~d~~~~k~yL~CDYNRDgDSYRSPwSNkY~Ppl~d   85 (277)
T 3lk4_B            6 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLED   85 (277)
T ss_dssp             HHHHHHHHTTSCGGGHHHHHHHHHHHCGGGHHHHHHHSCCCCEEEEETTTTEEEEECGGGEETTEEECTTTCCEESCCSS
T ss_pred             HHHHHHHHhhCCHHHHHHHHHHHHhhChHhHHHHHHhCCcCceEeEccccCCeeEeecccCCCccccCCCcCCcCCCCcC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhhhcCCceeEEEeecCCCCeeEEEEEEecCCCCcCCCCCCCCCccceeeEEEEEee
Q 025106           81 ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAP  160 (258)
Q Consensus        81 g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~gFag~vLiKK~~~~s~~~~~~~~~~G~WDSIHV~EV~~  160 (258)
                      |++||++||+||++||++||+||+||||||||||||||+|+ ||||||||||+++++++      .+|+|||||||||++
T Consensus        86 g~~PS~~LRkLEi~aN~aFd~Yr~lYYeGGvSSVYlWdld~-gFagvvLiKK~~~~~~~------~~G~WDSIHV~Ev~~  158 (277)
T 3lk4_B           86 GAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDH-GFAGVILIKKAGDGSKK------IKGCWDSIHVVEVQE  158 (277)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEEEEETT-EEEEEEEEEEECCCGGG------EEEEEEEEEEEEEEC
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCeeEEEEEecCC-CeEEEEEEEecCCCccc------cccceeeeEEEEEee
Confidence            99999999999999999999999999999999999999995 79999999999887764      689999999999985


Q ss_pred             -cCCceeEEEEeeEEEEEeeeCCCCcceeeecceeeeeecccccccc--chhhhhhhHHHHHHHHHHhhhhhhhhccchH
Q 025106          161 -EEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKE  237 (258)
Q Consensus       161 -~~~~~~~YklTSTvmL~l~~~~~~~g~~~LsGsltRq~e~~~~~~~--~Hi~NiG~mIEdmE~~mR~~L~~VYf~Ktkd  237 (258)
                       .+++++||||||||||+|++++++.|.|+|||+||||+|+++++++  +||+|||+|||+||++||++|++||||||||
T Consensus       159 ~~~~~~~~YklTSTVmL~l~~~~~~~g~~~LsGsltRq~e~~~~v~~~~~Hi~NiG~mVEdmE~~mRn~L~~VYFgKtkd  238 (277)
T 3lk4_B          159 KSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKD  238 (277)
T ss_dssp             ----CEEEEEEEEEEEEEEEECCSSSSEEEEEEEEEEEEEEEEECSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             ccCCceeEEEEeEEEEEEEEcCCCCcceEeeceeeeeeccccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence             3678899999999999999998889999999999999999999988  9999999999999999999999999999999


Q ss_pred             hhcccCCCcccc
Q 025106          238 MVCTLRPPSEVI  249 (258)
Q Consensus       238 Iv~~lRs~~~~~  249 (258)
                      ||++|||+.+++
T Consensus       239 Iv~~lRs~~~~~  250 (277)
T 3lk4_B          239 IVNGLRSIDAIP  250 (277)
T ss_dssp             HHHTTC------
T ss_pred             HHHHhhcCCCch
Confidence            999999999887

>4akr_B F-actin-capping protein subunit beta; actin-binding protein; 2.20A {Dictyostelium discoideum}

Probab=100.00  E-value=4.9e-126  Score=868.16  Aligned_cols=244  Identities=51%  Similarity=0.911  Sum_probs=230.5

Q ss_pred             ChhHhhhhhcCCcccHHHHHHHHHccCcchhHHHhhcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 025106            1 MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLED   80 (258)
Q Consensus         1 ~d~aLdLlRRlpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~l~d   80 (258)
                      +||||||||||||++||+||++||+|+|+||+||||+|||||||++|+++||+|||||||||||||||||||||+||++|
T Consensus        24 ~daaLdLlRRLpP~~ie~nL~~Li~L~Pdl~edLLssVDqPLki~~d~~~~k~yL~CDYNRDGDSYRSPwSNkY~Ppl~d  103 (290)
T 4akr_B           24 LSCCLDLMRRLPPSQIEDNLAGLLDLVPDLTEDLLSSIDQPLKVAYDAVSKKDYLLCDYNRDADSYRSPWSNKYDPPLSG  103 (290)
T ss_dssp             HHHHHHHHHHSCGGGHHHHHHHHHHHCGGGHHHHHHHCCCCCEEEEETTTTEEEEECGGGEETTEEECTTTCCEESCCSS
T ss_pred             HHHHHHHHhhCCHHHHHHHHHHHHhhChHhHHHHHHhCCCcceEeEccccCCeEEeecccCCCccccCCCCCCcCCCCCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhhhcCCceeEEEeecCCCCeeEEEEEEecCCCCcCCCCCCCCCccceeeEEEEEee
Q 025106           81 ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAP  160 (258)
Q Consensus        81 g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~gFag~vLiKK~~~~s~~~~~~~~~~G~WDSIHV~EV~~  160 (258)
                      |++||++||+||++||++||+||+||||||||||||||+|+ ||||||||||+++++++|   +..+|+|||||||||++
T Consensus       104 g~~PS~~LRkLEi~aN~aFd~Yr~lYYeGGvSSVYlWdld~-gFagvvLiKK~~~~~~~g---~~~~G~WDSIHV~Ev~~  179 (290)
T 4akr_B          104 ACYPSSKLRDIEVQANEIFEIYLNLYFEGGVSSVYCWDLDD-NFAAVVLMKKTQDQSKKG---QPMRGTWDSIHVVEVKL  179 (290)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEEEEETT-EEEEEEEEEEEEC---------CEEEEEEEEEEEEEEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhcCCeeEEEEEecCC-CceEEEEEEeccCccccc---cCCCCceeeeEEEEEee
Confidence            99999999999999999999999999999999999999995 899999999998887531   23789999999999984


Q ss_pred             cCCce-eEEEEeeEEEEEeeeCCCCcceeeecceeeeeecccccccc--chhhhhhhHHHHHHHHHHhhhhhhhhccchH
Q 025106          161 EEEGI-ARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKE  237 (258)
Q Consensus       161 ~~~~~-~~YklTSTvmL~l~~~~~~~g~~~LsGsltRq~e~~~~~~~--~Hi~NiG~mIEdmE~~mR~~L~~VYf~Ktkd  237 (258)
                       ++++ +||||||||||+|++++++.|.|+||||||||+|+++++++  +||+|||+|||+||++||++|++||||||||
T Consensus       180 -~~~~~a~YklTSTVmL~L~t~~~~~g~~~LsGslTRq~e~~~~v~d~~~HI~NiG~mVEdmE~kmRn~L~eVYFgKtkd  258 (290)
T 4akr_B          180 -GKKDKAVYKLTSTVMLSIETDNDNTGKVNLAGSLTRQDEKEYTFNEVDTHCVNIGKMVEDMESKLRQTLETIYFGKTKE  258 (290)
T ss_dssp             -ETTTEEEEEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             -cCCCceEEEEeEEEEEEEecCCCCCceEeeeeeeeeecccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence             4555 99999999999999988889999999999999999999988  9999999999999999999999999999999


Q ss_pred             hhcccCCCcccc
Q 025106          238 MVCTLRPPSEVI  249 (258)
Q Consensus       238 Iv~~lRs~~~~~  249 (258)
                      ||++|||+.+++
T Consensus       259 Iv~~lRs~~~~~  270 (290)
T 4akr_B          259 VVNTLRNATGNS  270 (290)
T ss_dssp             HHHHHSCTTCCC
T ss_pred             HHHhhccCCcch
Confidence            999999999887

>3aa0_B F-actin-capping protein subunit beta isoforms 1 A; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 3aa1_B* 3aa6_B 3aa7_B* 2kxp_B 3lk2_B

Probab=100.00  E-value=2.2e-124  Score=842.02  Aligned_cols=236  Identities=54%  Similarity=0.969  Sum_probs=228.1

Q ss_pred             ChhHhhhhhcCCcccHHHHHHHHHccCcchhHHHhhcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 025106            1 MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLED   80 (258)
Q Consensus         1 ~d~aLdLlRRlpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~l~d   80 (258)
                      +||||||||||||++||+||++||+|+|+||+||||+|||||||++|+++||+||+||||||||||||||||+||||++|
T Consensus         6 ~d~aLdL~RRLpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLki~~d~~~~k~yL~CdYNRDgDSYRSPwSN~Y~P~~~d   85 (244)
T 3aa0_B            6 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLED   85 (244)
T ss_dssp             HHHHHHHHTTSCGGGHHHHHHHHHHHCGGGHHHHHHHSCCCCEEEEETTTTEEEEECGGGEETTEEECTTTCCEESCCSS
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHHhChHHHHHHHhccCCcceEeeccccCCeeeeecccCCCccccCCCCCCcCCCCCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhhhcCCceeEEEeecCCCCeeEEEEEEecCCCCcCCCCCCCCCccceeeEEEEEee
Q 025106           81 ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAP  160 (258)
Q Consensus        81 g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~gFag~vLiKK~~~~s~~~~~~~~~~G~WDSIHV~EV~~  160 (258)
                      |++||++||+||++||++||+||+||||||||||||||+| +||||||||||+++++++      .+|+|||||||||++
T Consensus        86 g~~PS~~LR~LEi~aN~~Fd~Yr~lYyeGGvSSVYlWdld-~gFag~vLiKK~~~~~~~------~~G~WdSiHV~Ev~~  158 (244)
T 3aa0_B           86 GAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD-HGFAGVILIKKAGDGSKK------IKGCWDSIHVVEVQE  158 (244)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEEEEET-TEEEEEEEEEEECCTTSS------EEEEEEEEEEEEEEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhCCCcceEEEEecC-CCceEEEEEEeccCcccc------cccceeeeeEEEEee
Confidence            9999999999999999999999999999999999999999 589999999999887655      679999999999986


Q ss_pred             c-CCceeEEEEeeEEEEEeeeCCCCcceeeecceeeeeecccccccc--chhhhhhhHHHHHHHHHHhhhhhhhhccchH
Q 025106          161 E-EEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKE  237 (258)
Q Consensus       161 ~-~~~~~~YklTSTvmL~l~~~~~~~g~~~LsGsltRq~e~~~~~~~--~Hi~NiG~mIEdmE~~mR~~L~~VYf~Ktkd  237 (258)
                      . ++++|||||||||||+|++++++.|.|+|||+||||+|+++++.+  +||+|||+|||+||++||++|++||||||||
T Consensus       159 ~~s~~~a~YklTSTvml~l~~~~~~~g~~~LsGsltRq~E~~~~v~~~~~Hi~NiG~mIEdmE~~~R~~L~~VYf~Ktkd  238 (244)
T 3aa0_B          159 KSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKD  238 (244)
T ss_dssp             CTTSSEEEEEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEEEECSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             ccCCCceeEEEeeEEEEEeccCCCCcccEecceeeeehhhcccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence            4 568899999999999999998889999999999999999999988  8999999999999999999999999999999


Q ss_pred             hhcccC
Q 025106          238 MVCTLR  243 (258)
Q Consensus       238 Iv~~lR  243 (258)
                      ||++||
T Consensus       239 iv~~lR  244 (244)
T 3aa0_B          239 IVNGLR  244 (244)
T ss_dssp             HHHHHC
T ss_pred             HHHhhC
Confidence            999998

>3aa0_A F-actin-capping protein subunit alpha-1; actin capping protein, barbed END regulation, carmil family conformational change; 1.70A {Gallus gallus} PDB: 2kz7_A 1izn_A 3aa1_A* 3aa6_A 3aa7_A* 3aaa_A 3aae_A 3lk2_A 3lk3_A 3lk4_A 2kxp_A

Probab=100.00  E-value=2e-57  Score=414.60  Aligned_cols=230  Identities=16%  Similarity=0.264  Sum_probs=207.2

Q ss_pred             ChhHhhhhhcCCcccHHHHHHHHHccCcc---hhHHHhhcC-----CC--ceeeeeecccCceeeecccCCCC-CCCCCC
Q 025106            1 MEAAMGLMRRMPPKHSETALSALLSLLPD---HSSDLLSQV-----DQ--PLQVLFDEESGKEFILCEYNRDA-DSYRSP   69 (258)
Q Consensus         1 ~d~aLdLlRRlpP~~ie~nl~~l~~L~Pd---l~edLLssV-----Dq--PLkv~~d~~~~k~yL~CdYNRDg-DSYRSP   69 (258)
                      +++|++||||+||.++++++++|+.|+|+   |.++|++++     ||  ||+|   +.++++||+|+||||| ++|+.|
T Consensus        14 ~~ia~~ll~~aPPge~~~v~~Dl~~L~~dd~ll~~~l~~a~~~yn~dq~~pl~v---~~~~~~~li~~yn~~~~~~Y~dp   90 (286)
T 3aa0_A           14 VRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKI---EGYDDQVLITEHGDLGNGRFLDP   90 (286)
T ss_dssp             HHHHHHHHHTCCTTCHHHHHHHHHHHHCCHHHHHHHTHHHHHHHHHHTTCEECC---TTSSSCEECCGGGEEETTEEEET
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcceeEEe---cCCCCcEEEEeccccCCCceeCc
Confidence            37899999999999999999999999998   889999999     99  9999   6788999999999998 899999


Q ss_pred             CCCCCC---CC---CCC--CCCCChHHHHHHHHHHHHHHHHHHhhhcCCceeEEEeecCC-CCeeEEEEEEecCCCCcCC
Q 025106           70 WSNKYH---PP---LED--ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDN-EGFVACFLIKKDGSKTAQG  140 (258)
Q Consensus        70 wSNkY~---P~---l~d--g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~-~gFag~vLiKK~~~~s~~~  140 (258)
                      ||++|+   |.   ..|  +..||+.||++|+++|++|+.|+++||+||+||||+||+|+ ++||+||++||- ++.   
T Consensus        91 ~s~~~f~~Dh~~~~~~d~~~~~ps~~l~~~r~~~~~~l~~Y~~~~Y~~g~~sVY~~d~e~~~~~a~~I~~~k~-~~~---  166 (286)
T 3aa0_A           91 RNKISFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQF-QPK---  166 (286)
T ss_dssp             TTTEEEEEETTTTEEEEEEECCCCCTTHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEETTEEEEEEEEEEEEE-EGG---
T ss_pred             ccCceEEeecccceeccCCCCCCchhhHHHHHHHHHHHHHHHHHHcCCCceEEEecccCCCceEEEEEEEecc-CCc---
Confidence            999987   64   233  45899999999999999999999999999999999999885 269999999995 322   


Q ss_pred             CCCCCCCccceeeEEEEEeecCCceeEEEEeeEEEEEeeeCCCCcceeeecceeeeeecccccccc--chhhhhhhHHHH
Q 025106          141 RRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEE  218 (258)
Q Consensus       141 ~~~~~~~G~WDSIHV~EV~~~~~~~~~YklTSTvmL~l~~~~~~~g~~~LsGsltRq~e~~~~~~~--~Hi~NiG~mIEd  218 (258)
                         +.-.|+|+|||||||.+ .    .|+||++|++.+.--.+  |.+.|.+  +||.++++++.+  .|+.|||+|||+
T Consensus       167 ---nfw~G~W~Si~~~~v~~-~----~~~l~G~i~v~vHY~Ed--GNV~L~~--~k~~~~~~~~~~~~~~a~~i~~~Ie~  234 (286)
T 3aa0_A          167 ---NFWNGRWRSEWKFTITP-P----TAQVAAVLKIQVHYYED--GNVQLVS--HKDIQDSVQVSSDVQTAKEFIKIIEN  234 (286)
T ss_dssp             ---GTEEEEEEEEEEEEEET-T----EEEEEEEEEEEEEECTT--EEEEEEE--EEEEEEEEECCSHHHHHHHHHHHHHH
T ss_pred             ---cccCceeeeEEEEEecc-c----cceEEEEEEEEEEEecC--ceEEEee--ccccccccccCChHHHHHHHHHHHHH
Confidence               23679999999999983 1    59999999999977655  8899998  899999998877  899999999999


Q ss_pred             HHHHHHhhhhhhhhccchHhhcccCCCcccc
Q 025106          219 MEGKLRNSLDQVYFGKTKEMVCTLRPPSEVI  249 (258)
Q Consensus       219 mE~~mR~~L~~VYf~KtkdIv~~lRs~~~~~  249 (258)
                      ||+++|+.|+++||+|++++++.||...+++
T Consensus       235 ~E~~~~~~L~e~y~~ls~~~fk~LRR~LPvt  265 (286)
T 3aa0_A          235 AENEYQTAISENYQTMSDTTFKALRRQLPVT  265 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHCCSSCTT
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHhccCCcc
Confidence            9999999999999999999999999987775

>4akr_A F-actin-capping protein subunit alpha; actin-binding protein; 2.20A {Dictyostelium discoideum}

Probab=98.84  E-value=4.9e-08  Score=89.32  Aligned_cols=220  Identities=18%  Similarity=0.241  Sum_probs=150.7

Q ss_pred             HhhhhhcCCcccHHHHHHHHHccCcc---hhHHHhhcC-----CC--ceeeeeecccCceeeecccCCCCCCCCCCCCCC
Q 025106            4 AMGLMRRMPPKHSETALSALLSLLPD---HSSDLLSQV-----DQ--PLQVLFDEESGKEFILCEYNRDADSYRSPWSNK   73 (258)
Q Consensus         4 aLdLlRRlpP~~ie~nl~~l~~L~Pd---l~edLLssV-----Dq--PLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNk   73 (258)
                      |-+++..=||-++.+-+++|..|.++   +-+.+...+     +|  |+++-     |.+.|.|.||+-|+       |+
T Consensus        11 ~~~fl~~aPPGE~~eV~~Dlr~l~~~d~~~~~~~~~a~~~Yn~~q~~~v~~~-----g~~viis~~n~l~~-------~r   78 (281)
T 4akr_A           11 ATNFLLNAPPCEFMEVVSDVRALLPSESLLNASAGSTFREYNTSQMVSVQTS-----KGSALITKEGEISN-------NE   78 (281)
T ss_dssp             HHHHHHTCCTTCHHHHHHHHHTTCSCTTTTTTTHHHHHHHHHHHHTCEEEET-----TEEEECCSTTEEET-------TE
T ss_pred             HHHHHHcCCCchHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHccEEEEeC-----CCcEEEeeccccCC-------Ce
Confidence            66788888999999999999999975   333333222     22  55442     33499999998665       45


Q ss_pred             CCCCCC--------------C--CCC--CChHHHHHHHHHHHHHHHHHHhhhcCCceeEEEeecCC-CCeeEEEEEEecC
Q 025106           74 YHPPLE--------------D--ALY--PPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDN-EGFVACFLIKKDG  134 (258)
Q Consensus        74 Y~P~l~--------------d--g~~--PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~-~gFag~vLiKK~~  134 (258)
                      |+-|-.              |  ..-  |.+.+.++=.....++..|.+-+|-+|+++||-=..++ ..++.|+.=.|- 
T Consensus        79 y~Dp~~k~sF~~DHl~~~a~d~~~~~~~~~~~~e~~R~al~~~l~~Yv~~hYp~g~~~Vy~~~~~~~~~l~i~I~~~k~-  157 (281)
T 4akr_A           79 YLDPKNKQVITYDHIKQEVTGERSASGEIEQDIEQYRAAFDEEATKYCNEYYPNGVSAVYGTKVSEGIKITVCISTCIY-  157 (281)
T ss_dssp             EEEGGGTEEEEEETTTTEEEEEEECSSCSCGGGHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEEEEEE-
T ss_pred             EEccCCCeEEEEeccCCEEcCcccccccCccchHHHHHHHHHHHHHHHHhhCCCCcEEEecccCCCCcEEEEEEEeCcc-
Confidence            543221              0  111  44567777788999999999999999999999755542 126655554443 


Q ss_pred             CCCcCCCCCCCCCccceeeEEEEEeecCCceeEEEEeeEEEEEeeeCCCCcceeeecceeeeeecccccccc--chhhhh
Q 025106          135 SKTAQGRRGHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNM  212 (258)
Q Consensus       135 ~~s~~~~~~~~~~G~WDSIHV~EV~~~~~~~~~YklTSTvmL~l~~~~~~~g~~~LsGsltRq~e~~~~~~~--~Hi~Ni  212 (258)
                      ++.+      .-.|.|.|.=.|.|.+.++   +-.++.+|-+.+--=.+  |.+.|..+  +..+.+.++++  .--.+|
T Consensus       158 np~N------FwnGrWrS~w~~~~~~~~~---~l~~~G~I~V~vHYyED--GNVqL~s~--k~~~~s~~~~~~~~~a~~i  224 (281)
T 4akr_A          158 KPNA------FYSGRWRSVWTCTFKPGSG---NVTSNGKVQVNVHYFED--GNVQLNTV--TQKQTTSPSADAQSTAVNA  224 (281)
T ss_dssp             EGGG------TEEEEEEEEEEEEECTTSS---EEEEEEEEEEEEEECSS--EEEEEEEE--EEEEEEEECCSHHHHHHHH
T ss_pred             Cccc------ccCCceEEEEEEEecCCCC---eEEECCEEEEEEEEeec--ceEEEEec--cccccccccCCchhhHHHH
Confidence            3322      3569999999999874332   33333877776643333  55655433  33333444443  456689


Q ss_pred             hhHHHHHHHHHHhhhhhhhhccchHhhcccCCCcccc
Q 025106          213 GKMIEEMEGKLRNSLDQVYFGKTKEMVCTLRPPSEVI  249 (258)
Q Consensus       213 G~mIEdmE~~mR~~L~~VYf~KtkdIv~~lRs~~~~~  249 (258)
                      -++|++.|+++...|++-|..-....+..||..-++.
T Consensus       225 v~~I~~~E~~~q~~l~~~~~~ls~~tfK~LRR~LPvT  261 (281)
T 4akr_A          225 FKAIGKAELNLHTALDNNYSTMGDTTFKALRRALPIN  261 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCSSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCHHHHHHhhccCCCC
Confidence            9999999999999999999999999999999776655

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	258
d1iznb_	270	e.43.1.2 (B:) Capz beta-1 subunit {Chicken (Gallus	1e-125

>d1iznb_ e.43.1.2 (B:) Capz beta-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]} Length = 270

class: Multi-domain proteins (alpha and beta)
fold: Subunits of heterodimeric actin filament capping protein Capz
superfamily: Subunits of heterodimeric actin filament capping protein Capz
family: Capz beta-1 subunit
domain: Capz beta-1 subunit
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  355 bits (914), Expect = e-125
 Identities = 128/246 (52%), Positives = 173/246 (70%), Gaps = 10/246 (4%)

Query: 1   MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYN 60
           ++ A+ LMRR+PP+  E  LS L+ L+P    DLLS VDQPL++  D+  GK+++LC+YN
Sbjct: 5   LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 64

Query: 61  RDADSYRSPWSNKYHPPLEDALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDD 120
           RD DSYRSPWSNKY PPLED   P A LRKLE+EAN  F  YRD Y+EGG+SSVY+W+ D
Sbjct: 65  RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLD 124

Query: 121 NEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLT 179
           + GF    LIKK G  + +       +G WD+IHV+EV  +  G  A Y LTSTVML L 
Sbjct: 125 H-GFAGVILIKKAGDGSKK------IKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQ 177

Query: 180 TDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKTKE 237
           T+   SGT +L GS+ RQM  D +VS+   H+ N+G+++E+ME K+R++L+++YFGKTK+
Sbjct: 178 TNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKD 237

Query: 238 MVCTLR 243
           +V  LR
Sbjct: 238 IVNGLR 243

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	258
d1iznb_	270	Capz beta-1 subunit {Chicken (Gallus gallus) [TaxI	100.0
d1izna_	275	Capz alpha-1 subunit {Chicken (Gallus gallus) [Tax	98.33

>d1iznb_ e.43.1.2 (B:) Capz beta-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]}

class: Multi-domain proteins (alpha and beta)
fold: Subunits of heterodimeric actin filament capping protein Capz
superfamily: Subunits of heterodimeric actin filament capping protein Capz
family: Capz beta-1 subunit
domain: Capz beta-1 subunit
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=8.3e-124  Score=845.54  Aligned_cols=242  Identities=52%  Similarity=0.943  Sum_probs=234.2

Q ss_pred             ChhHhhhhhcCCcccHHHHHHHHHccCcchhHHHhhcCCCceeeeeecccCceeeecccCCCCCCCCCCCCCCCCCCCCC
Q 025106            1 MEAAMGLMRRMPPKHSETALSALLSLLPDHSSDLLSQVDQPLQVLFDEESGKEFILCEYNRDADSYRSPWSNKYHPPLED   80 (258)
Q Consensus         1 ~d~aLdLlRRlpP~~ie~nl~~l~~L~Pdl~edLLssVDqPLkv~~d~~~~k~yL~CdYNRDgDSYRSPwSNkY~P~l~d   80 (258)
                      +||||||||||||++||+||++||+|+|+||+||||+|||||||++|+++||+||+||||||||||||||||+||||++|
T Consensus         5 ~daaLdLlRRlpP~~ie~~l~~l~~L~pdl~edLLssVD~PLki~~d~~~~k~yL~CdyNRDgDSYRSPwSNkY~P~~ed   84 (270)
T d1iznb_           5 LDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSNKYDPPLED   84 (270)
T ss_dssp             HHHHHHHHTTSCGGGHHHHHHHHHHHCGGGHHHHHHHSCCCCEEEEETTTTEEEEECGGGEETTEEECTTTCCEESCCSS
T ss_pred             HHHHHHHHhcCChHHHHHHHHHHHhhCHHHHHHHHHhCCCcceEeEchhhCCeeEeecccCCCccccCCCCCCcCCCccC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhhhcCCceeEEEeecCCCCeeEEEEEEecCCCCcCCCCCCCCCccceeeEEEEEee
Q 025106           81 ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTAQGRRGHLEEGAWDAIHVIEVAP  160 (258)
Q Consensus        81 g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~gFag~vLiKK~~~~s~~~~~~~~~~G~WDSIHV~EV~~  160 (258)
                      |++||++||+||++||++||+||+||||||||||||||+|+ ||||||||||+++++++      .+|+|||||||||++
T Consensus        85 g~~PS~~LR~LEi~aN~~Fd~Yr~lYYegGvSSVYlWdld~-gFag~vliKK~~~~~~~------~~G~WDsIHV~ev~~  157 (270)
T d1iznb_          85 GAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDH-GFAGVILIKKAGDGSKK------IKGCWDSIHVVEVQE  157 (270)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEEEECSS-EEEEEEEEEEECCTTSS------EEEEEEEEEEEEEEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhcCCcceEEEEecCC-CceEEEEEEecCCCCCC------ceeeeeeeEEEEEee
Confidence            99999999999999999999999999999999999999985 89999999999988765      789999999999986


Q ss_pred             -cCCceeEEEEeeEEEEEeeeCCCCcceeeecceeeeeecccccccc--chhhhhhhHHHHHHHHHHhhhhhhhhccchH
Q 025106          161 -EEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKE  237 (258)
Q Consensus       161 -~~~~~~~YklTSTvmL~l~~~~~~~g~~~LsGsltRq~e~~~~~~~--~Hi~NiG~mIEdmE~~mR~~L~~VYf~Ktkd  237 (258)
                       ++++++||||||||||+|++++++.|.|+|||+||||+|+++++++  +||+|||+|||+||++||++||+||||||||
T Consensus       158 ~~s~~~~~YkltSTv~L~l~~~~~~~g~~~LsGsltrq~e~~~~v~~~~~Hi~NiG~mIEdmE~~mR~~L~~VYf~Ktkd  237 (270)
T d1iznb_         158 KSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKD  237 (270)
T ss_dssp             CTTTSEEEEEEEEEEEEEEEEEEGGGEEEEEEEEEEEEEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             cccCCeEEEEEeeEEEEEEecCCCccceEeecceeeeeecccccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             4577899999999999999999899999999999999999999988  8999999999999999999999999999999


Q ss_pred             hhcccCCCcccc
Q 025106          238 MVCTLRPPSEVI  249 (258)
Q Consensus       238 Iv~~lRs~~~~~  249 (258)
                      ||++||++.+++
T Consensus       238 Iv~~lRs~~~~~  249 (270)
T d1iznb_         238 IVNGLRSIDAIP  249 (270)
T ss_dssp             HHHHHCCSSCCC
T ss_pred             HHHhcccCCCCC
Confidence            999999998876

>d1izna_ e.43.1.1 (A:) Capz alpha-1 subunit {Chicken (Gallus gallus) [TaxId: 9031]}

class: Multi-domain proteins (alpha and beta)
fold: Subunits of heterodimeric actin filament capping protein Capz
superfamily: Subunits of heterodimeric actin filament capping protein Capz
family: Capz alpha-1 subunit
domain: Capz alpha-1 subunit
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.33  E-value=6.4e-06  Score=72.99  Aligned_cols=230  Identities=15%  Similarity=0.224  Sum_probs=144.2

Q ss_pred             hHhhhhhcCCcccHHHHHHHHHccCcc---hhHHHhhc-----CCCceeeeeecccCceeeecccCCCCCC-CCCCCCC-
Q 025106            3 AAMGLMRRMPPKHSETALSALLSLLPD---HSSDLLSQ-----VDQPLQVLFDEESGKEFILCEYNRDADS-YRSPWSN-   72 (258)
Q Consensus         3 ~aLdLlRRlpP~~ie~nl~~l~~L~Pd---l~edLLss-----VDqPLkv~~d~~~~k~yL~CdYNRDgDS-YRSPwSN-   72 (258)
                      -|-+++..=||-++..-+++|..|..+   +-+-+...     .+|=..|.-+ ....+.|.|.||+-|++ |==|=+. 
T Consensus        10 i~~~fi~~aPPGE~~~V~~Dl~~l~~d~~~~~~~~~~a~~~yN~~q~~~v~l~-g~~~~viis~~n~l~~~ry~Dp~~k~   88 (275)
T d1izna_          10 IAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIE-GYDDQVLITEHGDLGNGRFLDPRNKI   88 (275)
T ss_dssp             HHHHHHHTCCTTCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTTEEECCT-TSSCCEEECSTTBCSSSEEECTTTCE
T ss_pred             HHHHHHHcCCChhHHHHHHHHHHHhCCchHHHhhHHHHHHHHHHHheEEEEcC-CCCccEEEEeccccCCCEEEccCcce
Confidence            466788889999999999999999753   11222222     2332222222 12368999999999974 3222221 


Q ss_pred             --CCCCC---CCC--CCCCChHHHHHHHHHHHHHHHHHHhhhcCCceeEEEeecCCCCeeEEEEE-EecCCCCcCCCCCC
Q 025106           73 --KYHPP---LED--ALYPPAELRKLEIEANEVFAIYRDQYYEGGISSVYMWEDDNEGFVACFLI-KKDGSKTAQGRRGH  144 (258)
Q Consensus        73 --kY~P~---l~d--g~~PS~~LR~LEi~aN~~Fd~Yr~lYYeGGvSSVYlWdld~~gFag~vLi-KK~~~~s~~~~~~~  144 (258)
                        +|+.-   ..|  ..-|...+.++-....+.+..|.+.+|-+|+++||.=+.|+ .+.-++.| =+.-++.+      
T Consensus        89 sF~~DHl~~~~sd~e~~~~~~~~e~~r~al~~~L~~Yv~~hYp~g~~~vy~~~~~~-~~~l~i~I~~~~~~p~N------  161 (275)
T d1izna_          89 SFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDG-QQTIIACIESHQFQPKN------  161 (275)
T ss_dssp             EEECCSSSSCCCCCEECCCCCSSHHHHHHHHHHHHHHHHHHCTTEEEEEEEEEETT-EEEEEEEEEEEEEEGGG------
T ss_pred             EEEEEcccCeEccCccCCCcchhHHHHHHHHHHHHHHHHHhCCCCceEEEccCCCC-CceEEEEEEeCcCCccc------
Confidence              22220   011  11233346666677788889999999999999999877664 33333322 33223333      


Q ss_pred             CCCccceeeEEEEEeecCCceeEEEEeeEEEEEeeeCCCCcceeeecceeeeeecccccccc--chhhhhhhHHHHHHHH
Q 025106          145 LEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGK  222 (258)
Q Consensus       145 ~~~G~WDSIHV~EV~~~~~~~~~YklTSTvmL~l~~~~~~~g~~~LsGsltRq~e~~~~~~~--~Hi~NiG~mIEdmE~~  222 (258)
                      .-.|.|.|+=.|.|.+.+     =.|+.+|-+.+--=.+  |.+.|.  -++..+.+..+.+  .-..+|=+.|++.|++
T Consensus       162 FwnG~WrS~w~~~~~~~~-----~~l~G~i~v~vHYyEd--GNVqL~--s~k~~~~s~~~~~~~~~A~~iv~~I~~~E~~  232 (275)
T d1izna_         162 FWNGRWRSEWKFTITPPT-----AQVAAVLKIQVHYYED--GNVQLV--SHKDIQDSVQVSSDVQTAKEFIKIIENAENE  232 (275)
T ss_dssp             TEEEEEEEEEEEECCSSE-----EEEEEEEEEEEEECSS--EEEEEE--EEEEEEEEEECCCSHHHHHHHHHHHHHHHHH
T ss_pred             ccCceeEEEEEEEccCCC-----cEEEEEEEEEEEEEec--CeEEEE--EccccccccccCChHHHHHHHHHHHHHHHHH
Confidence            357999999998886221     1366766666543223  666653  3344444444444  2356777889999999


Q ss_pred             HHhhhhhhhhccchHhhcccCCCcccc
Q 025106          223 LRNSLDQVYFGKTKEMVCTLRPPSEVI  249 (258)
Q Consensus       223 mR~~L~~VYf~KtkdIv~~lRs~~~~~  249 (258)
                      .-..|++-|-.=-..-+..||..-+++
T Consensus       233 ~q~~l~e~f~~ls~~~FK~LRR~LPVT  259 (275)
T d1izna_         233 YQTAISENYQTMSDTTFKALRRQLPVT  259 (275)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHSCSSCTT
T ss_pred             HHHHHHHHHHHhCHHHHHHHHhhCCcC
Confidence            999999988776666778899776554