Citrus Sinensis ID: 025117

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------
Protein Sequence
MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAAV
Secondary Structure (PSIPRED)
cHHHccccEEEEEccccccHHHHHHHHHHcccccccccEEcHHHHHHHHHHccccccccEEEEEccHHHHHHHHHcccEEEcccccccccccccccccccccccccEEEEEccccccHHHHHHHHHHHHcccccEEEEEcccccccccccccccccHHHHHHHHHHHcccccEEccccHHHHHHHHHHHccccccEEEEcccHHHHHHHHHHccccEEEEccccccHHHHccccccccccEEEccHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHcccEEEEEEccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHcccEEEcccccccccccccccccccccccccEEEEEccccccHHHHHHHHHHHHcccccEEEEEcccccccccccccccccHHHHHHHHHHcccccEEEccccHHHHHHHHHHccccHccEEEEccccccHHHHHHcccccEEEEEcccccHHHHHcccccccccEEcccHHHHHHHHHccc
Coil and Loop (DISEMBL)
mlrskgkrlvfvtnnstksrkQYGKKFETLGLTVTEEEIFASSFAAAAYLksidfpkdkkvyvvGEDGILKELELAgfqylggpedggkkielkpgflmehdkdvgavVVGFDRYFNYYKVQYGTlcirenpgclfiatnrDAVTHLtdaqewagggsmvgafvgstqreplvvgkpstFMMDYLANKFgiqksqicmvgdrldtdilfgqnggckTLLVLSGVtslsmlqspnnsiqpdfytnkisDFLSLKAAAV
Flexible Loop (DISEMBL)
mlrskgkrlvfvtnnstksrkqygKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSpnnsiqpdfytnKISDFLSLKAAAV
Low Complexity Region (SEG)
MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIfassfaaaaYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKtllvlsgvtslsmlQSPNNSIQPDFYTNKISDFLSLKAAAV
Disordered region (IsUnstruct)
**********************YGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML*********DFYTNKISDF********
Disordered Region (DISOPRED)
MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA*
Disordered Region (DISEMBL)
MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAAV
Disordered Region (DISPRO)
MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAAV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAAV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	257	2.2.26 [Sep-21-2011]
Q2T9S4	321	Phosphoglycolate phosphat	yes	no	0.929	0.744	0.387	1e-41
Q8CHP8	321	Phosphoglycolate phosphat	yes	no	0.926	0.741	0.386	2e-39
A6NDG6	321	Phosphoglycolate phosphat	yes	no	0.945	0.757	0.378	1e-38
Q8VD52	309	Pyridoxal phosphate phosp	no	no	0.906	0.754	0.357	7e-38
Q00472	298	4-nitrophenylphosphatase	yes	no	0.937	0.808	0.350	3e-36
Q3ZBF9	296	Pyridoxal phosphate phosp	no	no	0.918	0.797	0.344	5e-36
P19881	312	4-nitrophenylphosphatase	yes	no	0.949	0.782	0.381	1e-35
Q96GD0	296	Pyridoxal phosphate phosp	no	no	0.918	0.797	0.343	2e-35
P60487	292	Pyridoxal phosphate phosp	no	no	0.906	0.797	0.338	3e-35
Q5F4B1	312	Phosphoglycolate phosphat	no	no	0.945	0.778	0.369	9e-35

>sp|Q2T9S4|PGP_BOVIN Phosphoglycolate phosphatase OS=Bos taurus GN=PGP PE=2 SV=1

 Score =  170 bits (430), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/271 (38%), Positives = 151/271 (55%), Gaps = 32/271 (11%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTE-----EEIFASSFAAAAYLKS-IDF 55
           LR++GKRL F+TNNS+K+R+ Y +K   LG           E+F +++  A YL+  +  
Sbjct: 56  LRARGKRLAFITNNSSKTREAYAEKLRCLGFGAPAGPDAGREVFGTAYCTALYLRQRLTG 115

Query: 56  PKDKKVYVVGEDGILKELELAGFQYLG-GPE----DGGKKIELKPGFLMEH--DKDVGAV 108
           P   K YV+G   +  ELE  G   +G GPE    DG       PG  ++   + DV AV
Sbjct: 116 PPAPKAYVLGSVALAAELEAVGVSCVGVGPEPLLGDG-------PGAWLDAPLEPDVRAV 168

Query: 109 VVGFDRYFNYYKVQYGTLCIR--ENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGS 166
           VVGFD +F+Y K+   T  +R  + P CL + TN D    L + +  AG G +V A   +
Sbjct: 169 VVGFDPHFSYMKL---TKAVRYLQQPDCLLVGTNMDNRLPLENGRFIAGTGCLVRAVEMA 225

Query: 167 TQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS 226
            QR+  ++GKPS F+ D ++ ++GI   +  MVGDRLDTDIL G   G KT+L L+GV+S
Sbjct: 226 AQRQADIIGKPSRFIFDCVSQEYGIHPERTVMVGDRLDTDILLGVTCGLKTILTLTGVSS 285

Query: 227 LSMLQSPNNS-------IQPDFYTNKISDFL 250
           L  ++S   S       + PDFY + I+D L
Sbjct: 286 LRDVKSNQESDCMAKKKMVPDFYVDSIADLL 316

Bos taurus (taxid: 9913)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 8

>sp|Q8CHP8|PGP_MOUSE Phosphoglycolate phosphatase OS=Mus musculus GN=Pgp PE=2 SV=1

 Score =  162 bits (410), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/272 (38%), Positives = 151/272 (55%), Gaps = 34/272 (12%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGL--TVTEE---EIFASSFAAAAYLKS-IDF 55
           LR++GKRL F+TNNS+K+R  Y +K   LG    V  E   E+F +++ +A YL+  +  
Sbjct: 56  LRARGKRLGFITNNSSKTRTAYAEKLRRLGFGGPVGPEAGLEVFGTAYCSALYLRQRLAG 115

Query: 56  PKDKKVYVVGEDGILKELELAGFQYLG-GPE----DGGK---KIELKPGFLMEHDKDVGA 107
             D K YV+G   +  ELE  G   +G GP+    DG      + L+P        DV A
Sbjct: 116 VPDPKAYVLGSPALAAELEAVGVTSVGVGPDVLHGDGPSDWLAVPLEP--------DVRA 167

Query: 108 VVVGFDRYFNYYKVQYGTLCIR--ENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVG 165
           VVVGFD +F+Y K+   T  +R  + P CL + TN D    L + +  AG G +V A   
Sbjct: 168 VVVGFDPHFSYMKL---TKAVRYLQQPDCLLVGTNMDNRLPLENGRFIAGTGCLVRAVEM 224

Query: 166 STQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVT 225
           + QR+  ++GKPS F+ D ++ ++GI   +  MVGDRLDTDIL G     KT+L L+GV+
Sbjct: 225 AAQRQADIIGKPSRFIFDCVSQEYGINPERTVMVGDRLDTDILLGSTCSLKTILTLTGVS 284

Query: 226 SLSMLQSPNNS-------IQPDFYTNKISDFL 250
           SL  ++S   S       + PDFY + I+D L
Sbjct: 285 SLEDVKSNQESDCMFKKKMVPDFYVDSIADLL 316

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|A6NDG6|PGP_HUMAN Phosphoglycolate phosphatase OS=Homo sapiens GN=PGP PE=1 SV=1

 Score =  159 bits (403), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/267 (37%), Positives = 148/267 (55%), Gaps = 24/267 (8%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEE-----EIFASSFAAAAYLKS-IDF 55
           LR++GKRL F+TNNS+K+R  Y +K   LG           E+F +++  A YL+  +  
Sbjct: 56  LRARGKRLGFITNNSSKTRAAYAEKLRRLGFGGPAGPGASLEVFGTAYCTALYLRQRLAG 115

Query: 56  PKDKKVYVVGEDGILKELELAGFQYLG-GPEDGGKKIELKPGFLMEH--DKDVGAVVVGF 112
               K YV+G   +  ELE  G   +G GPE    +    PG  +    + DV AVVVGF
Sbjct: 116 APAPKAYVLGSPALAAELEAVGVASVGVGPEPLQGE---GPGDWLHAPLEPDVRAVVVGF 172

Query: 113 DRYFNYYKVQYGTLCIR--ENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQRE 170
           D +F+Y K+   T  +R  + PGCL + TN D    L + +  AG G +V A   + QR+
Sbjct: 173 DPHFSYMKL---TKALRYLQQPGCLLVGTNMDNRLPLENGRFIAGTGCLVRAVEMAAQRQ 229

Query: 171 PLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML 230
             ++GKPS F+ D ++ ++GI   +  MVGDRLDTDIL G   G KT+L L+GV++L  +
Sbjct: 230 ADIIGKPSRFIFDCVSQEYGINPERTVMVGDRLDTDILLGATCGLKTILTLTGVSTLGDV 289

Query: 231 QSPNNS-------IQPDFYTNKISDFL 250
           ++   S       + PDFY + I+D L
Sbjct: 290 KNNQESDCVSKKKMVPDFYVDSIADLL 316

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|Q8VD52|PLPP_RAT Pyridoxal phosphate phosphatase OS=Rattus norvegicus GN=Pdxp PE=1 SV=2

 Score =  157 bits (397), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 92/257 (35%), Positives = 140/257 (54%), Gaps = 24/257 (9%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASSFAAAAYLKS-IDFPKDK 59
           L   GK  +FV+NNS ++R +   +F  LG T +  EE+F+S+  AA  L+  +  P D 
Sbjct: 47  LAQAGKATLFVSNNSRRARPELALRFARLGFTGLRAEELFSSAVCAARLLRQRLPGPPDA 106

Query: 60  K--VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFN 117
              V+V+G +G+  EL  AG +  G P D               D  V AV+VG+D +F+
Sbjct: 107 PGAVFVLGGEGLRAELRAAGLRLAGDPGD---------------DPRVRAVLVGYDEHFS 151

Query: 118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKP 177
           + K+      +R +P CL +AT+RD    LTD     G GS+  A   ++ R+ LVVGKP
Sbjct: 152 FAKLTEACAHLR-DPDCLLVATDRDPWHPLTDGSRTPGTGSLAAAVETASGRQALVVGKP 210

Query: 178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL----SMLQSP 233
           S +M   +   F +  +++ MVGDRL+TDILFG   G  T+L L+GV+SL    + L + 
Sbjct: 211 SPYMFQCITEDFSVDPARMLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLAAG 270

Query: 234 NNSIQPDFYTNKISDFL 250
            + + P +Y   I+D +
Sbjct: 271 QHDLVPHYYVESIADLM 287

Protein serine phosphatase that dephosphorylates 'Ser-3' in cofilin and probably also dephosphorylates phospho-serine residues in DSTN. Regulates cofilin-dependent actin cytoskeleton reorganization. Required for normal progress through mitosis and normal cytokinesis. Does not dephosphorylate phospho-threonines in LIMK1. Does not dephosphorylate peptides containing phospho-tyrosine. Pyridoxal phosphate phosphatase. Has some activity towards pyridoxal 5'-phosphate (PLP), pyridoxine 5'-phosphate (PMP) and pyridoxine 5'-phosphate (PNP), with a highest activity with PLP followed by PNP.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 4

>sp|Q00472|PNPP_SCHPO 4-nitrophenylphosphatase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pho2 PE=4 SV=2

 Score =  152 bits (383), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 144/254 (56%), Gaps = 13/254 (5%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSI-DFPKDK 59
           +LRS GK+++FV+NNSTKSR+ Y  K    G+    EEI+ S++++A Y+K +   P DK
Sbjct: 45  LLRSLGKQIIFVSNNSTKSRETYMNKINEHGIAAKLEEIYPSAYSSATYVKKVLKLPADK 104

Query: 60  KVYVVGEDGILKELELAGFQYLGGPEDGGKK-IELKPGFLMEHDKDVGAVVVGFDRYFNY 118
           KV+V+GE GI  EL+  G  ++GG +   ++ +  +    +  D  VGAV+ G D +  Y
Sbjct: 105 KVFVLGEAGIEDELDRVGVAHIGGTDPSLRRALASEDVEKIGPDPSVGAVLCGMDMHVTY 164

Query: 119 YK----VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVV 174
            K     QY      ++P C F+ TN+D+ T  T+ +   G G++    + ST R+P ++
Sbjct: 165 LKYCMAFQY-----LQDPNCAFLLTNQDS-TFPTNGKFLPGSGAISYPLIFSTGRQPKIL 218

Query: 175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGC-KTLLVLSGVTSLSMLQSP 233
           GKP   MM+ +       + + C VGDRL+TDI F +N     +LLVL+GV+    +   
Sbjct: 219 GKPYDEMMEAIIANVNFDRKKACFVGDRLNTDIQFAKNSNLGGSLLVLTGVSKEEEILEK 278

Query: 234 NNSIQPDFYTNKIS 247
           +  + PD+Y   ++
Sbjct: 279 DAPVVPDYYVESLA 292

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 1

>sp|Q3ZBF9|PLPP_BOVIN Pyridoxal phosphate phosphatase OS=Bos taurus GN=PDXP PE=1 SV=1

 Score =  151 bits (381), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 141/258 (54%), Gaps = 22/258 (8%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASSFAAAAYLKS-IDFPKDK 59
           L   GK  +FV+NNS ++R +   +F  LG   +  E++F+S+  AA  L+  +  P D 
Sbjct: 47  LAQAGKATLFVSNNSRRARPELALRFARLGFGGLRSEQLFSSALCAARLLRQRLLGPPDT 106

Query: 60  K--VYVVGEDGILKELELAGFQYLGGP-EDGGKKIELKPGFLMEHDKDVGAVVVGFDRYF 116
           +  V+V+G +G+  EL  AG +  G P ED G    ++            AV+VG+D +F
Sbjct: 107 QGAVFVLGGEGLRAELRAAGLRLAGDPSEDPGAAPRVR------------AVLVGYDEHF 154

Query: 117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGK 176
           ++ K+      +R +P CL +AT+RD    L+D     G GS+  A   ++ R+ LVVGK
Sbjct: 155 SFAKLSEACAHLR-DPDCLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGK 213

Query: 177 PSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL----SMLQS 232
           PS +M + +   F +   +  MVGDRL+TDILFG   G  T+L L+GV+SL    + L +
Sbjct: 214 PSPYMFECITEHFSVDPGRTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLAA 273

Query: 233 PNNSIQPDFYTNKISDFL 250
             + + P +Y   I+D +
Sbjct: 274 GQHDLVPHYYVESIADLM 291

Protein serine phosphatase that dephosphorylates 'Ser-3' in cofilin and probably also dephosphorylates phospho-serine residues in DSTN. Regulates cofilin-dependent actin cytoskeleton reorganization. Required for normal progress through mitosis and normal cytokinesis. Does not dephosphorylate phospho-threonines in LIMK1. Does not dephosphorylate peptides containing phospho-tyrosine. Pyridoxal phosphate phosphatase. Has some activity towards pyridoxal 5'-phosphate (PLP), pyridoxine 5'-phosphate (PMP) and pyridoxine 5'-phosphate (PNP), with a highest activity with PLP followed by PNP.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 4

>sp|P19881|PNPP_YEAST 4-nitrophenylphosphatase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHO13 PE=1 SV=2

 Score =  149 bits (377), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/265 (38%), Positives = 147/265 (55%), Gaps = 21/265 (7%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDF----P 56
           +L+  GK+L+FVTNNSTKSR  Y KKF + G+ V EE+IF S +A+A Y++  DF    P
Sbjct: 51  LLKQLGKQLIFVTNNSTKSRLAYTKKFASFGIDVKEEQIFTSGYASAVYIR--DFLKLQP 108

Query: 57  KDKKVYVVGEDGILKELELAGFQYLGG-------PEDGGKKIELKPGFLMEHDKDVGAVV 109
              KV+V GE GI +EL+L G++ LGG       P D  K   L  G     DKDV  V+
Sbjct: 109 GKDKVWVFGESGIGEELKLMGYESLGGADSRLDTPFDAAKSPFLVNGL----DKDVSCVI 164

Query: 110 VGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQR 169
            G D   NY+++   TL   +     F+ TN D+ T       + G GSM+ +   S+ R
Sbjct: 165 AGLDTKVNYHRLAV-TLQYLQKDSVHFVGTNVDS-TFPQKGYTFPGAGSMIESLAFSSNR 222

Query: 170 EPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV--TSL 227
            P   GKP+  M++ + + F + +S+ CMVGDRL+TD+ FG  GG    L++     T  
Sbjct: 223 RPSYCGKPNQNMLNSIISAFNLDRSKCCMVGDRLNTDMKFGVEGGLGGTLLVLSGIETEE 282

Query: 228 SMLQSPNNSIQPDFYTNKISDFLSL 252
             L+  ++  +P FY +K+ D  +L
Sbjct: 283 RALKISHDYPRPKFYIDKLGDIYTL 307

PHO13 is dispensable for vegetative growth and sporulation.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 1

>sp|Q96GD0|PLPP_HUMAN Pyridoxal phosphate phosphatase OS=Homo sapiens GN=PDXP PE=1 SV=2

 Score =  149 bits (376), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 137/256 (53%), Gaps = 20/256 (7%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASSFAAAAYLKS-IDFPKDK 59
           L   GK  +FV+NNS ++R +   +F  LG   +  E++F+S+  AA  L+  +  P D 
Sbjct: 47  LARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDA 106

Query: 60  K--VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFN 117
              V+V+G +G+  EL  AG +  G P  G                 V AV+VG+D +F+
Sbjct: 107 PGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAA-----------PRVRAVLVGYDEHFS 155

Query: 118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKP 177
           + K++     +R +P CL +AT+RD    L+D     G GS+  A   ++ R+ LVVGKP
Sbjct: 156 FAKLREACAHLR-DPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKP 214

Query: 178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL----SMLQSP 233
           S +M + +   F I  ++  MVGDRL+TDILFG   G  T+L L+GV+ L    + L + 
Sbjct: 215 SPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAG 274

Query: 234 NNSIQPDFYTNKISDF 249
            + + P +Y   I+D 
Sbjct: 275 QHDLVPHYYVESIADL 290

Protein serine phosphatase that dephosphorylates 'Ser-3' in cofilin and probably also dephosphorylates phospho-serine residues in DSTN. Regulates cofilin-dependent actin cytoskeleton reorganization. Required for normal progress through mitosis and normal cytokinesis. Does not dephosphorylate phospho-threonines in LIMK1. Does not dephosphorylate peptides containing phospho-tyrosine. Pyridoxal phosphate phosphatase. Has some activity towards pyridoxal 5'-phosphate (PLP), pyridoxine 5'-phosphate (PMP) and pyridoxine 5'-phosphate (PNP), with a highest activity with PLP followed by PNP.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 4

>sp|P60487|PLPP_MOUSE Pyridoxal phosphate phosphatase OS=Mus musculus GN=Pdxp PE=1 SV=1

 Score =  148 bits (374), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 136/257 (52%), Gaps = 24/257 (9%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASSFAAAAYLKS-IDFPKDK 59
           L   GK  +FV+NNS ++R +   +F  LG   +  E++F+S+  AA  L+  +  P D 
Sbjct: 47  LARAGKNTLFVSNNSRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDA 106

Query: 60  K--VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFN 117
              V+V+G +G+  EL  AG +  G P +               D  V AV+VG+D  F+
Sbjct: 107 SGAVFVLGGEGLRAELRAAGLRLAGDPGE---------------DPRVRAVLVGYDEQFS 151

Query: 118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKP 177
           + ++      +R +P CL +AT+RD    L+D     G GS+  A   ++ R+ LVVGKP
Sbjct: 152 FSRLTEACAHLR-DPDCLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKP 210

Query: 178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL----SMLQSP 233
           S +M   +   F +  ++  MVGDRL+TDILFG   G  T+L L+GV+SL    + L + 
Sbjct: 211 SPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAG 270

Query: 234 NNSIQPDFYTNKISDFL 250
              + P +Y   I+D +
Sbjct: 271 QRDLVPHYYVESIADLM 287

Protein serine phosphatase that dephosphorylates 'Ser-3' in cofilin and probably also dephosphorylates phospho-serine residues in DSTN. Regulates cofilin-dependent actin cytoskeleton reorganization. Required for normal progress through mitosis and normal cytokinesis. Does not dephosphorylate phospho-threonines in LIMK1. Does not dephosphorylate peptides containing phospho-tyrosine. Pyridoxal phosphate phosphatase. Has some activity towards pyridoxal 5'-phosphate (PLP), pyridoxine 5'-phosphate (PMP) and pyridoxine 5'-phosphate (PNP), with a highest activity with PLP followed by PNP.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 4

>sp|Q5F4B1|PGP_CHICK Phosphoglycolate phosphatase OS=Gallus gallus GN=PGP PE=2 SV=1

 Score =  147 bits (370), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 131/252 (51%), Gaps = 9/252 (3%)

Query: 7   KRLVFVTNNSTKSRKQYGKKFETLGLTVTE-EEIFASSFAAAAYLKSIDFPKDKKVYVVG 65
           KRL +VTNNS+++R  Y +K   LG    E   +F S+F AA YL+    P     YV+G
Sbjct: 57  KRLCYVTNNSSRTRVAYTEKLRRLGFPPAEPRHVFGSAFCAARYLRQA-LPPGAAAYVLG 115

Query: 66  EDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGT 125
              +  ELE AG  +LG                   +  V AV+VGFD +F+Y K+    
Sbjct: 116 GPALSAELEAAGIPHLGPGPAALPGPAPADWAQAPLEPAVRAVLVGFDEHFSYAKLCQAL 175

Query: 126 LCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYL 185
             +   P CL + TNRD    L       G G +V A   + +RE L+VGKPS ++ D +
Sbjct: 176 RYLLRGPDCLLVGTNRDNRLPLEGGSAIPGTGCLVKAVETAAEREALIVGKPSRYIFDCV 235

Query: 186 ANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNS-------IQ 238
           A++F I  ++  MVGDRLDTDIL G   G  TLL L+GV++L  ++    S       + 
Sbjct: 236 ASEFDIDPARTIMVGDRLDTDILMGNTCGLTTLLTLTGVSTLEEVRGHQESDCPARQGLV 295

Query: 239 PDFYTNKISDFL 250
           PD+Y + I+D L
Sbjct: 296 PDYYVDSIADLL 307

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
224109186	308	predicted protein [Populus trichocarpa]	1.0	0.834	0.980	1e-145
217072758	367	unknown [Medicago truncatula]	1.0	0.700	0.945	1e-142
357507859	367	Phosphoglycolate phosphatase [Medicago t	1.0	0.700	0.945	1e-141
357507861	385	Phosphoglycolate phosphatase [Medicago t	1.0	0.667	0.883	1e-138
118486367	371	unknown [Populus trichocarpa] gi|1184876	1.0	0.692	0.976	1e-138
356531866	369	PREDICTED: phosphoglycolate phosphatase-	1.0	0.696	0.957	1e-138
449442663	376	PREDICTED: phosphoglycolate phosphatase-	1.0	0.683	0.957	1e-137
356568529	368	PREDICTED: phosphoglycolate phosphatase-	1.0	0.698	0.953	1e-137
255547472	360	4-nitrophenylphosphatase, putative [Rici	1.0	0.713	0.957	1e-137
255634458	369	unknown [Glycine max]	1.0	0.696	0.953	1e-136

>gi|224109186|ref|XP_002315115.1| predicted protein [Populus trichocarpa] gi|222864155|gb|EEF01286.1| predicted protein [Populus trichocarpa]

 Score =  518 bits (1334), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 252/257 (98%), Positives = 254/257 (98%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
           MLRS+GKRLVFVTNNSTKSRKQYGKKFETLGL V+EEEIFASSFAAAAYLKSIDFPKDKK
Sbjct: 52  MLRSRGKRLVFVTNNSTKSRKQYGKKFETLGLDVSEEEIFASSFAAAAYLKSIDFPKDKK 111

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK
Sbjct: 112 VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 171

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF
Sbjct: 172 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 231

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           MMDYLANKFGI KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP NSIQPD
Sbjct: 232 MMDYLANKFGILKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPGNSIQPD 291

Query: 241 FYTNKISDFLSLKAAAV 257
           FYTNKISDFLSLKAAAV
Sbjct: 292 FYTNKISDFLSLKAAAV 308

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072758|gb|ACJ84739.1| unknown [Medicago truncatula]

 Score =  508 bits (1309), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 243/257 (94%), Positives = 250/257 (97%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
           MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL V  EEIFASSFA AAYLKSIDFPKDKK
Sbjct: 111 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLNVNAEEIFASSFAVAAYLKSIDFPKDKK 170

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYV+GEDGILKELELAG+QY+GGPEDGGKKIELKPGFLMEHD+DVGAVVVGFDRYFNYYK
Sbjct: 171 VYVIGEDGILKELELAGYQYVGGPEDGGKKIELKPGFLMEHDEDVGAVVVGFDRYFNYYK 230

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA VGSTQREPLVVGKPSTF
Sbjct: 231 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGALVGSTQREPLVVGKPSTF 290

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           MMDYLAN+FGI KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVT+L +LQSPNNSIQPD
Sbjct: 291 MMDYLANEFGISKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTTLPVLQSPNNSIQPD 350

Query: 241 FYTNKISDFLSLKAAAV 257
           FYTNKISDFLSLKAAAV
Sbjct: 351 FYTNKISDFLSLKAAAV 367

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357507859|ref|XP_003624218.1| Phosphoglycolate phosphatase [Medicago truncatula] gi|355499233|gb|AES80436.1| Phosphoglycolate phosphatase [Medicago truncatula]

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 243/257 (94%), Positives = 250/257 (97%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
           MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL V  EEIFASSFA AAYLKSIDFPKDKK
Sbjct: 111 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLNVNAEEIFASSFAVAAYLKSIDFPKDKK 170

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYV+GEDGILKELELAG+QY+GGPEDGGKKIELKPGFLMEHD+DVGAVVVGFDRYFNYYK
Sbjct: 171 VYVIGEDGILKELELAGYQYVGGPEDGGKKIELKPGFLMEHDEDVGAVVVGFDRYFNYYK 230

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA VGSTQREPLVVGKPSTF
Sbjct: 231 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGALVGSTQREPLVVGKPSTF 290

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           MMDYLAN+FGI KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVT+L +LQSPNNSIQPD
Sbjct: 291 MMDYLANEFGISKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTTLPVLQSPNNSIQPD 350

Query: 241 FYTNKISDFLSLKAAAV 257
           FYTNKISDFLSLKAAAV
Sbjct: 351 FYTNKISDFLSLKAAAV 367

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357507861|ref|XP_003624219.1| Phosphoglycolate phosphatase [Medicago truncatula] gi|355499234|gb|AES80437.1| Phosphoglycolate phosphatase [Medicago truncatula]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 243/275 (88%), Positives = 250/275 (90%), Gaps = 18/275 (6%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
           MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL V  EEIFASSFA AAYLKSIDFPKDKK
Sbjct: 111 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLNVNAEEIFASSFAVAAYLKSIDFPKDKK 170

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYV+GEDGILKELELAG+QY+GGPEDGGKKIELKPGFLMEHD+DVGAVVVGFDRYFNYYK
Sbjct: 171 VYVIGEDGILKELELAGYQYVGGPEDGGKKIELKPGFLMEHDEDVGAVVVGFDRYFNYYK 230

Query: 121 VQ------------------YGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA 162
           VQ                  YGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA
Sbjct: 231 VQICFLCSLFYSMAKSKFYQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA 290

Query: 163 FVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS 222
            VGSTQREPLVVGKPSTFMMDYLAN+FGI KSQICMVGDRLDTDILFGQNGGCKTLLVLS
Sbjct: 291 LVGSTQREPLVVGKPSTFMMDYLANEFGISKSQICMVGDRLDTDILFGQNGGCKTLLVLS 350

Query: 223 GVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAAV 257
           GVT+L +LQSPNNSIQPDFYTNKISDFLSLKAAAV
Sbjct: 351 GVTTLPVLQSPNNSIQPDFYTNKISDFLSLKAAAV 385

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486367|gb|ABK95024.1| unknown [Populus trichocarpa] gi|118487622|gb|ABK95636.1| unknown [Populus trichocarpa]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 251/257 (97%), Positives = 254/257 (98%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
           MLRS+GKRLVFVTNNSTKSRKQYGKKFETLGL V+EEEIFASSFAAAAYLKSIDFPKDKK
Sbjct: 115 MLRSRGKRLVFVTNNSTKSRKQYGKKFETLGLDVSEEEIFASSFAAAAYLKSIDFPKDKK 174

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK
Sbjct: 175 VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 234

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF
Sbjct: 235 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 294

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           MMDYLANKFGI KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP NSIQPD
Sbjct: 295 MMDYLANKFGILKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPGNSIQPD 354

Query: 241 FYTNKISDFLSLKAAAV 257
           FYTNKISDFLSLKAA+V
Sbjct: 355 FYTNKISDFLSLKAASV 371

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531866|ref|XP_003534497.1| PREDICTED: phosphoglycolate phosphatase-like [Glycine max]

 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 246/257 (95%), Positives = 253/257 (98%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
           MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL V+EEEIFASSFAAAAYLKSIDFPKDKK
Sbjct: 113 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLNVSEEEIFASSFAAAAYLKSIDFPKDKK 172

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYV+GEDGILKELELAG+QYLGGPEDGGKKIELKPGFLMEHD+DVGAVVVGFDRYFNYYK
Sbjct: 173 VYVIGEDGILKELELAGYQYLGGPEDGGKKIELKPGFLMEHDEDVGAVVVGFDRYFNYYK 232

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           +QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA  GSTQREPLVVGKPSTF
Sbjct: 233 IQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGALSGSTQREPLVVGKPSTF 292

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           MMDYLANKFGI KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVT+L+MLQSPNNSIQPD
Sbjct: 293 MMDYLANKFGISKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTTLAMLQSPNNSIQPD 352

Query: 241 FYTNKISDFLSLKAAAV 257
           FYTNKISDFLSLKAAAV
Sbjct: 353 FYTNKISDFLSLKAAAV 369

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442663|ref|XP_004139100.1| PREDICTED: phosphoglycolate phosphatase-like [Cucumis sativus] gi|449485338|ref|XP_004157138.1| PREDICTED: phosphoglycolate phosphatase-like [Cucumis sativus]

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 246/257 (95%), Positives = 253/257 (98%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
           MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL+VTEEEIFASSFAAAAYLKSIDFPK+KK
Sbjct: 120 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLSVTEEEIFASSFAAAAYLKSIDFPKEKK 179

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           +YV+GE+GILKELELAG+QYLGGPEDGGKKIELKPGFLMEHD+DVGAVVVGFDRYFNYYK
Sbjct: 180 IYVIGEEGILKELELAGYQYLGGPEDGGKKIELKPGFLMEHDEDVGAVVVGFDRYFNYYK 239

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA  GSTQREPLVVGKPSTF
Sbjct: 240 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGALCGSTQREPLVVGKPSTF 299

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS LQSPNNSIQPD
Sbjct: 300 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSTLQSPNNSIQPD 359

Query: 241 FYTNKISDFLSLKAAAV 257
           FYTNKISDFLSLKAA V
Sbjct: 360 FYTNKISDFLSLKAATV 376

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568529|ref|XP_003552463.1| PREDICTED: phosphoglycolate phosphatase-like [Glycine max]

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 245/257 (95%), Positives = 253/257 (98%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
           MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL V+EEEIFASSFAAAAYLKSIDFPKDKK
Sbjct: 112 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLNVSEEEIFASSFAAAAYLKSIDFPKDKK 171

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYV+GEDGILKELELAG+QYLGGPEDGGKKIELKPGFLMEHD+DVGAVVVGFDR+FNYYK
Sbjct: 172 VYVIGEDGILKELELAGYQYLGGPEDGGKKIELKPGFLMEHDEDVGAVVVGFDRHFNYYK 231

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           +QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA  GSTQREPLVVGKPSTF
Sbjct: 232 IQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAISGSTQREPLVVGKPSTF 291

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           MMDYLANKFGI KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVT+L+MLQSPNNSIQPD
Sbjct: 292 MMDYLANKFGISKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTTLAMLQSPNNSIQPD 351

Query: 241 FYTNKISDFLSLKAAAV 257
           FYTNKISDFLSLKAAAV
Sbjct: 352 FYTNKISDFLSLKAAAV 368

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547472|ref|XP_002514793.1| 4-nitrophenylphosphatase, putative [Ricinus communis] gi|223545844|gb|EEF47347.1| 4-nitrophenylphosphatase, putative [Ricinus communis]

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 246/257 (95%), Positives = 252/257 (98%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
           MLRS+GKRLVFVTNNSTKSRKQYGKKFETLGL ++EEEIFASSFAAAAYLKSIDFPK+KK
Sbjct: 104 MLRSRGKRLVFVTNNSTKSRKQYGKKFETLGLNISEEEIFASSFAAAAYLKSIDFPKEKK 163

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYV+GEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK
Sbjct: 164 VYVIGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 223

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           VQYGTLC+RENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA  GSTQREPLVVGKPSTF
Sbjct: 224 VQYGTLCVRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAIAGSTQREPLVVGKPSTF 283

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           MMDYLANKFGI KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD
Sbjct: 284 MMDYLANKFGILKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 343

Query: 241 FYTNKISDFLSLKAAAV 257
           FYTNKISDFLSLKAA V
Sbjct: 344 FYTNKISDFLSLKAATV 360

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255634458|gb|ACU17594.1| unknown [Glycine max]

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/257 (95%), Positives = 252/257 (98%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
           MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL V+EEEIFASSFAAAAYLKSIDFPKDKK
Sbjct: 113 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLNVSEEEIFASSFAAAAYLKSIDFPKDKK 172

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYV+GEDGILKELELAG+QYLGGPEDGGKKIELKPGFLMEHD+DVGAVVVGFDRYFNYYK
Sbjct: 173 VYVIGEDGILKELELAGYQYLGGPEDGGKKIELKPGFLMEHDEDVGAVVVGFDRYFNYYK 232

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           +QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA  GSTQREPLVVGKPSTF
Sbjct: 233 IQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGALSGSTQREPLVVGKPSTF 292

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           MMDYLANKFGI KSQICMVGDRLDTDILFGQNGG KTLLVLSGVT+L+MLQSPNNSIQPD
Sbjct: 293 MMDYLANKFGISKSQICMVGDRLDTDILFGQNGGYKTLLVLSGVTTLAMLQSPNNSIQPD 352

Query: 241 FYTNKISDFLSLKAAAV 257
           FYTNKISDFLSLKAAAV
Sbjct: 353 FYTNKISDFLSLKAAAV 369

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
TAIR|locus:2147371	362	PGLP1 "2-phosphoglycolate phos	1.0	0.709	0.828	5.8e-114
TAIR|locus:2149099	362	AT5G36790 [Arabidopsis thalian	1.0	0.709	0.828	5.8e-114
TAIR|locus:2160937	301	PGLP2 "2-phosphoglycolate phos	0.980	0.837	0.612	9.1e-84
GENEDB_PFALCIPARUM|PF07_0059	322	PF07_0059 "4-nitrophenylphosph	0.964	0.770	0.405	1.9e-44
UNIPROTKB|Q8IBV0	322	PF07_0059 "4-nitrophenylphosph	0.964	0.770	0.405	1.9e-44
DICTYBASE|DDB_G0284737	303	DDB_G0284737 "putative phospho	0.926	0.785	0.370	6.8e-40
ASPGD|ASPL0000040358	308	AN2970 [Emericella nidulans (t	0.957	0.798	0.355	2.8e-34
ZFIN|ZDB-GENE-030131-6240	306	pgp "phosphoglycolate phosphat	0.957	0.803	0.354	3.6e-34
SGD|S000002395	312	PHO13 "Alkaline phosphatase sp	0.964	0.794	0.352	4.6e-34
ZFIN|ZDB-GENE-080723-69	308	zgc:194409 "zgc:194409" [Danio	0.961	0.801	0.346	7.4e-34

TAIR|locus:2147371 PGLP1 "2-phosphoglycolate phosphatase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
 Identities = 213/257 (82%), Positives = 225/257 (87%)

Query:     1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSIDFPKDKK 60
             MLR+KGKRLVFVTNNSTKSRKQYGKKFETLGL V EEEI         YL+SI+FPKDKK
Sbjct:   106 MLRAKGKRLVFVTNNSTKSRKQYGKKFETLGLNVNEEEIFASSFAAAAYLQSINFPKDKK 165

Query:    61 VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
             VYV+GE+GILKELELAGFQYLGGP+DG ++IELKPGFLMEHD DVGAVVVGFDRYFNYYK
Sbjct:   166 VYVIGEEGILKELELAGFQYLGGPDDGKRQIELKPGFLMEHDHDVGAVVVGFDRYFNYYK 225

Query:   121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
             +QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA VGSTQREPLVVGKPSTF
Sbjct:   226 IQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGALVGSTQREPLVVGKPSTF 285

Query:   181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQSPNNSIQPD 240
             MMDYLA+KFGIQKSQICMVGDRLDTDILFGQNGGCK              +SP N IQPD
Sbjct:   286 MMDYLADKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSISMLESPENKIQPD 345

Query:   241 FYTNKISDFLSLKAAAV 257
             FYT+KISDFLS KAA V
Sbjct:   346 FYTSKISDFLSPKAATV 362

GO:0008152 "metabolic process" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=ISS;IMP

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

TAIR|locus:2149099 AT5G36790 [Arabidopsis thaliana (taxid:3702)]

 Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
 Identities = 213/257 (82%), Positives = 225/257 (87%)

Query:     1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSIDFPKDKK 60
             MLR+KGKRLVFVTNNSTKSRKQYGKKFETLGL V EEEI         YL+SI+FPKDKK
Sbjct:   106 MLRAKGKRLVFVTNNSTKSRKQYGKKFETLGLNVNEEEIFASSFAAAAYLQSINFPKDKK 165

Query:    61 VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
             VYV+GE+GILKELELAGFQYLGGP+DG ++IELKPGFLMEHD DVGAVVVGFDRYFNYYK
Sbjct:   166 VYVIGEEGILKELELAGFQYLGGPDDGKRQIELKPGFLMEHDHDVGAVVVGFDRYFNYYK 225

Query:   121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
             +QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA VGSTQREPLVVGKPSTF
Sbjct:   226 IQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGALVGSTQREPLVVGKPSTF 285

Query:   181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQSPNNSIQPD 240
             MMDYLA+KFGIQKSQICMVGDRLDTDILFGQNGGCK              +SP N IQPD
Sbjct:   286 MMDYLADKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSISMLESPENKIQPD 345

Query:   241 FYTNKISDFLSLKAAAV 257
             FYT+KISDFLS KAA V
Sbjct:   346 FYTSKISDFLSPKAATV 362

GO:0008152 "metabolic process" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

TAIR|locus:2160937 PGLP2 "2-phosphoglycolate phosphatase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
 Identities = 155/253 (61%), Positives = 187/253 (73%)

Query:     1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIXXXXXXXXXYLKSIDFPKDK 59
             ++RSKGK +VFVTNNS KSR+QY +KF +LG+T +T++EI         YLK  +FPKDK
Sbjct:    45 LIRSKGKNVVFVTNNSVKSRRQYAEKFRSLGVTSITQDEIFSSSFAAAMYLKVNNFPKDK 104

Query:    60 KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY 119
             KVYV+G +G+L+EL++AGF  LGGPEDG KK + K   L EHDK VGAVVVG D   NYY
Sbjct:   105 KVYVIGGEGVLEELQIAGFTGLGGPEDGEKKAQWKSNSLFEHDKSVGAVVVGLDPNINYY 164

Query:   120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPST 179
             K+QYGTLC+RENPGCLFIATNRDAV H+TD QEW G G MV A  GST+REP+VVGKPST
Sbjct:   165 KLQYGTLCVRENPGCLFIATNRDAVGHMTDLQEWPGAGCMVAAMCGSTEREPIVVGKPST 224

Query:   180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQSPNNSIQP 239
             FMMD+L  KFG + S++CMVGDRLDTDILFGQN GCK                  N I+P
Sbjct:   225 FMMDFLLQKFGTETSRMCMVGDRLDTDILFGQNAGCKTLLVLTGVTSESNLLDKGNKIEP 284

Query:   240 DFYTNKISDFLSL 252
             D+YT+ +SD + L
Sbjct:   285 DYYTSTVSDIIKL 297

GO:0008152 "metabolic process" evidence=IEA

GO:0008967 "phosphoglycolate phosphatase activity" evidence=ISS

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GENEDB_PFALCIPARUM|PF07_0059 PF07_0059 "4-nitrophenylphosphatase, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 103/254 (40%), Positives = 146/254 (57%)

Query:     1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIXXXXXXXXXYL--KSIDFPK 57
             +LR +GK++ F+TNNSTKSR  + +KF  LG T V  E I         YL  K     +
Sbjct:    71 LLR-EGKKVYFITNNSTKSRASFLEKFHKLGFTNVKREHIICTAYAVTKYLYDKEEYRLR 129

Query:    58 DKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFN 117
              KK+YV+GE GI  EL+ +   +LGG  D  KKI LK    +  DK++GAVVVG D   N
Sbjct:   130 KKKIYVIGEKGICDELDASNLDWLGGSNDNDKKIILKDDLEIIVDKNIGAVVVGIDFNIN 189

Query:   118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKP 177
             YYK+QY  LCI E     FIATN+DA  + T  Q+WAG G++V +    + ++P+VVGKP
Sbjct:   190 YYKIQYAQLCINEL-NAEFIATNKDATGNFTSKQKWAGTGAIVSSIEAVSLKKPIVVGKP 248

Query:   178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQSPNN-S 236
             + +M++ +     I  S++ M+GDRL+TDI F +N   K               + N+ +
Sbjct:   249 NVYMIENVLKDLNIHHSKVVMIGDRLETDIHFAKNCNIKSILVSTGVTNANIYLNHNSLN 308

Query:   237 IQPDFYTNKISDFL 250
             I PD++   IS+ L
Sbjct:   309 IHPDYFMKSISELL 322

GO:0003869 "4-nitrophenylphosphatase activity" evidence=ISS

UNIPROTKB|Q8IBV0 PF07_0059 "4-nitrophenylphosphatase, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 103/254 (40%), Positives = 146/254 (57%)

Query:     1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIXXXXXXXXXYL--KSIDFPK 57
             +LR +GK++ F+TNNSTKSR  + +KF  LG T V  E I         YL  K     +
Sbjct:    71 LLR-EGKKVYFITNNSTKSRASFLEKFHKLGFTNVKREHIICTAYAVTKYLYDKEEYRLR 129

Query:    58 DKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFN 117
              KK+YV+GE GI  EL+ +   +LGG  D  KKI LK    +  DK++GAVVVG D   N
Sbjct:   130 KKKIYVIGEKGICDELDASNLDWLGGSNDNDKKIILKDDLEIIVDKNIGAVVVGIDFNIN 189

Query:   118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKP 177
             YYK+QY  LCI E     FIATN+DA  + T  Q+WAG G++V +    + ++P+VVGKP
Sbjct:   190 YYKIQYAQLCINEL-NAEFIATNKDATGNFTSKQKWAGTGAIVSSIEAVSLKKPIVVGKP 248

Query:   178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQSPNN-S 236
             + +M++ +     I  S++ M+GDRL+TDI F +N   K               + N+ +
Sbjct:   249 NVYMIENVLKDLNIHHSKVVMIGDRLETDIHFAKNCNIKSILVSTGVTNANIYLNHNSLN 308

Query:   237 IQPDFYTNKISDFL 250
             I PD++   IS+ L
Sbjct:   309 IHPDYFMKSISELL 322

GO:0003869 "4-nitrophenylphosphatase activity" evidence=ISS

DICTYBASE|DDB_G0284737 DDB_G0284737 "putative phosphoric monoester hydrolase" [Dictyostelium discoideum (taxid:44689)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 93/251 (37%), Positives = 141/251 (56%)

Query:     6 GKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSIDFPKD-KKVYVV 64
             GK+++FVTNNSTK+R+Q+ +K ++  +    +E+         YL  I+FPK+ KKV+++
Sbjct:    55 GKKILFVTNNSTKTRQQFLEKIKSFNIEAFIDEVYGSSYGAAIYLNQINFPKETKKVFII 114

Query:    65 GEDGILKELELAGFQYLGGPEDGGKKI-ELKPGF-LMEH---DKDVGAVVVGFDRYFNYY 119
             GE G+ KEL    F+ +       K+I +LK G   +++   DKDVGAV+VG D    + 
Sbjct:   115 GEHGLEKELNDQNFKTI-------KEINKLKDGLDSVQNTAIDKDVGAVIVGMDTQLTFQ 167

Query:   120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPST 179
             K  Y  +CI+E  GCLFIATN D    + + +   G GS+V     ST  +P+ +GKP T
Sbjct:   168 KATYAHMCIKEIEGCLFIATNPDTSYPVKNEKTLPGAGSIVAMIQTSTGVKPITIGKPET 227

Query:   180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQSPNNSIQP 239
              ++D +  K  +   +   VGDRLDTDI F  NGG +               + ++ I P
Sbjct:   228 LLLDVILKKDNLNPERTLFVGDRLDTDIAFAVNGGIRSLLVLTGISKLNEINNIDSKINP 287

Query:   240 DFYTNKISDFL 250
             ++YTN I+D L
Sbjct:   288 NYYTNTIADLL 298

GO:0016791 "phosphatase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016311 "dephosphorylation" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

ASPGD|ASPL0000040358 AN2970 [Emericella nidulans (taxid:162425)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 92/259 (35%), Positives = 136/259 (52%)

Query:     1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSI-DFPKDK 59
             +LRS+GK++VFVTNNSTKSR  Y +K ETLG+  T EEI         Y+  I + P +K
Sbjct:    50 LLRSRGKQVVFVTNNSTKSRADYKRKLETLGIPATTEEIFSSSYSASIYISRILNLPANK 109

Query:    60 -KVYVVGEDGILKELELAGFQYLGGPEDGGKK-IELKPGFLMEH------DKDVGAVVVG 111
              KV+V+GE GI +EL      ++GG +   ++ I  +   L+        D +VG V+VG
Sbjct:   110 RKVFVLGETGIEQELRSENVPFIGGTDPSYRRDITAEDYKLIAAGDESLLDPEVGVVLVG 169

Query:   112 FDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP 171
              D + NY K+      IR   G +F+ATN D+ T       + G G++    +    R+P
Sbjct:   170 LDFHLNYLKLALAYHYIRR--GAVFLATNIDS-TLPNSGTLFPGAGTVSAPLILMVGRDP 226

Query:   172 LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQ 231
             + +GKP+  MMD +  KF + +++ CMVGDR +TDI FG  G                  
Sbjct:   227 VALGKPNQAMMDAIEGKFQLDRARACMVGDRANTDIRFGLEGNL-GGTLGVLTGVSSKED 285

Query:   232 SPNNSIQPDFYTNKISDFL 250
                  ++P  Y +K+SD L
Sbjct:   286 FVEGVVRPSAYLDKLSDLL 304

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003869 "4-nitrophenylphosphatase activity" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0046196 "4-nitrophenol catabolic process" evidence=IEA

ZFIN|ZDB-GENE-030131-6240 pgp "phosphoglycolate phosphatase" [Danio rerio (taxid:7955)]

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 94/265 (35%), Positives = 140/265 (52%)

Query:     2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSIDFPKDKKV 61
             L+  GK++ FVTNNSTK+R+ Y  K   LG     +E+         YLK++    D KV
Sbjct:    49 LKKHGKQVFFVTNNSTKTRQMYADKLGKLGFDAAADEVFGTAYCSAQYLKNV-CKLDGKV 107

Query:    62 YVVGEDGILKELELAGFQYLG-GPE-DGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY 119
             Y++G   + +ELE  G Q +G GP+   G +I+     L   D++V AV+VGFD +F+Y 
Sbjct:   108 YLIGSKAMKQELEEVGIQPVGVGPDLISGVQIDWANVPL---DQEVQAVLVGFDEHFSYM 164

Query:   120 KVQYGT--LCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKP 177
             K+      LC   +P C F+ TN D    L   +   G G ++ A   + QR+  VVGKP
Sbjct:   165 KLNRALQYLC---DPDCQFVGTNTDTRLPLEGGKAVPGTGCLLRAVETAAQRQAQVVGKP 221

Query:   178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQSPNNS- 236
             S FM + +A++F ++  +  MVGDRLDTDI+ G N G K              ++   S 
Sbjct:   222 SNFMFECVASQFNLKPQRCLMVGDRLDTDIMLGSNCGLKTLLTLTGVSTVAEAEANQKSE 281

Query:   237 ------IQPDFYTNKISDFL-SLKA 254
                   + PD+Y + I+D L +L+A
Sbjct:   282 CPQKQRMVPDYYIDSIADILPALQA 306

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

SGD|S000002395 PHO13 "Alkaline phosphatase specific for p-nitrophenyl phosphate" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 92/261 (35%), Positives = 137/261 (52%)

Query:     1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSIDF----P 56
             +L+  GK+L+FVTNNSTKSR  Y KKF + G+ V EE+I         Y++  DF    P
Sbjct:    51 LLKQLGKQLIFVTNNSTKSRLAYTKKFASFGIDVKEEQIFTSGYASAVYIR--DFLKLQP 108

Query:    57 KDKKVYVVGEDGILKELELAGFQYLGGPEDG-GKKIEL-KPGFLMEH-DKDVGAVVVGFD 113
                KV+V GE GI +EL+L G++ LGG +       +  K  FL+   DKDV  V+ G D
Sbjct:   109 GKDKVWVFGESGIGEELKLMGYESLGGADSRLDTPFDAAKSPFLVNGLDKDVSCVIAGLD 168

Query:   114 RYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLV 173
                NY+++   TL   +     F+ TN D+ T       + G GSM+ +   S+ R P  
Sbjct:   169 TKVNYHRLAV-TLQYLQKDSVHFVGTNVDS-TFPQKGYTFPGAGSMIESLAFSSNRRPSY 226

Query:   174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXX--XXQ 231
              GKP+  M++ + + F + +S+ CMVGDRL+TD+ FG  GG                  +
Sbjct:   227 CGKPNQNMLNSIISAFNLDRSKCCMVGDRLNTDMKFGVEGGLGGTLLVLSGIETEERALK 286

Query:   232 SPNNSIQPDFYTNKISDFLSL 252
               ++  +P FY +K+ D  +L
Sbjct:   287 ISHDYPRPKFYIDKLGDIYTL 307

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0003869 "4-nitrophenylphosphatase activity" evidence=IEA;IDA

GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0004035 "alkaline phosphatase activity" evidence=IDA

GO:0006470 "protein dephosphorylation" evidence=IDA

ZFIN|ZDB-GENE-080723-69 zgc:194409 "zgc:194409" [Danio rerio (taxid:7955)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 90/260 (34%), Positives = 131/260 (50%)

Query:     1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIXXXXXXXXXYLKSIDFPKDK 59
             +L+ +GKR+ FVTNN T+ R+ Y +KF  LG   V EEEI         YL+ +   + K
Sbjct:    50 LLKQRGKRVFFVTNNCTRPRENYVQKFSRLGFADVAEEEIFSSAYCSAAYLRDVARLQGK 109

Query:    60 KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY 119
              VY +G  G+LKEL  AG   +  P +  +   +   +    D DV AV+VG+D  F + 
Sbjct:   110 -VYAIGGGGVLKELRDAGVPVVEEPAEQEEGTSI---YNCPLDPDVRAVLVGYDESFTFM 165

Query:   120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPST 179
             K+     C   +  CLF+AT+ D    L   +   G GS+  A   ++ R+  V+GKPS 
Sbjct:   166 KLAKAC-CYLRDAECLFLATDPDPWHPLRGGRITPGSGSLTAALETASSRKATVIGKPSR 224

Query:   180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQ------SP 233
             FM D ++++F +  S+  M+GDRL+TDILFG N G                Q      SP
Sbjct:   225 FMFDCISSQFDLDPSRSLMIGDRLETDILFGSNCGLSTVLTLTGVSTLDEAQRYRDSQSP 284

Query:   234 NNS-IQPDFYTNKISDFLSL 252
                   PDF    ++DFL +
Sbjct:   285 EQKDCAPDFVVESVADFLQV 304

GO:0016787 "hydrolase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2FZX0	NAGD_STAA8	No assigned EC number	0.3083	0.8326	0.8262	yes	no
Q5HHF6	NAGD_STAAC	No assigned EC number	0.3083	0.8326	0.8262	yes	no
Q7A6K4	NAGD_STAAN	No assigned EC number	0.3083	0.8326	0.8262	yes	no
Q7A1D4	NAGD_STAAW	No assigned EC number	0.3083	0.8326	0.8262	yes	no
Q99VE8	NAGD_STAAM	No assigned EC number	0.3083	0.8326	0.8262	yes	no
Q6GIF9	NAGD_STAAR	No assigned EC number	0.3083	0.8326	0.8262	yes	no
Q6GAZ7	NAGD_STAAS	No assigned EC number	0.3083	0.8326	0.8262	yes	no
O32125	YUTF_BACSU	3, ., -, ., -, ., -	0.3375	0.8210	0.8242	yes	no
Q00472	PNPP_SCHPO	3, ., 1, ., 3, ., 4, 1	0.3503	0.9377	0.8087	yes	no
Q2YWR1	NAGD_STAAB	No assigned EC number	0.3083	0.8326	0.8262	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.766

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.X.1500.1	SubName- Full=Putative uncharacterized protein; (303 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	fgenesh4_pg.C_scaffold_120000092	hypothetical protein (308 aa)			•						0.461

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	257
PLN02645	311	PLN02645, PLN02645, phosphoglycolate phosphatase	0.0
TIGR01452	279	TIGR01452, PGP_euk, phosphoglycolate/pyridoxal pho	1e-109
COG0647	269	COG0647, NagD, Predicted sugar phosphatases of the	7e-62
TIGR01460	236	TIGR01460, HAD-SF-IIA, Haloacid Dehalogenase Super	4e-55
TIGR01457	249	TIGR01457, HAD-SF-IIA-hyp2, HAD-superfamily subfam	4e-38
pfam13344	101	pfam13344, Hydrolase_6, Haloacid dehalogenase-like	2e-27
PRK10444	248	PRK10444, PRK10444, UMP phosphatase; Provisional	1e-24
pfam13242	74	pfam13242, Hydrolase_like, HAD-hyrolase-like	9e-20
TIGR01458	257	TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfam	2e-11
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	6e-11
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	7e-08
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	6e-07
COG0241	181	COG0241, HisB, Histidinol phosphatase and related	4e-06
TIGR01668	170	TIGR01668, YqeG_hyp_ppase, HAD superfamily (subfam	5e-06
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	7e-06
TIGR01662	132	TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase,	1e-05
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	2e-05
COG2179	175	COG2179, COG2179, Predicted hydrolase of the HAD s	3e-05
PRK06769	173	PRK06769, PRK06769, hypothetical protein; Validate	9e-05
PRK08942	181	PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate p	2e-04
PRK13222	226	PRK13222, PRK13222, phosphoglycolate phosphatase;	2e-04
PRK13288	214	PRK13288, PRK13288, pyrophosphatase PpaX; Provisio	2e-04
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	0.001
pfam09419	166	pfam09419, PGP_phosphatase, Mitochondrial PGP phos	0.001

>gnl|CDD|178251 PLN02645, PLN02645, phosphoglycolate phosphatase

 Score =  556 bits (1435), Expect = 0.0
 Identities = 231/257 (89%), Positives = 243/257 (94%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
           MLRS GK+LVFVTNNSTKSR QYGKKFE+LGL VTEEEIF+SSFAAAAYLKSI+FPKDKK
Sbjct: 55  MLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSFAAAAYLKSINFPKDKK 114

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYV+GE+GIL+ELELAGFQYLGGPEDG KKIELKPGFLMEHDKDVGAVVVGFDRY NYYK
Sbjct: 115 VYVIGEEGILEELELAGFQYLGGPEDGDKKIELKPGFLMEHDKDVGAVVVGFDRYINYYK 174

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           +QY TLCIRENPGCLFIATNRDAVTHLTDAQEWAG GSMVGA  GST+REPLVVGKPSTF
Sbjct: 175 IQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTF 234

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           MMDYLANKFGI+KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS SML SP N IQPD
Sbjct: 235 MMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPD 294

Query: 241 FYTNKISDFLSLKAAAV 257
           FYT+KISDFL+LKAA V
Sbjct: 295 FYTSKISDFLTLKAATV 311

Length = 311

>gnl|CDD|233420 TIGR01452, PGP_euk, phosphoglycolate/pyridoxal phosphate phosphatase family

 Score =  315 bits (809), Expect = e-109
 Identities = 109/253 (43%), Positives = 151/253 (59%), Gaps = 8/253 (3%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKS-IDFPKDK 59
            L   GK  +FVTNNSTKSR +Y  KF  LG     E++F+S+  AA  L+   D PK  
Sbjct: 29  RLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSALCAARLLRQPPDAPK-- 86

Query: 60  KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY 119
            VYV+GE+G+  EL+ AG +  G P  G        G  M+ +++VGAVVVG+D +F+Y 
Sbjct: 87  AVYVIGEEGLRAELDAAGIRLAGDPSAGDGAAPRGSGAFMKLEENVGAVVVGYDEHFSYA 146

Query: 120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPST 179
           K++     +RE PGCLF+ATNRD    L+D     G GS+V A   ++ R+PLVVGKPS 
Sbjct: 147 KLREACAHLRE-PGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSP 205

Query: 180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL----SMLQSPNN 235
           +M + +   F I  ++  MVGDRL+TDILFG   G  T+LVLSGV+ L      L +  +
Sbjct: 206 YMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQH 265

Query: 236 SIQPDFYTNKISD 248
            + PD+    ++D
Sbjct: 266 DLVPDYVVESLAD 278

PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In mammals, PGP is found in many tissues, notably in red blood cells where P-glycolate is and important activator of the hydrolysis of 2,3-bisphosphoglycerate, a major modifier of the oxygen affinity of hemoglobin. Pyridoxal phosphate (PLP, Vitamin B6) phosphatase is involved in the degradation of PLP in mammals and is widely distributed in human tissues including erythrocyes. The enzymes described here are members of the Haloacid dehalogenase superfamily of hydrolase enzymes (pfam00702). Unlike the bacterial PGP equivalog (TIGR01449), which is a member of class (subfamily) I, these enzymes are members of class (subfamily) II. These two families have almost certainly arisen from convergent evolution (although these two ancestors may themselves have diverged from a more distant HAD superfamily progenitor). The primary seed sequence for this model comes from Chlamydomonas reinhardtii, a photosynthetic alga. The enzyme has been purified and characterized and these data are fully consistent with the assignment of function as a PGPase involved in photorespiration. The second seed, from Homo sapiens chromosome 22 has been characterized as a pyridoxal phosphatase. Biochemical characterization of partially purified PGP's from various tissues including red blood cells have been performed while one gene for PGP has been localized to chromosome 16p13.3. The sequence used here maps to chromosome 22. There is indeed a related gene on chromosome 16 (and it is expressed, since EST's are found) which shows 46% identity and 59% positives by BLAST2 (E=1e-66). The chromosome 16 gene is not in evidence in nraa but translated from the genomic sequence would score 372.4 (E=7.9e-113) versus This model, well above trusted. The third seed, from C. elegans, is only supported by sequence similarity. This model is limited to eukaryotic species including S. pombe and S. cerevisiae, although several archaea score between the trusted and noise cutoffs. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase d. Length = 279

>gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

 Score =  195 bits (497), Expect = 7e-62
 Identities = 91/248 (36%), Positives = 130/248 (52%), Gaps = 24/248 (9%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLG-LTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
           L++ GK ++F+TNNST+SR+    +  +LG + VT ++I  S  A A YL        KK
Sbjct: 36  LKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATADYLA--KQKPGKK 93

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYV+GE+G+ +ELE AGF+ +   E                   V AVVVG DR   Y K
Sbjct: 94  VYVIGEEGLKEELEGAGFELVDEEEPA----------------RVDAVVVGLDRTLTYEK 137

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           +    L I    G  FIATN D            G G++      +T REP V+GKPS  
Sbjct: 138 LAEALLAIAA--GAPFIATNPDLTVPTERGLRP-GAGAIAALLEQATGREPTVIGKPSPA 194

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           + +    K G+ +S++ MVGDRLDTDIL  +  G  TLLVL+GV+S   L      ++P 
Sbjct: 195 IYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDL--DRAEVKPT 252

Query: 241 FYTNKISD 248
           +  + +++
Sbjct: 253 YVVDSLAE 260

Length = 269

>gnl|CDD|233422 TIGR01460, HAD-SF-IIA, Haloacid Dehalogenase Superfamily Class (subfamily) IIA

 Score =  176 bits (449), Expect = 4e-55
 Identities = 74/225 (32%), Positives = 110/225 (48%), Gaps = 15/225 (6%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETL-GLTVTEEEIFASSFAAAAYLKSIDFPKDK 59
            LR+KGK +VF+TNNS++S + Y +K  +L G+ V+ ++I  S       L+     +  
Sbjct: 25  RLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGSVTKDLLRQRFEGE-- 82

Query: 60  KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY 119
           KVYV+G   + + LE  GF+            +      +  +K   AV+VG    F+Y 
Sbjct: 83  KVYVIGVGELRESLEGLGFRN--------DFFDDID--HLAIEKIPAAVIVGEPSDFSYD 132

Query: 120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPST 179
           ++      + E     FIA NRD +  L D +   G G++       + REP VVGKPS 
Sbjct: 133 ELAKAAYLLAEGD-VPFIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSP 191

Query: 180 FMMDYLANKFGIQKSQIC-MVGDRLDTDILFGQNGGCKTLLVLSG 223
            +     N    +  +   MVGD L TDIL  +N G  TLLVL+G
Sbjct: 192 AIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236

This model represents one structural subclass of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The classes are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Class I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Class II consists of sequences in which the capping domain is found between the second and third motifs. Class III sequences have no capping domain in iether of these positions. The Class IIA capping domain is predicted by PSI-PRED to consist of a mixed alpha-beta fold with the basic pattern: Helix-Helix-Helix-Sheet-Helix-Loop-Sheet-Helix-Sheet- Helix. Presently, this subfamily encompasses a single equivalog model (TIGR01452) for the eukaryotic phosphoglycolate phosphatase, as well as four hypothetical equivalogs covering closely related sequences (TIGR01456 and TIGR01458 in eukaryotes, TIGR01457 in gram positive bacteria and TIGR01459 in gram negative bacteria). The Escherishia coli NagD gene and the Bacillus subtilus AraL gene are members of this subfamily but are not members of the any of the presently defined equivalogs within it. NagD is part of the NAG operon responsible for N-acetylglucosamine metabolism. The function of this gene is unknown. Genes from several organisms have been annotated as NagD, or NagD-like. However, without data on the presence of other members of this pathway, (such as in the case of Yersinia pestis) these assignments should not be given great weight. The AraL gene is similar: it is part of the L-arabinose operon, but the function is unknown. A gene from Halobacterium has been annotated as AraL, but no other Ara operon genes have been annotated. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant [Unknown function, Enzymes of unknown specificity]. Length = 236

>gnl|CDD|130524 TIGR01457, HAD-SF-IIA-hyp2, HAD-superfamily subfamily IIA hydrolase, TIGR01457

 Score =  133 bits (336), Expect = 4e-38
 Identities = 75/224 (33%), Positives = 107/224 (47%), Gaps = 25/224 (11%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKV 61
           L+ +G   +FVTNNST++ +Q   K  +  +  TEE++F +S A A Y+      KD  V
Sbjct: 29  LKKRGVPYLFVTNNSTRTPEQVADKLVSFDIPATEEQVFTTSMATAQYIA--QQKKDASV 86

Query: 62  YVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKV 121
           YV+GE+G+ + ++  G                    L    ++   VVVG DR   Y K 
Sbjct: 87  YVIGEEGLREAIKENG--------------------LTFGGENPDYVVVGLDRSITYEKF 126

Query: 122 QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFM 181
               L IR   G  FI+TN D     T+     G GS+      ST  +P+ +GKP + +
Sbjct: 127 AVACLAIRN--GARFISTNGDIAIP-TERGLLPGNGSLTSVLTVSTGVKPVFIGKPESII 183

Query: 182 MDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVT 225
           M+      G    +  MVGD   TDI+ G N G  TLLV +GVT
Sbjct: 184 MEQAMRVLGTDVEETLMVGDNYATDIMAGINAGIDTLLVHTGVT 227

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in This model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those [Unknown function, Enzymes of unknown specificity]. Length = 249

>gnl|CDD|205524 pfam13344, Hydrolase_6, Haloacid dehalogenase-like hydrolase

 Score =  100 bits (253), Expect = 2e-27
 Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 2/79 (2%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
            LR+ GK +VFVTNNS++SR+QY KK   LG  V E+E+  S+ AAA YLK   F   KK
Sbjct: 25  ALRAAGKPVVFVTNNSSRSREQYAKKLRKLGFDVDEDEVITSATAAADYLKERKF--GKK 82

Query: 61  VYVVGEDGILKELELAGFQ 79
           V V+G +G+ +ELE AGF+
Sbjct: 83  VLVIGSEGLREELEEAGFE 101

This family is part of the HAD superfamily. Length = 101

>gnl|CDD|182466 PRK10444, PRK10444, UMP phosphatase; Provisional

 Score = 97.9 bits (244), Expect = 1e-24
 Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 29/224 (12%)

Query: 5   KGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVV 64
           KG  LV +TN  +++ +    +F T G+ V +   + S+ A A +L+  +    KK YV+
Sbjct: 32  KGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQE---GKKAYVI 88

Query: 65  GEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYG 124
           GE  ++ EL  AGF             ++ P F          V+VG  R +N+  +   
Sbjct: 89  GEGALIHELYKAGFTI----------TDINPDF----------VIVGETRSYNWDMMHKA 128

Query: 125 TLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDY 184
              +    G  FIATN D  TH      +   G++       + R+P  VGKPS +++  
Sbjct: 129 AYFVAN--GARFIATNPD--TH--GRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRA 182

Query: 185 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS 228
             NK      +  +VGD L TDIL G   G +T+LVLSGV++L 
Sbjct: 183 ALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLD 226

Length = 248

>gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like

 Score = 80.4 bits (199), Expect = 9e-20
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 173 VVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQS 232
           V GKP+  M+     + G+   +  M+GD  DTDIL  +  G +T+LVL+GVT+   L+ 
Sbjct: 1   VCGKPNPGMLRAALERLGVDPEECVMIGDS-DTDILAARAAGIRTILVLTGVTTAEDLER 59

Query: 233 PNNSIQPDFYTNKISD 248
                +PD+  + ++D
Sbjct: 60  A--PGRPDYVVDSLAD 73

Length = 74

>gnl|CDD|162372 TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfamily IIA hydrolase, TIGR01458

 Score = 61.8 bits (150), Expect = 2e-11
 Identities = 52/252 (20%), Positives = 97/252 (38%), Gaps = 32/252 (12%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKV 61
           LR    ++ FVTN + +S++   ++ + LG  ++E+E+F  + AA   L+     K  + 
Sbjct: 33  LRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPAPAARQLLEE----KQLRP 88

Query: 62  YVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGF-DRYFNYYK 120
            ++ +D +L + +  G                          D   VV+G    +F+Y  
Sbjct: 89  MLLVDDRVLPDFD--GID----------------------TSDPNCVVMGLAPEHFSYQI 124

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           +      + +    + IA  +       D       G  V A   +T  +  VVGKPS  
Sbjct: 125 LNQAFRLLLDGAKPVLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKT 183

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
                    G +  +  M+GD    D+   Q+ G + + V +G    S  +  N  + PD
Sbjct: 184 FFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKIN--VPPD 241

Query: 241 FYTNKISDFLSL 252
              + +   + L
Sbjct: 242 LTCDSLPHAVDL 253

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published [Unknown function, Enzymes of unknown specificity]. Length = 257

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 58.5 bits (142), Expect = 6e-11
 Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 13/98 (13%)

Query: 135 LFIATNR---DAVTHLTDAQEW---------AGGGSMVGAFVGSTQREPLVVGKPSTFMM 182
           L +ATN+   + +  L +              G               P  +GKP+   +
Sbjct: 43  LALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL 102

Query: 183 DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 220
                  G+   ++ MVGD L  DI   +  G   + V
Sbjct: 103 LAALKLLGVDPEEVLMVGDSL-NDIEMAKAAGGLGVAV 139

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 51.3 bits (123), Expect = 7e-08
 Identities = 31/122 (25%), Positives = 44/122 (36%), Gaps = 13/122 (10%)

Query: 135 LFIATN--RDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ 192
           L I TN     +  L  A    G        VG      +   KP    +  L  K G+ 
Sbjct: 108 LGIVTNKPERELDILLKA---LGLADYFDVIVGGDD---VPPPKPDPEPLLLLLEKLGLD 161

Query: 193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSL 252
             +  MVGD L+ DIL  +  G   + V  G  S   L         D   + +++ L+L
Sbjct: 162 PEEALMVGDSLN-DILAAKAAGVPAVGVTWGYNSREELA----QAGADVVIDSLAELLAL 216

Query: 253 KA 254
            A
Sbjct: 217 LA 218

Length = 220

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 47.4 bits (113), Expect = 6e-07
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKV 61
           L+ KG +L   TN   KSR++  +  E LGL    + +  S+ AA  Y K   F      
Sbjct: 36  LKEKGIKLALATN---KSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPF 92

Query: 62  YVVGED-----GILKELEL 75
            +   +       LK L +
Sbjct: 93  DIGKPNPDKLLAALKLLGV 111

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|223319 COG0241, HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

 Score = 45.7 bits (109), Expect = 4e-06
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 223
           KP   M+     ++ I  S+  +VGDRL TD+   +N G K +LVL+G
Sbjct: 105 KPKPGMLLSALKEYNIDLSRSYVVGDRL-TDLQAAENAGIKGVLVLTG 151

Length = 181

>gnl|CDD|233519 TIGR01668, YqeG_hyp_ppase, HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

 Score = 45.1 bits (107), Expect = 5e-06
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 189 FGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQS 232
            G+   Q+ +VGDRL TD++ G   G  T+LV   V        
Sbjct: 104 MGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQWFIK 147

This family of hypothetical proteins is a member of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterized members of this subfamily (TIGR01662) and most characterized members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs, all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. Length = 170

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score = 45.7 bits (108), Expect = 7e-06
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP 233
           V KP   + +Y   K G+   +   VGD L+ DIL  +  G KT+ +  G   L     P
Sbjct: 152 VAKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPL-----P 206

Query: 234 NNSIQPDFYTNKISDFLSLKAA 255
           +    PD+   +IS    L   
Sbjct: 207 DALEAPDY---EISSLAELLDL 225

Length = 229

>gnl|CDD|233517 TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase, subfamily IIIA

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 176 KPSTFMMDYLANKF-GIQKSQICMVGDRLDTDILFGQNGGCKTLLV 220
           KP   M      +F  I   +   VGD+  TD+   +  G   +LV
Sbjct: 85  KPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILV 130

This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class III subfamilies are characterized by the lack of any domains located between either between the first and second conserved catalytic motifs (as in the Class I subfamilies, TIGR01493, TIGR01509, TIGR01488 and TIGR01494) or between the second and third conserved catalytic motifs (as in the Class II subfamilies, TIGR01460 and TIGR01484) of the superfamily domain. The IIIA subfamily contains five major clades: histidinol-phosphatase (TIGR01261) and histidinol-phosphatase-related protein (TIGR00213) which together form a subfamily (TIGR01656), DNA 3'-phosphatase (TIGR01663, TIGR01664), YqeG (TIGR01668) and YrbI (TIGR01670). In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme [Unknown function, Enzymes of unknown specificity]. Length = 132

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 12/182 (6%)

Query: 33  TVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIE 92
            V E E      AAAA   +I     + +   G + +++ L L         E+  +   
Sbjct: 18  VVPEAEALLE--AAAALGVAIVIAAGENLTKEGREELVRRLLLRALAGEELLEELLRAGA 75

Query: 93  LKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQE 152
                      D+  + +       Y   +     ++E    L I T  + +T    A+ 
Sbjct: 76  TV-----VAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARL 130

Query: 153 WAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQN 212
                ++V A +       + VGKP   + +    + G++  ++ MVGD +  DI   + 
Sbjct: 131 LGLFDALVSADLYG----LVGVGKPDPKIFELALEELGVKPEEVLMVGDGV-NDIPAAKA 185

Query: 213 GG 214
            G
Sbjct: 186 AG 187

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|225090 COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only]

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 220
            KP          +  +   ++ MVGD+L TD+L G   G +T+LV
Sbjct: 92  KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILV 137

Length = 175

>gnl|CDD|180686 PRK06769, PRK06769, hypothetical protein; Validated

 Score = 41.6 bits (98), Expect = 9e-05
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVL--SGVTSLSMLQSP 233
           KPST M+   A K G+  +Q  ++GDR  TDI+        T+LV   +G  +L   +  
Sbjct: 93  KPSTGMLLQAAEKHGLDLTQCAVIGDRW-TDIVAAAKVNATTILVRTGAGYDALHTYRDK 151

Query: 234 NNSIQPDFYTNKISD 248
              I+P++      D
Sbjct: 152 WAHIEPNYIAENFED 166

Length = 173

>gnl|CDD|236354 PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate phosphatase; Validated

 Score = 40.6 bits (96), Expect = 2e-04
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 223
           KP   M+  +A +  I  +   MVGD L  D+      G   +LV +G
Sbjct: 103 KPKPGMLLSIAERLNIDLAGSPMVGDSLR-DLQAAAAAGVTPVLVRTG 149

Length = 181

>gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional

 Score = 40.9 bits (97), Expect = 2e-04
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 220
           KP    +     K G+   ++  VGD    DI   +  GC ++ V
Sbjct: 149 KPDPAPLLLACEKLGLDPEEMLFVGDSR-NDIQAARAAGCPSVGV 192

Length = 226

>gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 187 NKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI 246
              G +  +  MVGD    DIL G+N G KT  V   +     L+      +PDF  +K+
Sbjct: 149 ELLGAKPEEALMVGDNHH-DILAGKNAGTKTAGVAWTIKGREYLE----QYKPDFMLDKM 203

Query: 247 SDFLSL 252
           SD L++
Sbjct: 204 SDLLAI 209

Length = 214

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 19/55 (34%), Positives = 27/55 (49%)

Query: 169 REPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 223
            E   V KP   +      + G++  +  MVGDRLD DI   +N G KT+ +  G
Sbjct: 143 SEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQG 197

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|220230 pfam09419, PGP_phosphatase, Mitochondrial PGP phosphatase

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 182 MDYLANKFGIQK-SQICMVGDRLDTDILFG-QNGGCKTLL 219
           ++Y   +  + + S+I +VGDRL TDIL     G     L
Sbjct: 122 LEYFKERGVVTRPSEIAVVGDRLFTDILMANMMGSWGVWL 161

This is a family of proteins that acts as a mitochondrial phosphatase in cardiolipin biosynthesis. Cardiolipin is a unique dimeric phosphoglycerolipid predominantly present in mitochondrial membranes. The inverted phosphatase motif includes the highly conserved DKD triad. Length = 166

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	257
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	100.0
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	100.0
PLN02645	311	phosphoglycolate phosphatase	100.0
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	100.0
PRK10444	248	UMP phosphatase; Provisional	100.0
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	100.0
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	100.0
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	100.0
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	100.0
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	100.0
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.97
KOG1618	389	consensus Predicted phosphatase [General function	99.86
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.82
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	99.79
COG0546	220	Gph Predicted phosphatases [General function predi	99.76
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.73
PRK06769	173	hypothetical protein; Validated	99.72
PRK13288	214	pyrophosphatase PpaX; Provisional	99.71
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.7
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.7
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.7
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.7
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.69
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.69
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.69
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.68
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.67
PRK09449	224	dUMP phosphatase; Provisional	99.67
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.66
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.66
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.65
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.63
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.62
PLN02575	381	haloacid dehalogenase-like hydrolase	99.62
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.62
PLN02811	220	hydrolase	99.6
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.59
PRK11587	218	putative phosphatase; Provisional	99.58
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.57
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.57
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.56
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.55
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.54
PLN02940	382	riboflavin kinase	99.54
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.53
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.53
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.5
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.49
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.48
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.46
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.45
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.43
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.41
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.41
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.4
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.39
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.39
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.38
PHA02530	300	pseT polynucleotide kinase; Provisional	99.38
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.37
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.35
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.35
PHA02597	197	30.2 hypothetical protein; Provisional	99.34
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.33
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.32
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.29
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.2
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	99.15
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.12
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.09
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.08
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.01
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.0
PLN02954	224	phosphoserine phosphatase	98.92
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	98.92
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	98.89
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	98.89
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	98.87
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.84
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	98.8
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.7
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.67
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	98.66
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	98.65
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	98.6
PRK13582	205	thrH phosphoserine phosphatase; Provisional	98.58
PTZ00445	219	p36-lilke protein; Provisional	98.51
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	98.49
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.48
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	98.44
PRK11133	322	serB phosphoserine phosphatase; Provisional	98.4
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	98.39
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	98.37
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	98.35
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	98.2
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	98.2
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	98.04
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	97.93
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	97.81
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	97.75
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	97.72
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	97.71
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	97.49
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	97.35
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	97.32
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	97.28
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	97.05
PRK08238	479	hypothetical protein; Validated	96.83
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	96.74
PRK10671	834	copA copper exporting ATPase; Provisional	96.71
COG4229	229	Predicted enolase-phosphatase [Energy production a	96.69
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	96.57
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	96.53
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	96.4
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	96.33
PRK01158	230	phosphoglycolate phosphatase; Provisional	96.21
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	96.01
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	95.86
COG4087	152	Soluble P-type ATPase [General function prediction	95.79
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	95.79
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	95.74
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	95.68
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	95.68
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	95.39
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	95.09
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	94.98
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	94.71
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	94.28
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	93.68
PRK10513	270	sugar phosphate phosphatase; Provisional	93.57
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	93.52
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	93.24
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	92.8
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	92.77
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	92.66
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	92.54
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	92.15
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	92.12
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	91.94
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	91.78
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	91.51
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	91.15
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	91.1
PRK10976	266	putative hydrolase; Provisional	91.02
PLN02645	311	phosphoglycolate phosphatase	90.64
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	90.61
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	90.2
PRK11587	218	putative phosphatase; Provisional	90.2
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	89.9
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	89.77
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	89.74
PRK06769	173	hypothetical protein; Validated	89.69
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	89.59
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	89.52
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	89.47
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	89.4
PLN02887	580	hydrolase family protein	89.4
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	89.33
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	89.18
PRK13288	214	pyrophosphatase PpaX; Provisional	89.16
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	89.03
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	88.65
PLN02580	384	trehalose-phosphatase	88.46
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	88.22
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	87.72
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	87.45
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	87.31
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	87.28
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	87.18
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	87.17
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	87.16
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	87.11
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	86.83
PHA02530	300	pseT polynucleotide kinase; Provisional	86.79
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	86.36
COG0546	220	Gph Predicted phosphatases [General function predi	86.3
PRK14988	224	GMP/IMP nucleotidase; Provisional	86.09
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	85.94
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	85.93
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	85.89
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	85.71
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	85.56
PLN02382	413	probable sucrose-phosphatase	85.46
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	85.29
PRK09449	224	dUMP phosphatase; Provisional	84.74
PRK13222	226	phosphoglycolate phosphatase; Provisional	84.46
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	84.22
PLN02575	381	haloacid dehalogenase-like hydrolase	84.04
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	83.76
PRK13226	229	phosphoglycolate phosphatase; Provisional	82.96
COG3700	237	AphA Acid phosphatase (class B) [General function	82.52
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	82.19
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	81.71
PRK13225	273	phosphoglycolate phosphatase; Provisional	81.4
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	81.4
COG3473	238	Maleate cis-trans isomerase [Secondary metabolites	80.97
PLN02940	382	riboflavin kinase	80.92
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	80.31
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	80.2

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=6.2e-53  Score=351.02  Aligned_cols=253  Identities=55%  Similarity=0.867  Sum_probs=225.0

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCC-CCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCe
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQ   79 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~-~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~   79 (257)
                      +|++.||+++|+||||++|+++|.++++++|+. +.+++|++|+.+++.||+++. +.+++||++|+++++++|+++|++
T Consensus        49 ~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~ssa~~~a~ylk~~~-~~~k~Vyvig~~gi~~eL~~aG~~  127 (306)
T KOG2882|consen   49 LLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIFSSAYAIADYLKKRK-PFGKKVYVIGEEGIREELDEAGFE  127 (306)
T ss_pred             HHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccccChHHHHHHHHHHhC-cCCCeEEEecchhhhHHHHHcCce
Confidence            478999999999999999999999999999999 999999999999999998776 467899999999999999999999


Q ss_pred             eeCCCCCCCCccccCCCcc-cCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCch
Q 025117           80 YLGGPEDGGKKIELKPGFL-MEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGS  158 (257)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~  158 (257)
                      ..+.+.+....-...++.. ...+++|.|||+|+|.+++|.++..|+..|+ ++++.+++||.|...|...+..++|.|+
T Consensus       128 ~~g~~~~~~~~~~~~~~~~~~~~d~~VgAVvvg~D~hfsy~KL~kA~~yLq-nP~clflatn~D~~~p~~~~~~ipG~G~  206 (306)
T KOG2882|consen  128 YFGGGPDGKDTDGAKSFVLSIGLDPDVGAVVVGYDEHFSYPKLMKALNYLQ-NPGCLFLATNRDATTPPTPGVEIPGAGS  206 (306)
T ss_pred             eecCCCCcccccccccchhhcCCCCCCCEEEEecccccCHHHHHHHHHHhC-CCCcEEEeccCccccCCCCCeeccCCcc
Confidence            9876555422100011111 1237789999999999999999999999998 5999999999999888667889999999


Q ss_pred             HHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCC--CCC
Q 025117          159 MVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP--NNS  236 (257)
Q Consensus       159 ~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~--~~~  236 (257)
                      +.+++..++++++.++|||++.++++++++++++|++|+||||++.|||.+|+++|++|+||.+|.++.+++...  +..
T Consensus       207 ~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~  286 (306)
T KOG2882|consen  207 FVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNK  286 (306)
T ss_pred             HHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999987654  556


Q ss_pred             CCCcEEECChhhHHHHHHh
Q 025117          237 IQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       237 ~~pd~~~~~l~el~~~l~~  255 (257)
                      ..|||+++++.++...++.
T Consensus       287 ~~PDyy~~~l~d~~~~~~~  305 (306)
T KOG2882|consen  287 MVPDYYADSLGDLLPLLNN  305 (306)
T ss_pred             CCCchHHhhHHHHhhhccC
Confidence            7899999999999877653

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.1e-48  Score=327.18  Aligned_cols=233  Identities=39%  Similarity=0.608  Sum_probs=211.7

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHh-CCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCe
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQ   79 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~-~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~   79 (257)
                      +|+++|+|++||||||+++++.++++|+. +|+++.+++|+||++++++||++..  ++++||++|+++++++++.+|+.
T Consensus        35 ~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~~~l~~~~--~~~kv~viG~~~l~~~l~~~G~~  112 (269)
T COG0647          35 RLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATADYLAKQK--PGKKVYVIGEEGLKEELEGAGFE  112 (269)
T ss_pred             HHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHHHHHHhhC--CCCEEEEECCcchHHHHHhCCcE
Confidence            37899999999999999999999999999 7778999999999999999998753  44899999999999999999999


Q ss_pred             eeCCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchH
Q 025117           80 YLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSM  159 (257)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~  159 (257)
                      .+...+                +..+++|++|.|+.++|+++.+++..+++  |.++||||+|..++...+ .++|.|++
T Consensus       113 ~~~~~~----------------~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~--g~~fI~tNpD~~~p~~~g-~~pgaGai  173 (269)
T COG0647         113 LVDEEE----------------PARVDAVVVGLDRTLTYEKLAEALLAIAA--GAPFIATNPDLTVPTERG-LRPGAGAI  173 (269)
T ss_pred             EeccCC----------------CCcccEEEEecCCCCCHHHHHHHHHHHHc--CCcEEEeCCCccccCCCC-CccCcHHH
Confidence            875321                12379999999999999999999999985  699999999999987655 88999999


Q ss_pred             HHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCC
Q 025117          160 VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP  239 (257)
Q Consensus       160 ~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~p  239 (257)
                      ...++.++|.++.++|||++.+|+.+++.++.++++++||||++.|||.+|+++||.|++|+||.++.+++..  ...+|
T Consensus       174 ~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~--~~~~p  251 (269)
T COG0647         174 AALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDR--AEVKP  251 (269)
T ss_pred             HHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhh--hccCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999888664  35789


Q ss_pred             cEEECChhhHHHHHHhh
Q 025117          240 DFYTNKISDFLSLKAAA  256 (257)
Q Consensus       240 d~~~~~l~el~~~l~~~  256 (257)
                      +|+.+++.++..++...
T Consensus       252 ~~v~~sl~~~~~~~~~~  268 (269)
T COG0647         252 TYVVDSLAELITALKEL  268 (269)
T ss_pred             cchHhhHHHHHhhhhcc
Confidence            99999999998877654

>PLN02645 phosphoglycolate phosphatase

Probab=100.00  E-value=1.4e-45  Score=321.25  Aligned_cols=257  Identities=90%  Similarity=1.380  Sum_probs=219.1

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCee
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY   80 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~   80 (257)
                      +||++|++++|+|||++++++++.++|+++||++..++|+||+.+++.||++.++.++++||++|+.++.+++++.|+..
T Consensus        55 ~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~  134 (311)
T PLN02645         55 MLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSFAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQY  134 (311)
T ss_pred             HHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHHHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEE
Confidence            37889999999999999999999999999999999999999999999999976654557899999999999999999998


Q ss_pred             eCCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH
Q 025117           81 LGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV  160 (257)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~  160 (257)
                      ..+.++........+....+.++++++|++|+|+.++|+++..++.+++.++|+++|+||+|..++....+..+|.|+++
T Consensus       135 ~~g~~~~~~~~~~~~~~~~~~~~~i~aVvvg~d~~~~~~~l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~  214 (311)
T PLN02645        135 LGGPEDGDKKIELKPGFLMEHDKDVGAVVVGFDRYINYYKIQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMV  214 (311)
T ss_pred             ecCccccccccccccccccccCCCCCEEEEecCCCCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHH
Confidence            76543322111111111123346789999999999999999999999976578999999999976544455788999999


Q ss_pred             HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCc
Q 025117          161 GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD  240 (257)
Q Consensus       161 ~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd  240 (257)
                      +.+..+++.++..+|||+|.+|+.+++++++++++++||||++.+||.+|+++|+++++|.||.++.+++...+....||
T Consensus       215 ~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd  294 (311)
T PLN02645        215 GAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPD  294 (311)
T ss_pred             HHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCC
Confidence            99999999888888999999999999999999999999999988999999999999999999999887764322346899


Q ss_pred             EEECChhhHHHHHHhhC
Q 025117          241 FYTNKISDFLSLKAAAV  257 (257)
Q Consensus       241 ~~~~~l~el~~~l~~~~  257 (257)
                      ++++++.+|.+++++-|
T Consensus       295 ~~~~~~~~l~~~~~~~~  311 (311)
T PLN02645        295 FYTSKISDFLTLKAATV  311 (311)
T ss_pred             EEECCHHHHHHHhhcCC
Confidence            99999999999988654

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=100.00  E-value=1.9e-44  Score=310.01  Aligned_cols=247  Identities=43%  Similarity=0.724  Sum_probs=208.6

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCee
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY   80 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~   80 (257)
                      +|+++|++++|+|||+++++.++.++|+++|+++..++|+||+.+++.||+++.. +++++|++|.++++++|++.|+..
T Consensus        29 ~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~l~~~~~-~~~~v~~iG~~~~~~~l~~~g~~~  107 (279)
T TIGR01452        29 RLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSALCAARLLRQPPD-APKAVYVIGEEGLRAELDAAGIRL  107 (279)
T ss_pred             HHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHHHHHHHHHHhhCc-CCCEEEEEcCHHHHHHHHHCCCEE
Confidence            3788999999999999999999999999999999999999999999999997432 357899999999999999999998


Q ss_pred             eCCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH
Q 025117           81 LGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV  160 (257)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~  160 (257)
                      +..+++...............++++++|++++|.+++|+++.+++..|+. +|+++|+||++..++....+..++.|.++
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Vvv~~d~~~~y~~i~~~l~~L~~-~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~  186 (279)
T TIGR01452       108 AGDPSAGDGAAPRGSGAFMKLEENVGAVVVGYDEHFSYAKLREACAHLRE-PGCLFVATNRDPWHPLSDGSRTPGTGSLV  186 (279)
T ss_pred             ecCcccccccchhhcccccccCCCCCEEEEecCCCCCHHHHHHHHHHHhc-CCCEEEEeCCCCCCCCcCCCcccChHHHH
Confidence            76554432110000111122346799999999999999999999999985 57899999999977644455678999999


Q ss_pred             HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCC----CCC
Q 025117          161 GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP----NNS  236 (257)
Q Consensus       161 ~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~----~~~  236 (257)
                      +.+..+++.+....|||+|.+|+.++++++++|++++||||++.+||++|+++||++++|.||.++.+++...    ...
T Consensus       187 ~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~  266 (279)
T TIGR01452       187 AAIETASGRQPLVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHD  266 (279)
T ss_pred             HHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccC
Confidence            9999888888888899999999999999999999999999998899999999999999999999988876531    234


Q ss_pred             CCCcEEECChhhH
Q 025117          237 IQPDFYTNKISDF  249 (257)
Q Consensus       237 ~~pd~~~~~l~el  249 (257)
                      ..|||+++++.||
T Consensus       267 ~~Pd~~~~~l~~l  279 (279)
T TIGR01452       267 LVPDYVVESLADL  279 (279)
T ss_pred             CCCCEEecccccC
Confidence            6899999999874

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK10444 UMP phosphatase; Provisional

Probab=100.00  E-value=5.6e-44  Score=301.06  Aligned_cols=218  Identities=32%  Similarity=0.539  Sum_probs=198.5

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCee
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY   80 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~   80 (257)
                      +|+++|++++|+|||++++++++.++|+++||++++++|+||+.++++||+++   +++++|++|+.++.++|++.|+..
T Consensus        28 ~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~---~~~~v~~~g~~~l~~~l~~~g~~~  104 (248)
T PRK10444         28 RILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQ---EGKKAYVIGEGALIHELYKAGFTI  104 (248)
T ss_pred             HHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhC---CCCEEEEEcCHHHHHHHHHCcCEe
Confidence            37889999999999999999999999999999999999999999999999975   246899999999999999999875


Q ss_pred             eCCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH
Q 025117           81 LGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV  160 (257)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~  160 (257)
                      .                    ++++++|+++++.+++|.++..++.+++  ++.++|+||+|...+   + ..++.|++.
T Consensus       105 ~--------------------~~~~~~Vvvg~~~~~~~~~l~~a~~~l~--~g~~~i~~n~D~~~~---g-~~~~~G~~~  158 (248)
T PRK10444        105 T--------------------DINPDFVIVGETRSYNWDMMHKAAYFVA--NGARFIATNPDTHGR---G-FYPACGALC  158 (248)
T ss_pred             c--------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHH--CCCEEEEECCCCCCC---C-CcCcHHHHH
Confidence            3                    2457899999999999999999999986  489999999999542   3 578999999


Q ss_pred             HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCc
Q 025117          161 GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD  240 (257)
Q Consensus       161 ~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd  240 (257)
                      +.++.+.|.++...|||+|.+|+.++++++++|++|+||||++.+||.+|+++|+++++|.||.++.+++..  ....||
T Consensus       159 ~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~--~~~~pd  236 (248)
T PRK10444        159 AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDS--MPFRPS  236 (248)
T ss_pred             HHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhc--CCCCCC
Confidence            999999999888889999999999999999999999999999889999999999999999999999887753  347899


Q ss_pred             EEECChhhH
Q 025117          241 FYTNKISDF  249 (257)
Q Consensus       241 ~~~~~l~el  249 (257)
                      ++++++.||
T Consensus       237 ~~~~sl~el  245 (248)
T PRK10444        237 WIYPSVADI  245 (248)
T ss_pred             EEECCHHHh
Confidence            999999997

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=100.00  E-value=1.9e-42  Score=292.67  Aligned_cols=222  Identities=32%  Similarity=0.526  Sum_probs=199.5

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCee
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY   80 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~   80 (257)
                      +|+++|++++|+||||+|+++.+.++|+++|+++..++|+||+.++++||++++  +++++|++|+++++++++++|+..
T Consensus        28 ~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~l~~~~--~~~~v~~lg~~~l~~~l~~~g~~~  105 (249)
T TIGR01457        28 ELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADYMNDLK--LEKTVYVIGEEGLKEAIKEAGYVE  105 (249)
T ss_pred             HHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHHHHhcC--CCCEEEEEcChhHHHHHHHcCCEe
Confidence            378899999999999999999999999999999999999999999999999763  357899999999999999999875


Q ss_pred             eCCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH
Q 025117           81 LGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV  160 (257)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~  160 (257)
                      .                    ++++++|++++++.++|+++..++.+++  +++++|+||+|..++... ...++.|++.
T Consensus       106 ~--------------------~~~~~~Vvvg~~~~~~y~~l~~a~~~l~--~g~~~i~tN~D~~~~~~~-~~~~~~G~~~  162 (249)
T TIGR01457       106 D--------------------KEKPDYVVVGLDRQIDYEKFATATLAIR--KGAHFIGTNGDLAIPTER-GLLPGNGSLI  162 (249)
T ss_pred             c--------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHH--CCCeEEEECCCCCCCCCC-CCCCCcHHHH
Confidence            3                    2457899999999999999999999986  488899999999987543 3568999999


Q ss_pred             HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCc
Q 025117          161 GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD  240 (257)
Q Consensus       161 ~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd  240 (257)
                      ..++.+++.+....+||+|.+|+.+++++++++++++||||++.+||.+|+++|+++++|.||.+..+++..  ....|+
T Consensus       163 ~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~--~~~~pd  240 (249)
T TIGR01457       163 TVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAG--LPIAPT  240 (249)
T ss_pred             HHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhc--CCCCCC
Confidence            999999898888899999999999999999999999999999779999999999999999999988776643  336899


Q ss_pred             EEECChhhH
Q 025117          241 FYTNKISDF  249 (257)
Q Consensus       241 ~~~~~l~el  249 (257)
                      ++++++.|+
T Consensus       241 ~~v~~l~~~  249 (249)
T TIGR01457       241 HVVSSLAEW  249 (249)
T ss_pred             EEeCChhhC
Confidence            999999874

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=100.00  E-value=2.4e-40  Score=280.97  Aligned_cols=224  Identities=22%  Similarity=0.325  Sum_probs=193.1

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCee
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY   80 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~   80 (257)
                      +||++|++++|+|||++++++++.++|+++||++++++|+||+.++++||++.+    .++|++|++++.+++.  |+. 
T Consensus        32 ~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~~~~~~~l~~~~----~~~~~~g~~~~~~~~~--~~~-  104 (257)
T TIGR01458        32 RLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPAPAARQLLEEKQ----LRPMLLVDDRVLPDFD--GID-  104 (257)
T ss_pred             HHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHHHHHHHHHhcC----CCeEEEECccHHHHhc--cCC-
Confidence            378899999999999999999999999999999999999999999999998753    4589999988888774  321 


Q ss_pred             eCCCCCCCCccccCCCcccCCCCCccEEEEeccC-CCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchH
Q 025117           81 LGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDR-YFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSM  159 (257)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~-~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~  159 (257)
                                           .+++++|++|++. .++|+++..++..|+..+..++|+||++..++.. ....+|.|.+
T Consensus       105 ---------------------~~~~~~Vv~g~~~~~~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~-~~~~~g~g~~  162 (257)
T TIGR01458       105 ---------------------TSDPNCVVMGLAPEHFSYQILNQAFRLLLDGAKPLLIAIGKGRYYKRK-DGLALDVGPF  162 (257)
T ss_pred             ---------------------CCCCCEEEEecccCccCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCC-CCCCCCchHH
Confidence                                 2346799999964 7999999999999986444578999999987643 4467899999


Q ss_pred             HHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCC
Q 025117          160 VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP  239 (257)
Q Consensus       160 ~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~p  239 (257)
                      ++.+..+++.++..+|||+|.+|+.++++++++|++++||||++.+||.+|+++|+++++|.||.+..++.+.  ....|
T Consensus       163 ~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~--~~~~p  240 (257)
T TIGR01458       163 VTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEK--INVPP  240 (257)
T ss_pred             HHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcc--cCCCC
Confidence            9999999888887889999999999999999999999999999779999999999999999999865543321  23689


Q ss_pred             cEEECChhhHHHHHHh
Q 025117          240 DFYTNKISDFLSLKAA  255 (257)
Q Consensus       240 d~~~~~l~el~~~l~~  255 (257)
                      +++++++.||.+++.+
T Consensus       241 d~~~~sl~el~~~l~~  256 (257)
T TIGR01458       241 DLTCDSLPHAVDLILQ  256 (257)
T ss_pred             CEEECCHHHHHHHHhh
Confidence            9999999999988754

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=100.00  E-value=2e-39  Score=255.52  Aligned_cols=224  Identities=29%  Similarity=0.456  Sum_probs=196.3

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCee
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY   80 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~   80 (257)
                      +||..+.+|.|+||.+..|.+.+.++|+++||++++++|+||..++++|++++.+    +.|++-.++.++.|.  |+  
T Consensus        34 rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~~~~l----rP~l~v~d~a~~dF~--gi--  105 (262)
T KOG3040|consen   34 RLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLEENQL----RPYLIVDDDALEDFD--GI--  105 (262)
T ss_pred             HHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHHhcCC----CceEEEcccchhhCC--Cc--
Confidence            3788899999999999999999999999999999999999999999999998654    456666666665543  22  


Q ss_pred             eCCCCCCCCccccCCCcccCCCCCccEEEEecc-CCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchH
Q 025117           81 LGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFD-RYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSM  159 (257)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d-~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~  159 (257)
                                          +..++++||+|.. +.|+|..+..+++.|.+.+..++|+-++.+.+....+ ..+|.|+|
T Consensus       106 --------------------dTs~pn~VViglape~F~y~~ln~AFrvL~e~~k~~LIai~kgryykr~~G-l~lgpG~f  164 (262)
T KOG3040|consen  106 --------------------DTSDPNCVVIGLAPEGFSYQRLNRAFRVLLEMKKPLLIAIGKGRYYKRVDG-LCLGPGPF  164 (262)
T ss_pred             --------------------cCCCCCeEEEecCcccccHHHHHHHHHHHHcCCCCeEEEecCceeeeeccc-cccCchHH
Confidence                                1346889999985 6899999999999999877789999999998765545 56799999


Q ss_pred             HHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCC
Q 025117          160 VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP  239 (257)
Q Consensus       160 ~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~p  239 (257)
                      ..++++++|.+...+|||+|.+|+.+++.+|++|++++||||++..|+.||+++||+.|+|.||.+...+..+  ....|
T Consensus       165 v~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k--~~~~p  242 (262)
T KOG3040|consen  165 VAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEK--PPVPP  242 (262)
T ss_pred             HHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCccccc--CCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999998755443  34789


Q ss_pred             cEEECChhhHHHHHHh
Q 025117          240 DFYTNKISDFLSLKAA  255 (257)
Q Consensus       240 d~~~~~l~el~~~l~~  255 (257)
                      |.++++|.|.++||.+
T Consensus       243 ~~~~d~f~~AVd~I~q  258 (262)
T KOG3040|consen  243 DLTADNFADAVDLIIQ  258 (262)
T ss_pred             chhhhhHHHHHHHHHh
Confidence            9999999999998754

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=100.00  E-value=3.9e-38  Score=275.46  Aligned_cols=245  Identities=20%  Similarity=0.194  Sum_probs=195.3

Q ss_pred             hhcc----CCcEEEEeCCCCcCHHHHHHHH-HhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHc
Q 025117            2 LRSK----GKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELA   76 (257)
Q Consensus         2 L~~~----g~~~~~lTN~s~~~~~~~~~~L-~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~   76 (257)
                      |+++    |++++|+|||+++++++++++| +++|+++++++|+||+.++..|+++.  .  ++++++|+.+++++++..
T Consensus        28 L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~~~~~~ll~~~--~--~~v~viG~~~~~~~l~~~  103 (321)
T TIGR01456        28 LNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSHSPYKSLVNKY--E--KRILAVGTGSVRGVAEGY  103 (321)
T ss_pred             HhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhhHHHHHHHHHc--C--CceEEEeChHHHHHHHHc
Confidence            5666    9999999999999999999999 88999999999999999998888653  2  479999999999999999


Q ss_pred             CCeeeCCCCCCC------CccccCC-------Cccc--CCCCCccEEEEeccCCCCHHHHHHHHHHHHcC---------C
Q 025117           77 GFQYLGGPEDGG------KKIELKP-------GFLM--EHDKDVGAVVVGFDRYFNYYKVQYGTLCIREN---------P  132 (257)
Q Consensus        77 g~~~~~~~~~~~------~~~~~~~-------~~~~--~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~---------~  132 (257)
                      |+..+...++..      ..+.-..       ....  ...++++|||++.|....|.+++.++.+++..         +
T Consensus       104 G~~~vv~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aVvv~~d~~~~~~~l~~~~~~l~~~g~~g~~~~~~  183 (321)
T TIGR01456       104 GFQNVVHQDEIVRYFRDIDPFSGMSDEQVREYSRDIPDLTTKRFDAVLVFNDPVDWAADIQIISDALNSEGLPGEKSGKP  183 (321)
T ss_pred             CCcccccHHHHHhcCCCCCcccccCHHHhhcccccccccCCCceeEEEEecCchHHhhhHHHHHHHHhCCCCcCCCCCCC
Confidence            988643211100      0000000       0000  11257999999999888888899999998752         2


Q ss_pred             CceEEEecCCCccccCCCcccccCchHHHHHHh----ccCCCc--cccCCCcHHHHHHHHHHh--------CC-----CC
Q 025117          133 GCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVG----STQREP--LVVGKPSTFMMDYLANKF--------GI-----QK  193 (257)
Q Consensus       133 ~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~----~~~~~~--~~~gKP~p~~~~~~~~~~--------~~-----~~  193 (257)
                      .+++|+||+|..++...++.++|.|+|..+++.    ++|.++  ..+|||+|.+|+.+++.+        +.     ++
T Consensus       184 ~~~~i~~n~D~~~p~~~g~~~~g~Ga~~~~l~~~~~~~tg~~~~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~  263 (321)
T TIGR01456       184 SIPIYFSNQDLLWANEYKLNRFGQGAFRLLLERIYLELNGKPLQYYTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPF  263 (321)
T ss_pred             CCCEEEeCCCEeeccCCCCceechHHHHHHHHHHHHHhcCCCcceEEcCCCChHHHHHHHHHHHHHHhhhccccccCCCh
Confidence            378999999999986656568999999999987    566643  678999999999999887        43     45


Q ss_pred             CcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          194 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       194 ~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      ++++||||++.+||.+|+++||+|++|.||.++.++..   ....|+++++++.|+.+++
T Consensus       264 ~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~---~~~~p~~vv~~l~e~~~~i  320 (321)
T TIGR01456       264 HALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDL---KECKPTLIVNDVFDAVTKI  320 (321)
T ss_pred             heEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCC---CCCCCCEEECCHHHHHHHh
Confidence            79999999999999999999999999999987765432   2367999999999998875

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=100.00  E-value=4.1e-37  Score=258.22  Aligned_cols=209  Identities=35%  Similarity=0.494  Sum_probs=179.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHh-CCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~-~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~   80 (257)
                      |+++|++++|+|||+++++++++++|.+ +|+++++++|+||+++++.||+++.  +++++|++|+++++++|+..|++.
T Consensus        26 l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~~~~~~l~~~~--~~~~v~v~G~~~~~~~l~~~g~~~  103 (236)
T TIGR01460        26 LRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGSVTKDLLRQRF--EGEKVYVIGVGELRESLEGLGFRN  103 (236)
T ss_pred             HHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHHcCCcC
Confidence            6788999999999999999999999999 8999999999999999999998753  457899999999999999999863


Q ss_pred             eCCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH
Q 025117           81 LGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV  160 (257)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~  160 (257)
                      ...++.          ...+.++.+++|+++.+..++|.++..+..++++ +++++|+||+|..++...+...++.|+++
T Consensus       104 ~~~~~~----------~~~~~~~~~~~vv~~~~~~~~~~~~~~a~~~l~~-~~~~~i~tN~d~~~~~~~g~~~~~~g~~~  172 (236)
T TIGR01460       104 DFFDDI----------DHLAIEKIPAAVIVGEPSDFSYDELAKAAYLLAE-GDVPFIAANRDDLVRLGDGRFRPGAGAIA  172 (236)
T ss_pred             cccCcc----------cccccCCCCeEEEECCCCCcCHHHHHHHHHHHhC-CCCeEEEECCCCCCCCCCCcEeecchHHH
Confidence            000000          0011234568999999999999999999988874 44899999999866655566789999999


Q ss_pred             HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE-EEEcCChhhHHHHHHHcCCeEEEEccC
Q 025117          161 GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI-CMVGDRLDTDILFGQNGGCKTLLVLSG  223 (257)
Q Consensus       161 ~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~-~~IGD~~~~Di~~A~~aG~~ti~V~~G  223 (257)
                      +.+..+.+.+....+||+|.+|+.++++++.+++++ +||||++.+||.+|+++|+++++|.||
T Consensus       173 ~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G  236 (236)
T TIGR01460       173 AGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG  236 (236)
T ss_pred             HHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence            999999988877789999999999999999998887 999999779999999999999999987

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.97  E-value=6.7e-30  Score=215.40  Aligned_cols=199  Identities=21%  Similarity=0.198  Sum_probs=160.2

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCC-CCCceechHHHHHHHHHhc----CCCCCCEEEEEcCHH-HHHHHH
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV-TEEEIFASSFAAAAYLKSI----DFPKDKKVYVVGEDG-ILKELE   74 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~-~~~~i~ts~~~~~~~l~~~----~~~~~~~v~vlg~~~-~~~~l~   74 (257)
                      +|+++|+++.|+|| +++++.++.++|+++|++. ..++|+||+.++..++.+.    +. +.++++++|... ..+++.
T Consensus        35 ~L~~~G~~~~ivTN-~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~~~l~~~~~~~~~-~~~~~~~vGd~~~d~~~~~  112 (242)
T TIGR01459        35 KIIAQGKPVYFVSN-SPRNIFSLHKTLKSLGINADLPEMIISSGEIAVQMILESKKRFDI-RNGIIYLLGHLENDIINLM  112 (242)
T ss_pred             HHHHCCCEEEEEeC-CCCChHHHHHHHHHCCCCccccceEEccHHHHHHHHHhhhhhccC-CCceEEEeCCcccchhhhc
Confidence            37889999999999 5678888889999999998 7899999999888888642    12 246799999865 355665


Q ss_pred             HcCCeeeCCCCCCCCccccCCCcccCCCCCccEEEEecc--CCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcc
Q 025117           75 LAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFD--RYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQE  152 (257)
Q Consensus        75 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d--~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~  152 (257)
                      ..|+...                  ...+++++|+++.+  ..++|+.+..++..+.+ +|+++|+||+|..++. ..+.
T Consensus       113 ~~~~~~~------------------~~~~~~~~vvv~~~~~~~~~~~~~~~~l~~l~~-~g~~~i~tN~d~~~~~-~~~~  172 (242)
T TIGR01459       113 QCYTTDD------------------ENKANASLITIYRSENEKLDLDEFDELFAPIVA-RKIPNICANPDRGINQ-HGIY  172 (242)
T ss_pred             CCCcccc------------------CCcccCcEEEEcCCCcccCCHHHHHHHHHHHHh-CCCcEEEECCCEeccC-CCce
Confidence            5554321                  11245788888865  45889999999988765 6888899999998874 4567


Q ss_pred             cccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC-CCcEEEEcCChhhHHHHHHHcCCeEEEEcc
Q 025117          153 WAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KSQICMVGDRLDTDILFGQNGGCKTLLVLS  222 (257)
Q Consensus       153 ~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~  222 (257)
                      .++.|.++..+..+ +.++...|||+|.+|+.++++++.. +++++||||++.+||.+|+++|+++++|+|
T Consensus       173 ~~~~g~~~~~i~~~-g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t  242 (242)
T TIGR01459       173 RYGAGYYAELIKQL-GGKVIYSGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT  242 (242)
T ss_pred             EecccHHHHHHHHh-CCcEecCCCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence            88999999888663 4566678999999999999999875 679999999988999999999999999985

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=99.86  E-value=1.4e-21  Score=163.63  Aligned_cols=217  Identities=22%  Similarity=0.230  Sum_probs=169.6

Q ss_pred             CCcEEEEeCCCCcCHHHHHHHHHh-CCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCeeeCCC
Q 025117            6 GKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGP   84 (257)
Q Consensus         6 g~~~~~lTN~s~~~~~~~~~~L~~-~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~~~~~   84 (257)
                      .+|++||||++.-+....+++|++ +|++++++||+.|++..+.+..-    +.++|+++|....++..+.+||+.+...
T Consensus        71 kIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviqSHsP~r~l~~~----~~k~vLv~G~~~vr~vAegyGFk~Vvt~  146 (389)
T KOG1618|consen   71 KIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQSHSPFRLLVEY----HYKRVLVVGQGSVREVAEGYGFKNVVTV  146 (389)
T ss_pred             eccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHhhcChHHHHhhh----hhceEEEecCCcHHHHhhccCccceeeH
Confidence            789999999999999999999986 99999999999999999887732    2378999999999999999999988654


Q ss_pred             CCCCCcccc-CC----------Cc-c--cCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCC-------------CceEE
Q 025117           85 EDGGKKIEL-KP----------GF-L--MEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENP-------------GCLFI  137 (257)
Q Consensus        85 ~~~~~~~~~-~~----------~~-~--~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~-------------~~~~i  137 (257)
                      ++.-..++. .+          .+ .  .+....++||++-.|+.-.-.+++..+++++.++             .++++
T Consensus       147 D~l~k~f~~ldP~t~~~~~~k~~~~~R~~~~~r~ieAv~~~~dPv~W~~dlQli~D~l~snG~~gt~~~a~~~~Phipiy  226 (389)
T KOG1618|consen  147 DELAKYFPLLDPFTDLSRELKTTKLARDRELFRRIEAVLLLGDPVRWETDLQLIMDVLLSNGSPGTGRLATGPYPHIPIY  226 (389)
T ss_pred             HHHHHhCCCcccccchhHhhhcccchhccccccceeEEEEecCchhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCceE
Confidence            442111111 10          01 1  1225679999998887544456888888887622             23789


Q ss_pred             EecCCCccccCCCcccccCchHHHHHHhc----cCCC--ccccCCCcHHHHHHHHHHh--------C-CCCCcEEEEcCC
Q 025117          138 ATNRDAVTHLTDAQEWAGGGSMVGAFVGS----TQRE--PLVVGKPSTFMMDYLANKF--------G-IQKSQICMVGDR  202 (257)
Q Consensus       138 ~tn~d~~~~~~~~~~~~~~g~~~~~i~~~----~~~~--~~~~gKP~p~~~~~~~~~~--------~-~~~~~~~~IGD~  202 (257)
                      ++|.|..|+..-.+.++|.|.|.-++++.    +|..  ...+|||++-.|++|...+        + -++....||||+
T Consensus       227 ~sN~DLlW~~e~~lpR~G~GaF~l~lesiy~kltGk~L~~~t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDN  306 (389)
T KOG1618|consen  227 ASNMDLLWMAEYKLPRFGHGAFRLCLESIYQKLTGKPLRYTTLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDN  306 (389)
T ss_pred             EecccccccccCCCccccchHHHHHHHHHHHHhcCCcccccccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCC
Confidence            99999999877778899999997666644    3432  3688999999999885433        2 256789999999


Q ss_pred             hhhHHHHHH---------------HcCCeEEEEccCCCC
Q 025117          203 LDTDILFGQ---------------NGGCKTLLVLSGVTS  226 (257)
Q Consensus       203 ~~~Di~~A~---------------~aG~~ti~V~~G~~~  226 (257)
                      +.+||.+|+               +-||-+|+|.||.+.
T Consensus       307 P~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~~  345 (389)
T KOG1618|consen  307 PMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVYN  345 (389)
T ss_pred             CcccccccccccccccccccccccCCCceEEEEeeeeec
Confidence            999999998               789999999999887

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.82  E-value=4.4e-20  Score=127.45  Aligned_cols=74  Identities=35%  Similarity=0.581  Sum_probs=67.9

Q ss_pred             cCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhH
Q 025117          174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF  249 (257)
Q Consensus       174 ~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el  249 (257)
                      +|||+|.+|+.+++++++++++++||||++.+||++|+++|+++|+|.||.++.+++..  ....|||++++|.|+
T Consensus         2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~--~~~~pd~vv~~l~e~   75 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEK--AEHKPDYVVDDLKEA   75 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHH--SSSTTSEEESSGGGH
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhc--cCCCCCEEECCHHhC
Confidence            69999999999999999999999999999889999999999999999999988877642  236999999999986

...

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=99.79  E-value=4e-19  Score=129.48  Aligned_cols=77  Identities=53%  Similarity=0.861  Sum_probs=67.3

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCe
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQ   79 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~   79 (257)
                      +|+++||+++|+||||++++++++++|+++||++++++|+||+++++.||+++  .++++||++|+++++++|+++|++
T Consensus        25 ~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~~~~~~l~~~--~~~~~v~vlG~~~l~~~l~~~G~e  101 (101)
T PF13344_consen   25 ALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGMAAAEYLKEH--KGGKKVYVLGSDGLREELREAGFE  101 (101)
T ss_dssp             HHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHHHHHHHHHHH--TTSSEEEEES-HHHHHHHHHTTEE
T ss_pred             HHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHHHHHHHHHhc--CCCCEEEEEcCHHHHHHHHHcCCC
Confidence            37899999999999999999999999999999999999999999999999985  346899999999999999999974

...

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.76  E-value=1.6e-18  Score=144.03  Aligned_cols=131  Identities=22%  Similarity=0.195  Sum_probs=108.4

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+++..|+..+..++|+||+..... ...+...|++.+|+.+.+..+.   ...||+|..+..++++++++|++
T Consensus        89 ~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~-~~~l~~~gl~~~F~~i~g~~~~---~~~KP~P~~l~~~~~~~~~~~~~  164 (220)
T COG0546          89 RLFPGVKELLAALKSAGYKLGIVTNKPEREL-DILLKALGLADYFDVIVGGDDV---PPPKPDPEPLLLLLEKLGLDPEE  164 (220)
T ss_pred             ccCCCHHHHHHHHHhCCCeEEEEeCCcHHHH-HHHHHHhCCccccceEEcCCCC---CCCCcCHHHHHHHHHHhCCChhh
Confidence            5678889999999875446889999988653 3355668888888877763333   34899999999999999999889


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      ++||||+ ..||++|++||+.+++|.||+...+.+..    ..||++++++.||..++..
T Consensus       165 ~l~VGDs-~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~----~~~d~vi~~~~el~~~l~~  219 (220)
T COG0546         165 ALMVGDS-LNDILAAKAAGVPAVGVTWGYNSREELAQ----AGADVVIDSLAELLALLAE  219 (220)
T ss_pred             eEEECCC-HHHHHHHHHcCCCEEEEECCCCCCcchhh----cCCCEEECCHHHHHHHHhc
Confidence            9999999 69999999999999999999864444443    6899999999999988764

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.73  E-value=7.8e-18  Score=138.31  Aligned_cols=130  Identities=22%  Similarity=0.193  Sum_probs=103.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|++.+...+|+||+..... ...+...|+..+|+.+.++.   ....+||+|.+|..++++++++|++
T Consensus        75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~-~~~l~~~~l~~~f~~i~~~~---~~~~~KP~~~~~~~~~~~~~~~~~~  150 (205)
T TIGR01454        75 EVFPGVPELLAELRADGVGTAIATGKSGPRA-RSLLEALGLLPLFDHVIGSD---EVPRPKPAPDIVREALRLLDVPPED  150 (205)
T ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCCchHHH-HHHHHHcCChhheeeEEecC---cCCCCCCChHHHHHHHHHcCCChhh
Confidence            4567788889999875446889999876442 22345566666666554433   3345899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      |+||||+ ..|+.+|+++|+++++|.||..+.+++..    ..|+++++++.+|.+++.
T Consensus       151 ~l~igD~-~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~----~~~~~~~~~~~~l~~~~~  204 (205)
T TIGR01454       151 AVMVGDA-VTDLASARAAGTATVAALWGEGDAGELLA----ARPDFLLRKPQSLLALCR  204 (205)
T ss_pred             eEEEcCC-HHHHHHHHHcCCeEEEEEecCCChhhhhh----cCCCeeeCCHHHHHHHhh
Confidence            9999999 59999999999999999999988776653    579999999999988764

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK06769 hypothetical protein; Validated

Probab=99.72  E-value=2.8e-17  Score=131.61  Aligned_cols=135  Identities=20%  Similarity=0.224  Sum_probs=93.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCC-------cccccCchHHHHHHhcc-CCCccccCCCcHHHHHHHHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDA-------QEWAGGGSMVGAFVGST-QREPLVVGKPSTFMMDYLAN  187 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~-------~~~~~~g~~~~~i~~~~-~~~~~~~gKP~p~~~~~~~~  187 (257)
                      ..|+++.+.++.|++.+-.++|+||++........       +...|+..+   +.... ..+....+||+|.+|..+++
T Consensus        28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~~~~~~~KP~p~~~~~~~~  104 (173)
T PRK06769         28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI---YLCPHKHGDGCECRKPSTGMLLQAAE  104 (173)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE---EECcCCCCCCCCCCCCCHHHHHHHHH
Confidence            35788999999998754458899998752210000       111121111   11111 12223458999999999999


Q ss_pred             HhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhh--cCCCCCCCCcEEECChhhHHHHHH
Q 025117          188 KFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML--QSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       188 ~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~--~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      +++++|++|+||||+ .+|+.+|+++|+++|+|.||.......  ........|+++++++.||.+++.
T Consensus       105 ~l~~~p~~~i~IGD~-~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l~  172 (173)
T PRK06769        105 KHGLDLTQCAVIGDR-WTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWIL  172 (173)
T ss_pred             HcCCCHHHeEEEcCC-HHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHHh
Confidence            999999999999999 599999999999999999987543110  000112579999999999998764

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.71  E-value=1.3e-17  Score=137.92  Aligned_cols=130  Identities=24%  Similarity=0.261  Sum_probs=103.0

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .|+.+.+.+..|++.+-.+.|+||+..... ...+...|+..+|+.+....   ....+||+|.+|..++++++++|+++
T Consensus        83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~-~~~l~~~gl~~~f~~i~~~~---~~~~~Kp~p~~~~~~~~~~~~~~~~~  158 (214)
T PRK13288         83 EYETVYETLKTLKKQGYKLGIVTTKMRDTV-EMGLKLTGLDEFFDVVITLD---DVEHAKPDPEPVLKALELLGAKPEEA  158 (214)
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHcCChhceeEEEecC---cCCCCCCCcHHHHHHHHHcCCCHHHE
Confidence            567788899999864334788899876432 22345567666666555433   33458999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +||||+ ..|+++|+++|+++++|.||....+++..    ..|+++++++.++.+++..
T Consensus       159 ~~iGDs-~~Di~aa~~aG~~~i~v~~g~~~~~~l~~----~~~~~~i~~~~~l~~~i~~  212 (214)
T PRK13288        159 LMVGDN-HHDILAGKNAGTKTAGVAWTIKGREYLEQ----YKPDFMLDKMSDLLAIVGD  212 (214)
T ss_pred             EEECCC-HHHHHHHHHCCCeEEEEcCCCCCHHHHhh----cCcCEEECCHHHHHHHHhh
Confidence            999999 59999999999999999999877666543    5799999999999998764

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.70  E-value=6.3e-17  Score=136.08  Aligned_cols=126  Identities=19%  Similarity=0.147  Sum_probs=98.0

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|++ +..++|+||++..      +...|+..+|+.+..+....   ..||+|.+|..++++++++|++
T Consensus       113 ~~~~gv~~~L~~L~~-~~~l~i~Tn~~~~------~~~~gl~~~fd~i~~~~~~~---~~KP~p~~~~~a~~~~~~~~~~  182 (238)
T PRK10748        113 DVPQATHDTLKQLAK-KWPLVAITNGNAQ------PELFGLGDYFEFVLRAGPHG---RSKPFSDMYHLAAEKLNVPIGE  182 (238)
T ss_pred             CCCccHHHHHHHHHc-CCCEEEEECCCch------HHHCCcHHhhceeEecccCC---cCCCcHHHHHHHHHHcCCChhH
Confidence            456788899999986 4568889997653      24567777887776544333   4899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      |+||||++.+||.+|+++||++|||..+........  .....|++.+.+|.||.++|
T Consensus       183 ~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~--~~~~~p~~~i~~l~el~~~~  238 (238)
T PRK10748        183 ILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTW--DSRLLPHIEISRLASLTSLI  238 (238)
T ss_pred             EEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccc--cccCCCCEEECCHHHHHhhC
Confidence            999999976999999999999999987653311100  12257999999999998764

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.70  E-value=2.5e-17  Score=139.29  Aligned_cols=124  Identities=15%  Similarity=0.040  Sum_probs=98.4

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|++.+-.+.|+||+..... ...+...++..+|+.+..+....   .+||+|++|..++++++++|++
T Consensus       108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~-~~~l~~~gl~~~Fd~iv~~~~~~---~~KP~p~~~~~a~~~~~~~~~~  183 (248)
T PLN02770        108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENA-ELMISLLGLSDFFQAVIIGSECE---HAKPHPDPYLKALEVLKVSKDH  183 (248)
T ss_pred             CcCccHHHHHHHHHHcCCeEEEEeCCCHHHH-HHHHHHcCChhhCcEEEecCcCC---CCCCChHHHHHHHHHhCCChhH
Confidence            3567888899999874445789999987543 33445667777777665544433   4899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF  249 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el  249 (257)
                      |+||||+ .+||++|+++|+++|+|.||. ..+.+..    ..|+++++++.|+
T Consensus       184 ~l~vgDs-~~Di~aA~~aGi~~i~v~~g~-~~~~l~~----~~a~~vi~~~~e~  231 (248)
T PLN02770        184 TFVFEDS-VSGIKAGVAAGMPVVGLTTRN-PESLLME----AKPTFLIKDYEDP  231 (248)
T ss_pred             EEEEcCC-HHHHHHHHHCCCEEEEEeCCC-CHHHHhh----cCCCEEeccchhh
Confidence            9999999 599999999999999999985 4444432    5799999999993

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.70  E-value=2.5e-17  Score=137.73  Aligned_cols=128  Identities=17%  Similarity=0.146  Sum_probs=96.7

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .|+.+.+.++.|++.+-.+.|+||+..... ...+...++..+|+.+...   +....+||+|++|..+++++|++|++|
T Consensus        96 ~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~-~~~l~~~~l~~~f~~i~~~---~~~~~~KP~p~~~~~~~~~l~~~p~~~  171 (229)
T PRK13226         96 LFDGVEGMLQRLECAGCVWGIVTNKPEYLA-RLILPQLGWEQRCAVLIGG---DTLAERKPHPLPLLVAAERIGVAPTDC  171 (229)
T ss_pred             eCCCHHHHHHHHHHCCCeEEEECCCCHHHH-HHHHHHcCchhcccEEEec---CcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence            467788888899874445679999876432 2233445555555544332   223358999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChh-hhcCCCCCCCCcEEECChhhHHHHH
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS-MLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~-~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      +||||+ .+||++|+++|+++|+|.||..... ....    ..|+++++++.||.+++
T Consensus       172 l~IGDs-~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~----~~~~~~i~~~~el~~~~  224 (229)
T PRK13226        172 VYVGDD-ERDILAARAAGMPSVAALWGYRLHDDDPLA----WQADVLVEQPQLLWNPA  224 (229)
T ss_pred             EEeCCC-HHHHHHHHHCCCcEEEEeecCCCCCcChhh----cCCCeeeCCHHHHHHHh
Confidence            999999 6999999999999999999986432 2221    57999999999998764

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.70  E-value=1.8e-17  Score=140.54  Aligned_cols=129  Identities=16%  Similarity=0.096  Sum_probs=97.6

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH-HHHHhccCCCccccCCCcHHHHHHHHHHhCCC-C
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV-GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-K  193 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~-~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-~  193 (257)
                      ..|+.+.+.+..|++.+-.+.|+||...... ...+...|+..++ +.+.+.   +....+||+|++|..+++++++. |
T Consensus        99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~-~~~l~~~gl~~~f~d~ii~~---~~~~~~KP~p~~~~~a~~~l~~~~~  174 (253)
T TIGR01422        99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMM-DVVAPEAALQGYRPDYNVTT---DDVPAGRPAPWMALKNAIELGVYDV  174 (253)
T ss_pred             ccCCCHHHHHHHHHHCCCeEEEECCCcHHHH-HHHHHHHHhcCCCCceEEcc---ccCCCCCCCHHHHHHHHHHcCCCCc
Confidence            4567788899999874445788999876432 2223344554443 444333   33345899999999999999995 9


Q ss_pred             CcEEEEcCChhhHHHHHHHcCCeEEEEccCCCC-----------------------hhhhcCCCCCCCCcEEECChhhHH
Q 025117          194 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS-----------------------LSMLQSPNNSIQPDFYTNKISDFL  250 (257)
Q Consensus       194 ~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~-----------------------~~~~~~~~~~~~pd~~~~~l~el~  250 (257)
                      ++|+||||+ .+||++|+++||++|+|.||.+.                       .+.+..    ..||++++++.||.
T Consensus       175 ~~~l~IGDs-~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~v~~~~~el~  249 (253)
T TIGR01422       175 AACVKVGDT-VPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKA----AGAHYVIDTLAELP  249 (253)
T ss_pred             hheEEECCc-HHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHh----cCCCEehhcHHHHH
Confidence            999999999 59999999999999999999862                       234433    68999999999998


Q ss_pred             HHH
Q 025117          251 SLK  253 (257)
Q Consensus       251 ~~l  253 (257)
                      +++
T Consensus       250 ~~~  252 (253)
T TIGR01422       250 AVI  252 (253)
T ss_pred             Hhh
Confidence            765

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.69  E-value=2.7e-17  Score=135.63  Aligned_cols=129  Identities=20%  Similarity=0.280  Sum_probs=99.9

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|++.+..+.|+||...... ...+...++..+|+.+..   .+....+||+|++|..++++++++|++
T Consensus        85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~-~~~l~~~~l~~~f~~~~~---~~~~~~~Kp~p~~~~~~~~~~~~~~~~  160 (213)
T TIGR01449        85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLA-RPLLELLGLAKYFSVLIG---GDSLAQRKPHPDPLLLAAERLGVAPQQ  160 (213)
T ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHcCcHhhCcEEEe---cCCCCCCCCChHHHHHHHHHcCCChhH
Confidence            3467788889888864445888999876442 223455566556654433   333445899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      |+||||+ ..|+.+|+++|+.+|+|.||....+.+..    ..|+++++++.||..++
T Consensus       161 ~~~igDs-~~d~~aa~~aG~~~i~v~~g~~~~~~l~~----~~a~~~i~~~~~l~~~~  213 (213)
T TIGR01449       161 MVYVGDS-RVDIQAARAAGCPSVLLTYGYRYGEAIDL----LPPDVLYDSLNELPPLL  213 (213)
T ss_pred             eEEeCCC-HHHHHHHHHCCCeEEEEccCCCCCcchhh----cCCCeEeCCHHHHHhhC
Confidence            9999999 69999999999999999999876554432    47999999999998753

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.69  E-value=9.7e-17  Score=133.60  Aligned_cols=131  Identities=23%  Similarity=0.247  Sum_probs=102.6

Q ss_pred             CCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCC
Q 025117          115 YFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS  194 (257)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~  194 (257)
                      ...|+.+...++.++.. -.++|+||...... ...+...|+..+|+.+..+....   ..||+|.+|+++++++|++|+
T Consensus        98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~-~~~l~~~gl~~~Fd~v~~s~~~g---~~KP~~~~f~~~~~~~g~~p~  172 (229)
T COG1011          98 LPDYPEALEALKELGKK-YKLGILTNGARPHQ-ERKLRQLGLLDYFDAVFISEDVG---VAKPDPEIFEYALEKLGVPPE  172 (229)
T ss_pred             CccChhHHHHHHHHHhh-ccEEEEeCCChHHH-HHHHHHcCChhhhheEEEecccc---cCCCCcHHHHHHHHHcCCCcc
Confidence            35667777777777653 34788999755432 23445667778888887665444   589999999999999999999


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +++||||++.+||.+|+++||++||+..+....  ..   ....|++.+.++.++.+++..
T Consensus       173 ~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~--~~---~~~~~~~~i~~l~~l~~~~~~  228 (229)
T COG1011         173 EALFVGDSLENDILGARALGMKTVWINRGGKPL--PD---ALEAPDYEISSLAELLDLLER  228 (229)
T ss_pred             eEEEECCChhhhhHHHHhcCcEEEEECCCCCCC--CC---CccCCceEEcCHHHHHHHHhh
Confidence            999999999999999999999999998876543  11   115799999999999998764

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.69  E-value=3e-16  Score=125.99  Aligned_cols=129  Identities=18%  Similarity=0.102  Sum_probs=88.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCC-cccccCchHHHHH-----------Hhcc-CC-------CccccC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDA-QEWAGGGSMVGAF-----------VGST-QR-------EPLVVG  175 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~-~~~~~~g~~~~~i-----------~~~~-~~-------~~~~~g  175 (257)
                      ..|+.+.+++..|++.+-.++|+||+......... ....+...++..+           ..+. ..       +....+
T Consensus        26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  105 (176)
T TIGR00213        26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVEEFRQVCDCR  105 (176)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccccccCCCCCC
Confidence            34678889999998744457889999852110000 0001111122211           1110 00       123358


Q ss_pred             CCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeE-EEEccCCCChhhhcCCCCCCCCcEEECChhhHH
Q 025117          176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT-LLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL  250 (257)
Q Consensus       176 KP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~t-i~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~  250 (257)
                      ||+|.+|..++++++++|++|+||||+ .+||++|+++|+++ ++|.||.......     ...|+++++++.||.
T Consensus       106 KP~p~~~~~a~~~~~~~~~~~v~VGDs-~~Di~aA~~aG~~~~i~v~~g~~~~~~~-----~~~ad~~i~~~~el~  175 (176)
T TIGR00213       106 KPKPGMLLQARKELHIDMAQSYMVGDK-LEDMQAGVAAKVKTNVLVRTGKPITPEA-----ENIADWVLNSLADLP  175 (176)
T ss_pred             CCCHHHHHHHHHHcCcChhhEEEEcCC-HHHHHHHHHCCCcEEEEEecCCcccccc-----cccCCEEeccHHHhh
Confidence            999999999999999999999999999 69999999999998 8999986532222     146999999999985

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.68  E-value=5.7e-17  Score=134.50  Aligned_cols=127  Identities=26%  Similarity=0.257  Sum_probs=97.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+++.+.+..|++.+..++|+||.+.... ...+...|+..+|+.+....   ....+||+|++|..+++++|++|++
T Consensus        94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~-~~~l~~~~l~~~f~~i~~~~---~~~~~KP~~~~~~~~~~~~~~~~~~  169 (221)
T TIGR02253        94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQ-WEKLERLGVRDFFDAVITSE---EEGVEKPHPKIFYAALKRLGVKPEE  169 (221)
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEeCCchHHH-HHHHHhCChHHhccEEEEec---cCCCCCCCHHHHHHHHHHcCCChhh
Confidence            3567788899999874445788999976432 22345566666666554433   3335899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF  249 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el  249 (257)
                      ++||||++.+||.+|+++|+++|+|.+|........   ....|+++++++.||
T Consensus       170 ~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~---~~~~~~~~i~~~~el  220 (221)
T TIGR02253       170 AVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDD---VYPYPDYEISSLREL  220 (221)
T ss_pred             EEEECCChHHHHHHHHHCCCEEEEECCCCCcccccc---cccCCCeeeCcHHhh
Confidence            999999966899999999999999999876443221   124689999999887

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.67  E-value=6.6e-17  Score=134.11  Aligned_cols=129  Identities=19%  Similarity=0.204  Sum_probs=100.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCc--hHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC-
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGG--SMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-  192 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g--~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-  192 (257)
                      ..|+.+.+.+..|++.+-.+.|+||...... ...+...++.  .+|+.+.+...   ...+||+|++|..+++++++. 
T Consensus        87 ~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~-~~~l~~~~l~~~~~f~~i~~~~~---~~~~KP~p~~~~~a~~~~~~~~  162 (220)
T TIGR03351        87 VALPGAEEAFRSLRSSGIKVALTTGFDRDTA-ERLLEKLGWTVGDDVDAVVCPSD---VAAGRPAPDLILRAMELTGVQD  162 (220)
T ss_pred             ccCCCHHHHHHHHHHCCCEEEEEeCCchHHH-HHHHHHhhhhhhccCCEEEcCCc---CCCCCCCHHHHHHHHHHcCCCC
Confidence            4566788899999874445789999887542 2233445554  55555544433   334899999999999999997 


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeE-EEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKT-LLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~t-i~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      |++|+||||+ .+||++|+++||.+ +++.+|....+.+..    ..|+++++++.+|.+++
T Consensus       163 ~~~~~~igD~-~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~----~~~~~~i~~~~~l~~~~  219 (220)
T TIGR03351       163 VQSVAVAGDT-PNDLEAGINAGAGAVVGVLTGAHDAEELSR----HPHTHVLDSVADLPALL  219 (220)
T ss_pred             hhHeEEeCCC-HHHHHHHHHCCCCeEEEEecCCCcHHHHhh----cCCceeecCHHHHHHhh
Confidence            7999999999 59999999999999 999999877766643    57999999999998765

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK09449 dUMP phosphatase; Provisional

Probab=99.67  E-value=1.4e-16  Score=132.59  Aligned_cols=128  Identities=25%  Similarity=0.243  Sum_probs=96.8

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC-CC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KS  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-~~  194 (257)
                      ..|+.+.+.+..|++ +..+.|+||...... ...+...|+..+|+.+..+..   ....||+|++|..+++++|+. ++
T Consensus        95 ~~~~g~~~~L~~L~~-~~~~~i~Tn~~~~~~-~~~l~~~~l~~~fd~v~~~~~---~~~~KP~p~~~~~~~~~~~~~~~~  169 (224)
T PRK09449         95 TPLPGAVELLNALRG-KVKMGIITNGFTELQ-QVRLERTGLRDYFDLLVISEQ---VGVAKPDVAIFDYALEQMGNPDRS  169 (224)
T ss_pred             ccCccHHHHHHHHHh-CCeEEEEeCCcHHHH-HHHHHhCChHHHcCEEEEECc---cCCCCCCHHHHHHHHHHcCCCCcc
Confidence            356788889999984 456789999876432 223455666667766654433   334899999999999999985 58


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      +|+||||++.+||++|+++||+++++.++...  ...    ...|+++++++.||.+++.
T Consensus       170 ~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~--~~~----~~~~~~~i~~~~el~~~l~  223 (224)
T PRK09449        170 RVLMVGDNLHSDILGGINAGIDTCWLNAHGRE--QPE----GIAPTYQVSSLSELEQLLC  223 (224)
T ss_pred             cEEEEcCCcHHHHHHHHHCCCcEEEECCCCCC--CCC----CCCCeEEECCHHHHHHHHh
Confidence            99999999657999999999999999864321  111    2469999999999998875

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.66  E-value=1.3e-16  Score=132.38  Aligned_cols=126  Identities=19%  Similarity=0.217  Sum_probs=98.8

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHh-CCCCCc
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKF-GIQKSQ  195 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~-~~~~~~  195 (257)
                      .++.+.+.+..+++. ....|+||...... ...+...++..+|+.+..+..   ....||+|.+|..+++++ +++|++
T Consensus        98 ~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~-~~~l~~~~l~~~fd~i~~~~~---~~~~KP~~~~~~~~~~~~~~~~~~~  172 (224)
T TIGR02254        98 LLPGAFELMENLQQK-FRLYIVTNGVRETQ-YKRLRKSGLFPFFDDIFVSED---AGIQKPDKEIFNYALERMPKFSKEE  172 (224)
T ss_pred             eCccHHHHHHHHHhc-CcEEEEeCCchHHH-HHHHHHCCcHhhcCEEEEcCc---cCCCCCCHHHHHHHHHHhcCCCchh
Confidence            456778888888875 67889999876442 223455677777776655433   335899999999999999 999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      |+||||++.+|+++|+++||.+|++.+|.....  .    ...|+++++++.||.+++
T Consensus       173 ~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~--~----~~~~~~~~~~~~el~~~~  224 (224)
T TIGR02254       173 VLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNP--D----DIIPTYEIRSLEELYEIL  224 (224)
T ss_pred             eEEECCCcHHHHHHHHHCCCcEEEECCCCCCCC--C----CCCCceEECCHHHHHhhC
Confidence            999999954799999999999999998765421  1    257899999999998764

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.66  E-value=2e-16  Score=134.48  Aligned_cols=125  Identities=16%  Similarity=0.212  Sum_probs=97.9

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .|+.+.+.+..|++.+-..+|+||+..... ...+...|+..+|+.+.++..   ...+||+|++|..++++++++|++|
T Consensus       110 l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~-~~~l~~~gl~~~Fd~ii~~~d---~~~~KP~Pe~~~~a~~~l~~~p~~~  185 (260)
T PLN03243        110 LRPGSREFVQALKKHEIPIAVASTRPRRYL-ERAIEAVGMEGFFSVVLAAED---VYRGKPDPEMFMYAAERLGFIPERC  185 (260)
T ss_pred             cCCCHHHHHHHHHHCCCEEEEEeCcCHHHH-HHHHHHcCCHhhCcEEEeccc---CCCCCCCHHHHHHHHHHhCCChHHe
Confidence            467888999999874445889999876442 234455677667666655433   3458999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      +||||+ .+||++|+++||++|+|. |......+      ..|+++++++.||..+.
T Consensus       186 l~IgDs-~~Di~aA~~aG~~~i~v~-g~~~~~~l------~~ad~vi~~~~el~~~~  234 (260)
T PLN03243        186 IVFGNS-NSSVEAAHDGCMKCVAVA-GKHPVYEL------SAGDLVVRRLDDLSVVD  234 (260)
T ss_pred             EEEcCC-HHHHHHHHHcCCEEEEEe-cCCchhhh------ccCCEEeCCHHHHHHHH
Confidence            999999 699999999999999996 65554433      25899999999997653

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.65  E-value=1.9e-16  Score=135.42  Aligned_cols=131  Identities=17%  Similarity=0.095  Sum_probs=96.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchH-HHHHHhccCCCccccCCCcHHHHHHHHHHhCCC-C
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSM-VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-K  193 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~-~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-~  193 (257)
                      ..|+.+.+.+..|++.+-.+.|+||...... ...+...++..+ ++.+.++   +....+||+|++|..+++++++. |
T Consensus       101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~-~~~l~~~~l~~~~~d~i~~~---~~~~~~KP~p~~~~~a~~~l~~~~~  176 (267)
T PRK13478        101 TPIPGVLEVIAALRARGIKIGSTTGYTREMM-DVVVPLAAAQGYRPDHVVTT---DDVPAGRPYPWMALKNAIELGVYDV  176 (267)
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHH-HHHHHHHhhcCCCceEEEcC---CcCCCCCCChHHHHHHHHHcCCCCC
Confidence            3567788899999875445788999877432 112222333333 2433333   33345899999999999999996 6


Q ss_pred             CcEEEEcCChhhHHHHHHHcCCeEEEEccCCCC-----------------------hhhhcCCCCCCCCcEEECChhhHH
Q 025117          194 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS-----------------------LSMLQSPNNSIQPDFYTNKISDFL  250 (257)
Q Consensus       194 ~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~-----------------------~~~~~~~~~~~~pd~~~~~l~el~  250 (257)
                      ++|+||||+ .+||++|+++|+++|+|.||.+.                       .+.+..    ..|+++++++.+|.
T Consensus       177 ~e~l~IGDs-~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~a~~vi~~~~~l~  251 (267)
T PRK13478        177 AACVKVDDT-VPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRA----AGAHYVIDTIADLP  251 (267)
T ss_pred             cceEEEcCc-HHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHH----cCCCeehhhHHHHH
Confidence            999999999 59999999999999999999863                       133433    57999999999999


Q ss_pred             HHHHh
Q 025117          251 SLKAA  255 (257)
Q Consensus       251 ~~l~~  255 (257)
                      +++..
T Consensus       252 ~~l~~  256 (267)
T PRK13478        252 AVIAD  256 (267)
T ss_pred             HHHHH
Confidence            87753

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.63  E-value=4.9e-16  Score=133.13  Aligned_cols=130  Identities=17%  Similarity=0.201  Sum_probs=100.8

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|+..+-.++|+||...... ...+...+++.+|+.+.+.   +....+||+|.+|+.+++++|++|++
T Consensus       101 ~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~-~~~l~~~~i~~~f~~i~~~---d~~~~~Kp~p~~~~~~~~~~g~~~~~  176 (272)
T PRK13223        101 VVYPGVRDTLKWLKKQGVEMALITNKPERFV-APLLDQMKIGRYFRWIIGG---DTLPQKKPDPAALLFVMKMAGVPPSQ  176 (272)
T ss_pred             ccCCCHHHHHHHHHHCCCeEEEEECCcHHHH-HHHHHHcCcHhhCeEEEec---CCCCCCCCCcHHHHHHHHHhCCChhH
Confidence            3567788899999864445788899866432 2233345666666554333   22334899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      |+||||+ ..||++|+++|+++++|.+|......+..    ..|+++++++.+|.+++.
T Consensus       177 ~l~IGD~-~~Di~aA~~aGi~~i~v~~G~~~~~~l~~----~~~~~vi~~l~el~~~~~  230 (272)
T PRK13223        177 SLFVGDS-RSDVLAAKAAGVQCVALSYGYNHGRPIAE----ESPALVIDDLRALLPGCA  230 (272)
T ss_pred             EEEECCC-HHHHHHHHHCCCeEEEEecCCCCchhhhh----cCCCEEECCHHHHHHHHh
Confidence            9999999 69999999999999999999876665543    479999999999987755

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.62  E-value=1e-15  Score=127.32  Aligned_cols=133  Identities=20%  Similarity=0.239  Sum_probs=101.4

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+.+..+++.+..+.|+||...... ...+...++..+|+.+.   +.+....+||+|.+|+.++++++++|++
T Consensus        93 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~-~~~l~~~~l~~~f~~~~---~~~~~~~~kp~~~~~~~~~~~~~~~~~~  168 (226)
T PRK13222         93 RLYPGVKETLAALKAAGYPLAVVTNKPTPFV-APLLEALGIADYFSVVI---GGDSLPNKKPDPAPLLLACEKLGLDPEE  168 (226)
T ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHcCCccCccEEE---cCCCCCCCCcChHHHHHHHHHcCCChhh
Confidence            3566788888888864445778899876432 22333445544555433   3333445899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhhC
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAAV  257 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~~  257 (257)
                      |+||||+ ..|+.+|+++|+.+|+|.+|.....+...    ..|+++++++.+|..++..++
T Consensus       169 ~i~igD~-~~Di~~a~~~g~~~i~v~~g~~~~~~~~~----~~~~~~i~~~~~l~~~l~~~~  225 (226)
T PRK13222        169 MLFVGDS-RNDIQAARAAGCPSVGVTYGYNYGEPIAL----SEPDVVIDHFAELLPLLGLAL  225 (226)
T ss_pred             eEEECCC-HHHHHHHHHCCCcEEEECcCCCCccchhh----cCCCEEECCHHHHHHHHHHhc
Confidence            9999999 69999999999999999999765444432    579999999999999887653

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.62  E-value=1.1e-15  Score=135.20  Aligned_cols=123  Identities=15%  Similarity=0.106  Sum_probs=97.9

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|++.+-.+.|+||+..... ...+...|+..+|+.+......   ..+||+|++|..+++++|++|++
T Consensus       216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~-~~~L~~lgL~~yFd~Iv~sddv---~~~KP~Peifl~A~~~lgl~Pee  291 (381)
T PLN02575        216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTL-ENAIGSIGIRGFFSVIVAAEDV---YRGKPDPEMFIYAAQLLNFIPER  291 (381)
T ss_pred             CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHcCCHHHceEEEecCcC---CCCCCCHHHHHHHHHHcCCCccc
Confidence            3577889999999875445889999987543 3344567777787776654443   34899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL  250 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~  250 (257)
                      |+||||+ ..||++|+++||++|+|.++. ....+      ..++++++++.||.
T Consensus       292 cl~IGDS-~~DIeAAk~AGm~~IgV~~~~-~~~~l------~~Ad~iI~s~~EL~  338 (381)
T PLN02575        292 CIVFGNS-NQTVEAAHDARMKCVAVASKH-PIYEL------GAADLVVRRLDELS  338 (381)
T ss_pred             EEEEcCC-HHHHHHHHHcCCEEEEECCCC-ChhHh------cCCCEEECCHHHHH
Confidence            9999999 599999999999999998764 33322      25899999999983

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.62  E-value=1.2e-15  Score=122.97  Aligned_cols=132  Identities=15%  Similarity=0.141  Sum_probs=92.4

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCC--------------CcccccCchHHHHHHhcc--CCCccccCCCcH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTD--------------AQEWAGGGSMVGAFVGST--QREPLVVGKPST  179 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~--------------~~~~~~~g~~~~~i~~~~--~~~~~~~gKP~p  179 (257)
                      ..|+.+.+.+..|++.+-.++|+||+........              .+...|+  .++.+..+.  ..+....+||+|
T Consensus        29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~p  106 (181)
T PRK08942         29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPKP  106 (181)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCCH
Confidence            4567788899999875445788999874210000              0001111  122222111  112234589999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCC--cEEECChhhHHHHHHh
Q 025117          180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP--DFYTNKISDFLSLKAA  255 (257)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~p--d~~~~~l~el~~~l~~  255 (257)
                      .+|..++++++++|++++||||+ .+|+.+|+++|+.++++.+|........     ..|  +++++++.++.+++.+
T Consensus       107 ~~~~~~~~~l~~~~~~~~~VgDs-~~Di~~A~~aG~~~i~v~~g~~~~~~~~-----~~~~~~~ii~~l~el~~~l~~  178 (181)
T PRK08942        107 GMLLSIAERLNIDLAGSPMVGDS-LRDLQAAAAAGVTPVLVRTGKGVTTLAE-----GAAPGTWVLDSLADLPQALKK  178 (181)
T ss_pred             HHHHHHHHHcCCChhhEEEEeCC-HHHHHHHHHCCCeEEEEcCCCCchhhhc-----ccCCCceeecCHHHHHHHHHh
Confidence            99999999999999999999999 5999999999999999999876433222     345  9999999999988764

>PLN02811 hydrolase

Probab=99.60  E-value=7.4e-16  Score=128.04  Aligned_cols=127  Identities=15%  Similarity=0.080  Sum_probs=91.3

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhC---CC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFG---IQ  192 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~---~~  192 (257)
                      ..|+.+.+.++.|++.+..+.|+||..............++..+|+.+.+.... ....+||+|++|..++++++   ++
T Consensus        78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~-~~~~~KP~p~~~~~a~~~~~~~~~~  156 (220)
T PLN02811         78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDP-EVKQGKPAPDIFLAAARRFEDGPVD  156 (220)
T ss_pred             CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChh-hccCCCCCcHHHHHHHHHhCCCCCC
Confidence            347788899999987544578889986532111111222333344433332200 33458999999999999996   99


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHH
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL  250 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~  250 (257)
                      |++|+||||+ .+|+++|+++|+++|+|.+|.......      ..|+++++++.|+.
T Consensus       157 ~~~~v~IgDs-~~di~aA~~aG~~~i~v~~~~~~~~~~------~~~d~vi~~~~e~~  207 (220)
T PLN02811        157 PGKVLVFEDA-PSGVEAAKNAGMSVVMVPDPRLDKSYC------KGADQVLSSLLDFK  207 (220)
T ss_pred             ccceEEEecc-HhhHHHHHHCCCeEEEEeCCCCcHhhh------hchhhHhcCHhhCC
Confidence            9999999999 599999999999999999987655432      36899999998863

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.59  E-value=1.1e-15  Score=126.98  Aligned_cols=127  Identities=10%  Similarity=0.031  Sum_probs=97.8

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+++.+.+..+++.+...+|+||...... ...+...++..+|+.+...   +....+||+|++|..+++++|++|++
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~-~~~l~~~~l~~~f~~~~~~---~~~~~~Kp~~~~~~~~~~~~~~~~~~  167 (222)
T PRK10826         92 PLLPGVREALALCKAQGLKIGLASASPLHML-EAVLTMFDLRDYFDALASA---EKLPYSKPHPEVYLNCAAKLGVDPLT  167 (222)
T ss_pred             CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHH-HHHHHhCcchhcccEEEEc---ccCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            4678889999999874445788899776432 2233456666666655443   33445999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSL  252 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~  252 (257)
                      |+||||++ .|+++|+++|+++|+|.++....+...     ..+++++.++.||..+
T Consensus       168 ~~~igDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~-----~~~~~~~~~~~dl~~~  218 (222)
T PRK10826        168 CVALEDSF-NGMIAAKAARMRSIVVPAPEQQNDPRW-----ALADVKLESLTELTAA  218 (222)
T ss_pred             eEEEcCCh-hhHHHHHHcCCEEEEecCCccCchhhh-----hhhheeccCHHHHhhh
Confidence            99999995 999999999999999998865543222     3589999999998653

>PRK11587 putative phosphatase; Provisional

Probab=99.58  E-value=1.8e-15  Score=125.48  Aligned_cols=122  Identities=17%  Similarity=0.134  Sum_probs=89.6

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|++.+-..+|+||+..... ...+...++. +++.+.+.   +.....||+|++|..+++++|++|++
T Consensus        83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~-~~~l~~~~l~-~~~~i~~~---~~~~~~KP~p~~~~~~~~~~g~~p~~  157 (218)
T PRK11587         83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVA-SARHKAAGLP-APEVFVTA---ERVKRGKPEPDAYLLGAQLLGLAPQE  157 (218)
T ss_pred             eeCcCHHHHHHHHHHcCCcEEEEcCCCchHH-HHHHHhcCCC-CccEEEEH---HHhcCCCCCcHHHHHHHHHcCCCccc
Confidence            3577888999999875445888899876432 1122334443 22333222   22334899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL  250 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~  250 (257)
                      |+||||+ ..|+++|+++|+.+|+|.+|... ...      ..|+++++++.||.
T Consensus       158 ~l~igDs-~~di~aA~~aG~~~i~v~~~~~~-~~~------~~~~~~~~~~~el~  204 (218)
T PRK11587        158 CVVVEDA-PAGVLSGLAAGCHVIAVNAPADT-PRL------DEVDLVLHSLEQLT  204 (218)
T ss_pred             EEEEecc-hhhhHHHHHCCCEEEEECCCCch-hhh------ccCCEEecchhhee
Confidence            9999999 69999999999999999887532 211      36899999999874

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.57  E-value=4.3e-15  Score=122.68  Aligned_cols=106  Identities=23%  Similarity=0.213  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHcCCC-ceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEE
Q 025117          119 YKVQYGTLCIRENPG-CLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC  197 (257)
Q Consensus       119 ~~~~~~~~~l~~~~~-~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  197 (257)
                      +.+++++..+|+ +| ++++.||-|....  ..+..+++..+|+.+..++...   ..||+|.+|+.+++++++.|++|+
T Consensus       116 ~~~~~~lq~lR~-~g~~l~iisN~d~r~~--~~l~~~~l~~~fD~vv~S~e~g---~~KPDp~If~~al~~l~v~Pee~v  189 (237)
T KOG3085|consen  116 DGMQELLQKLRK-KGTILGIISNFDDRLR--LLLLPLGLSAYFDFVVESCEVG---LEKPDPRIFQLALERLGVKPEECV  189 (237)
T ss_pred             cHHHHHHHHHHh-CCeEEEEecCCcHHHH--HHhhccCHHHhhhhhhhhhhhc---cCCCChHHHHHHHHHhCCChHHeE
Confidence            346678888887 55 5778899998664  3556678878898888766544   489999999999999999999999


Q ss_pred             EEcCChhhHHHHHHHcCCeEEEEccCCCChhhh
Q 025117          198 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML  230 (257)
Q Consensus       198 ~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~  230 (257)
                      ||||++.+|+++|+++||++++|-.........
T Consensus       190 hIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~  222 (237)
T KOG3085|consen  190 HIGDLLENDYEGARNLGWHAILVDNSITALKEL  222 (237)
T ss_pred             EecCccccccHhHHHcCCEEEEEccccchhhhh
Confidence            999999999999999999999999776554443

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.57  E-value=2.9e-14  Score=113.77  Aligned_cols=102  Identities=22%  Similarity=0.198  Sum_probs=75.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCc-cccCCCcHHHHHHHHHHhCCCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP-LVVGKPSTFMMDYLANKFGIQKS  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~-~~~gKP~p~~~~~~~~~~~~~~~  194 (257)
                      ..|+.+.+++..|++.+..++|+||.+.....             ..+....+... ....||+|.+|..++++++++++
T Consensus        43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~-------------~~~~~~~gl~~~~~~~KP~p~~~~~~l~~~~~~~~  109 (170)
T TIGR01668        43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRA-------------KAVEKALGIPVLPHAVKPPGCAFRRAHPEMGLTSE  109 (170)
T ss_pred             CcChhHHHHHHHHHHcCCEEEEEeCCchHHHH-------------HHHHHHcCCEEEcCCCCCChHHHHHHHHHcCCCHH
Confidence            46788889999998744457889998631111             11111111111 12379999999999999999999


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhh
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML  230 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~  230 (257)
                      +++||||++.+|+.+|+++|+.+|+|.+|.++.+.+
T Consensus       110 ~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~~  145 (170)
T TIGR01668       110 QVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQWF  145 (170)
T ss_pred             HEEEECCcchHHHHHHHHcCCeEEEEccCcCCcccc
Confidence            999999996689999999999999999998766543

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.56  E-value=2.4e-15  Score=125.33  Aligned_cols=107  Identities=10%  Similarity=0.039  Sum_probs=81.0

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|++.+..++|+||+..... ...+...|+..+|+.+..+.   ....+||+|++|..+++++|++|++
T Consensus        93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~-~~~l~~~~l~~~fd~iv~s~---~~~~~KP~p~~~~~~~~~~~~~p~~  168 (224)
T PRK14988         93 VLREDTVPFLEALKASGKRRILLTNAHPHNL-AVKLEHTGLDAHLDLLLSTH---TFGYPKEDQRLWQAVAEHTGLKAER  168 (224)
T ss_pred             CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHH-HHHHHHCCcHHHCCEEEEee---eCCCCCCCHHHHHHHHHHcCCChHH
Confidence            4567788899999874445789999766442 22334566666665554333   3334899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeE-EEEccCCCCh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKT-LLVLSGVTSL  227 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~t-i~V~~G~~~~  227 (257)
                      |+||||+ ..|+++|+++||++ +.|.++.+..
T Consensus       169 ~l~igDs-~~di~aA~~aG~~~~~~v~~~~~~~  200 (224)
T PRK14988        169 TLFIDDS-EPILDAAAQFGIRYCLGVTNPDSGI  200 (224)
T ss_pred             EEEEcCC-HHHHHHHHHcCCeEEEEEeCCCCCc
Confidence            9999999 59999999999985 6788876543

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.55  E-value=1e-14  Score=124.83  Aligned_cols=129  Identities=19%  Similarity=0.162  Sum_probs=100.5

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|+..+-.+.|+||...... ...+...|+..+|+.+..   .+.   .+|+|+.|..++++++++|++
T Consensus       142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~-~~~L~~~gl~~~F~~vi~---~~~---~~~k~~~~~~~l~~~~~~p~~  214 (273)
T PRK13225        142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNI-EAFLQRQGLRSLFSVVQA---GTP---ILSKRRALSQLVAREGWQPAA  214 (273)
T ss_pred             CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHcCChhheEEEEe---cCC---CCCCHHHHHHHHHHhCcChhH
Confidence            3567888999999864335778999887543 234455676666664422   222   245578999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      |+||||+ ..||++|+++|+++|+|.+|....+++..    ..|+++++++.||++++.+.
T Consensus       215 ~l~IGDs-~~Di~aA~~AG~~~I~v~~g~~~~~~l~~----~~ad~~i~~~~eL~~~~~~~  270 (273)
T PRK13225        215 VMYVGDE-TRDVEAARQVGLIAVAVTWGFNDRQSLVA----ACPDWLLETPSDLLQAVTQL  270 (273)
T ss_pred             EEEECCC-HHHHHHHHHCCCeEEEEecCCCCHHHHHH----CCCCEEECCHHHHHHHHHHH
Confidence            9999999 69999999999999999999887766653    57999999999999987654

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.54  E-value=7.7e-15  Score=126.59  Aligned_cols=126  Identities=11%  Similarity=-0.008  Sum_probs=91.4

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|++.+-.++|+||....... ..+...+...++..+... +.+....+||+|++|..++++++++|++
T Consensus       144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~-~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~  221 (286)
T PLN02779        144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVS-KIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR  221 (286)
T ss_pred             CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence            35778888998888744458889998664321 111111111122222222 2233345899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL  250 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~  250 (257)
                      |+||||+ ..||++|+++||.+|+|.+|.+..+++      ..|+++++++.++.
T Consensus       222 ~l~IGDs-~~Di~aA~~aG~~~i~v~~g~~~~~~l------~~ad~vi~~~~~l~  269 (286)
T PLN02779        222 CVVVEDS-VIGLQAAKAAGMRCIVTKSSYTADEDF------SGADAVFDCLGDVP  269 (286)
T ss_pred             EEEEeCC-HHhHHHHHHcCCEEEEEccCCcccccc------CCCcEEECChhhcc
Confidence            9999999 599999999999999999997765443      26899999999985

>PLN02940 riboflavin kinase

Probab=99.54  E-value=6.9e-15  Score=131.65  Aligned_cols=124  Identities=15%  Similarity=0.140  Sum_probs=95.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcc-cccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQE-WAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~-~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~  194 (257)
                      ..|+.+.+.++.|++.+-.+.|+||...... ...+. ..++..+|+.+.+..   ....+||+|++|..++++++++|+
T Consensus        93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~-~~~l~~~~gl~~~Fd~ii~~d---~v~~~KP~p~~~~~a~~~lgv~p~  168 (382)
T PLN02940         93 KALPGANRLIKHLKSHGVPMALASNSPRANI-EAKISCHQGWKESFSVIVGGD---EVEKGKPSPDIFLEAAKRLNVEPS  168 (382)
T ss_pred             CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHH-HHHHHhccChHhhCCEEEehh---hcCCCCCCHHHHHHHHHHcCCChh
Confidence            3467788899999875445889999876442 22222 456655666554433   334589999999999999999999


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHH
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL  250 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~  250 (257)
                      +|+||||+ .+||++|+++||++|+|.+|.......      ..|+++++++.|+.
T Consensus       169 ~~l~VGDs-~~Di~aA~~aGi~~I~v~~g~~~~~~~------~~ad~~i~sl~el~  217 (382)
T PLN02940        169 NCLVIEDS-LPGVMAGKAAGMEVIAVPSIPKQTHLY------SSADEVINSLLDLQ  217 (382)
T ss_pred             HEEEEeCC-HHHHHHHHHcCCEEEEECCCCcchhhc------cCccEEeCCHhHcC
Confidence            99999999 599999999999999999986543221      46899999999875

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.53  E-value=1.2e-14  Score=118.96  Aligned_cols=110  Identities=15%  Similarity=0.090  Sum_probs=82.4

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .|+.+.+.++.+++.+..++|+||.+............++..+|+.+..+.   ....+||+|++|+.+++++|++|++|
T Consensus        85 ~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~---~~~~~KP~p~~~~~~~~~~~~~p~~~  161 (199)
T PRK09456         85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQ---DLGMRKPEARIYQHVLQAEGFSAADA  161 (199)
T ss_pred             cCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEec---ccCCCCCCHHHHHHHHHHcCCChhHe
Confidence            478889999999874445788999876431100011234555565555443   33458999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML  230 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~  230 (257)
                      +||||+ .+||.+|+++||+++++.++..-.+.+
T Consensus       162 l~vgD~-~~di~aA~~aG~~~i~~~~~~~~~~~l  194 (199)
T PRK09456        162 VFFDDN-ADNIEAANALGITSILVTDKQTIPDYF  194 (199)
T ss_pred             EEeCCC-HHHHHHHHHcCCEEEEecCCccHHHHH
Confidence            999999 599999999999999999876555444

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.53  E-value=1.2e-14  Score=118.65  Aligned_cols=104  Identities=17%  Similarity=0.093  Sum_probs=82.3

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+++..|++.+-.++|+||.+.... ...+...|+..+|+.+..+...   ..+||+|++|..++++++++|++
T Consensus        92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~-~~~l~~~gl~~~fd~i~~s~~~---~~~KP~~~~~~~~~~~~~~~p~~  167 (198)
T TIGR01428        92 PPHPDVPAGLRALKERGYRLAILSNGSPAML-KSLVKHAGLDDPFDAVLSADAV---RAYKPAPQVYQLALEALGVPPDE  167 (198)
T ss_pred             CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHCCChhhhheeEehhhc---CCCCCCHHHHHHHHHHhCCChhh
Confidence            4567888999999874345788999887542 2234456666677766554433   35899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      |+||||++ +|+.+|+++||++|+|..+.
T Consensus       168 ~~~vgD~~-~Di~~A~~~G~~~i~v~r~~  195 (198)
T TIGR01428       168 VLFVASNP-WDLGGAKKFGFKTAWVNRPG  195 (198)
T ss_pred             EEEEeCCH-HHHHHHHHCCCcEEEecCCC
Confidence            99999995 99999999999999998753

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.50  E-value=6.9e-15  Score=122.14  Aligned_cols=124  Identities=10%  Similarity=0.014  Sum_probs=90.6

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHH-HHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG-AFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~-~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      .|+.+...+..|+   -.+.|+||.+.... ...+...++..+|+ .+.+.....   .+||+|++|..++++++++|++
T Consensus        89 ~~~gv~~~L~~L~---~~~~ivTn~~~~~~-~~~l~~~~l~~~F~~~v~~~~~~~---~~KP~p~~~~~a~~~~~~~p~~  161 (221)
T PRK10563         89 PIAGANALLESIT---VPMCVVSNGPVSKM-QHSLGKTGMLHYFPDKLFSGYDIQ---RWKPDPALMFHAAEAMNVNVEN  161 (221)
T ss_pred             cCCCHHHHHHHcC---CCEEEEeCCcHHHH-HHHHHhcChHHhCcceEeeHHhcC---CCCCChHHHHHHHHHcCCCHHH
Confidence            4566777777663   46788899876432 22445567777774 333332222   4899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      |+||||+ ..||++|+++|++++++.++.+... ..     ..++.+++++.||.+++.
T Consensus       162 ~l~igDs-~~di~aA~~aG~~~i~~~~~~~~~~-~~-----~~~~~~~~~~~~l~~~~~  213 (221)
T PRK10563        162 CILVDDS-SAGAQSGIAAGMEVFYFCADPHNKP-ID-----HPLVTTFTDLAQLPELWK  213 (221)
T ss_pred             eEEEeCc-HhhHHHHHHCCCEEEEECCCCCCcc-hh-----hhhhHHHHHHHHHHHHHH
Confidence            9999999 5999999999999999987654422 11     345667889999887654

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.49  E-value=2e-14  Score=117.79  Aligned_cols=99  Identities=21%  Similarity=0.143  Sum_probs=77.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+++..|++.+..++|+||.+...  ...+...|+..+|+.+..+..   ...+||+|.+|..+++++|++|++
T Consensus       105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~--~~~l~~~~l~~~fd~i~~s~~---~~~~KP~~~~~~~~~~~~~~~~~~  179 (203)
T TIGR02252       105 QVYPDAIKLLKDLRERGLILGVISNFDSRL--RGLLEALGLLEYFDFVVTSYE---VGAEKPDPKIFQEALERAGISPEE  179 (203)
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCchhH--HHHHHHCCcHHhcceEEeecc---cCCCCCCHHHHHHHHHHcCCChhH
Confidence            356788899999986444578999987633  223445666667766655443   335899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEE
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLL  219 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~  219 (257)
                      ++||||++.+||++|+++|+++||
T Consensus       180 ~~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       180 ALHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             EEEECCCchHHHHHHHHcCCeeeC
Confidence            999999966899999999999985

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.48  E-value=8.4e-14  Score=127.79  Aligned_cols=126  Identities=17%  Similarity=0.155  Sum_probs=98.4

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.++.|++.+..+.|+||+..... ...+...++..+|+.+.+.....    +||+|++|..++++++  |++
T Consensus       330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~-~~~l~~~~l~~~f~~i~~~d~v~----~~~kP~~~~~al~~l~--~~~  402 (459)
T PRK06698        330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYL-RAIVSYYDLDQWVTETFSIEQIN----SLNKSDLVKSILNKYD--IKE  402 (459)
T ss_pred             CcCCCHHHHHHHHHHCCCeEEEEeCCchHHH-HHHHHHCCcHhhcceeEecCCCC----CCCCcHHHHHHHHhcC--cce
Confidence            4578888999999875455889999888653 33445667777777765543322    4788889999998864  689


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      |+||||+ .+|+++|+++|+.+|+|.||....++.      ..|+++++++.|+.+++..
T Consensus       403 ~v~VGDs-~~Di~aAk~AG~~~I~v~~~~~~~~~~------~~~d~~i~~l~el~~~l~~  455 (459)
T PRK06698        403 AAVVGDR-LSDINAAKDNGLIAIGCNFDFAQEDEL------AQADIVIDDLLELKGILST  455 (459)
T ss_pred             EEEEeCC-HHHHHHHHHCCCeEEEEeCCCCccccc------CCCCEEeCCHHHHHHHHHH
Confidence            9999999 599999999999999999987654432      3699999999999998765

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.46  E-value=4.1e-14  Score=110.26  Aligned_cols=106  Identities=18%  Similarity=0.213  Sum_probs=72.6

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCcccc--------------CCCcccccCchHHHHHHhccC-CCccccCCCcHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHL--------------TDAQEWAGGGSMVGAFVGSTQ-REPLVVGKPSTF  180 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~--------------~~~~~~~~~g~~~~~i~~~~~-~~~~~~gKP~p~  180 (257)
                      ..|+.+.++++.|++.+..++|+||++.....              ...+...++.. ...+....+ .+....+||+|+
T Consensus        27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~~~~~KP~~~  105 (147)
T TIGR01656        27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAV-DGVLFCPHHPADNCSCRKPKPG  105 (147)
T ss_pred             EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCce-eEEEECCCCCCCCCCCCCCCHH
Confidence            35778889999998755557889998752110              00011112110 000111111 112234799999


Q ss_pred             HHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccC
Q 025117          181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG  223 (257)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G  223 (257)
                      +|+.++++++++|++|+||||+ ..||++|+++|+++|||..|
T Consensus       106 ~~~~~~~~~~~~~~e~i~IGDs-~~Di~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656       106 LILEALKRLGVDASRSLVVGDR-LRDLQAARNAGLAAVLLVDG  147 (147)
T ss_pred             HHHHHHHHcCCChHHEEEEcCC-HHHHHHHHHCCCCEEEecCC
Confidence            9999999999999999999999 79999999999999999865

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.45  E-value=3.4e-13  Score=104.00  Aligned_cols=100  Identities=23%  Similarity=0.286  Sum_probs=70.5

Q ss_pred             EEeccCCCCHHHHHHHHHHHHcCCCc-eEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHH
Q 025117          109 VVGFDRYFNYYKVQYGTLCIRENPGC-LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLAN  187 (257)
Q Consensus       109 v~~~d~~~~~~~~~~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~  187 (257)
                      ++.++..-.-+.+..=+..++. .|+ .+|+||.... ........+|.-    ++        ...+||.+.-|..|++
T Consensus        39 Lv~wd~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~-RV~~~~~~l~v~----fi--------~~A~KP~~~~fr~Al~  104 (175)
T COG2179          39 LVPWDNPDATPELRAWLAELKE-AGIKVVVVSNNKES-RVARAAEKLGVP----FI--------YRAKKPFGRAFRRALK  104 (175)
T ss_pred             eecccCCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHH-HHHhhhhhcCCc----ee--------ecccCccHHHHHHHHH
Confidence            4455544445666666667776 455 5666775442 111111222211    11        2248999999999999


Q ss_pred             HhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEcc
Q 025117          188 KFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS  222 (257)
Q Consensus       188 ~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~  222 (257)
                      +++++|++|+||||++.|||.+|+++||+||+|..
T Consensus       105 ~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P  139 (175)
T COG2179         105 EMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP  139 (175)
T ss_pred             HcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence            99999999999999999999999999999999964

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.43  E-value=1e-13  Score=114.23  Aligned_cols=110  Identities=14%  Similarity=0.042  Sum_probs=79.5

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccc-cCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTH-LTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~-~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~  194 (257)
                      ..|+.+.+.+..|++.+-.++|+||...... ........++..+|+.+..+   .....+||+|.+|..+++++|++|+
T Consensus        94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s---~~~~~~KP~p~~~~~~~~~~g~~~~  170 (211)
T TIGR02247        94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVES---CLEGLRKPDPRIYQLMLERLGVAPE  170 (211)
T ss_pred             ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEe---eecCCCCCCHHHHHHHHHHcCCCHH
Confidence            3578888999999874445778899754321 11111223444455544432   3334589999999999999999999


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhh
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSM  229 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~  229 (257)
                      +|+||||+ ..||.+|+++||++|+|.++....+.
T Consensus       171 ~~l~i~D~-~~di~aA~~aG~~~i~v~~~~~~~~~  204 (211)
T TIGR02247       171 ECVFLDDL-GSNLKPAAALGITTIKVSDEEQAIHD  204 (211)
T ss_pred             HeEEEcCC-HHHHHHHHHcCCEEEEECCHHHHHHH
Confidence            99999999 79999999999999999876544433

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.41  E-value=2.6e-13  Score=134.94  Aligned_cols=123  Identities=16%  Similarity=0.178  Sum_probs=96.5

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCc-hHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGG-SMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g-~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      .|+.+.+.+..|++.+-.+.|+||.+.... ...+...++. .+|+.+..+.   ....+||+|++|..++++++++|++
T Consensus       162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~-~~~L~~~gl~~~~Fd~iv~~~---~~~~~KP~Pe~~~~a~~~lgv~p~e  237 (1057)
T PLN02919        162 GFPGALELITQCKNKGLKVAVASSADRIKV-DANLAAAGLPLSMFDAIVSAD---AFENLKPAPDIFLAAAKILGVPTSE  237 (1057)
T ss_pred             cCccHHHHHHHHHhCCCeEEEEeCCcHHHH-HHHHHHcCCChhHCCEEEECc---ccccCCCCHHHHHHHHHHcCcCccc
Confidence            577889999999874445788999877543 2233455653 4555554433   3345899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF  249 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el  249 (257)
                      |+||||+ ..||++|+++||++|+|.+|. ..+++..    ..|+++++++.|+
T Consensus       238 ~v~IgDs-~~Di~AA~~aGm~~I~v~~~~-~~~~L~~----~~a~~vi~~l~el  285 (1057)
T PLN02919        238 CVVIEDA-LAGVQAARAAGMRCIAVTTTL-SEEILKD----AGPSLIRKDIGNI  285 (1057)
T ss_pred             EEEEcCC-HHHHHHHHHcCCEEEEECCCC-CHHHHhh----CCCCEEECChHHC
Confidence            9999999 599999999999999999986 4455543    6899999999996

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.41  E-value=1.7e-13  Score=110.36  Aligned_cols=99  Identities=16%  Similarity=0.068  Sum_probs=76.0

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+.++.|++.+-...|+||+...   ...+...++..+|+.+..+..   ...+||+|++|..++++++++|++
T Consensus        87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~~---~~~l~~~~l~~~f~~~~~~~~---~~~~kp~p~~~~~~~~~~~~~~~~  160 (185)
T TIGR01990        87 DVLPGIKNLLDDLKKNNIKIALASASKNA---PTVLEKLGLIDYFDAIVDPAE---IKKGKPDPEIFLAAAEGLGVSPSE  160 (185)
T ss_pred             ccCccHHHHHHHHHHCCCeEEEEeCCccH---HHHHHhcCcHhhCcEEEehhh---cCCCCCChHHHHHHHHHcCCCHHH
Confidence            35678889999998754457788886432   123445566666665544332   334899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEc
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVL  221 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~  221 (257)
                      |+||||+ ..|+++|+++||++|+|.
T Consensus       161 ~v~vgD~-~~di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       161 CIGIEDA-QAGIEAIKAAGMFAVGVG  185 (185)
T ss_pred             eEEEecC-HHHHHHHHHcCCEEEecC
Confidence            9999999 699999999999999874

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.40  E-value=2.5e-13  Score=109.04  Aligned_cols=98  Identities=19%  Similarity=0.140  Sum_probs=74.8

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..|++.+..++|+||.+...  .......|+..+|+.+..+.   ....+||+|.+|..++++++++|++|
T Consensus        86 ~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~--~~~~~~~~l~~~f~~i~~~~---~~~~~KP~~~~~~~~~~~~~~~~~~~  160 (183)
T TIGR01509        86 PLPGVEPLLEALRARGKKLALLTNSPRDH--AVLVQELGLRDLFDVVIFSG---DVGRGKPDPDIYLLALKKLGLKPEEC  160 (183)
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCchHH--HHHHHhcCCHHHCCEEEEcC---CCCCCCCCHHHHHHHHHHcCCCcceE
Confidence            46778888888886444578899988744  11212256655555544332   23458999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEE
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLV  220 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V  220 (257)
                      +||||+ ..||.+|+++|+.+|+|
T Consensus       161 ~~vgD~-~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       161 LFVDDS-PAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             EEEcCC-HHHHHHHHHcCCEEEeC
Confidence            999999 58999999999999985

HAD subfamilies caused by an overly broad single model.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.39  E-value=2.5e-13  Score=109.57  Aligned_cols=100  Identities=20%  Similarity=0.181  Sum_probs=76.4

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCc-cccCCCcHHHHHHHHHHhCCCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP-LVVGKPSTFMMDYLANKFGIQKS  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~-~~~gKP~p~~~~~~~~~~~~~~~  194 (257)
                      ..++.+.+.+..|+   ...+|+||...... ...+...|+..+|+.+..+..... ....||+|++|..+++++|++|+
T Consensus        84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~-~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~  159 (184)
T TIGR01993        84 KPDPELRNLLLRLP---GRKIIFTNGDRAHA-RRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE  159 (184)
T ss_pred             CCCHHHHHHHHhCC---CCEEEEeCCCHHHH-HHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence            35677888887775   45788999887543 334455677667776655443321 11259999999999999999999


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEE
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLV  220 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V  220 (257)
                      +++||||+ .+||++|+++|+++|+|
T Consensus       160 ~~l~vgD~-~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       160 RAIFFDDS-ARNIAAAKALGMKTVLV  184 (184)
T ss_pred             ceEEEeCC-HHHHHHHHHcCCEEeeC
Confidence            99999999 59999999999999986

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.39  E-value=6.5e-13  Score=110.41  Aligned_cols=130  Identities=16%  Similarity=0.127  Sum_probs=97.2

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      ..+.+.+.+..|+.++-...++||..+.. ....+...|+-.+|+.+.+......   +||+|++|..+.+++|++|++|
T Consensus        87 ~~pGv~~~l~~L~~~~i~~avaS~s~~~~-~~~~L~~~gl~~~f~~~v~~~dv~~---~KP~Pd~yL~Aa~~Lgv~P~~C  162 (221)
T COG0637          87 PIPGVVELLEQLKARGIPLAVASSSPRRA-AERVLARLGLLDYFDVIVTADDVAR---GKPAPDIYLLAAERLGVDPEEC  162 (221)
T ss_pred             CCccHHHHHHHHHhcCCcEEEecCChHHH-HHHHHHHccChhhcchhccHHHHhc---CCCCCHHHHHHHHHcCCChHHe
Confidence            45677888889987444466777776533 2234456677778888777665554   7999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCC--hhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTS--LSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~--~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +.|+|+ ...|++|++|||++|.|..+...  .....    ....+....++.++...+..
T Consensus       163 vviEDs-~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~  218 (221)
T COG0637         163 VVVEDS-PAGIQAAKAAGMRVVGVPAGHDRPHLDPLD----AHGADTVLLDLAELPALLEA  218 (221)
T ss_pred             EEEecc-hhHHHHHHHCCCEEEEecCCCCccccchhh----hhhcchhhccHHHHHHHHHh
Confidence            999999 69999999999999999984332  12211    24567778888888766553

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.38  E-value=1.1e-13  Score=109.68  Aligned_cols=99  Identities=22%  Similarity=0.221  Sum_probs=77.0

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..|++.+..++++||.+.... ...+...|+..+|+.+.....   ....||+|.+|+.++++++++|++|
T Consensus        78 ~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~-~~~l~~~~~~~~f~~i~~~~~---~~~~Kp~~~~~~~~~~~~~~~p~~~  153 (176)
T PF13419_consen   78 PYPGVRELLERLKAKGIPLVIVSNGSRERI-ERVLERLGLDDYFDEIISSDD---VGSRKPDPDAYRRALEKLGIPPEEI  153 (176)
T ss_dssp             ESTTHHHHHHHHHHTTSEEEEEESSEHHHH-HHHHHHTTHGGGCSEEEEGGG---SSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred             hhhhhhhhhhhcccccceeEEeecCCcccc-cccccccccccccccccccch---hhhhhhHHHHHHHHHHHcCCCcceE
Confidence            456678888889865555778899876432 223445566656665554433   3348999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEE
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLV  220 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V  220 (257)
                      +||||++ .|+++|+++||.+|+|
T Consensus       154 ~~vgD~~-~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  154 LFVGDSP-SDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             EEEESSH-HHHHHHHHTTSEEEEE
T ss_pred             EEEeCCH-HHHHHHHHcCCeEEeC
Confidence            9999995 9999999999999987

...

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.38  E-value=8.1e-12  Score=108.47  Aligned_cols=107  Identities=15%  Similarity=0.100  Sum_probs=81.6

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCch-HHHHHHhccCCC----ccccCCCcHHHHHHHHHHhC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGS-MVGAFVGSTQRE----PLVVGKPSTFMMDYLANKFG  190 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~-~~~~i~~~~~~~----~~~~gKP~p~~~~~~~~~~~  190 (257)
                      ..++.+.+.++.|++.+..++|+||++.... ...+..++... +|+.+.......    ...-+||+|.++..++++++
T Consensus       187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~-~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~  265 (300)
T PHA02530        187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCE-EDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKI  265 (300)
T ss_pred             CCChhHHHHHHHHHhCCCEEEEEeCCChhhH-HHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHh
Confidence            4578888899999875445788999988653 22344555554 667666554110    11237999999999999998


Q ss_pred             C-CCCcEEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          191 I-QKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       191 ~-~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      . ++++|+||||+ .+|+++|+++|+.+++|.||-
T Consensus       266 ~~~~~~~~~vgD~-~~d~~~a~~~Gi~~i~v~~g~  299 (300)
T PHA02530        266 APKYDVLLAVDDR-DQVVDMWRRIGLECWQVAPGD  299 (300)
T ss_pred             ccCceEEEEEcCc-HHHHHHHHHhCCeEEEecCCC
Confidence            8 67999999999 699999999999999999984

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.37  E-value=2.6e-13  Score=107.16  Aligned_cols=110  Identities=16%  Similarity=0.110  Sum_probs=77.0

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCcccc--------------CCCcccccCchHHHHHHhcc--CCCccccCCCcH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHL--------------TDAQEWAGGGSMVGAFVGST--QREPLVVGKPST  179 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~--------------~~~~~~~~~g~~~~~i~~~~--~~~~~~~gKP~p  179 (257)
                      ..|+.+.++++.|++.+-.++|+||++.....              ...+...|+.  |+.+..+.  ..+.....||+|
T Consensus        29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~~  106 (161)
T TIGR01261        29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPKI  106 (161)
T ss_pred             eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCCH
Confidence            45678889999998744457899998532110              0001112221  22111110  123445689999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChh
Q 025117          180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS  228 (257)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~  228 (257)
                      .+|+.++++++++|++++||||+ .+|+.+|+++|+++++|.+|.-...
T Consensus       107 ~~~~~~~~~~~~~~~e~l~IGD~-~~Di~~A~~aGi~~i~~~~~~~~~~  154 (161)
T TIGR01261       107 KLLEPYLKKNLIDKARSYVIGDR-ETDMQLAENLGIRGIQYDEEELNWD  154 (161)
T ss_pred             HHHHHHHHHcCCCHHHeEEEeCC-HHHHHHHHHCCCeEEEEChhhcCHH
Confidence            99999999999999999999999 6999999999999999999876544

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.35  E-value=5.8e-13  Score=107.63  Aligned_cols=94  Identities=16%  Similarity=0.089  Sum_probs=73.6

Q ss_pred             HHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcC
Q 025117          122 QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGD  201 (257)
Q Consensus       122 ~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD  201 (257)
                      .+.+..|++ .....|+||+..... ...+...++..+|+.+.++...   ..+||+|++|..++++++++|++|+||||
T Consensus        93 ~e~L~~L~~-~~~l~I~T~~~~~~~-~~~l~~~~l~~~fd~i~~~~~~---~~~KP~p~~~~~~~~~~~~~~~~~l~igD  167 (188)
T PRK10725         93 IEVVKAWHG-RRPMAVGTGSESAIA-EALLAHLGLRRYFDAVVAADDV---QHHKPAPDTFLRCAQLMGVQPTQCVVFED  167 (188)
T ss_pred             HHHHHHHHh-CCCEEEEcCCchHHH-HHHHHhCCcHhHceEEEehhhc---cCCCCChHHHHHHHHHcCCCHHHeEEEec
Confidence            356666765 356788999876442 2344566777777766554433   34899999999999999999999999999


Q ss_pred             ChhhHHHHHHHcCCeEEEEc
Q 025117          202 RLDTDILFGQNGGCKTLLVL  221 (257)
Q Consensus       202 ~~~~Di~~A~~aG~~ti~V~  221 (257)
                      + .+|+++|+++|+++|+|.
T Consensus       168 s-~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        168 A-DFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             c-HhhHHHHHHCCCEEEeec
Confidence            9 699999999999999985

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.35  E-value=1.5e-12  Score=107.78  Aligned_cols=103  Identities=11%  Similarity=-0.009  Sum_probs=75.0

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccc---cCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWA---GGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ  192 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~---~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~  192 (257)
                      ..|+++.++++.+++.+-.++|+||.+.... .......   ++..+++.+..     .....||+|++|..+++++|++
T Consensus        95 ~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~-~~~~~~~~~~~L~~~f~~~fd-----~~~g~KP~p~~y~~i~~~lgv~  168 (220)
T TIGR01691        95 HLYPDVPPALEAWLQLGLRLAVYSSGSVPAQ-KLLFGHSDAGNLTPYFSGYFD-----TTVGLKTEAQSYVKIAGQLGSP  168 (220)
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHhhccccchhhhcceEEE-----eCcccCCCHHHHHHHHHHhCcC
Confidence            4678889999999874445788999876431 1111111   22233332211     1123799999999999999999


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeEEEEccCCC
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVT  225 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~  225 (257)
                      |++|+||||+ ..|+.+|+++||+++++.++..
T Consensus       169 p~e~lfVgDs-~~Di~AA~~AG~~ti~v~r~g~  200 (220)
T TIGR01691       169 PREILFLSDI-INELDAARKAGLHTGQLVRPGN  200 (220)
T ss_pred             hhHEEEEeCC-HHHHHHHHHcCCEEEEEECCCC
Confidence            9999999999 6999999999999999987653

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PHA02597 30

Probab=99.34  E-value=1.3e-12  Score=106.53  Aligned_cols=120  Identities=11%  Similarity=0.064  Sum_probs=84.8

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHH-HHHhccCCCccccCCCcHHHHHHHHHHhCCCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG-AFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~-~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~  194 (257)
                      ..|+.+.+++..|++. +..+++||+..... .......++..++. .+....+.+.   .||+|++|..+++++|  |+
T Consensus        74 ~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~-~~~~~~~~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~~~--~~  146 (197)
T PHA02597         74 SAYDDALDVINKLKED-YDFVAVTALGDSID-ALLNRQFNLNALFPGAFSEVLMCGH---DESKEKLFIKAKEKYG--DR  146 (197)
T ss_pred             cCCCCHHHHHHHHHhc-CCEEEEeCCccchh-HHHHhhCCHHHhCCCcccEEEEecc---CcccHHHHHHHHHHhC--CC
Confidence            3577888899999863 56777788765321 11122334433332 1222222233   5788999999999999  88


Q ss_pred             cEEEEcCChhhHHHHHHHc--CCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHH
Q 025117          195 QICMVGDRLDTDILFGQNG--GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLS  251 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~a--G~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~  251 (257)
                      +++||||+ .+|+++|+++  ||++|+|.||..  +      ....|+|.+.++.|+..
T Consensus       147 ~~v~vgDs-~~di~aA~~a~~Gi~~i~~~~~~~--~------~~~~~~~~~~~~~~~~~  196 (197)
T PHA02597        147 VVCFVDDL-AHNLDAAHEALSQLPVIHMLRGER--D------HIPKLAHRVKSWNDIEN  196 (197)
T ss_pred             cEEEeCCC-HHHHHHHHHHHcCCcEEEecchhh--c------cccchhhhhccHHHHhc
Confidence            99999999 6999999999  999999999953  1      12467899999998863

2 hypothetical protein; Provisional

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.33  E-value=6.7e-13  Score=106.88  Aligned_cols=98  Identities=11%  Similarity=0.065  Sum_probs=74.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|++.+-...|+||. . . ....+...++..+|+.+....   .....||+|++|..++++++++|++
T Consensus        88 ~~~~g~~~~l~~l~~~g~~i~i~S~~-~-~-~~~~l~~~~l~~~f~~v~~~~---~~~~~kp~~~~~~~~~~~~~~~~~~  161 (185)
T TIGR02009        88 EVLPGIENFLKRLKKKGIAVGLGSSS-K-N-ADRILAKLGLTDYFDAIVDAD---EVKEGKPHPETFLLAAELLGVSPNE  161 (185)
T ss_pred             CCCcCHHHHHHHHHHcCCeEEEEeCc-h-h-HHHHHHHcChHHHCCEeeehh---hCCCCCCChHHHHHHHHHcCCCHHH
Confidence            46778888999998743346788887 2 1 122334556666665554433   3335899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEE
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLV  220 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V  220 (257)
                      ++||||+ .+|+++|+++|+++|.|
T Consensus       162 ~v~IgD~-~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       162 CVVFEDA-LAGVQAARAAGMFAVAV  185 (185)
T ss_pred             eEEEeCc-HhhHHHHHHCCCeEeeC
Confidence            9999999 69999999999999875

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.32  E-value=9.7e-13  Score=100.47  Aligned_cols=99  Identities=21%  Similarity=0.179  Sum_probs=69.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccc-------cCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTH-------LTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANK  188 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~-------~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~  188 (257)
                      ..|+.+.+++..|++.+-.++|+||......       ....+...++..+  .. ..++    ...||+|++|+.++++
T Consensus        25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~--~~-~~~~----~~~KP~~~~~~~~~~~   97 (132)
T TIGR01662        25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID--VL-YACP----HCRKPKPGMFLEALKR   97 (132)
T ss_pred             eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE--EE-EECC----CCCCCChHHHHHHHHH
Confidence            4578888999999874445788899873211       0111122222110  11 1111    2479999999999999


Q ss_pred             h-CCCCCcEEEEcCChhhHHHHHHHcCCeEEEEc
Q 025117          189 F-GIQKSQICMVGDRLDTDILFGQNGGCKTLLVL  221 (257)
Q Consensus       189 ~-~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~  221 (257)
                      + +++|++++||||+..+|+.+|+++|+++|++.
T Consensus        98 ~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~  131 (132)
T TIGR01662        98 FNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA  131 (132)
T ss_pred             cCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence            9 59999999999943799999999999999986

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.29  E-value=1.9e-12  Score=103.14  Aligned_cols=109  Identities=11%  Similarity=-0.029  Sum_probs=79.2

Q ss_pred             CCCHHHHHHHHHHHHcCCCceEEEecC-CCccccCCCcccccCc---------hHHHHHHhccCCCccccCCCcHHHHHH
Q 025117          115 YFNYYKVQYGTLCIRENPGCLFIATNR-DAVTHLTDAQEWAGGG---------SMVGAFVGSTQREPLVVGKPSTFMMDY  184 (257)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~~~~~i~tn~-d~~~~~~~~~~~~~~g---------~~~~~i~~~~~~~~~~~gKP~p~~~~~  184 (257)
                      ...|+.+.+.+..|++.+-..+|+||+ .... ....+...++.         .+|+.+......   ...||.+.+++.
T Consensus        44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~-~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~---~~~kp~~~i~~~  119 (174)
T TIGR01685        44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEW-AYEILGTFEITYAGKTVPMHSLFDDRIEIYKP---NKAKQLEMILQK  119 (174)
T ss_pred             EEEcccHHHHHHHHHHCCCEEEEEeCCCChHH-HHHHHHhCCcCCCCCcccHHHhceeeeeccCC---chHHHHHHHHHH
Confidence            356889999999998744457899988 3322 11122333333         666665554322   236888888888


Q ss_pred             HHHHh--CCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChh
Q 025117          185 LANKF--GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS  228 (257)
Q Consensus       185 ~~~~~--~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~  228 (257)
                      +.+.+  +++|++|+||||+ ..|+.+|+++|+.++++.+|....+
T Consensus       120 ~~~~~~~gl~p~e~l~VgDs-~~di~aA~~aGi~~i~v~~g~~~~~  164 (174)
T TIGR01685       120 VNKVDPSVLKPAQILFFDDR-TDNVREVWGYGVTSCYCPSGMDKGT  164 (174)
T ss_pred             hhhcccCCCCHHHeEEEcCh-hHhHHHHHHhCCEEEEcCCCccHHH
Confidence            88777  8999999999999 5999999999999999999875443

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.20  E-value=8.8e-12  Score=99.01  Aligned_cols=98  Identities=21%  Similarity=0.226  Sum_probs=68.1

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCcccc-----------CCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHH
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHL-----------TDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYL  185 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~-----------~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~  185 (257)
                      .|+.+.+++..|++.+-.++|+||+......           ...+...|+. + ..+   ...+....+||+|.+|..+
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~-~-~~i---i~~~~~~~~KP~p~~~~~~  117 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP-I-QVL---AATHAGLYRKPMTGMWEYL  117 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC-E-EEE---EecCCCCCCCCccHHHHHH
Confidence            4688899999998744457899998763210           0011222221 1 111   1112223589999999999


Q ss_pred             HHHhC--CCCCcEEEEcCCh-------hhHHHHHHHcCCeEEE
Q 025117          186 ANKFG--IQKSQICMVGDRL-------DTDILFGQNGGCKTLL  219 (257)
Q Consensus       186 ~~~~~--~~~~~~~~IGD~~-------~~Di~~A~~aG~~ti~  219 (257)
                      +++++  ++|++++||||+.       .+|+++|+++|+++++
T Consensus       118 ~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~  160 (166)
T TIGR01664       118 QSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY  160 (166)
T ss_pred             HHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence            99999  9999999999994       3699999999999865

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=99.15  E-value=4.6e-10  Score=88.52  Aligned_cols=113  Identities=25%  Similarity=0.289  Sum_probs=78.3

Q ss_pred             CCccEEEEeccCCC-------CHHHHHHHHHHHHcCCCc--eEEEecCCCccccCCCcccccCchHHHHHHhccCCCcc-
Q 025117          103 KDVGAVVVGFDRYF-------NYYKVQYGTLCIRENPGC--LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPL-  172 (257)
Q Consensus       103 ~~~~aVv~~~d~~~-------~~~~~~~~~~~l~~~~~~--~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~-  172 (257)
                      ..+.++++..|..+       -++.+...+..+++..+.  ++|+||.-.... .     ++ +.-...++...|.... 
T Consensus        39 ~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~-d-----~~-~~~a~~~~~~lgIpvl~  111 (168)
T PF09419_consen   39 KGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSD-D-----PD-GERAEALEKALGIPVLR  111 (168)
T ss_pred             cCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCccc-C-----cc-HHHHHHHHHhhCCcEEE
Confidence            34556666655543       346677778878764443  788999754221 1     11 2345667777777643 


Q ss_pred             -ccCCCcHHHHHHHHHHhCC-----CCCcEEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          173 -VVGKPSTFMMDYLANKFGI-----QKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       173 -~~gKP~p~~~~~~~~~~~~-----~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                       ...||  ..+..+++.++.     .|++++||||++.|||.+|+++|+.+|||..|.
T Consensus       112 h~~kKP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv  167 (168)
T PF09419_consen  112 HRAKKP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV  167 (168)
T ss_pred             eCCCCC--ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence             34688  555666666643     599999999999999999999999999999986

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.12  E-value=3.2e-10  Score=90.22  Aligned_cols=132  Identities=20%  Similarity=0.226  Sum_probs=89.0

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCc-ccc-----------cCchHHHHHHhccCC--CccccCCCcHHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQ-EWA-----------GGGSMVGAFVGSTQR--EPLVVGKPSTFM  181 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~-~~~-----------~~g~~~~~i~~~~~~--~~~~~gKP~p~~  181 (257)
                      .-.+.+..++..+++..-..+|+||.+..-.-.... ...           ..|.-++.+..+-..  +...++||+|.|
T Consensus        31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm  110 (181)
T COG0241          31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGM  110 (181)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHH
Confidence            334567788888876445578889988743110000 000           011111222222111  125789999999


Q ss_pred             HHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          182 MDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       182 ~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      +..+++++++++++.+||||+ .+|+++|.++|++++++.+|......-.     ...+++++++.++..++
T Consensus       111 ~~~~~~~~~iD~~~s~~VGD~-~~Dlq~a~n~gi~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  176 (181)
T COG0241         111 LLSALKEYNIDLSRSYVVGDR-LTDLQAAENAGIKGVLVLTGIGVTTDGA-----GRAKWVFDSLAEFANLI  176 (181)
T ss_pred             HHHHHHHhCCCccceEEecCc-HHHHHHHHHCCCCceEEEcCcccccccc-----cccccccccHHHHHHHH
Confidence            999999999999999999999 5999999999999999999876543221     25677888888887443

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.09  E-value=9.9e-10  Score=96.84  Aligned_cols=112  Identities=18%  Similarity=0.146  Sum_probs=76.0

Q ss_pred             CCCHHHHHHHHHHHHcCCCceEEEecCCCcc---ccCCC-----------cccccCchHHHHHHhcc--CCCccccCCCc
Q 025117          115 YFNYYKVQYGTLCIRENPGCLFIATNRDAVT---HLTDA-----------QEWAGGGSMVGAFVGST--QREPLVVGKPS  178 (257)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~---~~~~~-----------~~~~~~g~~~~~i~~~~--~~~~~~~gKP~  178 (257)
                      ...|+.+.+.+..|++.+..++|+||++..-   .....           +...++  +++.+..+.  +.+....+||+
T Consensus        29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl--~fd~i~i~~~~~sd~~~~rKP~  106 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGI--KFDEVLICPHFPEDNCSCRKPK  106 (354)
T ss_pred             ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCC--ceeeEEEeCCcCcccCCCCCCC
Confidence            4568888999999987444578999974210   00000           011111  111111110  11233468999


Q ss_pred             HHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhh
Q 025117          179 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSM  229 (257)
Q Consensus       179 p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~  229 (257)
                      |.++..++++++++|++++||||+ .+|+++|+++||++|+|.......++
T Consensus       107 p~~l~~a~~~l~v~~~~svmIGDs-~sDi~aAk~aGi~~I~v~~~~~~~~~  156 (354)
T PRK05446        107 TGLVEEYLAEGAIDLANSYVIGDR-ETDVQLAENMGIKGIRYARETLNWDA  156 (354)
T ss_pred             HHHHHHHHHHcCCCcccEEEEcCC-HHHHHHHHHCCCeEEEEECCCCCHHH
Confidence            999999999999999999999999 69999999999999999765544443

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.08  E-value=3.9e-11  Score=95.84  Aligned_cols=74  Identities=14%  Similarity=0.131  Sum_probs=59.3

Q ss_pred             eEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHc
Q 025117          135 LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG  213 (257)
Q Consensus       135 ~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~a  213 (257)
                      +.|+||.+.... ...+...++..+|+.+.++...   ..+||+|++|..+++++|++|++|+||||+ .+||.+|+++
T Consensus       102 ~~i~Tn~~~~~~-~~~l~~~~l~~~fd~v~~~~~~---~~~KP~p~~f~~~~~~~~~~p~~~l~vgD~-~~Di~~A~~~  175 (175)
T TIGR01493       102 VAILSNASHWAF-DQFAQQAGLPWYFDRAFSVDTV---RAYKPDPVVYELVFDTVGLPPDRVLMVAAH-QWDLIGARKF  175 (175)
T ss_pred             HhhhhCCCHHHH-HHHHHHCCCHHHHhhhccHhhc---CCCCCCHHHHHHHHHHHCCCHHHeEeEecC-hhhHHHHhcC
Confidence            578899887543 2244566788888877654433   348999999999999999999999999999 6999999874

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.01  E-value=4.2e-10  Score=87.93  Aligned_cols=88  Identities=17%  Similarity=0.066  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEE
Q 025117          119 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM  198 (257)
Q Consensus       119 ~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~  198 (257)
                      +.+.+.+..|++.+...+|+||.+..... ..+... +..+|+.   ..+.+... +||+|++|..++++++++| +|+|
T Consensus        67 ~g~~e~l~~L~~~g~~~~i~T~~~~~~~~-~~~~~~-l~~~f~~---i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~  139 (154)
T TIGR01549        67 RGAADLLKRLKEAGIKLGIISNGSLRAQK-LLLRKH-LGDYFDL---ILGSDEFG-AKPEPEIFLAALESLGLPP-EVLH  139 (154)
T ss_pred             cCHHHHHHHHHHCcCeEEEEeCCchHHHH-HHHHHH-HHhcCcE---EEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEE
Confidence            45778888887644457889998875422 121221 3333333   23333344 8999999999999999999 9999


Q ss_pred             EcCChhhHHHHHHHcC
Q 025117          199 VGDRLDTDILFGQNGG  214 (257)
Q Consensus       199 IGD~~~~Di~~A~~aG  214 (257)
                      |||+ ..|+++|+++|
T Consensus       140 iGDs-~~Di~aa~~aG  154 (154)
T TIGR01549       140 VGDN-LNDIEGARNAG  154 (154)
T ss_pred             EeCC-HHHHHHHHHcc
Confidence            9999 79999999997

HAD subfamilies caused by an overly broad single model.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.00  E-value=3e-10  Score=92.69  Aligned_cols=86  Identities=17%  Similarity=0.156  Sum_probs=64.6

Q ss_pred             HHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcC
Q 025117          122 QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGD  201 (257)
Q Consensus       122 ~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD  201 (257)
                      .+.+..|++.+-.+.|+||++.... ...+...|+..+|+.+.+..   .... ||+|++|..++++++++|++|+||||
T Consensus       112 ~~~L~~l~~~g~~~~i~T~~~~~~~-~~~l~~~gl~~~f~~~~~~~---~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD  186 (197)
T TIGR01548       112 KGLLRELHRAPKGMAVVTGRPRKDA-AKFLTTHGLEILFPVQIWME---DCPP-KPNPEPLILAAKALGVEACHAAMVGD  186 (197)
T ss_pred             HHHHHHHHHcCCcEEEECCCCHHHH-HHHHHHcCchhhCCEEEeec---CCCC-CcCHHHHHHHHHHhCcCcccEEEEeC
Confidence            5677778764445788999987543 33445667666666554433   2223 99999999999999999999999999


Q ss_pred             ChhhHHHHHHHc
Q 025117          202 RLDTDILFGQNG  213 (257)
Q Consensus       202 ~~~~Di~~A~~a  213 (257)
                      + .+||++|+++
T Consensus       187 ~-~~Di~aA~~a  197 (197)
T TIGR01548       187 T-VDDIITGRKA  197 (197)
T ss_pred             C-HHHHHHHHhC
Confidence            9 5999999975

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PLN02954 phosphoserine phosphatase

Probab=98.92  E-value=2e-09  Score=89.40  Aligned_cols=128  Identities=13%  Similarity=0.169  Sum_probs=82.2

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCch--HHHH-HHh-----ccCC---CccccCCCcHHHHHHH
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGS--MVGA-FVG-----STQR---EPLVVGKPSTFMMDYL  185 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~--~~~~-i~~-----~~~~---~~~~~gKP~p~~~~~~  185 (257)
                      .|+.+.+.+..+++++-.++|+||+..... ...+...|+..  ++.. +..     ..+.   +....++|+|..+..+
T Consensus        85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i-~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~  163 (224)
T PLN02954         85 LSPGIPELVKKLRARGTDVYLVSGGFRQMI-APVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHI  163 (224)
T ss_pred             CCccHHHHHHHHHHCCCEEEEECCCcHHHH-HHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHH
Confidence            456788888888874334678898876442 22223334321  1110 000     0111   1112367788999999


Q ss_pred             HHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          186 ANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       186 ~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      +++++.  ++++||||+ .+|+.+|+++|+..+...+|....+...     ..|+++++++.+|.+++
T Consensus       164 ~~~~~~--~~~i~iGDs-~~Di~aa~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~el~~~~  223 (224)
T PLN02954        164 KKKHGY--KTMVMIGDG-ATDLEARKPGGADLFIGYGGVQVREAVA-----AKADWFVTDFQDLIEVL  223 (224)
T ss_pred             HHHcCC--CceEEEeCC-HHHHHhhhcCCCCEEEecCCCccCHHHH-----hcCCEEECCHHHHHHhh
Confidence            988875  689999999 6999999999988765544333323222     46899999999998765

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=98.92  E-value=6.5e-10  Score=92.04  Aligned_cols=125  Identities=17%  Similarity=0.116  Sum_probs=81.0

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhc-----cC--CCccccCCCcHHHHHHHHHHh
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGS-----TQ--REPLVVGKPSTFMMDYLANKF  189 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~-----~~--~~~~~~gKP~p~~~~~~~~~~  189 (257)
                      .++.+.+.+..+++.+...+|+||...... ...+...++..++......     ++  ......++|+|.+|+.+++++
T Consensus        86 ~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~-~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~  164 (219)
T TIGR00338        86 LTEGAEELVKTLKEKGYKVAVISGGFDLFA-EHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKE  164 (219)
T ss_pred             cCCCHHHHHHHHHHCCCEEEEECCCcHHHH-HHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHHc
Confidence            466777888888874445788898765332 1122233433332111000     00  111233678999999999999


Q ss_pred             CCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEEC--ChhhHHHHH
Q 025117          190 GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN--KISDFLSLK  253 (257)
Q Consensus       190 ~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~--~l~el~~~l  253 (257)
                      +++|++|+||||+ .+|+.+|+++|+..+ +. |   .+.+.     ..+++++.  ++.+++.+|
T Consensus       165 ~~~~~~~i~iGDs-~~Di~aa~~ag~~i~-~~-~---~~~~~-----~~a~~~i~~~~~~~~~~~~  219 (219)
T TIGR00338       165 GISPENTVAVGDG-ANDLSMIKAAGLGIA-FN-A---KPKLQ-----QKADICINKKDLTDILPLL  219 (219)
T ss_pred             CCCHHHEEEEECC-HHHHHHHHhCCCeEE-eC-C---CHHHH-----HhchhccCCCCHHHHHhhC
Confidence            9999999999999 699999999999753 22 2   22333     36788866  778887653

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.89  E-value=2.2e-09  Score=86.55  Aligned_cols=101  Identities=20%  Similarity=0.147  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCC---ccccCCCcHHHHHHHHHHhCCC-CCc
Q 025117          120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQRE---PLVVGKPSTFMMDYLANKFGIQ-KSQ  195 (257)
Q Consensus       120 ~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~---~~~~gKP~p~~~~~~~~~~~~~-~~~  195 (257)
                      .++..+.-|+.  ....+.||.++... ...+..+|+...|+.+.......   ..++-||++.+|+.+++..|+. |.+
T Consensus       104 ~LRnlLL~l~~--r~k~~FTNa~k~HA-~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p~~  180 (244)
T KOG3109|consen  104 VLRNLLLSLKK--RRKWIFTNAYKVHA-IRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRN  180 (244)
T ss_pred             HHHHHHHhCcc--ccEEEecCCcHHHH-HHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCcCc
Confidence            45555555543  22788899999654 44667788877777776554333   4677899999999999999998 999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      ++++.|| ...|++|++.|+++++|....
T Consensus       181 t~FfDDS-~~NI~~ak~vGl~tvlv~~~~  208 (244)
T KOG3109|consen  181 TYFFDDS-ERNIQTAKEVGLKTVLVGREH  208 (244)
T ss_pred             eEEEcCc-hhhHHHHHhccceeEEEEeee
Confidence            9999999 799999999999999998654

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=98.89  E-value=4.4e-09  Score=87.98  Aligned_cols=103  Identities=14%  Similarity=0.018  Sum_probs=70.0

Q ss_pred             CCCHHHHHHHHHHHHcCCCceEEEecCCCc---cccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCC
Q 025117          115 YFNYYKVQYGTLCIRENPGCLFIATNRDAV---THLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGI  191 (257)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~---~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~  191 (257)
                      ...++...+.++.+++++..++|+||+...   ......+..+|+..+++.+.   +.+.....||+|.   .+++++++
T Consensus       113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~---~~d~~~~~Kp~~~---~~l~~~~i  186 (237)
T TIGR01672       113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIF---AGDKPGQYQYTKT---QWIQDKNI  186 (237)
T ss_pred             CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEE---CCCCCCCCCCCHH---HHHHhCCC
Confidence            356666888888888755568899998431   11122233456655554433   3333233788875   35566665


Q ss_pred             CCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChh
Q 025117          192 QKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS  228 (257)
Q Consensus       192 ~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~  228 (257)
                          ++||||+ ..||.+|+++|+++|.|.||.++..
T Consensus       187 ----~i~vGDs-~~DI~aAk~AGi~~I~V~~g~~s~~  218 (237)
T TIGR01672       187 ----RIHYGDS-DNDITAAKEAGARGIRILRASNSTY  218 (237)
T ss_pred             ----eEEEeCC-HHHHHHHHHCCCCEEEEEecCCCCC
Confidence                7999999 6999999999999999999987654

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=98.87  E-value=2.2e-09  Score=84.21  Aligned_cols=101  Identities=17%  Similarity=0.157  Sum_probs=72.9

Q ss_pred             HHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCCh
Q 025117          124 GTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRL  203 (257)
Q Consensus       124 ~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~  203 (257)
                      +++.|++++-.++|+||+..... ...+...|+..++.            ..||+|.++..+++++++++++|+||||+ 
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~-~~~l~~~gi~~~~~------------~~~~k~~~~~~~~~~~~~~~~~~~~vGDs-  101 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLV-EDRCKTLGITHLYQ------------GQSNKLIAFSDILEKLALAPENVAYIGDD-  101 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHH-HHHHHHcCCCEEEe------------cccchHHHHHHHHHHcCCCHHHEEEECCC-
Confidence            77888874445788999876432 22223333332221            14899999999999999999999999999 


Q ss_pred             hhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChh
Q 025117          204 DTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKIS  247 (257)
Q Consensus       204 ~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~  247 (257)
                      .+|+.+++++|+. +.|.++..   .+.     ..|++++++..
T Consensus       102 ~~D~~~~~~ag~~-~~v~~~~~---~~~-----~~a~~i~~~~~  136 (154)
T TIGR01670       102 LIDWPVMEKVGLS-VAVADAHP---LLI-----PRADYVTRIAG  136 (154)
T ss_pred             HHHHHHHHHCCCe-EecCCcCH---HHH-----HhCCEEecCCC
Confidence            5999999999996 77776642   232     35888887664

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.84  E-value=5.3e-09  Score=78.88  Aligned_cols=103  Identities=22%  Similarity=0.228  Sum_probs=74.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCC-------------ccccCCCcHHHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQRE-------------PLVVGKPSTFMM  182 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~-------------~~~~gKP~p~~~  182 (257)
                      ..++.+.+.+..+++++...+|+||...... .......++..+++.+....+..             ....+||++..+
T Consensus        24 ~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (139)
T cd01427          24 ELYPGVKEALKELKEKGIKLALATNKSRREV-LELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL  102 (139)
T ss_pred             CcCcCHHHHHHHHHHCCCeEEEEeCchHHHH-HHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence            4567788888888875445788898875442 22223344444455444332221             233459999999


Q ss_pred             HHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEE
Q 025117          183 DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV  220 (257)
Q Consensus       183 ~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V  220 (257)
                      ..+++.++.+++++++|||+ .+|+.+|+++|+.+++|
T Consensus       103 ~~~~~~~~~~~~~~~~igD~-~~d~~~~~~~g~~~i~v  139 (139)
T cd01427         103 LAALKLLGVDPEEVLMVGDS-LNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             HHHHHHcCCChhhEEEeCCC-HHHHHHHHHcCCceeeC
Confidence            99999999999999999999 59999999999999875

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=98.80  E-value=9.6e-09  Score=84.71  Aligned_cols=121  Identities=14%  Similarity=0.109  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhc--cCCCccccCCCcHHHHHHHHHHhCCCC-Cc
Q 025117          119 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGS--TQREPLVVGKPSTFMMDYLANKFGIQK-SQ  195 (257)
Q Consensus       119 ~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~--~~~~~~~~gKP~p~~~~~~~~~~~~~~-~~  195 (257)
                      +..+..+..|..++-.+.++||.++.....   ..-..+.++..+...  .+...+..|||+|++|..++++++.+| +.
T Consensus        95 PGa~kLv~~L~~~gip~alat~s~~~~~~~---k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k  171 (222)
T KOG2914|consen   95 PGAEKLVNHLKNNGIPVALATSSTSASFEL---KISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSK  171 (222)
T ss_pred             CcHHHHHHHHHhCCCCeeEEecCCcccHHH---HHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccc
Confidence            367788888876433477889987644211   222223344444321  122345668999999999999999988 99


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF  249 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el  249 (257)
                      |++++|+ ...+++|++|||..|+|.+..-...      ....++.+++++.+.
T Consensus       172 ~lVfeds-~~Gv~aa~aagm~vi~v~~~~~~~~------~~~~~~~~~~~~~~~  218 (222)
T KOG2914|consen  172 CLVFEDS-PVGVQAAKAAGMQVVGVATPDLSNL------FSAGATLILESLEDF  218 (222)
T ss_pred             eEEECCC-HHHHHHHHhcCCeEEEecCCCcchh------hhhccceeccccccc
Confidence            9999999 5999999999999999998221111      124567777766553

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=98.70  E-value=2.7e-08  Score=80.33  Aligned_cols=108  Identities=20%  Similarity=0.234  Sum_probs=73.4

Q ss_pred             HHHHHHHcCCCc-eEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcC
Q 025117          123 YGTLCIRENPGC-LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGD  201 (257)
Q Consensus       123 ~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD  201 (257)
                      .++..+++ .|+ ..|+||+..... ...+...++..++.      +      .+|.+..+..+++++|+++++++||||
T Consensus        55 ~~i~~L~~-~Gi~v~I~T~~~~~~v-~~~l~~lgl~~~f~------g------~~~k~~~l~~~~~~~gl~~~ev~~VGD  120 (183)
T PRK09484         55 YGIRCLLT-SGIEVAIITGRKSKLV-EDRMTTLGITHLYQ------G------QSNKLIAFSDLLEKLAIAPEQVAYIGD  120 (183)
T ss_pred             HHHHHHHH-CCCEEEEEeCCCcHHH-HHHHHHcCCceeec------C------CCcHHHHHHHHHHHhCCCHHHEEEECC
Confidence            45666665 455 668899866432 21222333322221      1      466789999999999999999999999


Q ss_pred             ChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEEC------ChhhHHHHHH
Q 025117          202 RLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN------KISDFLSLKA  254 (257)
Q Consensus       202 ~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~------~l~el~~~l~  254 (257)
                      + ..|+.+|+++|+.. .|.+    ..+...    ..|+|+++      .+.|+.+++.
T Consensus       121 s-~~D~~~a~~aG~~~-~v~~----~~~~~~----~~a~~v~~~~~g~g~~~el~~~i~  169 (183)
T PRK09484        121 D-LIDWPVMEKVGLSV-AVAD----AHPLLL----PRADYVTRIAGGRGAVREVCDLLL  169 (183)
T ss_pred             C-HHHHHHHHHCCCeE-ecCC----hhHHHH----HhCCEEecCCCCCCHHHHHHHHHH
Confidence            9 69999999999984 4532    222221    46899996      6788877653

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.67  E-value=5.6e-08  Score=81.30  Aligned_cols=101  Identities=15%  Similarity=0.094  Sum_probs=67.4

Q ss_pred             CCCHHHHHHHHHHHHcCCCceEEEecCCCccc---cCCCcccccC--chHHHHHHhccCCCccccCCCcHHHHHHHHHHh
Q 025117          115 YFNYYKVQYGTLCIRENPGCLFIATNRDAVTH---LTDAQEWAGG--GSMVGAFVGSTQREPLVVGKPSTFMMDYLANKF  189 (257)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~---~~~~~~~~~~--g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~  189 (257)
                      ...|+.+.+.++.+++++..++++||++....   ....+...|+  ..++..+.   +.+.  ..||++..   .++++
T Consensus       113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil---~gd~--~~K~~K~~---~l~~~  184 (237)
T PRK11009        113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIF---AGDK--PGQYTKTQ---WLKKK  184 (237)
T ss_pred             CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEE---cCCC--CCCCCHHH---HHHhc
Confidence            45778888999999775555888999753211   1111122444  33333222   2221  26888863   45566


Q ss_pred             CCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChh
Q 025117          190 GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS  228 (257)
Q Consensus       190 ~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~  228 (257)
                      ++    ++||||+ ..|+.+|++||+++|.|.||..+..
T Consensus       185 ~i----~I~IGDs-~~Di~aA~~AGi~~I~v~~G~~~~~  218 (237)
T PRK11009        185 NI----RIFYGDS-DNDITAAREAGARGIRILRAANSTY  218 (237)
T ss_pred             CC----eEEEcCC-HHHHHHHHHcCCcEEEEecCCCCCC
Confidence            65    8999999 6999999999999999999987543

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=98.66  E-value=1.5e-08  Score=80.50  Aligned_cols=83  Identities=16%  Similarity=0.118  Sum_probs=61.6

Q ss_pred             HHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCC
Q 025117          123 YGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDR  202 (257)
Q Consensus       123 ~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~  202 (257)
                      .++..|++.+-.+.|+||+..... ...+...++..+|+            ..||+|..+..+++++++++++++||||+
T Consensus        41 ~~~~~L~~~Gi~laIiT~k~~~~~-~~~l~~lgi~~~f~------------~~kpkp~~~~~~~~~l~~~~~ev~~iGD~  107 (169)
T TIGR02726        41 MGVIVLQLCGIDVAIITSKKSGAV-RHRAEELKIKRFHE------------GIKKKTEPYAQMLEEMNISDAEVCYVGDD  107 (169)
T ss_pred             HHHHHHHHCCCEEEEEECCCcHHH-HHHHHHCCCcEEEe------------cCCCCHHHHHHHHHHcCcCHHHEEEECCC
Confidence            466777763334678999877542 22334445443332            13899999999999999999999999999


Q ss_pred             hhhHHHHHHHcCCeEEE
Q 025117          203 LDTDILFGQNGGCKTLL  219 (257)
Q Consensus       203 ~~~Di~~A~~aG~~ti~  219 (257)
                       ..|+.+++.+|+..+.
T Consensus       108 -~nDi~~~~~ag~~~am  123 (169)
T TIGR02726       108 -LVDLSMMKRVGLAVAV  123 (169)
T ss_pred             -HHHHHHHHHCCCeEEC
Confidence             5999999999977553

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=98.65  E-value=6.8e-08  Score=73.36  Aligned_cols=88  Identities=13%  Similarity=0.020  Sum_probs=62.2

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecC-CCccccCCCccccc-------CchHHHHHHhccCCCccccCCCcHHHHHHHHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNR-DAVTHLTDAQEWAG-------GGSMVGAFVGSTQREPLVVGKPSTFMMDYLAN  187 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~-d~~~~~~~~~~~~~-------~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~  187 (257)
                      ..|+.+.+.++.|++++-.++|+||+ ..... ...+...+       +..+|+.+..   .+    .||+|.+|..+++
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~-~~~l~~~~~~~~i~~l~~~f~~~~~---~~----~~pkp~~~~~a~~  100 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVA-YELLKIFEDFGIIFPLAEYFDPLTI---GY----WLPKSPRLVEIAL  100 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHH-HHHHHhccccccchhhHhhhhhhhh---cC----CCcHHHHHHHHHH
Confidence            46899999999998744447889998 44332 11222233       3344444432   22    4799999999999


Q ss_pred             HhC--CCCCcEEEEcCChhhHHHHHHH
Q 025117          188 KFG--IQKSQICMVGDRLDTDILFGQN  212 (257)
Q Consensus       188 ~~~--~~~~~~~~IGD~~~~Di~~A~~  212 (257)
                      ++|  ++|++|+||||+ ..|+...++
T Consensus       101 ~lg~~~~p~~~l~igDs-~~n~~~~~~  126 (128)
T TIGR01681       101 KLNGVLKPKSILFVDDR-PDNNEEVDY  126 (128)
T ss_pred             HhcCCCCcceEEEECCC-HhHHHHHHh
Confidence            999  999999999999 588876553

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=98.60  E-value=2.9e-08  Score=82.31  Aligned_cols=128  Identities=9%  Similarity=-0.065  Sum_probs=81.9

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHH---hccCCCccccCCCcHHH----------H
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFV---GSTQREPLVVGKPSTFM----------M  182 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~---~~~~~~~~~~gKP~p~~----------~  182 (257)
                      ..++.+.+.++.+++++-..+|+||+...+. ...+... +..  ..+.   .....+.....||+|..          .
T Consensus        74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i-~~il~~~-~~~--~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K  149 (219)
T PRK09552         74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFV-YPLLQGL-IPK--EQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK  149 (219)
T ss_pred             CcCcCHHHHHHHHHHcCCeEEEECCCcHHHH-HHHHHHh-CCc--CcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence            3567788888888874445778899876442 2122211 111  1111   01122334567898865          3


Q ss_pred             HHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          183 DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       183 ~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      ..++++++..+++|+||||+ .+|+.+|++||+..  +. +.- .+...+   ...|.+.++++.|+.+.+..
T Consensus       150 ~~~l~~~~~~~~~~i~iGDs-~~Di~aa~~Ag~~~--a~-~~l-~~~~~~---~~~~~~~~~~f~ei~~~l~~  214 (219)
T PRK09552        150 PSLIRKLSDTNDFHIVIGDS-ITDLEAAKQADKVF--AR-DFL-ITKCEE---LGIPYTPFETFHDVQTELKH  214 (219)
T ss_pred             HHHHHHhccCCCCEEEEeCC-HHHHHHHHHCCcce--eH-HHH-HHHHHH---cCCCccccCCHHHHHHHHHH
Confidence            47888899999999999999 69999999999933  33 211 111111   13588889999999888764

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=98.58  E-value=7.3e-08  Score=78.83  Aligned_cols=127  Identities=9%  Similarity=-0.052  Sum_probs=77.9

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCC-ccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQRE-PLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      .|+.+.+.+..+++. ....|+||+...+. ...+...++..++.......+.. .....+|.|.....++++++..+++
T Consensus        69 ~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~-~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~~  146 (205)
T PRK13582         69 PLPGAVEFLDWLRER-FQVVILSDTFYEFA-GPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGYR  146 (205)
T ss_pred             CCCCHHHHHHHHHhc-CCEEEEeCCcHHHH-HHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCCe
Confidence            466778888888875 56778899877543 22334455554443221111111 0111123333445666677777899


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcE-EECChhhHHHHHHh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDF-YTNKISDFLSLKAA  255 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~-~~~~l~el~~~l~~  255 (257)
                      |+||||+ .+|+.+|+++|+. +++  +. +.....     ..|++ +++++.||.+++..
T Consensus       147 ~v~iGDs-~~D~~~~~aa~~~-v~~--~~-~~~~~~-----~~~~~~~~~~~~el~~~l~~  197 (205)
T PRK13582        147 VIAAGDS-YNDTTMLGEADAG-ILF--RP-PANVIA-----EFPQFPAVHTYDELLAAIDK  197 (205)
T ss_pred             EEEEeCC-HHHHHHHHhCCCC-EEE--CC-CHHHHH-----hCCcccccCCHHHHHHHHHH
Confidence            9999999 6999999999973 333  22 222221     24665 89999999987754

>PTZ00445 p36-lilke protein; Provisional

Probab=98.51  E-value=9.3e-07  Score=71.68  Aligned_cols=51  Identities=16%  Similarity=0.238  Sum_probs=47.3

Q ss_pred             cccCCCcHHH--H--HHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccC
Q 025117          172 LVVGKPSTFM--M--DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG  223 (257)
Q Consensus       172 ~~~gKP~p~~--~--~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G  223 (257)
                      ..+.||+|.+  |  +.+++++|++|++|++|.|+ ...+++|++.|+.++.+..+
T Consensus       153 ~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~-~~NVeaA~~lGi~ai~f~~~  207 (219)
T PTZ00445        153 LGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDD-MNNCKNALKEGYIALHVTGN  207 (219)
T ss_pred             hcccCCCccchHHHHHHHHHHcCCCHHHeEeecCC-HHHHHHHHHCCCEEEEcCCh
Confidence            4668999999  9  99999999999999999999 69999999999999999854

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=98.49  E-value=1.3e-08  Score=79.22  Aligned_cols=91  Identities=12%  Similarity=-0.116  Sum_probs=66.6

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCc-hHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGG-SMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g-~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      .++.+.+.+..|++ .-.+.|+||+...+.. ..+...+.. .|++.+.+   .+....+||+   |..++++++.+|++
T Consensus        46 l~pG~~e~L~~L~~-~~~l~I~Ts~~~~~~~-~il~~l~~~~~~f~~i~~---~~d~~~~KP~---~~k~l~~l~~~p~~  117 (148)
T smart00577       46 KRPGVDEFLKRASE-LFELVVFTAGLRMYAD-PVLDLLDPKKYFGYRRLF---RDECVFVKGK---YVKDLSLLGRDLSN  117 (148)
T ss_pred             ECCCHHHHHHHHHh-ccEEEEEeCCcHHHHH-HHHHHhCcCCCEeeeEEE---CccccccCCe---EeecHHHcCCChhc
Confidence            46778888988874 3457889999886532 233444442 24454443   3344458997   88999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCe
Q 025117          196 ICMVGDRLDTDILFGQNGGCK  216 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~  216 (257)
                      |+||||+ ..|+++|+++|+.
T Consensus       118 ~i~i~Ds-~~~~~aa~~ngI~  137 (148)
T smart00577      118 VIIIDDS-PDSWPFHPENLIP  137 (148)
T ss_pred             EEEEECC-HHHhhcCccCEEE
Confidence            9999999 5999999999875

>TIGR01686 FkbH FkbH-like domain

Probab=98.48  E-value=2.7e-07  Score=81.02  Aligned_cols=90  Identities=11%  Similarity=-0.044  Sum_probs=66.5

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCccc----ccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEW----AGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ  192 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~----~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~  192 (257)
                      .|+.+++.+..|++.+-.+.||||++..... ..+..    .+...+|+.+.   .     ..||+|..+..+++++++.
T Consensus        32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~-~~l~~~~~~~~~~~~f~~~~---~-----~~~pk~~~i~~~~~~l~i~  102 (320)
T TIGR01686        32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAK-KVFERRKDFILQAEDFDARS---I-----NWGPKSESLRKIAKKLNLG  102 (320)
T ss_pred             cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHH-HHHHhCccccCcHHHeeEEE---E-----ecCchHHHHHHHHHHhCCC
Confidence            4889999999998743346789999875422 12222    34433443321   1     1699999999999999999


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCe
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCK  216 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~  216 (257)
                      +++++||||+ ..|+.++++++-.
T Consensus       103 ~~~~vfidD~-~~d~~~~~~~lp~  125 (320)
T TIGR01686       103 TDSFLFIDDN-PAERANVKITLPV  125 (320)
T ss_pred             cCcEEEECCC-HHHHHHHHHHCCC
Confidence            9999999999 5999999997754

The C-terminal portion of this domain is unique to this family (by BLAST).

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=98.44  E-value=2e-06  Score=65.61  Aligned_cols=119  Identities=22%  Similarity=0.212  Sum_probs=77.6

Q ss_pred             CccEEEEeccCCCCH-------HHHHHHHHHHHc-CC-CceEEEecCCCccccCCCcccccCchHHHHHHhccCCCc--c
Q 025117          104 DVGAVVVGFDRYFNY-------YKVQYGTLCIRE-NP-GCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP--L  172 (257)
Q Consensus       104 ~~~aVv~~~d~~~~~-------~~~~~~~~~l~~-~~-~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~--~  172 (257)
                      .+.|||+..|..+++       +....-.+.++. ++ .-++++||.-...      ..-.-++....++...|..+  .
T Consensus        42 ~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~------~~D~d~s~Ak~le~k~gIpVlRH  115 (190)
T KOG2961|consen   42 GIKAVVLDKDNCITAPYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLT------EYDHDDSKAKALEAKIGIPVLRH  115 (190)
T ss_pred             CceEEEEcCCCeeeCCcccccCchhHHHHHHHHHHhCcccEEEEecCcCcc------ccCCchHHHHHHHHhhCCceEee
Confidence            678888888766433       222223333332 22 3467778864421      22334667788888777765  3


Q ss_pred             ccCCCc--HHHHHHHHHHhC-CCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChh
Q 025117          173 VVGKPS--TFMMDYLANKFG-IQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS  228 (257)
Q Consensus       173 ~~gKP~--p~~~~~~~~~~~-~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~  228 (257)
                      ...||-  .+.+++....-. ..+++++||||++.|||..|+.+|.-++|...|....+
T Consensus       116 s~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~~  174 (190)
T KOG2961|consen  116 SVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAEE  174 (190)
T ss_pred             cccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccccccc
Confidence            445663  445555432111 57899999999999999999999999999999987544

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=98.40  E-value=4.4e-06  Score=73.23  Aligned_cols=128  Identities=13%  Similarity=0.025  Sum_probs=82.0

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHH-HHHhc----cCC--CccccCCCcHHHHHHHHHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG-AFVGS----TQR--EPLVVGKPSTFMMDYLANK  188 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~-~i~~~----~~~--~~~~~gKP~p~~~~~~~~~  188 (257)
                      ..++.+.+.++.+++.+-...|+|+....+. .......++...+. .++..    ++.  .....+||+++.++.++++
T Consensus       181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~-~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~  259 (322)
T PRK11133        181 PLMPGLTELVLKLQALGWKVAIASGGFTYFA-DYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQE  259 (322)
T ss_pred             CCChhHHHHHHHHHHcCCEEEEEECCcchhH-HHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHH
Confidence            3567778888888874444778888765332 11112222211100 00000    010  1233479999999999999


Q ss_pred             hCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEEC--ChhhHHHHHHh
Q 025117          189 FGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN--KISDFLSLKAA  255 (257)
Q Consensus       189 ~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~--~l~el~~~l~~  255 (257)
                      +|+++++|++|||+ .+|+.+++.||+..++     +..+.+.     ..++++++  +|..++-++.+
T Consensus       260 lgi~~~qtIaVGDg-~NDl~m~~~AGlgiA~-----nAkp~Vk-----~~Ad~~i~~~~l~~~l~~~~~  317 (322)
T PRK11133        260 YEIPLAQTVAIGDG-ANDLPMIKAAGLGIAY-----HAKPKVN-----EQAQVTIRHADLMGVLCILSG  317 (322)
T ss_pred             cCCChhhEEEEECC-HHHHHHHHHCCCeEEe-----CCCHHHH-----hhCCEEecCcCHHHHHHHhcc
Confidence            99999999999999 5999999999987664     2233443     36788876  67777766654

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=98.39  E-value=1.2e-07  Score=77.06  Aligned_cols=107  Identities=10%  Similarity=-0.050  Sum_probs=66.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCC-----cc--ccCCCcHHHHHHHHHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQRE-----PL--VVGKPSTFMMDYLANK  188 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~-----~~--~~gKP~p~~~~~~~~~  188 (257)
                      ..|+.+.+.+..+++.+..++|+||...... ...+...|+..++..........     ..  .-.+|++..+..++++
T Consensus        80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~-~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~  158 (201)
T TIGR01491        80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLA-KKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRE  158 (201)
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEeCCcHHHH-HHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHH
Confidence            3567788889999874445788898866432 21222333322221111110000     00  0013334688888999


Q ss_pred             hCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          189 FGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       189 ~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      +++++++++||||+ .+|+.+|+++|+..+....+.
T Consensus       159 ~~~~~~~~i~iGDs-~~D~~~a~~ag~~~a~~~~~~  193 (201)
T TIGR01491       159 LNPSLTETVAVGDS-KNDLPMFEVADISISLGDEGH  193 (201)
T ss_pred             hCCCHHHEEEEcCC-HhHHHHHHhcCCeEEECCCcc
Confidence            99999999999999 699999999999766555443

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=98.37  E-value=2.1e-07  Score=76.93  Aligned_cols=128  Identities=10%  Similarity=-0.082  Sum_probs=80.2

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHh---ccCCCccccCCCcHHHH----------
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVG---STQREPLVVGKPSTFMM----------  182 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~---~~~~~~~~~gKP~p~~~----------  182 (257)
                      ..++.+.+.+..+++++..+.|+|++...+. ...+...+.   ...+..   ..+.+.....||+|..+          
T Consensus        70 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i-~~il~~~~~---~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K  145 (214)
T TIGR03333        70 EIREGFREFVAFINEHGIPFYVISGGMDFFV-YPLLEGIVE---KDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK  145 (214)
T ss_pred             cccccHHHHHHHHHHCCCeEEEECCCcHHHH-HHHHHhhCC---cccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence            4556778888888875445778888866432 111111111   112211   11223345678988776          


Q ss_pred             HHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          183 DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       183 ~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      ..++++++..+++++||||+ .+|+.+|+.||+  +++.. . -.....+   ...|...++++.|+.++|+.
T Consensus       146 ~~~l~~~~~~~~~~i~iGDg-~~D~~~a~~Ad~--~~ar~-~-l~~~~~~---~~~~~~~~~~f~di~~~l~~  210 (214)
T TIGR03333       146 PSLIRKLSEPNDYHIVIGDS-VTDVEAAKQSDL--CFARD-Y-LLNECEE---LGLNHAPFQDFYDVRKELEN  210 (214)
T ss_pred             HHHHHHHhhcCCcEEEEeCC-HHHHHHHHhCCe--eEehH-H-HHHHHHH---cCCCccCcCCHHHHHHHHHH
Confidence            36777777788999999999 799999999998  55543 1 1111111   13467778999999888764

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=98.35  E-value=2.5e-07  Score=81.23  Aligned_cols=105  Identities=15%  Similarity=0.159  Sum_probs=69.2

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccc-c-------CchHHHHHHhccCCCcccc--------------
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWA-G-------GGSMVGAFVGSTQREPLVV--------------  174 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~-~-------~g~~~~~i~~~~~~~~~~~--------------  174 (257)
                      .++.+.+.+..|++.+..++|+||++..+.. ..+... |       +..+|+.+.+... +|.++              
T Consensus       185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~-~im~~l~g~~~~~~~w~~yFD~IIt~a~-KP~FF~~~~pf~~v~~~~g  262 (343)
T TIGR02244       185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTD-KGMKYLLGPFLGEHDWRDYFDVVIVDAR-KPGFFTEGRPFRQVDVETG  262 (343)
T ss_pred             cchhHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHhhCCcccccchHhhCcEEEeCCC-CCcccCCCCceEEEeCCCC
Confidence            4677888888888754458899999886532 222332 3       3455554443221 11000              


Q ss_pred             -CCCcH-------HH-----HHHHHHHhCCCCCcEEEEcCChhhHHHHHH-HcCCeEEEEccC
Q 025117          175 -GKPST-------FM-----MDYLANKFGIQKSQICMVGDRLDTDILFGQ-NGGCKTLLVLSG  223 (257)
Q Consensus       175 -gKP~p-------~~-----~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~-~aG~~ti~V~~G  223 (257)
                       .|+..       .+     +....+.+++++++++||||++.+||.+|+ .+||+|++|..-
T Consensus       263 ~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE  325 (343)
T TIGR02244       263 SLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE  325 (343)
T ss_pred             cccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence             11111       11     345667789999999999999999999998 999999999863

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=98.20  E-value=9.3e-07  Score=81.91  Aligned_cols=93  Identities=19%  Similarity=0.119  Sum_probs=62.6

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCcccc-----------CCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHH
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHL-----------TDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYL  185 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~-----------~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~  185 (257)
                      .|+.+.+.+..|++.+-.++|+||+.....-           ...+...|+  .++.+   .+.....++||+|.|+.++
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi--pfdvi---ia~~~~~~RKP~pGm~~~a  272 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV--PFQVF---IAIGAGFYRKPLTGMWDHL  272 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC--ceEEE---EeCCCCCCCCCCHHHHHHH
Confidence            4788899999998754557889998773210           000111111  12211   1222345689999999999


Q ss_pred             HHHhC----CCCCcEEEEcCChhhHHHHHHHcCC
Q 025117          186 ANKFG----IQKSQICMVGDRLDTDILFGQNGGC  215 (257)
Q Consensus       186 ~~~~~----~~~~~~~~IGD~~~~Di~~A~~aG~  215 (257)
                      +++++    +++++++||||+ ..|++.|+++|-
T Consensus       273 ~~~~~~~~~Id~~~S~~VGDa-agr~~~g~~ag~  305 (526)
T TIGR01663       273 KEEANDGTEIQEDDCFFVGDA-AGRPANGKAAGK  305 (526)
T ss_pred             HHhcCcccCCCHHHeEEeCCc-ccchHHHHhcCC
Confidence            99984    899999999999 688777776664

Note that the EC number for the kinase function is: 2.7.1.78

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=98.20  E-value=4.8e-07  Score=74.06  Aligned_cols=89  Identities=17%  Similarity=0.189  Sum_probs=60.6

Q ss_pred             CCCHHHHHHHHHHHHcCCCc-eEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCC
Q 025117          115 YFNYYKVQYGTLCIRENPGC-LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK  193 (257)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~  193 (257)
                      ...++++..++..|++ .|+ ..++|+..... ........|+..   .+  ... . . .+||++.+|..+++.++.++
T Consensus       126 d~~~~~~~~~l~~L~~-~Gi~~~i~TGD~~~~-a~~~~~~lgi~~---~~--v~a-~-~-~~kP~~k~~~~~i~~l~~~~  195 (215)
T PF00702_consen  126 DPLRPGAKEALQELKE-AGIKVAILTGDNEST-ASAIAKQLGIFD---SI--VFA-R-V-IGKPEPKIFLRIIKELQVKP  195 (215)
T ss_dssp             EEBHTTHHHHHHHHHH-TTEEEEEEESSEHHH-HHHHHHHTTSCS---EE--EEE-S-H-ETTTHHHHHHHHHHHHTCTG
T ss_pred             Ccchhhhhhhhhhhhc-cCcceeeeecccccc-cccccccccccc---cc--ccc-c-c-cccccchhHHHHHHHHhcCC
Confidence            3567889999999987 465 66667543322 111112223200   00  000 0 0 16999999999999999999


Q ss_pred             CcEEEEcCChhhHHHHHHHcC
Q 025117          194 SQICMVGDRLDTDILFGQNGG  214 (257)
Q Consensus       194 ~~~~~IGD~~~~Di~~A~~aG  214 (257)
                      ++|+||||.+ +|+.++++||
T Consensus       196 ~~v~~vGDg~-nD~~al~~Ag  215 (215)
T PF00702_consen  196 GEVAMVGDGV-NDAPALKAAG  215 (215)
T ss_dssp             GGEEEEESSG-GHHHHHHHSS
T ss_pred             CEEEEEccCH-HHHHHHHhCc
Confidence            9999999995 9999999997

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=98.04  E-value=7.5e-06  Score=64.50  Aligned_cols=98  Identities=17%  Similarity=0.090  Sum_probs=59.5

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHH---hccCC--------CccccCCCcHHHHHHH
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFV---GSTQR--------EPLVVGKPSTFMMDYL  185 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~---~~~~~--------~~~~~gKP~p~~~~~~  185 (257)
                      -++.+.++++.+.+.+..++|+||.......   ........+...+.   ...+.        ..-.++||.+-|++.+
T Consensus        30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~---~~~~~~~~~~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~  106 (159)
T PF08645_consen   30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRG---MGEKDLENFHEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFA  106 (159)
T ss_dssp             C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCT---BTCCHHHHHHHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHH
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCccccccc---cccchHHHHHHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHH
Confidence            3445788888887755558888999875421   01111122222221   11111        1125899999999999


Q ss_pred             HHHhC----CCCCcEEEEcCC----------hhhHHHHHHHcCCeE
Q 025117          186 ANKFG----IQKSQICMVGDR----------LDTDILFGQNGGCKT  217 (257)
Q Consensus       186 ~~~~~----~~~~~~~~IGD~----------~~~Di~~A~~aG~~t  217 (257)
                      ++.+.    ++.++++||||.          -.+|...|.++|++.
T Consensus       107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f  152 (159)
T PF08645_consen  107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF  152 (159)
T ss_dssp             CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred             HHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence            99886    488999999994          258999999999974

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.93  E-value=4.7e-06  Score=66.86  Aligned_cols=95  Identities=12%  Similarity=-0.007  Sum_probs=59.8

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccC-----------------CCccccCCCcH
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQ-----------------REPLVVGKPST  179 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~-----------------~~~~~~gKP~p  179 (257)
                      .++.+.+.+..+++.+...+|+||...... ...+...++..+|+.+.+...                 ......|.+++
T Consensus        73 l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~-~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K~  151 (188)
T TIGR01489        73 IDPGFKEFIAFIKEHGIDFIVISDGNDFFI-DPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCKG  151 (188)
T ss_pred             CCccHHHHHHHHHHcCCcEEEEeCCcHHHH-HHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCHH
Confidence            344567777788764445778888765432 222334455555544443211                 01123455568


Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCe
Q 025117          180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK  216 (257)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~  216 (257)
                      .+++.+++..   +++++||||+ .+|+.+|+++++-
T Consensus       152 ~~~~~~~~~~---~~~~i~iGD~-~~D~~aa~~~d~~  184 (188)
T TIGR01489       152 KVIHKLSEPK---YQHIIYIGDG-VTDVCPAKLSDVV  184 (188)
T ss_pred             HHHHHHHhhc---CceEEEECCC-cchhchHhcCCcc
Confidence            8888887664   7899999999 6999999998653

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=97.81  E-value=7.5e-05  Score=70.13  Aligned_cols=116  Identities=9%  Similarity=-0.013  Sum_probs=76.6

Q ss_pred             CCCHHHHHHHHHHHHcCCC-ceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCC
Q 025117          115 YFNYYKVQYGTLCIRENPG-CLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK  193 (257)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~~-~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~  193 (257)
                      ...+++..++++.|++.+- ...++||.+.... .......|+..++..+            .|.+.  ..++++++...
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a-~~i~~~lgi~~~f~~~------------~p~~K--~~~i~~l~~~~  425 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVA-ERVARELGIDEVHAEL------------LPEDK--LEIVKELREKY  425 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHH-HHHHHHcCChhhhhcc------------CcHHH--HHHHHHHHhcC
Confidence            3578999999999987433 4678888766442 2233445554433211            12221  23555555566


Q ss_pred             CcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEE--CChhhHHHHHH
Q 025117          194 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKA  254 (257)
Q Consensus       194 ~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~--~~l~el~~~l~  254 (257)
                      ++++||||+ ..|+.++++||+   .|.+|....+...     ..+|+++  +++.+|.+++.
T Consensus       426 ~~v~~vGDg-~nD~~al~~A~v---gia~g~~~~~~~~-----~~ad~vl~~~~l~~l~~~i~  479 (536)
T TIGR01512       426 GPVAMVGDG-INDAPALAAADV---GIAMGASGSDVAI-----ETADVVLLNDDLSRLPQAIR  479 (536)
T ss_pred             CEEEEEeCC-HHHHHHHHhCCE---EEEeCCCccHHHH-----HhCCEEEECCCHHHHHHHHH
Confidence            899999999 699999999994   6777743322222     3689998  89999987765

.

>TIGR00685 T6PP trehalose-phosphatase

Probab=97.75  E-value=9e-05  Score=62.51  Aligned_cols=73  Identities=18%  Similarity=0.005  Sum_probs=60.7

Q ss_pred             ccCCCcH----HHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHc-------CCeEEEEccCCCChhhhcCCCCCCCCcE
Q 025117          173 VVGKPST----FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG-------GCKTLLVLSGVTSLSMLQSPNNSIQPDF  241 (257)
Q Consensus       173 ~~gKP~p----~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~a-------G~~ti~V~~G~~~~~~~~~~~~~~~pd~  241 (257)
                      ...||..    ..++.++++++..+.+++||||+ .+|+.+.+.+       |..++.|.+|..          ...++|
T Consensus       159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~-~~D~~~~~~~~~~~~~~g~~~v~v~~g~~----------~~~A~~  227 (244)
T TIGR00685       159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDD-ITDEDAFRVVNNQWGNYGFYPVPIGSGSK----------KTVAKF  227 (244)
T ss_pred             EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCC-CcHHHHHHHHhcccCCCCeEEEEEecCCc----------CCCceE
Confidence            3456764    88999999999999999999999 6999999998       778888875521          146899


Q ss_pred             EECChhhHHHHHHhh
Q 025117          242 YTNKISDFLSLKAAA  256 (257)
Q Consensus       242 ~~~~l~el~~~l~~~  256 (257)
                      ++++..++.++|+.+
T Consensus       228 ~~~~~~~v~~~L~~l  242 (244)
T TIGR00685       228 HLTGPQQVLEFLGLL  242 (244)
T ss_pred             eCCCHHHHHHHHHHH
Confidence            999999999988764

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=97.72  E-value=5.4e-05  Score=71.44  Aligned_cols=115  Identities=10%  Similarity=0.028  Sum_probs=74.3

Q ss_pred             CCCHHHHHHHHHHHHcCC-CceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCC
Q 025117          115 YFNYYKVQYGTLCIRENP-GCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK  193 (257)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~-~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~  193 (257)
                      ...|+++.++++.|++.+ -...++||...... .......|+..++..+          ..++++.    ++++++..+
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a-~~i~~~lgi~~~f~~~----------~p~~K~~----~v~~l~~~~  447 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAA-EAVAAELGIDEVHAEL----------LPEDKLA----IVKELQEEG  447 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHH-HHHHHHhCCCeeeccC----------CHHHHHH----HHHHHHHcC
Confidence            457899999999998744 34778898766432 2222344443332211          0122233    444454467


Q ss_pred             CcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEEC--ChhhHHHHHH
Q 025117          194 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN--KISDFLSLKA  254 (257)
Q Consensus       194 ~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~--~l~el~~~l~  254 (257)
                      ++++||||+ ..|+.++++||   +.|.+|... +...     ..+|+++.  ++..+.+++.
T Consensus       448 ~~v~~vGDg-~nD~~al~~A~---vgia~g~~~-~~~~-----~~Ad~vi~~~~~~~l~~~i~  500 (556)
T TIGR01525       448 GVVAMVGDG-INDAPALAAAD---VGIAMGAGS-DVAI-----EAADIVLLNDDLSSLPTAID  500 (556)
T ss_pred             CEEEEEECC-hhHHHHHhhCC---EeEEeCCCC-HHHH-----HhCCEEEeCCCHHHHHHHHH
Confidence            799999999 69999999999   677777322 2222     36899887  7888877654

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=97.71  E-value=2.7e-05  Score=63.37  Aligned_cols=100  Identities=11%  Similarity=0.041  Sum_probs=65.9

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHH-HHh-c----cCC--CccccCCCcHHHHHHHHHH
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA-FVG-S----TQR--EPLVVGKPSTFMMDYLANK  188 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~-i~~-~----~~~--~~~~~gKP~p~~~~~~~~~  188 (257)
                      .++.+.+.++.+++.+...+|+||....+. .......|+..++.. +.. .    +|.  .+...|+++...++..+++
T Consensus        88 ~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v-~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~  166 (202)
T TIGR01490        88 LYPEARDLIRWHKAEGHTIVLVSASLTILV-KPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLAE  166 (202)
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEeCCcHHHH-HHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHHH
Confidence            466777888888764445778888876442 212233343333221 211 1    111  1123467778889999999


Q ss_pred             hCCCCCcEEEEcCChhhHHHHHHHcCCeEE
Q 025117          189 FGIQKSQICMVGDRLDTDILFGQNGGCKTL  218 (257)
Q Consensus       189 ~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti  218 (257)
                      .+++++++++|||+ .+|+.+++.+|...+
T Consensus       167 ~~~~~~~~~~~gDs-~~D~~~~~~a~~~~~  195 (202)
T TIGR01490       167 EQIDLKDSYAYGDS-ISDLPLLSLVGHPYV  195 (202)
T ss_pred             cCCCHHHcEeeeCC-cccHHHHHhCCCcEE
Confidence            99999999999999 599999999996654

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=97.49  E-value=0.00028  Score=57.88  Aligned_cols=124  Identities=10%  Similarity=-0.056  Sum_probs=76.4

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHH-HHhcc-CC--CccccCCCcHHHHHHHHHHhCCC
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA-FVGST-QR--EPLVVGKPSTFMMDYLANKFGIQ  192 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~-i~~~~-~~--~~~~~gKP~p~~~~~~~~~~~~~  192 (257)
                      .++...+.+..++++ +..+|+|++...+. .......|+..++.. +.... |.  ......||.+......+++.+  
T Consensus        69 l~pga~ell~~lk~~-~~~~IVS~~~~~~~-~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~--  144 (203)
T TIGR02137        69 PLEGAVEFVDWLRER-FQVVILSDTFYEFS-QPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY--  144 (203)
T ss_pred             CCccHHHHHHHHHhC-CeEEEEeCChHHHH-HHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC--
Confidence            466778888888874 67888898877543 223345555544321 11111 11  111235666666655556555  


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcE-EECChhhHHHHHHh
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDF-YTNKISDFLSLKAA  255 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~-~~~~l~el~~~l~~  255 (257)
                       .+++||||+ .+|+.+++.+|+..++-..     +.+.+    ..|++ ++.+.+||.+.+.-
T Consensus       145 -~~~v~vGDs-~nDl~ml~~Ag~~ia~~ak-----~~~~~----~~~~~~~~~~~~~~~~~~~~  197 (203)
T TIGR02137       145 -YRVIAAGDS-YNDTTMLSEAHAGILFHAP-----ENVIR----EFPQFPAVHTYEDLKREFLK  197 (203)
T ss_pred             -CCEEEEeCC-HHHHHHHHhCCCCEEecCC-----HHHHH----hCCCCCcccCHHHHHHHHHH
Confidence             379999999 6999999999988765442     22221    23444 56788998877653

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=97.35  E-value=0.00045  Score=58.83  Aligned_cols=68  Identities=13%  Similarity=0.110  Sum_probs=50.5

Q ss_pred             CcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHHHH
Q 025117          177 PSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSLKA  254 (257)
Q Consensus       177 P~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~l~  254 (257)
                      .++..++.+++.+|++++++++|||+ ..|+.+++.+|+   .|..|.. .+++.     ..+++++++-.+  +.+.|+
T Consensus       199 ~K~~~l~~l~~~~gi~~~e~i~~GD~-~NDi~m~~~ag~---~vamgna-~~~lk-----~~Ad~v~~~n~~dGv~~~l~  268 (272)
T PRK10530        199 SKGKRLTQWVEAQGWSMKNVVAFGDN-FNDISMLEAAGL---GVAMGNA-DDAVK-----ARADLVIGDNTTPSIAEFIY  268 (272)
T ss_pred             ChHHHHHHHHHHcCCCHHHeEEeCCC-hhhHHHHHhcCc---eEEecCc-hHHHH-----HhCCEEEecCCCCcHHHHHH
Confidence            34578899999999999999999999 799999999996   3444543 34454     368888866443  444443

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=97.32  E-value=0.00015  Score=57.48  Aligned_cols=94  Identities=14%  Similarity=-0.019  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhc------cCC---CccccCCCcHHHHHHHHHH
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGS------TQR---EPLVVGKPSTFMMDYLANK  188 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~------~~~---~~~~~gKP~p~~~~~~~~~  188 (257)
                      ++.+.+.+..+++.+....|+|+....+. .......|+..++......      ++.   +....+..++..++..+++
T Consensus        75 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~i-~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~~~  153 (177)
T TIGR01488        75 RPGARELISWLKERGIDTVIVSGGFDFFV-EPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLEE  153 (177)
T ss_pred             CcCHHHHHHHHHHCCCEEEEECCCcHHHH-HHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHHHH
Confidence            45667777778764445677788766432 2222333443332211111      110   0112344456788888888


Q ss_pred             hCCCCCcEEEEcCChhhHHHHHHHc
Q 025117          189 FGIQKSQICMVGDRLDTDILFGQNG  213 (257)
Q Consensus       189 ~~~~~~~~~~IGD~~~~Di~~A~~a  213 (257)
                      ++++++++++|||+ .+|+.+++.+
T Consensus       154 ~~~~~~~~~~iGDs-~~D~~~~~~a  177 (177)
T TIGR01488       154 SKITLKKIIAVGDS-VNDLPMLKLA  177 (177)
T ss_pred             hCCCHHHEEEEeCC-HHHHHHHhcC
Confidence            89999999999999 6999998764

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=97.28  E-value=0.0027  Score=60.09  Aligned_cols=113  Identities=11%  Similarity=0.025  Sum_probs=70.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..+++..++++.|++.+-...++||...... .......|+. ++      ...    ..++++.++    ++++.++++
T Consensus       405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a-~~ia~~lgi~-~~------~~~----~p~~K~~~v----~~l~~~~~~  468 (562)
T TIGR01511       405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTA-KAVAKELGIN-VR------AEV----LPDDKAALI----KELQEKGRV  468 (562)
T ss_pred             cccHHHHHHHHHHHHcCCeEEEEcCCCHHHH-HHHHHHcCCc-EE------ccC----ChHHHHHHH----HHHHHcCCE
Confidence            4678889999999874334667788766432 2222333432 11      011    122333433    344446789


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEE--CChhhHHHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKA  254 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~--~~l~el~~~l~  254 (257)
                      ++||||+ ..|+.+++++|+   .|.+|....  ...    ..+|+++  +++.+|.+++.
T Consensus       469 v~~VGDg-~nD~~al~~A~v---gia~g~g~~--~a~----~~Advvl~~~~l~~l~~~i~  519 (562)
T TIGR01511       469 VAMVGDG-INDAPALAQADV---GIAIGAGTD--VAI----EAADVVLMRNDLNDVATAID  519 (562)
T ss_pred             EEEEeCC-CccHHHHhhCCE---EEEeCCcCH--HHH----hhCCEEEeCCCHHHHHHHHH
Confidence            9999999 599999999995   456664332  221    3689988  58888887664

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=97.05  E-value=0.00036  Score=59.65  Aligned_cols=93  Identities=14%  Similarity=0.055  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHh---ccCCCccccCCCcH---------HHHHHHH
Q 025117          119 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVG---STQREPLVVGKPST---------FMMDYLA  186 (257)
Q Consensus       119 ~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~---~~~~~~~~~gKP~p---------~~~~~~~  186 (257)
                      +...+.+..|++++-..+|+|+.-... ....+...++...+..+.+   ....+-...|||.|         .+++.+.
T Consensus       124 pG~~efl~~L~~~GIpv~IvS~G~~~~-Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~~~  202 (277)
T TIGR01544       124 DGYENFFDKLQQHSIPVFIFSAGIGNV-LEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALRNT  202 (277)
T ss_pred             cCHHHHHHHHHHCCCcEEEEeCCcHHH-HHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHHHH
Confidence            345566777766433467777765532 1112222232111111100   01111234478888         7777788


Q ss_pred             HHhC--CCCCcEEEEcCChhhHHHHHHHc
Q 025117          187 NKFG--IQKSQICMVGDRLDTDILFGQNG  213 (257)
Q Consensus       187 ~~~~--~~~~~~~~IGD~~~~Di~~A~~a  213 (257)
                      +.++  .++++|++|||+ .+|+.+|.-.
T Consensus       203 ~~~~~~~~~~~vI~vGDs-~~Dl~ma~g~  230 (277)
T TIGR01544       203 EYFNQLKDRSNIILLGDS-QGDLRMADGV  230 (277)
T ss_pred             HHhCccCCcceEEEECcC-hhhhhHhcCC
Confidence            8888  789999999999 5999998744

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PRK08238 hypothetical protein; Validated

Probab=96.83  E-value=0.0015  Score=60.39  Aligned_cols=96  Identities=16%  Similarity=0.072  Sum_probs=62.1

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEE
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC  197 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  197 (257)
                      ++++.+.++.+++.+....|+||++.... .....+.|+   |+.+....+..   ..||++.. +.+.+.++  .++++
T Consensus        74 ~pga~e~L~~lk~~G~~v~LaTas~~~~a-~~i~~~lGl---Fd~Vigsd~~~---~~kg~~K~-~~l~~~l~--~~~~~  143 (479)
T PRK08238         74 NEEVLDYLRAERAAGRKLVLATASDERLA-QAVAAHLGL---FDGVFASDGTT---NLKGAAKA-AALVEAFG--ERGFD  143 (479)
T ss_pred             ChhHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHHHcCC---CCEEEeCCCcc---ccCCchHH-HHHHHHhC--ccCee
Confidence            36677888888775455788999888553 222233333   34443333322   35665543 23445554  35689


Q ss_pred             EEcCChhhHHHHHHHcCCeEEEEccCCC
Q 025117          198 MVGDRLDTDILFGQNGGCKTLLVLSGVT  225 (257)
Q Consensus       198 ~IGD~~~~Di~~A~~aG~~ti~V~~G~~  225 (257)
                      |+||+ ..|+..++.+| +.+.|..+..
T Consensus       144 yvGDS-~~Dlp~~~~A~-~av~Vn~~~~  169 (479)
T PRK08238        144 YAGNS-AADLPVWAAAR-RAIVVGASPG  169 (479)
T ss_pred             EecCC-HHHHHHHHhCC-CeEEECCCHH
Confidence            99999 69999999999 8889987654

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=96.74  E-value=0.0011  Score=55.77  Aligned_cols=91  Identities=13%  Similarity=0.094  Sum_probs=56.9

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCcccc-CCCcccccCch-HHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHL-TDAQEWAGGGS-MVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK  193 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~-~~~~~~~~~g~-~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~  193 (257)
                      -.|+...++++.|++.+....++||+.+.... ...+...|+.. .++.+.++....        ...+..++++++.++
T Consensus        24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~--------~~~l~~~~~~~~~~~   95 (242)
T TIGR01459        24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA--------VQMILESKKRFDIRN   95 (242)
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH--------HHHHHhhhhhccCCC
Confidence            45888999999998754457788998663211 01223344443 344443321110        145666677788889


Q ss_pred             CcEEEEcCChhhHHHHHHHcCC
Q 025117          194 SQICMVGDRLDTDILFGQNGGC  215 (257)
Q Consensus       194 ~~~~~IGD~~~~Di~~A~~aG~  215 (257)
                      ++++||||+ ..|+..-..+|.
T Consensus        96 ~~~~~vGd~-~~d~~~~~~~~~  116 (242)
T TIGR01459        96 GIIYLLGHL-ENDIINLMQCYT  116 (242)
T ss_pred             ceEEEeCCc-ccchhhhcCCCc
Confidence            999999999 578876654443

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK10671 copA copper exporting ATPase; Provisional

Probab=96.71  E-value=0.0065  Score=60.23  Aligned_cols=115  Identities=14%  Similarity=0.036  Sum_probs=72.6

Q ss_pred             CCHHHHHHHHHHHHcCCCc-eEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCC
Q 025117          116 FNYYKVQYGTLCIRENPGC-LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~  194 (257)
                      ..+++..+++..|++ .|+ ..++|+..... ........|+..++              ..-.|+--..++++++..++
T Consensus       650 ~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~-a~~ia~~lgi~~~~--------------~~~~p~~K~~~i~~l~~~~~  713 (834)
T PRK10671        650 PLRSDSVAALQRLHK-AGYRLVMLTGDNPTT-ANAIAKEAGIDEVI--------------AGVLPDGKAEAIKRLQSQGR  713 (834)
T ss_pred             cchhhHHHHHHHHHH-CCCeEEEEcCCCHHH-HHHHHHHcCCCEEE--------------eCCCHHHHHHHHHHHhhcCC
Confidence            456778888888886 455 56677755532 11122233332111              11112223456777777888


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      +++||||+ ..|+.++++||+   .|.+|..+......    ..+.+..+++.+|..++.
T Consensus       714 ~v~~vGDg-~nD~~al~~Agv---gia~g~g~~~a~~~----ad~vl~~~~~~~i~~~i~  765 (834)
T PRK10671        714 QVAMVGDG-INDAPALAQADV---GIAMGGGSDVAIET----AAITLMRHSLMGVADALA  765 (834)
T ss_pred             EEEEEeCC-HHHHHHHHhCCe---eEEecCCCHHHHHh----CCEEEecCCHHHHHHHHH
Confidence            99999999 599999999998   55566555544432    346666789999988775

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=96.69  E-value=0.012  Score=46.75  Aligned_cols=100  Identities=14%  Similarity=0.173  Sum_probs=65.4

Q ss_pred             CCHHHHHHHHHHHHcCCCc-eEEEecCCCccccCCCcc--cccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC
Q 025117          116 FNYYKVQYGTLCIRENPGC-LFIATNRDAVTHLTDAQE--WAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ  192 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~--~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~  192 (257)
                      .-|++...+++.-+. .|+ ++|-|+...  ++ ..+.  +...|.+-..+....+..  .-+|-...-|..+....|++
T Consensus       103 hlypDav~~ik~wk~-~g~~vyiYSSGSV--~A-QkL~Fghs~agdL~~lfsGyfDtt--iG~KrE~~SY~kIa~~iGl~  176 (229)
T COG4229         103 HLYPDAVQAIKRWKA-LGMRVYIYSSGSV--KA-QKLFFGHSDAGDLNSLFSGYFDTT--IGKKRESQSYAKIAGDIGLP  176 (229)
T ss_pred             ccCHhHHHHHHHHHH-cCCcEEEEcCCCc--hh-HHHhhcccccccHHhhhcceeecc--ccccccchhHHHHHHhcCCC
Confidence            357776666665554 455 555555443  11 1111  112343333333322221  22577888999999999999


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeEEEEcc
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKTLLVLS  222 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~  222 (257)
                      |.+++++.|++ ..+.+|+.+||.|+++.+
T Consensus       177 p~eilFLSDn~-~EL~AA~~vGl~t~l~~R  205 (229)
T COG4229         177 PAEILFLSDNP-EELKAAAGVGLATGLAVR  205 (229)
T ss_pred             chheEEecCCH-HHHHHHHhcchheeeeec
Confidence            99999999995 899999999999998854

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=96.57  E-value=0.0057  Score=51.57  Aligned_cols=50  Identities=24%  Similarity=0.373  Sum_probs=44.5

Q ss_pred             cCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       174 ~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      .++++...++.+++.++++++++++|||+ ..|+.+.+.+|..++.|..+.
T Consensus       164 ~~~~K~~al~~l~~~~~i~~~~~i~~GD~-~ND~~ml~~~~~~~va~~na~  213 (249)
T TIGR01485       164 QGSGKGQALQYLLQKLAMEPSQTLVCGDS-GNDIELFEIGSVRGVIVSNAQ  213 (249)
T ss_pred             CCCChHHHHHHHHHHcCCCccCEEEEECC-hhHHHHHHccCCcEEEECCCH
Confidence            36778888999999999999999999999 699999999888899997653

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=96.53  E-value=0.0061  Score=50.93  Aligned_cols=46  Identities=20%  Similarity=0.281  Sum_probs=39.8

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEcc
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS  222 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~  222 (257)
                      +++++..++.++++++++++++++|||+ .+|+.+.+.+| .++.|..
T Consensus       157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~-~nD~~ml~~~~-~~iav~n  202 (236)
T TIGR02471       157 RASKGLALRYLSYRWGLPLEQILVAGDS-GNDEEMLRGLT-LGVVVGN  202 (236)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEEcCC-ccHHHHHcCCC-cEEEEcC
Confidence            6777888999999999999999999999 69999999987 5555654

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=96.40  E-value=0.0053  Score=50.65  Aligned_cols=61  Identities=23%  Similarity=0.314  Sum_probs=46.5

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECC
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK  245 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~  245 (257)
                      +.++...++.+++++|++++++++|||+ ..|+.+.+.+|+. +.+..+   .+++.     ..++++..+
T Consensus       147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~-~NDi~m~~~ag~~-vam~Na---~~~~k-----~~A~~vt~~  207 (225)
T TIGR01482       147 GVNKGVAVKKLKEKLGIKPGETLVCGDS-ENDIDLFEVPGFG-VAVANA---QPELK-----EWADYVTES  207 (225)
T ss_pred             CCCHHHHHHHHHHHhCCCHHHEEEECCC-HhhHHHHHhcCce-EEcCCh---hHHHH-----HhcCeecCC
Confidence            5566678899999999999999999999 7999999999974 555543   22333     246776654

catalyze the same reaction as SPP.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=96.33  E-value=0.00076  Score=53.51  Aligned_cols=108  Identities=18%  Similarity=0.098  Sum_probs=57.7

Q ss_pred             CCHHHHHHHHHHHHcCCCc-eEEEecCCCccccCCCcccccCc----hHHHHHHhccCCCccccCCCcHHHHHHHHHHhC
Q 025117          116 FNYYKVQYGTLCIRENPGC-LFIATNRDAVTHLTDAQEWAGGG----SMVGAFVGSTQREPLVVGKPSTFMMDYLANKFG  190 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~~~~~g----~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~  190 (257)
                      --|+++...+..|+. .|. +.+||-.+..-.+...+..+++.    ...... .......++ .-.+..-|+.+.+..|
T Consensus        45 ~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~-~~F~~~eI~-~gsK~~Hf~~i~~~tg  121 (169)
T PF12689_consen   45 SLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLI-EYFDYLEIY-PGSKTTHFRRIHRKTG  121 (169)
T ss_dssp             ---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHHHTT-C-----------CCECEEEES-SS-HHHHHHHHHHHH-
T ss_pred             EeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHHhcCCCccccccccch-hhcchhhee-cCchHHHHHHHHHhcC
Confidence            357789999999987 566 55665333321112122222222    000111 111111122 2367788999999999


Q ss_pred             CCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCCh
Q 025117          191 IQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL  227 (257)
Q Consensus       191 ~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~  227 (257)
                      ++.++++++.|. ...+.-..+.|+.+++|..|.+..
T Consensus       122 I~y~eMlFFDDe-~~N~~~v~~lGV~~v~v~~Glt~~  157 (169)
T PF12689_consen  122 IPYEEMLFFDDE-SRNIEVVSKLGVTCVLVPDGLTWD  157 (169)
T ss_dssp             --GGGEEEEES--HHHHHHHHTTT-EEEE-SSS--HH
T ss_pred             CChhHEEEecCc-hhcceeeEecCcEEEEeCCCCCHH
Confidence            999999999999 799999999999999999987644

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=96.21  E-value=0.0073  Score=50.02  Aligned_cols=62  Identities=23%  Similarity=0.325  Sum_probs=47.4

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECCh
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI  246 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l  246 (257)
                      +..++..++.+++.+|++++++++|||+ ..|+.+.+.+|+. +.+..+.   +.+.     ..++++..+-
T Consensus       155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~-~NDi~m~~~ag~~-vam~Na~---~~vk-----~~a~~v~~~n  216 (230)
T PRK01158        155 GVNKGTGLKKLAELMGIDPEEVAAIGDS-ENDLEMFEVAGFG-VAVANAD---EELK-----EAADYVTEKS  216 (230)
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCc-hhhHHHHHhcCce-EEecCcc---HHHH-----HhcceEecCC
Confidence            5556788899999999999999999999 6999999999975 4555432   2333     2467777653

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=96.01  E-value=0.011  Score=48.01  Aligned_cols=43  Identities=16%  Similarity=0.190  Sum_probs=38.7

Q ss_pred             cCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeE
Q 025117          174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT  217 (257)
Q Consensus       174 ~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~t  217 (257)
                      .+.+++..++.++++++++++++++|||+ .+|+.+.+.+|+..
T Consensus       160 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~-~nD~~~~~~~~~~v  202 (204)
T TIGR01484       160 AGVDKGSALQALLKELNGKRDEILAFGDS-GNDEEMFEVAGLAV  202 (204)
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEEcCC-HHHHHHHHHcCCce
Confidence            36777899999999999999999999999 79999999999754

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=95.86  E-value=0.34  Score=40.89  Aligned_cols=71  Identities=18%  Similarity=0.286  Sum_probs=57.8

Q ss_pred             CCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCeee
Q 025117            6 GKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL   81 (257)
Q Consensus         6 g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~~   81 (257)
                      -..|+++|+|+..+--.+.+.++..|++++- -++|++.....||+..+.    ..|+-......+..-+.|+...
T Consensus        36 ~VEVVllSRNspdTGlRv~nSI~hygL~ItR-~~ft~G~~~~~Yl~af~v----~LFLSan~~DV~~Ai~~G~~Aa  106 (264)
T PF06189_consen   36 LVEVVLLSRNSPDTGLRVFNSIRHYGLDITR-AAFTGGESPYPYLKAFNV----DLFLSANEDDVQEAIDAGIPAA  106 (264)
T ss_pred             ceEEEEEecCCHHHHHHHHHhHHHhCCccee-eeecCCCCHHHHHHHhCC----ceEeeCCHHHHHHHHHcCCCcE
Confidence            3468999999999999999999999999874 588999999999997643    4677777777777777787553

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=95.79  E-value=0.21  Score=37.60  Aligned_cols=116  Identities=15%  Similarity=0.139  Sum_probs=75.0

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCc-cccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP-LVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~-~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      |+.+.+.+..|...  +-+++.+.|+..            .+.+ +..-.|.+. ..+.--+|++=..+++.++.+-+.|
T Consensus        32 f~ev~e~iqeL~d~--V~i~IASgDr~g------------sl~~-lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~   96 (152)
T COG4087          32 FSEVSETIQELHDM--VDIYIASGDRKG------------SLVQ-LAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKV   96 (152)
T ss_pred             cHhhHHHHHHHHHh--heEEEecCCcch------------HHHH-HHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEE
Confidence            45566666666642  444445556522            1111 111123322 3345567788888899998777899


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +||||- .+|+.+=++|.+.-+-+..+.-+...+      ..+|+++.++.|+++++..
T Consensus        97 vmVGnG-aND~laLr~ADlGI~tiq~e~v~~r~l------~~ADvvik~i~e~ldl~~~  148 (152)
T COG4087          97 VMVGNG-ANDILALREADLGICTIQQEGVPERLL------LTADVVLKEIAEILDLLKD  148 (152)
T ss_pred             EEecCC-cchHHHhhhcccceEEeccCCcchHHH------hhchhhhhhHHHHHHHhhc
Confidence            999999 799999999987766565543333333      3689999999999988653

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=95.79  E-value=0.021  Score=47.04  Aligned_cols=41  Identities=12%  Similarity=0.204  Sum_probs=35.3

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEE
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTL  218 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti  218 (257)
                      .|++  ..+.+++.+|++++++++|||+ ..|+.+-+.+|...+
T Consensus       179 ~Kg~--al~~l~~~lgi~~~~vi~~GD~-~NDi~ml~~ag~~va  219 (221)
T TIGR02463       179 SKGK--AANWLKATYNQPDVKTLGLGDG-PNDLPLLEVADYAVV  219 (221)
T ss_pred             CHHH--HHHHHHHHhCCCCCcEEEECCC-HHHHHHHHhCCceEE
Confidence            4554  5789999999999999999999 699999999996543

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=95.74  E-value=0.014  Score=58.14  Aligned_cols=128  Identities=14%  Similarity=0.057  Sum_probs=80.1

Q ss_pred             CCCHHHHHHHHHHHHcCCCc-eEEEecCCCccccCCCcccccCch---------HHH-----HHHhccCCCccccCCCcH
Q 025117          115 YFNYYKVQYGTLCIRENPGC-LFIATNRDAVTHLTDAQEWAGGGS---------MVG-----AFVGSTQREPLVVGKPST  179 (257)
Q Consensus       115 ~~~~~~~~~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~~~~~g~---------~~~-----~i~~~~~~~~~~~gKP~p  179 (257)
                      ...+++..++++.+++ .|+ +.++|+...... .......|+..         -++     .+.... .+...+..++|
T Consensus       527 Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA-~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~-~~~~Vfar~~P  603 (884)
T TIGR01522       527 DPPRPGVKEAVTTLIT-GGVRIIMITGDSQETA-VSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIV-PKVAVFARASP  603 (884)
T ss_pred             CcchhHHHHHHHHHHH-CCCeEEEECCCCHHHH-HHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHh-hcCeEEEECCH
Confidence            4578889999999987 455 556677655321 11111222211         010     000000 11235667778


Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEE--CChhhHHHHHH
Q 025117          180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKA  254 (257)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~--~~l~el~~~l~  254 (257)
                      +--..+.+.++...+.+.||||. ..|+.+.++|++   .|..|....+ ..+    ..+|+++  +++..+...+.
T Consensus       604 ~~K~~iv~~lq~~g~~v~mvGDG-vND~pAl~~AdV---Gia~g~~g~~-va~----~aaDivl~dd~~~~i~~~i~  671 (884)
T TIGR01522       604 EHKMKIVKALQKRGDVVAMTGDG-VNDAPALKLADI---GVAMGQTGTD-VAK----EAADMILTDDDFATILSAIE  671 (884)
T ss_pred             HHHHHHHHHHHHCCCEEEEECCC-cccHHHHHhCCe---eEecCCCcCH-HHH----HhcCEEEcCCCHHHHHHHHH
Confidence            77777777777667889999999 699999999994   5666643222 222    4689999  77999987654

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=95.68  E-value=0.00064  Score=53.69  Aligned_cols=94  Identities=11%  Similarity=-0.053  Sum_probs=61.2

Q ss_pred             HHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCch-HHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEE
Q 025117          119 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGS-MVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC  197 (257)
Q Consensus       119 ~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~-~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  197 (257)
                      +.+.+.+..+... --++|.|++...+.. ..+...+... +++.+   .+++.....||.   |...++.+|.++++++
T Consensus        45 Pgl~eFL~~l~~~-yei~I~Ts~~~~yA~-~il~~ldp~~~~f~~~---l~r~~~~~~~~~---~~K~L~~l~~~~~~vI  116 (162)
T TIGR02251        45 PHVDEFLERVSKW-YELVIFTASLEEYAD-PVLDILDRGGKVISRR---LYRESCVFTNGK---YVKDLSLVGKDLSKVI  116 (162)
T ss_pred             CCHHHHHHHHHhc-CEEEEEcCCcHHHHH-HHHHHHCcCCCEEeEE---EEccccEEeCCC---EEeEchhcCCChhhEE
Confidence            4567778777753 447788988876532 2223333221 32222   233444445665   6677888999999999


Q ss_pred             EEcCChhhHHHHHHHcCCeEEEEc
Q 025117          198 MVGDRLDTDILFGQNGGCKTLLVL  221 (257)
Q Consensus       198 ~IGD~~~~Di~~A~~aG~~ti~V~  221 (257)
                      ||||+ ..|+.++.++|+...-..
T Consensus       117 iVDD~-~~~~~~~~~NgI~i~~f~  139 (162)
T TIGR02251       117 IIDNS-PYSYSLQPDNAIPIKSWF  139 (162)
T ss_pred             EEeCC-hhhhccCccCEeecCCCC
Confidence            99999 599999999998755443

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=95.68  E-value=0.064  Score=41.65  Aligned_cols=76  Identities=30%  Similarity=0.441  Sum_probs=53.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|.+++++||+   +++.....|+++|+.--.+.|+++.         ......+++.+.++ +.++++| +....+
T Consensus        89 l~~~~~~~~i~Sn~---~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p-~~~~~vgD~~~d~~  164 (176)
T PF13419_consen   89 LKAKGIPLVIVSNG---SRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPP-EEILFVGDSPSDVE  164 (176)
T ss_dssp             HHHTTSEEEEEESS---EHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSG-GGEEEEESSHHHHH
T ss_pred             cccccceeEEeecC---CcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCc-ceEEEEeCCHHHHH
Confidence            67789999999996   4677788899999985556788775         34455555556544 4566666 445566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+++|+..+
T Consensus       165 ~A~~~G~~~i  174 (176)
T PF13419_consen  165 AAKEAGIKTI  174 (176)
T ss_dssp             HHHHTTSEEE
T ss_pred             HHHHcCCeEE
Confidence            6777887653

...

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=95.39  E-value=0.026  Score=46.32  Aligned_cols=59  Identities=22%  Similarity=0.315  Sum_probs=44.1

Q ss_pred             CcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECC
Q 025117          177 PSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK  245 (257)
Q Consensus       177 P~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~  245 (257)
                      -+...++.+++.++++++++++|||+ ..|+.+.+.+|+. +.+..+   .+++.     ..++++.++
T Consensus       147 ~K~~~i~~l~~~~~i~~~~~i~iGDs-~ND~~ml~~ag~~-vam~na---~~~~k-----~~A~~v~~~  205 (215)
T TIGR01487       147 DKGVGVEKLKELLGIKPEEVAAIGDS-ENDIDLFRVVGFK-VAVANA---DDQLK-----EIADYVTSN  205 (215)
T ss_pred             ChHHHHHHHHHHhCCCHHHEEEECCC-HHHHHHHHhCCCe-EEcCCc---cHHHH-----HhCCEEcCC
Confidence            34458899999999999999999999 6999999999965 444433   23333     246777654

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=95.09  E-value=0.04  Score=47.11  Aligned_cols=46  Identities=13%  Similarity=0.158  Sum_probs=37.9

Q ss_pred             CcHHHHHHHHHHhCCCC-CcEEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          177 PSTFMMDYLANKFGIQK-SQICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       177 P~p~~~~~~~~~~~~~~-~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      .+...++++++.+++++ +++++|||+ ..|+.+++.+|+. +.+..+.
T Consensus       190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs-~NDi~m~~~ag~~-vam~NA~  236 (273)
T PRK00192        190 DKGKAVRWLKELYRRQDGVETIALGDS-PNDLPMLEAADIA-VVVPGPD  236 (273)
T ss_pred             CHHHHHHHHHHHHhccCCceEEEEcCC-hhhHHHHHhCCee-EEeCCCC
Confidence            44567888999999999 999999999 6999999999954 4455444

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=94.98  E-value=0.12  Score=44.24  Aligned_cols=65  Identities=17%  Similarity=0.044  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHc---CCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          179 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG---GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       179 p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~a---G~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      -...+.+++.+++..+++++|||+ .+|+.+=+.+   |-.+|.|..+.            ..+.|.+++..++..+|..
T Consensus       176 g~al~~ll~~~~~~~~~v~~~GD~-~nD~~mf~~~~~~~g~~vavg~a~------------~~A~~~l~~~~~v~~~L~~  242 (266)
T PRK10187        176 GEAIAAFMQEAPFAGRTPVFVGDD-LTDEAGFAVVNRLGGISVKVGTGA------------TQASWRLAGVPDVWSWLEM  242 (266)
T ss_pred             HHHHHHHHHhcCCCCCeEEEEcCC-ccHHHHHHHHHhcCCeEEEECCCC------------CcCeEeCCCHHHHHHHHHH
Confidence            466788889999999999999999 6998875555   45667775432            3578899999999888865


Q ss_pred             h
Q 025117          256 A  256 (257)
Q Consensus       256 ~  256 (257)
                      +
T Consensus       243 l  243 (266)
T PRK10187        243 I  243 (266)
T ss_pred             H
Confidence            4

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=94.71  E-value=0.058  Score=45.51  Aligned_cols=60  Identities=20%  Similarity=0.245  Sum_probs=44.7

Q ss_pred             CcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECCh
Q 025117          177 PSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI  246 (257)
Q Consensus       177 P~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l  246 (257)
                      -+-..++.+++.++++++++++|||+ ..|+.+.+.+|+. +.+..   ..+.+.     ..++++.++-
T Consensus       188 ~K~~~i~~~~~~~~~~~~~~~~~GD~-~nD~~m~~~~~~~-~a~~n---a~~~~k-----~~a~~~~~~n  247 (256)
T TIGR00099       188 SKGSALQSLAEALGISLEDVIAFGDG-MNDIEMLEAAGYG-VAMGN---ADEELK-----ALADYVTDSN  247 (256)
T ss_pred             ChHHHHHHHHHHcCCCHHHEEEeCCc-HHhHHHHHhCCce-eEecC---chHHHH-----HhCCEEecCC
Confidence            34577889999999999999999999 6999999999975 33332   233343     2467776653

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=94.28  E-value=0.26  Score=41.56  Aligned_cols=47  Identities=11%  Similarity=0.063  Sum_probs=38.1

Q ss_pred             CCcHHHHHHHHHHhCCC--CCcEEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          176 KPSTFMMDYLANKFGIQ--KSQICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       176 KP~p~~~~~~~~~~~~~--~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      -.+....+.+++.++++  ++++++|||+ ..|+.+-+.+| .++.+..+.
T Consensus       175 ~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~-~ND~~Ml~~ag-~~vam~Na~  223 (256)
T TIGR01486       175 SDKGKAANALKQFYNQPGGAIKVVGLGDS-PNDLPLLEVVD-LAVVVPGPN  223 (256)
T ss_pred             CCHHHHHHHHHHHHhhcCCCceEEEEcCC-HhhHHHHHHCC-EEEEeCCCC
Confidence            34456688999999999  9999999999 69999999999 455565543

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=93.68  E-value=0.36  Score=36.14  Aligned_cols=78  Identities=23%  Similarity=0.382  Sum_probs=46.8

Q ss_pred             ChhccCCcEEEEeCCCCcC-----HHHHHHHHHhCCCCCCCCceechH-------HHHHHHHHhc-CCCCCCEEEEEcC-
Q 025117            1 MLRSKGKRLVFVTNNSTKS-----RKQYGKKFETLGLTVTEEEIFASS-------FAAAAYLKSI-DFPKDKKVYVVGE-   66 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~-----~~~~~~~L~~~G~~~~~~~i~ts~-------~~~~~~l~~~-~~~~~~~v~vlg~-   66 (257)
                      .|++.|++++++||++...     .+.+.+.|+++|+..  +.++.+.       ......+++. +.. ...+.++|- 
T Consensus        36 ~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~KP~~~~~~~~~~~~~~~~-~~~~v~IGD~  112 (132)
T TIGR01662        36 ELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPI--DVLYACPHCRKPKPGMFLEALKRFNEID-PEESVYVGDQ  112 (132)
T ss_pred             HHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCE--EEEEECCCCCCCChHHHHHHHHHcCCCC-hhheEEEcCC
Confidence            3788999999999977333     455777788899862  2222221       2233334444 242 345667776 


Q ss_pred             -HHHHHHHHHcCCeee
Q 025117           67 -DGILKELELAGFQYL   81 (257)
Q Consensus        67 -~~~~~~l~~~g~~~~   81 (257)
                       .......+.+|+..+
T Consensus       113 ~~~Di~~A~~~Gi~~i  128 (132)
T TIGR01662       113 DLTDLQAAKRAGLAFI  128 (132)
T ss_pred             CcccHHHHHHCCCeEE
Confidence             345556677777654

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=93.57  E-value=0.11  Score=44.03  Aligned_cols=61  Identities=18%  Similarity=0.294  Sum_probs=46.5

Q ss_pred             CCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECCh
Q 025117          176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI  246 (257)
Q Consensus       176 KP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l  246 (257)
                      --+...++.+++.+|+++++++.|||+ ..|+.+-+.+|. ++.+..+   .+++.     ..++++..+-
T Consensus       195 vsKg~al~~l~~~~gi~~~~v~afGD~-~NDi~Ml~~ag~-~vAm~NA---~~~vK-----~~A~~vt~~n  255 (270)
T PRK10513        195 VNKGTGVKSLAEHLGIKPEEVMAIGDQ-ENDIAMIEYAGV-GVAMGNA---IPSVK-----EVAQFVTKSN  255 (270)
T ss_pred             CChHHHHHHHHHHhCCCHHHEEEECCc-hhhHHHHHhCCc-eEEecCc---cHHHH-----HhcCeeccCC
Confidence            334578899999999999999999999 799999999997 5555543   23333     2567777654

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=93.52  E-value=0.12  Score=50.73  Aligned_cols=111  Identities=14%  Similarity=0.077  Sum_probs=63.9

Q ss_pred             CCHHHHHHHHHHHHcCCCc-eEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCC
Q 025117          116 FNYYKVQYGTLCIRENPGC-LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~  194 (257)
                      ..+++..++++.|++ .|+ ..++|+..... ........|+..+       .+..+  ..||+      ++++++ .++
T Consensus       568 ~~r~~a~~~i~~L~~-~gi~~~llTGd~~~~-a~~ia~~lgi~~~-------~~~~p--~~K~~------~v~~l~-~~~  629 (741)
T PRK11033        568 TLRADARQAISELKA-LGIKGVMLTGDNPRA-AAAIAGELGIDFR-------AGLLP--EDKVK------AVTELN-QHA  629 (741)
T ss_pred             CCchhHHHHHHHHHH-CCCEEEEEcCCCHHH-HHHHHHHcCCCee-------cCCCH--HHHHH------HHHHHh-cCC
Confidence            356778889999987 455 55666654432 2212233343211       01100  12332      344454 346


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEE--CChhhHHHHHH
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKA  254 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~--~~l~el~~~l~  254 (257)
                      +++||||. ..|..+.++|+   +.|..|..+.....      ..|.++  +++.+|.+++.
T Consensus       630 ~v~mvGDg-iNDapAl~~A~---vgia~g~~~~~a~~------~adivl~~~~l~~l~~~i~  681 (741)
T PRK11033        630 PLAMVGDG-INDAPAMKAAS---IGIAMGSGTDVALE------TADAALTHNRLRGLAQMIE  681 (741)
T ss_pred             CEEEEECC-HHhHHHHHhCC---eeEEecCCCHHHHH------hCCEEEecCCHHHHHHHHH
Confidence            89999999 59999999999   55555544433332      245544  78888887654

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=93.24  E-value=0.38  Score=40.99  Aligned_cols=72  Identities=11%  Similarity=0.044  Sum_probs=50.0

Q ss_pred             cHHHHHHHHHHhCC---CCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChh--hHHHH
Q 025117          178 STFMMDYLANKFGI---QKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKIS--DFLSL  252 (257)
Q Consensus       178 ~p~~~~~~~~~~~~---~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~--el~~~  252 (257)
                      +-...+.+++.+|+   ++++++.|||+ ..|+.+=+.+|. ++.+.......+.+..  ....++|+.+...  .+.+.
T Consensus       188 Kg~al~~l~~~lgi~~~~~~~viafGDs-~NDi~Ml~~ag~-gvAM~~~~~~~~~l~~--~~~~~~~~~~~~~~~g~~~~  263 (271)
T PRK03669        188 KDQAANWLIATYQQLSGTRPTTLGLGDG-PNDAPLLDVMDY-AVVVKGLNREGVHLQD--DDPARVYRTQREGPEGWREG  263 (271)
T ss_pred             HHHHHHHHHHHHHhhcCCCceEEEEcCC-HHHHHHHHhCCE-EEEecCCCCCCccccc--ccCCceEeccCCCcHHHHHH
Confidence            34667899999999   99999999999 799999999994 6666644322222321  1246788777655  34443


Q ss_pred             H
Q 025117          253 K  253 (257)
Q Consensus       253 l  253 (257)
                      +
T Consensus       264 l  264 (271)
T PRK03669        264 L  264 (271)
T ss_pred             H
Confidence            3

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=92.80  E-value=0.73  Score=37.04  Aligned_cols=76  Identities=20%  Similarity=0.270  Sum_probs=47.4

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHH---------HHHHHHhcCCCCCCEEEEEcC-HHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA---------AAAYLKSIDFPKDKKVYVVGE-DGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~---------~~~~l~~~~~~~~~~v~vlg~-~~~~~   71 (257)
                      |+++|+++.++||++   .+.+...|+++|+.---+.|++|...         ....+++.+..+ ..++++|- ....+
T Consensus       104 L~~~g~~~~i~Sn~~---~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p-~~~~~vgD~~~Di~  179 (198)
T TIGR01428       104 LKERGYRLAILSNGS---PAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPP-DEVLFVASNPWDLG  179 (198)
T ss_pred             HHHCCCeEEEEeCCC---HHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCCh-hhEEEEeCCHHHHH
Confidence            678899999999954   45566778889985334667765432         223333444433 44666663 34445


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+..+
T Consensus       180 ~A~~~G~~~i  189 (198)
T TIGR01428       180 GAKKFGFKTA  189 (198)
T ss_pred             HHHHCCCcEE
Confidence            5677787654

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=92.77  E-value=0.88  Score=37.71  Aligned_cols=105  Identities=12%  Similarity=0.055  Sum_probs=70.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+++..++++-+. .|+.+.+=|++......-...+.+.|.+...+....+..  .-.|-....|..+.+.+|.++.+
T Consensus       123 ~v~aDv~~a~e~w~~-~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~--iG~K~e~~sy~~I~~~Ig~s~~e  199 (254)
T KOG2630|consen  123 HVYADVLPAIERWSG-EGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTT--IGLKVESQSYKKIGHLIGKSPRE  199 (254)
T ss_pred             cccchhHHHHHHHhh-cCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhcc--ccceehhHHHHHHHHHhCCChhh
Confidence            467777777777664 566555555555332221111234455555554433322  12477788999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      +++.-|. ..-..+|+.+|+.+.++.+..
T Consensus       200 iLfLTd~-~~Ea~aa~~aGl~a~l~~rPg  227 (254)
T KOG2630|consen  200 ILFLTDV-PREAAAARKAGLQAGLVSRPG  227 (254)
T ss_pred             eEEeccC-hHHHHHHHhcccceeeeecCC
Confidence            9999999 689999999999998886543

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=92.66  E-value=0.079  Score=45.26  Aligned_cols=84  Identities=10%  Similarity=-0.061  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCcccc--CCCcccccCch-HHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHL--TDAQEWAGGGS-MVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ  192 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~--~~~~~~~~~g~-~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~  192 (257)
                      ..++...+.+..+++.+..++++||++.....  ...+...|+.. ..+.+..   .+.   ++|++.-++.+.+.+++ 
T Consensus       118 ~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lll---r~~---~~~K~~rr~~I~~~y~I-  190 (266)
T TIGR01533       118 KPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLL---KKD---KSSKESRRQKVQKDYEI-  190 (266)
T ss_pred             CcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEe---CCC---CCCcHHHHHHHHhcCCE-
Confidence            34567777888887655568889998753211  01122233321 1122211   111   35666777777777776 


Q ss_pred             CCcEEEEcCChhhHHHHH
Q 025117          193 KSQICMVGDRLDTDILFG  210 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A  210 (257)
                         ++||||+ ..|+...
T Consensus       191 ---vl~vGD~-~~Df~~~  204 (266)
T TIGR01533       191 ---VLLFGDN-LLDFDDF  204 (266)
T ss_pred             ---EEEECCC-HHHhhhh
Confidence               8999999 5999764

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=92.54  E-value=0.19  Score=42.87  Aligned_cols=40  Identities=28%  Similarity=0.483  Sum_probs=34.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCC-CCCceec
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV-TEEEIFA   41 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~-~~~~i~t   41 (257)
                      |+++|.+++|+||++...++...+.|+++|++. ..+.|++
T Consensus       130 L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lll  170 (266)
T TIGR01533       130 ANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLL  170 (266)
T ss_pred             HHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEe
Confidence            568999999999999888999999999999985 5566763

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=92.15  E-value=0.17  Score=46.47  Aligned_cols=42  Identities=24%  Similarity=0.400  Sum_probs=31.6

Q ss_pred             HHHHHHHhCCCCCcEEEEcCChhhHHHHHHHc-CCeEEEEccC
Q 025117          182 MDYLANKFGIQKSQICMVGDRLDTDILFGQNG-GCKTLLVLSG  223 (257)
Q Consensus       182 ~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~a-G~~ti~V~~G  223 (257)
                      .....+.+|....++++|||++..||..++.. |++|++|-.-
T Consensus       284 ~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E  326 (448)
T PF05761_consen  284 WDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE  326 (448)
T ss_dssp             HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred             HHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence            34555667888889999999999999988776 9999999653

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=92.12  E-value=0.76  Score=36.10  Aligned_cols=75  Identities=21%  Similarity=0.303  Sum_probs=43.4

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEcC-HHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVGE-DGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg~-~~~~~   71 (257)
                      |+++|+++.++||++...    ...+.++|+.---+.|+++.         ......+++.+..+ ..++++|- ....+
T Consensus        97 l~~~g~~~~i~Tn~~~~~----~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~-~~~~~vgD~~~di~  171 (183)
T TIGR01509        97 LRARGKKLALLTNSPRDH----AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKP-EECLFVDDSPAGIE  171 (183)
T ss_pred             HHHCCCeEEEEeCCchHH----HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCc-ceEEEEcCCHHHHH
Confidence            678899999999966443    23334477754445555531         22333344445433 45666663 33455


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+..|+..+
T Consensus       172 aA~~~G~~~i  181 (183)
T TIGR01509       172 AAKAAGMHTV  181 (183)
T ss_pred             HHHHcCCEEE
Confidence            5677787653

HAD subfamilies caused by an overly broad single model.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=91.94  E-value=0.81  Score=36.19  Aligned_cols=76  Identities=22%  Similarity=0.288  Sum_probs=45.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHH-HHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHH--HHHHHHHcCC
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKK-FETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDG--ILKELELAGF   78 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~-L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~--~~~~l~~~g~   78 (257)
                      |++.|+++.++||++.   ...++. ++.+|+.......=-........+++.+.. ...++++|-..  .....+.+|+
T Consensus        55 Lk~~g~~l~I~Sn~~~---~~~~~~~~~~~gl~~~~~~~KP~p~~~~~~l~~~~~~-~~~~l~IGDs~~~Di~aA~~aGi  130 (170)
T TIGR01668        55 LKAAGRKLLIVSNNAG---EQRAKAVEKALGIPVLPHAVKPPGCAFRRAHPEMGLT-SEQVAVVGDRLFTDVMGGNRNGS  130 (170)
T ss_pred             HHHcCCEEEEEeCCch---HHHHHHHHHHcCCEEEcCCCCCChHHHHHHHHHcCCC-HHHEEEECCcchHHHHHHHHcCC
Confidence            6788999999999763   223333 356777532111122333445556665553 35688888653  5666677888


Q ss_pred             eee
Q 025117           79 QYL   81 (257)
Q Consensus        79 ~~~   81 (257)
                      ..+
T Consensus       131 ~~i  133 (170)
T TIGR01668       131 YTI  133 (170)
T ss_pred             eEE
Confidence            765

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=91.78  E-value=1.1  Score=35.22  Aligned_cols=78  Identities=21%  Similarity=0.350  Sum_probs=45.6

Q ss_pred             ChhccCCcEEEEeCCCCc------------CHHHHHHHHHhCCCCCCCCcee-c------------hHH-HHHHHHHhcC
Q 025117            1 MLRSKGKRLVFVTNNSTK------------SRKQYGKKFETLGLTVTEEEIF-A------------SSF-AAAAYLKSID   54 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~------------~~~~~~~~L~~~G~~~~~~~i~-t------------s~~-~~~~~l~~~~   54 (257)
                      .|+++|.+++++||.++.            ....+.+.|..+|+.  -+.++ +            +.. .....+++.+
T Consensus        40 ~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~  117 (161)
T TIGR01261        40 KLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNL  117 (161)
T ss_pred             HHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            378899999999997532            223445557888987  33343 2            112 2223333333


Q ss_pred             CCCCCEEEEEc-CHHHHHHHHHcCCeee
Q 025117           55 FPKDKKVYVVG-EDGILKELELAGFQYL   81 (257)
Q Consensus        55 ~~~~~~v~vlg-~~~~~~~l~~~g~~~~   81 (257)
                      .. ...++++| +....+..+..|+...
T Consensus       118 ~~-~~e~l~IGD~~~Di~~A~~aGi~~i  144 (161)
T TIGR01261       118 ID-KARSYVIGDRETDMQLAENLGIRGI  144 (161)
T ss_pred             CC-HHHeEEEeCCHHHHHHHHHCCCeEE
Confidence            32 24577777 4445666677787664

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=91.51  E-value=0.7  Score=46.53  Aligned_cols=72  Identities=13%  Similarity=0.114  Sum_probs=50.1

Q ss_pred             ccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECC--hhhHH
Q 025117          173 VVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK--ISDFL  250 (257)
Q Consensus       173 ~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~--l~el~  250 (257)
                      .+..-.|+-=..+.+.++...+.+.||||. ..|+.+-++|++ +|.+..|  + +...     ..+|+++.+  +..+.
T Consensus       610 v~ar~~P~~K~~iV~~lq~~g~~va~iGDG-~ND~~alk~AdV-Gia~g~g--~-~~ak-----~aAD~vl~dd~f~~i~  679 (917)
T TIGR01116       610 LFSRVEPSHKSELVELLQEQGEIVAMTGDG-VNDAPALKKADI-GIAMGSG--T-EVAK-----EASDMVLADDNFATIV  679 (917)
T ss_pred             EEEecCHHHHHHHHHHHHhcCCeEEEecCC-cchHHHHHhCCe-eEECCCC--c-HHHH-----HhcCeEEccCCHHHHH
Confidence            445555555566666777666789999999 699999999998 3433333  2 2222     368999976  98888


Q ss_pred             HHHH
Q 025117          251 SLKA  254 (257)
Q Consensus       251 ~~l~  254 (257)
                      +++.
T Consensus       680 ~~i~  683 (917)
T TIGR01116       680 AAVE  683 (917)
T ss_pred             HHHH
Confidence            7654

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=91.15  E-value=1.1  Score=39.47  Aligned_cols=102  Identities=15%  Similarity=0.114  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhc---cCCCc--cccCCCcHH--------HHH---
Q 025117          120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGS---TQREP--LVVGKPSTF--------MMD---  183 (257)
Q Consensus       120 ~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~---~~~~~--~~~gKP~p~--------~~~---  183 (257)
                      ++...++.|+..+..++++||.+..+... ++...-...+-+.+..+   .....  .--.+|-..        .++   
T Consensus       244 ql~~fl~kL~~~GKklFLiTNSPysFVd~-GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~  322 (510)
T KOG2470|consen  244 QLLAFLRKLKDHGKKLFLITNSPYSFVDK-GMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVD  322 (510)
T ss_pred             HHHHHHHHHHHhcCcEEEEeCCchhhhhc-CceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhh
Confidence            45566667776556689999999877533 43322112333333221   11100  001222211        111   


Q ss_pred             --------------HHHHHhCCCCCcEEEEcCChhhHHHHHH-HcCCeEEEEcc
Q 025117          184 --------------YLANKFGIQKSQICMVGDRLDTDILFGQ-NGGCKTLLVLS  222 (257)
Q Consensus       184 --------------~~~~~~~~~~~~~~~IGD~~~~Di~~A~-~aG~~ti~V~~  222 (257)
                                    ..++.-|..-.+++++||.+.+|+..-. +.|++|-.+-.
T Consensus       323 klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~  376 (510)
T KOG2470|consen  323 KLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP  376 (510)
T ss_pred             hcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence                          2223334556789999999999999876 89999877653

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=91.10  E-value=1.5  Score=35.50  Aligned_cols=76  Identities=24%  Similarity=0.295  Sum_probs=47.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEcCH-HHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVGED-GILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg~~-~~~~   71 (257)
                      |+++|+++.++||++   ...+...|..+|+.---+.++++.         ......+++.+.. ...++++|-. ...+
T Consensus        87 L~~~g~~~~i~Sn~~---~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~~~~l~igD~~~Di~  162 (205)
T TIGR01454        87 LRADGVGTAIATGKS---GPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVP-PEDAVMVGDAVTDLA  162 (205)
T ss_pred             HHHCCCeEEEEeCCc---hHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCC-hhheEEEcCCHHHHH
Confidence            678899999999954   334556678888853334555432         2333444444543 3457777743 4556


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+..+
T Consensus       163 aA~~~Gi~~i  172 (205)
T TIGR01454       163 SARAAGTATV  172 (205)
T ss_pred             HHHHcCCeEE
Confidence            6678888764

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK10976 putative hydrolase; Provisional

Probab=91.02  E-value=0.26  Score=41.71  Aligned_cols=43  Identities=16%  Similarity=0.165  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccC
Q 025117          179 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG  223 (257)
Q Consensus       179 p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G  223 (257)
                      ...++.+++.+|+++++++.|||+ ..|+.+=+.+|. ++.+..+
T Consensus       192 g~al~~l~~~lgi~~~~viafGD~-~NDi~Ml~~ag~-~vAm~NA  234 (266)
T PRK10976        192 GHALEAVAKKLGYSLKDCIAFGDG-MNDAEMLSMAGK-GCIMGNA  234 (266)
T ss_pred             HHHHHHHHHHcCCCHHHeEEEcCC-cccHHHHHHcCC-CeeecCC
Confidence            577889999999999999999999 799999999997 5566554

>PLN02645 phosphoglycolate phosphatase

Probab=90.64  E-value=0.48  Score=41.38  Aligned_cols=100  Identities=15%  Similarity=-0.018  Sum_probs=55.7

Q ss_pred             ccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccC--CCcccccCchHHHHHHhccCCCccccCCCcHHHH
Q 025117          105 VGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLT--DAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMM  182 (257)
Q Consensus       105 ~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~--~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~  182 (257)
                      +|.|++..+  ..++...++++.|++++...+++||........  ..+...|+....+.           +-.+. ...
T Consensus        35 ~DGtl~~~~--~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~-----------I~ts~-~~~  100 (311)
T PLN02645         35 CDGVIWKGD--KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEE-----------IFSSS-FAA  100 (311)
T ss_pred             CcCCeEeCC--ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhh-----------EeehH-HHH
Confidence            455555433  346778899999987555577889976533211  00111221100111           11121 233


Q ss_pred             HHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEE
Q 025117          183 DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLL  219 (257)
Q Consensus       183 ~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~  219 (257)
                      ...++..+....+.++|+++ ..+...++.+|+..+.
T Consensus       101 ~~~l~~~~~~~~~~V~viG~-~~~~~~l~~~Gi~~~~  136 (311)
T PLN02645        101 AAYLKSINFPKDKKVYVIGE-EGILEELELAGFQYLG  136 (311)
T ss_pred             HHHHHhhccCCCCEEEEEcC-HHHHHHHHHCCCEEec
Confidence            34445555544456777778 6899999999998754

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=90.61  E-value=0.85  Score=35.40  Aligned_cols=76  Identities=17%  Similarity=0.186  Sum_probs=49.3

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEc-CHHHHHHHHHcCCe
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVG-EDGILKELELAGFQ   79 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~~   79 (257)
                      +|+++|.++.++||.+.   ....+.++++|+.--.+..-........++++.+.. .+.++++| +....+.++..|+.
T Consensus        39 ~Lk~~G~~i~IvTn~~~---~~~~~~l~~~gi~~~~~~~~~k~~~~~~~~~~~~~~-~~~~~~vGDs~~D~~~~~~ag~~  114 (154)
T TIGR01670        39 CALKSGIEVAIITGRKA---KLVEDRCKTLGITHLYQGQSNKLIAFSDILEKLALA-PENVAYIGDDLIDWPVMEKVGLS  114 (154)
T ss_pred             HHHHCCCEEEEEECCCC---HHHHHHHHHcCCCEEEecccchHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCe
Confidence            37789999999999554   344566788888621112223445566666665543 35678888 45667778888876


Q ss_pred             e
Q 025117           80 Y   80 (257)
Q Consensus        80 ~   80 (257)
                      .
T Consensus       115 ~  115 (154)
T TIGR01670       115 V  115 (154)
T ss_pred             E
Confidence            4

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=90.20  E-value=2  Score=31.23  Aligned_cols=39  Identities=33%  Similarity=0.487  Sum_probs=28.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS   43 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~   43 (257)
                      |+++|.+++++||+.   ++.+...++.+|+....+.++++.
T Consensus        36 l~~~g~~i~ivS~~~---~~~~~~~~~~~~~~~~~~~i~~~~   74 (139)
T cd01427          36 LKEKGIKLALATNKS---RREVLELLEELGLDDYFDPVITSN   74 (139)
T ss_pred             HHHCCCeEEEEeCch---HHHHHHHHHHcCCchhhhheeccc
Confidence            678899999999955   677777788888864555555433

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PRK11587 putative phosphatase; Provisional

Probab=90.20  E-value=2.8  Score=34.31  Aligned_cols=75  Identities=16%  Similarity=0.119  Sum_probs=43.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHH---------HHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA---------AAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~---------~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|+++.++||++..   .....++..|+.. .+.|+++...         ....+++.+..+ ..++++| +....+
T Consensus        95 L~~~g~~~~ivTn~~~~---~~~~~l~~~~l~~-~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p-~~~l~igDs~~di~  169 (218)
T PRK11587         95 LNKLGIPWAIVTSGSVP---VASARHKAAGLPA-PEVFVTAERVKRGKPEPDAYLLGAQLLGLAP-QECVVVEDAPAGVL  169 (218)
T ss_pred             HHHcCCcEEEEcCCCch---HHHHHHHhcCCCC-ccEEEEHHHhcCCCCCcHHHHHHHHHcCCCc-ccEEEEecchhhhH
Confidence            78899999999997643   3355677788853 3456655332         112223334433 3455666 333455


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+..+
T Consensus       170 aA~~aG~~~i  179 (218)
T PRK11587        170 SGLAAGCHVI  179 (218)
T ss_pred             HHHHCCCEEE
Confidence            5667777654

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=89.90  E-value=0.46  Score=40.43  Aligned_cols=44  Identities=14%  Similarity=0.160  Sum_probs=37.7

Q ss_pred             cHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccC
Q 025117          178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG  223 (257)
Q Consensus       178 ~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G  223 (257)
                      +-..++.+++.+|+++++++.|||+ ..|+.+=+.+|. ++.+..+
T Consensus       189 Kg~al~~l~~~~gi~~~~v~afGD~-~NDi~Ml~~ag~-~vAm~Na  232 (272)
T PRK15126        189 KGAALAVLSQHLGLSLADCMAFGDA-MNDREMLGSVGR-GFIMGNA  232 (272)
T ss_pred             hHHHHHHHHHHhCCCHHHeEEecCC-HHHHHHHHHcCC-ceeccCC
Confidence            3467889999999999999999999 799999999995 6666654

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=89.77  E-value=0.56  Score=38.60  Aligned_cols=60  Identities=23%  Similarity=0.347  Sum_probs=44.1

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh
Q 025117          179 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD  248 (257)
Q Consensus       179 p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e  248 (257)
                      -...+.+++.+|+++++++.|||+ ..|+.+-+.+|. ++.+..+.   +++.     ..++++.++-.+
T Consensus       188 ~~ai~~l~~~~~i~~~~~~~~GD~-~ND~~Ml~~~~~-~~am~na~---~~~k-----~~a~~i~~~~~~  247 (254)
T PF08282_consen  188 GSAIKYLLEYLGISPEDIIAFGDS-ENDIEMLELAGY-SVAMGNAT---PELK-----KAADYITPSNND  247 (254)
T ss_dssp             HHHHHHHHHHHTTSGGGEEEEESS-GGGHHHHHHSSE-EEEETTS----HHHH-----HHSSEEESSGTC
T ss_pred             HHHHHHHhhhcccccceeEEeecc-cccHhHHhhcCe-EEEEcCCC---HHHH-----HhCCEEecCCCC
Confidence            356678889999999999999999 799999999984 45565432   2333     246677766554

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=89.74  E-value=1.8  Score=35.27  Aligned_cols=76  Identities=21%  Similarity=0.170  Sum_probs=46.1

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCC--CCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT--VTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGI   69 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~--~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~   69 (257)
                      |++.|+++.++||++..   .....|+.+|+.  ---+.|+++..         .....+++.+..+..+++++| +...
T Consensus        99 L~~~g~~~~ivT~~~~~---~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~D  175 (220)
T TIGR03351        99 LRSSGIKVALTTGFDRD---TAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPND  175 (220)
T ss_pred             HHHCCCEEEEEeCCchH---HHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHH
Confidence            67889999999995544   444556667765  22244554422         233334444442235688888 4555


Q ss_pred             HHHHHHcCCee
Q 025117           70 LKELELAGFQY   80 (257)
Q Consensus        70 ~~~l~~~g~~~   80 (257)
                      .+..+.+|+..
T Consensus       176 i~aa~~aG~~~  186 (220)
T TIGR03351       176 LEAGINAGAGA  186 (220)
T ss_pred             HHHHHHCCCCe
Confidence            66677888776

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK06769 hypothetical protein; Validated

Probab=89.69  E-value=2.1  Score=33.94  Aligned_cols=80  Identities=8%  Similarity=0.051  Sum_probs=45.7

Q ss_pred             ChhccCCcEEEEeCCCC-----cCHHHHHHHHHhCCCCC---CCC---ceechHH----HHHHHHHhcCCCCCCEEEEEc
Q 025117            1 MLRSKGKRLVFVTNNST-----KSRKQYGKKFETLGLTV---TEE---EIFASSF----AAAAYLKSIDFPKDKKVYVVG   65 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~-----~~~~~~~~~L~~~G~~~---~~~---~i~ts~~----~~~~~l~~~~~~~~~~v~vlg   65 (257)
                      +|+++|+++.++||++.     .....+.+.|+..|++-   ..+   +-....+    .....+++.+.. ...++++|
T Consensus        39 ~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~-p~~~i~IG  117 (173)
T PRK06769         39 KLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLD-LTQCAVIG  117 (173)
T ss_pred             HHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCC-HHHeEEEc
Confidence            37889999999999764     22234666688888851   100   0001112    334444444442 24577887


Q ss_pred             C-HHHHHHHHHcCCeee
Q 025117           66 E-DGILKELELAGFQYL   81 (257)
Q Consensus        66 ~-~~~~~~l~~~g~~~~   81 (257)
                      - ....+..+.+|+..+
T Consensus       118 D~~~Di~aA~~aGi~~i  134 (173)
T PRK06769        118 DRWTDIVAAAKVNATTI  134 (173)
T ss_pred             CCHHHHHHHHHCCCeEE
Confidence            3 344555677787765

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=89.59  E-value=1.4  Score=34.84  Aligned_cols=75  Identities=16%  Similarity=0.130  Sum_probs=45.2

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHH
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGIL   70 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~   70 (257)
                      +|++.|.++.++||+     ......|+.+|+.--.+.++++..         .....+++.+..+ ..+.++| +....
T Consensus        99 ~l~~~g~~i~i~S~~-----~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~v~IgD~~~di  172 (185)
T TIGR02009        99 RLKKKGIAVGLGSSS-----KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSP-NECVVFEDALAGV  172 (185)
T ss_pred             HHHHcCCeEEEEeCc-----hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCH-HHeEEEeCcHhhH
Confidence            367889999999995     345567888888643456665432         1233344444433 3455566 44555


Q ss_pred             HHHHHcCCeee
Q 025117           71 KELELAGFQYL   81 (257)
Q Consensus        71 ~~l~~~g~~~~   81 (257)
                      +..+.+|+..+
T Consensus       173 ~aA~~~G~~~i  183 (185)
T TIGR02009       173 QAARAAGMFAV  183 (185)
T ss_pred             HHHHHCCCeEe
Confidence            66677777543

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=89.52  E-value=1.3  Score=36.35  Aligned_cols=77  Identities=4%  Similarity=-0.004  Sum_probs=48.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|+++.++||++.   ..+...++++|+.---+.++++..         .....+++.+..+ ..++++| +....+
T Consensus       104 l~~~g~~~~i~S~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~~~~igDs~~Di~  179 (222)
T PRK10826        104 CKAQGLKIGLASASPL---HMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDP-LTCVALEDSFNGMI  179 (222)
T ss_pred             HHHCCCeEEEEeCCcH---HHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCH-HHeEEEcCChhhHH
Confidence            6789999999999653   445556667787644455555422         3444455555532 4567777 345566


Q ss_pred             HHHHcCCeeeC
Q 025117           72 ELELAGFQYLG   82 (257)
Q Consensus        72 ~l~~~g~~~~~   82 (257)
                      ..+.+|+..+.
T Consensus       180 aA~~aG~~~i~  190 (222)
T PRK10826        180 AAKAARMRSIV  190 (222)
T ss_pred             HHHHcCCEEEE
Confidence            77888887654

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=89.47  E-value=1.5  Score=36.80  Aligned_cols=75  Identities=17%  Similarity=0.267  Sum_probs=44.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHh-CCCCCC-C-CceechHH----HHHHHHHhcCCCCCCEEEEEc-CHHHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVT-E-EEIFASSF----AAAAYLKSIDFPKDKKVYVVG-EDGILKEL   73 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~-~G~~~~-~-~~i~ts~~----~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l   73 (257)
                      |+++|.+++|+||.+...++..++.|.+ +|++.. . +.+++...    .-..++++.+     .+.++| +....+..
T Consensus       126 L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~~~l~~~~-----i~I~IGDs~~Di~aA  200 (237)
T PRK11009        126 HVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKTQWLKKKN-----IRIFYGDSDNDITAA  200 (237)
T ss_pred             HHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHHHHHHhcC-----CeEEEcCCHHHHHHH
Confidence            6789999999999765566777788775 999532 2 33443221    1123444332     244455 33455566


Q ss_pred             HHcCCeee
Q 025117           74 ELAGFQYL   81 (257)
Q Consensus        74 ~~~g~~~~   81 (257)
                      +++|++..
T Consensus       201 ~~AGi~~I  208 (237)
T PRK11009        201 REAGARGI  208 (237)
T ss_pred             HHcCCcEE
Confidence            77776543

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=89.40  E-value=0.35  Score=39.86  Aligned_cols=100  Identities=16%  Similarity=0.122  Sum_probs=60.7

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhc-----cCC--CccccCCCcHHHHHHHHHHh
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGS-----TQR--EPLVVGKPSTFMMDYLANKF  189 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~-----~~~--~~~~~gKP~p~~~~~~~~~~  189 (257)
                      -++...+.+..++..+...+|+|.....+. .......|+...+......     +|.  .+...++-+-......++++
T Consensus        78 l~~ga~elv~~lk~~G~~v~iiSgg~~~lv-~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~  156 (212)
T COG0560          78 LTPGAEELVAALKAAGAKVVIISGGFTFLV-EPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAEL  156 (212)
T ss_pred             CCccHHHHHHHHHHCCCEEEEEcCChHHHH-HHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHc
Confidence            345566777778774444566665544331 2222333433222111111     111  11223344567788889999


Q ss_pred             CCCCCcEEEEcCChhhHHHHHHHcCCeEE
Q 025117          190 GIQKSQICMVGDRLDTDILFGQNGGCKTL  218 (257)
Q Consensus       190 ~~~~~~~~~IGD~~~~Di~~A~~aG~~ti  218 (257)
                      |+++++++++||+ ..|+-+=..+|...+
T Consensus       157 g~~~~~~~a~gDs-~nDlpml~~ag~~ia  184 (212)
T COG0560         157 GIPLEETVAYGDS-ANDLPMLEAAGLPIA  184 (212)
T ss_pred             CCCHHHeEEEcCc-hhhHHHHHhCCCCeE
Confidence            9999999999999 699999999997654

>PLN02887 hydrolase family protein

Probab=89.40  E-value=0.61  Score=44.34  Aligned_cols=59  Identities=19%  Similarity=0.217  Sum_probs=45.6

Q ss_pred             cHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECCh
Q 025117          178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI  246 (257)
Q Consensus       178 ~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l  246 (257)
                      +...++.+++.+|+++++++.|||+ ..|+.+=+.+|. ++.+..+.   +.+.     ..++++..+-
T Consensus       508 KG~ALk~L~e~lGI~~eeviAFGDs-~NDIeMLe~AG~-gVAMgNA~---eeVK-----~~Ad~VT~sN  566 (580)
T PLN02887        508 KGNGVKMLLNHLGVSPDEIMAIGDG-ENDIEMLQLASL-GVALSNGA---EKTK-----AVADVIGVSN  566 (580)
T ss_pred             HHHHHHHHHHHcCCCHHHEEEEecc-hhhHHHHHHCCC-EEEeCCCC---HHHH-----HhCCEEeCCC
Confidence            4567889999999999999999999 799999999996 56666543   2333     2567777553

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=89.33  E-value=1.3  Score=37.14  Aligned_cols=75  Identities=16%  Similarity=0.269  Sum_probs=43.8

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHH-hCCCCCCCCceechHHH------HHHHHHhcCCCCCCEEEEEc-CHHHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFE-TLGLTVTEEEIFASSFA------AAAYLKSIDFPKDKKVYVVG-EDGILKEL   73 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~-~~G~~~~~~~i~ts~~~------~~~~l~~~~~~~~~~v~vlg-~~~~~~~l   73 (257)
                      |+++|.++.|+||.+...++..++.|. .+|++--.+.|+++...      -..++++.+     .++++| +.......
T Consensus       126 l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~~~l~~~~-----i~i~vGDs~~DI~aA  200 (237)
T TIGR01672       126 HQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKTQWIQDKN-----IRIHYGDSDNDITAA  200 (237)
T ss_pred             HHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHHHHHHhCC-----CeEEEeCCHHHHHHH
Confidence            678999999999975543556666655 69997433344442210      123454432     245566 33445566


Q ss_pred             HHcCCeee
Q 025117           74 ELAGFQYL   81 (257)
Q Consensus        74 ~~~g~~~~   81 (257)
                      +++|++..
T Consensus       201 k~AGi~~I  208 (237)
T TIGR01672       201 KEAGARGI  208 (237)
T ss_pred             HHCCCCEE
Confidence            67776643

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=89.18  E-value=0.56  Score=38.97  Aligned_cols=39  Identities=13%  Similarity=0.146  Sum_probs=30.1

Q ss_pred             CCCcHHHHHHHHHHhCC--CCCcEEEEcCChhhHHHHHHHcCCe
Q 025117          175 GKPSTFMMDYLANKFGI--QKSQICMVGDRLDTDILFGQNGGCK  216 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~--~~~~~~~IGD~~~~Di~~A~~aG~~  216 (257)
                      .|+..  .+..++.+++  +++++++|||+ ..|+.+-+.+|+.
T Consensus       181 sK~~a--l~~l~~~~~~~~~~~~~i~~GD~-~nD~~ml~~ag~~  221 (225)
T TIGR02461       181 DKGKA--IKRLLDLYKLRPGAIESVGLGDS-ENDFPMFEVVDLA  221 (225)
T ss_pred             CHHHH--HHHHHHHhccccCcccEEEEcCC-HHHHHHHHhCCCc
Confidence            56544  4555566654  77799999999 6999999999974

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=89.16  E-value=2.3  Score=34.59  Aligned_cols=76  Identities=17%  Similarity=0.159  Sum_probs=48.8

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|.++.++||+.   ...+...|+.+|+.---+.|+++.         ......+++.+.. ..+++++| +....+
T Consensus        94 L~~~g~~~~i~S~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~-~~~~~~iGDs~~Di~  169 (214)
T PRK13288         94 LKKQGYKLGIVTTKM---RDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAK-PEEALMVGDNHHDIL  169 (214)
T ss_pred             HHHCCCeEEEEeCCC---HHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCC-HHHEEEECCCHHHHH
Confidence            678899999999955   556667788889874344555431         2233334444443 34567777 445566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+..+
T Consensus       170 aa~~aG~~~i  179 (214)
T PRK13288        170 AGKNAGTKTA  179 (214)
T ss_pred             HHHHCCCeEE
Confidence            6778888765

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=89.03  E-value=1.9  Score=36.15  Aligned_cols=76  Identities=20%  Similarity=0.219  Sum_probs=48.1

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEcC-HHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVGE-DGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg~-~~~~~   71 (257)
                      |+++|+++.++||++   +......|+++|+.---+.|+++..         .....+++.+..+ ..++++|- ....+
T Consensus       120 L~~~g~~l~I~Tn~~---~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~-~~~l~vgDs~~Di~  195 (248)
T PLN02770        120 IEDRGLKRAAVTNAP---RENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSK-DHTFVFEDSVSGIK  195 (248)
T ss_pred             HHHcCCeEEEEeCCC---HHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCCh-hHEEEEcCCHHHHH
Confidence            778999999999954   5566667888888644455665543         2223333444432 45667774 45566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+..+
T Consensus       196 aA~~aGi~~i  205 (248)
T PLN02770        196 AGVAAGMPVV  205 (248)
T ss_pred             HHHHCCCEEE
Confidence            6677887765

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=88.65  E-value=1.8  Score=34.31  Aligned_cols=77  Identities=19%  Similarity=0.223  Sum_probs=50.0

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEc-CHHHHHHHHHcCCe
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVG-EDGILKELELAGFQ   79 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~~   79 (257)
                      .|++.|+++.++||++   .......|..+|+.---+.+-.........+++.+.. ...++++| +....+.++..|+.
T Consensus        45 ~L~~~Gi~laIiT~k~---~~~~~~~l~~lgi~~~f~~~kpkp~~~~~~~~~l~~~-~~ev~~iGD~~nDi~~~~~ag~~  120 (169)
T TIGR02726        45 VLQLCGIDVAIITSKK---SGAVRHRAEELKIKRFHEGIKKKTEPYAQMLEEMNIS-DAEVCYVGDDLVDLSMMKRVGLA  120 (169)
T ss_pred             HHHHCCCEEEEEECCC---cHHHHHHHHHCCCcEEEecCCCCHHHHHHHHHHcCcC-HHHEEEECCCHHHHHHHHHCCCe
Confidence            3788999999999954   4455566777888621122222334566666666542 34688888 44566777888887


Q ss_pred             ee
Q 025117           80 YL   81 (257)
Q Consensus        80 ~~   81 (257)
                      ..
T Consensus       121 ~a  122 (169)
T TIGR02726       121 VA  122 (169)
T ss_pred             EE
Confidence            75

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PLN02580 trehalose-phosphatase

Probab=88.46  E-value=2.1  Score=38.54  Aligned_cols=67  Identities=15%  Similarity=0.106  Sum_probs=47.9

Q ss_pred             HHHHHHHHHHhCCCCCc---EEEEcCChhhHHHHHHHc----CCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHH
Q 025117          179 TFMMDYLANKFGIQKSQ---ICMVGDRLDTDILFGQNG----GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLS  251 (257)
Q Consensus       179 p~~~~~~~~~~~~~~~~---~~~IGD~~~~Di~~A~~a----G~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~  251 (257)
                      -...+.+++.++++..+   .++|||+ .+|..+=+.+    +--+|.|..|..          ...+.|.+++..|+.+
T Consensus       303 G~Av~~Ll~~~g~~~~d~~~pi~iGDD-~TDedmF~~L~~~~~G~~I~Vgn~~~----------~t~A~y~L~dp~eV~~  371 (384)
T PLN02580        303 GKAVEFLLESLGLSNCDDVLPIYIGDD-RTDEDAFKVLREGNRGYGILVSSVPK----------ESNAFYSLRDPSEVME  371 (384)
T ss_pred             HHHHHHHHHhcCCCcccceeEEEECCC-chHHHHHHhhhccCCceEEEEecCCC----------CccceEEcCCHHHHHH
Confidence            46678888999887653   3899999 6999876642    124566654421          1467899999999998


Q ss_pred             HHHhh
Q 025117          252 LKAAA  256 (257)
Q Consensus       252 ~l~~~  256 (257)
                      +|..+
T Consensus       372 ~L~~L  376 (384)
T PLN02580        372 FLKSL  376 (384)
T ss_pred             HHHHH
Confidence            88754

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=88.22  E-value=2.8  Score=34.12  Aligned_cols=77  Identities=23%  Similarity=0.261  Sum_probs=49.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEcCH--HHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVGED--GIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg~~--~~~   70 (257)
                      |+++|+++.++||+..   .....+|+++|+.---+.|+++..         .....+++.+.. ...++++|-.  ...
T Consensus       106 L~~~g~~~~i~Tn~~~---~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~~~~~~igDs~~~di  181 (221)
T TIGR02253       106 LRESGYRLGIITDGLP---VKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVK-PEEAVMVGDRLDKDI  181 (221)
T ss_pred             HHHCCCEEEEEeCCch---HHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCC-hhhEEEECCChHHHH
Confidence            7788999999999653   344566888888643455665422         233444555553 3567888854  356


Q ss_pred             HHHHHcCCeeeC
Q 025117           71 KELELAGFQYLG   82 (257)
Q Consensus        71 ~~l~~~g~~~~~   82 (257)
                      ...+.+|+..+.
T Consensus       182 ~~A~~aG~~~i~  193 (221)
T TIGR02253       182 KGAKNLGMKTVW  193 (221)
T ss_pred             HHHHHCCCEEEE
Confidence            677888987653

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=87.72  E-value=0.33  Score=37.78  Aligned_cols=80  Identities=20%  Similarity=0.207  Sum_probs=53.0

Q ss_pred             HHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccC-CCcHHHHHHHHHHhCCCCCcEEEEcCC
Q 025117          124 GTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVG-KPSTFMMDYLANKFGIQKSQICMVGDR  202 (257)
Q Consensus       124 ~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~g-KP~p~~~~~~~~~~~~~~~~~~~IGD~  202 (257)
                      .+..+.+.+....|.|..+...... ...-+|             .+..+.| +-....|+.+++++++.++++.+|||+
T Consensus        43 Gik~l~~~Gi~vAIITGr~s~ive~-Ra~~LG-------------I~~~~qG~~dK~~a~~~L~~~~~l~~e~~ayiGDD  108 (170)
T COG1778          43 GIKLLLKSGIKVAIITGRDSPIVEK-RAKDLG-------------IKHLYQGISDKLAAFEELLKKLNLDPEEVAYVGDD  108 (170)
T ss_pred             HHHHHHHcCCeEEEEeCCCCHHHHH-HHHHcC-------------CceeeechHhHHHHHHHHHHHhCCCHHHhhhhcCc
Confidence            3445555344477888877643211 112222             2222233 234578999999999999999999999


Q ss_pred             hhhHHHHHHHcCCeEE
Q 025117          203 LDTDILFGQNGGCKTL  218 (257)
Q Consensus       203 ~~~Di~~A~~aG~~ti  218 (257)
                      + .|+..=.+.|+..+
T Consensus       109 ~-~Dlpvm~~vGls~a  123 (170)
T COG1778         109 L-VDLPVMEKVGLSVA  123 (170)
T ss_pred             c-ccHHHHHHcCCccc
Confidence            5 99999999997643

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=87.45  E-value=2.8  Score=35.64  Aligned_cols=76  Identities=9%  Similarity=0.156  Sum_probs=46.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|+++.++||++.   ..+...|+.+|+.---+.|+++..         .....+++.+..+ ..++++| +....+
T Consensus       121 L~~~g~~l~I~Tn~~~---~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p-~~~l~IgDs~~Di~  196 (260)
T PLN03243        121 LKKHEIPIAVASTRPR---RYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIP-ERCIVFGNSNSSVE  196 (260)
T ss_pred             HHHCCCEEEEEeCcCH---HHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCCh-HHeEEEcCCHHHHH
Confidence            7789999999999553   455566777887543445555432         1233344445433 4466676 455566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+..+
T Consensus       197 aA~~aG~~~i  206 (260)
T PLN03243        197 AAHDGCMKCV  206 (260)
T ss_pred             HHHHcCCEEE
Confidence            6777887654

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=87.31  E-value=2  Score=34.59  Aligned_cols=74  Identities=19%  Similarity=0.227  Sum_probs=44.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEcCH--HHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVGED--GIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg~~--~~~   70 (257)
                      |+++|+++.++||++.    .+...|+++|+.---+.|++|..         .....+++.+.. ..+++++|-.  ...
T Consensus       117 L~~~g~~~~i~Sn~~~----~~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-~~~~~~IgD~~~~Di  191 (203)
T TIGR02252       117 LRERGLILGVISNFDS----RLRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGIS-PEEALHIGDSLRNDY  191 (203)
T ss_pred             HHHCCCEEEEEeCCch----hHHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCC-hhHEEEECCCchHHH
Confidence            6788999999999542    24567888898644456665432         122233344442 3457777753  245


Q ss_pred             HHHHHcCCee
Q 025117           71 KELELAGFQY   80 (257)
Q Consensus        71 ~~l~~~g~~~   80 (257)
                      +..+.+|+..
T Consensus       192 ~~A~~aG~~~  201 (203)
T TIGR02252       192 QGARAAGWRA  201 (203)
T ss_pred             HHHHHcCCee
Confidence            5566777654

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=87.28  E-value=3.3  Score=34.70  Aligned_cols=77  Identities=16%  Similarity=0.047  Sum_probs=43.8

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCC-CCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT-EEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~-~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~   70 (257)
                      |+++|+++.++||++   .+.....|+++|+.-- .+.|+++..         .....+++.+......++++| +....
T Consensus       111 L~~~g~~l~IvT~~~---~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di  187 (253)
T TIGR01422       111 LRARGIKIGSTTGYT---REMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDI  187 (253)
T ss_pred             HHHCCCeEEEECCCc---HHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHH
Confidence            678899999999955   3444455566665422 244555432         233334444442124577777 33455


Q ss_pred             HHHHHcCCeee
Q 025117           71 KELELAGFQYL   81 (257)
Q Consensus        71 ~~l~~~g~~~~   81 (257)
                      +..+.+|+..+
T Consensus       188 ~aA~~aGi~~i  198 (253)
T TIGR01422       188 EEGRNAGMWTV  198 (253)
T ss_pred             HHHHHCCCeEE
Confidence            56677787654

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=87.18  E-value=11  Score=33.75  Aligned_cols=78  Identities=23%  Similarity=0.353  Sum_probs=45.3

Q ss_pred             ChhccCCcEEEEeCCCCc------------CHHHHHHHHHhCCCCCCCCcee-c------------h-HHHHHHHHHhcC
Q 025117            1 MLRSKGKRLVFVTNNSTK------------SRKQYGKKFETLGLTVTEEEIF-A------------S-SFAAAAYLKSID   54 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~------------~~~~~~~~L~~~G~~~~~~~i~-t------------s-~~~~~~~l~~~~   54 (257)
                      .|+++|+++.++||+++.            ......+.|+.+|+..  +.|+ +            + ......++++.+
T Consensus        41 ~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f--d~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~  118 (354)
T PRK05446         41 KLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF--DEVLICPHFPEDNCSCRKPKTGLVEEYLAEGA  118 (354)
T ss_pred             HHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce--eeEEEeCCcCcccCCCCCCCHHHHHHHHHHcC
Confidence            378899999999996421            2334455678888863  3332 1            1 123334444444


Q ss_pred             CCCCCEEEEEcC-HHHHHHHHHcCCeee
Q 025117           55 FPKDKKVYVVGE-DGILKELELAGFQYL   81 (257)
Q Consensus        55 ~~~~~~v~vlg~-~~~~~~l~~~g~~~~   81 (257)
                      .. ..+++++|- ....+..+.+|++.+
T Consensus       119 v~-~~~svmIGDs~sDi~aAk~aGi~~I  145 (354)
T PRK05446        119 ID-LANSYVIGDRETDVQLAENMGIKGI  145 (354)
T ss_pred             CC-cccEEEEcCCHHHHHHHHHCCCeEE
Confidence            42 356777774 344555667776654

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=87.17  E-value=5.6  Score=31.39  Aligned_cols=77  Identities=18%  Similarity=0.167  Sum_probs=44.2

Q ss_pred             ChhccCCcEEEEeCCCCc-----CH-------HHHHHHHHhCCCCCCCCceec--------------------hHHHHHH
Q 025117            1 MLRSKGKRLVFVTNNSTK-----SR-------KQYGKKFETLGLTVTEEEIFA--------------------SSFAAAA   48 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~-----~~-------~~~~~~L~~~G~~~~~~~i~t--------------------s~~~~~~   48 (257)
                      .|+++|+++.++||++..     +.       +.+...|.++|+.+  +.++.                    .......
T Consensus        37 ~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~  114 (176)
T TIGR00213        37 ELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL--DGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQ  114 (176)
T ss_pred             HHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc--cEEEECCCCCcccccccCCCCCCCCCHHHHHH
Confidence            378899999999998752     21       23334466666652  22221                    1223334


Q ss_pred             HHHhcCCCCCCEEEEEc-CHHHHHHHHHcCCee
Q 025117           49 YLKSIDFPKDKKVYVVG-EDGILKELELAGFQY   80 (257)
Q Consensus        49 ~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~~~   80 (257)
                      .+++.+..+ ..++++| +....+..+.+|+..
T Consensus       115 a~~~~~~~~-~~~v~VGDs~~Di~aA~~aG~~~  146 (176)
T TIGR00213       115 ARKELHIDM-AQSYMVGDKLEDMQAGVAAKVKT  146 (176)
T ss_pred             HHHHcCcCh-hhEEEEcCCHHHHHHHHHCCCcE
Confidence            445555433 4566777 445566677888865

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=87.16  E-value=4  Score=32.98  Aligned_cols=76  Identities=22%  Similarity=0.225  Sum_probs=47.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|.++.++||++   .......|+++|+.--.+.++++.         ......+++.+..+ ..++++| +....+
T Consensus        97 l~~~g~~~~i~S~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~-~~~~~igDs~~d~~  172 (213)
T TIGR01449        97 LRAKGLRLGLVTNKP---TPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAP-QQMVYVGDSRVDIQ  172 (213)
T ss_pred             HHHCCCeEEEEeCCC---HHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCCh-hHeEEeCCCHHHHH
Confidence            678899999999954   345566677788753334454432         23344455555433 4466777 445566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+...
T Consensus       173 aa~~aG~~~i  182 (213)
T TIGR01449       173 AARAAGCPSV  182 (213)
T ss_pred             HHHHCCCeEE
Confidence            7788898765

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=87.11  E-value=6.3  Score=31.19  Aligned_cols=78  Identities=18%  Similarity=0.157  Sum_probs=44.6

Q ss_pred             ChhccCCcEEEEeCCCCc-----CH-------HHHHHHHHhCCCCCCCCceech--------------HHHHHHHHHhcC
Q 025117            1 MLRSKGKRLVFVTNNSTK-----SR-------KQYGKKFETLGLTVTEEEIFAS--------------SFAAAAYLKSID   54 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~-----~~-------~~~~~~L~~~G~~~~~~~i~ts--------------~~~~~~~l~~~~   54 (257)
                      .|+++|+++.++||++..     ..       +.+...|+++|+.  -+.++++              .......+++.+
T Consensus        40 ~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~  117 (181)
T PRK08942         40 RLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR--LDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLN  117 (181)
T ss_pred             HHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc--cceEEECCCCCCCCCcCCCCCHHHHHHHHHHcC
Confidence            378899999999997641     11       2334456677864  2233321              122333344445


Q ss_pred             CCCCCEEEEEc-CHHHHHHHHHcCCeee
Q 025117           55 FPKDKKVYVVG-EDGILKELELAGFQYL   81 (257)
Q Consensus        55 ~~~~~~v~vlg-~~~~~~~l~~~g~~~~   81 (257)
                      .. ...++++| +.......+.+|+...
T Consensus       118 ~~-~~~~~~VgDs~~Di~~A~~aG~~~i  144 (181)
T PRK08942        118 ID-LAGSPMVGDSLRDLQAAAAAGVTPV  144 (181)
T ss_pred             CC-hhhEEEEeCCHHHHHHHHHCCCeEE
Confidence            43 34677787 3445566677887654

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=86.83  E-value=2.4  Score=42.37  Aligned_cols=64  Identities=13%  Similarity=0.146  Sum_probs=45.6

Q ss_pred             HHHHHHHH---HhCCCCCcEEEEcCChhhHHHHHHHcC-------------CeEEEEccCCCChhhhcCCCCCCCCcEEE
Q 025117          180 FMMDYLAN---KFGIQKSQICMVGDRLDTDILFGQNGG-------------CKTLLVLSGVTSLSMLQSPNNSIQPDFYT  243 (257)
Q Consensus       180 ~~~~~~~~---~~~~~~~~~~~IGD~~~~Di~~A~~aG-------------~~ti~V~~G~~~~~~~~~~~~~~~pd~~~  243 (257)
                      ...+.+++   .+|.+++.+++|||+ .+|..+=+.++             .-+|.|..+            ...+.|++
T Consensus       765 ~Al~~Ll~~~~~~g~~~d~vl~~GDD-~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~------------~S~A~y~L  831 (854)
T PLN02205        765 LVAKRLLSIMQERGMLPDFVLCIGDD-RSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK------------PSKAKYYL  831 (854)
T ss_pred             HHHHHHHHHHHhcCCCcccEEEEcCC-ccHHHHHHHhhhhccCCcccccccceeEEECCC------------CccCeEec
Confidence            44555543   468899999999999 69998766654             234444322            13678999


Q ss_pred             CChhhHHHHHHhh
Q 025117          244 NKISDFLSLKAAA  256 (257)
Q Consensus       244 ~~l~el~~~l~~~  256 (257)
                      ++..|+.++|+.+
T Consensus       832 ~d~~eV~~lL~~L  844 (854)
T PLN02205        832 DDTAEIVRLMQGL  844 (854)
T ss_pred             CCHHHHHHHHHHH
Confidence            9999999998764

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=86.79  E-value=4  Score=35.10  Aligned_cols=32  Identities=6%  Similarity=0.140  Sum_probs=28.2

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCC
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT   33 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~   33 (257)
                      |++.|++++++||.+....+.+.+.|...|+.
T Consensus       199 l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~  230 (300)
T PHA02530        199 YKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIW  230 (300)
T ss_pred             HHhCCCEEEEEeCCChhhHHHHHHHHHHcCCc
Confidence            67889999999999999999999999888743

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=86.36  E-value=3.1  Score=32.83  Aligned_cols=74  Identities=26%  Similarity=0.351  Sum_probs=48.1

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCC-CCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHH--cCC
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV-TEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELEL--AGF   78 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~-~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~--~g~   78 (257)
                      |+++|.+++++|||+   ++.++...+++|++. .. --=-++.+....|++.+++ .+.|.++|-.-+-+.|-.  .|+
T Consensus        58 ~k~~gi~v~vvSNn~---e~RV~~~~~~l~v~fi~~-A~KP~~~~fr~Al~~m~l~-~~~vvmVGDqL~TDVlggnr~G~  132 (175)
T COG2179          58 LKEAGIKVVVVSNNK---ESRVARAAEKLGVPFIYR-AKKPFGRAFRRALKEMNLP-PEEVVMVGDQLFTDVLGGNRAGM  132 (175)
T ss_pred             HHhcCCEEEEEeCCC---HHHHHhhhhhcCCceeec-ccCccHHHHHHHHHHcCCC-hhHEEEEcchhhhhhhcccccCc
Confidence            678999999999966   344555566788872 11 0012345677788877664 356888888777777643  355


Q ss_pred             ee
Q 025117           79 QY   80 (257)
Q Consensus        79 ~~   80 (257)
                      ..
T Consensus       133 ~t  134 (175)
T COG2179         133 RT  134 (175)
T ss_pred             EE
Confidence            44

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=86.30  E-value=6  Score=32.51  Aligned_cols=76  Identities=21%  Similarity=0.274  Sum_probs=46.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceec---------hHHHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFA---------SSFAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~t---------s~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|.++.++||++   ......-|+.+|+.---+.|++         ........+.+.+.. ..+++++| +....+
T Consensus       101 L~~~g~~l~i~T~k~---~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~-~~~~l~VGDs~~Di~  176 (220)
T COG0546         101 LKSAGYKLGIVTNKP---ERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLD-PEEALMVGDSLNDIL  176 (220)
T ss_pred             HHhCCCeEEEEeCCc---HHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCC-hhheEEECCCHHHHH
Confidence            788999999999954   4555555666887654444444         112233333444443 24678888 445666


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+..+
T Consensus       177 aA~~Ag~~~v  186 (220)
T COG0546         177 AAKAAGVPAV  186 (220)
T ss_pred             HHHHcCCCEE
Confidence            6778886544

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=86.09  E-value=2.1  Score=35.45  Aligned_cols=76  Identities=20%  Similarity=0.343  Sum_probs=47.0

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHH---------HHHHHHhcCCCCCCEEEEEcC-HHHH
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA---------AAAYLKSIDFPKDKKVYVVGE-DGIL   70 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~---------~~~~l~~~~~~~~~~v~vlg~-~~~~   70 (257)
                      .|+++|+++.++||++   ++.....|+.+|+.---+.|++|...         ....+++.+..+ ..++++|- ..-.
T Consensus       104 ~Lk~~g~~~~i~Tn~~---~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p-~~~l~igDs~~di  179 (224)
T PRK14988        104 ALKASGKRRILLTNAH---PHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKA-ERTLFIDDSEPIL  179 (224)
T ss_pred             HHHhCCCeEEEEeCcC---HHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCCh-HHEEEEcCCHHHH
Confidence            3788999999999954   44555667888875434556544321         223334455533 45667773 3455


Q ss_pred             HHHHHcCCee
Q 025117           71 KELELAGFQY   80 (257)
Q Consensus        71 ~~l~~~g~~~   80 (257)
                      +..+.+|+..
T Consensus       180 ~aA~~aG~~~  189 (224)
T PRK14988        180 DAAAQFGIRY  189 (224)
T ss_pred             HHHHHcCCeE
Confidence            6667889863

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=85.94  E-value=3.7  Score=32.78  Aligned_cols=76  Identities=18%  Similarity=0.217  Sum_probs=46.8

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEc-CHHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVG-EDGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~~~   80 (257)
                      |+++|+++.++||.+   .......++++|+..-....-.-.......+++.+.. ...++++| +......++..|+..
T Consensus        60 L~~~Gi~v~I~T~~~---~~~v~~~l~~lgl~~~f~g~~~k~~~l~~~~~~~gl~-~~ev~~VGDs~~D~~~a~~aG~~~  135 (183)
T PRK09484         60 LLTSGIEVAIITGRK---SKLVEDRMTTLGITHLYQGQSNKLIAFSDLLEKLAIA-PEQVAYIGDDLIDWPVMEKVGLSV  135 (183)
T ss_pred             HHHCCCEEEEEeCCC---cHHHHHHHHHcCCceeecCCCcHHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHHCCCeE
Confidence            567899999999954   3444556677887521111111234555666666553 34577887 445677778888775


Q ss_pred             e
Q 025117           81 L   81 (257)
Q Consensus        81 ~   81 (257)
                      .
T Consensus       136 ~  136 (183)
T PRK09484        136 A  136 (183)
T ss_pred             e
Confidence            3

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=85.93  E-value=4.8  Score=34.07  Aligned_cols=78  Identities=13%  Similarity=0.060  Sum_probs=42.3

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|+++.++||++....+.+.+.+.-.++.  .+.|+++.         ......+++.+..+...++++| +....+
T Consensus       113 L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~--~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~  190 (267)
T PRK13478        113 LRARGIKIGSTTGYTREMMDVVVPLAAAQGYR--PDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIE  190 (267)
T ss_pred             HHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC--ceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHH
Confidence            77889999999996654433333333322321  23444332         2233444444542224577777 334556


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+..+
T Consensus       191 aA~~aG~~~i  200 (267)
T PRK13478        191 EGLNAGMWTV  200 (267)
T ss_pred             HHHHCCCEEE
Confidence            6677787654

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=85.89  E-value=4.3  Score=31.91  Aligned_cols=74  Identities=12%  Similarity=0.171  Sum_probs=45.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHH---------HHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA---------AAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~---------~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|+++.++||+..  .   ...|+++|+.---+.++++...         ....+++.+..+ +++.++| +....+
T Consensus        99 L~~~g~~~~i~s~~~~--~---~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~-~~~v~vgD~~~di~  172 (185)
T TIGR01990        99 LKKNNIKIALASASKN--A---PTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSP-SECIGIEDAQAGIE  172 (185)
T ss_pred             HHHCCCeEEEEeCCcc--H---HHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCH-HHeEEEecCHHHHH
Confidence            7788999999998432  1   2468889987445667765432         233344444432 3466666 444566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|++.+
T Consensus       173 aA~~aG~~~i  182 (185)
T TIGR01990       173 AIKAAGMFAV  182 (185)
T ss_pred             HHHHcCCEEE
Confidence            6677787654

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=85.71  E-value=1.3  Score=37.27  Aligned_cols=43  Identities=26%  Similarity=0.471  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccC
Q 025117          179 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG  223 (257)
Q Consensus       179 p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G  223 (257)
                      -...+++++++++++++++.+||| ..|+.+= ..+..+|.|...
T Consensus       167 ~~Al~~L~~~~~~~~~~vl~aGDS-gND~~mL-~~~~~~vvV~Na  209 (247)
T PF05116_consen  167 GAALRYLMERWGIPPEQVLVAGDS-GNDLEML-EGGDHGVVVGNA  209 (247)
T ss_dssp             HHHHHHHHHHHT--GGGEEEEESS-GGGHHHH-CCSSEEEE-TTS
T ss_pred             HHHHHHHHHHhCCCHHHEEEEeCC-CCcHHHH-cCcCCEEEEcCC
Confidence            367789999999999999999999 6899887 778899988763

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=85.56  E-value=2.7  Score=34.11  Aligned_cols=78  Identities=15%  Similarity=0.219  Sum_probs=40.3

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEcC-HHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVGE-DGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg~-~~~~~   71 (257)
                      |+++|+++.++||++...... ...+...|+.---+.|++|..         .....+++.+..+. .++++|. .....
T Consensus       106 L~~~g~~l~i~Sn~~~~~~~~-~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~-~~l~i~D~~~di~  183 (211)
T TIGR02247       106 LRAKGFKTACITNNFPTDHSA-EEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE-ECVFLDDLGSNLK  183 (211)
T ss_pred             HHHCCCeEEEEeCCCCccchh-hhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH-HeEEEcCCHHHHH
Confidence            788899999999976544222 223334454322345554421         12233334444333 3444553 23445


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+..+
T Consensus       184 aA~~aG~~~i  193 (211)
T TIGR02247       184 PAAALGITTI  193 (211)
T ss_pred             HHHHcCCEEE
Confidence            5566777654

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PLN02382 probable sucrose-phosphatase

Probab=85.46  E-value=1.8  Score=39.43  Aligned_cols=45  Identities=18%  Similarity=0.197  Sum_probs=38.7

Q ss_pred             HHHHHHHHHHh---CCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          179 TFMMDYLANKF---GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       179 p~~~~~~~~~~---~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      -..++++++++   |+++++++.+||+ ..|+.+=+.+|..++.|..+.
T Consensus       177 g~Al~~L~~~~~~~gi~~~~~iafGDs-~NDleMl~~ag~~gvam~NA~  224 (413)
T PLN02382        177 GQALAYLLKKLKAEGKAPVNTLVCGDS-GNDAELFSVPDVYGVMVSNAQ  224 (413)
T ss_pred             HHHHHHHHHHhhhcCCChhcEEEEeCC-HHHHHHHhcCCCCEEEEcCCc
Confidence            35678888888   9999999999999 799999999998888886643

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=85.29  E-value=2.5  Score=41.43  Aligned_cols=65  Identities=12%  Similarity=-0.001  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          179 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       179 p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      -...+.+++  +.+++.++++||+ .+|+.+-+.++-.+..|.-|..          ...++|++++..|+.++|+.+
T Consensus       659 G~al~~ll~--~~~~d~vl~~GD~-~nDe~Mf~~~~~~~~~v~vG~~----------~s~A~~~l~~~~eV~~~L~~l  723 (726)
T PRK14501        659 GRAVRRLLE--AGPYDFVLAIGDD-TTDEDMFRALPETAITVKVGPG----------ESRARYRLPSQREVRELLRRL  723 (726)
T ss_pred             HHHHHHHHh--cCCCCEEEEECCC-CChHHHHHhcccCceEEEECCC----------CCcceEeCCCHHHHHHHHHHH
Confidence            345556665  6788999999999 6999999887533333433431          136789999999988887764

>PRK09449 dUMP phosphatase; Provisional

Probab=84.74  E-value=4.4  Score=33.12  Aligned_cols=76  Identities=20%  Similarity=0.185  Sum_probs=47.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEcCH--HHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVGED--GIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg~~--~~~   70 (257)
                      |+ .|+++.++||++   ++.....|+++|+.---+.|++|..         .....+++.+..+...++++|-.  ...
T Consensus       107 L~-~~~~~~i~Tn~~---~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di  182 (224)
T PRK09449        107 LR-GKVKMGIITNGF---TELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDI  182 (224)
T ss_pred             HH-hCCeEEEEeCCc---HHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHH
Confidence            56 579999999954   3455566888888643455555432         23333444444333568888854  256


Q ss_pred             HHHHHcCCeee
Q 025117           71 KELELAGFQYL   81 (257)
Q Consensus        71 ~~l~~~g~~~~   81 (257)
                      +..+.+|+..+
T Consensus       183 ~~A~~aG~~~i  193 (224)
T PRK09449        183 LGGINAGIDTC  193 (224)
T ss_pred             HHHHHCCCcEE
Confidence            67788898754

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=84.46  E-value=8.5  Score=31.28  Aligned_cols=76  Identities=18%  Similarity=0.248  Sum_probs=47.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceech---------HHHHHHHHHhcCCCCCCEEEEEcC-HHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKKVYVVGE-DGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts---------~~~~~~~l~~~~~~~~~~v~vlg~-~~~~~   71 (257)
                      |++.|+++.++||+..   ......++.+|+.---+.++++         .......+++.+.. .++++++|- ....+
T Consensus       105 l~~~g~~~~i~S~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~~~~i~igD~~~Di~  180 (226)
T PRK13222        105 LKAAGYPLAVVTNKPT---PFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLD-PEEMLFVGDSRNDIQ  180 (226)
T ss_pred             HHHCCCeEEEEeCCCH---HHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCC-hhheEEECCCHHHHH
Confidence            6778999999999653   4445667778875333445543         22334444454443 356778884 45667


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+...
T Consensus       181 ~a~~~g~~~i  190 (226)
T PRK13222        181 AARAAGCPSV  190 (226)
T ss_pred             HHHHCCCcEE
Confidence            7788888654

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=84.22  E-value=12  Score=28.55  Aligned_cols=80  Identities=24%  Similarity=0.253  Sum_probs=45.9

Q ss_pred             ChhccCCcEEEEeCCCCcC------------HHHHHHHHHhCCCCCCC---------Cce--e-chHHHHHHHHHhcCCC
Q 025117            1 MLRSKGKRLVFVTNNSTKS------------RKQYGKKFETLGLTVTE---------EEI--F-ASSFAAAAYLKSIDFP   56 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~------------~~~~~~~L~~~G~~~~~---------~~i--~-ts~~~~~~~l~~~~~~   56 (257)
                      .|+++|+++.++||++...            .+.+...|+.+|+....         ++.  - -........+++.+..
T Consensus        38 ~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~  117 (147)
T TIGR01656        38 TLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVD  117 (147)
T ss_pred             HHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            3788999999999976311            13455667888886210         111  0 1122334444555543


Q ss_pred             CCCEEEEEcC-HHHHHHHHHcCCeee
Q 025117           57 KDKKVYVVGE-DGILKELELAGFQYL   81 (257)
Q Consensus        57 ~~~~v~vlg~-~~~~~~l~~~g~~~~   81 (257)
                       ...++++|- ....+..+.+|++.+
T Consensus       118 -~~e~i~IGDs~~Di~~A~~~Gi~~v  142 (147)
T TIGR01656       118 -ASRSLVVGDRLRDLQAARNAGLAAV  142 (147)
T ss_pred             -hHHEEEEcCCHHHHHHHHHCCCCEE
Confidence             345777875 445566677787654

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=84.04  E-value=5.6  Score=35.86  Aligned_cols=77  Identities=14%  Similarity=0.183  Sum_probs=50.2

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEcC-HHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVGE-DGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg~-~~~~~   71 (257)
                      |++.|+++.++||   .+++.+...|+++|+.---+.|+++..         .....+++.+..+ ..++++|- ....+
T Consensus       228 Lk~~GiklaIaSn---~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~P-eecl~IGDS~~DIe  303 (381)
T PLN02575        228 LMNYKIPMALVST---RPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIP-ERCIVFGNSNQTVE  303 (381)
T ss_pred             HHHCCCeEEEEeC---CCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCc-ccEEEEcCCHHHHH
Confidence            7889999999999   446666777888888644445555433         2233344445433 45667774 45667


Q ss_pred             HHHHcCCeeeC
Q 025117           72 ELELAGFQYLG   82 (257)
Q Consensus        72 ~l~~~g~~~~~   82 (257)
                      ..+.+|+..+.
T Consensus       304 AAk~AGm~~Ig  314 (381)
T PLN02575        304 AAHDARMKCVA  314 (381)
T ss_pred             HHHHcCCEEEE
Confidence            77888887664

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=83.76  E-value=1  Score=37.72  Aligned_cols=81  Identities=16%  Similarity=0.167  Sum_probs=55.1

Q ss_pred             eEEEecCCCccccCCCcccccCchHH--HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHH
Q 025117          135 LFIATNRDAVTHLTDAQEWAGGGSMV--GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQN  212 (257)
Q Consensus       135 ~~i~tn~d~~~~~~~~~~~~~~g~~~--~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~  212 (257)
                      -+++|+...+-... .....+++++|  +-|+++.     .+||.  ..|+.+.+++|-+.-.-+.|||. ..--.+|+.
T Consensus       178 NvLVTs~qLVPaLa-KcLLy~L~~~f~ieNIYSa~-----kvGK~--~cFe~I~~Rfg~p~~~f~~IGDG-~eEe~aAk~  248 (274)
T TIGR01658       178 NVLVTSGQLIPSLA-KCLLFRLDTIFRIENVYSSI-----KVGKL--QCFKWIKERFGHPKVRFCAIGDG-WEECTAAQA  248 (274)
T ss_pred             EEEEEcCccHHHHH-HHHHhccCCccccccccchh-----hcchH--HHHHHHHHHhCCCCceEEEeCCC-hhHHHHHHh
Confidence            45666665532211 22344555554  2222222     23664  89999999999888899999999 577899999


Q ss_pred             cCCeEEEEccCC
Q 025117          213 GGCKTLLVLSGV  224 (257)
Q Consensus       213 aG~~ti~V~~G~  224 (257)
                      .++..+-|....
T Consensus       249 l~wPFw~I~~h~  260 (274)
T TIGR01658       249 MNWPFVKIDLHP  260 (274)
T ss_pred             cCCCeEEeecCC
Confidence            999998887654

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=82.96  E-value=4.4  Score=33.46  Aligned_cols=77  Identities=16%  Similarity=0.115  Sum_probs=45.7

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEcC-HHHH
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVGE-DGIL   70 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg~-~~~~   70 (257)
                      +|++.|+++.++||++.   ......|.++|+.-.-+.|+++..         .....+++.+.. ...++++|- ....
T Consensus       106 ~L~~~g~~l~i~Tn~~~---~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~-p~~~l~IGDs~~Di  181 (229)
T PRK13226        106 RLECAGCVWGIVTNKPE---YLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVA-PTDCVYVGDDERDI  181 (229)
T ss_pred             HHHHCCCeEEEECCCCH---HHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCC-hhhEEEeCCCHHHH
Confidence            37889999999999654   344445777887533333443221         123333444543 355777774 3455


Q ss_pred             HHHHHcCCeee
Q 025117           71 KELELAGFQYL   81 (257)
Q Consensus        71 ~~l~~~g~~~~   81 (257)
                      +..+.+|+..+
T Consensus       182 ~aA~~aG~~~i  192 (229)
T PRK13226        182 LAARAAGMPSV  192 (229)
T ss_pred             HHHHHCCCcEE
Confidence            66677887765

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=82.52  E-value=1.3  Score=35.34  Aligned_cols=44  Identities=23%  Similarity=0.300  Sum_probs=32.1

Q ss_pred             CCcHHHHH--HHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          176 KPSTFMMD--YLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       176 KP~p~~~~--~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      ||.|.-|.  +.+...++    -++-||| ..||.+|+.+|++.|.+++-.
T Consensus       169 k~k~~qy~Kt~~i~~~~~----~IhYGDS-D~Di~AAkeaG~RgIRilRAa  214 (237)
T COG3700         169 KPKPGQYTKTQWIQDKNI----RIHYGDS-DNDITAAKEAGARGIRILRAA  214 (237)
T ss_pred             CCCcccccccHHHHhcCc----eEEecCC-chhhhHHHhcCccceeEEecC
Confidence            56555444  33444443    5789999 899999999999999997643

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=82.19  E-value=4.7  Score=31.73  Aligned_cols=77  Identities=17%  Similarity=0.229  Sum_probs=44.3

Q ss_pred             hhccCCcEEEEeCCCCcC-----H----HHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcC--CCCCCEE
Q 025117            2 LRSKGKRLVFVTNNSTKS-----R----KQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSID--FPKDKKV   61 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~-----~----~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~--~~~~~~v   61 (257)
                      |+++|+++.++||++...     .    +.+...|+.+|++.  +.++++.         ......+++.+  .. ...+
T Consensus        54 Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~-~~~~  130 (166)
T TIGR01664        54 LDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLYRKPMTGMWEYLQSQYNSPIK-MTRS  130 (166)
T ss_pred             HHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCCCCCccHHHHHHHHHcCCCCC-chhc
Confidence            788999999999976531     2    23455678889863  2333221         12223333333  32 2457


Q ss_pred             EEEcCHH---------HHHHHHHcCCeee
Q 025117           62 YVVGEDG---------ILKELELAGFQYL   81 (257)
Q Consensus        62 ~vlg~~~---------~~~~l~~~g~~~~   81 (257)
                      +++|-..         ..+..+.+|+...
T Consensus       131 v~VGD~~~~~~~~~~~Di~aA~~aGi~~~  159 (166)
T TIGR01664       131 FYVGDAAGRKLDFSDADIKFAKNLGLEFK  159 (166)
T ss_pred             EEEECCCCCCCCCchhHHHHHHHCCCCcC
Confidence            7777542         5666677787653

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=81.71  E-value=25  Score=32.56  Aligned_cols=70  Identities=21%  Similarity=0.229  Sum_probs=48.7

Q ss_pred             CCCcCHHHHHHHHH-hCCCCCCCCcee-chHHH-HHHHHHhcCCCCCCEEEE--EcCHHHHHHHHHcCCeeeCCC
Q 025117           15 NSTKSRKQYGKKFE-TLGLTVTEEEIF-ASSFA-AAAYLKSIDFPKDKKVYV--VGEDGILKELELAGFQYLGGP   84 (257)
Q Consensus        15 ~s~~~~~~~~~~L~-~~G~~~~~~~i~-ts~~~-~~~~l~~~~~~~~~~v~v--lg~~~~~~~l~~~g~~~~~~~   84 (257)
                      +-...++.+++.|. ..|+.++++||+ |+|.. +.+.+.+.-..+|.+|.+  -+-.+..+.|+.+|++....+
T Consensus       133 G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp  207 (459)
T COG1167         133 GLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVP  207 (459)
T ss_pred             CcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecC
Confidence            33456788999998 899999998865 66654 334444443446777766  344578899999998887543

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=81.40  E-value=8.2  Score=33.06  Aligned_cols=77  Identities=19%  Similarity=0.237  Sum_probs=45.9

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCC------CCceechHHHHHHHHHhcCCCCCCEEEEEcC-HHHHHHH
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT------EEEIFASSFAAAAYLKSIDFPKDKKVYVVGE-DGILKEL   73 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~------~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~-~~~~~~l   73 (257)
                      +|++.|+++.++||++   .+.+...|+.+|+.-.      .+++..........+++.+..+ ..++++|- ....+..
T Consensus       153 ~L~~~gi~laIvSn~~---~~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p-~~~l~IGDs~~Di~aA  228 (273)
T PRK13225        153 QLRSRSLCLGILSSNS---RQNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQP-AAVMYVGDETRDVEAA  228 (273)
T ss_pred             HHHHCCCeEEEEeCCC---HHHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcCh-hHEEEECCCHHHHHHH
Confidence            3778899999999954   4555666788887522      2222222233344444444433 45777774 3445666


Q ss_pred             HHcCCeee
Q 025117           74 ELAGFQYL   81 (257)
Q Consensus        74 ~~~g~~~~   81 (257)
                      +.+|+..+
T Consensus       229 ~~AG~~~I  236 (273)
T PRK13225        229 RQVGLIAV  236 (273)
T ss_pred             HHCCCeEE
Confidence            77887764

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=81.40  E-value=12  Score=29.58  Aligned_cols=75  Identities=16%  Similarity=0.205  Sum_probs=44.0

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH-------------HHHHHHHhcCCCCCCEEEEEcC-H
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF-------------AAAAYLKSIDFPKDKKVYVVGE-D   67 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~-------------~~~~~l~~~~~~~~~~v~vlg~-~   67 (257)
                      |+...+++.++||++   +......|+.+|+.---+.|+++..             .....+++.+..+ ..++++|- .
T Consensus        93 L~~L~~~~~i~Tn~~---~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~-~~~l~vgD~~  168 (184)
T TIGR01993        93 LLRLPGRKIIFTNGD---RAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDP-ERAIFFDDSA  168 (184)
T ss_pred             HHhCCCCEEEEeCCC---HHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCc-cceEEEeCCH
Confidence            344456899999955   3456677788888533455665432             2233344445433 34566663 3


Q ss_pred             HHHHHHHHcCCee
Q 025117           68 GILKELELAGFQY   80 (257)
Q Consensus        68 ~~~~~l~~~g~~~   80 (257)
                      ...+..+.+|++.
T Consensus       169 ~di~aA~~~G~~~  181 (184)
T TIGR01993       169 RNIAAAKALGMKT  181 (184)
T ss_pred             HHHHHHHHcCCEE
Confidence            4455667777764

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=80.97  E-value=18  Score=29.70  Aligned_cols=56  Identities=18%  Similarity=0.291  Sum_probs=42.2

Q ss_pred             HHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcC------HHHHHHHHHcCCeeeC
Q 025117           20 RKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGE------DGILKELELAGFQYLG   82 (257)
Q Consensus        20 ~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~------~~~~~~l~~~g~~~~~   82 (257)
                      .+++++++++.+    .-.++|++.+..+-|+..+.   +++.++..      ....+.|+..||.++.
T Consensus        87 d~ei~~~ie~~~----~v~vvTts~Avv~aL~al~a---~ri~vlTPY~~evn~~e~ef~~~~Gfeiv~  148 (238)
T COG3473          87 DKEIAQRIEEAK----GVPVVTTSTAVVEALNALGA---QRISVLTPYIDEVNQREIEFLEANGFEIVD  148 (238)
T ss_pred             hHHHHHHHHhcc----CCceeechHHHHHHHHhhCc---ceEEEeccchhhhhhHHHHHHHhCCeEEEE
Confidence            577888888755    33578999999999987754   67777754      2456778889999874

>PLN02940 riboflavin kinase

Probab=80.92  E-value=8.1  Score=34.82  Aligned_cols=78  Identities=15%  Similarity=0.162  Sum_probs=48.7

Q ss_pred             ChhccCCcEEEEeCCCCcCHHHHHHHHH-hCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHH
Q 025117            1 MLRSKGKRLVFVTNNSTKSRKQYGKKFE-TLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGI   69 (257)
Q Consensus         1 ~L~~~g~~~~~lTN~s~~~~~~~~~~L~-~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~   69 (257)
                      +|++.|+++.++||++   +..+...|. ..|+.---+-|+++..         .....+++.+..+ +.++++| +...
T Consensus       104 ~Lk~~g~~l~IvTn~~---~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p-~~~l~VGDs~~D  179 (382)
T PLN02940        104 HLKSHGVPMALASNSP---RANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEP-SNCLVIEDSLPG  179 (382)
T ss_pred             HHHHCCCcEEEEeCCc---HHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCCh-hHEEEEeCCHHH
Confidence            3778999999999964   334445665 5777544455555543         2334444555543 4566777 4455


Q ss_pred             HHHHHHcCCeeeC
Q 025117           70 LKELELAGFQYLG   82 (257)
Q Consensus        70 ~~~l~~~g~~~~~   82 (257)
                      .+..+.+|+..+.
T Consensus       180 i~aA~~aGi~~I~  192 (382)
T PLN02940        180 VMAGKAAGMEVIA  192 (382)
T ss_pred             HHHHHHcCCEEEE
Confidence            6667888988664

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=80.31  E-value=5.1  Score=32.14  Aligned_cols=38  Identities=26%  Similarity=0.214  Sum_probs=27.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceech
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS   42 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts   42 (257)
                      |++.|.++.++||+   +++.....|+.+|+.--.+.++++
T Consensus       118 l~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~f~~~~~~  155 (197)
T TIGR01548       118 LHRAPKGMAVVTGR---PRKDAAKFLTTHGLEILFPVQIWM  155 (197)
T ss_pred             HHHcCCcEEEECCC---CHHHHHHHHHHcCchhhCCEEEee
Confidence            67789999999995   455666778889987434555543

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=80.20  E-value=1.9  Score=36.33  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=35.8

Q ss_pred             cHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccC
Q 025117          178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG  223 (257)
Q Consensus       178 ~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G  223 (257)
                      +-...+.+++.+|+++++++.+||+ ..|+.+=+.+|. ++.+..+
T Consensus       190 K~~al~~l~~~lgi~~~~v~afGD~-~ND~~Ml~~ag~-gvam~Na  233 (264)
T COG0561         190 KGYALQRLAKLLGIKLEEVIAFGDS-TNDIEMLEVAGL-GVAMGNA  233 (264)
T ss_pred             hHHHHHHHHHHhCCCHHHeEEeCCc-cccHHHHHhcCe-eeeccCC
Confidence            3467788899999999999999999 799999998884 4445444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	257
2cfs_A	298	Crystal Structure Of Human Pyridoxal 5'-Phosphate P		1e-28
2cfr_A	298	Crystal Structure Of Human Pyridoxal 5'-Phosphate P		4e-27
2oyc_A	306	Crystal Structure Of Human Pyridoxal Phosphate Phos		4e-27
1zjj_A	263	Crystal Structure Of Hypothetical Protein Ph1952 Fr		2e-22
3pdw_A	266	Crystal Structure Of Putative P-Nitrophenyl Phospha		9e-22
3qgm_A	268	P-Nitrophenyl Phosphatase From Archaeoglobus Fulgid		7e-20
1yv9_A	264	Crystal Structure Of A Had-Like Phosphatase From En		3e-19
3epr_A	264	Crystal Structure Of Putative Had Superfamily Hydro		7e-17
1vjr_A	271	Crystal Structure Of 4-nitrophenylphosphatase (tm17		8e-16
1wvi_A	257	Crystal Structure Of Putative Phosphatase From Stre		9e-16
1pw5_A	253	Putative Nagd Protein Length = 253		9e-16
1ys9_A	254	Crystal Sructure Of Phosphatase Spy1043 From Strept		6e-15
1ydf_A	257	Crystal Structure Of A Had-like Phosphatase From St		2e-14
2c4n_A	250	Nagd From E.Coli K-12 Strain Length = 250		5e-13
2hx1_A	284	Crystal Structure Of Possible Sugar Phosphatase, Ha		1e-05
2w4m_A	270	The Crystal Structure Of Human N-Acetylneuraminic A		1e-04

>pdb|2CFS|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate Phosphatase Length = 298

Iteration: 1
 Score =  123 bits (308), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 20/256 (7%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIXXXXXXXXXYLKS-IDFPKDK 59
           L   GK  +FV+NNS ++R +   +F  LG   +  E++          L+  +  P D 
Sbjct: 49  LARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDA 108
Query: 60  --KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFN 117
              V+V+G +G+  EL  AG +  G P  G                 V AV+VG+D +F+
Sbjct: 109 PGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAA-----------PRVRAVLVGYDEHFS 157
Query: 118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKP 177
           + K++     +R +P CL +AT+RD    L+D     G GS+  A   ++ R+ LVVGKP
Sbjct: 158 FAKLREACAHLR-DPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKP 216
Query: 178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQ----SP 233
           S +M + +   F I  ++  MVGDRL+TDILFG   G                Q    + 
Sbjct: 217 SPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAG 276
Query: 234 NNSIQPDFYTNKISDF 249
            + + P +Y   I+D 
Sbjct: 277 QHDLVPHYYVESIADL 292

>pdb|2CFR|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate Phosphatase Length = 298

Iteration: 1
 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 119/256 (46%), Gaps = 20/256 (7%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIXXXXXXXXXYLKS-IDFPKDK 59
           L   GK  +FV+NNS ++R +   +F  LG   +  E++          L+  +  P D 
Sbjct: 49  LARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDA 108
Query: 60  --KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFN 117
              V+V+G +G+  EL  AG +  G P  G                 V AV+VG+D +F+
Sbjct: 109 PGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAA-----------PRVRAVLVGYDEHFS 157
Query: 118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKP 177
           + K++     +R +P CL +AT+RD    L+D     G GS+  A   ++ R+ LVVGKP
Sbjct: 158 FAKLREACAHLR-DPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKP 216
Query: 178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQ----SP 233
           S +  + +   F I  ++   VGDRL+TDILFG   G                Q    + 
Sbjct: 217 SPYXFECITENFSIDPARTLXVGDRLETDILFGHRCGXTTVLTLTGVSRLEEAQAYLAAG 276
Query: 234 NNSIQPDFYTNKISDF 249
            + + P +Y   I+D 
Sbjct: 277 QHDLVPHYYVESIADL 292

>pdb|2OYC|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase Length = 306

Iteration: 1
 Score =  117 bits (294), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 119/256 (46%), Gaps = 20/256 (7%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIXXXXXXXXXYLKS-IDFPKDK 59
           L   GK  +FV+NNS ++R +   +F  LG   +  E++          L+  +  P D 
Sbjct: 49  LARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDA 108
Query: 60  --KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFN 117
              V+V+G +G+  EL  AG +  G P  G                 V AV+VG+D +F+
Sbjct: 109 PGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAA-----------PRVRAVLVGYDEHFS 157
Query: 118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKP 177
           + K++     +R +P CL +AT+RD    L+D     G GS+  A   ++ R+ LVVGKP
Sbjct: 158 FAKLREACAHLR-DPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKP 216
Query: 178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQ----SP 233
           S +  + +   F I  ++   VGDRL+TDILFG   G                Q    + 
Sbjct: 217 SPYXFECITENFSIDPARTLXVGDRLETDILFGHRCGXTTVLTLTGVSRLEEAQAYLAAG 276
Query: 234 NNSIQPDFYTNKISDF 249
            + + P +Y   I+D 
Sbjct: 277 QHDLVPHYYVESIADL 292

>pdb|1ZJJ|A Chain A, Crystal Structure Of Hypothetical Protein Ph1952 From Pyrococcus Horikoshii Ot3 Length = 263

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 20/216 (9%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYL-KSIDFPKDKK 60
           L+ +G    F+TNNSTK+ + Y +K   +G+ V+   I         Y+ K +D     K
Sbjct: 29  LKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATRLYMSKHLD---PGK 85
Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           ++V+G +G++KE++  G+  +          E + G      K+V  VVVG D    Y K
Sbjct: 86  IFVIGGEGLVKEMQALGWGIV-------TLDEARQG----SWKEVKHVVVGLDPDLTYEK 134
Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           ++Y TL IR   G  FI TN DA T   +   + G GS++ A   +T  EP+++GKP+  
Sbjct: 135 LKYATLAIRN--GATFIGTNPDA-TLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEP 191
Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK 216
           M + +   F     ++ MVGDRLDTDI F +  G K
Sbjct: 192 MYEVVREMF--PGEELWMVGDRLDTDIAFAKKFGMK 225

>pdb|3PDW|A Chain A, Crystal Structure Of Putative P-Nitrophenyl Phosphatase From Bacillus Subtilis Length = 266

Iteration: 1
 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 25/213 (11%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSIDFPKDKKV 61
           L+ +G   +FVTNNS+++ KQ   K  +  +  TEE++         ++      KD  V
Sbjct: 34  LKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATAQHIAQ--QKKDASV 91
Query: 62  YVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKV 121
           YV+GE+GI + +E  G  +      GG+  +               VVVG DR   Y K 
Sbjct: 92  YVIGEEGIRQAIEENGLTF------GGENADF--------------VVVGIDRSITYEKF 131
Query: 122 QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFM 181
             G L IR   G  FI+TN D +   T+     G GS+      ST  +P+ +GKP + +
Sbjct: 132 AVGCLAIRN--GARFISTNGD-IAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESII 188
Query: 182 MDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 214
           M+      G   S+  MVGD   TDI+ G N G
Sbjct: 189 MEQAMRVLGTDVSETLMVGDNYATDIMAGINAG 221

>pdb|3QGM|A Chain A, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus Length = 268

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 29/251 (11%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSIDFPKDKKV 61
           L+  GK+++FV+NNST+SR+   ++  + GL V E+EI         ++   + P + KV
Sbjct: 36  LKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYATARFIAR-EKP-NAKV 93
Query: 62  YVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNY-YK 120
           +  GE+G+++EL LAG +                  ++++D +   +VVG +R  N+   
Sbjct: 94  FTTGEEGLIEELRLAGLE------------------IVDYD-EAEYLVVGSNRKINFELX 134
Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP-LVVGKPST 179
            +    C+R   G  +IATN D +    D     G G ++GA    T REP +VVGKPS 
Sbjct: 135 TKALRACLR---GIRYIATNPDRIFPAEDGP-IPGTGXIIGALYWXTGREPDVVVGKPSE 190
Query: 180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQS--PNNSI 237
            +     +  G+    + +VGD++D D+  G+  G +                    + +
Sbjct: 191 VIXREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQXIERHGL 250
Query: 238 QPDFYTNKISD 248
           +PD+  N + D
Sbjct: 251 KPDYVFNSLKD 261

>pdb|1YV9|A Chain A, Crystal Structure Of A Had-Like Phosphatase From Enterococcus Faecalis V583 Length = 264

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIXXXXXXXXXYLKSIDFPKDKK 60
           L+ K    +FVTNN+TKS +   ++      + V    +         Y+K  +  + KK
Sbjct: 33  LQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLATIDYMKEAN--RGKK 90
Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           V+V+GE G++  +  AGF++           E  P +          VVVG D   +Y K
Sbjct: 91  VFVIGEAGLIDLILEAGFEW----------DETNPDY----------VVVGLDTELSYEK 130
Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           V   TL I++  G LFI TN D     T+     G GS+V     +TQ +P+ +GKP   
Sbjct: 131 VVLATLAIQK--GALFIGTNPDKNIP-TERGLLPGAGSVVTFVETATQTKPVYIGKPKAI 187
Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFG-QNG 213
           +M+      G++K Q+ MVGD  +TDI  G QNG
Sbjct: 188 IMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNG 221

>pdb|3EPR|A Chain A, Crystal Structure Of Putative Had Superfamily Hydrolase From Streptococcus Agalactiae Length = 264

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 104/248 (41%), Gaps = 27/248 (10%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSIDFPKDKKV 61
           L+ KG   + VTNN+T++ +   +      +    E I         Y+   D  + K  
Sbjct: 33  LQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMN--DMNRGKTA 90
Query: 62  YVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKV 121
           YV+GE+G+ K +  AG+                    +E  K+   VVVG D    Y K+
Sbjct: 91  YVIGEEGLKKAIADAGY--------------------VEDTKNPAYVVVGLDWNVTYDKL 130
Query: 122 QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFM 181
              TL I+   G LFI TN D +   T+     G GS+      +T+ +P+ +GKP+  +
Sbjct: 131 ATATLAIQN--GALFIGTNPD-LNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAII 187
Query: 182 MDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQSPNNSIQPDF 241
           M+       I ++Q  MVGD   TDI+ G N                  + P+  IQP +
Sbjct: 188 MNKALEILNIPRNQAVMVGDNYLTDIMAGINNDID--TLLVTTGFTTVEEVPDLPIQPSY 245
Query: 242 YTNKISDF 249
               + ++
Sbjct: 246 VLASLDEW 253

>pdb|1VJR|A Chain A, Crystal Structure Of 4-nitrophenylphosphatase (tm1742) From Thermotoga Maritima At 2.40 A Resolution Length = 271

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSIDFPKDKKV 61
           L+ K KR VF TNNS+   + Y +K    G                     +D P D  V
Sbjct: 45  LKEKNKRFVFFTNNSSLGAQDYVRKLRNXG---------------------VDVPDDAVV 83
Query: 62  YV--VGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY 119
               +  +  LK         LG P+   KK+    G +++ +++   VV+GFD+   Y 
Sbjct: 84  TSGEITAEHXLKRFGRCRIFLLGTPQ--LKKVFEAYGHVID-EENPDFVVLGFDKTLTYE 140
Query: 120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP-LVVGKPS 178
           +++   + +R+  G  +IAT+ D +   +        GS+  A   ST R+P L+ GKP+
Sbjct: 141 RLKKACILLRK--GKFYIATHPD-INCPSKEGPVPDAGSIXAAIEASTGRKPDLIAGKPN 197
Query: 179 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 214
             ++D ++ KFG+ K +   VGDRL TD+  G+N G
Sbjct: 198 PLVVDVISEKFGVPKERXAXVGDRLYTDVKLGKNAG 233

>pdb|1WVI|A Chain A, Crystal Structure Of Putative Phosphatase From Streptococcus Mutans Ua159 Length = 257

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 28/241 (11%)
Query: 10  VFVTNNSTKSRKQYGKKFET-LGLTVTEEEIXXXXXXXXXYLKSIDFPKDKKVYVVGEDG 68
           + VTNN+T++ +   +   T   +    E I         Y+   D  + K  YV+GE G
Sbjct: 39  ILVTNNTTRTPEMVQEMLATSFNIKTPLETIYTATLATIDYMN--DMKRGKTAYVIGETG 96
Query: 69  ILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCI 128
           + K +  AG++                    E  ++   VVVG D    Y K+   TL I
Sbjct: 97  LKKAVAEAGYR--------------------EDSENPAYVVVGLDTNLTYEKLTLATLAI 136
Query: 129 RENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANK 188
           ++  G +FI TN D +   T+     G G+++     +T+ +P+++GKP   +M+   ++
Sbjct: 137 QK--GAVFIGTNPD-LNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDR 193
Query: 189 FGIQKSQICMVGDRLDTDILFGQNGGCKXXXXXXXXXXXXXXQSPNNSIQPDFYTNKISD 248
            G+++ +  MVGD   TDI  G                    + P   IQPDF  + +++
Sbjct: 194 LGVKRHEAIMVGDNYLTDITAGIKNDI--ATLLVTTGFTKPEEVPALPIQPDFVLSSLAE 251
Query: 249 F 249
           +
Sbjct: 252 W 252

>pdb|1PW5|A Chain A, Putative Nagd Protein Length = 253

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSIDFPKDKKV 61
           L+ K KR VF TNNS+   + Y +K    G+ V ++ +                      
Sbjct: 33  LKEKNKRFVFFTNNSSLGAQDYVRKLRNXGVDVPDDAVVTSGE----------------- 75
Query: 62  YVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKV 121
             +  +  LK         LG P+   KK+    G +++ +++   VV+GFD+   Y ++
Sbjct: 76  --ITAEHXLKRFGRCRIFLLGTPQ--LKKVFEAYGHVID-EENPDFVVLGFDKTLTYERL 130
Query: 122 QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP-LVVGKPSTF 180
           +   + +R+  G  +IAT+ D +   +        GS+  A   ST R+P L+ GKP+  
Sbjct: 131 KKACILLRK--GKFYIATHPD-INCPSKEGPVPDAGSIXAAIEASTGRKPDLIAGKPNPL 187
Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 214
           ++D ++ KFG+ K +   VGDRL TD+  G+N G
Sbjct: 188 VVDVISEKFGVPKERXAXVGDRLYTDVKLGKNAG 221

>pdb|1YS9|A Chain A, Crystal Sructure Of Phosphatase Spy1043 From Streptococcus Pyogenes Length = 254

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 30/250 (12%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIXXXXXXXXXYLKSIDFPKDKK 60
           L+ +G   + VTNN+T++ +           +  + E I         Y+   D  + K 
Sbjct: 31  LQERGIPYLLVTNNTTRTPEMVQSMLANQFHVETSIETIYTATMATVDYMN--DMNRGKT 88
Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
            YV+GE G+   +  AG+                    +E  ++   VVVG D    Y  
Sbjct: 89  AYVIGETGLKSAIAAAGY--------------------VEELENPAYVVVGLDSQVTYEM 128
Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           +   TL I++  G LFI TN D +   T+     G G++      +T+ +P+ +GKP+  
Sbjct: 129 LAIATLAIQK--GALFIGTNPD-LNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAI 185
Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFG-QNGGCKXXXXXXXXXXXXXXQSPNNSIQP 239
           +M+      GIQ+S+  MVGD   TDI+ G QN                  + P   IQP
Sbjct: 186 IMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQN---DIATILVTTGFTRPEEVPTLPIQP 242
Query: 240 DFYTNKISDF 249
           D   + + ++
Sbjct: 243 DHVLSSLDEW 252

>pdb|1YDF|A Chain A, Crystal Structure Of A Had-like Phosphatase From Streptococcus Pneumoniae Length = 257

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEEEIXXXXXXXXXYLKSIDFPKDKK 60
           L+ +    +FVTNN+T++ +   +   +   +      +         Y+   D   +K 
Sbjct: 31  LQKRDIPYLFVTNNTTRTPESVKEMLAQNFNIDTPLSTVYTATLATIDYMN--DLGLEKT 88
Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYVVGE G+ + ++ AG+      ED     + KP +          VVVG D   +Y K
Sbjct: 89  VYVVGEAGLKEAIKAAGYV-----ED-----KEKPAY----------VVVGLDWQVDYEK 128
Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
               TL I++  G  FI TN D +   T+     G GS++     +T+ +P+ +GKP+  
Sbjct: 129 FATATLAIQK--GAHFIGTNPD-LNIPTERGLLPGAGSLITLLEVATRVKPVYIGKPNAI 185
Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGC 215
           +MD      G+++ ++ MVGD   TDI  G + G 
Sbjct: 186 IMDKAVEHLGLEREELIMVGDNYLTDIRAGIDNGI 220

>pdb|2C4N|A Chain A, Nagd From E.Coli K-12 Strain Length = 250

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 29/215 (13%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIXXXXXXXXXYLKSIDFPKDKKV 61
           +  KG  LV +TN  +++ +    +F T G+ V +            +L+     + KK 
Sbjct: 31  IMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRR---QEGKKA 87
Query: 62  YVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKV 121
           YVVGE  ++ EL  AGF             ++ P F          V+VG  R +N+  +
Sbjct: 88  YVVGEGALIHELYKAGFTI----------TDVNPDF----------VIVGETRSYNWDMM 127
Query: 122 QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFM 181
                 +    G  FIATN D  TH      +   G++       + R+P  VGKPS ++
Sbjct: 128 HKAAYFVAN--GARFIATNPD--TH--GRGFYPACGALCAGIEKISGRKPFYVGKPSPWI 181
Query: 182 MDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK 216
           +    NK      +  +VGD L TDIL G   G +
Sbjct: 182 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLE 216

>pdb|2HX1|A Chain A, Crystal Structure Of Possible Sugar Phosphatase, Had Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii Atcc 33406 At 2.10 A Resolution Length = 284

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 20/219 (9%)
Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGL-TVTEEEIXXXXXXXXXYLKSIDFPKDKK 60
           L+++G+    VTN++++S +Q    +  LGL ++T ++I         Y+       D K
Sbjct: 42  LKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISSGXITKEYI-------DLK 94
Query: 61  VYVVGEDGILKELELA-GFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY 119
           V    + GI+  L  A    YL    DG K + +       +  +V A+V+  D  FN++
Sbjct: 95  V----DGGIVAYLGTANSANYL--VSDGIKXLPVS-AIDDSNIGEVNALVLLDDEGFNWF 147
Query: 120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPST 179
                T+ +        I  N D    LT        G +         R  +  GKP +
Sbjct: 148 HDLNKTVNLLRKRTIPAIVANTDNTYPLTKTDVAIAIGGVATXIESILGRRFIRFGKPDS 207
Query: 180 ----FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 214
               F  D L  K  I K +I  VGD L TDIL G   G
Sbjct: 208 QXFXFAYDXLRQKXEISKREILXVGDTLHTDILGGNKFG 246

>pdb|2W4M|A Chain A, The Crystal Structure Of Human N-Acetylneuraminic Acid Phosphatase, Nanp Length = 270

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 135 LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS 194
           L + TN D  T     +  A         VG  QRE     KP+  +  Y  N  G+Q  
Sbjct: 149 LLLLTNGDRQTQREKIEACACQSYFDAVVVGGEQREE----KPAPSIFYYCCNLLGVQPG 204
Query: 195 QICMVGDRLDTDILFGQNGGCK 216
              MVGD L+TDI  G N G K
Sbjct: 205 DCVMVGDTLETDIQGGLNAGLK 226

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	257
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	1e-111
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	1e-105
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	1e-105
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	1e-104
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	1e-102
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	1e-101
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	1e-101
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	1e-100
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	1e-99
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	8e-94
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	4e-82
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	2e-49
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	3e-09
2o2x_A	218	Hypothetical protein; structural genomics, joint c	1e-08
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	1e-08
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	1e-08
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	3e-08
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	4e-08
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	9e-08
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	1e-07
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	3e-07
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	4e-07
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	6e-07
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	6e-07
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	6e-07
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	9e-07
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	2e-06
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	2e-06
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	3e-06
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	4e-06
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	7e-06
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	1e-05
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	2e-05
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	4e-05
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	4e-05
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	7e-05
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	1e-04
2hsz_A	243	Novel predicted phosphatase; structural genomics,	2e-04
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	2e-04
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	8e-04

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* Length = 306

 Score =  320 bits (823), Expect = e-111
 Identities = 86/260 (33%), Positives = 133/260 (51%), Gaps = 20/260 (7%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL-TVTEEEIFASSFAAAAYLKSI---DFP 56
            L   GK  +FV+NNS ++R +   +F  LG   +  E++F+S+  AA  L+        
Sbjct: 48  RLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPD 107

Query: 57  KDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYF 116
               V+V+G +G+  EL  AG +  G P  G                 V AV+VG+D +F
Sbjct: 108 APGAVFVLGGEGLRAELRAAGLRLAGDPSAG-----------DGAAPRVRAVLVGYDEHF 156

Query: 117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGK 176
           ++ K++     +R +P CL +AT+RD    L+D     G GS+  A   ++ R+ LVVGK
Sbjct: 157 SFAKLREACAHLR-DPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGK 215

Query: 177 PSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQ----S 232
           PS +M + +   F I  ++  MVGDRL+TDILFG   G  T+L L+GV+ L   Q    +
Sbjct: 216 PSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAA 275

Query: 233 PNNSIQPDFYTNKISDFLSL 252
             + + P +Y   I+D    
Sbjct: 276 GQHDLVPHYYVESIADLTEG 295

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} PDB: 1ys9_A 1wvi_A 1ydf_A Length = 264

 Score =  303 bits (779), Expect = e-105
 Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 27/255 (10%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
            L+ KG   + VTNN+T++ +   +      +    E I+ ++ A   Y+   D  + K 
Sbjct: 32  RLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMN--DMNRGKT 89

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
            YV+GE+G+ K +  AG+                     E  K+   VVVG D    Y K
Sbjct: 90  AYVIGEEGLKKAIADAGYV--------------------EDTKNPAYVVVGLDWNVTYDK 129

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           +   TL I+   G LFI TN D +   T+     G GS+      +T+ +P+ +GKP+  
Sbjct: 130 LATATLAIQN--GALFIGTNPD-LNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAI 186

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           +M+       I ++Q  MVGD   TDI+ G N    TLLV +G T++  +  P+  IQP 
Sbjct: 187 IMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEV--PDLPIQPS 244

Query: 241 FYTNKISDFLSLKAA 255
           +    + ++   +  
Sbjct: 245 YVLASLDEWTFNEGH 259

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} Length = 263

 Score =  303 bits (779), Expect = e-105
 Identities = 81/252 (32%), Positives = 128/252 (50%), Gaps = 20/252 (7%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
            L+ +G    F+TNNSTK+ + Y +K   +G+ V+   I  S  A   Y+     P   K
Sbjct: 28  FLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATRLYMSKHLDP--GK 85

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           ++V+G +G++KE++  G+  +   E                 K+V  VVVG D    Y K
Sbjct: 86  IFVIGGEGLVKEMQALGWGIVTLDEAR-----------QGSWKEVKHVVVGLDPDLTYEK 134

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           ++Y TL IR   G  FI TN DA T   +   + G GS++ A   +T  EP+++GKP+  
Sbjct: 135 LKYATLAIRN--GATFIGTNPDA-TLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEP 191

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           M + +   F     ++ MVGDRLDTDI F +  G K ++VL+GV+SL  ++      +PD
Sbjct: 192 MYEVVREMFP--GEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKS--EYKPD 247

Query: 241 FYTNKISDFLSL 252
                + + +  
Sbjct: 248 LVLPSVYELIDY 259

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} Length = 266

 Score =  301 bits (774), Expect = e-104
 Identities = 78/252 (30%), Positives = 119/252 (47%), Gaps = 27/252 (10%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
            L+ +G   +FVTNNS+++ KQ   K  +  +  TEE++F +S A A ++      KD  
Sbjct: 33  TLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATAQHIAQQ--KKDAS 90

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           VYV+GE+GI + +E  G  +                      ++   VVVG DR   Y K
Sbjct: 91  VYVIGEEGIRQAIEENGLTFG--------------------GENADFVVVGIDRSITYEK 130

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
              G L IR   G  FI+TN D +   T+     G GS+      ST  +P+ +GKP + 
Sbjct: 131 FAVGCLAIRN--GARFISTNGD-IAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESI 187

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           +M+      G   S+  MVGD   TDI+ G N G  TLLV +GVT    +       +P 
Sbjct: 188 IMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDD--MEKPT 245

Query: 241 FYTNKISDFLSL 252
              + +++++  
Sbjct: 246 HAIDSLTEWIPY 257

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* Length = 271

 Score =  296 bits (761), Expect = e-102
 Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 28/253 (11%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
            L+ K KR VF TNNS+   + Y +K   +G+ V ++ +  S    A ++         +
Sbjct: 44  TLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITAEHML--KRFGRCR 101

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           ++++G   + K  E  G                        +++   VV+GFD+   Y +
Sbjct: 102 IFLLGTPQLKKVFEAYGHVI--------------------DEENPDFVVLGFDKTLTYER 141

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP-LVVGKPST 179
           ++   + +R+  G  +IAT+ D +   +        GS++ A   ST R+P L+ GKP+ 
Sbjct: 142 LKKACILLRK--GKFYIATHPD-INCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNP 198

Query: 180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP 239
            ++D ++ KFG+ K ++ MVGDRL TD+  G+N G  ++LVL+G T+   L+      +P
Sbjct: 199 LVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERA--ETKP 256

Query: 240 DFYTNKISDFLSL 252
           DF    + +    
Sbjct: 257 DFVFKNLGELAKA 269

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264

 Score =  295 bits (758), Expect = e-101
 Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 28/251 (11%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFE-TLGLTVTEEEIFASSFAAAAYLKSIDFPKDK 59
            L+ K    +FVTNN+TKS +   ++      + V    ++ ++ A   Y+K     + K
Sbjct: 32  RLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLATIDYMKEA--NRGK 89

Query: 60  KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY 119
           KV+V+GE G++  +  AGF++                     + +   VVVG D   +Y 
Sbjct: 90  KVFVIGEAGLIDLILEAGFEW--------------------DETNPDYVVVGLDTELSYE 129

Query: 120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPST 179
           KV   TL I++  G LFI TN D     T+     G GS+V     +TQ +P+ +GKP  
Sbjct: 130 KVVLATLAIQK--GALFIGTNPDKNIP-TERGLLPGAGSVVTFVETATQTKPVYIGKPKA 186

Query: 180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP 239
            +M+      G++K Q+ MVGD  +TDI  G   G  +LLV SG T  S +        P
Sbjct: 187 IIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVP--TLPTPP 244

Query: 240 DFYTNKISDFL 250
            +  + + ++ 
Sbjct: 245 TYVVDSLDEWT 255

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 Length = 250

 Score =  294 bits (756), Expect = e-101
 Identities = 70/248 (28%), Positives = 111/248 (44%), Gaps = 31/248 (12%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
            +  KG  LV +TN  +++ +    +F T G+ V +   + S+ A A +L+     + KK
Sbjct: 30  GIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRR---QEGKK 86

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
            YVVGE  ++ EL  AGF                       D +   V+VG  R +N+  
Sbjct: 87  AYVVGEGALIHELYKAGFTIT--------------------DVNPDFVIVGETRSYNWDM 126

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           +      +    G  FIATN D          +   G++       + R+P  VGKPS +
Sbjct: 127 MHKAAYFVAN--GARFIATNPDT----HGRGFYPACGALCAGIEKISGRKPFYVGKPSPW 180

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           ++    NK      +  +VGD L TDIL G   G +T+LVLSGV+SL  + S     +P 
Sbjct: 181 IIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSM--PFRPS 238

Query: 241 FYTNKISD 248
           +    +++
Sbjct: 239 WIYPSVAE 246

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} Length = 268

 Score =  292 bits (749), Expect = e-100
 Identities = 75/255 (29%), Positives = 129/255 (50%), Gaps = 27/255 (10%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
            L+  GK+++FV+NNST+SR+   ++  + GL V E+EI  +++A A ++       + K
Sbjct: 35  KLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYATARFIARE--KPNAK 92

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           V+  GE+G+++EL LAG + +                      +   +VVG +R  N+  
Sbjct: 93  VFTTGEEGLIEELRLAGLEIVDYD-------------------EAEYLVVGSNRKINFEL 133

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP-LVVGKPST 179
           +           G  +IATN D +    +     G G ++GA    T REP +VVGKPS 
Sbjct: 134 MTKALRACLR--GIRYIATNPDRIFP-AEDGPIPGTGMIIGALYWMTGREPDVVVGKPSE 190

Query: 180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQS--PNNSI 237
            +M    +  G+    + +VGD++D D+  G+  G +T+LVL+GVT+   L      + +
Sbjct: 191 VIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGL 250

Query: 238 QPDFYTNKISDFLSL 252
           +PD+  N + D +  
Sbjct: 251 KPDYVFNSLKDMVEA 265

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} Length = 284

 Score =  291 bits (746), Expect = 1e-99
 Identities = 62/251 (24%), Positives = 97/251 (38%), Gaps = 20/251 (7%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL-TVTEEEIFASSFAAAAYLKSIDFPKDK 59
            L+++G+    VTN++++S +Q    +  LGL ++T ++I +S      Y+         
Sbjct: 41  YLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISSGMITKEYIDLK--VDGG 98

Query: 60  KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY 119
            V  +G       L   G + L                   +  +V A+V+  D  FN++
Sbjct: 99  IVAYLGTANSANYLVSDGIKMLPVSAID-----------DSNIGEVNALVLLDDEGFNWF 147

Query: 120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPST 179
                T+ +        I  N D    LT        G +         R  +  GKP +
Sbjct: 148 HDLNKTVNLLRKRTIPAIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDS 207

Query: 180 FMM----DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP-- 233
            M     D L  K  I K +I MVGD L TDIL G   G  T LVL+G T +   ++   
Sbjct: 208 QMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIK 267

Query: 234 NNSIQPDFYTN 244
           +  I P     
Sbjct: 268 STGIVPTHICE 278

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271

 Score =  275 bits (707), Expect = 8e-94
 Identities = 50/252 (19%), Positives = 93/252 (36%), Gaps = 30/252 (11%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
            L+    ++ F TN S  SR +   + + LG  ++E+E+ A + AA   LK     +  +
Sbjct: 43  RLKRSRLKVRFCTNESAASRAELVGQLQRLGFDISEQEVTAPAPAACQILKE----RGLR 98

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
            Y++  DG+  E +         P                       V+      F+Y  
Sbjct: 99  PYLLIHDGVRSEFDQIDTS---NPNC--------------------VVIADAGESFSYQN 135

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           +      + E    + I+  +    +   +      G  + A   +   +  VVGKPS  
Sbjct: 136 MNNAFQVLMELEKPVLISLGKG-RYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPE 194

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
                    G++  Q  M+GD +  D+   Q  G + L V +G    S    P   ++ D
Sbjct: 195 FFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPE--VKAD 252

Query: 241 FYTNKISDFLSL 252
            Y + +++ + L
Sbjct: 253 GYVDNLAEAVDL 264

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259

 Score =  245 bits (629), Expect = 4e-82
 Identities = 46/252 (18%), Positives = 91/252 (36%), Gaps = 34/252 (13%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKV 61
           LR+    + FVTN + +++K   ++ + L   ++E+EIF S  AA   ++     + + +
Sbjct: 35  LRATSVMVRFVTNTTKETKKDLLERLKKLEFEISEDEIFTSLTAARNLIEQ---KQVRPM 91

Query: 62  YVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFD-RYFNYYK 120
            ++ +  + +   +                           +D  AVV+G    +F+Y  
Sbjct: 92  LLLDDRALPEFTGVQ-------------------------TQDPNAVVIGLAPEHFHYQL 126

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           +      + +  G   IA ++    +        G G  V A   +T  + +VVGKP   
Sbjct: 127 LNQAFRLLLD--GAPLIAIHKA-RYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKT 183

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
                         +  M+GD    D+   QN G   +LV +G    +  +    +  P 
Sbjct: 184 FFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKI--NPPPY 241

Query: 241 FYTNKISDFLSL 252
                    +  
Sbjct: 242 LTCESFPHAVDH 253

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* Length = 352

 Score =  164 bits (417), Expect = 2e-49
 Identities = 49/311 (15%), Positives = 88/311 (28%), Gaps = 71/311 (22%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEEEIFASSFAAAAYLKSIDFPKDK 59
           +L       + +TN    S +   +     L + V+  +I  S     + +      K  
Sbjct: 40  LLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKSLVN-----KYS 94

Query: 60  KVYVVGEDGILKELELAGFQYLGGPED---------------GGKKIELKPGFLMEHDKD 104
           ++  VG   +    E  GFQ +    D                 + +E          K 
Sbjct: 95  RILAVGTPSVRGVAEGYGFQDVVHQTDIVRYNRDIAPFSGLSDEQVMEYSRDIPDLTTKK 154

Query: 105 VGAVVVGFDRYFNYYKVQYGTLCIR--------------ENPGCLFIATNRDAVTHLTDA 150
             AV+V  D +     +Q  +  I                 P      +N+D +      
Sbjct: 155 FDAVLVFNDPHDWAADIQIISDAINSENGMLNTLRNEKSGKPSIPIYFSNQDLLWANPYK 214

Query: 151 QEWAGGGSMVGAF------VGSTQREPLVVGKPSTFMMDYLANKFGIQK----------- 193
               G G+           +     +   +GKP+    D+  +     +           
Sbjct: 215 LNRFGQGAFRLLVRRLYLELNGEPLQDYTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSV 274

Query: 194 ----------------SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSI 237
                             + MVGD   +DI+  QN G  + LV +GV +           
Sbjct: 275 KQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEGDDLKEC--- 331

Query: 238 QPDFYTNKISD 248
           +P    N + D
Sbjct: 332 KPTLIVNDVFD 342

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179

 Score = 54.1 bits (131), Expect = 3e-09
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 223
           KP   M   +A ++ +  + +  VGD L  D+      GC   LV +G
Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSL-RDLQAAAQAGCAPWLVQTG 147

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 223
           KP+  M+     +  +   +  +VGD+L  D+  G+  G     ++ G
Sbjct: 137 KPNPGMLVEAGKRLALDLQRSLIVGDKL-ADMQAGKRAGLAQGWLVDG 183

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* Length = 211

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 7/75 (9%)

Query: 176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT-LLVLSGVTSLSMLQSPN 234
           KP   M+    +   I  +   MVGD+L  D+         T +LV +G        +P 
Sbjct: 131 KPHPGMLLSARDYLHIDMAASYMVGDKL-EDMQAAVAANVGTKVLVRTGKP-----ITPE 184

Query: 235 NSIQPDFYTNKISDF 249
                D+  N ++D 
Sbjct: 185 AENAADWVLNSLADL 199

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP 233
           V KP   +       F ++  +  MVGDRL +DI   +  G KT+    G       +  
Sbjct: 148 VKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG---KHSEREL 204

Query: 234 NNSIQPDFYTNKISDFLSL 252
                 D+  + +   L +
Sbjct: 205 EYRKYADYEIDNLESLLEV 223

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* Length = 176

 Score = 51.4 bits (124), Expect = 3e-08
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 223
           KP   +++    +  + ++   ++GDR  TDI   +N G   L     
Sbjct: 116 KPKVKLVERYLAEQAMDRANSYVIGDRA-TDIQLAENMGINGLRYDRE 162

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score = 51.0 bits (122), Expect = 4e-08
 Identities = 16/92 (17%), Positives = 37/92 (40%)

Query: 163 FVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS 222
           +  +++ +P  + KP   + D+  N   I K++  MVG+  ++DI+     G   + + +
Sbjct: 84  YASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQN 143

Query: 223 GVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 254
               L   + P  +         ++D      
Sbjct: 144 PEVCLQDERLPLVAPPFVIPVWDLADVPEALL 175

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 50.6 bits (121), Expect = 9e-08
 Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 6/79 (7%)

Query: 174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP 233
             KP   M + + N F ++  +   +GD    D    +  G   + +             
Sbjct: 156 SYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEG------DKV 209

Query: 234 NNSIQPDFYTNKISDFLSL 252
               +  F    I++   +
Sbjct: 210 RKLEERGFEIPSIANLKDV 228

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 28/126 (22%), Positives = 44/126 (34%), Gaps = 22/126 (17%)

Query: 112 FDRYFNYYKVQYGTLC-----IRE------NPGC-LFIATN--RDAVTHLTDAQEWAGGG 157
            ++       +           RE        G   FI T+   +A T L    +  G  
Sbjct: 69  LNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTIL----KDLGVE 124

Query: 158 SMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT 217
           S     + S   +   V KPS     YL +K+ +       +GDR   D+ F QN G ++
Sbjct: 125 SYFTEILTS---QSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDR-TLDVEFAQNSGIQS 180

Query: 218 LLVLSG 223
           +  L  
Sbjct: 181 INFLES 186

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 24/159 (15%), Positives = 47/159 (29%), Gaps = 29/159 (18%)

Query: 112 FDRYFNYYKVQYGTLCIREN---PGC-------------LFIATN--RDAVTHLTDAQEW 153
                +YY+  +    + EN    G              L +AT+        + +    
Sbjct: 66  ATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEH--- 122

Query: 154 AGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG 213
                   A VGS              ++ Y      I+     M+GDR + D++     
Sbjct: 123 FKLAFYFDAIVGS---SLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDR-EYDVIGALKN 178

Query: 214 GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSL 252
              ++ V  G  S   L+    +   ++  N + +    
Sbjct: 179 NLPSIGVTYGFGSYEELK----NAGANYIVNSVDELHKK 213

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 48.3 bits (116), Expect = 4e-07
 Identities = 17/120 (14%), Positives = 35/120 (29%), Gaps = 13/120 (10%)

Query: 135 LFIATN--RDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ 192
           + I +   R  +                   +G    E +   KP    +    ++    
Sbjct: 108 IGIISTKYRFRILSFLRN---HMPDDWFDIIIGG---EDVTHHKPDPEGLLLAIDRLKAC 161

Query: 193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSL 252
             ++  +GD    D       G     V SG+T+    Q    +   D   + +   +S+
Sbjct: 162 PEEVLYIGDS-TVDAGTAAAAGVSFTGVTSGMTTAQEFQ----AYPYDRIISTLGQLISV 216

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 47.5 bits (114), Expect = 6e-07
 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 10/97 (10%)

Query: 135 LFIATNR-DAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK 193
            F+ ++R D V  + +        +     V S         KP+   M YL  K+ I  
Sbjct: 101 HFLVSHRNDQVLEILEK---TSIAAYFTEVVTS---SSGFKRKPNPESMLYLREKYQI-- 152

Query: 194 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML 230
           S   ++GDR   DI  GQ  G  T L  S V    +L
Sbjct: 153 SSGLVIGDR-PIDIEAGQAAGLDTHLFTSIVNLRQVL 188

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 48.2 bits (115), Expect = 6e-07
 Identities = 32/245 (13%), Positives = 64/245 (26%), Gaps = 40/245 (16%)

Query: 19  SRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGF 78
             + Y  K    GL V    +    F  A   +S  FP     + +       ++ L  F
Sbjct: 19  LGEAYATKARAHGLEVEPSALEQG-FRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTF 77

Query: 79  QYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCI----RENPGC 134
              G  +              +    +   +     +   ++V  G        R     
Sbjct: 78  HLAGVQDA-------------QAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLR 124

Query: 135 LFIATNRDAVTH-------LTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLAN 187
           L + +N D           L +  ++       G              KP   +      
Sbjct: 125 LAVISNFDRRLEGILGGLGLREHFDFVLTSEAAG------------WPKPDPRIFQEALR 172

Query: 188 KFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKIS 247
              ++      VGD    D    +  G  + LV+      ++     +S+  +     ++
Sbjct: 173 LAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGP---QALDPVVRDSVPKEHILPSLA 229

Query: 248 DFLSL 252
             L  
Sbjct: 230 HLLPA 234

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251

 Score = 48.1 bits (114), Expect = 6e-07
 Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 2/84 (2%)

Query: 172 LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQ 231
            VV +        + ++F +   +  M+G+ L +D+      G   +     VT      
Sbjct: 158 EVVSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQD 217

Query: 232 SPNNSIQPDFYTNKISDFLSLKAA 255
               + +P      + D     AA
Sbjct: 218 HGVAADEPRLRE--VPDPSGWPAA 239

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240

 Score = 47.4 bits (113), Expect = 9e-07
 Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 7/79 (8%)

Query: 174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP 233
           V KP   +  +  +    +  +  M+GD  + DI      G                +  
Sbjct: 160 VLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVT-------ERT 212

Query: 234 NNSIQPDFYTNKISDFLSL 252
               QP ++ + + + ++L
Sbjct: 213 VFPFQPTYHIHSLKELMNL 231

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 7/81 (8%)

Query: 174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP 233
             KP+  +  +  +  G+Q     MVGD L+TDI  G N G K  + +    + S     
Sbjct: 174 EEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWI----NKSGRVPL 229

Query: 234 NNSIQPDFYTNKISDFLSLKA 254
            +S  P +    +S  L L A
Sbjct: 230 TSSPMPHY---MVSSVLELPA 247

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 9/81 (11%)

Query: 174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP 233
             KP   + +    K G++  +   VGD    D    +N G  ++L+          +  
Sbjct: 153 FFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK------GEKR 206

Query: 234 NNSIQPDFYTNKISDFLSLKA 254
               + DF    +SD   +  
Sbjct: 207 EFWDKCDF---IVSDLREVIK 224

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score = 46.4 bits (110), Expect = 3e-06
 Identities = 38/233 (16%), Positives = 71/233 (30%), Gaps = 28/233 (12%)

Query: 27  FETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPED 86
           F   G+ +T EE            K +   K   V  + E   +       F+ L    D
Sbjct: 33  FHKRGVAITAEEA----------RKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEAD 82

Query: 87  GGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATN--RDAV 144
             +  E     L        + + G        + +   +            T   R+ +
Sbjct: 83  IQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGS---------TTGYTREMM 133

Query: 145 THLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC-MVGDRL 203
             +       G       F+ +    P   G+P  +M    A + G+        VGD +
Sbjct: 134 DIVAKEAALQG---YKPDFLVTPDDVP--AGRPYPWMCYKNAMELGVYPMNHMIKVGDTV 188

Query: 204 DTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA 256
            +D+  G+N G  T+ V+ G + L + +    ++       KI    +     
Sbjct: 189 -SDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVEN 240

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234

 Score = 45.6 bits (108), Expect = 4e-06
 Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 172 LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQ 231
            V+   +      L +   I  S++ MVG+   +DI    + G   + +   V      +
Sbjct: 153 EVMSDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWK--HE 210

Query: 232 SPNNSIQPDFYT-NKISDFLSL 252
                         ++ D LSL
Sbjct: 211 VTETFAHERLKQVKRLDDLLSL 232

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 44.9 bits (107), Expect = 7e-06
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 6/78 (7%)

Query: 176 KPSTFMMDYLANKFGIQ-KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPN 234
                ++ Y+ +   ++ K ++ MVGDR   DI+  +  G  ++ VL G  S   +    
Sbjct: 166 VNKNEVIQYVLDLCNVKDKDKVIMVGDR-KYDIIGAKKIGIDSIGVLYGYGSFEEIS--- 221

Query: 235 NSIQPDFYTNKISDFLSL 252
              +P +    +     +
Sbjct: 222 -ESEPTYIVENVESIKDI 238

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 24/164 (14%), Positives = 42/164 (25%), Gaps = 42/164 (25%)

Query: 112 FDRYFNYYKVQYGTLCIRENP--------------GC-LFIATN--RDAVTHLTDAQEWA 154
                  Y+  Y    I E                   L+I T         +    E  
Sbjct: 64  ISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIH 123

Query: 155 G------GGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDIL 208
                  G S                      ++        +   Q  ++GD    D+L
Sbjct: 124 HFFDGIYGSSPEA--------------PHKADVIHQALQTHQLAPEQAIIIGDT-KFDML 168

Query: 209 FGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSL 252
             +  G + L +  G    + L     + QPD+  +K  + L+ 
Sbjct: 169 GARETGIQKLAITWGFGEQADLL----NYQPDYIAHKPLEVLAY 208

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 171 PLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML 230
                KPS   +       G +  +  +VGD  D DI  G+  G KT L L G   L   
Sbjct: 134 TFGEKKPSPTPVLKTLEILGEEPEKALIVGDT-DADIEAGKRAGTKTALALWGYVKL--- 189

Query: 231 QSPNNSIQPDFYTNKISDFLSL 252
               NS  PDF  ++ SD + L
Sbjct: 190 ----NSQIPDFTLSRPSDLVKL 207

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 223
           KP+  M        G+ + +   +GD  + DI   +N     + V  G
Sbjct: 165 KPAPDMTSECVKVLGVPRDKCVYIGDS-EIDIQTARNSEMDEIAVNWG 211

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 42.2 bits (100), Expect = 4e-05
 Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 12/91 (13%)

Query: 137 IATN--RDAVTHLTDAQEWAG--GGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ 192
           I T   R+      +A   A     + V    G  +  P    KP    +  LA  + + 
Sbjct: 91  ILTRNARELAHVTLEAIGLADCFAEADVL---GRDEAPP----KPHPGGLLKLAEAWDVS 143

Query: 193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSG 223
            S++ MVGD    D+  G+  G +T+LV   
Sbjct: 144 PSRMVMVGDYR-FDLDCGRAAGTRTVLVNLP 173

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score = 41.7 bits (99), Expect = 7e-05
 Identities = 14/81 (17%), Positives = 22/81 (27%), Gaps = 7/81 (8%)

Query: 172 LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQ 231
               KP    +     K  +       +GD   +D    Q       L + G+   +  Q
Sbjct: 134 TPKRKPDPLPLLTALEKVNVAPQNALFIGDS-VSDEQTAQAANVDFGLAVWGMDPNADHQ 192

Query: 232 SPNNSIQPDFYTNKISDFLSL 252
                 +      K  D L L
Sbjct: 193 ------KVAHRFQKPLDILEL 207

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 10/83 (12%)

Query: 170 EPLVVGKPSTFMMDYLANKFGIQKSQIC-MVGDRLDTDILFGQNGGCKTLLVLSGVTSLS 228
                 KPS   +        I+ S+    +GD   +DI      GC  +   S      
Sbjct: 153 GDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDS-ISDIQSAIEAGCLPIKYGSTNII-- 209

Query: 229 MLQSPNNSIQPDFYTNKISDFLS 251
                  S +  +    I +F+ 
Sbjct: 210 ---KDILSFKNFYD---IRNFIC 226

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 5/77 (6%)

Query: 176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNN 235
           KP      YL  KFG+   QI  VGD    DI    + GC  + +  G         P  
Sbjct: 170 KPHPAPFYYLCGKFGLYPKQILFVGDS-QNDIFAAHSAGCAVVGLTYGYNY----NIPIA 224

Query: 236 SIQPDFYTNKISDFLSL 252
             +PD+  +  +D L +
Sbjct: 225 QSKPDWIFDDFADILKI 241

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 7/80 (8%)

Query: 174 VGKPSTFMMDYLANKFG-IQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQS 232
             KP     +Y+  +          ++GD L  DI  GQ  G  T  +         ++ 
Sbjct: 156 FQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPD------MKP 209

Query: 233 PNNSIQPDFYTNKISDFLSL 252
               I P +   K+ +   +
Sbjct: 210 NVPEIIPTYEIRKLEELYHI 229

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 39.4 bits (91), Expect = 8e-04
 Identities = 28/143 (19%), Positives = 43/143 (30%), Gaps = 29/143 (20%)

Query: 135 LFIATNRDAVT-----------HLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMM- 182
           L IAT R                  +A   A    ++ A     Q  PL  GKP+ F   
Sbjct: 234 LGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPL--GKPNPFSYI 291

Query: 183 -------------DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSM 229
                                + K  + +VGD L  D+L  Q  G   +  L+G+     
Sbjct: 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATFIGTLTGLKGKDA 350

Query: 230 LQSPNNSIQPDFYTNKISDFLSL 252
                     D+  N + +   +
Sbjct: 351 AGELEAH-HADYVINHLGELRGV 372

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	257
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	100.0
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	100.0
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	100.0
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	100.0
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	100.0
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	100.0
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.97
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.97
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.97
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.96
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.92
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.9
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.74
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.72
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.71
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.71
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.7
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.69
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.67
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.67
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.67
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.66
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.66
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.65
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.65
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.65
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.64
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.64
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.64
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.63
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.63
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.63
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.62
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.62
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.62
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.62
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.61
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.61
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.6
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.6
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.59
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.59
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.59
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.59
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.59
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.58
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.58
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.57
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.56
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.56
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.56
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.55
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.55
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.55
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.54
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.53
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.53
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.52
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.52
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.52
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.48
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.44
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.44
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.43
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.42
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.42
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.4
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.39
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.39
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.39
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.38
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.36
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.35
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.32
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.29
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.29
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.28
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.26
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.26
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.22
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.17
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.17
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.15
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.09
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.08
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.05
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.05
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.03
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.01
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.0
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	98.96
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.93
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	98.87
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.86
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.86
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	98.83
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.28
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.77
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.77
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.69
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	98.68
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	98.67
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	98.67
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	98.64
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.63
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	98.55
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	98.53
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	98.49
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	98.43
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.32
3fvv_A	232	Uncharacterized protein; unknown function, structu	98.27
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.24
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	98.2
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.13
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	98.06
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.05
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	97.99
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	97.85
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	97.85
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	97.78
3dao_A	283	Putative phosphatse; structural genomics, joint ce	97.73
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	97.68
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	97.61
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	97.59
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	97.54
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	97.41
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	97.39
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	97.34
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	97.34
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.23
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	97.12
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	97.04
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	97.0
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	96.65
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	96.6
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	96.58
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	96.1
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	96.03
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	95.83
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	95.6
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	94.68
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	94.6
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	93.95
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	93.92
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	93.85
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	93.59
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	93.46
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	93.25
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	93.19
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	93.17
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	92.65
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	92.61
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	92.42
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	92.38
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	92.03
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	91.92
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	91.49
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	91.16
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	90.78
2o2x_A	218	Hypothetical protein; structural genomics, joint c	90.74
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	90.39
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	90.02
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	89.97
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	89.79
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	89.69
3mn1_A	189	Probable YRBI family phosphatase; structural genom	89.53
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	89.11
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	88.89
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	88.82
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	88.74
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	88.64
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	88.54
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	88.54
3mmz_A	176	Putative HAD family hydrolase; structural genomics	88.52
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	88.17
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	87.63
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	87.1
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	86.71
1te2_A	226	Putative phosphatase; structural genomics, phospha	86.64
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	86.55
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	86.48
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	86.3
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	86.16
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	85.81
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	85.81
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	85.73
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	85.64
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	84.78
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	84.77
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	84.54
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	84.22
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	83.65
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	83.46
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	83.25
2hsz_A	243	Novel predicted phosphatase; structural genomics,	83.05
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	82.21
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	81.91
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	81.86
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	81.81
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	81.43
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	80.93
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	80.51
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	80.18

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=100.00  E-value=5.8e-40  Score=288.71  Aligned_cols=246  Identities=20%  Similarity=0.166  Sum_probs=199.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHH-hCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFE-TLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~-~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~   80 (257)
                      |++.|++++|+||||++++++++++|+ ++|+++++++|+||+.+++.|+.     ++++||++|+++++++|++.|++.
T Consensus        41 l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~~~~-----~~~~v~viG~~~l~~~l~~~G~~~  115 (352)
T 3kc2_A           41 LNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKSLVN-----KYSRILAVGTPSVRGVAEGYGFQD  115 (352)
T ss_dssp             HHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGGGTT-----TCSEEEEESSTTHHHHHHHHTCSE
T ss_pred             HHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHHHHh-----cCCEEEEECCHHHHHHHHhCCCeE
Confidence            788999999999999999999999999 69999999999999999998874     237999999999999999999998


Q ss_pred             eCCCCCCC------Ccc-ccCC------Cc-c-cCCCCCccEEEEeccCCCCHHHHHHHHHHHHc--------------C
Q 025117           81 LGGPEDGG------KKI-ELKP------GF-L-MEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRE--------------N  131 (257)
Q Consensus        81 ~~~~~~~~------~~~-~~~~------~~-~-~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~--------------~  131 (257)
                      +..+.+..      ..+ .+..      +. . ...++.+++|+++.|+...|.+++.++.+|..              .
T Consensus       116 v~~~~d~~~~~~~~~p~~~l~~ee~~~~~d~ipD~~~~~v~AVvv~~Dp~d~~~~lq~~~d~L~s~~G~~~~~~~~~~~~  195 (352)
T 3kc2_A          116 VVHQTDIVRYNRDIAPFSGLSDEQVMEYSRDIPDLTTKKFDAVLVFNDPHDWAADIQIISDAINSENGMLNTLRNEKSGK  195 (352)
T ss_dssp             EEEHHHHHHHCGGGCTTCCCCHHHHHHHCCCCTTTTTSCCCEEEECSCCSCHHHHHHHHHHHHTSBTTBTTCCCSCCCSS
T ss_pred             ecchhHhhhhcccccccccCCHHHHhhhccCcccccccCCCEEEEeCCCcchHHHHHHHHHHHHhcCCCcCcccccccCC
Confidence            74321100      000 0000      00 0 01136789999999999999999999999863              2


Q ss_pred             CCceEEEecCCCccccCCCcccccCchHHHHHHh----ccCCC--ccccCCCcHHHHHHHHHHhC---------------
Q 025117          132 PGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVG----STQRE--PLVVGKPSTFMMDYLANKFG---------------  190 (257)
Q Consensus       132 ~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~----~~~~~--~~~~gKP~p~~~~~~~~~~~---------------  190 (257)
                      +++++|+||+|..++....+.++|.|+|..+++.    .+|.+  +..+|||+|.+|+++++.++               
T Consensus       196 ~~~~~i~tN~D~~~~~~~~~~r~g~Ga~~~al~~~y~~~tg~~~~~~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~  275 (352)
T 3kc2_A          196 PSIPIYFSNQDLLWANPYKLNRFGQGAFRLLVRRLYLELNGEPLQDYTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVK  275 (352)
T ss_dssp             CSSCEEESCCCSEECCSSSSCEECHHHHHHHHHHHHHHHHSSCCCCEECSTTCHHHHHHHHHHHHHHHHHHHC-------
T ss_pred             CCCeEEEECCCcccccCCCCcccCchHHHHHHHHHHHHhcCCCCCceEecCCCHHHHHHHHHHHHHHHHhhhcccccccc
Confidence            5779999999999887656678899999888877    56665  47899999999999977642               


Q ss_pred             ------------CCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          191 ------------IQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       191 ------------~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                                  .++++++||||++.+||.+|+++||+++||.+|.+..++..   ....|+++++++.|+.+++..
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~---~~~~pd~vi~~l~el~~~il~  349 (352)
T 3kc2_A          276 QKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEGDDL---KECKPTLIVNDVFDAVTKTLE  349 (352)
T ss_dssp             -------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSCCTTCCC---TTCCCSEECSSHHHHHHHHHH
T ss_pred             cccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCCCCccccc---ccCCCCEEECCHHHHHHHHHH
Confidence                        26799999999987899999999999999999988765421   236899999999999988753

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=100.00  E-value=5.4e-35  Score=247.61  Aligned_cols=233  Identities=33%  Similarity=0.575  Sum_probs=194.1

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCeee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL   81 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~~   81 (257)
                      |++.|++++|+||++.++...+.++|+++|++...++|+++..++..|+++..  ++++++++|.+++.+++++.|+...
T Consensus        29 l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~~~~~~l~~~~--~~~~v~viG~~~l~~~l~~~G~~~~  106 (263)
T 1zjj_A           29 LKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATRLYMSKHL--DPGKIFVIGGEGLVKEMQALGWGIV  106 (263)
T ss_dssp             HHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHHHHHHHS--CCCCEEEESCHHHHHHHHHHTSCBC
T ss_pred             HHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHHHHHHHHHHhC--CCCEEEEEcCHHHHHHHHHcCCeec
Confidence            67789999999999999999999999999999999999999999999998753  3478999999999999999998764


Q ss_pred             C-CCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH
Q 025117           82 G-GPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV  160 (257)
Q Consensus        82 ~-~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~  160 (257)
                      . ..++.            +...++++|+++++....|+++.+++..|+  .|..+|+||++..++.... ...+.+.+.
T Consensus       107 ~~~~~~~------------~~~~~~~~v~~g~~~~~~~~~~~~~l~~L~--~g~~~i~tn~~~~~~~~~~-~l~~~~~l~  171 (263)
T 1zjj_A          107 TLDEARQ------------GSWKEVKHVVVGLDPDLTYEKLKYATLAIR--NGATFIGTNPDATLPGEEG-IYPGAGSII  171 (263)
T ss_dssp             CHHHHHT------------TGGGGCCEEEECCCTTCBHHHHHHHHHHHH--TTCEEEESCCCSEEEETTE-EEECHHHHH
T ss_pred             cCCcccc------------cccCCCCEEEEecCCCCCHHHHHHHHHHHH--CCCEEEEECCCccccCCCC-CcCCcHHHH
Confidence            2 00000            001247899999999999999999999998  4788899999997652222 344445677


Q ss_pred             HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCc
Q 025117          161 GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD  240 (257)
Q Consensus       161 ~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd  240 (257)
                      ..+..+.+.+....+||+|.+|+.++++  ++|++++||||++.+||.+|+++|+++++|.+|.+..+++..  ....|+
T Consensus       172 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~--~~~~p~  247 (263)
T 1zjj_A          172 AALKVATNVEPIIIGKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKK--SEYKPD  247 (263)
T ss_dssp             HHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTT--CSSCCS
T ss_pred             HHHHHHhCCCccEecCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHh--cCCCCC
Confidence            7777777888788899999999999998  899999999999779999999999999999999988777653  224799


Q ss_pred             EEECChhhHHHHHHh
Q 025117          241 FYTNKISDFLSLKAA  255 (257)
Q Consensus       241 ~~~~~l~el~~~l~~  255 (257)
                      ++++++.|+.+++..
T Consensus       248 ~~~~~l~el~~~l~~  262 (263)
T 1zjj_A          248 LVLPSVYELIDYLKT  262 (263)
T ss_dssp             EEESSGGGGGGGGC-
T ss_pred             EEECCHHHHHHHHhh
Confidence            999999999887654

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=100.00  E-value=5.2e-32  Score=229.26  Aligned_cols=222  Identities=31%  Similarity=0.516  Sum_probs=193.4

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCeee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL   81 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~~   81 (257)
                      |+++|++++|+|||++|+...+.++|+.+|+++..++++|+..++..|+++..  ...++++++...+.+.+++.|+...
T Consensus        33 l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~g~~~~  110 (264)
T 3epr_A           33 LQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMN--RGKTAYVIGEEGLKKAIADAGYVED  110 (264)
T ss_dssp             HHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHHHHHHHT--CCSEEEEESCHHHHHHHHHTTCEEC
T ss_pred             HHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHHHHHHHHhC--CCCeEEEECCHHHHHHHHHcCCccc
Confidence            67889999999999999999999999999999999999999999999998653  3478999999999999999998763


Q ss_pred             CCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHH
Q 025117           82 GGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG  161 (257)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~  161 (257)
                                          ...+++++.+.+..+.|+.+..++..++  .+..+++||++...+.... ..++.+.+..
T Consensus       111 --------------------~~~~~~v~~~~~~~~~~~~~~~~~~~l~--~~~~~i~~n~~~~~~~~~~-~~~~~~~~~~  167 (264)
T 3epr_A          111 --------------------TKNPAYVVVGLDWNVTYDKLATATLAIQ--NGALFIGTNPDLNIPTERG-LLPGAGSLNA  167 (264)
T ss_dssp             --------------------SSSCSEEEECCCTTCCHHHHHHHHHHHH--TTCEEEESCCCSEEEETTE-EEECHHHHHH
T ss_pred             --------------------CCcCCEEEEeCCCCCCHHHHHHHHHHHH--CCCeEEEEcCCccccCCCc-eecCccHHHH
Confidence                                2456889999888999999999988886  4788999999986654322 4566677888


Q ss_pred             HHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcE
Q 025117          162 AFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDF  241 (257)
Q Consensus       162 ~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~  241 (257)
                      .+....+.+....+||+|.+|+.+++++|++|++++||||++.+||.+|+++|+++++|.||.+..+++..  ....||+
T Consensus       168 ~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~--~~~~pd~  245 (264)
T 3epr_A          168 LLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPD--LPIQPSY  245 (264)
T ss_dssp             HHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGG--CSSCCSE
T ss_pred             HHHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHh--cCCCCCE
Confidence            88887888888899999999999999999999999999999669999999999999999999988877653  2348999


Q ss_pred             EECChhhHH
Q 025117          242 YTNKISDFL  250 (257)
Q Consensus       242 ~~~~l~el~  250 (257)
                      +++++.||.
T Consensus       246 ~~~~l~~l~  254 (264)
T 3epr_A          246 VLASLDEWT  254 (264)
T ss_dssp             EESCGGGCC
T ss_pred             EECCHHHHh
Confidence            999999874

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=100.00  E-value=7e-32  Score=233.36  Aligned_cols=241  Identities=36%  Similarity=0.638  Sum_probs=194.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCC-CCCCceechHHHHHHHHHhcCCC----CCCEEEEEcCHHHHHHHHHc
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASSFAAAAYLKSIDFP----KDKKVYVVGEDGILKELELA   76 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~-~~~~~i~ts~~~~~~~l~~~~~~----~~~~v~vlg~~~~~~~l~~~   76 (257)
                      |++.|++++|+|||+++++..+.++|+++|++ +..++++||+.++..|+.+. ++    .+.+++++|...+.+.+...
T Consensus        49 l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~l~~~-~~~~~~~~~~v~~~g~~~l~~~l~~~  127 (306)
T 2oyc_A           49 LARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQR-LPGPPDAPGAVFVLGGEGLRAELRAA  127 (306)
T ss_dssp             HHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCGGGEEEHHHHHHHHHHHH-CCSCSSSCCEEEEESCHHHHHHHHHT
T ss_pred             HHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCChhhEEcHHHHHHHHHHhh-CCccccCCCeEEEECCHHHHHHHHHC
Confidence            67899999999999999999999999999999 89999999999999999862 21    15789999999999999999


Q ss_pred             CCeeeCCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccC
Q 025117           77 GFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGG  156 (257)
Q Consensus        77 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~  156 (257)
                      |+.......+           .....+.+++|+.+.+....|+++.+++..++. .+.++|+||++..............
T Consensus       128 g~~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~~-~g~~~i~tn~~~~~~~~~~~~~~~~  195 (306)
T 2oyc_A          128 GLRLAGDPSA-----------GDGAAPRVRAVLVGYDEHFSFAKLREACAHLRD-PECLLVATDRDPWHPLSDGSRTPGT  195 (306)
T ss_dssp             TCEETTSCCC-----------C---CCCEEEEEECCCTTCCHHHHHHHHHHHTS-TTSEEEESCCCCEEECTTSCEEECH
T ss_pred             CCEeeccccc-----------ccccCCCCCEEEEeCCCCCCHHHHHHHHHHHHc-CCCEEEEEcCCccccCCCCCcCCCC
Confidence            9887532111           011235578999999999999999999999986 4669999999986642221234455


Q ss_pred             chHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcC----
Q 025117          157 GSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQS----  232 (257)
Q Consensus       157 g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~----  232 (257)
                      |.+...+....+.+....+||+|.+|+.+++++|++|++++||||++.+||.+|+++|+++++|.||.+..+++..    
T Consensus       196 g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~  275 (306)
T 2oyc_A          196 GSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAA  275 (306)
T ss_dssp             HHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHT
T ss_pred             cHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcc
Confidence            5566666666667777789999999999999999999999999999669999999999999999999987665431    


Q ss_pred             CCCCCCCcEEECChhhHHHHHHh
Q 025117          233 PNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       233 ~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      ......|+++++++.||.++++.
T Consensus       276 ~~~~~~pd~vi~~l~el~~~l~~  298 (306)
T 2oyc_A          276 GQHDLVPHYYVESIADLTEGLED  298 (306)
T ss_dssp             TCGGGSCSEEESSGGGGGGGC--
T ss_pred             cccCCCCCEEECCHHHHHHHHHh
Confidence            11225799999999999887654

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=100.00  E-value=1.7e-32  Score=234.56  Aligned_cols=227  Identities=25%  Similarity=0.304  Sum_probs=179.3

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCC-CCCCceechHHHHHHHHHhcCCCCCCEEE-EEcCHHHHHHHHHcCCe
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASSFAAAAYLKSIDFPKDKKVY-VVGEDGILKELELAGFQ   79 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~-~~~~~i~ts~~~~~~~l~~~~~~~~~~v~-vlg~~~~~~~l~~~g~~   79 (257)
                      |++.|++++|+|||+++++..+.++|+++|++ ...++|+++..++..||+++ + ++ ++| ++|..++.+++++.|+.
T Consensus        42 l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~~~~~~~~~l~~~-~-~~-~v~~~lg~~~l~~~l~~~G~~  118 (284)
T 2hx1_A           42 LKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISSGMITKEYIDLK-V-DG-GIVAYLGTANSANYLVSDGIK  118 (284)
T ss_dssp             HHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEEHHHHHHHHHHHH-C-CS-EEEEEESCHHHHHTTCBTTEE
T ss_pred             HHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEcHHHHHHHHHHhh-c-CC-cEEEEecCHHHHHHHHHCCCe
Confidence            67899999999999999999999999999999 99999999999999999864 3 34 899 99999999999999987


Q ss_pred             eeCCCCCCCCccccCCCcccCCCCCccEEEEeccCCC----CHHHHHHHHHHHHcCCCceEEEecCCCccc-cCCCcccc
Q 025117           80 YLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYF----NYYKVQYGTLCIRENPGCLFIATNRDAVTH-LTDAQEWA  154 (257)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~----~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~-~~~~~~~~  154 (257)
                      ....+...           .+..+.+++|+++++..+    .|+++.+   .|++ .|+++|+||++..+. .... ..+
T Consensus       119 ~~~~~~~~-----------~~~~~~~~avv~~~~~~~~~~~~~~~l~~---~L~~-~g~~~i~tn~~~~~~~~~~~-~~~  182 (284)
T 2hx1_A          119 MLPVSAID-----------DSNIGEVNALVLLDDEGFNWFHDLNKTVN---LLRK-RTIPAIVANTDNTYPLTKTD-VAI  182 (284)
T ss_dssp             EEEGGGCC-----------TTTGGGEEEEEECCSSSSCHHHHHHHHHH---HHHH-CCCCEEEECCCSEEECSSSC-EEE
T ss_pred             eccCCCCC-----------cccCCCCCEEEEeCCCCcCccccHHHHHH---HHhc-CCCeEEEECCCccccCcCCC-ccc
Confidence            65211000           000245889999998887    4444443   5655 466699999998764 2211 223


Q ss_pred             cCchHHHHHHhccCCCccccCCCcHHHHHHHHHHh----CCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhh
Q 025117          155 GGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKF----GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML  230 (257)
Q Consensus       155 ~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~----~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~  230 (257)
                      +.+.+...+....+.+....+||+|.+|+.+++++    +++|++|+||||++.+||.+|+++||++++|.+|.+..+++
T Consensus       183 ~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l  262 (284)
T 2hx1_A          183 AIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDA  262 (284)
T ss_dssp             CHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGH
T ss_pred             cCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHH
Confidence            33445555555566677778999999999999999    99999999999997799999999999999999999876654


Q ss_pred             c----CCCCCCCCcEEECChhhH
Q 025117          231 Q----SPNNSIQPDFYTNKISDF  249 (257)
Q Consensus       231 ~----~~~~~~~pd~~~~~l~el  249 (257)
                      .    .  ....||++++++.||
T Consensus       263 ~~~~~~--~~~~pd~~~~~l~el  283 (284)
T 2hx1_A          263 ETKIKS--TGIVPTHICESAVIE  283 (284)
T ss_dssp             HHHHHH--HTCCCSEEESCSCCC
T ss_pred             Hhhhhc--cCCCCCEEccchhhh
Confidence            3    1  124799999999886

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=100.00  E-value=3.5e-31  Score=224.11  Aligned_cols=227  Identities=33%  Similarity=0.584  Sum_probs=196.2

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCeee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL   81 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~~   81 (257)
                      |+++|++++|+||+++|++..+.+.|..+|+++..++++++..+...++.+..  .+++++++|...+..++.+.|+...
T Consensus        36 l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~  113 (268)
T 3qgm_A           36 LKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYATARFIAREK--PNAKVFTTGEEGLIEELRLAGLEIV  113 (268)
T ss_dssp             HHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHHHHS--TTCEEEECCCHHHHHHHHHTTCEEC
T ss_pred             HHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHHHHHHHHHHhhC--CCCeEEEEcCHHHHHHHHHcCCeec
Confidence            67899999999999999999999999999999999999999999999998653  3478999999999999999998874


Q ss_pred             CCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHH
Q 025117           82 GGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG  161 (257)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~  161 (257)
                      .                   ...+++++.+.+..+.|+.+..++..++.  +..++++|++...+.. ....++.+.+..
T Consensus       114 ~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~i~~n~~~~~~~~-~~~~~~~~~~~~  171 (268)
T 3qgm_A          114 D-------------------YDEAEYLVVGSNRKINFELMTKALRACLR--GIRYIATNPDRIFPAE-DGPIPGTGMIIG  171 (268)
T ss_dssp             C-------------------TTTCSEEEECCCTTCBHHHHHHHHHHHHH--TCEEEESCCCCEEEET-TEEEECTHHHHH
T ss_pred             C-------------------CCCCCEEEEecCCCCCHHHHHHHHHHHhC--CCcEEEEeCCCcccCC-CCceeChHHHHH
Confidence            2                   34577889999888999999999888874  6789999999876543 224667788888


Q ss_pred             HHHhccCCCc-cccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhc----CCCCC
Q 025117          162 AFVGSTQREP-LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQ----SPNNS  236 (257)
Q Consensus       162 ~i~~~~~~~~-~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~----~~~~~  236 (257)
                      .+....+.+. ...+||+|.+|+.+++++|++|++++||||++.+||.+|+++|+++++|.+|....+.+.    .  ..
T Consensus       172 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~--~~  249 (268)
T 3qgm_A          172 ALYWMTGREPDVVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIER--HG  249 (268)
T ss_dssp             HHHHHHSCCCSEECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHH--HT
T ss_pred             HHHHHhCCCcceecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccc--cC
Confidence            8888888888 889999999999999999999999999999966999999999999999999988766543    1  12


Q ss_pred             CCCcEEECChhhHHHHHH
Q 025117          237 IQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       237 ~~pd~~~~~l~el~~~l~  254 (257)
                      ..|||+++++.||.++|.
T Consensus       250 ~~~d~v~~~~~el~~~l~  267 (268)
T 3qgm_A          250 LKPDYVFNSLKDMVEALE  267 (268)
T ss_dssp             CCCSEEESSHHHHHHTC-
T ss_pred             CCCCEEECCHHHHHHHHh
Confidence            479999999999998864

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.97  E-value=7.9e-30  Score=215.34  Aligned_cols=222  Identities=33%  Similarity=0.568  Sum_probs=186.4

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHh-CCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~-~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~   80 (257)
                      |++.|+++.++||++..+...+.++|.+ +|++..+++++++..+...|+.+..  +.+.++.+|...+.+.+++.|+..
T Consensus        33 l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~l~~~l~~~g~~~  110 (264)
T 1yv9_A           33 LQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLATIDYMKEAN--RGKKVFVIGEAGLIDLILEAGFEW  110 (264)
T ss_dssp             HHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHHHHHHHHHHC--CCSEEEEESCHHHHHHHHHTTCEE
T ss_pred             HHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHHHHHHHHhhC--CCCEEEEEeCHHHHHHHHHcCCcc
Confidence            5778999999999999999999999998 9999999999999999999998752  457899999999999999999887


Q ss_pred             eCCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH
Q 025117           81 LGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV  160 (257)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~  160 (257)
                      .                    ...+++++.+.+....|+.+.+++..|+  .|..+|+||++..++.... ..++.+.+.
T Consensus       111 ~--------------------~~~~~~v~~~~~~~~~~~~~~~~l~~l~--~g~~~i~tn~~~~~~~~~~-~~~~~~~l~  167 (264)
T 1yv9_A          111 D--------------------ETNPDYVVVGLDTELSYEKVVLATLAIQ--KGALFIGTNPDKNIPTERG-LLPGAGSVV  167 (264)
T ss_dssp             C--------------------SSSCSEEEECCCTTCCHHHHHHHHHHHH--TTCEEEESCCCSEEEETTE-EEECHHHHH
T ss_pred             c--------------------CCCCCEEEEECCCCcCHHHHHHHHHHHh--CCCEEEEECCCCcccCCCC-cccCCcHHH
Confidence            4                    2346788889888899999999999997  4777899999886532212 234555566


Q ss_pred             HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCc
Q 025117          161 GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD  240 (257)
Q Consensus       161 ~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd  240 (257)
                      ..+....+.+....+||+|.+|+.+++++|++|++|+||||++.+||.+|+++|+++++|.+|.+..+++..  ....||
T Consensus       168 ~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~--~~~~~d  245 (264)
T 1yv9_A          168 TFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPT--LPTPPT  245 (264)
T ss_dssp             HHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTT--CSSCCS
T ss_pred             HHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHh--cCCCCC
Confidence            666666666667789999999999999999999999999999669999999999999999999877655432  224799


Q ss_pred             EEECChhhHH
Q 025117          241 FYTNKISDFL  250 (257)
Q Consensus       241 ~~~~~l~el~  250 (257)
                      ++++++.|+.
T Consensus       246 ~v~~~l~el~  255 (264)
T 1yv9_A          246 YVVDSLDEWT  255 (264)
T ss_dssp             EEESSGGGCC
T ss_pred             EEEecHHHHh
Confidence            9999999874

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.97  E-value=1.4e-29  Score=214.26  Aligned_cols=227  Identities=34%  Similarity=0.566  Sum_probs=188.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCeee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL   81 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~~   81 (257)
                      |+++|++++|+||+|+|+...+.+.|..+|+++..++++++..+...++.+..  ..+++++++...+.+.+++.|+...
T Consensus        34 l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~  111 (266)
T 3pdw_A           34 LKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATAQHIAQQK--KDASVYVIGEEGIRQAIEENGLTFG  111 (266)
T ss_dssp             HHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHHHHC--TTCEEEEESCHHHHHHHHHTTCEEC
T ss_pred             HHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCHHHHHHHHHHhhC--CCCEEEEEeChhHHHHHHHcCCccC
Confidence            68899999999999999999999999999999999999999999999997653  3478999999999999999998763


Q ss_pred             CCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHH
Q 025117           82 GGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG  161 (257)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~  161 (257)
                                          ...++.++.+.+....|+++..++..++.  +..+++||++........ ..++.+.+..
T Consensus       112 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~i~~n~~~~~~~~~~-~~~~~~~~~~  168 (266)
T 3pdw_A          112 --------------------GENADFVVVGIDRSITYEKFAVGCLAIRN--GARFISTNGDIAIPTERG-LLPGNGSLTS  168 (266)
T ss_dssp             --------------------CTTCSEEEECCCTTCCHHHHHHHHHHHHT--TCEEEESCCCCEEEETTE-EEECHHHHHH
T ss_pred             --------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHHC--CCeEEEEcCCceeECCCc-eEecchHHHH
Confidence                                23467888888889999999998888874  678899999986643222 3445556667


Q ss_pred             HHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcE
Q 025117          162 AFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDF  241 (257)
Q Consensus       162 ~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~  241 (257)
                      .+....+.+....+||+|.+|+.+++++|+++++++||||++.+||.+|+++|+.+++|.||.+..+++..  ....|||
T Consensus       169 ~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~--~~~~~d~  246 (266)
T 3pdw_A          169 VLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTD--DMEKPTH  246 (266)
T ss_dssp             HHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCT--TSCCCSE
T ss_pred             HHHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHh--cCCCCCE
Confidence            77777777778889999999999999999999999999999669999999999999999999887776543  1247999


Q ss_pred             EECChhhHHHHHHh
Q 025117          242 YTNKISDFLSLKAA  255 (257)
Q Consensus       242 ~~~~l~el~~~l~~  255 (257)
                      +++++.||.+.++.
T Consensus       247 v~~~~~el~~~~~~  260 (266)
T 3pdw_A          247 AIDSLTEWIPYIEG  260 (266)
T ss_dssp             EESSGGGGHHHHHH
T ss_pred             EeCCHHHHHHHhhc
Confidence            99999999987653

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.97  E-value=3.2e-28  Score=206.09  Aligned_cols=225  Identities=30%  Similarity=0.531  Sum_probs=184.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCeee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL   81 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~~   81 (257)
                      |++.|++++|+||+++|+...+.+.|+.+|+++..++++++..+...|+.+..  .+.++++.|...+.+.+++.|+...
T Consensus        45 l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~g~~~~  122 (271)
T 1vjr_A           45 LKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITAEHMLKRF--GRCRIFLLGTPQLKKVFEAYGHVID  122 (271)
T ss_dssp             HHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHHHHH--CSCEEEEESCHHHHHHHHHTTCEEC
T ss_pred             HHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHHHHHHHHhC--CCCeEEEEcCHHHHHHHHHcCCccC
Confidence            67899999999999999999999999999999988999999999999987642  3468999999999999999998764


Q ss_pred             CCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHH
Q 025117           82 GGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG  161 (257)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~  161 (257)
                                          ....++++.+.+....|+.+...+..+ . .+..+++||++........ .....+.+..
T Consensus       123 --------------------~~~~~~~~~~~~~~~~~~~~~~~l~~l-~-~~~~~i~tn~~~~~~~~~~-~~~~~~~l~~  179 (271)
T 1vjr_A          123 --------------------EENPDFVVLGFDKTLTYERLKKACILL-R-KGKFYIATHPDINCPSKEG-PVPDAGSIMA  179 (271)
T ss_dssp             --------------------SSSCSEEEECCCTTCCHHHHHHHHHHH-T-TTCEEEESCCCSEECCTTS-CEECHHHHHH
T ss_pred             --------------------CCCCCEEEEeCCCCcCHHHHHHHHHHH-H-CCCeEEEECCCccccCCCC-ccccccHHHH
Confidence                                123567888888888999999888888 3 5777799999876543221 2333333444


Q ss_pred             HHHhccCCCc-cccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCc
Q 025117          162 AFVGSTQREP-LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD  240 (257)
Q Consensus       162 ~i~~~~~~~~-~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd  240 (257)
                      .+....+.+. ...+||+|.+|+.+++++|++|++|+||||++.+|+.+|+++|+.+++|.||....+++..  ....|+
T Consensus       180 ~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~--~~~~~~  257 (271)
T 1vjr_A          180 AIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLER--AETKPD  257 (271)
T ss_dssp             HHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHH--CSSCCS
T ss_pred             HHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhh--cCCCCC
Confidence            5555555566 7789999999999999999999999999999659999999999999999999887766542  124799


Q ss_pred             EEECChhhHHHHH
Q 025117          241 FYTNKISDFLSLK  253 (257)
Q Consensus       241 ~~~~~l~el~~~l  253 (257)
                      ++++++.||.+++
T Consensus       258 ~~i~~l~el~~~l  270 (271)
T 1vjr_A          258 FVFKNLGELAKAV  270 (271)
T ss_dssp             EEESSHHHHHHHH
T ss_pred             EEECCHHHHHHHh
Confidence            9999999999876

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.96  E-value=3.6e-27  Score=197.69  Aligned_cols=221  Identities=22%  Similarity=0.266  Sum_probs=179.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCeee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL   81 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~~   81 (257)
                      |++.|+++.++||++.++...+.+.|.++|++...++++++..++..|+.+..    .++++++.+.+.+.+...+.   
T Consensus        35 l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---  107 (259)
T 2ho4_A           35 LRATSVMVRFVTNTTKETKKDLLERLKKLEFEISEDEIFTSLTAARNLIEQKQ----VRPMLLLDDRALPEFTGVQT---  107 (259)
T ss_dssp             HHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHHHHT----CCEEEESCGGGGGGGTTCCC---
T ss_pred             HHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCccHHHeecHHHHHHHHHHHcC----CeEEEEeCHHHHHHHHHcCC---
Confidence            67889999999999999999999999999999999999999999999887653    35788998887776654331   


Q ss_pred             CCCCCCCCccccCCCcccCCCCCccEEEEec-cCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH
Q 025117           82 GGPEDGGKKIELKPGFLMEHDKDVGAVVVGF-DRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV  160 (257)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~-d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~  160 (257)
                                           ..+++++.+. +....|+.+.+.+..++  .+..+++||.+..... ..+...+++.++
T Consensus       108 ---------------------~~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~~~~i~t~~~~~~~~-~~~~~~~~~~~~  163 (259)
T 2ho4_A          108 ---------------------QDPNAVVIGLAPEHFHYQLLNQAFRLLL--DGAPLIAIHKARYYKR-KDGLALGPGPFV  163 (259)
T ss_dssp             ---------------------SSCCEEEECCCGGGCBHHHHHHHHHHHH--TTCCEEESCCCSEEEE-TTEEEECSHHHH
T ss_pred             ---------------------CCCCEEEEecCCCCCCHHHHHHHHHHHH--CCCEEEEECCCCcCcc-cCCcccCCcHHH
Confidence                                 1245677665 34568999999999887  4666699999886643 345678888898


Q ss_pred             HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCc
Q 025117          161 GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD  240 (257)
Q Consensus       161 ~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd  240 (257)
                      +.+....+.+....+||+|.+|+.+++++|++|++|+||||++.+||.+|+++|+++++|.+|.+...+...  ....|+
T Consensus       164 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~--~~~~~~  241 (259)
T 2ho4_A          164 TALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEK--INPPPY  241 (259)
T ss_dssp             HHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGG--SSSCCS
T ss_pred             HHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccc--cCCCCC
Confidence            877666667777789999999999999999999999999999559999999999999999999654433211  125799


Q ss_pred             EEECChhhHHHHHHh
Q 025117          241 FYTNKISDFLSLKAA  255 (257)
Q Consensus       241 ~~~~~l~el~~~l~~  255 (257)
                      ++++++.|+.+++..
T Consensus       242 ~~~~~l~~l~~~l~~  256 (259)
T 2ho4_A          242 LTCESFPHAVDHILQ  256 (259)
T ss_dssp             EEESCHHHHHHHHHH
T ss_pred             EEECCHHHHHHHHHH
Confidence            999999999988754

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.92  E-value=4.8e-23  Score=170.42  Aligned_cols=219  Identities=32%  Similarity=0.512  Sum_probs=172.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCeee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL   81 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~~   81 (257)
                      |++.|+++.+.||+++++...+.+.+..+|++...++++++..+...|++..   .......-|...+.+.+++.|+...
T Consensus        31 l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~  107 (250)
T 2c4n_A           31 IMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQ---EGKKAYVVGEGALIHELYKAGFTIT  107 (250)
T ss_dssp             HHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHHTS---SCCEEEEECCTHHHHHHHHTTCEEC
T ss_pred             HHHcCCcEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHHHHHHHHHhc---CCCEEEEEcCHHHHHHHHHcCCccc
Confidence            5688999999999999999999999999999988888999888777887643   2356777888889999999998764


Q ss_pred             CCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHH
Q 025117           82 GGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG  161 (257)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~  161 (257)
                      .                    ...++++.+.+..+.|..+..+...+.  .+...++||.+ .. ....+.  ..|.+..
T Consensus       108 ~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~t~~~-~~-~~~~~~--~~~~~~~  161 (250)
T 2c4n_A          108 D--------------------VNPDFVIVGETRSYNWDMMHKAAYFVA--NGARFIATNPD-TH-GRGFYP--ACGALCA  161 (250)
T ss_dssp             S--------------------SSCSEEEECCCTTCCHHHHHHHHHHHH--TTCEEEESCCC-SB-SSTTCB--CHHHHHH
T ss_pred             C--------------------CCCCEEEEeCCCCCCHHHHHHHHHHHH--CCCEEEEECCC-CC-CCCeee--cchHHHH
Confidence            1                    235678888888889998887776665  47788899987 22 222222  2333434


Q ss_pred             HHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcE
Q 025117          162 AFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDF  241 (257)
Q Consensus       162 ~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~  241 (257)
                      .+....+.+....+||+|..|+.+++++|++|++|++|||++.+||.+|+.+|+.+++|.+|.+..+++..  ....|++
T Consensus       162 ~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~--~~~~~~~  239 (250)
T 2c4n_A          162 GIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDS--MPFRPSW  239 (250)
T ss_dssp             HHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSS--CSSCCSE
T ss_pred             HHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhh--cCCCCCE
Confidence            44444555666779999999999999999999999999999559999999999999999999887666542  2257999


Q ss_pred             EECChhhHHH
Q 025117          242 YTNKISDFLS  251 (257)
Q Consensus       242 ~~~~l~el~~  251 (257)
                      +++++.||.+
T Consensus       240 v~~~~~el~~  249 (250)
T 2c4n_A          240 IYPSVAEIDV  249 (250)
T ss_dssp             EESSGGGCCC
T ss_pred             EECCHHHhhc
Confidence            9999998753

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.90  E-value=3.8e-22  Score=167.49  Aligned_cols=223  Identities=22%  Similarity=0.286  Sum_probs=172.0

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCeee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL   81 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~~   81 (257)
                      |++.|+++.++||+++++...+.+.+.++|++...++++++......++....    ...++++.++..+.++....   
T Consensus        44 l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~---  116 (271)
T 2x4d_A           44 LKRSRLKVRFCTNESAASRAELVGQLQRLGFDISEQEVTAPAPAACQILKERG----LRPYLLIHDGVRSEFDQIDT---  116 (271)
T ss_dssp             HHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCCCGGGEECHHHHHHHHHHHHT----CCEEEECCGGGGGGGTTSCC---
T ss_pred             HHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCCCHHHeecHHHHHHHHHHHcC----CEEEEEeCHHHHHHHHHcCC---
Confidence            67889999999999999999999999999999988999999888877776543    23567777777666554321   


Q ss_pred             CCCCCCCCccccCCCcccCCCCCccEEEEec-cCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH
Q 025117           82 GGPEDGGKKIELKPGFLMEHDKDVGAVVVGF-DRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV  160 (257)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~-d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~  160 (257)
                                           ..+..+++.. +....|+.+...+..++..++..++++|.+..... ......+.+.++
T Consensus       117 ---------------------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~  174 (271)
T 2x4d_A          117 ---------------------SNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAA-TSGLMLDVGPYM  174 (271)
T ss_dssp             ---------------------SSCSEEEECCCGGGCCHHHHHHHHHHHHHCSSCCEEEECCCSEEEE-TTEEEECHHHHH
T ss_pred             ---------------------CCCCEEEEecCCCCcCHHHHHHHHHHHHhcCCCeEEEEcCCccccc-CCCcccChhHHH
Confidence                                 1233444443 44567888888888887643677788888775532 234456667777


Q ss_pred             HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCc
Q 025117          161 GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD  240 (257)
Q Consensus       161 ~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd  240 (257)
                      ..+....+.+....+||+|.+|+.+++++|++|++|++|||+..+|+.+|+++|+.+++|.+|.+...+...  ....|+
T Consensus       175 ~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~--~~~~~~  252 (271)
T 2x4d_A          175 KALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHH--PEVKAD  252 (271)
T ss_dssp             HHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGC--SSCCCS
T ss_pred             HHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcc--cCCCCC
Confidence            766666666667789999999999999999999999999999339999999999999999999665443221  125699


Q ss_pred             EEECChhhHHHHHHh
Q 025117          241 FYTNKISDFLSLKAA  255 (257)
Q Consensus       241 ~~~~~l~el~~~l~~  255 (257)
                      ++++++.|+.+++..
T Consensus       253 ~~~~~~~el~~~l~~  267 (271)
T 2x4d_A          253 GYVDNLAEAVDLLLQ  267 (271)
T ss_dssp             EEESSHHHHHHHHHH
T ss_pred             EEeCCHHHHHHHHHh
Confidence            999999999988764

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.74  E-value=1.2e-18  Score=139.92  Aligned_cols=135  Identities=16%  Similarity=0.183  Sum_probs=100.2

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCcc--ccCCCcccccCchHHHHHHhccCC-CccccCCCcHHHHHHHHHHhCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVT--HLTDAQEWAGGGSMVGAFVGSTQR-EPLVVGKPSTFMMDYLANKFGIQ  192 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~--~~~~~~~~~~~g~~~~~i~~~~~~-~~~~~gKP~p~~~~~~~~~~~~~  192 (257)
                      ..++.+.++++.|++.+-.++|+||.....  .....+...|+..+|+.+..+... .....+||+|.+|+.+++++|++
T Consensus        34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~  113 (189)
T 3ib6_A           34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQID  113 (189)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCC
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCC
Confidence            467788899999987544577899987621  112233455666666555443321 11145899999999999999999


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCCh--hhhcCCCCCCCCcEEEC--ChhhHHHHHH
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL--SMLQSPNNSIQPDFYTN--KISDFLSLKA  254 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~--~~~~~~~~~~~pd~~~~--~l~el~~~l~  254 (257)
                      |++|+||||++.+||.+|+++||++++|.+|....  +.+.    ...|+++++  ++.+|.++++
T Consensus       114 ~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~----~~~~~~v~~~~~l~~l~~~l~  175 (189)
T 3ib6_A          114 KTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLP----LVAPPFVIPVWDLADVPEALL  175 (189)
T ss_dssp             GGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCC----BCSSSCEEEESSGGGHHHHHH
T ss_pred             cccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccc----cCCCcceeccccHHhHHHHHH
Confidence            99999999996699999999999999999987633  2222    148999999  9999988765

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.72  E-value=6.6e-18  Score=133.99  Aligned_cols=136  Identities=16%  Similarity=0.177  Sum_probs=97.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccC--------------CCcccccCchHHHHHHhc--cCCCccccCCCcH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLT--------------DAQEWAGGGSMVGAFVGS--TQREPLVVGKPST  179 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~--------------~~~~~~~~g~~~~~i~~~--~~~~~~~~gKP~p  179 (257)
                      ..|+.+.++++.|++.+..++|+||.+......              ..+...|  .+++.+..+  .+.+....+||+|
T Consensus        27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~KP~~  104 (179)
T 3l8h_A           27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCACRKPLP  104 (179)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSSSTTSS
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCCCCCCH
Confidence            457788899999987545578999987521100              0000111  111111100  0123345689999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      .+|+.+++++|++|++|+||||+. +||.+|+++|+++++|.+|....+....  ....||++++++.||.+++...
T Consensus       105 ~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~g~~~~~~~~~--~~~~~d~v~~~l~el~~~l~~~  178 (179)
T 3l8h_A          105 GMYRDIARRYDVDLAGVPAVGDSL-RDLQAAAQAGCAPWLVQTGNGRKTLAQG--GLPEGTRVCEDLAAVAEQLLQE  178 (179)
T ss_dssp             HHHHHHHHHHTCCCTTCEEEESSH-HHHHHHHHHTCEEEEESTTTHHHHHHHC--CCCTTEEEESSHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCcEEEECCCCcchhhhhc--ccCCCcEEecCHHHHHHHHHhc
Confidence            999999999999999999999995 9999999999999999999876665431  1247999999999999998764

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.71  E-value=2.7e-18  Score=139.76  Aligned_cols=130  Identities=12%  Similarity=0.100  Sum_probs=98.7

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..|++.+-...|+||.+.... ...+...|+..+|+.+..+..   ...+||+|++|..+++++|++|++|
T Consensus        85 ~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~-~~~l~~~~l~~~fd~~~~~~~---~~~~KP~p~~~~~a~~~lg~~p~e~  160 (216)
T 3kbb_A           85 ENPGVREALEFVKSKRIKLALATSTPQREA-LERLRRLDLEKYFDVMVFGDQ---VKNGKPDPEIYLLVLERLNVVPEKV  160 (216)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHHHTTCGGGCSEEECGGG---SSSCTTSTHHHHHHHHHHTCCGGGE
T ss_pred             cCccHHHHHHHHHHcCCCcccccCCcHHHH-HHHHHhcCCCccccccccccc---cCCCcccHHHHHHHHHhhCCCccce
Confidence            345677888888774445788899877442 223345677667665554443   3459999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEE-EccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLL-VLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~-V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      +||||+ .+||++|+++||++|+ |.+|.+..+.+..    ..++. +.++.++.+.|...
T Consensus       161 l~VgDs-~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~----~~~~~-i~~~~eli~~l~eL  215 (216)
T 3kbb_A          161 VVFEDS-KSGVEAAKSAGIERIYGVVHSLNDGKALLE----AGAVA-LVKPEEILNVLKEV  215 (216)
T ss_dssp             EEEECS-HHHHHHHHHTTCCCEEEECCSSSCCHHHHH----TTCSE-EECGGGHHHHHHHH
T ss_pred             EEEecC-HHHHHHHHHcCCcEEEEecCCCCCHHHHHh----CCCcE-ECCHHHHHHHHHHH
Confidence            999999 5999999999999996 8899888777654    34554 45788998888754

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.71  E-value=1.7e-17  Score=134.28  Aligned_cols=126  Identities=11%  Similarity=-0.019  Sum_probs=93.8

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCC-C
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK-S  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~-~  194 (257)
                      ..|+.+.+++..|++.+-.+.|+||+.....    ....+  .+++.+.+.   +....+||+|++|..+++++++.| +
T Consensus        36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~----~~~~~--~~~d~v~~~---~~~~~~KP~p~~~~~a~~~l~~~~~~  106 (196)
T 2oda_A           36 QLTPGAQNALKALRDQGMPCAWIDELPEALS----TPLAA--PVNDWMIAA---PRPTAGWPQPDACWMALMALNVSQLE  106 (196)
T ss_dssp             SBCTTHHHHHHHHHHHTCCEEEECCSCHHHH----HHHHT--TTTTTCEEC---CCCSSCTTSTHHHHHHHHHTTCSCST
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEcCChHHHH----HHhcC--ccCCEEEEC---CcCCCCCCChHHHHHHHHHcCCCCCc
Confidence            3468889999999874445788898866432    11222  233433332   333459999999999999999975 8


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCC-----------------------hhhhcCCCCCCCCcEEECChhhHHH
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTS-----------------------LSMLQSPNNSIQPDFYTNKISDFLS  251 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~-----------------------~~~~~~~~~~~~pd~~~~~l~el~~  251 (257)
                      +|+||||+ .+||++|+++||.+|+|.||.+.                       .+.+..    ..|+++++++.||.+
T Consensus       107 ~~v~VGDs-~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~----~~~d~vi~~~~eL~~  181 (196)
T 2oda_A          107 GCVLISGD-PRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYS----LGVHSVIDHLGELES  181 (196)
T ss_dssp             TCEEEESC-HHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH----TTCSEEESSGGGHHH
T ss_pred             cEEEEeCC-HHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHH----cCCCEEeCCHHHHHH
Confidence            99999999 59999999999999999998752                       112222    479999999999998


Q ss_pred             HHHh
Q 025117          252 LKAA  255 (257)
Q Consensus       252 ~l~~  255 (257)
                      ++..
T Consensus       182 ~l~~  185 (196)
T 2oda_A          182 CLAD  185 (196)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8754

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.70  E-value=5.1e-18  Score=138.06  Aligned_cols=125  Identities=18%  Similarity=0.187  Sum_probs=97.7

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .|+.+.+.+..|++ +-.+.|+||++.... ...+...|+..+|+.+....     ..+||+|++|..+++++|++|++|
T Consensus        85 ~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~-~~~l~~~gl~~~f~~i~~~~-----~~~Kp~p~~~~~~~~~lg~~p~~~  157 (210)
T 2ah5_A           85 LFPQIIDLLEELSS-SYPLYITTTKDTSTA-QDMAKNLEIHHFFDGIYGSS-----PEAPHKADVIHQALQTHQLAPEQA  157 (210)
T ss_dssp             ECTTHHHHHHHHHT-TSCEEEEEEEEHHHH-HHHHHHTTCGGGCSEEEEEC-----SSCCSHHHHHHHHHHHTTCCGGGE
T ss_pred             CCCCHHHHHHHHHc-CCeEEEEeCCCHHHH-HHHHHhcCchhheeeeecCC-----CCCCCChHHHHHHHHHcCCCcccE
Confidence            35667788888886 444679999876432 22334556666665554433     348999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      +||||+ .+||++|+++|+++|+|.+|....+++..    ..|+++++++.||.+++
T Consensus       158 ~~vgDs-~~Di~~a~~aG~~~i~v~~~~~~~~~l~~----~~a~~v~~~~~el~~~l  209 (210)
T 2ah5_A          158 IIIGDT-KFDMLGARETGIQKLAITWGFGEQADLLN----YQPDYIAHKPLEVLAYF  209 (210)
T ss_dssp             EEEESS-HHHHHHHHHHTCEEEEESSSSSCHHHHHT----TCCSEEESSTTHHHHHT
T ss_pred             EEECCC-HHHHHHHHHCCCcEEEEcCCCCCHHHHHh----CCCCEEECCHHHHHHHh
Confidence            999999 59999999999999999999876666543    46999999999998764

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.69  E-value=3.6e-17  Score=133.80  Aligned_cols=125  Identities=18%  Similarity=0.119  Sum_probs=98.8

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..+++. ..++++||.+..      +...|+..+|+.+....   ....+||+|.+|+.+++++|++|++|
T Consensus       106 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~------l~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~~~~~~~~  175 (230)
T 3vay_A          106 IFPEVQPTLEILAKT-FTLGVITNGNAD------VRRLGLADYFAFALCAE---DLGIGKPDPAPFLEALRRAKVDASAA  175 (230)
T ss_dssp             BCTTHHHHHHHHHTT-SEEEEEESSCCC------GGGSTTGGGCSEEEEHH---HHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred             cCcCHHHHHHHHHhC-CeEEEEECCchh------hhhcCcHHHeeeeEEcc---ccCCCCcCHHHHHHHHHHhCCCchhe
Confidence            456677888888864 567888998763      23445555554443322   23458999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhhC
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAAV  257 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~~  257 (257)
                      +||||++.+||.+|+++|+.+++|.+|....+.      ...|+++++++.||.+++++|.
T Consensus       176 ~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~------~~~~~~~~~~l~el~~~l~~~~  230 (230)
T 3vay_A          176 VHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA------DRLPDAEIHNLSQLPEVLARWA  230 (230)
T ss_dssp             EEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS------SSCCSEEESSGGGHHHHHHTTC
T ss_pred             EEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc------cCCCCeeECCHHHHHHHHHhhC
Confidence            999999549999999999999999998775443      2589999999999999998763

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.67  E-value=5.5e-17  Score=136.63  Aligned_cols=131  Identities=23%  Similarity=0.228  Sum_probs=100.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|++ +..++|+||.+.... ...+...|+..+|+.+..+...   ..+||+|.+|..+++++|++|++
T Consensus       121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~-~~~l~~~gl~~~f~~i~~~~~~---~~~KP~p~~~~~~~~~~~~~~~~  195 (260)
T 2gfh_A          121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQ-REKIEACACQSYFDAIVIGGEQ---KEEKPAPSIFYHCCDLLGVQPGD  195 (260)
T ss_dssp             CCCHHHHHHHHHHHT-TSEEEEEECSCHHHH-HHHHHHHTCGGGCSEEEEGGGS---SSCTTCHHHHHHHHHHHTCCGGG
T ss_pred             CCCcCHHHHHHHHHc-CCcEEEEECcChHHH-HHHHHhcCHHhhhheEEecCCC---CCCCCCHHHHHHHHHHcCCChhh
Confidence            467889999999986 456789999987542 2234556777777655444333   34899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCC-eEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          196 ICMVGDRLDTDILFGQNGGC-KTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~-~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      |+||||+..+||.+|+++|+ .+++|.++....+ .    ....|+++++++.||.+++...
T Consensus       196 ~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~-~----~~~~~~~~i~~~~el~~~l~~~  252 (260)
T 2gfh_A          196 CVMVGDTLETDIQGGLNAGLKATVWINKSGRVPL-T----SSPMPHYMVSSVLELPALLQSI  252 (260)
T ss_dssp             EEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCS-S----CCCCCSEEESSGGGHHHHHHHH
T ss_pred             EEEECCCchhhHHHHHHCCCceEEEEcCCCCCcC-c----ccCCCCEEECCHHHHHHHHHHH
Confidence            99999964699999999999 8999987643211 1    1257999999999999988653

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.67  E-value=8.8e-17  Score=133.07  Aligned_cols=130  Identities=12%  Similarity=0.064  Sum_probs=101.9

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH--HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCC
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV--GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS  194 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~--~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~  194 (257)
                      .++.+.+.+..+++.+-.+.|+||.+.... ...+.. ++..+|  +.+...   +....+||+|.+|+.+++++|++|+
T Consensus       110 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~l~~-~l~~~f~~d~i~~~---~~~~~~kp~~~~~~~~~~~lg~~~~  184 (243)
T 3qxg_A          110 RMPGAWELLQKVKSEGLTPMVVTGSGQLSL-LERLEH-NFPGMFHKELMVTA---FDVKYGKPNPEPYLMALKKGGLKAD  184 (243)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECCCCCHHH-HTTHHH-HSTTTCCGGGEECT---TTCSSCTTSSHHHHHHHHHTTCCGG
T ss_pred             CCCCHHHHHHHHHHcCCcEEEEeCCcHHHH-HHHHHH-hHHHhcCcceEEeH---HhCCCCCCChHHHHHHHHHcCCCHH
Confidence            455677788888874445778899876442 223344 655555  444433   3344699999999999999999999


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      +|+||||+ .+|+.+|+++|+.+++|.+|....+.+..    ..||++++++.||.++++..
T Consensus       185 ~~i~vGD~-~~Di~~a~~aG~~~i~v~~~~~~~~~l~~----~~ad~v~~s~~el~~~l~~l  241 (243)
T 3qxg_A          185 EAVVIENA-PLGVEAGHKAGIFTIAVNTGPLDGQVLLD----AGADLLFPSMQTLCDSWDTI  241 (243)
T ss_dssp             GEEEEECS-HHHHHHHHHTTCEEEEECCSSSCHHHHHH----TTCSEEESCHHHHHHHHHHH
T ss_pred             HeEEEeCC-HHHHHHHHHCCCEEEEEeCCCCCHHHHHh----cCCCEEECCHHHHHHHHHhh
Confidence            99999999 59999999999999999999887776543    47999999999999998764

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.67  E-value=7.6e-18  Score=140.41  Aligned_cols=124  Identities=11%  Similarity=0.040  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEE
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC  197 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  197 (257)
                      ++.+.+.+..|++.+-.+.++||.....   ..+...|+..+|+.+..+....   .+||+|++|..+++++|++|++|+
T Consensus        97 ~pg~~~ll~~L~~~g~~i~i~t~~~~~~---~~l~~~gl~~~fd~i~~~~~~~---~~KP~p~~~~~a~~~lg~~p~e~l  170 (243)
T 4g9b_A           97 LPGIRSLLADLRAQQISVGLASVSLNAP---TILAALELREFFTFCADASQLK---NSKPDPEIFLAACAGLGVPPQACI  170 (243)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCCCTTHH---HHHHHTTCGGGCSEECCGGGCS---SCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred             cccHHHHHHhhhcccccceecccccchh---hhhhhhhhcccccccccccccc---CCCCcHHHHHHHHHHcCCChHHEE
Confidence            4567788888887433466777765421   2345667777777665554444   499999999999999999999999


Q ss_pred             EEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHH
Q 025117          198 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSL  252 (257)
Q Consensus       198 ~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~  252 (257)
                      ||||+ .+||++|+++||++|+|.+|.+..+.+..    ..++..++++.++.+.
T Consensus       171 ~VgDs-~~di~aA~~aG~~~I~V~~g~~~ad~~~~----~~~~l~~~~l~~~~~~  220 (243)
T 4g9b_A          171 GIEDA-QAGIDAINASGMRSVGIGAGLTGAQLLLP----STESLTWPRLSAFWQN  220 (243)
T ss_dssp             EEESS-HHHHHHHHHHTCEEEEESTTCCSCSEEES----SGGGCCHHHHHHHHHH
T ss_pred             EEcCC-HHHHHHHHHcCCEEEEECCCCCcHHHhcC----ChhhcCHHHHHHHHHH
Confidence            99999 69999999999999999999765443322    2345555556655543

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.66  E-value=9.4e-17  Score=132.58  Aligned_cols=130  Identities=13%  Similarity=0.066  Sum_probs=99.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH--HHHHhccCCCccccCCCcHHHHHHHHHHhCCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV--GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK  193 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~--~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~  193 (257)
                      ..++.+.+.+..+++.+-.++|+||.+.... ...+.. ++..+|  +.+.....   ...+||+|.+|+.+++++|++|
T Consensus       108 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~l~~-~l~~~f~~~~~~~~~~---~~~~kp~~~~~~~~~~~lg~~~  182 (247)
T 3dv9_A          108 ERMPGALEVLTKIKSEGLTPMVVTGSGQTSL-LDRLNH-NFPGIFQANLMVTAFD---VKYGKPNPEPYLMALKKGGFKP  182 (247)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSCC---C-HHHHHH-HSTTTCCGGGEECGGG---CSSCTTSSHHHHHHHHHHTCCG
T ss_pred             CCCCCHHHHHHHHHHcCCcEEEEcCCchHHH-HHHHHh-hHHHhcCCCeEEeccc---CCCCCCCCHHHHHHHHHcCCCh
Confidence            3456677888888874445778899876432 112233 555555  44443333   3459999999999999999999


Q ss_pred             CcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          194 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       194 ~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      ++|+||||+ .+|+.+|+++|+.+++|.+|....+.+..    ..||++++++.||.+++..
T Consensus       183 ~~~i~vGD~-~~Di~~a~~aG~~~i~v~~~~~~~~~l~~----~~ad~v~~~~~el~~~l~~  239 (247)
T 3dv9_A          183 NEALVIENA-PLGVQAGVAAGIFTIAVNTGPLHDNVLLN----EGANLLFHSMPDFNKNWET  239 (247)
T ss_dssp             GGEEEEECS-HHHHHHHHHTTSEEEEECCSSSCHHHHHT----TTCSEEESSHHHHHHHHHH
T ss_pred             hheEEEeCC-HHHHHHHHHCCCeEEEEcCCCCCHHHHHh----cCCCEEECCHHHHHHHHHH
Confidence            999999999 59999999999999999999888777654    5799999999999988765

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.66  E-value=6.7e-19  Score=144.47  Aligned_cols=130  Identities=15%  Similarity=0.130  Sum_probs=93.8

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHH---HHHhCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYL---ANKFGIQ  192 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~---~~~~~~~  192 (257)
                      ..++.+.+.+..+++ +..++++||.+...... .+.  .++.+|+.+....   ....+||+|.+|..+   ++++|++
T Consensus        99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~-~l~--~l~~~fd~i~~~~---~~~~~KP~~~~~~~~l~~~~~lgi~  171 (240)
T 3smv_A           99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKL-SNA--KLGVEFDHIITAQ---DVGSYKPNPNNFTYMIDALAKAGIE  171 (240)
T ss_dssp             CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHH-HHT--TTCSCCSEEEEHH---HHTSCTTSHHHHHHHHHHHHHTTCC
T ss_pred             CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHH-HHH--hcCCccCEEEEcc---ccCCCCCCHHHHHHHHHHHHhcCCC
Confidence            456778888888886 44578889987643211 111  1333444333322   234589999999999   8899999


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeEEEEccCC-----CCh-hhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGV-----TSL-SMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~-----~~~-~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      |++|+||||++.+||.+|+++|+.++++.++.     +.. +..    ....||++++++.||.+++.+.
T Consensus       172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~----~~~~ad~v~~~~~el~~~l~~~  237 (240)
T 3smv_A          172 KKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPS----RMPNVDFRFNSMGEMAEAHKQA  237 (240)
T ss_dssp             GGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCS----SCCCCSEEESSHHHHHHHHHHH
T ss_pred             chhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCc----CCCCCCEEeCCHHHHHHHHHHH
Confidence            99999999995599999999999999998652     221 111    2268999999999999988764

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.65  E-value=5.1e-17  Score=132.74  Aligned_cols=132  Identities=17%  Similarity=0.105  Sum_probs=93.5

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCcc--------------ccCCCcccccCchHHHHHHhcc---------CCCcc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVT--------------HLTDAQEWAGGGSMVGAFVGST---------QREPL  172 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~--------------~~~~~~~~~~~g~~~~~i~~~~---------~~~~~  172 (257)
                      ..++.+.++++.|++.+-.++|+||.....              .....+...|+.  |+.+..+.         ..+..
T Consensus        50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~~  127 (211)
T 2gmw_A           50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQVC  127 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSCC
T ss_pred             cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCccC
Confidence            346788899999987544578889987311              001011112221  11111110         01224


Q ss_pred             ccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeE-EEEccCCCChhhhcCCCCCCCCcEEECChhhHHH
Q 025117          173 VVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT-LLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLS  251 (257)
Q Consensus       173 ~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~t-i~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~  251 (257)
                      ..+||+|.+|+.++++++++|++|+||||++ +||.+|+++|+++ ++|.+|....+...     ..|+++++++.||.+
T Consensus       128 ~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~-~Di~~a~~aG~~~~i~v~~g~~~~~~~~-----~~~d~vi~~l~el~~  201 (211)
T 2gmw_A          128 DCRKPHPGMLLSARDYLHIDMAASYMVGDKL-EDMQAAVAANVGTKVLVRTGKPITPEAE-----NAADWVLNSLADLPQ  201 (211)
T ss_dssp             SSSTTSCHHHHHHHHHHTBCGGGCEEEESSH-HHHHHHHHTTCSEEEEESSSSCCCHHHH-----HHCSEEESCGGGHHH
T ss_pred             cCCCCCHHHHHHHHHHcCCCHHHEEEEcCCH-HHHHHHHHCCCceEEEEecCCCcccccc-----CCCCEEeCCHHHHHH
Confidence            4699999999999999999999999999995 9999999999999 99999976544322     369999999999998


Q ss_pred             HHHh
Q 025117          252 LKAA  255 (257)
Q Consensus       252 ~l~~  255 (257)
                      ++..
T Consensus       202 ~l~~  205 (211)
T 2gmw_A          202 AIKK  205 (211)
T ss_dssp             HHHC
T ss_pred             HHHh
Confidence            8754

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.65  E-value=3.8e-17  Score=135.47  Aligned_cols=129  Identities=16%  Similarity=0.139  Sum_probs=96.4

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .|+.+.+.+..|++.+-.+.|+||.+.... ...+...++. +|+.+.+.   +....+||+|.+|..+++++|++|++|
T Consensus       111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~l~~~~l~-~f~~~~~~---~~~~~~Kp~p~~~~~~~~~l~~~~~~~  185 (240)
T 2hi0_A          111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAV-QVLVEELFPG-SFDFALGE---KSGIRRKPAPDMTSECVKVLGVPRDKC  185 (240)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEEEEEHHHH-HHHHHHHSTT-TCSEEEEE---CTTSCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             cCCCHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHHHcCCc-ceeEEEec---CCCCCCCCCHHHHHHHHHHcCCCHHHe
Confidence            345677888888763334668999865332 1122334444 44433332   234459999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +||||+ .+|+.+|+++|+.+|+|.+|....+++..    ..|+++++++.|+.+++..
T Consensus       186 ~~vGDs-~~Di~~a~~aG~~~v~v~~~~~~~~~~~~----~~a~~~~~~~~el~~~l~~  239 (240)
T 2hi0_A          186 VYIGDS-EIDIQTARNSEMDEIAVNWGFRSVPFLQK----HGATVIVDTAEKLEEAILG  239 (240)
T ss_dssp             EEEESS-HHHHHHHHHTTCEEEEESSSSSCHHHHHH----TTCCCEECSHHHHHHHHHT
T ss_pred             EEEcCC-HHHHHHHHHCCCeEEEECCCCCchhHHHh----cCCCEEECCHHHHHHHhcc
Confidence            999999 69999999999999999999876555532    3699999999999988764

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.65  E-value=8.3e-17  Score=131.88  Aligned_cols=130  Identities=17%  Similarity=0.099  Sum_probs=100.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+.+..+++.+-.++|+||.+.... ...+...|+..+|+.+...   +....+||+|.+|..+++++|++|++
T Consensus        99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~l~~~~l~~~f~~~~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~  174 (233)
T 3umb_A           99 SAFPENVPVLRQLREMGLPLGILSNGNPQML-EIAVKSAGMSGLFDHVLSV---DAVRLYKTAPAAYALAPRAFGVPAAQ  174 (233)
T ss_dssp             EECTTHHHHHHHHHTTTCCEEEEESSCHHHH-HHHHHTTTCTTTCSEEEEG---GGTTCCTTSHHHHTHHHHHHTSCGGG
T ss_pred             CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHH-HHHHHHCCcHhhcCEEEEe---cccCCCCcCHHHHHHHHHHhCCCccc
Confidence            4456778888888874445788899876432 2122344555555444333   23445999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      |+||||+ .+|+.+|+++|+.+++|.+|....+.+.     ..|+++++++.||.+++.+
T Consensus       175 ~~~vGD~-~~Di~~a~~~G~~~~~v~~~~~~~~~~~-----~~~~~v~~~~~el~~~l~~  228 (233)
T 3umb_A          175 ILFVSSN-GWDACGATWHGFTTFWINRLGHPPEALD-----VAPAAAGHDMRDLLQFVQA  228 (233)
T ss_dssp             EEEEESC-HHHHHHHHHHTCEEEEECTTCCCCCSSS-----CCCSEEESSHHHHHHHHHC
T ss_pred             EEEEeCC-HHHHHHHHHcCCEEEEEcCCCCCchhcc-----CCCCEEECCHHHHHHHHHH
Confidence            9999999 7999999999999999999876655443     5799999999999999875

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.64  E-value=7.8e-17  Score=132.52  Aligned_cols=130  Identities=19%  Similarity=0.180  Sum_probs=99.8

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..+++.+-.++|+||.+.... ...+...|+..+|+.+.   ..+....+||+|.+|+.+++++|++|++|
T Consensus       105 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~l~~~~l~~~f~~~~---~~~~~~~~kp~~~~~~~~~~~lg~~~~~~  180 (237)
T 4ex6_A          105 LYPGVLEGLDRLSAAGFRLAMATSKVEKAA-RAIAELTGLDTRLTVIA---GDDSVERGKPHPDMALHVARGLGIPPERC  180 (237)
T ss_dssp             BCTTHHHHHHHHHHTTEEEEEECSSCHHHH-HHHHHHHTGGGTCSEEE---CTTTSSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             cCCCHHHHHHHHHhCCCcEEEEcCCChHHH-HHHHHHcCchhheeeEE---eCCCCCCCCCCHHHHHHHHHHcCCCHHHe
Confidence            455677888888874334678899876432 22233445444444333   33445569999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +||||+ .+||.+|+++|+.+++|.+|....+.+..    ..|+++++++.||.++|.+
T Consensus       181 i~vGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~~~~----~~ad~v~~~~~el~~~l~~  234 (237)
T 4ex6_A          181 VVIGDG-VPDAEMGRAAGMTVIGVSYGVSGPDELMR----AGADTVVDSFPAAVTAVLD  234 (237)
T ss_dssp             EEEESS-HHHHHHHHHTTCEEEEESSSSSCHHHHHH----TTCSEEESSHHHHHHHHHH
T ss_pred             EEEcCC-HHHHHHHHHCCCeEEEEecCCCCHHHHHh----cCCCEEECCHHHHHHHHHc
Confidence            999999 49999999999999999999877666653    4799999999999999875

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.64  E-value=6e-17  Score=132.15  Aligned_cols=131  Identities=17%  Similarity=0.166  Sum_probs=100.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+.+..+++.+-..+|+||...... ...+...++..+|+.+...   +....+||+|.+|+.+++++|++|++
T Consensus        86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~l~~~~l~~~f~~~~~~---~~~~~~kp~~~~~~~~~~~lgi~~~~  161 (226)
T 3mc1_A           86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFS-KQILEHFKLAFYFDAIVGS---SLDGKLSTKEDVIRYAMESLNIKSDD  161 (226)
T ss_dssp             CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHH-HHHHHHTTCGGGCSEEEEE---CTTSSSCSHHHHHHHHHHHHTCCGGG
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHhCCHhheeeeecc---CCCCCCCCCHHHHHHHHHHhCcCccc
Confidence            3456677888888764345778898765332 2223344555555444333   33445999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      |++|||+ .+|+.+|+++|+.+++|.+|....+.+.+    ..||++++++.||.+++.+
T Consensus       162 ~i~iGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~~~~----~~ad~v~~s~~el~~~~~~  216 (226)
T 3mc1_A          162 AIMIGDR-EYDVIGALKNNLPSIGVTYGFGSYEELKN----AGANYIVNSVDELHKKILE  216 (226)
T ss_dssp             EEEEESS-HHHHHHHHTTTCCEEEESSSSSCHHHHHH----HTCSEEESSHHHHHHHHHT
T ss_pred             EEEECCC-HHHHHHHHHCCCCEEEEccCCCCHHHHHH----cCCCEEECCHHHHHHHHHH
Confidence            9999999 59999999999999999999888777632    4799999999999999875

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.64  E-value=7.7e-17  Score=134.76  Aligned_cols=120  Identities=7%  Similarity=0.000  Sum_probs=88.8

Q ss_pred             CHHHHHHHHHHHHcCCCce-EEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          117 NYYKVQYGTLCIRENPGCL-FIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~-~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      .++.+.+.+..|++ .++. .++||+...   ...+...|+..+|+.+.++...   ..+||+|++|..+++++|++|++
T Consensus       117 ~~p~~~~ll~~Lk~-~g~~i~i~~~~~~~---~~~L~~~gl~~~Fd~i~~~~~~---~~~KP~p~~~~~a~~~lg~~p~e  189 (250)
T 4gib_A          117 ILPGIESLLIDVKS-NNIKIGLSSASKNA---INVLNHLGISDKFDFIADAGKC---KNNKPHPEIFLMSAKGLNVNPQN  189 (250)
T ss_dssp             SCTTHHHHHHHHHH-TTCEEEECCSCTTH---HHHHHHHTCGGGCSEECCGGGC---CSCTTSSHHHHHHHHHHTCCGGG
T ss_pred             cchhHHHHHHHHHh-cccccccccccchh---hhHhhhcccccccceeeccccc---CCCCCcHHHHHHHHHHhCCChHH
Confidence            35567788888887 4554 444443321   1234556777777766554443   34999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhH-HHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF-LSLKA  254 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el-~~~l~  254 (257)
                      |+||||+ ..||++|+++||++|+|.+.    +.+      ..||++++++.|| ++.|+
T Consensus       190 ~l~VGDs-~~Di~aA~~aG~~~i~v~~~----~~~------~~ad~vi~~l~eL~~~~i~  238 (250)
T 4gib_A          190 CIGIEDA-SAGIDAINSANMFSVGVGNY----ENL------KKANLVVDSTNQLKFEYIQ  238 (250)
T ss_dssp             EEEEESS-HHHHHHHHHTTCEEEEESCT----TTT------TTSSEEESSGGGCCHHHHH
T ss_pred             eEEECCC-HHHHHHHHHcCCEEEEECCh----hHh------ccCCEEECChHhCCHHHHH
Confidence            9999999 59999999999999999542    222      3689999999998 55554

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.63  E-value=1.1e-16  Score=130.94  Aligned_cols=130  Identities=17%  Similarity=0.037  Sum_probs=100.2

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+...+..+++.+-..+|+||.+.... ...+...++..+++.+....   ....+||+|.+|+.+++++|++|++|
T Consensus        92 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~l~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~l~~~~~~~  167 (233)
T 3s6j_A           92 ALPGAVELLETLDKENLKWCIATSGGIDTA-TINLKALKLDINKINIVTRD---DVSYGKPDPDLFLAAAKKIGAPIDEC  167 (233)
T ss_dssp             ECTTHHHHHHHHHHTTCCEEEECSSCHHHH-HHHHHTTTCCTTSSCEECGG---GSSCCTTSTHHHHHHHHHTTCCGGGE
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEeCCchhhH-HHHHHhcchhhhhheeeccc---cCCCCCCChHHHHHHHHHhCCCHHHE
Confidence            445677788888874445778899876432 22233445555554443332   34459999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +||||+. .|+.+|+++|+.+++|.+|....+++..    ..||++++++.||.++++.
T Consensus       168 i~iGD~~-~Di~~a~~aG~~~i~v~~g~~~~~~l~~----~~ad~v~~~~~el~~~l~~  221 (233)
T 3s6j_A          168 LVIGDAI-WDMLAARRCKATGVGLLSGGYDIGELER----AGALRVYEDPLDLLNHLDE  221 (233)
T ss_dssp             EEEESSH-HHHHHHHHTTCEEEEEGGGSCCHHHHHH----TTCSEEESSHHHHHHTGGG
T ss_pred             EEEeCCH-HhHHHHHHCCCEEEEEeCCCCchHhHHh----cCCCEEECCHHHHHHHHHH
Confidence            9999995 9999999999999999999887777654    4699999999999998765

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.63  E-value=5.8e-17  Score=136.78  Aligned_cols=123  Identities=10%  Similarity=-0.022  Sum_probs=90.5

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcc---cccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQE---WAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ  192 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~---~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~  192 (257)
                      ..|+++.+++..|++.+-.++|+||.+.... ...+.   ..++..+|+.+   .+. ... +||+|.+|..+++++|++
T Consensus       130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~-~~~l~~~~~~~l~~~fd~i---~~~-~~~-~KP~p~~~~~~~~~lg~~  203 (261)
T 1yns_A          130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQ-KLLFGHSTEGDILELVDGH---FDT-KIG-HKVESESYRKIADSIGCS  203 (261)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHHTBTTBCCGGGCSEE---ECG-GGC-CTTCHHHHHHHHHHHTSC
T ss_pred             ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHH-HHHHHhhcccChHhhccEE---Eec-CCC-CCCCHHHHHHHHHHhCcC
Confidence            4677888999999864334678999987432 11111   22455555443   333 345 999999999999999999


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhH
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF  249 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el  249 (257)
                      |++|+||||+ .+||.+|+++||++|+|.++.....+...    ..|+++++++.||
T Consensus       204 p~~~l~VgDs-~~di~aA~~aG~~~i~v~~~~~~~~~~~~----~~~~~~i~~l~el  255 (261)
T 1yns_A          204 TNNILFLTDV-TREASAAEEADVHVAVVVRPGNAGLTDDE----KTYYSLITSFSEL  255 (261)
T ss_dssp             GGGEEEEESC-HHHHHHHHHTTCEEEEECCTTCCCCCHHH----HHHSCEESSGGGC
T ss_pred             cccEEEEcCC-HHHHHHHHHCCCEEEEEeCCCCCcccccc----cCCCEEECCHHHh
Confidence            9999999999 79999999999999999875433211111    3589999999987

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.63  E-value=1e-16  Score=134.86  Aligned_cols=130  Identities=13%  Similarity=0.006  Sum_probs=98.3

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .|+.+.+++..|++.+-.++|+||.+...  ...+...|+..+|+.+....   ....+||+|.+|..+++++|++|++|
T Consensus       107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~~--~~~l~~~gl~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~g~~~~~~  181 (263)
T 3k1z_A          107 VLDGAEDTLRECRTRGLRLAVISNFDRRL--EGILGGLGLREHFDFVLTSE---AAGWPKPDPRIFQEALRLAHMEPVVA  181 (263)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESCCTTH--HHHHHHTTCGGGCSCEEEHH---HHSSCTTSHHHHHHHHHHHTCCGGGE
T ss_pred             ECcCHHHHHHHHHhCCCcEEEEeCCcHHH--HHHHHhCCcHHhhhEEEeec---ccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence            45677888888887444577889976532  22334455555554443322   23459999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChh-hhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS-MLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~-~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +||||++.+||.+|+++|+.++++.+|..... .+..    ..|+++++++.||.++|..
T Consensus       182 ~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~----~~ad~v~~~l~el~~~l~~  237 (263)
T 3k1z_A          182 AHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDS----VPKEHILPSLAHLLPALDC  237 (263)
T ss_dssp             EEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHH----SCGGGEESSGGGHHHHHHH
T ss_pred             EEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhccc----CCCceEeCCHHHHHHHHHH
Confidence            99999955999999999999999999875443 2222    4799999999999998875

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.62  E-value=5.5e-17  Score=134.69  Aligned_cols=130  Identities=14%  Similarity=0.066  Sum_probs=94.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+.+..+++ ...++++||.+.... ...+...|+.  |+   .....+....+||+|.+|+.+++++|++|++
T Consensus       120 ~~~~~~~~~l~~l~~-~~~~~i~s~~~~~~~-~~~l~~~g~~--f~---~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~  192 (254)
T 3umc_A          120 RPWPDTLAGMHALKA-DYWLAALSNGNTALM-LDVARHAGLP--WD---MLLCADLFGHYKPDPQVYLGACRLLDLPPQE  192 (254)
T ss_dssp             EECTTHHHHHHHHTT-TSEEEECCSSCHHHH-HHHHHHHTCC--CS---EECCHHHHTCCTTSHHHHHHHHHHHTCCGGG
T ss_pred             CCCccHHHHHHHHHh-cCeEEEEeCCCHHHH-HHHHHHcCCC--cc---eEEeecccccCCCCHHHHHHHHHHcCCChHH
Confidence            345677788888876 355778899766432 1112222321  22   1122233446999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEc----cCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVL----SGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~----~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      |+||||+ .+||.+|+++|+.++++.    +|....+++.   ....||++++++.||.++|...
T Consensus       193 ~~~iGD~-~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~---~~~~ad~v~~~l~el~~~l~~~  253 (254)
T 3umc_A          193 VMLCAAH-NYDLKAARALGLKTAFIARPLEYGPGQSQDLA---AEQDWDLIASDLLDLHRQLAAS  253 (254)
T ss_dssp             EEEEESC-HHHHHHHHHTTCEEEEECCTTTTCTTCCSSSS---CSSCCSEEESSHHHHHHHHHC-
T ss_pred             EEEEcCc-hHhHHHHHHCCCeEEEEecCCccCCCCCcccc---cCCCCcEEECCHHHHHHHhccC
Confidence            9999999 799999999999999998    6766555541   1258999999999999998753

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.62  E-value=2.2e-16  Score=131.86  Aligned_cols=132  Identities=15%  Similarity=0.094  Sum_probs=100.3

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHH-HHhccCCCccc-cCCCcHHHHHHHHHHhCCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA-FVGSTQREPLV-VGKPSTFMMDYLANKFGIQK  193 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~-i~~~~~~~~~~-~gKP~p~~~~~~~~~~~~~~  193 (257)
                      ..++.+.+.+..+++.+-.+.|+||.+.... ...+...|+..+|+. +..   .+... .+||+|.+|+.+++++|++|
T Consensus       110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~l~~~~l~~~f~~~i~~---~~~~~~~~Kp~~~~~~~~~~~lgi~~  185 (259)
T 4eek_A          110 TAIEGAAETLRALRAAGVPFAIGSNSERGRL-HLKLRVAGLTELAGEHIYD---PSWVGGRGKPHPDLYTFAAQQLGILP  185 (259)
T ss_dssp             EECTTHHHHHHHHHHHTCCEEEECSSCHHHH-HHHHHHTTCHHHHCSCEEC---GGGGTTCCTTSSHHHHHHHHHTTCCG
T ss_pred             CcCccHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHhcChHhhccceEEe---HhhcCcCCCCChHHHHHHHHHcCCCH
Confidence            3455677788888764445778899876432 223344565555554 332   33444 69999999999999999999


Q ss_pred             CcEEEEcCChhhHHHHHHHcCCeEEEEccCCCC----hhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          194 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS----LSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       194 ~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~----~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      ++|+||||+. +|+.+|+++|+.+++|.+|...    .+++..    ..||++++++.||.++|...
T Consensus       186 ~~~i~iGD~~-~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~----~~ad~vi~~l~el~~~l~~~  247 (259)
T 4eek_A          186 ERCVVIEDSV-TGGAAGLAAGATLWGLLVPGHPHPDGAAALSR----LGAARVLTSHAELRAALAEA  247 (259)
T ss_dssp             GGEEEEESSH-HHHHHHHHHTCEEEEECCTTSCCSSCHHHHHH----HTCSEEECSHHHHHHHHHHT
T ss_pred             HHEEEEcCCH-HHHHHHHHCCCEEEEEccCCCcccccHHHHHh----cCcchhhCCHHHHHHHHHhc
Confidence            9999999995 9999999999999999998665    444432    46999999999999998764

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.62  E-value=2.3e-16  Score=130.49  Aligned_cols=132  Identities=20%  Similarity=0.162  Sum_probs=98.5

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..+++.+-.++|+||.+.... ...+...|+..+|+.+...   +....+||+|.+|..+++++|++|++|
T Consensus        95 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~l~~~~l~~~f~~~~~~---~~~~~~Kp~~~~~~~~~~~~g~~~~~~  170 (241)
T 2hoq_A           95 EVPGARKVLIRLKELGYELGIITDGNPVKQ-WEKILRLELDDFFEHVIIS---DFEGVKKPHPKIFKKALKAFNVKPEEA  170 (241)
T ss_dssp             BCTTHHHHHHHHHHHTCEEEEEECSCHHHH-HHHHHHTTCGGGCSEEEEG---GGGTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             CCccHHHHHHHHHHCCCEEEEEECCCchhH-HHHHHHcCcHhhccEEEEe---CCCCCCCCCHHHHHHHHHHcCCCcccE
Confidence            456677788888764445778899765432 2223344555555444332   233458999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +||||+..+|+.+|+++|+.+++|.+|....+....   ...|+++++++.||.+++..
T Consensus       171 i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~---~~~~~~~i~~~~el~~~l~~  226 (241)
T 2hoq_A          171 LMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEY---RKYADYEIDNLESLLEVLAR  226 (241)
T ss_dssp             EEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTT---GGGCSEEESSTTHHHHHHHH
T ss_pred             EEECCCchHhHHHHHHCCCEEEEECCCCCCcccccc---cCCCCEEECCHHHHHHHHHH
Confidence            999999449999999999999999998876655420   13699999999999998865

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.61  E-value=2.1e-16  Score=129.02  Aligned_cols=130  Identities=12%  Similarity=0.074  Sum_probs=97.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+.+..+++.+-.++|+||.+.... ...+...++..+|+.+...   +....+||+|.+|..+++++|++|++
T Consensus        96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~l~~~~l~~~f~~~~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~  171 (230)
T 3um9_A           96 TPFADVPQALQQLRAAGLKTAILSNGSRHSI-RQVVGNSGLTNSFDHLISV---DEVRLFKPHQKVYELAMDTLHLGESE  171 (230)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHTCGGGCSEEEEG---GGTTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHH-HHHHHHCCChhhcceeEeh---hhcccCCCChHHHHHHHHHhCCCccc
Confidence            4566778888888874445678899876432 2122334555455444333   23445999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      |+||||+ .+|+.+|+++|+.+++|.+|....+.+.     ..|+++++++.||.+++..
T Consensus       172 ~~~iGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~el~~~l~~  225 (230)
T 3um9_A          172 ILFVSCN-SWDATGAKYFGYPVCWINRSNGVFDQLG-----VVPDIVVSDVGVLASRFSP  225 (230)
T ss_dssp             EEEEESC-HHHHHHHHHHTCCEEEECTTSCCCCCSS-----CCCSEEESSHHHHHHTCCC
T ss_pred             EEEEeCC-HHHHHHHHHCCCEEEEEeCCCCcccccc-----CCCcEEeCCHHHHHHHHHH
Confidence            9999999 5999999999999999999865443332     5899999999999987643

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.61  E-value=2.2e-16  Score=139.93  Aligned_cols=136  Identities=19%  Similarity=0.159  Sum_probs=101.4

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHH--HHHhccCCC-------c-cccCCCcHHHHHHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG--AFVGSTQRE-------P-LVVGKPSTFMMDYL  185 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~--~i~~~~~~~-------~-~~~gKP~p~~~~~~  185 (257)
                      ..++.+.+.+..|++.+-.++|+||.+.... ...+...|+..+|+  .+.+.....       . ...+||+|.+|..+
T Consensus       215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~-~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a  293 (384)
T 1qyi_A          215 RPVDEVKVLLNDLKGAGFELGIATGRPYTET-VVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA  293 (384)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred             CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHH-HHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHH
Confidence            5689999999999875445788999976432 22334456655555  333322110       0 01489999999999


Q ss_pred             HHHhC--------------CCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCC---hhhhcCCCCCCCCcEEECChhh
Q 025117          186 ANKFG--------------IQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS---LSMLQSPNNSIQPDFYTNKISD  248 (257)
Q Consensus       186 ~~~~~--------------~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~---~~~~~~~~~~~~pd~~~~~l~e  248 (257)
                      +++++              ++|++|+||||++ +||.+|+++||.+|+|.+|...   .+++..    ..||++++++.|
T Consensus       294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~-~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~----~~ad~vi~sl~e  368 (384)
T 1qyi_A          294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATFIGTLTGLKGKDAAGELEA----HHADYVINHLGE  368 (384)
T ss_dssp             HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH-HHHHHHHHHTCEEEEESCBTTBGGGHHHHHH----TTCSEEESSGGG
T ss_pred             HHHcCCccccccccccccCCCCcCeEEEcCCH-HHHHHHHHcCCEEEEECCCccccccHHHHhh----cCCCEEECCHHH
Confidence            99999              8999999999995 9999999999999999998753   333322    469999999999


Q ss_pred             HHHHHHhhC
Q 025117          249 FLSLKAAAV  257 (257)
Q Consensus       249 l~~~l~~~~  257 (257)
                      |.+++..++
T Consensus       369 L~~~l~~~~  377 (384)
T 1qyi_A          369 LRGVLDNLL  377 (384)
T ss_dssp             HHHHHSCTT
T ss_pred             HHHHHHHHH
Confidence            999887653

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.60  E-value=1.6e-16  Score=133.34  Aligned_cols=130  Identities=13%  Similarity=-0.054  Sum_probs=94.1

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchH-HHHHHhccCCCccccCCCcHHHHHHHHHHhCCCC-C
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSM-VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK-S  194 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~-~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~-~  194 (257)
                      .++.+.+.+..+++.+-.++|+||.+.... ...+...++..+ ++.+   .+.+....+||+|.+|+.+++++|++| +
T Consensus       112 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~-~~~l~~~~~~~~~~~~~---~~~~~~~~~kp~~~~~~~~~~~lgi~~~~  187 (277)
T 3iru_A          112 LIPGWKEVFDKLIAQGIKVGGNTGYGPGMM-APALIAAKEQGYTPAST---VFATDVVRGRPFPDMALKVALELEVGHVN  187 (277)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHHHHHHTTCCCSEE---ECGGGSSSCTTSSHHHHHHHHHHTCSCGG
T ss_pred             cCcCHHHHHHHHHHcCCeEEEEeCCchHHH-HHHHHhcCcccCCCceE---ecHHhcCCCCCCHHHHHHHHHHcCCCCCc
Confidence            455677888888874445778899876332 111222222222 2222   222334558999999999999999999 9


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCC-----------------------hhhhcCCCCCCCCcEEECChhhHHH
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTS-----------------------LSMLQSPNNSIQPDFYTNKISDFLS  251 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~-----------------------~~~~~~~~~~~~pd~~~~~l~el~~  251 (257)
                      +|+||||+ .+||.+|+++|+.+++|.+|.+.                       .+++..    ..||++++++.||.+
T Consensus       188 ~~i~vGD~-~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~ad~v~~~~~el~~  262 (277)
T 3iru_A          188 GCIKVDDT-LPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFN----AGAHYVIDSVADLET  262 (277)
T ss_dssp             GEEEEESS-HHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH----HTCSEEESSGGGTHH
T ss_pred             cEEEEcCC-HHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhh----CCCCEEecCHHHHHH
Confidence            99999999 59999999999999999999752                       233332    469999999999999


Q ss_pred             HHHh
Q 025117          252 LKAA  255 (257)
Q Consensus       252 ~l~~  255 (257)
                      ++..
T Consensus       263 ~l~~  266 (277)
T 3iru_A          263 VITD  266 (277)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8865

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.60  E-value=4.4e-16  Score=128.59  Aligned_cols=130  Identities=14%  Similarity=0.170  Sum_probs=96.4

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+.+..+++.+-..+|+||.+.... ...+...|+..+|+.+....   ....+||+|.+|..+++++|++|++
T Consensus       105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~l~~~~l~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~~~~~~~  180 (240)
T 2no4_A          105 SAYPDAAETLEKLKSAGYIVAILSNGNDEML-QAALKASKLDRVLDSCLSAD---DLKIYKPDPRIYQFACDRLGVNPNE  180 (240)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHTTCGGGCSEEEEGG---GTTCCTTSHHHHHHHHHHHTCCGGG
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHhcCcHHHcCEEEEcc---ccCCCCCCHHHHHHHHHHcCCCccc
Confidence            3456777888888874445778899876432 22233445555554443332   2345999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCC-cEEECChhhHHHHHHhh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP-DFYTNKISDFLSLKAAA  256 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~p-d~~~~~l~el~~~l~~~  256 (257)
                      |+||||+ .+|+.+|+++|+.+++|.+|.. .+.+     ...| +++++++.||.+++.++
T Consensus       181 ~~~iGD~-~~Di~~a~~aG~~~~~v~~~~~-~~~~-----~~~~~~~~~~~~~el~~~l~~~  235 (240)
T 2no4_A          181 VCFVSSN-AWDLGGAGKFGFNTVRINRQGN-PPEY-----EFAPLKHQVNSLSELWPLLAKN  235 (240)
T ss_dssp             EEEEESC-HHHHHHHHHHTCEEEEECTTCC-CCCC-----TTSCCSEEESSGGGHHHHHCC-
T ss_pred             EEEEeCC-HHHHHHHHHCCCEEEEECCCCC-CCcc-----cCCCCceeeCCHHHHHHHHHHh
Confidence            9999999 6999999999999999999865 2222     2468 99999999999988654

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.59  E-value=6.7e-16  Score=126.50  Aligned_cols=128  Identities=23%  Similarity=0.260  Sum_probs=96.5

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..|++.+-.++|+||.+.... ...+...|+..+|+.+.   +.+....+||+|.+|..+++++|++|++|
T Consensus        84 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~l~~~gl~~~f~~i~---~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~  159 (222)
T 2nyv_A           84 PYPEIPYTLEALKSKGFKLAVVSNKLEELS-KKILDILNLSGYFDLIV---GGDTFGEKKPSPTPVLKTLEILGEEPEKA  159 (222)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHHHTTCGGGCSEEE---CTTSSCTTCCTTHHHHHHHHHHTCCGGGE
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEcCCCHHHH-HHHHHHcCCHHHheEEE---ecCcCCCCCCChHHHHHHHHHhCCCchhE
Confidence            456677888888864334678899876432 22233445544444333   33334568999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      +||||+ .+|+.+|+++|+.+++|.+|....+.       ..|+++++++.|+.+++...
T Consensus       160 ~~vGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~-------~~~~~~~~~~~el~~~l~~~  211 (222)
T 2nyv_A          160 LIVGDT-DADIEAGKRAGTKTALALWGYVKLNS-------QIPDFTLSRPSDLVKLMDNH  211 (222)
T ss_dssp             EEEESS-HHHHHHHHHHTCEEEEETTSSCSCCC-------CCCSEEESSTTHHHHHHHTT
T ss_pred             EEECCC-HHHHHHHHHCCCeEEEEcCCCCCccc-------cCCCEEECCHHHHHHHHHHh
Confidence            999999 79999999999999999998754322       46999999999999988653

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.59  E-value=5.1e-16  Score=127.10  Aligned_cols=130  Identities=15%  Similarity=0.111  Sum_probs=98.0

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+.+..+++. ...+|+||.+.... ...+...|+..+|+.+...   +....+||+|.+|+.+++++|++|++
T Consensus       100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~-~~~l~~~~~~~~f~~~~~~---~~~~~~kp~~~~~~~~~~~~~~~~~~  174 (234)
T 3u26_A          100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQA-MAFLDALGIKDLFDSITTS---EEAGFFKPHPRIFELALKKAGVKGEE  174 (234)
T ss_dssp             CBCTTHHHHHHHHTTT-SEEEEEESSCHHHH-HHHHHHTTCGGGCSEEEEH---HHHTBCTTSHHHHHHHHHHHTCCGGG
T ss_pred             CcCcCHHHHHHHHHhC-CcEEEEECCCHHHH-HHHHHHcCcHHHcceeEec---cccCCCCcCHHHHHHHHHHcCCCchh
Confidence            4556777888888875 55778899876432 1122334554444433322   22345999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      |+||||++.+||.+|+++|+.+++|.+|....+..      ..|+++++++.||.+++...
T Consensus       175 ~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~------~~a~~~~~~~~el~~~l~~~  229 (234)
T 3u26_A          175 AVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFW------DKCDFIVSDLREVIKIVDEL  229 (234)
T ss_dssp             EEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGG------GGCSEEESSTHHHHHHHHHH
T ss_pred             EEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccc------cCCCEeeCCHHHHHHHHHHH
Confidence            99999995499999999999999999986554332      26999999999999998764

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.59  E-value=6.2e-16  Score=126.78  Aligned_cols=129  Identities=17%  Similarity=0.135  Sum_probs=98.0

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhC-CCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFG-IQKS  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~-~~~~  194 (257)
                      ..++.+.+.+..+++. ..++|+||.+.... ...+...|+..+|+.+.....   ...+||+|.+|+.+++++| ++|+
T Consensus       103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~-~~~l~~~~l~~~f~~~~~~~~---~~~~kp~~~~~~~~~~~~g~~~~~  177 (238)
T 3ed5_A          103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQ-YKRLRDSGLFPFFKDIFVSED---TGFQKPMKEYFNYVFERIPQFSAE  177 (238)
T ss_dssp             CBCTTHHHHHHHHHTT-SEEEEEECSCHHHH-HHHHHHTTCGGGCSEEEEGGG---TTSCTTCHHHHHHHHHTSTTCCGG
T ss_pred             CCCccHHHHHHHHHhc-CeEEEEeCCCHHHH-HHHHHHcChHhhhheEEEecc---cCCCCCChHHHHHHHHHcCCCChh
Confidence            4566788888888875 56788899876432 222334455555554443332   3459999999999999999 9999


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +++||||++.+|+.+|+++|+.+++|.+|.....      ....|+++++++.||.+++.+
T Consensus       178 ~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~------~~~~ad~v~~~~~el~~~l~~  232 (238)
T 3ed5_A          178 HTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNV------PEIIPTYEIRKLEELYHILNI  232 (238)
T ss_dssp             GEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCT------TCCCCSEEESSGGGHHHHHTC
T ss_pred             HeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCc------ccCCCCeEECCHHHHHHHHHh
Confidence            9999999944999999999999999998853322      125799999999999998854

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.59  E-value=8.4e-16  Score=125.98  Aligned_cols=127  Identities=15%  Similarity=0.115  Sum_probs=95.5

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+...+..++ .+..++|+||.+.... ...+...++..+|+.+....   ....+||+|.+|+.+++++|++|++
T Consensus       107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~-~~~l~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~lgi~~~~  181 (240)
T 3qnm_A          107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQ-SRKMRSAGVDRYFKKIILSE---DLGVLKPRPEIFHFALSATQSELRE  181 (240)
T ss_dssp             CBSTTHHHHHHHHT-TTSEEEEEECSCHHHH-HHHHHHHTCGGGCSEEEEGG---GTTCCTTSHHHHHHHHHHTTCCGGG
T ss_pred             CcCccHHHHHHHHH-cCCeEEEEeCCchHHH-HHHHHHcChHhhceeEEEec---cCCCCCCCHHHHHHHHHHcCCCccc
Confidence            34566778888887 4445778899765432 22223445555554443332   3345999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      |+||||++.+|+.+|+++|+.++++.+|...  .     ....||++++++.|+.++.+
T Consensus       182 ~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~--~-----~~~~~d~vi~sl~e~~~~~~  233 (240)
T 3qnm_A          182 SLMIGDSWEADITGAHGVGMHQAFYNVTERT--V-----FPFQPTYHIHSLKELMNLLE  233 (240)
T ss_dssp             EEEEESCTTTTHHHHHHTTCEEEEECCSCCC--C-----CSSCCSEEESSTHHHHHHTC
T ss_pred             EEEECCCchHhHHHHHHcCCeEEEEcCCCCC--C-----cCCCCceEECCHHHHHHHHh
Confidence            9999999559999999999999999998751  1     12589999999999998754

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.59  E-value=5.9e-16  Score=124.51  Aligned_cols=125  Identities=18%  Similarity=0.231  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEE
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC  197 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  197 (257)
                      ++.+.+ +..|++. ..++|+||.+.... ...+...|+..+|+.+...   +....+||+|.+|..+++++|  |++|+
T Consensus        76 ~~~~~~-l~~l~~~-~~~~i~t~~~~~~~-~~~l~~~~l~~~f~~~~~~---~~~~~~Kp~~~~~~~~~~~~~--~~~~~  147 (201)
T 2w43_A           76 YEDTKY-LKEISEI-AEVYALSNGSINEV-KQHLERNGLLRYFKGIFSA---ESVKEYKPSPKVYKYFLDSIG--AKEAF  147 (201)
T ss_dssp             CGGGGG-HHHHHHH-SEEEEEESSCHHHH-HHHHHHTTCGGGCSEEEEG---GGGTCCTTCHHHHHHHHHHHT--CSCCE
T ss_pred             CCChHH-HHHHHhC-CeEEEEeCcCHHHH-HHHHHHCCcHHhCcEEEeh---hhcCCCCCCHHHHHHHHHhcC--CCcEE
Confidence            344556 6677664 55788899875432 2223345555555444332   233458999999999999999  99999


Q ss_pred             EEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          198 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       198 ~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      ||||+ ..|+.+|+++|+.+++|.+|....+.+.     ..|+++++++.||.+++..+
T Consensus       148 ~vGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~el~~~l~~~  200 (201)
T 2w43_A          148 LVSSN-AFDVIGAKNAGMRSIFVNRKNTIVDPIG-----GKPDVIVNDFKELYEWILRY  200 (201)
T ss_dssp             EEESC-HHHHHHHHHTTCEEEEECSSSCCCCTTS-----CCCSEEESSHHHHHHHHHHH
T ss_pred             EEeCC-HHHhHHHHHCCCEEEEECCCCCCccccC-----CCCCEEECCHHHHHHHHHhc
Confidence            99999 5899999999999999999765433222     47999999999999988764

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.58  E-value=4.4e-16  Score=128.50  Aligned_cols=128  Identities=18%  Similarity=0.238  Sum_probs=98.6

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC-CCc
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KSQ  195 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-~~~  195 (257)
                      .++.+.+.+..+++.+-..+|+||.+.... ...+...|+..+|+.+...   +....+||+|.+|+.+++++|++ |++
T Consensus       111 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~l~~~~l~~~f~~~~~~---~~~~~~kp~~~~~~~~~~~~g~~~~~~  186 (240)
T 3sd7_A          111 IYENMKEILEMLYKNGKILLVATSKPTVFA-ETILRYFDIDRYFKYIAGS---NLDGTRVNKNEVIQYVLDLCNVKDKDK  186 (240)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEEEEEHHHH-HHHHHHTTCGGGCSEEEEE---CTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred             cCccHHHHHHHHHHCCCeEEEEeCCcHHHH-HHHHHHcCcHhhEEEEEec---cccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence            455677888888874445778898765332 2223344555555544433   33445999999999999999999 999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      |++|||+ .+|+.+|+++|+.+++|.+|....+.+..    ..|+++++++.||.++|
T Consensus       187 ~i~vGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~~~~----~~ad~v~~~~~el~~~l  239 (240)
T 3sd7_A          187 VIMVGDR-KYDIIGAKKIGIDSIGVLYGYGSFEEISE----SEPTYIVENVESIKDIL  239 (240)
T ss_dssp             EEEEESS-HHHHHHHHHHTCEEEEESSSSCCHHHHHH----HCCSEEESSSTTHHHHH
T ss_pred             EEEECCC-HHHHHHHHHCCCCEEEEeCCCCCHHHHhh----cCCCEEECCHHHHHHHh
Confidence            9999999 59999999999999999999888776632    47999999999999876

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.58  E-value=4.8e-16  Score=127.46  Aligned_cols=129  Identities=16%  Similarity=0.155  Sum_probs=94.5

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..+++.+...+|+||.+.... ...+...++..+|+.+..   .+....+||+|.+|+.+++++|++|++|
T Consensus        96 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~l~~~~l~~~f~~~~~---~~~~~~~Kp~~~~~~~~~~~~~~~~~~~  171 (232)
T 1zrn_A           96 PFSEVPDSLRELKRRGLKLAILSNGSPQSI-DAVVSHAGLRDGFDHLLS---VDPVQVYKPDNRVYELAEQALGLDRSAI  171 (232)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHTTCGGGCSEEEE---SGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred             CCccHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHHhcChHhhhheEEE---ecccCCCCCCHHHHHHHHHHcCCCcccE
Confidence            456677888888874445778899876432 112233444444433322   2334469999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +||||+ .+|+.+|+++|+.++++.+|....+.+.     ..|+++++++.|+.+++..
T Consensus       172 ~~iGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~el~~~l~~  224 (232)
T 1zrn_A          172 LFVASN-AWDATGARYFGFPTCWINRTGNVFEEMG-----QTPDWEVTSLRAVVELFET  224 (232)
T ss_dssp             EEEESC-HHHHHHHHHHTCCEEEECTTCCCCCSSS-----CCCSEEESSHHHHHTTC--
T ss_pred             EEEeCC-HHHHHHHHHcCCEEEEEcCCCCCccccC-----CCCCEEECCHHHHHHHHHh
Confidence            999999 5999999999999999998865433322     4799999999999887654

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.57  E-value=5e-17  Score=133.30  Aligned_cols=133  Identities=15%  Similarity=0.160  Sum_probs=93.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccc--------------cCCCcccccCchHHHHHH-hccCC--------Ccc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTH--------------LTDAQEWAGGGSMVGAFV-GSTQR--------EPL  172 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~--------------~~~~~~~~~~g~~~~~i~-~~~~~--------~~~  172 (257)
                      ..++.+.+++..|++.+..++|+||......              ....+...|+.  ++.+. ...+.        +..
T Consensus        56 ~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~~~~~~~  133 (218)
T 2o2x_A           56 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIPDH  133 (218)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCSSC
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCceeecccCC
Confidence            3467788889999874455788999875210              00001111110  01000 10000        234


Q ss_pred             ccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeE-EEEccCCCChhhhcCCCCCCCCcEEECChhhHHH
Q 025117          173 VVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT-LLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLS  251 (257)
Q Consensus       173 ~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~t-i~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~  251 (257)
                      ..+||+|.+|+.++++++++|++++||||++ +||.+|+++|+++ ++|.+|....+...     ..|+++++++.||.+
T Consensus       134 ~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~-~Di~~a~~aG~~~~i~v~~g~~~~~~~~-----~~~~~~i~~l~el~~  207 (218)
T 2o2x_A          134 PMRKPNPGMLVEAGKRLALDLQRSLIVGDKL-ADMQAGKRAGLAQGWLVDGEAAVQPGFA-----IRPLRDSSELGDLLA  207 (218)
T ss_dssp             TTSTTSCHHHHHHHHHHTCCGGGCEEEESSH-HHHHHHHHTTCSEEEEETCCCEEETTEE-----EEEESSHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCH-HHHHHHHHCCCCEeEEEecCCCCccccc-----CCCCEecccHHHHHH
Confidence            5689999999999999999999999999995 9999999999999 99999976544322     469999999999999


Q ss_pred             HHHhh
Q 025117          252 LKAAA  256 (257)
Q Consensus       252 ~l~~~  256 (257)
                      ++...
T Consensus       208 ~l~~~  212 (218)
T 2o2x_A          208 AIETL  212 (218)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            88754

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.56  E-value=5.1e-16  Score=125.44  Aligned_cols=125  Identities=14%  Similarity=-0.002  Sum_probs=93.7

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..+++. ..++|+||...... ...+...|+..+|+.+....   ....+||+|.+|..+++++|++|++|
T Consensus        84 ~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~-~~~l~~~~l~~~f~~~~~~~---~~~~~KP~~~~~~~~~~~~~~~~~~~  158 (209)
T 2hdo_A           84 LYPGITSLFEQLPSE-LRLGIVTSQRRNEL-ESGMRSYPFMMRMAVTISAD---DTPKRKPDPLPLLTALEKVNVAPQNA  158 (209)
T ss_dssp             ECTTHHHHHHHSCTT-SEEEEECSSCHHHH-HHHHTTSGGGGGEEEEECGG---GSSCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             cCCCHHHHHHHHHhc-CcEEEEeCCCHHHH-HHHHHHcChHhhccEEEecC---cCCCCCCCcHHHHHHHHHcCCCcccE
Confidence            345667778888764 55778899875332 11223345444444333322   23458999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      +||||+ .+|+.+|+++|+.++++.+|....+.+.     . |+++++++.||.+++
T Consensus       159 i~vGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~~~-----~-a~~~~~~~~el~~~l  208 (209)
T 2hdo_A          159 LFIGDS-VSDEQTAQAANVDFGLAVWGMDPNADHQ-----K-VAHRFQKPLDILELF  208 (209)
T ss_dssp             EEEESS-HHHHHHHHHHTCEEEEEGGGCCTTGGGS-----C-CSEEESSGGGGGGGC
T ss_pred             EEECCC-hhhHHHHHHcCCeEEEEcCCCCChhhhc-----c-CCEEeCCHHHHHHhh
Confidence            999999 7999999999999999999976555443     3 999999999998765

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.56  E-value=5.8e-16  Score=128.63  Aligned_cols=129  Identities=14%  Similarity=0.090  Sum_probs=94.9

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCC--ccccCCCcHHHHHHHHHHhCCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQRE--PLVVGKPSTFMMDYLANKFGIQK  193 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~--~~~~gKP~p~~~~~~~~~~~~~~  193 (257)
                      ..++.+.+.+..+++.+-.++|+||.+............++..+|+   .....+  ....+||+|.+|+.+++++|++|
T Consensus       112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~---~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~  188 (250)
T 3l5k_A          112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFS---HIVLGDDPEVQHGKPDPDIFLACAKRFSPPP  188 (250)
T ss_dssp             CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSS---CEECTTCTTCCSCTTSTHHHHHHHHTSSSCC
T ss_pred             CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhee---eEEecchhhccCCCCChHHHHHHHHHcCCCC
Confidence            3556678888888874445778899875332111111223333333   333334  45569999999999999999988


Q ss_pred             --CcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          194 --SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       194 --~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                        ++|+||||+. +||.+|+++|+.+++|.+|....+ ..     ..||++++++.||.+++.
T Consensus       189 ~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~~~~~~~-~~-----~~ad~v~~sl~el~~~l~  244 (250)
T 3l5k_A          189 AMEKCLVFEDAP-NGVEAALAAGMQVVMVPDGNLSRD-LT-----TKATLVLNSLQDFQPELF  244 (250)
T ss_dssp             CGGGEEEEESSH-HHHHHHHHTTCEEEECCCTTSCGG-GS-----TTSSEECSCGGGCCGGGG
T ss_pred             CcceEEEEeCCH-HHHHHHHHcCCEEEEEcCCCCchh-hc-----ccccEeecCHHHhhHHHh
Confidence              9999999995 999999999999999999987654 22     579999999999976654

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.56  E-value=2.5e-15  Score=124.21  Aligned_cols=129  Identities=16%  Similarity=0.101  Sum_probs=94.6

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..+++. ..++++||.+.... ...+...|+.  |+.+   .+.+....+||+|.+|+.+++++|++|++
T Consensus       116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~-~~~l~~~~~~--f~~~---~~~~~~~~~kp~~~~~~~~~~~lgi~~~~  188 (254)
T 3umg_A          116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLL-LDMAKNAGIP--WDVI---IGSDINRKYKPDPQAYLRTAQVLGLHPGE  188 (254)
T ss_dssp             CBCTTHHHHHHHHHHH-SEEEECSSSCHHHH-HHHHHHHTCC--CSCC---CCHHHHTCCTTSHHHHHHHHHHTTCCGGG
T ss_pred             cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHH-HHHHHhCCCC--eeEE---EEcCcCCCCCCCHHHHHHHHHHcCCChHH
Confidence            4466777888888763 55778899875332 1112222321  2211   22223445999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEc----cCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVL----SGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~----~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      |+||||+ .+||.+|+++|+.++++.    +|....+++.   ....||++++++.||.++|..
T Consensus       189 ~~~iGD~-~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~---~~~~~d~~~~~~~el~~~l~~  248 (254)
T 3umg_A          189 VMLAAAH-NGDLEAAHATGLATAFILRPVEHGPHQTDDLA---PTGSWDISATDITDLAAQLRA  248 (254)
T ss_dssp             EEEEESC-HHHHHHHHHTTCEEEEECCTTTTCTTCCSCSS---CSSCCSEEESSHHHHHHHHHH
T ss_pred             EEEEeCC-hHhHHHHHHCCCEEEEEecCCcCCCCcccccc---ccCCCceEECCHHHHHHHhcC
Confidence            9999999 699999999999999998    6665555441   126899999999999999875

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.55  E-value=1e-15  Score=123.06  Aligned_cols=125  Identities=11%  Similarity=0.057  Sum_probs=94.0

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..+++.+-..+++||.+.... ...+...++..+|+.+....   ....+||+|.+|+.+++++|++|++|
T Consensus        90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~l~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~~~~~~~~  165 (214)
T 3e58_A           90 IFPDVLKVLNEVKSQGLEIGLASSSVKADI-FRALEENRLQGFFDIVLSGE---EFKESKPNPEIYLTALKQLNVQASRA  165 (214)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHTTCGGGCSEEEEGG---GCSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             cCchHHHHHHHHHHCCCCEEEEeCCcHHHH-HHHHHHcCcHhheeeEeecc---cccCCCCChHHHHHHHHHcCCChHHe
Confidence            355677888888874445778899876432 22333445555555443333   33459999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      ++|||+ .+|+.+|+++|+.++++.++......       ..|+++++++.||.++|
T Consensus       166 ~~iGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~-------~~a~~~~~~~~el~~~i  214 (214)
T 3e58_A          166 LIIEDS-EKGIAAGVAADVEVWAIRDNEFGMDQ-------SAAKGLLDSLTDVLDLI  214 (214)
T ss_dssp             EEEECS-HHHHHHHHHTTCEEEEECCSSSCCCC-------TTSSEEESSGGGGGGGC
T ss_pred             EEEecc-HhhHHHHHHCCCEEEEECCCCccchh-------ccHHHHHHHHHHHHhhC
Confidence            999999 69999999999999999987543321       47999999999998753

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.55  E-value=2.8e-15  Score=120.92  Aligned_cols=125  Identities=19%  Similarity=0.107  Sum_probs=94.7

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH--HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCC
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV--GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS  194 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~--~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~  194 (257)
                      .++.+.+.+..+++.+-.++|+||.+.... ...+...|+..+|  +.+.   +.+. ..+||+|.+|+.+++++|++|+
T Consensus        71 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~l~~~~l~~~f~~~~i~---~~~~-~~~kp~~~~~~~~~~~~g~~~~  145 (205)
T 3m9l_A           71 PAPGAVELVRELAGRGYRLGILTRNARELA-HVTLEAIGLADCFAEADVL---GRDE-APPKPHPGGLLKLAEAWDVSPS  145 (205)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHHHTTCGGGSCGGGEE---CTTT-SCCTTSSHHHHHHHHHTTCCGG
T ss_pred             CCccHHHHHHHHHhcCCeEEEEeCCchHHH-HHHHHHcCchhhcCcceEE---eCCC-CCCCCCHHHHHHHHHHcCCCHH
Confidence            345577788888874445778899876432 2233445555555  3333   2222 4699999999999999999999


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +|+||||+ .+|+.+|+++|+++|+|.+|....   .     ..||++++++.||.+.++.
T Consensus       146 ~~i~iGD~-~~Di~~a~~aG~~~i~v~~~~~~~---~-----~~ad~v~~~~~el~~~~~~  197 (205)
T 3m9l_A          146 RMVMVGDY-RFDLDCGRAAGTRTVLVNLPDNPW---P-----ELTDWHARDCAQLRDLLSA  197 (205)
T ss_dssp             GEEEEESS-HHHHHHHHHHTCEEEECSSSSCSC---G-----GGCSEECSSHHHHHHHHHH
T ss_pred             HEEEECCC-HHHHHHHHHcCCEEEEEeCCCCcc---c-----ccCCEEeCCHHHHHHHHHh
Confidence            99999999 599999999999999999986422   1     3589999999999998864

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.55  E-value=2.3e-15  Score=125.51  Aligned_cols=128  Identities=16%  Similarity=0.089  Sum_probs=94.0

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..++  +-.++|+||.+.... ...+...|+..+|+.+...   +....+||+|.+|..+++++|++|++|
T Consensus        94 ~~~~~~~~l~~l~--g~~~~i~t~~~~~~~-~~~l~~~gl~~~f~~~~~~---~~~~~~Kp~~~~~~~~~~~~~~~~~~~  167 (253)
T 1qq5_A           94 PYPDAAQCLAELA--PLKRAILSNGAPDML-QALVANAGLTDSFDAVISV---DAKRVFKPHPDSYALVEEVLGVTPAEV  167 (253)
T ss_dssp             BCTTHHHHHHHHT--TSEEEEEESSCHHHH-HHHHHHTTCGGGCSEEEEG---GGGTCCTTSHHHHHHHHHHHCCCGGGE
T ss_pred             CCccHHHHHHHHc--CCCEEEEeCcCHHHH-HHHHHHCCchhhccEEEEc---cccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence            4566777787776  344678899876432 2223344555555444333   234459999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEcc-----------------------CCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLS-----------------------GVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~-----------------------G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      +||||+ .+||.+|+++|+.++++.+                       |....+.     ....|+++++++.||.+++
T Consensus       168 ~~vGD~-~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~el~~~l  241 (253)
T 1qq5_A          168 LFVSSN-GFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREET-----YAEAPDFVVPALGDLPRLV  241 (253)
T ss_dssp             EEEESC-HHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCT-----TSCCCSEEESSGGGHHHHH
T ss_pred             EEEeCC-hhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCC-----CCCCCCeeeCCHHHHHHHH
Confidence            999999 6999999999999999998                       2221111     1257999999999999988


Q ss_pred             Hhh
Q 025117          254 AAA  256 (257)
Q Consensus       254 ~~~  256 (257)
                      ...
T Consensus       242 ~~~  244 (253)
T 1qq5_A          242 RGM  244 (253)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            654

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.54  E-value=9.8e-16  Score=127.32  Aligned_cols=127  Identities=22%  Similarity=0.318  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEE
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC  197 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  197 (257)
                      ++.+.+.+..|++.+-.++|+||.+.... ...+...|+..+|+.+.   +.+.....||+|.+|..+++++|++|++|+
T Consensus       116 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~l~~~gl~~~f~~~~---~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  191 (243)
T 2hsz_A          116 YPNVKETLEALKAQGYILAVVTNKPTKHV-QPILTAFGIDHLFSEML---GGQSLPEIKPHPAPFYYLCGKFGLYPKQIL  191 (243)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHHHTTCGGGCSEEE---CTTTSSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CCCHHHHHHHHHHCCCEEEEEECCcHHHH-HHHHHHcCchheEEEEE---ecccCCCCCcCHHHHHHHHHHhCcChhhEE
Confidence            45567788888764344678899876432 22233445544444332   233344589999999999999999999999


Q ss_pred             EEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          198 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       198 ~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      ||||+ ..|+.+|+++|+.+++|.+|.....+...    ..|+++++++.||.+++
T Consensus       192 ~vGD~-~~Di~~a~~aG~~~i~v~~g~~~~~~~~~----~~ad~vi~~~~el~~~l  242 (243)
T 2hsz_A          192 FVGDS-QNDIFAAHSAGCAVVGLTYGYNYNIPIAQ----SKPDWIFDDFADILKIT  242 (243)
T ss_dssp             EEESS-HHHHHHHHHHTCEEEEESSSCSTTCCGGG----GCCSEEESSGGGGGGGT
T ss_pred             EEcCC-HHHHHHHHHCCCeEEEEcCCCCchhhhhh----CCCCEEECCHHHHHHHh
Confidence            99999 59999999999999999998754333322    47999999999998765

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.53  E-value=4.3e-15  Score=121.65  Aligned_cols=125  Identities=16%  Similarity=0.121  Sum_probs=92.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCC-
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS-  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~-  194 (257)
                      ..++.+.+.+..+++.+-..+|+||.+.... ...+...|+..+|+.+.....   ...+||+|.+|+.+++++|++|+ 
T Consensus       103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~-~~~l~~~gl~~~f~~i~~~~~---~~~~Kp~~~~~~~~~~~lgi~~~~  178 (231)
T 3kzx_A          103 MLNDGAIELLDTLKENNITMAIVSNKNGERL-RSEIHHKNLTHYFDSIIGSGD---TGTIKPSPEPVLAALTNINIEPSK  178 (231)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEEHHHH-HHHHHHTTCGGGCSEEEEETS---SSCCTTSSHHHHHHHHHHTCCCST
T ss_pred             eECcCHHHHHHHHHHCCCeEEEEECCCHHHH-HHHHHHCCchhheeeEEcccc---cCCCCCChHHHHHHHHHcCCCccc
Confidence            3456677888888874445778899865432 223344555555554444333   34599999999999999999999 


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      +++||||+. +|+.+|+++|+.+|++.++..           ..|+++++++.||.++|...
T Consensus       179 ~~v~vGD~~-~Di~~a~~aG~~~v~~~~~~~-----------~~~~~~~~~~~el~~~l~~~  228 (231)
T 3kzx_A          179 EVFFIGDSI-SDIQSAIEAGCLPIKYGSTNI-----------IKDILSFKNFYDIRNFICQL  228 (231)
T ss_dssp             TEEEEESSH-HHHHHHHHTTCEEEEECC----------------CCEEESSHHHHHHHHHHH
T ss_pred             CEEEEcCCH-HHHHHHHHCCCeEEEECCCCC-----------CCCceeeCCHHHHHHHHHHH
Confidence            999999995 999999999999999965532           36899999999999998764

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.53  E-value=2.9e-15  Score=122.40  Aligned_cols=130  Identities=12%  Similarity=0.026  Sum_probs=93.6

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCC---CccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCC
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRD---AVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK  193 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d---~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~  193 (257)
                      .++.+.+.+..+++.+-...++||.+   .... ...+...++..+|+.+...   +....+||+|.+|..+++++|++|
T Consensus       100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~l~~~~l~~~f~~~~~~---~~~~~~kp~~~~~~~~~~~lgi~~  175 (235)
T 2om6_A          100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYT-RLLLERFGLMEFIDKTFFA---DEVLSYKPRKEMFEKVLNSFEVKP  175 (235)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHH-HHHHHHTTCGGGCSEEEEH---HHHTCCTTCHHHHHHHHHHTTCCG
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCcccchhHH-HHHHHhCCcHHHhhhheec---cccCCCCCCHHHHHHHHHHcCCCc
Confidence            36778888888887444467889987   3211 1112223444443333222   123358999999999999999999


Q ss_pred             CcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          194 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       194 ~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      ++|++|||+...|+.+|+++|+.++++.+|. ...++.     ..|+++++++.||.++++..
T Consensus       176 ~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~el~~~l~~~  232 (235)
T 2om6_A          176 EESLHIGDTYAEDYQGARKVGMWAVWINQEG-DKVRKL-----EERGFEIPSIANLKDVIELI  232 (235)
T ss_dssp             GGEEEEESCTTTTHHHHHHTTSEEEEECTTC-CSCEEE-----ETTEEEESSGGGHHHHHHHT
T ss_pred             cceEEECCChHHHHHHHHHCCCEEEEECCCC-CCcccC-----CCCcchHhhHHHHHHHHHHH
Confidence            9999999994389999999999999999984 332322     25899999999999988764

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.52  E-value=5.8e-15  Score=125.04  Aligned_cols=136  Identities=12%  Similarity=0.100  Sum_probs=97.5

Q ss_pred             CCHHHHHHHHHHHHcCCC--ceEEEecCCCccccCCCcccccCchHHHHHHhccCCC-ccccCCCcHHHHHHHHHHhCCC
Q 025117          116 FNYYKVQYGTLCIRENPG--CLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQRE-PLVVGKPSTFMMDYLANKFGIQ  192 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~--~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~~gKP~p~~~~~~~~~~~~~  192 (257)
                      ..++.+.+.+..+++.+-  .++|+||.+.... ...+...|+..+|+.+.++.... ....+||+|.+|+.+++++|++
T Consensus       142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~-~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~  220 (282)
T 3nuq_A          142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHA-IRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLA  220 (282)
T ss_dssp             CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHH-HHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCC
T ss_pred             CcChhHHHHHHHHHhCCCCceEEEEECCChHHH-HHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCCC
Confidence            467889999999987444  5778899876432 22333455555555544332221 1256899999999999999999


Q ss_pred             C-CcEEEEcCChhhHHHHHHHcCC-eEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhhC
Q 025117          193 K-SQICMVGDRLDTDILFGQNGGC-KTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAAV  257 (257)
Q Consensus       193 ~-~~~~~IGD~~~~Di~~A~~aG~-~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~~  257 (257)
                      | ++|+||||+. +|+.+|+++|+ .++++.++..... ..   ....++++++++.||.+++...+
T Consensus       221 ~~~~~i~vGD~~-~Di~~a~~aG~~~~~~~~~~~~~~~-~~---~~~~ad~vi~sl~el~~~l~~lf  282 (282)
T 3nuq_A          221 RYENAYFIDDSG-KNIETGIKLGMKTCIHLVENEVNEI-LG---QTPEGAIVISDILELPHVVSDLF  282 (282)
T ss_dssp             CGGGEEEEESCH-HHHHHHHHHTCSEEEEECSCCC-----C---CCCTTCEEESSGGGGGGTSGGGC
T ss_pred             CcccEEEEcCCH-HHHHHHHHCCCeEEEEEcCCccccc-cc---cCCCCCEEeCCHHHHHHHhhhhC
Confidence            9 9999999995 99999999999 5666766654322 11   12578999999999998876643

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.52  E-value=2e-15  Score=113.81  Aligned_cols=107  Identities=12%  Similarity=0.036  Sum_probs=76.9

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.++++.|++.+-.++|+||.+.... ...+...++..+|+.+...   .....+||+|.+|+.++++++++|+++
T Consensus        19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~-~~~l~~~~l~~~f~~i~~~---~~~~~~Kp~~~~~~~~~~~~~~~~~~~   94 (137)
T 2pr7_A           19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLG-AAPIRELETNGVVDKVLLS---GELGVEKPEEAAFQAAADAIDLPMRDC   94 (137)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCCGGG-GHHHHHHHHTTSSSEEEEH---HHHSCCTTSHHHHHHHHHHTTCCGGGE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHHHCChHhhccEEEEe---ccCCCCCCCHHHHHHHHHHcCCCcccE
Confidence            567788888888874444678899876442 1122223333333222221   123358999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS  228 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~  228 (257)
                      +||||++ .|+.+|+++|+.++++.+|....+
T Consensus        95 ~~vgD~~-~di~~a~~~G~~~i~~~~~~~~~~  125 (137)
T 2pr7_A           95 VLVDDSI-LNVRGAVEAGLVGVYYQQFDRAVV  125 (137)
T ss_dssp             EEEESCH-HHHHHHHHHTCEEEECSCHHHHHH
T ss_pred             EEEcCCH-HHHHHHHHCCCEEEEeCChHHHHH
Confidence            9999994 899999999999999998754433

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.52  E-value=1.1e-14  Score=119.18  Aligned_cols=132  Identities=14%  Similarity=0.090  Sum_probs=97.0

Q ss_pred             CHHHHHHHHHHHHcCCCc-eEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhC--CCC
Q 025117          117 NYYKVQYGTLCIRENPGC-LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFG--IQK  193 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~--~~~  193 (257)
                      .++.+.+.+..+++.+|. ..|+||...... ...+...++..+|+.+.  .+.+....+||.|.+|+.+++++|  ++|
T Consensus        94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~-~~~l~~~~l~~~f~~~~--~~~~~~~~~k~~~~~~~~~~~~lg~~~~~  170 (234)
T 2hcf_A           94 LLEGVRELLDALSSRSDVLLGLLTGNFEASG-RHKLKLPGIDHYFPFGA--FADDALDRNELPHIALERARRMTGANYSP  170 (234)
T ss_dssp             ECTTHHHHHHHHHTCTTEEEEEECSSCHHHH-HHHHHTTTCSTTCSCEE--CTTTCSSGGGHHHHHHHHHHHHHCCCCCG
T ss_pred             cCCCHHHHHHHHHhCCCceEEEEcCCcHHHH-HHHHHHCCchhhcCcce--ecCCCcCccchHHHHHHHHHHHhCCCCCc
Confidence            456677888888864144 678899876432 11223344444444221  222222246789999999999999  999


Q ss_pred             CcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          194 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       194 ~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      ++|+||||+. .|+.+|+++|+.+++|.+|....+.+..    ..|+++++++.||.+++...
T Consensus       171 ~~~i~iGD~~-~Di~~a~~aG~~~i~v~~~~~~~~~~~~----~~a~~v~~~~~el~~~l~~~  228 (234)
T 2hcf_A          171 SQIVIIGDTE-HDIRCARELDARSIAVATGNFTMEELAR----HKPGTLFKNFAETDEVLASI  228 (234)
T ss_dssp             GGEEEEESSH-HHHHHHHTTTCEEEEECCSSSCHHHHHT----TCCSEEESCSCCHHHHHHHH
T ss_pred             ccEEEECCCH-HHHHHHHHCCCcEEEEcCCCCCHHHHHh----CCCCEEeCCHHhHHHHHHHH
Confidence            9999999995 9999999999999999999877766543    46999999999999988753

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.48  E-value=4.6e-15  Score=120.80  Aligned_cols=128  Identities=18%  Similarity=0.097  Sum_probs=88.8

Q ss_pred             CCHHHHHHHHHHHHcCC-CceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCC
Q 025117          116 FNYYKVQYGTLCIRENP-GCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~-~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~  194 (257)
                      ..|+.+.+.+..+++.+ -.++++||.+.... ...+...++..+|+.+        ...+||+|.+|+.+++++|++|+
T Consensus       105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~-~~~l~~~~~~~~f~~~--------~~~~kpk~~~~~~~~~~lgi~~~  175 (234)
T 3ddh_A          105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQ-ENKLERSGLSPYFDHI--------EVMSDKTEKEYLRLLSILQIAPS  175 (234)
T ss_dssp             CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHH-HHHHHHHTCGGGCSEE--------EEESCCSHHHHHHHHHHHTCCGG
T ss_pred             CcCccHHHHHHHHHhCCCeEEEEEeCCchHHH-HHHHHHhCcHhhhhee--------eecCCCCHHHHHHHHHHhCCCcc
Confidence            34566777888887633 45678898765331 1122233433333222        23489999999999999999999


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      +|+||||++.+||.+|+++|+.+++|.+|......... .....|+++++++.||.++|
T Consensus       176 ~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~-~~~~~~d~v~~~l~el~~~l  233 (234)
T 3ddh_A          176 ELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTE-TFAHERLKQVKRLDDLLSLL  233 (234)
T ss_dssp             GEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC----CCCCTTEEECSSGGGHHHHC
T ss_pred             eEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcc-cccCCCceecccHHHHHHhc
Confidence            99999999449999999999999999666432111110 01245699999999999875

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.44  E-value=4.3e-14  Score=118.30  Aligned_cols=131  Identities=18%  Similarity=0.142  Sum_probs=90.6

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH-HHHHhccCCCccccCCCcHHHHHHHHHHhCCCC-C
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV-GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK-S  194 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~-~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~-~  194 (257)
                      .++.+.+.+..++..+-...++||.+.... ...+...++..++ +.+.   +.+....+||+|..|..+++++|++| +
T Consensus       104 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~l~~~~~~~~~~~~~~---~~~~~~~~kp~~~~~~~~~~~lgi~~~~  179 (267)
T 1swv_A          104 PINGVKEVIASLRERGIKIGSTTGYTREMM-DIVAKEAALQGYKPDFLV---TPDDVPAGRPYPWMCYKNAMELGVYPMN  179 (267)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEBCSSCHHHH-HHHHHHHHHTTCCCSCCB---CGGGSSCCTTSSHHHHHHHHHHTCCSGG
T ss_pred             cCccHHHHHHHHHHcCCeEEEEcCCCHHHH-HHHHHHcCCcccChHhee---cCCccCCCCCCHHHHHHHHHHhCCCCCc
Confidence            345666777777763334677888764321 1111111211111 1111   12223458999999999999999999 9


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCC-----------------------hhhhcCCCCCCCCcEEECChhhHHH
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTS-----------------------LSMLQSPNNSIQPDFYTNKISDFLS  251 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~-----------------------~~~~~~~~~~~~pd~~~~~l~el~~  251 (257)
                      +|++|||+ ..|+.+|+++|+.+++|.+|...                       .+++..    ..||++++++.||.+
T Consensus       180 ~~i~iGD~-~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ad~v~~~~~el~~  254 (267)
T 1swv_A          180 HMIKVGDT-VSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVE----NGAHFTIETMQELES  254 (267)
T ss_dssp             GEEEEESS-HHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH----TTCSEEESSGGGHHH
T ss_pred             CEEEEeCC-HHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHh----cCCceeccCHHHHHH
Confidence            99999999 59999999999999999999763                       233332    469999999999999


Q ss_pred             HHHhh
Q 025117          252 LKAAA  256 (257)
Q Consensus       252 ~l~~~  256 (257)
                      ++..+
T Consensus       255 ~l~~~  259 (267)
T 1swv_A          255 VMEHI  259 (267)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88653

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.44  E-value=3.3e-14  Score=115.12  Aligned_cols=130  Identities=12%  Similarity=0.090  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEE
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC  197 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  197 (257)
                      ++.+.+.+..+++.+....++||...... ...+...++..+++.+...   +....+||+|..|..+++++|++|++++
T Consensus        91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~i  166 (225)
T 3d6j_A           91 FPDTLPTLTHLKKQGIRIGIISTKYRFRI-LSFLRNHMPDDWFDIIIGG---EDVTHHKPDPEGLLLAIDRLKACPEEVL  166 (225)
T ss_dssp             CTTHHHHHHHHHHHTCEEEEECSSCHHHH-HHHHHTSSCTTCCSEEECG---GGCSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred             CcCHHHHHHHHHHCCCeEEEEECCCHHHH-HHHHHHcCchhheeeeeeh---hhcCCCCCChHHHHHHHHHhCCChHHeE
Confidence            34566677777653334667888765331 1111222333233222221   2233589999999999999999999999


Q ss_pred             EEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          198 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       198 ~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      +|||+ ..|+.+|+.+|+.+++|.+|....+++..    ..|+++++++.||.++++..
T Consensus       167 ~iGD~-~nDi~~~~~aG~~~~~~~~~~~~~~~l~~----~~ad~v~~~~~el~~~l~~~  220 (225)
T 3d6j_A          167 YIGDS-TVDAGTAAAAGVSFTGVTSGMTTAQEFQA----YPYDRIISTLGQLISVPEDK  220 (225)
T ss_dssp             EEESS-HHHHHHHHHHTCEEEEETTSSCCTTGGGG----SCCSEEESSGGGGC------
T ss_pred             EEcCC-HHHHHHHHHCCCeEEEECCCCCChHHHhh----cCCCEEECCHHHHHHhhhhh
Confidence            99999 59999999999999999998776655543    35899999999998887653

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.43  E-value=3.9e-14  Score=117.68  Aligned_cols=126  Identities=15%  Similarity=0.101  Sum_probs=88.3

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+.+..++ .+....|+||.+.... ...+...++..+|+.        ....+||+|.+|..+++++|++|++
T Consensus       112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~-~~~l~~~~l~~~f~~--------i~~~~kp~~~~~~~~~~~l~~~~~~  181 (251)
T 2pke_A          112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQ-EQKIEQSGLSDLFPR--------IEVVSEKDPQTYARVLSEFDLPAER  181 (251)
T ss_dssp             CBCTTHHHHHHHHH-TTSEEEEEEESCHHHH-HHHHHHHSGGGTCCC--------EEEESCCSHHHHHHHHHHHTCCGGG
T ss_pred             CcCccHHHHHHHHH-CCCEEEEEeCCCHHHH-HHHHHHcCcHHhCce--------eeeeCCCCHHHHHHHHHHhCcCchh
Confidence            34667788888887 4445678899765321 112222333323221        1234899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChh---h-hcCCCCCCCCcE-EECChhhHHHHHHh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS---M-LQSPNNSIQPDF-YTNKISDFLSLKAA  255 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~---~-~~~~~~~~~pd~-~~~~l~el~~~l~~  255 (257)
                      |++|||+...|+.+|+++|+.+++|.+|.....   + +.    ...|++ +++++.||.+++..
T Consensus       182 ~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~----~~~~~~~~i~~~~el~~~l~~  242 (251)
T 2pke_A          182 FVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVA----ADEPRLREVPDPSGWPAAVRA  242 (251)
T ss_dssp             EEEEESCCCCCCHHHHHTTCEEEECCCC-----------------CCTTEEECSSGGGHHHHHHH
T ss_pred             EEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccc----cCCCCeeeeCCHHHHHHHHHH
Confidence            999999933999999999999999998864321   1 21    257998 99999999988765

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.42  E-value=1.6e-14  Score=118.30  Aligned_cols=117  Identities=14%  Similarity=0.081  Sum_probs=78.5

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..|++.+-.+.|+||.+..   ...+...|+..+|+.+.   +.+....+||+|.+|+.+++++|++|++|
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~l~~~gl~~~f~~i~---~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  166 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRNA---PKILRRLAIIDDFHAIV---DPTTLAKGKPDPDIFLTAAAMLDVSPADC  166 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTTH---HHHHHHTTCTTTCSEEC---CC---------CCHHHHHHHHHTSCGGGE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchhH---HHHHHHcCcHhhcCEEe---eHhhCCCCCCChHHHHHHHHHcCCCHHHE
Confidence            4567788888888744457788987552   11233445544444333   33344569999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHH
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL  250 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~  250 (257)
                      +||||+ .+||.+|+++|+.++++.+.    +.+      ..||++++++.|+.
T Consensus       167 i~vGDs-~~Di~~a~~aG~~~~~~~~~----~~~------~~ad~v~~s~~el~  209 (233)
T 3nas_A          167 AAIEDA-EAGISAIKSAGMFAVGVGQG----QPM------LGADLVVRQTSDLT  209 (233)
T ss_dssp             EEEECS-HHHHHHHHHTTCEEEECC-----------------CSEECSSGGGCC
T ss_pred             EEEeCC-HHHHHHHHHcCCEEEEECCc----ccc------ccCCEEeCChHhCC
Confidence            999999 69999999999999999654    112      26999999999874

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.42  E-value=4.8e-14  Score=112.40  Aligned_cols=120  Identities=21%  Similarity=0.225  Sum_probs=89.8

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..+++.+...+++||...... . .+...++..+++.+...   +....+||+|.+|..+++++|++|+++
T Consensus        86 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~-~~~~~~~~~~f~~~~~~---~~~~~~Kp~~~~~~~~~~~~~i~~~~~  160 (207)
T 2go7_A           86 LMPGAREVLAWADESGIQQFIYTHKGNNAF-T-ILKDLGVESYFTEILTS---QSGFVRKPSPEAATYLLDKYQLNSDNT  160 (207)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCTHHH-H-HHHHHTCGGGEEEEECG---GGCCCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             eCcCHHHHHHHHHHCCCeEEEEeCCchHHH-H-HHHHcCchhheeeEEec---CcCCCCCCCcHHHHHHHHHhCCCcccE
Confidence            456677888888764344678888766432 2 22333443333322222   223358999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      ++|||+ ..|+.+|+++|+.++++.+|. .           .|+++++++.||.++++
T Consensus       161 ~~iGD~-~nDi~~~~~aG~~~i~~~~~~-~-----------~a~~v~~~~~el~~~l~  205 (207)
T 2go7_A          161 YYIGDR-TLDVEFAQNSGIQSINFLEST-Y-----------EGNHRIQALADISRIFE  205 (207)
T ss_dssp             EEEESS-HHHHHHHHHHTCEEEESSCCS-C-----------TTEEECSSTTHHHHHTS
T ss_pred             EEECCC-HHHHHHHHHCCCeEEEEecCC-C-----------CCCEEeCCHHHHHHHHh
Confidence            999999 799999999999999999875 3           38999999999998764

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.40  E-value=1.5e-13  Score=115.40  Aligned_cols=68  Identities=13%  Similarity=0.069  Sum_probs=57.3

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhH
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF  249 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el  249 (257)
                      +||+|++|..+++++|++|++|+||||+ ..||++|+++||++++|.++...  ....    ..|++++++|.||
T Consensus       186 ~KP~p~~~~~a~~~lg~~p~~~l~vgDs-~~di~aA~~aG~~~i~v~~~~~~--~~~~----~~~~~~i~~l~eL  253 (253)
T 2g80_A          186 KKTETQSYANILRDIGAKASEVLFLSDN-PLELDAAAGVGIATGLASRPGNA--PVPD----GQKYQVYKNFETL  253 (253)
T ss_dssp             CTTCHHHHHHHHHHHTCCGGGEEEEESC-HHHHHHHHTTTCEEEEECCTTSC--CCCS----SCCSCEESCSTTC
T ss_pred             CCCCHHHHHHHHHHcCCCcccEEEEcCC-HHHHHHHHHcCCEEEEEcCCCCC--Cccc----ccCCCccCChhhC
Confidence            5999999999999999999999999999 59999999999999999874322  1111    2488999999874

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.39  E-value=8.3e-14  Score=113.43  Aligned_cols=125  Identities=14%  Similarity=0.129  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH-HHHHhccCCCccccC--CCcHHHHHHHHHHhCCCCCc
Q 025117          119 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV-GAFVGSTQREPLVVG--KPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       119 ~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~-~~i~~~~~~~~~~~g--KP~p~~~~~~~~~~~~~~~~  195 (257)
                      +.+.+.+..++   ...+++||...... ...+...++..++ +.+....   ....+  ||+|..|+.+++++|++|++
T Consensus        90 ~~~~~~l~~l~---~~~~i~s~~~~~~~-~~~l~~~~l~~~~~~~~~~~~---~~~~~~~kpk~~~~~~~~~~l~~~~~~  162 (229)
T 2fdr_A           90 DGVKFALSRLT---TPRCICSNSSSHRL-DMMLTKVGLKPYFAPHIYSAK---DLGADRVKPKPDIFLHGAAQFGVSPDR  162 (229)
T ss_dssp             TTHHHHHHHCC---SCEEEEESSCHHHH-HHHHHHTTCGGGTTTCEEEHH---HHCTTCCTTSSHHHHHHHHHHTCCGGG
T ss_pred             cCHHHHHHHhC---CCEEEEECCChhHH-HHHHHhCChHHhccceEEecc---ccccCCCCcCHHHHHHHHHHcCCChhH
Confidence            34455555554   26778898866432 1122333444444 3332221   12347  99999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCC----hhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTS----LSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~----~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +++|||+ ..|+.+|+++|+.++++.++...    .+++.+    ..|+++++++.|+.++++.
T Consensus       163 ~i~iGD~-~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~----~~ad~v~~~~~el~~~l~~  221 (229)
T 2fdr_A          163 VVVVEDS-VHGIHGARAAGMRVIGFTGASHTYPSHADRLTD----AGAETVISRMQDLPAVIAA  221 (229)
T ss_dssp             EEEEESS-HHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHH----HTCSEEESCGGGHHHHHHH
T ss_pred             eEEEcCC-HHHHHHHHHCCCEEEEEecCCccchhhhHHHhh----cCCceeecCHHHHHHHHHH
Confidence            9999999 59999999999999999988653    222332    2489999999999988765

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.39  E-value=1.1e-13  Score=112.15  Aligned_cols=126  Identities=10%  Similarity=0.048  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEE
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC  197 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  197 (257)
                      ++.+.+.+..+++.+...+++||...... ...+...++..+++.+..   .+....+||+|..++.+++++|+++++++
T Consensus        96 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~l~~~~~~~~~~~~~~---~~~~~~~kp~~~~~~~~~~~~~i~~~~~i  171 (226)
T 1te2_A           96 LPGVREAVALCKEQGLLVGLASASPLHML-EKVLTMFDLRDSFDALAS---AEKLPYSKPHPQVYLDCAAKLGVDPLTCV  171 (226)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHTTCGGGCSEEEE---CTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred             CccHHHHHHHHHHCCCcEEEEeCCcHHHH-HHHHHhcCcHhhCcEEEe---ccccCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            44566777777764344677888765332 112223344333333322   22334589999999999999999999999


Q ss_pred             EEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          198 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       198 ~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      +|||+ ..|+.+|+.+|+.++++.+|....+...     ..|+++++++.||.+.+
T Consensus       172 ~iGD~-~nDi~~a~~aG~~~~~~~~~~~~~~~~~-----~~a~~v~~~~~el~~~~  221 (226)
T 1te2_A          172 ALEDS-VNGMIASKAARMRSIVVPAPEAQNDPRF-----VLANVKLSSLTELTAKD  221 (226)
T ss_dssp             EEESS-HHHHHHHHHTTCEEEECCCTTTTTCGGG-----GGSSEECSCGGGCCHHH
T ss_pred             EEeCC-HHHHHHHHHcCCEEEEEcCCCCcccccc-----cccCeEECCHHHHhHHH
Confidence            99999 5999999999999999999876544433     47999999999987643

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.39  E-value=1e-13  Score=113.62  Aligned_cols=109  Identities=12%  Similarity=0.070  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccC--CCc---ccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLT--DAQ---EWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ  192 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~--~~~---~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~  192 (257)
                      ++.+.+++..|++. ..++|+||.+......  ..+   ...++..+|+.+.   +.+....+||+|.+|+.+++++|++
T Consensus       114 ~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~---~~~~~~~~KP~~~~~~~~~~~~g~~  189 (229)
T 4dcc_A          114 PTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTY---LSYEMKMAKPEPEIFKAVTEDAGID  189 (229)
T ss_dssp             CHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEE---EHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred             cHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEE---eecccCCCCCCHHHHHHHHHHcCCC
Confidence            47788888888874 5578889987754210  111   2334444443332   2233456999999999999999999


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhc
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQ  231 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~  231 (257)
                      |++|+||||++ +||.+|+++|+.+++|.++....+.+.
T Consensus       190 ~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~~~~~k~~L~  227 (229)
T 4dcc_A          190 PKETFFIDDSE-INCKVAQELGISTYTPKAGEDWSHLFR  227 (229)
T ss_dssp             GGGEEEECSCH-HHHHHHHHTTCEEECCCTTCCGGGGGC
T ss_pred             HHHeEEECCCH-HHHHHHHHcCCEEEEECCHHHHHHHhh
Confidence            99999999995 999999999999999999876555543

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.38  E-value=6.4e-14  Score=115.30  Aligned_cols=124  Identities=16%  Similarity=0.133  Sum_probs=88.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+.+.+..|++.+ .++|+||.+.... ...+...|+..+|   ....     ..++|+|.+++.+++  +++|++
T Consensus        96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~-~~~l~~~gl~~~f---~~~~-----~~~~~K~~~~~~~~~--~~~~~~  163 (231)
T 2p11_A           96 RVYPGALNALRHLGARG-PTVILSDGDVVFQ-PRKIARSGLWDEV---EGRV-----LIYIHKELMLDQVME--CYPARH  163 (231)
T ss_dssp             GBCTTHHHHHHHHHTTS-CEEEEEECCSSHH-HHHHHHTTHHHHT---TTCE-----EEESSGGGCHHHHHH--HSCCSE
T ss_pred             CcCccHHHHHHHHHhCC-CEEEEeCCCHHHH-HHHHHHcCcHHhc---CeeE-----EecCChHHHHHHHHh--cCCCce
Confidence            45678889999998744 7889999877542 2223334443333   2211     123445678887776  789999


Q ss_pred             EEEEcCChhh---HHHHHHHcCCeEEEEccCCC--ChhhhcCCCCCC-CCcEEECChhhHHHHHHhh
Q 025117          196 ICMVGDRLDT---DILFGQNGGCKTLLVLSGVT--SLSMLQSPNNSI-QPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       196 ~~~IGD~~~~---Di~~A~~aG~~ti~V~~G~~--~~~~~~~~~~~~-~pd~~~~~l~el~~~l~~~  256 (257)
                      |+||||++ .   |+.+|+++|+++++|.+|..  ..+.+..    . .|+++++++.||.+++..+
T Consensus       164 ~~~vgDs~-~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~----~~~~~~~i~~~~el~~~l~~~  225 (231)
T 2p11_A          164 YVMVDDKL-RILAAMKKAWGARLTTVFPRQGHYAFDPKEISS----HPPADVTVERIGDLVEMDAEW  225 (231)
T ss_dssp             EEEECSCH-HHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHH----SCCCSEEESSGGGGGGCGGGG
T ss_pred             EEEEcCcc-chhhhhHHHHHcCCeEEEeCCCCCCCcchhccc----cCCCceeecCHHHHHHHHHHH
Confidence            99999995 6   99999999999999999854  3344432    3 4999999999998887665

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.36  E-value=3.2e-13  Score=108.37  Aligned_cols=108  Identities=16%  Similarity=0.055  Sum_probs=79.0

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCccc-ccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEW-AGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      .++.+.+.+..+++.+-.++|+||.+.... ...... .|+..+++.+..   ......+||+|.+|..+++++|++|++
T Consensus        92 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~-~~~~~~~~~l~~~f~~~~~---~~~~~~~Kp~~~~~~~~~~~~~~~~~~  167 (206)
T 2b0c_A           92 LRPEVIAIMHKLREQGHRVVVLSNTNRLHT-TFWPEEYPEIRDAADHIYL---SQDLGMRKPEARIYQHVLQAEGFSPSD  167 (206)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCCCCTT-SCCGGGCHHHHHHCSEEEE---HHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             cCccHHHHHHHHHHCCCeEEEEECCChHHH-HHHHHhccChhhheeeEEE---ecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence            467888889888864445788899876542 222222 344333333222   223345899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSM  229 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~  229 (257)
                      |+||||+ ..|+.+|+++|+.++++.++....+.
T Consensus       168 ~~~vgD~-~~Di~~a~~aG~~~~~~~~~~~~~~~  200 (206)
T 2b0c_A          168 TVFFDDN-ADNIEGANQLGITSILVKDKTTIPDY  200 (206)
T ss_dssp             EEEEESC-HHHHHHHHTTTCEEEECCSTTHHHHH
T ss_pred             eEEeCCC-HHHHHHHHHcCCeEEEecCCchHHHH
Confidence            9999999 58999999999999999987654433

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.35  E-value=6.2e-14  Score=112.29  Aligned_cols=109  Identities=17%  Similarity=0.080  Sum_probs=81.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+.+..+++.+ ..+|+||.+.... ...+...|+..+|+.+...   +....+||+|.+|..+++++|++|++
T Consensus        86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~-~~~l~~~~~~~~f~~~~~~---~~~~~~Kp~~~~~~~~~~~~~~~~~~  160 (200)
T 3cnh_A           86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLN-EYRIRTFGLGEFLLAFFTS---SALGVMKPNPAMYRLGLTLAQVRPEE  160 (200)
T ss_dssp             CBCHHHHHHHHHHTTTS-EEEEEECCCHHHH-HHHHHHHTGGGTCSCEEEH---HHHSCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             ccCccHHHHHHHHHHcC-CEEEEeCCcHHHH-HHHHHhCCHHHhcceEEee---cccCCCCCCHHHHHHHHHHcCCCHHH
Confidence            46788889999998755 7788899876432 1122333444333332222   22345899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML  230 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~  230 (257)
                      |+||||+ ..|+.+|+++|+.+++|.+|....+.+
T Consensus       161 ~~~vgD~-~~Di~~a~~aG~~~~~~~~~~~~~~~l  194 (200)
T 3cnh_A          161 AVMVDDR-LQNVQAARAVGMHAVQCVDAAQLREEL  194 (200)
T ss_dssp             EEEEESC-HHHHHHHHHTTCEEEECSCHHHHHHHH
T ss_pred             eEEeCCC-HHHHHHHHHCCCEEEEECCchhhHHHH
Confidence            9999999 589999999999999999987655554

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.32  E-value=1.8e-14  Score=117.71  Aligned_cols=122  Identities=14%  Similarity=0.046  Sum_probs=82.6

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..|++.+-.++|+||.+..  ....+...|+..+|+.+..+   +....+||+|.+|..+++++|++|   
T Consensus        96 ~~~~~~~~l~~l~~~g~~~~i~Tn~~~~--~~~~l~~~gl~~~f~~~~~~---~~~~~~Kp~~~~~~~~~~~~~~~~---  167 (220)
T 2zg6_A           96 LYDDTLEFLEGLKSNGYKLALVSNASPR--VKTLLEKFDLKKYFDALALS---YEIKAVKPNPKIFGFALAKVGYPA---  167 (220)
T ss_dssp             ECTTHHHHHHHHHTTTCEEEECCSCHHH--HHHHHHHHTCGGGCSEEC--------------CCHHHHHHHHHCSSE---
T ss_pred             ECcCHHHHHHHHHHCCCEEEEEeCCcHH--HHHHHHhcCcHhHeeEEEec---cccCCCCCCHHHHHHHHHHcCCCe---
Confidence            4567888888898643457788998652  22233445655555544333   334458999999999999999988   


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      +||||++.+|+.+|+++|+++++|.++...    ..    .  +++++++.||.+++.+.
T Consensus       168 ~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~----~~----~--~~~i~~l~el~~~l~~~  217 (220)
T 2zg6_A          168 VHVGDIYELDYIGAKRSYVDPILLDRYDFY----PD----V--RDRVKNLREALQKIEEM  217 (220)
T ss_dssp             EEEESSCCCCCCCSSSCSEEEEEBCTTSCC----TT----C--CSCBSSHHHHHHHHHHH
T ss_pred             EEEcCCchHhHHHHHHCCCeEEEECCCCCC----CC----c--ceEECCHHHHHHHHHHh
Confidence            999999634999999999999999876321    11    1  56899999999988764

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.29  E-value=7.7e-14  Score=110.68  Aligned_cols=108  Identities=17%  Similarity=0.139  Sum_probs=70.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccc--------------cCCCcccccCchHHHHHHhcc--CCCccccCCCcH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTH--------------LTDAQEWAGGGSMVGAFVGST--QREPLVVGKPST  179 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~--------------~~~~~~~~~~g~~~~~i~~~~--~~~~~~~gKP~p  179 (257)
                      ..|+.+.+++..|++.+-.++|+||......              ....+...|+.  |+.+..+.  +.+.....||+|
T Consensus        42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~p  119 (176)
T 2fpr_A           42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPKV  119 (176)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTSC
T ss_pred             cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCCH
Confidence            4567888899999874334778899843210              00011112221  12221110  012234589999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCC
Q 025117          180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS  226 (257)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~  226 (257)
                      .+|+.++++++++|++++||||+ ..|+.+|+++|+++|+|.++...
T Consensus       120 ~~~~~~~~~~gi~~~~~l~VGD~-~~Di~~A~~aG~~~i~v~~~~~~  165 (176)
T 2fpr_A          120 KLVERYLAEQAMDRANSYVIGDR-ATDIQLAENMGINGLRYDRETLN  165 (176)
T ss_dssp             GGGGGGC----CCGGGCEEEESS-HHHHHHHHHHTSEEEECBTTTBC
T ss_pred             HHHHHHHHHcCCCHHHEEEEcCC-HHHHHHHHHcCCeEEEEcCCccc
Confidence            99999999999999999999999 59999999999999999988543

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.29  E-value=9.7e-13  Score=106.05  Aligned_cols=108  Identities=13%  Similarity=0.030  Sum_probs=79.5

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCccc------ccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhC
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEW------AGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFG  190 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~------~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~  190 (257)
                      .++.+.+.+..+++ +..++|+||.+..... ..+..      .++..+|+.+....   ....+||+|.+|..+++++|
T Consensus        90 ~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~-~~~~~l~~~~~~~l~~~f~~~~~~~---~~~~~Kp~~~~~~~~~~~~~  164 (211)
T 2i6x_A           90 ISAEKFDYIDSLRP-DYRLFLLSNTNPYVLD-LAMSPRFLPSGRTLDSFFDKVYASC---QMGKYKPNEDIFLEMIADSG  164 (211)
T ss_dssp             ECHHHHHHHHHHTT-TSEEEEEECCCHHHHH-HHTSTTSSTTCCCGGGGSSEEEEHH---HHTCCTTSHHHHHHHHHHHC
T ss_pred             cChHHHHHHHHHHc-CCeEEEEeCCCHHHHH-HHHhhhccccccCHHHHcCeEEeec---ccCCCCCCHHHHHHHHHHhC
Confidence            46788888888886 4447788998764321 11222      35544444333222   23459999999999999999


Q ss_pred             CCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhh
Q 025117          191 IQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML  230 (257)
Q Consensus       191 ~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~  230 (257)
                      ++|++|+||||+ ..|+.+|+++|+.++++.++..-.+.+
T Consensus       165 ~~~~~~~~igD~-~~Di~~a~~aG~~~~~~~~~~~~~~~l  203 (211)
T 2i6x_A          165 MKPEETLFIDDG-PANVATAERLGFHTYCPDNGENWIPAI  203 (211)
T ss_dssp             CCGGGEEEECSC-HHHHHHHHHTTCEEECCCTTCCCHHHH
T ss_pred             CChHHeEEeCCC-HHHHHHHHHcCCEEEEECCHHHHHHHH
Confidence            999999999999 589999999999999999886655443

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.28  E-value=1.1e-12  Score=110.91  Aligned_cols=123  Identities=15%  Similarity=0.100  Sum_probs=87.2

Q ss_pred             CHHHHHHHHHHHHcC-CCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCC----
Q 025117          117 NYYKVQYGTLCIREN-PGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGI----  191 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~-~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~----  191 (257)
                      .++.+.+.+..+++. +....|+||...... ...+...++.. ++.+.+   .+....+||+|..|..+++++|+    
T Consensus       115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~-~~~l~~~~l~~-f~~i~~---~~~~~~~kp~~~~~~~~~~~lgi~~~~  189 (275)
T 2qlt_A          115 EVPGAVKLCNALNALPKEKWAVATSGTRDMA-KKWFDILKIKR-PEYFIT---ANDVKQGKPHPEPYLKGRNGLGFPINE  189 (275)
T ss_dssp             ECTTHHHHHHHHHTSCGGGEEEECSSCHHHH-HHHHHHHTCCC-CSSEEC---GGGCSSCTTSSHHHHHHHHHTTCCCCS
T ss_pred             cCcCHHHHHHHHHhccCCeEEEEeCCCHHHH-HHHHHHcCCCc-cCEEEE---cccCCCCCCChHHHHHHHHHcCCCccc
Confidence            456677788888764 234678898765332 11122223221 222222   22234589999999999999999    


Q ss_pred             ---CCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHH
Q 025117          192 ---QKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL  250 (257)
Q Consensus       192 ---~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~  250 (257)
                         +|++|++|||+ ..|+.+|+++|+.+++|.+|.. .+++..    ..|+++++++.||.
T Consensus       190 ~~~~~~~~i~~GDs-~nDi~~a~~AG~~~i~v~~~~~-~~~~~~----~~ad~v~~~~~el~  245 (275)
T 2qlt_A          190 QDPSKSKVVVFEDA-PAGIAAGKAAGCKIVGIATTFD-LDFLKE----KGCDIIVKNHESIR  245 (275)
T ss_dssp             SCGGGSCEEEEESS-HHHHHHHHHTTCEEEEESSSSC-HHHHTT----SSCSEEESSGGGEE
T ss_pred             cCCCcceEEEEeCC-HHHHHHHHHcCCEEEEECCCCC-HHHHhh----CCCCEEECChHHcC
Confidence               99999999999 5999999999999999999865 344432    46999999998863

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.26  E-value=2.3e-12  Score=104.07  Aligned_cols=115  Identities=15%  Similarity=0.061  Sum_probs=81.8

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEE
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC  197 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  197 (257)
                      ++.+.+.+..+++.+-...++||... .  ...+...++..+++.+.   ..+....+||+|..|+.+++++|++|++|+
T Consensus        93 ~~~~~~~l~~l~~~g~~~~i~t~~~~-~--~~~l~~~~l~~~f~~~~---~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i  166 (221)
T 2wf7_A           93 YPGILQLLKDLRSNKIKIALASASKN-G--PFLLERMNLTGYFDAIA---DPAEVAASKPAPDIFIAAAHAVGVAPSESI  166 (221)
T ss_dssp             CTTHHHHHHHHHHTTCEEEECCCCTT-H--HHHHHHTTCGGGCSEEC---CTTTSSSCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred             CCCHHHHHHHHHHCCCeEEEEcCcHH-H--HHHHHHcChHHHcceEe---ccccCCCCCCChHHHHHHHHHcCCChhHeE
Confidence            45566777777763334677788721 1  11222334444443332   233345699999999999999999999999


Q ss_pred             EEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhH
Q 025117          198 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF  249 (257)
Q Consensus       198 ~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el  249 (257)
                      +|||+ ..|+.+|+++|+.++++..    .+++.      .|+++++++.|+
T Consensus       167 ~iGD~-~nDi~~a~~aG~~~~~~~~----~~~~~------~a~~v~~~~~el  207 (221)
T 2wf7_A          167 GLEDS-QAGIQAIKDSGALPIGVGR----PEDLG------DDIVIVPDTSHY  207 (221)
T ss_dssp             EEESS-HHHHHHHHHHTCEEEEESC----HHHHC------SSSEEESSGGGC
T ss_pred             EEeCC-HHHHHHHHHCCCEEEEECC----HHHhc------cccchhcCHHhC
Confidence            99999 5999999999999999853    23332      689999999986

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.26  E-value=1.5e-12  Score=103.90  Aligned_cols=101  Identities=14%  Similarity=-0.016  Sum_probs=74.3

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCC-CccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRD-AVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      .++.+.+++..|++.+-.++|+||.. .... ...+...|+..+|+.+        ....+|+|..|..++++++++|++
T Consensus        69 ~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~-~~~l~~~gl~~~f~~~--------~~~~~~k~~~~~~~~~~~~~~~~~  139 (187)
T 2wm8_A           69 LYPEVPEVLKRLQSLGVPGAAASRTSEIEGA-NQLLELFDLFRYFVHR--------EIYPGSKITHFERLQQKTGIPFSQ  139 (187)
T ss_dssp             CCTTHHHHHHHHHHHTCCEEEEECCSCHHHH-HHHHHHTTCTTTEEEE--------EESSSCHHHHHHHHHHHHCCCGGG
T ss_pred             cchhHHHHHHHHHHCCceEEEEeCCCChHHH-HHHHHHcCcHhhccee--------EEEeCchHHHHHHHHHHcCCChHH
Confidence            46778888988887444578889986 2221 1122233333222211        124689999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCCh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL  227 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~  227 (257)
                      |+||||+ .+|+.+|+++|+.+++|.+|....
T Consensus       140 ~~~igD~-~~Di~~a~~aG~~~i~v~~g~~~~  170 (187)
T 2wm8_A          140 MIFFDDE-RRNIVDVSKLGVTCIHIQNGMNLQ  170 (187)
T ss_dssp             EEEEESC-HHHHHHHHTTTCEEEECSSSCCHH
T ss_pred             EEEEeCC-ccChHHHHHcCCEEEEECCCCChH
Confidence            9999999 699999999999999999997543

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.22  E-value=5.9e-12  Score=102.72  Aligned_cols=101  Identities=14%  Similarity=0.050  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCC--ccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQRE--PLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~--~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ++...+.++.|++.+-.++|+||...... ...+..  +..+|+.+.  .+..  .....||+|.+|..+++++++    
T Consensus        90 ~~~~~e~l~~L~~~G~~l~ivTn~~~~~~-~~~l~~--l~~~f~~i~--~~~~~~~~~~~KP~p~~~~~~~~~~g~----  160 (211)
T 2b82_A           90 KEVARQLIDMHVRRGDAIFFVTGRSPTKT-ETVSKT--LADNFHIPA--TNMNPVIFAGDKPGQNTKSQWLQDKNI----  160 (211)
T ss_dssp             CHHHHHHHHHHHHHTCEEEEEECSCCCSS-CCHHHH--HHHHTTCCT--TTBCCCEECCCCTTCCCSHHHHHHTTE----
T ss_pred             cHHHHHHHHHHHHCCCEEEEEcCCcHHHH-HHHHHH--HHHhcCccc--cccchhhhcCCCCCHHHHHHHHHHCCC----
Confidence            45677788888764445778999876432 111111  233333221  1111  123489999999999999998    


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS  228 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~  228 (257)
                      |+||||++ .||++|+++||++|+|.+|.....
T Consensus       161 ~l~VGDs~-~Di~aA~~aG~~~i~v~~g~~~~~  192 (211)
T 2b82_A          161 RIFYGDSD-NDITAARDVGARGIRILRASNSTY  192 (211)
T ss_dssp             EEEEESSH-HHHHHHHHTTCEEEECCCCTTCSS
T ss_pred             EEEEECCH-HHHHHHHHCCCeEEEEecCCCCcc
Confidence            99999995 999999999999999999876543

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.17  E-value=2.2e-11  Score=104.27  Aligned_cols=100  Identities=13%  Similarity=-0.043  Sum_probs=72.9

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCC--Cccc--------ccCchHHHHHHhccCCCccccCCCcHHHHHHHH
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTD--AQEW--------AGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLA  186 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~--~~~~--------~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~  186 (257)
                      .|+.+.+++..|++.+-.++|+||++.......  .+..        .|+  .|+.+......    ..||+|.++..++
T Consensus       189 ~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~----~~kp~p~~~~~~~  262 (301)
T 1ltq_A          189 INPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQG----DTRKDDVVKEEIF  262 (301)
T ss_dssp             BCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTT----CCSCHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCC----CCcHHHHHHHHHH
Confidence            489999999999874445788999987542110  1112        333  12222222111    2799999999999


Q ss_pred             HHhCCCCCc-EEEEcCChhhHHHHHHHcCCeEEEEccC
Q 025117          187 NKFGIQKSQ-ICMVGDRLDTDILFGQNGGCKTLLVLSG  223 (257)
Q Consensus       187 ~~~~~~~~~-~~~IGD~~~~Di~~A~~aG~~ti~V~~G  223 (257)
                      ++++.++.+ ++||||+ ..||++|+++|+.++.|.||
T Consensus       263 ~~~~~~~~~~~~~vgD~-~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          263 WKHIAPHFDVKLAIDDR-TQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             HHHTTTTCEEEEEEECC-HHHHHHHHHTTCCEEECSCC
T ss_pred             HHHhccccceEEEeCCc-HHHHHHHHHcCCeEEEecCC
Confidence            999877655 7999999 69999999999999999998

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.17  E-value=5.2e-12  Score=115.14  Aligned_cols=110  Identities=16%  Similarity=0.097  Sum_probs=77.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccC-CCccc--ccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLT-DAQEW--AGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ  192 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~-~~~~~--~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~  192 (257)
                      ..++.+.+.+..|++.+-.++|+||........ .....  .++..+|+.+..+   +....+||+|++|..+++++|++
T Consensus       100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~---~~~~~~KP~p~~~~~~~~~lg~~  176 (555)
T 3i28_A          100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIES---CQVGMVKPEPQIYKFLLDTLKAS  176 (555)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEH---HHHTCCTTCHHHHHHHHHHHTCC
T ss_pred             CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEec---cccCCCCCCHHHHHHHHHHcCCC
Confidence            456778888989987444578899972211100 01111  1333344433332   23445899999999999999999


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhh
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSM  229 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~  229 (257)
                      |++|+||||+ ..||.+|+++||+++++.++....+.
T Consensus       177 p~~~~~v~D~-~~di~~a~~aG~~~~~~~~~~~~~~~  212 (555)
T 3i28_A          177 PSEVVFLDDI-GANLKPARDLGMVTILVQDTDTALKE  212 (555)
T ss_dssp             GGGEEEEESC-HHHHHHHHHHTCEEEECSSHHHHHHH
T ss_pred             hhHEEEECCc-HHHHHHHHHcCCEEEEECCCccHHHH
Confidence            9999999999 69999999999999999987654443

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.15  E-value=1.5e-11  Score=95.50  Aligned_cols=107  Identities=12%  Similarity=0.137  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEE
Q 025117          119 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM  198 (257)
Q Consensus       119 ~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~  198 (257)
                      +...+++..|++.+...+|+||...... ...+...|+..+            ...+||+|.+|+.++++++++|++++|
T Consensus        39 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~-~~~l~~~gl~~~------------~~~~kp~~~~~~~~~~~~~~~~~~~~~  105 (162)
T 2p9j_A           39 VLDGIGIKLLQKMGITLAVISGRDSAPL-ITRLKELGVEEI------------YTGSYKKLEIYEKIKEKYSLKDEEIGF  105 (162)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEESCCCHHH-HHHHHHTTCCEE------------EECC--CHHHHHHHHHHTTCCGGGEEE
T ss_pred             ccHHHHHHHHHHCCCEEEEEeCCCcHHH-HHHHHHcCCHhh------------ccCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            3456788888864445778899865332 111122222211            122799999999999999999999999


Q ss_pred             EcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh
Q 025117          199 VGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD  248 (257)
Q Consensus       199 IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e  248 (257)
                      |||+. +|+.+|+++|+.+++ .++  . +.+.     ..++++++++.+
T Consensus       106 vGD~~-~Di~~a~~ag~~~~~-~~~--~-~~~~-----~~a~~v~~~~~~  145 (162)
T 2p9j_A          106 IGDDV-VDIEVMKKVGFPVAV-RNA--V-EEVR-----KVAVYITQRNGG  145 (162)
T ss_dssp             EECSG-GGHHHHHHSSEEEEC-TTS--C-HHHH-----HHCSEECSSCSS
T ss_pred             ECCCH-HHHHHHHHCCCeEEe-cCc--c-HHHH-----hhCCEEecCCCC
Confidence            99995 999999999998663 333  2 2332     258999998765

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.09  E-value=3.4e-12  Score=103.15  Aligned_cols=124  Identities=10%  Similarity=0.069  Sum_probs=81.9

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccC-------CCccccCCCcHHHHHHHHHHh
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQ-------REPLVVGKPSTFMMDYLANKF  189 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~-------~~~~~~gKP~p~~~~~~~~~~  189 (257)
                      .++.+.+.+..+++.+-.+.|+||...... ...+...|+..+++.+.....       ......+||+|.+|+.+++++
T Consensus        76 ~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~-~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~~  154 (217)
T 3m1y_A           76 LFEGALELVSALKEKNYKVVCFSGGFDLAT-NHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRLL  154 (217)
T ss_dssp             BCBTHHHHHHHHHTTTEEEEEEEEEEHHHH-HHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHCCCEEEEEcCCchhHH-HHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHHHc
Confidence            445677888888864334678898765332 112223343333322221111       011235899999999999999


Q ss_pred             CCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEEC--ChhhHHHH
Q 025117          190 GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN--KISDFLSL  252 (257)
Q Consensus       190 ~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~--~l~el~~~  252 (257)
                      |++|++|+||||+ .+|+.+|+++|+.+++  .   ..+.+.     ..||++++  +|.++..+
T Consensus       155 g~~~~~~i~vGDs-~~Di~~a~~aG~~~~~--~---~~~~l~-----~~ad~v~~~~dl~~~~~~  208 (217)
T 3m1y_A          155 NISKTNTLVVGDG-ANDLSMFKHAHIKIAF--N---AKEVLK-----QHATHCINEPDLALIKPL  208 (217)
T ss_dssp             TCCSTTEEEEECS-GGGHHHHTTCSEEEEE--S---CCHHHH-----TTCSEEECSSBGGGGTTC
T ss_pred             CCCHhHEEEEeCC-HHHHHHHHHCCCeEEE--C---ccHHHH-----HhcceeecccCHHHHHHH
Confidence            9999999999999 5999999999998765  2   234444     36899986  55665544

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.08  E-value=1.4e-11  Score=97.34  Aligned_cols=103  Identities=26%  Similarity=0.225  Sum_probs=73.7

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..+++.+-..+++||.+...  ...+...++..+++.+...   +....+||+|..|+.+++++|++  +|
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~--~~~l~~~~~~~~f~~~~~~---~~~~~~kp~~~~~~~~~~~~~~~--~~  155 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRNDQV--LEILEKTSIAAYFTEVVTS---SSGFKRKPNPESMLYLREKYQIS--SG  155 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCTHH--HHHHHHTTCGGGEEEEECG---GGCCCCTTSCHHHHHHHHHTTCS--SE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCcHHH--HHHHHHcCCHhheeeeeec---cccCCCCCCHHHHHHHHHHcCCC--eE
Confidence            45567788888876444567889875421  1122334444444333222   23345999999999999999998  99


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCCh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSL  227 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~  227 (257)
                      ++|||+ ..|+.+|+++|+.++++.+|....
T Consensus       156 ~~iGD~-~~Di~~a~~aG~~~~~~~~~~~~~  185 (190)
T 2fi1_A          156 LVIGDR-PIDIEAGQAAGLDTHLFTSIVNLR  185 (190)
T ss_dssp             EEEESS-HHHHHHHHHTTCEEEECSCHHHHH
T ss_pred             EEEcCC-HHHHHHHHHcCCeEEEECCCCChh
Confidence            999999 699999999999999999875433

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.05  E-value=6.5e-12  Score=101.06  Aligned_cols=128  Identities=10%  Similarity=-0.082  Sum_probs=84.4

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH-HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV-GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~-~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      .++.+.+.+..+++. ..++|+||...... ...+...|+..+| +.+............||+|..+..++++++..|++
T Consensus        70 ~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~-~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~~  147 (206)
T 1rku_A           70 PLEGAVEFVDWLRER-FQVVILSDTFYEFS-QPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR  147 (206)
T ss_dssp             CCTTHHHHHHHHHTT-SEEEEEEEEEHHHH-HHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred             CCccHHHHHHHHHhc-CcEEEEECChHHHH-HHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCCE
Confidence            355677888888875 56788899865432 1122334444333 12221111110011258889999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEE-ECChhhHHHHHHhh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFY-TNKISDFLSLKAAA  256 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~-~~~l~el~~~l~~~  256 (257)
                      |+||||+ .+|+.+|+++|+..+ +.    ..+.+..    ..|+++ ++++.++.+++...
T Consensus       148 ~~~iGD~-~~Di~~a~~aG~~~~-~~----~~~~~~~----~~~~~~~~~~~~~l~~~l~~~  199 (206)
T 1rku_A          148 VIAAGDS-YNDTTMLSEAHAGIL-FH----APENVIR----EFPQFPAVHTYEDLKREFLKA  199 (206)
T ss_dssp             EEEEECS-STTHHHHHHSSEEEE-ES----CCHHHHH----HCTTSCEECSHHHHHHHHHHH
T ss_pred             EEEEeCC-hhhHHHHHhcCccEE-EC----CcHHHHH----HHhhhccccchHHHHHHHHHH
Confidence            9999999 599999999999855 32    1223322    357775 99999999988754

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.05  E-value=1.1e-11  Score=100.98  Aligned_cols=127  Identities=11%  Similarity=0.058  Sum_probs=80.5

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCch--HHHHHHh------ccCCCc---cccCCCcHHHHHHH
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGS--MVGAFVG------STQREP---LVVGKPSTFMMDYL  185 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~--~~~~i~~------~~~~~~---~~~gKP~p~~~~~~  185 (257)
                      .++.+.+.++.|++.+-..+|+||...... ...+...|+..  +++.+..      ..+.+.   ....||+|.+|..+
T Consensus        87 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~-~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~  165 (225)
T 1nnl_A           87 LTPGIRELVSRLQERNVQVFLISGGFRSIV-EHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLL  165 (225)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHH-HHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHCCCcEEEEeCChHHHH-HHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHHH
Confidence            456678888899874445778899866432 11222333321  2211100      011111   11146888999999


Q ss_pred             HHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          186 ANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       186 ~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      ++++|+  ++|+||||+ .+|+.+|+++|+ ++++..+... +...     ..|+++++++.|+.+++.
T Consensus       166 ~~~~~~--~~~~~vGDs-~~Di~~a~~ag~-~i~~~~~~~~-~~~~-----~~~~~~~~~~~el~~~l~  224 (225)
T 1nnl_A          166 KEKFHF--KKIIMIGDG-ATDMEACPPADA-FIGFGGNVIR-QQVK-----DNAKWYITDFVELLGELE  224 (225)
T ss_dssp             HHHHCC--SCEEEEESS-HHHHTTTTTSSE-EEEECSSCCC-HHHH-----HHCSEEESCGGGGCC---
T ss_pred             HHHcCC--CcEEEEeCc-HHhHHHHHhCCe-EEEecCcccc-HHHH-----hcCCeeecCHHHHHHHHh
Confidence            999998  789999999 599999999999 8887543322 2222     358999999999987764

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.03  E-value=1.1e-11  Score=99.64  Aligned_cols=130  Identities=9%  Similarity=-0.029  Sum_probs=82.2

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCch--HHHH-HHh-ccCCC-ccccCCCcHHHHHHHHH-HhC
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGS--MVGA-FVG-STQRE-PLVVGKPSTFMMDYLAN-KFG  190 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~--~~~~-i~~-~~~~~-~~~~gKP~p~~~~~~~~-~~~  190 (257)
                      .++.+.+.++.+++.+-...|+||...... .......|+..  ++.. +.. ..+.- .....||+|..+..++. .+|
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  161 (219)
T 3kd3_A           83 LTDGIKELVQDLKNKGFEIWIFSGGLSESI-QPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG  161 (219)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHH-HHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred             CChhHHHHHHHHHHCCCeEEEEcCCcHHHH-HHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence            345677788888874445778898755331 11112222210  0000 000 01110 02347888776666554 459


Q ss_pred             CCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          191 IQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       191 ~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      ++|++++||||+ .+|+.++ ++|+.+++|.+|.....+...    ..|+++++++.||.+++
T Consensus       162 ~~~~~~~~vGD~-~~Di~~~-~~G~~~~~v~~~~~~~~~~~~----~~ad~v~~~~~el~~~l  218 (219)
T 3kd3_A          162 LIDGEVIAIGDG-YTDYQLY-EKGYATKFIAYMEHIEREKVI----NLSKYVARNVAELASLI  218 (219)
T ss_dssp             GCCSEEEEEESS-HHHHHHH-HHTSCSEEEEECSSCCCHHHH----HHCSEEESSHHHHHHHH
T ss_pred             CCCCCEEEEECC-HhHHHHH-hCCCCcEEEeccCccccHHHH----hhcceeeCCHHHHHHhh
Confidence            999999999999 5899998 689999999887665433222    36999999999999876

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.01  E-value=1.2e-11  Score=101.96  Aligned_cols=127  Identities=9%  Similarity=-0.079  Sum_probs=85.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCc-----cccCCCcHH-HHH------
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP-----LVVGKPSTF-MMD------  183 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~-----~~~gKP~p~-~~~------  183 (257)
                      ..|+.+.+.++.|++.+-.++|+||...... ...+.  ++..+ +.+.+......     ..+.||+|. ++.      
T Consensus        77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~-~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K  152 (236)
T 2fea_A           77 KIREGFREFVAFINEHEIPFYVISGGMDFFV-YPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK  152 (236)
T ss_dssp             CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHH-HHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred             CCCccHHHHHHHHHhCCCeEEEEeCCcHHHH-HHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCcH
Confidence            3466778888888864445788999866432 11111  43223 33332211100     113799999 465      


Q ss_pred             -HHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCC-CCcEEECChhhHHHHHHh
Q 025117          184 -YLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSI-QPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       184 -~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~-~pd~~~~~l~el~~~l~~  255 (257)
                       .++++++++|++++||||+ .+|+.+|+++|+.++  .+|.  .+.+..    . .|+++++++.||.+++..
T Consensus       153 ~~~~~~~~~~~~~~~~vGDs-~~Di~~a~~aG~~~~--~~~~--~~~~~~----~~~~~~~~~~~~el~~~l~~  217 (236)
T 2fea_A          153 PSVIHELSEPNQYIIMIGDS-VTDVEAAKLSDLCFA--RDYL--LNECRE----QNLNHLPYQDFYEIRKEIEN  217 (236)
T ss_dssp             HHHHHHHCCTTCEEEEEECC-GGGHHHHHTCSEEEE--CHHH--HHHHHH----TTCCEECCSSHHHHHHHHHT
T ss_pred             HHHHHHHhccCCeEEEEeCC-hHHHHHHHhCCeeee--chHH--HHHHHH----CCCCeeecCCHHHHHHHHHH
Confidence             8899999999999999999 699999999999886  3432  223322    2 389999999999988764

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.00  E-value=8.5e-11  Score=91.44  Aligned_cols=107  Identities=16%  Similarity=0.121  Sum_probs=72.5

Q ss_pred             HHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCCh
Q 025117          124 GTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRL  203 (257)
Q Consensus       124 ~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~  203 (257)
                      +++.|++.+-..+|+||...... ...+...|+..            .....||+|.+|..++++++++|++++||||+.
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~-~~~~~~~gl~~------------~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~  105 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIV-RRRAEKLKVDY------------LFQGVVDKLSAAEELCNELGINLEQVAYIGDDL  105 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHH-HHHHHHTTCSE------------EECSCSCHHHHHHHHHHHHTCCGGGEEEECCSG
T ss_pred             HHHHHHHCCCEEEEEeCCChHHH-HHHHHHcCCCE------------eecccCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence            56777764445778899765321 11111122111            122369999999999999999999999999995


Q ss_pred             hhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECC------hhhHHHHH
Q 025117          204 DTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK------ISDFLSLK  253 (257)
Q Consensus       204 ~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~------l~el~~~l  253 (257)
                       +|+.+|+++|+.++. .++  . +...     ..+++++.+      +.++.+.+
T Consensus       106 -~Di~~~~~ag~~~~~-~~~--~-~~~~-----~~ad~v~~~~~~~g~~~e~~~~l  151 (164)
T 3e8m_A          106 -NDAKLLKRVGIAGVP-ASA--P-FYIR-----RLSTIFLEKRGGEGVFREFVEKV  151 (164)
T ss_dssp             -GGHHHHTTSSEEECC-TTS--C-HHHH-----TTCSSCCCCCTTTTHHHHHHHHH
T ss_pred             -HHHHHHHHCCCeEEc-CCh--H-HHHH-----HhCcEEeccCCCCcHHHHHHHHH
Confidence             999999999996554 222  2 2333     357888877      66666554

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=98.96  E-value=5.5e-11  Score=106.66  Aligned_cols=99  Identities=21%  Similarity=0.129  Sum_probs=70.2

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccc-----------cCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHH
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTH-----------LTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYL  185 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~-----------~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~  185 (257)
                      .|+.+.+++..|++.+-.++|+||+.....           ....+...|+.  |+.   ..+.+....+||+|.+|..+
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~---i~~~~~~~~~KP~p~~~~~a  162 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQV---LVATHAGLNRKPVSGMWDHL  162 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEE---EEECSSSTTSTTSSHHHHHH
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEE---EEECCCCCCCCCCHHHHHHH
Confidence            478899999999875455889999762110           00011112221  221   22233455799999999999


Q ss_pred             HHHhC----CCCCcEEEEcCCh----------------hhHHHHHHHcCCeEEEE
Q 025117          186 ANKFG----IQKSQICMVGDRL----------------DTDILFGQNGGCKTLLV  220 (257)
Q Consensus       186 ~~~~~----~~~~~~~~IGD~~----------------~~Di~~A~~aG~~ti~V  220 (257)
                      +++++    ++|++|+||||++                .+|+.+|+++|++++..
T Consensus       163 ~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~p  217 (416)
T 3zvl_A          163 QEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATP  217 (416)
T ss_dssp             HHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECH
T ss_pred             HHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCc
Confidence            99997    9999999999996                48999999999997754

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.93  E-value=1.7e-10  Score=92.54  Aligned_cols=108  Identities=14%  Similarity=0.096  Sum_probs=73.7

Q ss_pred             HHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCc-cccCCCcHHHHHHHHHHhCCCCCcEEEEcCC
Q 025117          124 GTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREP-LVVGKPSTFMMDYLANKFGIQKSQICMVGDR  202 (257)
Q Consensus       124 ~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~-~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~  202 (257)
                      ++..|++.+..++|+||.+.... ...+...             |... ....||+|..+..++++++++|++++||||+
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~-~~~l~~l-------------gl~~~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~  119 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVV-DHRMEQL-------------GITHYYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDD  119 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHH-HHHHHHH-------------TCCEEECSCSSCHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred             HHHHHHHCCCeEEEEeCcChHHH-HHHHHHc-------------CCccceeCCCChHHHHHHHHHHhCCCHHHEEEECCC
Confidence            57778774445778899765321 1111111             2221 1224999999999999999999999999999


Q ss_pred             hhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECC------hhhHHHHHHh
Q 025117          203 LDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK------ISDFLSLKAA  255 (257)
Q Consensus       203 ~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~------l~el~~~l~~  255 (257)
                       .+|+.+++++|+.++ +..+  . +.+.     ..+++++.+      +.++.+++..
T Consensus       120 -~~Di~~~~~ag~~~~-~~~~--~-~~~~-----~~ad~v~~~~~~~g~~~~l~~~ll~  168 (191)
T 3n1u_A          120 -LPDLPLIQQVGLGVA-VSNA--V-PQVL-----EFADWRTERTGGRGAVRELCDLILN  168 (191)
T ss_dssp             -GGGHHHHHHSSEEEE-CTTC--C-HHHH-----HHSSEECSSCTTTTHHHHHHHHHHH
T ss_pred             -HHHHHHHHHCCCEEE-eCCc--c-HHHH-----HhCCEEecCCCCCcHHHHHHHHHHH
Confidence             599999999998863 3322  2 2222     257899888      6677766543

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=98.87  E-value=4.6e-11  Score=103.39  Aligned_cols=128  Identities=11%  Similarity=-0.015  Sum_probs=82.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccC-------CCccccCCCcHHHHHHHHHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQ-------REPLVVGKPSTFMMDYLANK  188 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~-------~~~~~~gKP~p~~~~~~~~~  188 (257)
                      ..++.+.+.+..|++.+-.++|+||...... ...+...|+..+++.+....+       ......+||+|.+|..++++
T Consensus       179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~-~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~  257 (317)
T 4eze_A          179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFT-QRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAAR  257 (317)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHH-HHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred             EECcCHHHHHHHHHhCCCEEEEEeCccHHHH-HHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHH
Confidence            3556778888888875455788899766432 112233343333222211111       11233469999999999999


Q ss_pred             hCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEE--ECChhhHHHHHHh
Q 025117          189 FGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFY--TNKISDFLSLKAA  255 (257)
Q Consensus       189 ~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~--~~~l~el~~~l~~  255 (257)
                      +|++|++++||||+ .+|+.+|+++|+..++   + .... +.     ..++++  .+++.+++++++.
T Consensus       258 lgv~~~~~i~VGDs-~~Di~aa~~AG~~va~---~-~~~~-~~-----~~a~~~i~~~~L~~ll~~L~~  315 (317)
T 4eze_A          258 LNIATENIIACGDG-ANDLPMLEHAGTGIAW---K-AKPV-VR-----EKIHHQINYHGFELLLFLIED  315 (317)
T ss_dssp             HTCCGGGEEEEECS-GGGHHHHHHSSEEEEE---S-CCHH-HH-----HHCCEEESSSCGGGGGGGTCS
T ss_pred             cCCCcceEEEEeCC-HHHHHHHHHCCCeEEe---C-CCHH-HH-----HhcCeeeCCCCHHHHHHHHHh
Confidence            99999999999999 5999999999986665   2 2222 22     123444  4588888777643

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.86  E-value=3.4e-09  Score=83.85  Aligned_cols=104  Identities=12%  Similarity=0.013  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEE
Q 025117          120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV  199 (257)
Q Consensus       120 ~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~I  199 (257)
                      ...+++..|++.+...+|+||...... .......|+..            .....||+|..++.++++++++|++++||
T Consensus        39 ~~~~~l~~L~~~G~~~~i~Tg~~~~~~-~~~~~~lgl~~------------~~~~~k~k~~~~~~~~~~~~~~~~~~~~v  105 (180)
T 1k1e_A           39 RDGLGIKMLMDADIQVAVLSGRDSPIL-RRRIADLGIKL------------FFLGKLEKETACFDLMKQAGVTAEQTAYI  105 (180)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCCCHHH-HHHHHHHTCCE------------EEESCSCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred             chHHHHHHHHHCCCeEEEEeCCCcHHH-HHHHHHcCCce------------eecCCCCcHHHHHHHHHHcCCCHHHEEEE
Confidence            345678888874445778898765331 11111122211            11236999999999999999999999999


Q ss_pred             cCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECCh
Q 025117          200 GDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI  246 (257)
Q Consensus       200 GD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l  246 (257)
                      ||+ ..|+.+++++|+..+. .++   .+.+.     ..+++++++.
T Consensus       106 GD~-~~Di~~~~~ag~~~~~-~~~---~~~~~-----~~ad~v~~~~  142 (180)
T 1k1e_A          106 GDD-SVDLPAFAACGTSFAV-ADA---PIYVK-----NAVDHVLSTH  142 (180)
T ss_dssp             ECS-GGGHHHHHHSSEEEEC-TTS---CHHHH-----TTSSEECSSC
T ss_pred             CCC-HHHHHHHHHcCCeEEe-CCc---cHHHH-----hhCCEEecCC
Confidence            999 5999999999998664 222   23333     3689998875

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=98.86  E-value=1.4e-08  Score=80.84  Aligned_cols=100  Identities=20%  Similarity=0.162  Sum_probs=68.6

Q ss_pred             HHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCCh
Q 025117          124 GTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRL  203 (257)
Q Consensus       124 ~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~  203 (257)
                      +++.|++.+...+|+||...... ...+...|+..            ....+||+|.+|+.+++++|++|++++||||+.
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~-~~~l~~lgl~~------------~~~~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~  127 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLV-EDRCATLGITH------------LYQGQSNKLIAFSDLLEKLAIAPENVAYVGDDL  127 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHH-HHHHHHHTCCE------------EECSCSCSHHHHHHHHHHHTCCGGGEEEEESSG
T ss_pred             HHHHHHHCCCeEEEEeCCChHHH-HHHHHHcCCce------------eecCCCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence            67777764445778899765321 11111112111            122379999999999999999999999999995


Q ss_pred             hhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECCh
Q 025117          204 DTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI  246 (257)
Q Consensus       204 ~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l  246 (257)
                       +|+.+|+++|+.+++ .++.   +.+.     ..+++++++.
T Consensus       128 -~Di~~a~~ag~~~~~-~~~~---~~~~-----~~ad~v~~~~  160 (188)
T 2r8e_A          128 -IDWPVMEKVGLSVAV-ADAH---PLLI-----PRADYVTRIA  160 (188)
T ss_dssp             -GGHHHHTTSSEEEEC-TTSC---TTTG-----GGSSEECSSC
T ss_pred             -HHHHHHHHCCCEEEe-cCcC---HHHH-----hcCCEEEeCC
Confidence             999999999998753 2221   1222     3589999886

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=98.83  E-value=8.5e-10  Score=87.47  Aligned_cols=121  Identities=9%  Similarity=-0.016  Sum_probs=81.9

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+.++.+++.+....|+||....... .. ...|+..++..+....  ......||.+.....+++++  +|++
T Consensus        79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~k~~~l~~l--~~~~  152 (201)
T 4ap9_A           79 NVSPEARELVETLREKGFKVVLISGSFEEVLE-PF-KELGDEFMANRAIFED--GKFQGIRLRFRDKGEFLKRF--RDGF  152 (201)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSG-GG-TTTSSEEEEEEEEEET--TEEEEEECCSSCHHHHHGGG--TTSC
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHH-HH-HHcCchhheeeEEeeC--CceECCcCCccCHHHHHHhc--CcCc
Confidence            56788888999998754557788987664322 12 3344332211111111  11111466666666777777  8999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      |+||||+ .+|+.+|+++|+. +++.++..            .+|++++++.|+.++++..
T Consensus       153 ~i~iGD~-~~Di~~~~~ag~~-v~~~~~~~------------~ad~v~~~~~el~~~l~~l  199 (201)
T 4ap9_A          153 ILAMGDG-YADAKMFERADMG-IAVGREIP------------GADLLVKDLKELVDFIKNL  199 (201)
T ss_dssp             EEEEECT-TCCHHHHHHCSEE-EEESSCCT------------TCSEEESSHHHHHHHHHTC
T ss_pred             EEEEeCC-HHHHHHHHhCCce-EEECCCCc------------cccEEEccHHHHHHHHHHh
Confidence            9999999 5999999999996 66655432            5899999999999998753

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.28  E-value=6.1e-10  Score=93.70  Aligned_cols=114  Identities=11%  Similarity=0.009  Sum_probs=80.7

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++...+++..|++.+-.+.++||.+.... .......|+..+|+.+.              |..+..++++++.++++|
T Consensus       137 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~-~~~~~~~gl~~~f~~~~--------------p~~k~~~~~~l~~~~~~~  201 (263)
T 2yj3_A          137 PRPNLKDYLEKLKNEGLKIIILSGDKEDKV-KELSKELNIQEYYSNLS--------------PEDKVRIIEKLKQNGNKV  201 (263)
Confidence            567777888888763334678899876542 33445556555554332              455678899999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEE--CChhhHHHHHHh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKAA  255 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~--~~l~el~~~l~~  255 (257)
                      +||||+ .+|+.+|+++|+.   |.+|....  ...    ..||+++  +++.+|.+++..
T Consensus       202 ~~VGD~-~~D~~aa~~Agv~---va~g~~~~--~~~----~~ad~v~~~~~l~~l~~~l~~  252 (263)
T 2yj3_A          202 LMIGDG-VNDAAALALADVS---VAMGNGVD--ISK----NVADIILVSNDIGTLLGLIKN  252 (263)
Confidence            999999 6999999999954   55564322  211    4689999  999999887653

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.77  E-value=4.6e-09  Score=83.88  Aligned_cols=108  Identities=14%  Similarity=0.096  Sum_probs=72.7

Q ss_pred             HHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCCh
Q 025117          124 GTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRL  203 (257)
Q Consensus       124 ~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~  203 (257)
                      ++..|++.+-.+.|+||...... ...+...|+..++            ...+|+|..+..+++++|++|++|+||||+ 
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~-~~~~~~lgl~~~f------------~~~~~K~~~~~~~~~~~g~~~~~~~~vGD~-  119 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIV-ERRAKSLGIEHLF------------QGREDKLVVLDKLLAELQLGYEQVAYLGDD-  119 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHH-HHHHHHHTCSEEE------------CSCSCHHHHHHHHHHHHTCCGGGEEEEECS-
T ss_pred             HHHHHHHCCCEEEEEECcChHHH-HHHHHHcCCHHHh------------cCcCChHHHHHHHHHHcCCChhHEEEECCC-
Confidence            67778764444778898765332 1111222222111            112777899999999999999999999999 


Q ss_pred             hhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECC------hhhHHHHHH
Q 025117          204 DTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK------ISDFLSLKA  254 (257)
Q Consensus       204 ~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~------l~el~~~l~  254 (257)
                      ..|+.+|+++|+..+ +  +....+ ..     ..+++++.+      +.++.+++.
T Consensus       120 ~nDi~~~~~ag~~~~-~--~~~~~~-~~-----~~ad~v~~~~~~~G~~~~l~~~l~  167 (189)
T 3mn1_A          120 LPDLPVIRRVGLGMA-V--ANAASF-VR-----EHAHGITRAQGGEGAAREFCELIL  167 (189)
T ss_dssp             GGGHHHHHHSSEEEE-C--TTSCHH-HH-----HTSSEECSSCTTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCeEE-e--CCccHH-HH-----HhCCEEecCCCCCcHHHHHHHHHH
Confidence            599999999998643 3  222322 22     258999988      677777664

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.77  E-value=9e-08  Score=75.38  Aligned_cols=108  Identities=13%  Similarity=0.056  Sum_probs=74.4

Q ss_pred             HHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCCh
Q 025117          124 GTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRL  203 (257)
Q Consensus       124 ~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~  203 (257)
                      ++..|++.+-.+.|+||...... .......|+             ......||+|..++.+++++++++++++||||+ 
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~-~~~~~~lgi-------------~~~~~~~~k~~~l~~~~~~~~~~~~~~~~vGD~-  111 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVV-AARARKLKI-------------PVLHGIDRKDLALKQWCEEQGIAPERVLYVGND-  111 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHH-HHHHHHHTC-------------CEEESCSCHHHHHHHHHHHHTCCGGGEEEEECS-
T ss_pred             HHHHHHHCCCeEEEEECcChHHH-HHHHHHcCC-------------eeEeCCCChHHHHHHHHHHcCCCHHHEEEEcCC-
Confidence            56777764445778898766432 111112221             111225999999999999999999999999999 


Q ss_pred             hhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECC------hhhHHHHHHh
Q 025117          204 DTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK------ISDFLSLKAA  255 (257)
Q Consensus       204 ~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~------l~el~~~l~~  255 (257)
                      .+|+.+++++|+..+ +  +....+ +.     ..+++++.+      +.++.+++..
T Consensus       112 ~nD~~~~~~ag~~v~-~--~~~~~~-~~-----~~ad~v~~~~~~~g~~~~l~~~l~~  160 (176)
T 3mmz_A          112 VNDLPCFALVGWPVA-V--ASAHDV-VR-----GAARAVTTVPGGDGAIREIASWILG  160 (176)
T ss_dssp             GGGHHHHHHSSEEEE-C--TTCCHH-HH-----HHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHCCCeEE-C--CChhHH-HH-----HhCCEEecCCCCCcHHHHHHHHHHH
Confidence            599999999996533 2  222322 22     257999998      8888887643

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.69  E-value=3.4e-09  Score=86.31  Aligned_cols=108  Identities=18%  Similarity=0.127  Sum_probs=71.8

Q ss_pred             HHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCCh
Q 025117          124 GTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRL  203 (257)
Q Consensus       124 ~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~  203 (257)
                      ++..|++.+-.+.|+||+..... ...+...|+..+            ....||+|..+..+++++|++|++|+||||+ 
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~-~~~l~~lgi~~~------------f~~~k~K~~~l~~~~~~lg~~~~~~~~vGDs-  149 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLL-EDRANTLGITHL------------YQGQSDKLVAYHELLATLQCQPEQVAYIGDD-  149 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHH-HHHHHHHTCCEE------------ECSCSSHHHHHHHHHHHHTCCGGGEEEEECS-
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHH-HHHHHHcCCchh------------hcccCChHHHHHHHHHHcCcCcceEEEEcCC-
Confidence            67778764334678898765331 111122222211            1123999999999999999999999999999 


Q ss_pred             hhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECCh------hhHHHHHH
Q 025117          204 DTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI------SDFLSLKA  254 (257)
Q Consensus       204 ~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l------~el~~~l~  254 (257)
                      ..|+.+++++|+..+ +..+  . +...     ..+|+++.+.      .|+.+++.
T Consensus       150 ~nDi~~~~~ag~~~a-~~~~--~-~~~~-----~~Ad~v~~~~~~~G~v~e~~~~ll  197 (211)
T 3ij5_A          150 LIDWPVMAQVGLSVA-VADA--H-PLLL-----PKAHYVTRIKGGRGAVREVCDLIL  197 (211)
T ss_dssp             GGGHHHHTTSSEEEE-CTTS--C-TTTG-----GGSSEECSSCTTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEE-eCCc--c-HHHH-----hhCCEEEeCCCCCcHHHHHHHHHH
Confidence            699999999997654 3322  1 1121     3689998775      66666554

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=98.68  E-value=3.2e-08  Score=85.83  Aligned_cols=128  Identities=10%  Similarity=0.022  Sum_probs=81.1

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhc-----cC--CCccccCCCcHHHHHHHHHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGS-----TQ--REPLVVGKPSTFMMDYLANK  188 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~-----~~--~~~~~~gKP~p~~~~~~~~~  188 (257)
                      ..++.+.+.+..+++.+-.+.|+||...... .......|+..+++.....     ++  ......+||+|.+|..++++
T Consensus       178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~-~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~  256 (335)
T 3n28_A          178 PLMPELPELVATLHAFGWKVAIASGGFTYFS-DYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQ  256 (335)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHH-HHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHH
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHH-HHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHH
Confidence            3556778888888875445778888654321 1111222222111100000     00  01233479999999999999


Q ss_pred             hCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEE--CChhhHHHHHHh
Q 025117          189 FGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKAA  255 (257)
Q Consensus       189 ~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~--~~l~el~~~l~~  255 (257)
                      +|++|++|+||||+ ..|+.+|+++|+..++  .+   .+.+.     ..+++++  +++.++..+|..
T Consensus       257 lgi~~~~~v~vGDs-~nDi~~a~~aG~~va~--~~---~~~~~-----~~a~~v~~~~~l~~v~~~L~~  314 (335)
T 3n28_A          257 YDVEIHNTVAVGDG-ANDLVMMAAAGLGVAY--HA---KPKVE-----AKAQTAVRFAGLGGVVCILSA  314 (335)
T ss_dssp             HTCCGGGEEEEECS-GGGHHHHHHSSEEEEE--SC---CHHHH-----TTSSEEESSSCTHHHHHHHHH
T ss_pred             cCCChhhEEEEeCC-HHHHHHHHHCCCeEEe--CC---CHHHH-----hhCCEEEecCCHHHHHHHHHh
Confidence            99999999999999 5999999999997665  22   22333     2455554  577788777764

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=98.67  E-value=2.5e-08  Score=89.18  Aligned_cols=125  Identities=13%  Similarity=0.004  Sum_probs=79.7

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhcc-------CCCccccCCCcHHHHHHHHHHh
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGST-------QREPLVVGKPSTFMMDYLANKF  189 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~-------~~~~~~~gKP~p~~~~~~~~~~  189 (257)
                      .++.+.+.+..|++.+-...|+||...... ...+...|+..+++......       -......+||+|.+|..+++++
T Consensus       257 ~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~-~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~  335 (415)
T 3p96_A          257 LMPGARTTLRTLRRLGYACGVVSGGFRRII-EPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRA  335 (415)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHH-HHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHH
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCcHHHH-HHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHHc
Confidence            445667777788764445778899755332 11222333322221100000       0112334899999999999999


Q ss_pred             CCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEEC--ChhhHHHHH
Q 025117          190 GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN--KISDFLSLK  253 (257)
Q Consensus       190 ~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~--~l~el~~~l  253 (257)
                      |++|++++||||+ .+|+.+|+++|+..++  .   ..+.+.     ..+++++.  ++.+++.++
T Consensus       336 gi~~~~~i~vGD~-~~Di~~a~~aG~~va~--~---~~~~~~-----~~ad~~i~~~~l~~ll~~l  390 (415)
T 3p96_A          336 GVPMAQTVAVGDG-ANDIDMLAAAGLGIAF--N---AKPALR-----EVADASLSHPYLDTVLFLL  390 (415)
T ss_dssp             TCCGGGEEEEECS-GGGHHHHHHSSEEEEE--S---CCHHHH-----HHCSEEECSSCTTHHHHHT
T ss_pred             CcChhhEEEEECC-HHHHHHHHHCCCeEEE--C---CCHHHH-----HhCCEEEccCCHHHHHHHh
Confidence            9999999999999 5999999999997775  2   222332     24677754  777777654

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=98.67  E-value=9.8e-10  Score=87.78  Aligned_cols=109  Identities=12%  Similarity=0.073  Sum_probs=75.3

Q ss_pred             CHHHHHHHHHHHHcC-CCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          117 NYYKVQYGTLCIREN-PGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~-~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      .++.+.+.+..|++. +..++|+||...... ...+...|+   |+.+...                 .++++++++|++
T Consensus        74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~-~~~l~~~gl---f~~i~~~-----------------~~~~~~~~~~~~  132 (193)
T 2i7d_A           74 PIPGALDAVREMNDLPDTQVFICTSPLLKYH-HCVGEKYRW---VEQHLGP-----------------QFVERIILTRDK  132 (193)
T ss_dssp             BCTTHHHHHHHHHTSTTEEEEEEECCCSSCT-TTHHHHHHH---HHHHHCH-----------------HHHTTEEECSCG
T ss_pred             cCcCHHHHHHHHHhCCCCeEEEEeCCChhhH-HHHHHHhCc---hhhhcCH-----------------HHHHHcCCCccc
Confidence            456788889999864 334788999877432 222233332   4544321                 267889999999


Q ss_pred             EEEEcCChhhH----HHHHH-HcCCeEEEEccCCCChhhhcCCCCCCCCcE-EECCh-hhHHHHHH
Q 025117          196 ICMVGDRLDTD----ILFGQ-NGGCKTLLVLSGVTSLSMLQSPNNSIQPDF-YTNKI-SDFLSLKA  254 (257)
Q Consensus       196 ~~~IGD~~~~D----i~~A~-~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~-~~~~l-~el~~~l~  254 (257)
                      |+||||++ .|    +.+|+ ++||++|++.++......       ..|++ .++++ .++.+++.
T Consensus       133 ~~~vgDs~-~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~~  190 (193)
T 2i7d_A          133 TVVLGDLL-IDDKDTVRGQEETPSWEHILFTCCHNRHLV-------LPPTRRRLLSWSDNWREILD  190 (193)
T ss_dssp             GGBCCSEE-EESSSCCCSSCSSCSSEEEEECCGGGTTCC-------CCTTSCEECSTTSCHHHHHH
T ss_pred             EEEECCch-hhCcHHHhhcccccccceEEEEeccCcccc-------cccchHHHhhHHHHHHHHhh
Confidence            99999995 78    99999 999999999876443211       24555 68999 66666553

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=98.64  E-value=6e-10  Score=89.38  Aligned_cols=110  Identities=12%  Similarity=0.022  Sum_probs=77.7

Q ss_pred             CCHHHHHHHHHHHHcC-CCceEEEecCCCccccCCCcccccCch-HHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCC
Q 025117          116 FNYYKVQYGTLCIREN-PGCLFIATNRDAVTHLTDAQEWAGGGS-MVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK  193 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~-~~~~~i~tn~d~~~~~~~~~~~~~~g~-~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~  193 (257)
                      ..++.+.+.+..|++. +-.+.|+||+..... ...+...++.. +|+                     ..++++++++|
T Consensus        75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~-~~~l~~~~l~~~~f~---------------------~~~~~~l~~~~  132 (197)
T 1q92_A           75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFK-YCPYEKYAWVEKYFG---------------------PDFLEQIVLTR  132 (197)
T ss_dssp             CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCS-SHHHHHHHHHHHHHC---------------------GGGGGGEEECS
T ss_pred             CcCcCHHHHHHHHHhcCCCeEEEEeCCccchH-HHHHHHhchHHHhch---------------------HHHHHHhccCC
Confidence            3567788899999874 335789999877432 11222222222 221                     56778899999


Q ss_pred             CcEEEEcCChhhH----HHHHH-HcCCeEEEEccCCCChhhhcCCCCCCCCcE-EECCh-hhHHHHHHh
Q 025117          194 SQICMVGDRLDTD----ILFGQ-NGGCKTLLVLSGVTSLSMLQSPNNSIQPDF-YTNKI-SDFLSLKAA  255 (257)
Q Consensus       194 ~~~~~IGD~~~~D----i~~A~-~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~-~~~~l-~el~~~l~~  255 (257)
                      ++|+||||++ .|    +.+|+ ++||++|++.++......       ..|++ .++++ .++.+++..
T Consensus       133 ~~~~~vgDs~-~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~-------~~~~~~~v~~~~~~l~~~l~~  193 (197)
T 1q92_A          133 DKTVVSADLL-IDDRPDITGAEPTPSWEHVLFTACHNQHLQ-------LQPPRRRLHSWADDWKAILDS  193 (197)
T ss_dssp             CSTTSCCSEE-EESCSCCCCSCSSCSSEEEEECCTTTTTCC-------CCTTCEEECCTTSCHHHHHHT
T ss_pred             ccEEEECccc-ccCCchhhhcccCCCceEEEecCccccccc-------ccccchhhhhHHHHHHHHhcc
Confidence            9999999995 88    99999 999999999987654211       34555 69999 588888763

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.63  E-value=2.1e-08  Score=80.59  Aligned_cols=109  Identities=15%  Similarity=0.121  Sum_probs=72.6

Q ss_pred             HHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCC
Q 025117          123 YGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDR  202 (257)
Q Consensus       123 ~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~  202 (257)
                      .++..|++.+-.+.|+||...... ...+...|+..+            ....||+|..+..++++++++|++++||||+
T Consensus        59 ~~l~~L~~~G~~~~ivT~~~~~~~-~~~l~~lgi~~~------------~~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~  125 (195)
T 3n07_A           59 YGVKALMNAGIEIAIITGRRSQIV-ENRMKALGISLI------------YQGQDDKVQAYYDICQKLAIAPEQTGYIGDD  125 (195)
T ss_dssp             HHHHHHHHTTCEEEEECSSCCHHH-HHHHHHTTCCEE------------ECSCSSHHHHHHHHHHHHCCCGGGEEEEESS
T ss_pred             HHHHHHHHCCCEEEEEECcCHHHH-HHHHHHcCCcEE------------eeCCCCcHHHHHHHHHHhCCCHHHEEEEcCC
Confidence            457778774445788898865332 111122222111            1225999999999999999999999999999


Q ss_pred             hhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECC------hhhHHHHHH
Q 025117          203 LDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK------ISDFLSLKA  254 (257)
Q Consensus       203 ~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~------l~el~~~l~  254 (257)
                       ..|+.+++++|+..+ +..  .. +.+.     ..+++++.+      +.++.+++.
T Consensus       126 -~nDi~~~~~ag~~va-~~n--a~-~~~~-----~~ad~v~~~~~~~G~~~~~~~~il  173 (195)
T 3n07_A          126 -LIDWPVMEKVALRVC-VAD--GH-PLLA-----QRANYVTHIKGGHGAVREVCDLIL  173 (195)
T ss_dssp             -GGGHHHHTTSSEEEE-CTT--SC-HHHH-----HHCSEECSSCTTTTHHHHHHHHHH
T ss_pred             -HHHHHHHHHCCCEEE-ECC--hH-HHHH-----HhCCEEEcCCCCCCHHHHHHHHHH
Confidence             599999999997643 322  22 2232     257888876      456666654

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=98.53  E-value=1.8e-08  Score=85.52  Aligned_cols=115  Identities=10%  Similarity=-0.004  Sum_probs=76.2

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++.+.+++..|++.+-.+.|+||...... ...+...|+..+|+.+            .|.  ....++++++.. ++
T Consensus       163 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~-~~~l~~~gl~~~f~~i------------~~~--~K~~~~~~l~~~-~~  226 (287)
T 3a1c_A          163 TLKESAKPAVQELKRMGIKVGMITGDNWRSA-EAISRELNLDLVIAEV------------LPH--QKSEEVKKLQAK-EV  226 (287)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHHHHTCSEEECSC------------CTT--CHHHHHHHHTTT-CC
T ss_pred             ccchhHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHhCCceeeeec------------ChH--HHHHHHHHHhcC-Ce
Confidence            4567888899999874445788899876432 1112223332222111            122  126788899998 99


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEE--CChhhHHHHHHhh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKAAA  256 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~--~~l~el~~~l~~~  256 (257)
                      |+||||+ .+|+.+|+++|+. +.+  |.... ..     ...|++++  +++.++.+++..+
T Consensus       227 ~~~vGDs-~~Di~~a~~ag~~-v~~--~~~~~-~~-----~~~ad~v~~~~~~~~l~~~l~~~  279 (287)
T 3a1c_A          227 VAFVGDG-INDAPALAQADLG-IAV--GSGSD-VA-----VESGDIVLIRDDLRDVVAAIQLS  279 (287)
T ss_dssp             EEEEECT-TTCHHHHHHSSEE-EEE--CCCSC-CS-----SCCSSEEESSSCTHHHHHHHHTT
T ss_pred             EEEEECC-HHHHHHHHHCCee-EEe--CCCCH-HH-----HhhCCEEEeCCCHHHHHHHHHHH
Confidence            9999999 5999999999996 444  32211 11     24799999  9999999887653

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=98.49  E-value=1e-07  Score=75.80  Aligned_cols=68  Identities=21%  Similarity=0.305  Sum_probs=55.3

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECC--hhhHHHH
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK--ISDFLSL  252 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~--l~el~~~  252 (257)
                      ++++|..+..+++++|++|++|++|||+ .+|+.+|++||+. +.+.    ..+.+.     ..|++++++  +.||.++
T Consensus       141 ~~~K~~~l~~~~~~lgi~~~~~~~iGD~-~~Di~~~~~ag~~-~~~~----~~~~~~-----~~a~~v~~~~~~~~l~~~  209 (211)
T 1l7m_A          141 ENAKGEILEKIAKIEGINLEDTVAVGDG-ANDISMFKKAGLK-IAFC----AKPILK-----EKADICIEKRDLREILKY  209 (211)
T ss_dssp             TTHHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHCSEE-EEES----CCHHHH-----TTCSEEECSSCGGGGGGG
T ss_pred             CccHHHHHHHHHHHcCCCHHHEEEEecC-hhHHHHHHHCCCE-EEEC----CCHHHH-----hhcceeecchhHHHHHHh
Confidence            5677899999999999999999999999 6999999999996 3333    223333     368999998  9998765


Q ss_pred             H
Q 025117          253 K  253 (257)
Q Consensus       253 l  253 (257)
                      +
T Consensus       210 l  210 (211)
T 1l7m_A          210 I  210 (211)
T ss_dssp             C
T ss_pred             h
Confidence            4

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=98.43  E-value=2.7e-07  Score=72.32  Aligned_cols=105  Identities=12%  Similarity=0.074  Sum_probs=70.6

Q ss_pred             HHHHHHHcCCCceEEEecCCCccccCCCcc--cccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEc
Q 025117          123 YGTLCIRENPGCLFIATNRDAVTHLTDAQE--WAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVG  200 (257)
Q Consensus       123 ~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~--~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IG  200 (257)
                      .++..|++.+-.+.|+||+ ...  ...+.  ..++. +            ..-.||+|..+..++++++++|++++|||
T Consensus        43 ~~L~~Lk~~Gi~~~I~Tg~-~~~--~~~l~~l~lgi~-~------------~~g~~~K~~~l~~~~~~~gi~~~~~~~vG  106 (168)
T 3ewi_A           43 IGISLLKKSGIEVRLISER-ACS--KQTLSALKLDCK-T------------EVSVSDKLATVDEWRKEMGLCWKEVAYLG  106 (168)
T ss_dssp             HHHHHHHHTTCEEEEECSS-CCC--HHHHHTTCCCCC-E------------ECSCSCHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred             HHHHHHHHCCCEEEEEeCc-HHH--HHHHHHhCCCcE-E------------EECCCChHHHHHHHHHHcCcChHHEEEEe
Confidence            3677888744447788998 311  11122  12221 1            11147889999999999999999999999


Q ss_pred             CChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECC------hhhHHHHH
Q 025117          201 DRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK------ISDFLSLK  253 (257)
Q Consensus       201 D~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~------l~el~~~l  253 (257)
                      |+ ..|+.+++.+|+.. .+..+   .+.+.     ..+++++.+      +.++.+++
T Consensus       107 D~-~nDi~~~~~ag~~~-a~~na---~~~~k-----~~Ad~v~~~~~~~G~~~~~~~~i  155 (168)
T 3ewi_A          107 NE-VSDEECLKRVGLSA-VPADA---CSGAQ-----KAVGYICKCSGGRGAIREFAEHI  155 (168)
T ss_dssp             CS-GGGHHHHHHSSEEE-ECTTC---CHHHH-----TTCSEECSSCTTTTHHHHHHHHH
T ss_pred             CC-HhHHHHHHHCCCEE-EeCCh---hHHHH-----HhCCEEeCCCCCccHHHHHHHHH
Confidence            99 59999999999874 45443   23343     367888876      44555544

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.32  E-value=8.2e-07  Score=72.73  Aligned_cols=71  Identities=18%  Similarity=0.141  Sum_probs=57.4

Q ss_pred             cCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHH
Q 025117          174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLS  251 (257)
Q Consensus       174 ~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~  251 (257)
                      .+||++..++.+++++|++++++++|||+ .+|+.+++.+|+. +.+.++  . +++.     ..|++++++..+  +.+
T Consensus       150 ~~~~K~~~~~~~~~~~~~~~~~~~~iGD~-~nD~~~~~~ag~~-v~~~~~--~-~~~~-----~~a~~v~~~~~e~Gv~~  219 (231)
T 1wr8_A          150 PWINKGSGIEKASEFLGIKPKEVAHVGDG-ENDLDAFKVVGYK-VAVAQA--P-KILK-----ENADYVTKKEYGEGGAE  219 (231)
T ss_dssp             TTCCHHHHHHHHHHHHTSCGGGEEEEECS-GGGHHHHHHSSEE-EECTTS--C-HHHH-----TTCSEECSSCHHHHHHH
T ss_pred             CCCChHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHcCCe-EEecCC--C-HHHH-----hhCCEEecCCCcchHHH
Confidence            48999999999999999999999999999 6999999999987 555544  2 3343     368999998766  555


Q ss_pred             HHH
Q 025117          252 LKA  254 (257)
Q Consensus       252 ~l~  254 (257)
                      .++
T Consensus       220 ~l~  222 (231)
T 1wr8_A          220 AIY  222 (231)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            444

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=98.27  E-value=1.1e-07  Score=77.37  Aligned_cols=101  Identities=6%  Similarity=-0.104  Sum_probs=66.7

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHH-HHhcc----CC--CccccCCCcHHHHHHHHHHh
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA-FVGST----QR--EPLVVGKPSTFMMDYLANKF  189 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~-i~~~~----~~--~~~~~gKP~p~~~~~~~~~~  189 (257)
                      .++.+.+.+..|++.+-.++|+||...... ...+...|+..++.. +....    +.  .....+||++..+..+++++
T Consensus        93 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~  171 (232)
T 3fvv_A           93 LTVQAVDVVRGHLAAGDLCALVTATNSFVT-APIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGM  171 (232)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHHT
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHHc
Confidence            477888899999874445778898876432 111222232211100 00000    10  12334678889999999999


Q ss_pred             C---CCCCcEEEEcCChhhHHHHHHHcCCeEEE
Q 025117          190 G---IQKSQICMVGDRLDTDILFGQNGGCKTLL  219 (257)
Q Consensus       190 ~---~~~~~~~~IGD~~~~Di~~A~~aG~~ti~  219 (257)
                      +   ++|++|+||||+ .+|+.+++++|+..+.
T Consensus       172 ~~~~~~~~~~~~vGDs-~~D~~~~~~ag~~~~~  203 (232)
T 3fvv_A          172 GLALGDFAESYFYSDS-VNDVPLLEAVTRPIAA  203 (232)
T ss_dssp             TCCGGGSSEEEEEECC-GGGHHHHHHSSEEEEE
T ss_pred             CCCcCchhheEEEeCC-HhhHHHHHhCCCeEEE
Confidence            9   999999999999 5999999999977654

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.24  E-value=2.1e-06  Score=71.49  Aligned_cols=74  Identities=18%  Similarity=0.235  Sum_probs=60.3

Q ss_pred             cccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--H
Q 025117          172 LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--F  249 (257)
Q Consensus       172 ~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l  249 (257)
                      ...++|++..++.+++++|++++++++|||+ ..|+.+++.+|+. +.  .|.... .+.     ..+++++++..+  +
T Consensus       182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~-~nD~~~~~~ag~~-v~--~~n~~~-~~~-----~~a~~v~~~~~~dGv  251 (261)
T 2rbk_A          182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDG-GNDISMLRHAAIG-VA--MGQAKE-DVK-----AAADYVTAPIDEDGI  251 (261)
T ss_dssp             ESTTCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSEE-EE--CTTSCH-HHH-----HHSSEECCCGGGTHH
T ss_pred             cCCCCChHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHcCce-EE--ecCccH-HHH-----hhCCEEeccCchhhH
Confidence            3458999999999999999999999999999 6999999999983 33  343333 333     368999999999  8


Q ss_pred             HHHHHh
Q 025117          250 LSLKAA  255 (257)
Q Consensus       250 ~~~l~~  255 (257)
                      .++++.
T Consensus       252 ~~~l~~  257 (261)
T 2rbk_A          252 SKAMKH  257 (261)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888765

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=98.20  E-value=5.1e-08  Score=81.51  Aligned_cols=113  Identities=12%  Similarity=-0.026  Sum_probs=68.1

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..|++.+-.+.|+||...... ...+...|+..+++.+..   .+.....||.|+.+            ++
T Consensus       145 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~-~~~~~~~gl~~~f~~~~~---~~k~~~~k~~~~~~------------~~  208 (280)
T 3skx_A          145 IRPESREAISKLKAIGIKCMMLTGDNRFVA-KWVAEELGLDDYFAEVLP---HEKAEKVKEVQQKY------------VT  208 (280)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHHHHTCSEEECSCCG---GGHHHHHHHHHTTS------------CE
T ss_pred             CCHhHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHHHcCChhHhHhcCH---HHHHHHHHHHHhcC------------CE
Confidence            456788888888874444678898766432 112223333333222211   11112234444332            79


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEE--CChhhHHHHHHh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKAA  255 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~--~~l~el~~~l~~  255 (257)
                      +||||+ .+|+.+|++||+   .|.+|....+..      ..+++++  +++.++.+++..
T Consensus       209 ~~vGD~-~nDi~~~~~Ag~---~va~~~~~~~~~------~~a~~~~~~~~~~~l~~~l~~  259 (280)
T 3skx_A          209 AMVGDG-VNDAPALAQADV---GIAIGAGTDVAV------ETADIVLVRNDPRDVAAIVEL  259 (280)
T ss_dssp             EEEECT-TTTHHHHHHSSE---EEECSCCSSSCC------CSSSEECSSCCTHHHHHHHHH
T ss_pred             EEEeCC-chhHHHHHhCCc---eEEecCCcHHHH------hhCCEEEeCCCHHHHHHHHHH
Confidence            999999 599999999995   555665433222      3567777  999999988764

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.13  E-value=3.4e-06  Score=71.20  Aligned_cols=73  Identities=12%  Similarity=0.175  Sum_probs=56.0

Q ss_pred             ccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HH
Q 025117          173 VVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FL  250 (257)
Q Consensus       173 ~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~  250 (257)
                      ..+||++..+..+++++|++|++|+||||+ .+|+.+++.+|+.   |..|....+ +.     ..+++++++..+  +.
T Consensus       207 ~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs-~~D~~~~~~ag~~---~~~~~~~~~-~~-----~~a~~v~~~~~~~gv~  276 (289)
T 3gyg_A          207 PIGTGKNEIVTFMLEKYNLNTERAIAFGDS-GNDVRMLQTVGNG---YLLKNATQE-AK-----NLHNLITDSEYSKGIT  276 (289)
T ss_dssp             ESCCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHTTSSEE---EECTTCCHH-HH-----HHCCCBCSSCHHHHHH
T ss_pred             eCCCCHHHHHHHHHHHcCCChhhEEEEcCC-HHHHHHHHhCCcE---EEECCccHH-HH-----HhCCEEcCCCCcCHHH
Confidence            358999999999999999999999999999 6999999999943   333444333 32     246888888766  55


Q ss_pred             HHHHh
Q 025117          251 SLKAA  255 (257)
Q Consensus       251 ~~l~~  255 (257)
                      +.++.
T Consensus       277 ~~~~~  281 (289)
T 3gyg_A          277 NTLKK  281 (289)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55554

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=98.06  E-value=4.1e-07  Score=82.87  Aligned_cols=42  Identities=29%  Similarity=0.491  Sum_probs=38.8

Q ss_pred             HHHHHHHhCCCCCcEEEEcCChhhHHHHHH-HcCCeEEEEccC
Q 025117          182 MDYLANKFGIQKSQICMVGDRLDTDILFGQ-NGGCKTLLVLSG  223 (257)
Q Consensus       182 ~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~-~aG~~ti~V~~G  223 (257)
                      +..+++.+|+.+++++||||++.+||.+|+ .+|++|++|..-
T Consensus       351 ~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE  393 (555)
T 2jc9_A          351 SDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE  393 (555)
T ss_dssp             HHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred             HHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence            588899999999999999999999999997 999999999753

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.05  E-value=8.6e-06  Score=67.75  Aligned_cols=72  Identities=14%  Similarity=0.131  Sum_probs=57.0

Q ss_pred             cCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHH
Q 025117          174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLS  251 (257)
Q Consensus       174 ~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~  251 (257)
                      .+++++..++.+++++|++++++++|||+ ..|+.+++.+|   +.|..|....+ +.     ..+++++++..|  +..
T Consensus       197 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~-~NDi~m~~~ag---~~vam~na~~~-~k-----~~A~~v~~~~~edGv~~  266 (274)
T 3fzq_A          197 KDFHKGKAIKRLQERLGVTQKETICFGDG-QNDIVMFQASD---VTIAMKNSHQQ-LK-----DIATSICEDIFDNGIYK  266 (274)
T ss_dssp             TTCSHHHHHHHHHHHHTCCSTTEEEECCS-GGGHHHHHTCS---EEEEETTSCHH-HH-----HHCSEEECCGGGTHHHH
T ss_pred             CCCCHHHHHHHHHHHcCCCHHHEEEECCC-hhHHHHHHhcC---ceEEecCccHH-HH-----HhhhheeCCCchhHHHH
Confidence            47888999999999999999999999999 69999999999   34445655544 33     258999998875  555


Q ss_pred             HHHh
Q 025117          252 LKAA  255 (257)
Q Consensus       252 ~l~~  255 (257)
                      .|+.
T Consensus       267 ~l~~  270 (274)
T 3fzq_A          267 ELKR  270 (274)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5543

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=97.99  E-value=1.8e-05  Score=66.18  Aligned_cols=72  Identities=15%  Similarity=0.247  Sum_probs=56.1

Q ss_pred             cCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHH
Q 025117          174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLS  251 (257)
Q Consensus       174 ~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~  251 (257)
                      .+++++..++.+++++|++++++++|||+ ..|+.+++.+|   +.|..|....+ +.     ..+++++++..+  +..
T Consensus       194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~-~NDi~m~~~ag---~~vam~na~~~-~k-----~~A~~v~~~~~e~Gv~~  263 (279)
T 4dw8_A          194 QGIDKALSLSVLLENIGMTREEVIAIGDG-YNDLSMIKFAG---MGVAMGNAQEP-VK-----KAADYITLTNDEDGVAE  263 (279)
T ss_dssp             TTCCHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSS---EEEECTTSCHH-HH-----HHCSEECCCGGGTHHHH
T ss_pred             CCCChHHHHHHHHHHcCCCHHHEEEECCC-hhhHHHHHHcC---cEEEcCCCcHH-HH-----HhCCEEcCCCCCcHHHH
Confidence            36788999999999999999999999999 69999999999   45555655444 33     258999988655  444


Q ss_pred             HHHh
Q 025117          252 LKAA  255 (257)
Q Consensus       252 ~l~~  255 (257)
                      .|+.
T Consensus       264 ~i~~  267 (279)
T 4dw8_A          264 AIER  267 (279)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4443

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=97.85  E-value=2.9e-05  Score=65.29  Aligned_cols=72  Identities=13%  Similarity=0.230  Sum_probs=55.4

Q ss_pred             ccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HH
Q 025117          173 VVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FL  250 (257)
Q Consensus       173 ~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~  250 (257)
                      ..+.+++..++.+++++|++++++++|||+ ..|+.+++.+|+ ++.+  |....+ +.     ..+++++.+..+  +.
T Consensus       198 ~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~-~NDi~m~~~ag~-~vam--~na~~~-~k-----~~Ad~v~~s~~edGv~  267 (290)
T 3dnp_A          198 PKGVSKEAGLALVASELGLSMDDVVAIGHQ-YDDLPMIELAGL-GVAM--GNAVPE-IK-----RKADWVTRSNDEQGVA  267 (290)
T ss_dssp             ETTCCHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHSSE-EEEC--TTSCHH-HH-----HHSSEECCCTTTTHHH
T ss_pred             ECCCCHHHHHHHHHHHcCCCHHHEEEECCc-hhhHHHHHhcCC-EEEe--cCCcHH-HH-----HhcCEECCCCCccHHH
Confidence            347788999999999999999999999999 699999999995 3333  443333 33     257999988776  55


Q ss_pred             HHHH
Q 025117          251 SLKA  254 (257)
Q Consensus       251 ~~l~  254 (257)
                      +.|+
T Consensus       268 ~~i~  271 (290)
T 3dnp_A          268 YMMK  271 (290)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5544

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=97.85  E-value=3.2e-05  Score=65.72  Aligned_cols=71  Identities=10%  Similarity=0.186  Sum_probs=55.0

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHH
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSL  252 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~  252 (257)
                      +.+++..++.+++++|++++++++|||+ ..|+.+++.+|+   .|..|....+ +.     ..+++++++..|  +.+.
T Consensus       226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs-~NDi~m~~~ag~---~vam~na~~~-~k-----~~Ad~v~~~~~edGv~~~  295 (304)
T 3l7y_A          226 GLHKGWALQQLLKRWNFTSDHLMAFGDG-GNDIEMLKLAKY---SYAMANAPKN-VK-----AAANYQAKSNDESGVLDV  295 (304)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHCTE---EEECTTSCHH-HH-----HHCSEECCCGGGTHHHHH
T ss_pred             CCCHHHHHHHHHHHhCcCHHHEEEECCC-HHHHHHHHhcCC---eEEcCCcCHH-HH-----HhccEEcCCCCcchHHHH
Confidence            5667889999999999999999999999 699999999994   3444544443 33     258999998776  5555


Q ss_pred             HHh
Q 025117          253 KAA  255 (257)
Q Consensus       253 l~~  255 (257)
                      |+.
T Consensus       296 l~~  298 (304)
T 3l7y_A          296 IDN  298 (304)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=97.78  E-value=4e-05  Score=64.01  Aligned_cols=71  Identities=10%  Similarity=0.152  Sum_probs=54.9

Q ss_pred             cCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHH
Q 025117          174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLS  251 (257)
Q Consensus       174 ~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~  251 (257)
                      .++|++..++.+++.+|++++++++|||+ ..|+.+++.+|+. +.+..  .. +++.     ..+++++.+..+  +.+
T Consensus       188 ~~~~K~~~~~~l~~~l~i~~~~~~~~GD~-~nD~~m~~~ag~~-va~~n--a~-~~~k-----~~a~~v~~~~~~dGVa~  257 (271)
T 1rlm_A          188 PGLHKANGISRLLKRWDLSPQNVVAIGDS-GNDAEMLKMARYS-FAMGN--AA-ENIK-----QIARYATDDNNHEGALN  257 (271)
T ss_dssp             TTCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHCSEE-EECTT--CC-HHHH-----HHCSEECCCGGGTHHHH
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCc-HHHHHHHHHcCCe-EEeCC--cc-HHHH-----HhCCeeCcCCCCChHHH
Confidence            48899999999999999999999999999 6999999999983 44433  33 2333     257899888755  444


Q ss_pred             HHH
Q 025117          252 LKA  254 (257)
Q Consensus       252 ~l~  254 (257)
                      .|+
T Consensus       258 ~l~  260 (271)
T 1rlm_A          258 VIQ  260 (271)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=97.73  E-value=9.5e-05  Score=62.13  Aligned_cols=72  Identities=21%  Similarity=0.297  Sum_probs=56.6

Q ss_pred             cCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHH
Q 025117          174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLS  251 (257)
Q Consensus       174 ~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~  251 (257)
                      .+.+++..++.+++++|++++++++|||+ ..|+.+.+.+| .++.+.++  .. ++.     ..++++.++..|  +..
T Consensus       208 ~~~~K~~~l~~l~~~lgi~~~e~ia~GD~-~NDi~ml~~ag-~~vam~na--~~-~~k-----~~A~~v~~s~~edGv~~  277 (283)
T 3dao_A          208 KGVSKWTALSYLIDRFDLLPDEVCCFGDN-LNDIEMLQNAG-ISYAVSNA--RQ-EVI-----AAAKHTCAPYWENGVLS  277 (283)
T ss_dssp             TTCCHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHSS-EEEEETTS--CH-HHH-----HHSSEEECCGGGTHHHH
T ss_pred             CCCcHHHHHHHHHHHhCCCHHHEEEECCC-HHHHHHHHhCC-CEEEcCCC--CH-HHH-----HhcCeECCCCCCChHHH
Confidence            36678899999999999999999999999 69999999999 34555443  33 333     258999998877  666


Q ss_pred             HHHh
Q 025117          252 LKAA  255 (257)
Q Consensus       252 ~l~~  255 (257)
                      .|+.
T Consensus       278 ~l~~  281 (283)
T 3dao_A          278 VLKS  281 (283)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6654

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.68  E-value=0.00013  Score=60.45  Aligned_cols=72  Identities=22%  Similarity=0.323  Sum_probs=55.1

Q ss_pred             cCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHH
Q 025117          174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLS  251 (257)
Q Consensus       174 ~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~  251 (257)
                      .+.+++..++.+++++|++++++++|||+ ..|+.+++.+|+.   |..|....+ +.     ..++++.++..|  +..
T Consensus       191 ~~~~K~~~l~~l~~~lgi~~~~~ia~GD~-~NDi~m~~~ag~~---vam~na~~~-~k-----~~Ad~v~~~~~edGv~~  260 (268)
T 3r4c_A          191 AGTSKATGLSLFADYYRVKVSEIMACGDG-GNDIPMLKAAGIG---VAMGNASEK-VQ-----SVADFVTDTVDNSGLYK  260 (268)
T ss_dssp             TTCCHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHSSEE---EECTTSCHH-HH-----HTCSEECCCTTTTHHHH
T ss_pred             CCCCHHHHHHHHHHHcCCCHHHEEEECCc-HHhHHHHHhCCCe---EEeCCCcHH-HH-----HhcCEeeCCCCcCHHHH
Confidence            36677899999999999999999999999 6999999999943   444444433 33     258999988765  555


Q ss_pred             HHHh
Q 025117          252 LKAA  255 (257)
Q Consensus       252 ~l~~  255 (257)
                      .|+.
T Consensus       261 ~l~~  264 (268)
T 3r4c_A          261 ALKH  264 (268)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5543

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=97.61  E-value=1.7e-05  Score=62.08  Aligned_cols=49  Identities=8%  Similarity=0.002  Sum_probs=39.8

Q ss_pred             CcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          194 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       194 ~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      ++|+||||+ ..|+.  +++| +++++.++....         ..|+++++++.||.++++.
T Consensus       129 ~~~l~ieDs-~~~i~--~aaG-~~i~~~~~~~~~---------~~~~~~i~~~~el~~~l~~  177 (180)
T 3bwv_A          129 LADYLIDDN-PKQLE--IFEG-KSIMFTASHNVY---------EHRFERVSGWRDVKNYFNS  177 (180)
T ss_dssp             CCSEEEESC-HHHHH--HCSS-EEEEECCGGGTT---------CCSSEEECSHHHHHHHHHH
T ss_pred             cccEEecCC-cchHH--HhCC-CeEEeCCCcccC---------CCCceecCCHHHHHHHHHH
Confidence            779999999 58885  5689 999998764311         3689999999999998865

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=97.59  E-value=8.9e-05  Score=61.82  Aligned_cols=71  Identities=15%  Similarity=0.223  Sum_probs=53.4

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHH
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSL  252 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~  252 (257)
                      +.+++..++.++++++++++++++|||+ ..|+.+++.+|+ +  |..|.... ++..     .+++++++..+  +.+.
T Consensus       188 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~-~nD~~~~~~ag~-~--v~~~n~~~-~~~~-----~a~~v~~~~~~dGv~~~  257 (268)
T 1nf2_A          188 NVDKGKALRFLRERMNWKKEEIVVFGDN-ENDLFMFEEAGL-R--VAMENAIE-KVKE-----ASDIVTLTNNDSGVSYV  257 (268)
T ss_dssp             TCCHHHHHHHHHHHHTCCGGGEEEEECS-HHHHHHHTTCSE-E--EECTTSCH-HHHH-----HCSEECCCTTTTHHHHH
T ss_pred             CCChHHHHHHHHHHcCCCHHHeEEEcCc-hhhHHHHHHcCC-E--EEecCCCH-HHHh-----hCCEEEccCCcchHHHH
Confidence            5567788999999999999999999999 699999999998 3  33454333 3332     47898887543  6555


Q ss_pred             HHh
Q 025117          253 KAA  255 (257)
Q Consensus       253 l~~  255 (257)
                      ++.
T Consensus       258 i~~  260 (268)
T 1nf2_A          258 LER  260 (268)
T ss_dssp             HTT
T ss_pred             HHH
Confidence            543

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=97.54  E-value=0.00014  Score=61.31  Aligned_cols=71  Identities=14%  Similarity=0.099  Sum_probs=54.8

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHH
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSL  252 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~  252 (257)
                      +-.+...++.+++.+|++++++++|||+ ..|+.+++.+|+ ++.+.++  . +++.     ..+++++++..+  +.+.
T Consensus       214 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~-~nD~~m~~~ag~-~va~~~~--~-~~~~-----~~a~~v~~~~~~dGVa~~  283 (288)
T 1nrw_A          214 KASKGQALKRLAKQLNIPLEETAAVGDS-LNDKSMLEAAGK-GVAMGNA--R-EDIK-----SIADAVTLTNDEHGVAHM  283 (288)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEESS-GGGHHHHHHSSE-EEECTTC--C-HHHH-----HHCSEECCCGGGTHHHHH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEEcCC-HHHHHHHHHcCc-EEEEcCC--C-HHHH-----hhCceeecCCCcChHHHH
Confidence            4455678999999999999999999999 699999999998 7777543  2 3343     248899888765  5555


Q ss_pred             HHh
Q 025117          253 KAA  255 (257)
Q Consensus       253 l~~  255 (257)
                      |+.
T Consensus       284 i~~  286 (288)
T 1nrw_A          284 MKH  286 (288)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            544

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=97.41  E-value=0.00065  Score=55.90  Aligned_cols=71  Identities=20%  Similarity=0.217  Sum_probs=53.1

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHH
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSL  252 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~  252 (257)
                      +-.+...++.+++.+|++++++++|||+ ..|+.+++.+|+.. .+  |.. .+++.     ..+++++++..+  +.+.
T Consensus       181 ~~~K~~~l~~l~~~lgi~~~~~ia~GDs-~NDi~ml~~ag~~v-am--~na-~~~~k-----~~A~~v~~~~~~dGva~~  250 (258)
T 2pq0_A          181 GGSKAEGIRMMIEKLGIDKKDVYAFGDG-LNDIEMLSFVGTGV-AM--GNA-HEEVK-----RVADFVTKPVDKEGIWYG  250 (258)
T ss_dssp             SCCHHHHHHHHHHHHTCCGGGEEEECCS-GGGHHHHHHSSEEE-EE--TTC-CHHHH-----HTCSEEECCGGGTHHHHH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCc-HHhHHHHHhCCcEE-Ee--CCC-cHHHH-----HhCCEEeCCCCcchHHHH
Confidence            3344677899999999999999999999 79999999999843 34  433 33444     258999988765  5555


Q ss_pred             HHh
Q 025117          253 KAA  255 (257)
Q Consensus       253 l~~  255 (257)
                      ++.
T Consensus       251 i~~  253 (258)
T 2pq0_A          251 LKQ  253 (258)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=97.39  E-value=0.00033  Score=58.76  Aligned_cols=71  Identities=18%  Similarity=0.197  Sum_probs=54.1

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHH
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSL  252 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~  252 (257)
                      +-+++..++.+++.+|++++++++|||+ ..|+.+++.+|+ ++.+.++  .. .+.     ..+++++++..+  +.+.
T Consensus       196 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~-~nD~~m~~~ag~-~va~~n~--~~-~~~-----~~a~~v~~~~~~dGV~~~  265 (282)
T 1rkq_A          196 RVNKGTGVKSLADVLGIKPEEIMAIGDQ-ENDIAMIEYAGV-GVAVDNA--IP-SVK-----EVANFVTKSNLEDGVAFA  265 (282)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSE-EEECTTS--CH-HHH-----HHCSEECCCTTTTHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCCHHHEEEECCc-HHHHHHHHHCCc-EEEecCC--cH-HHH-----hhCCEEecCCCcchHHHH
Confidence            4567788999999999999999999999 699999999997 5555433  22 333     257899887654  6665


Q ss_pred             HHh
Q 025117          253 KAA  255 (257)
Q Consensus       253 l~~  255 (257)
                      |+.
T Consensus       266 l~~  268 (282)
T 1rkq_A          266 IEK  268 (282)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=97.34  E-value=9.3e-05  Score=61.72  Aligned_cols=64  Identities=14%  Similarity=0.176  Sum_probs=42.2

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD  248 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e  248 (257)
                      +..++..++.+++++|++++++++|||+ ..|+.+++.+|+   .|..|....+ +.     ..+++++++..+
T Consensus       195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~-~NDi~m~~~ag~---~vam~na~~~-~k-----~~A~~v~~~~~e  258 (279)
T 3mpo_A          195 RASKGGTLSELVDQLGLTADDVMTLGDQ-GNDLTMIKYAGL---GVAMGNAIDE-VK-----EAAQAVTLTNAE  258 (279)
T ss_dssp             SCCHHHHHHHHHHHTTCCGGGEEEC--C-CTTHHHHHHSTE---ECBC---CCH-HH-----HHCSCBC-----
T ss_pred             CCChHHHHHHHHHHcCCCHHHEEEECCc-hhhHHHHHhcCc---eeeccCCCHH-HH-----HhcceeccCCCc
Confidence            4447899999999999999999999999 699999999994   4444544333 22     246777666443

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=97.34  E-value=0.00022  Score=58.13  Aligned_cols=71  Identities=15%  Similarity=0.209  Sum_probs=53.8

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHH
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSL  252 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~  252 (257)
                      +.+++..++.++++++++++++++|||+ ..|+.+++.+|+. +.+.++  .. .+.     ..+++++.+..+  +.+.
T Consensus       151 ~~~K~~~l~~l~~~~~~~~~~~~~iGD~-~nD~~m~~~ag~~-va~~n~--~~-~~k-----~~a~~v~~~~~~~Gv~~~  220 (227)
T 1l6r_A          151 GEDKAFAVNKLKEMYSLEYDEILVIGDS-NNDMPMFQLPVRK-ACPANA--TD-NIK-----AVSDFVSDYSYGEEIGQI  220 (227)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEECCS-GGGHHHHTSSSEE-EECTTS--CH-HHH-----HHCSEECSCCTTHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCcCHHHEEEECCc-HHhHHHHHHcCce-EEecCc--hH-HHH-----HhCCEEecCCCCcHHHHH
Confidence            5677788999999999999999999999 6999999999974 555433  22 333     257898877644  5555


Q ss_pred             HHh
Q 025117          253 KAA  255 (257)
Q Consensus       253 l~~  255 (257)
                      ++.
T Consensus       221 l~~  223 (227)
T 1l6r_A          221 FKH  223 (227)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.23  E-value=0.00063  Score=57.02  Aligned_cols=72  Identities=13%  Similarity=0.025  Sum_probs=50.7

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHH
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSL  252 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~  252 (257)
                      +.+++..++.+++.+|++++++++|||+ ..|+.+++.+|   +.|..|....+-...    ....+++.+-.|  +...
T Consensus       207 ~~~K~~al~~l~~~lgi~~~~~ia~GD~-~NDi~ml~~ag---~~vAm~Na~~~vk~~----A~~~~v~~sn~edGva~~  278 (285)
T 3pgv_A          207 GVSKGHALEAVAKMLGYTLSDCIAFGDG-MNDAEMLSMAG---KGCIMANAHQRLKDL----HPELEVIGSNADDAVPRY  278 (285)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHHSS---EEEECTTSCHHHHHH----CTTSEECCCGGGTHHHHH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCc-HhhHHHHHhcC---CEEEccCCCHHHHHh----CCCCEecccCCcchHHHH
Confidence            6677899999999999999999999999 69999999999   344455444442221    112356666544  4444


Q ss_pred             HH
Q 025117          253 KA  254 (257)
Q Consensus       253 l~  254 (257)
                      |+
T Consensus       279 i~  280 (285)
T 3pgv_A          279 LR  280 (285)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=97.12  E-value=0.00042  Score=58.89  Aligned_cols=70  Identities=19%  Similarity=0.236  Sum_probs=52.5

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEEC-Chhh--HHH
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN-KISD--FLS  251 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~-~l~e--l~~  251 (257)
                      +-++...++.+++.+|++++++++|||+ ..|+.+++.+|+ ++.+.++  .. .+.     ..++++++ +..+  +.+
T Consensus       222 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~-~nD~~m~~~ag~-~va~~na--~~-~~k-----~~a~~v~~~~~~~dGVa~  291 (301)
T 2b30_A          222 GHDKYTGINYLLKHYNISNDQVLVVGDA-ENDIAMLSNFKY-SFAVANA--TD-SAK-----SHAKCVLPVSHREGAVAY  291 (301)
T ss_dssp             TCCHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHSCSE-EEECTTC--CH-HHH-----HHSSEECSSCTTTTHHHH
T ss_pred             CCCcHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHcCC-eEEEcCC--cH-HHH-----hhCCEEEccCCCCcHHHH
Confidence            4567788999999999999999999999 699999999998 4555543  22 333     25788887 6543  554


Q ss_pred             HHH
Q 025117          252 LKA  254 (257)
Q Consensus       252 ~l~  254 (257)
                      .|+
T Consensus       292 ~l~  294 (301)
T 2b30_A          292 LLK  294 (301)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            444

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=97.04  E-value=3.2e-05  Score=64.57  Aligned_cols=101  Identities=11%  Similarity=-0.052  Sum_probs=58.3

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccc--cCCCcccccCc--hHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTH--LTDAQEWAGGG--SMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ  192 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~--~~~~~~~~~~g--~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~  192 (257)
                      .++.+.+++..|++.+..++|+||+.....  ....+...|+.  .+++.+..  +..   ..||.+.  ..++ ..+. 
T Consensus       102 ~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~--~~~---~~K~~~~--~~~~-~~~~-  172 (258)
T 2i33_A          102 ALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQ--DPK---EKGKEKR--RELV-SQTH-  172 (258)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEE--CTT---CCSSHHH--HHHH-HHHE-
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEEC--CCC---CCCcHHH--HHHH-HhCC-
Confidence            345677888888875445788899864211  01111222332  12221111  111   1577653  3332 2332 


Q ss_pred             CCcEEEEcCChhhHHHHHH-------H---------cCCeEEEEccCCCChh
Q 025117          193 KSQICMVGDRLDTDILFGQ-------N---------GGCKTLLVLSGVTSLS  228 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~-------~---------aG~~ti~V~~G~~~~~  228 (257)
                       ..++||||+ .+||.+|+       +         +|+++|.+.++.+...
T Consensus       173 -~~~l~VGDs-~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w  222 (258)
T 2i33_A          173 -DIVLFFGDN-LSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDW  222 (258)
T ss_dssp             -EEEEEEESS-GGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHH
T ss_pred             -CceEEeCCC-HHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcchh
Confidence             349999999 59999993       4         8999999988876554

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=97.00  E-value=0.00075  Score=55.42  Aligned_cols=75  Identities=16%  Similarity=0.135  Sum_probs=52.2

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCC--CCCCCCcEEECChhh--HH
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSP--NNSIQPDFYTNKISD--FL  250 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~--~~~~~pd~~~~~l~e--l~  250 (257)
                      +-+++..++.+++.+|++++++++|||+ ..|+.+.+.+|+ ++.+.  ... +++...  .....+++++++..+  +.
T Consensus       160 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~-~nD~~m~~~~g~-~va~~--na~-~~~k~~a~~~~~~a~~v~~~~~~dGva  234 (244)
T 1s2o_A          160 RSNKGNATQYLQQHLAMEPSQTLVCGDS-GNDIGLFETSAR-GVIVR--NAQ-PELLHWYDQWGDSRHYRAQSSHAGAIL  234 (244)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHTSSSE-EEECT--TCC-HHHHHHHHHHCCTTEEECSSCHHHHHH
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCc-hhhHHHHhccCc-EEEEc--CCc-HHHHHHHhcccccceeecCCcchhHHH
Confidence            4566788999999999999999999999 799999999987 45553  332 233320  000037888877655  45


Q ss_pred             HHHH
Q 025117          251 SLKA  254 (257)
Q Consensus       251 ~~l~  254 (257)
                      +.++
T Consensus       235 ~~i~  238 (244)
T 1s2o_A          235 EAIA  238 (244)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5544

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=96.65  E-value=0.001  Score=55.64  Aligned_cols=68  Identities=9%  Similarity=0.062  Sum_probs=42.0

Q ss_pred             CCCcHHHHHHHHHHhC-CCCCc--EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCc-EEECChh
Q 025117          175 GKPSTFMMDYLANKFG-IQKSQ--ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD-FYTNKIS  247 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~-~~~~~--~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd-~~~~~l~  247 (257)
                      +-++...++.+++.++ +++++  +++|||+ ..|+.+.+.+|+ ++.+.++....+++..   ...++ +++++..
T Consensus       187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~-~nD~~m~~~ag~-~va~~n~~~~~~~~~~---~~~a~~~v~~~~~  258 (275)
T 1xvi_A          187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDG-PNDAPLLEVMDY-AVIVKGLNREGVHLHD---EDPARVWRTQREG  258 (275)
T ss_dssp             TCCHHHHHHHHHHHHHHHHSSCCEEEEEESS-GGGHHHHHTSSE-EEECCCCC------------------------
T ss_pred             CCCHHHHHHHHHHHhhhcccccCcEEEECCC-hhhHHHHHhCCc-eEEecCCCccchhhcc---ccCCceeEccCCC
Confidence            5566788999999999 99999  9999999 699999999997 5778776543333321   01356 6665543

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=96.60  E-value=0.0012  Score=54.53  Aligned_cols=46  Identities=13%  Similarity=0.012  Sum_probs=40.1

Q ss_pred             CCcHHHHHHHHHHhCCCC--CcEEEEcCChhhHHHHHHHcCCeEEEEccC
Q 025117          176 KPSTFMMDYLANKFGIQK--SQICMVGDRLDTDILFGQNGGCKTLLVLSG  223 (257)
Q Consensus       176 KP~p~~~~~~~~~~~~~~--~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G  223 (257)
                      ++++..++.+++++|+++  +++++|||+ ..|+.+++.+|+. +.+..+
T Consensus       175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~-~nD~~m~~~ag~~-va~~na  222 (259)
T 3zx4_A          175 ADKGRAVARLRALWPDPEEARFAVGLGDS-LNDLPLFRAVDLA-VYVGRG  222 (259)
T ss_dssp             CCHHHHHHHHHHTCSSHHHHTSEEEEESS-GGGHHHHHTSSEE-EECSSS
T ss_pred             CCHHHHHHHHHHHhCCCCCCceEEEEeCC-HHHHHHHHhCCCe-EEeCCh
Confidence            677899999999999998  999999999 6999999999964 555544

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=96.58  E-value=3.3e-06  Score=67.68  Aligned_cols=91  Identities=12%  Similarity=-0.015  Sum_probs=62.6

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEE
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC  197 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  197 (257)
                      ++.+.+.+..+.+. --++|+||+...+. ...+...+...+|+.+.   .++.+..+|   ..|..+++++|.++++|+
T Consensus        70 RPgv~efL~~l~~~-~~i~I~Tss~~~~a-~~vl~~ld~~~~f~~~l---~rd~~~~~k---~~~lK~L~~Lg~~~~~~v  141 (195)
T 2hhl_A           70 RPHVDEFLQRMGQL-FECVLFTASLAKYA-DPVADLLDRWGVFRARL---FRESCVFHR---GNYVKDLSRLGRELSKVI  141 (195)
T ss_dssp             CTTHHHHHHHHHHH-SEEEEECSSCHHHH-HHHHHHHCCSSCEEEEE---CGGGCEEET---TEEECCGGGSSSCGGGEE
T ss_pred             CcCHHHHHHHHHcC-CeEEEEcCCCHHHH-HHHHHHhCCcccEEEEE---EcccceecC---CceeeeHhHhCCChhHEE
Confidence            46677888888763 45788899987653 22333444443333222   223323344   557788899999999999


Q ss_pred             EEcCChhhHHHHHHHcCCeE
Q 025117          198 MVGDRLDTDILFGQNGGCKT  217 (257)
Q Consensus       198 ~IGD~~~~Di~~A~~aG~~t  217 (257)
                      +|+|+ ..++.++.++|+..
T Consensus       142 ivDDs-~~~~~~~~~ngi~i  160 (195)
T 2hhl_A          142 IVDNS-PASYIFHPENAVPV  160 (195)
T ss_dssp             EEESC-GGGGTTCGGGEEEC
T ss_pred             EEECC-HHHhhhCccCccEE
Confidence            99999 69999999999875

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=96.10  E-value=1.4e-05  Score=63.25  Aligned_cols=92  Identities=11%  Similarity=-0.057  Sum_probs=60.7

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+.+..+.+. --+.|+||+...+.. ..+...+...+|+.+   ...+.....|   ..|...++++|.++++|
T Consensus        56 ~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~-~vl~~ld~~~~f~~~---~~rd~~~~~k---~~~~k~L~~Lg~~~~~~  127 (181)
T 2ght_A           56 KRPHVDEFLQRMGEL-FECVLFTASLAKYAD-PVADLLDKWGAFRAR---LFRESCVFHR---GNYVKDLSRLGRDLRRV  127 (181)
T ss_dssp             ECTTHHHHHHHHHHH-SEEEEECSSCHHHHH-HHHHHHCTTCCEEEE---ECGGGSEEET---TEEECCGGGTCSCGGGE
T ss_pred             eCCCHHHHHHHHHhC-CCEEEEcCCCHHHHH-HHHHHHCCCCcEEEE---EeccCceecC---CcEeccHHHhCCCcceE
Confidence            356677888888763 457888998876532 223333433233222   2222222233   45677888999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeE
Q 025117          197 CMVGDRLDTDILFGQNGGCKT  217 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~t  217 (257)
                      ++|||+ ..++.++.++|+..
T Consensus       128 vivdDs-~~~~~~~~~ngi~i  147 (181)
T 2ght_A          128 LILDNS-PASYVFHPDNAVPV  147 (181)
T ss_dssp             EEECSC-GGGGTTCTTSBCCC
T ss_pred             EEEeCC-HHHhccCcCCEeEe
Confidence            999999 69999999999983

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=96.03  E-value=0.0013  Score=54.03  Aligned_cols=64  Identities=13%  Similarity=-0.057  Sum_probs=45.8

Q ss_pred             CCcHHHHHHHHHHhCC-CCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh
Q 025117          176 KPSTFMMDYLANKFGI-QKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD  248 (257)
Q Consensus       176 KP~p~~~~~~~~~~~~-~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e  248 (257)
                      -.+...++.+++.+++ +++++++|||+ ..|+.+.+.+|+ ++.+.++  ..+++..     .+++++++..+
T Consensus       178 ~sKg~al~~l~~~~~~~~~~~viafGD~-~NDi~Ml~~ag~-~va~gna--~~~~~~~-----~a~~v~~~~~~  242 (249)
T 2zos_A          178 SDKGKAAKILLDFYKRLGQIESYAVGDS-YNDFPMFEVVDK-VFIVGSL--KHKKAQN-----VSSIIDVLEVI  242 (249)
T ss_dssp             CCHHHHHHHHHHHHHTTSCEEEEEEECS-GGGHHHHTTSSE-EEEESSC--CCTTEEE-----ESSHHHHHHHH
T ss_pred             CChHHHHHHHHHHhccCCCceEEEECCC-cccHHHHHhCCc-EEEeCCC--Cccccch-----hceEEeccccc
Confidence            3445778899999998 99999999999 799999999997 4555443  3233332     36666555443

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=95.83  E-value=0.023  Score=44.28  Aligned_cols=80  Identities=15%  Similarity=0.217  Sum_probs=56.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH-------------HHHHHHHHhcCCCCCCEEEEEcCH-
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS-------------FAAAAYLKSIDFPKDKKVYVVGED-   67 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~-------------~~~~~~l~~~~~~~~~~v~vlg~~-   67 (257)
                      |+++|+++.++||++...++.....|+++|+.---+.|+++.             ......+++.+.. ...++++|-. 
T Consensus        46 L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~-~~~~l~VGD~~  124 (189)
T 3ib6_A           46 VKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQID-KTEAVMVGNTF  124 (189)
T ss_dssp             HHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCC-GGGEEEEESBT
T ss_pred             HHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCC-cccEEEECCCc
Confidence            788999999999988888888889999999864444555443             2333444455553 3457778744 


Q ss_pred             -HHHHHHHHcCCeeeC
Q 025117           68 -GILKELELAGFQYLG   82 (257)
Q Consensus        68 -~~~~~l~~~g~~~~~   82 (257)
                       ......+.+|+..+.
T Consensus       125 ~~Di~~A~~aG~~~i~  140 (189)
T 3ib6_A          125 ESDIIGANRAGIHAIW  140 (189)
T ss_dssp             TTTHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHCCCeEEE
Confidence             567778889988764

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=95.60  E-value=0.0042  Score=55.81  Aligned_cols=41  Identities=24%  Similarity=0.390  Sum_probs=34.2

Q ss_pred             HHHHHHhCCCCCcEEEEcCChhhHHHHHHH-cCCeEEEEccC
Q 025117          183 DYLANKFGIQKSQICMVGDRLDTDILFGQN-GGCKTLLVLSG  223 (257)
Q Consensus       183 ~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~-aG~~ti~V~~G  223 (257)
                      ....+.+|..-.++++|||++..||..++. .|++|++|-.-
T Consensus       285 ~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  326 (470)
T 4g63_A          285 KKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  326 (470)
T ss_dssp             HHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred             HHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence            455566788888999999999999988865 79999999754

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=94.68  E-value=0.086  Score=37.97  Aligned_cols=76  Identities=17%  Similarity=0.152  Sum_probs=47.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|+++.++||++....+.+   |+++|+.---+.++++..         .....+++.+..+ ..++++| +....+
T Consensus        30 L~~~G~~~~i~S~~~~~~~~~~---l~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~~~~vgD~~~di~  105 (137)
T 2pr7_A           30 AKKNGVGTVILSNDPGGLGAAP---IRELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPM-RDCVLVDDSILNVR  105 (137)
T ss_dssp             HHHTTCEEEEEECSCCGGGGHH---HHHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCG-GGEEEEESCHHHHH
T ss_pred             HHHCCCEEEEEeCCCHHHHHHH---HHHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCc-ccEEEEcCCHHHHH
Confidence            6788999999999877665444   445565544466766532         2344445555433 4566777 445566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+..|+..+
T Consensus       106 ~a~~~G~~~i  115 (137)
T 2pr7_A          106 GAVEAGLVGV  115 (137)
T ss_dssp             HHHHHTCEEE
T ss_pred             HHHHCCCEEE
Confidence            6777887654

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=94.60  E-value=0.065  Score=41.96  Aligned_cols=76  Identities=17%  Similarity=0.219  Sum_probs=54.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEc-CHHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVG-EDGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~~~   80 (257)
                      |+++|+++.++||++.   ......++.+|++.-.+.+-.........+++.+.. ...++++| +......++.+|+.+
T Consensus        58 L~~~g~~~~ivTn~~~---~~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~~~~ag~~~  133 (191)
T 3n1u_A           58 LMAAGIQVAIITTAQN---AVVDHRMEQLGITHYYKGQVDKRSAYQHLKKTLGLN-DDEFAYIGDDLPDLPLIQQVGLGV  133 (191)
T ss_dssp             HHHTTCEEEEECSCCS---HHHHHHHHHHTCCEEECSCSSCHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHCCCeEEEEeCcCh---HHHHHHHHHcCCccceeCCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHHCCCEE
Confidence            6889999999999654   455566777888744444455667777777766654 34577777 667778888899776


Q ss_pred             e
Q 025117           81 L   81 (257)
Q Consensus        81 ~   81 (257)
                      .
T Consensus       134 ~  134 (191)
T 3n1u_A          134 A  134 (191)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=93.95  E-value=0.15  Score=38.21  Aligned_cols=76  Identities=11%  Similarity=0.177  Sum_probs=47.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEc-CHHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVG-EDGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~~~   80 (257)
                      |++.|+++.++||++.   ......++++|+..--+.--.........+++.+..+ ..++++| +......++..|+..
T Consensus        48 l~~~g~~~~i~T~~~~---~~~~~~l~~~gl~~~~~~~kp~~~~~~~~~~~~~~~~-~~~~~vGD~~~Di~~a~~ag~~~  123 (162)
T 2p9j_A           48 LQKMGITLAVISGRDS---APLITRLKELGVEEIYTGSYKKLEIYEKIKEKYSLKD-EEIGFIGDDVVDIEVMKKVGFPV  123 (162)
T ss_dssp             HHTTTCEEEEEESCCC---HHHHHHHHHTTCCEEEECC--CHHHHHHHHHHTTCCG-GGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHCCCEEEEEeCCCc---HHHHHHHHHcCCHhhccCCCCCHHHHHHHHHHcCCCH-HHEEEECCCHHHHHHHHHCCCeE
Confidence            6789999999999664   4455566778876211111233344555666665543 4566777 456677788888875


Q ss_pred             e
Q 025117           81 L   81 (257)
Q Consensus        81 ~   81 (257)
                      .
T Consensus       124 ~  124 (162)
T 2p9j_A          124 A  124 (162)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=93.92  E-value=0.053  Score=50.92  Aligned_cols=111  Identities=12%  Similarity=0.051  Sum_probs=64.6

Q ss_pred             CHHHHHHHHHHHHcCCCc-eEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          117 NYYKVQYGTLCIRENPGC-LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..++..++++.|++ .|+ ..++|+......              ..+....|.+.. +..-.|+--..+++.++.. ++
T Consensus       458 l~~~~~~~i~~L~~-~Gi~v~~~TGd~~~~a--------------~~ia~~lgi~~~-~~~~~P~~K~~~v~~l~~~-~~  520 (645)
T 3j08_A          458 LKESAKPAVQELKR-MGIKVGMITGDNWRSA--------------EAISRELNLDLV-IAEVLPHQKSEEVKKLQAK-EV  520 (645)
T ss_dssp             CTTTHHHHHHHHHH-TTCEEEEECSSCHHHH--------------HHHHHHHTCSEE-ECSCCTTCHHHHHHHHTTT-CC
T ss_pred             chhHHHHHHHHHHH-CCCEEEEEeCCCHHHH--------------HHHHHHcCCCEE-EEeCCHHhHHHHHHHHhhC-Ce
Confidence            34667888999987 455 556666544221              111111122211 1111122223445555545 88


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEE--CChhhHHHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKA  254 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~--~~l~el~~~l~  254 (257)
                      ++||||. ..|+.+.+.||   +.|..|..+.  ..    ...+|+++  +++.++.+.+.
T Consensus       521 v~~vGDg-~ND~~al~~A~---vgiamg~g~~--~a----~~~AD~vl~~~~~~~i~~~i~  571 (645)
T 3j08_A          521 VAFVGDG-INDAPALAQAD---LGIAVGSGSD--VA----VESGDIVLIRDDLRDVVAAIQ  571 (645)
T ss_dssp             EEEEECS-SSCHHHHHHSS---EEEEECCCSC--CS----SCCSSSEESSCCTTHHHHHHH
T ss_pred             EEEEeCC-HhHHHHHHhCC---EEEEeCCCcH--HH----HHhCCEEEecCCHHHHHHHHH
Confidence            9999999 69999999999   4454443222  11    14689998  78888887664

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=93.85  E-value=0.082  Score=43.81  Aligned_cols=40  Identities=18%  Similarity=0.402  Sum_probs=34.3

Q ss_pred             hhccCCcEEEEeCCCCc-CHHHHHHHHHhCCCCC-CCCceec
Q 025117            2 LRSKGKRLVFVTNNSTK-SRKQYGKKFETLGLTV-TEEEIFA   41 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~-~~~~~~~~L~~~G~~~-~~~~i~t   41 (257)
                      |++.|++++|+||.+.. +++...+.|+++||+. ..+.++.
T Consensus       113 L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lil  154 (260)
T 3pct_A          113 VNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLL  154 (260)
T ss_dssp             HHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEE
T ss_pred             HHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEe
Confidence            67899999999999888 8999999999999985 4446663

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=93.59  E-value=0.13  Score=40.72  Aligned_cols=76  Identities=17%  Similarity=0.127  Sum_probs=46.9

Q ss_pred             hhccCCcEEEEeCCCCcC------------HHHHHHHHHhCCCCCCCCceech---------------------HHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKS------------RKQYGKKFETLGLTVTEEEIFAS---------------------SFAAAA   48 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~------------~~~~~~~L~~~G~~~~~~~i~ts---------------------~~~~~~   48 (257)
                      |+++|+++.++||++..+            ...+.+.|+++|+.  -+.++.+                     ......
T Consensus        62 L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~  139 (211)
T 2gmw_A           62 LKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLS  139 (211)
T ss_dssp             HHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHH
T ss_pred             HHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCccCcCCCCCHHHHHH
Confidence            788999999999977533            35566778889986  2333321                     223333


Q ss_pred             HHHhcCCCCCCEEEEEc-CHHHHHHHHHcCCee
Q 025117           49 YLKSIDFPKDKKVYVVG-EDGILKELELAGFQY   80 (257)
Q Consensus        49 ~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~~~   80 (257)
                      .+++.+..+ ..++++| +.......+.+|+..
T Consensus       140 ~~~~lgi~~-~~~~~VGD~~~Di~~a~~aG~~~  171 (211)
T 2gmw_A          140 ARDYLHIDM-AASYMVGDKLEDMQAAVAANVGT  171 (211)
T ss_dssp             HHHHHTBCG-GGCEEEESSHHHHHHHHHTTCSE
T ss_pred             HHHHcCCCH-HHEEEEcCCHHHHHHHHHCCCce
Confidence            444445432 4566777 444556667788764

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=93.46  E-value=0.0024  Score=53.16  Aligned_cols=98  Identities=15%  Similarity=0.080  Sum_probs=54.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCc-cc--cCCCcccccCchHHHHHHhccCCCcccc--CCCcHHHHHHHHHHhC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAV-TH--LTDAQEWAGGGSMVGAFVGSTQREPLVV--GKPSTFMMDYLANKFG  190 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~-~~--~~~~~~~~~~g~~~~~i~~~~~~~~~~~--gKP~p~~~~~~~~~~~  190 (257)
                      ..++.+.+.+..|++.+..++|+||++.. ..  ....+...|+..+.+        +...+  +++++......+...|
T Consensus       101 ~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~--------~~Lilr~~~~~K~~~r~~L~~~g  172 (260)
T 3pct_A          101 AAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND--------KTLLLKKDKSNKSVRFKQVEDMG  172 (260)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST--------TTEEEESSCSSSHHHHHHHHTTT
T ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc--------ceeEecCCCCChHHHHHHHHhcC
Confidence            34566778888888744458889998653 10  011111222211000        01121  2555555555555545


Q ss_pred             CCCCcEEEEcCChhhHHHH--------HHHcCCeEEEEccCC
Q 025117          191 IQKSQICMVGDRLDTDILF--------GQNGGCKTLLVLSGV  224 (257)
Q Consensus       191 ~~~~~~~~IGD~~~~Di~~--------A~~aG~~ti~V~~G~  224 (257)
                      .  .-+++|||+ ..|+.+        +++++++++.+.+|.
T Consensus       173 y--~iv~~iGD~-~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~  211 (260)
T 3pct_A          173 Y--DIVLFVGDN-LNDFGDATYKKSNAERRDFVAKNSKAFGK  211 (260)
T ss_dssp             C--EEEEEEESS-GGGGCGGGTTCCHHHHHHHHHHTGGGBTT
T ss_pred             C--CEEEEECCC-hHHcCcccccCCHHHHHHHHHHHHHHhCC
Confidence            4  349999999 599998        777766665555553

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=93.25  E-value=0.035  Score=45.95  Aligned_cols=42  Identities=26%  Similarity=0.397  Sum_probs=35.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCC-CCCCceechH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASS   43 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~-~~~~~i~ts~   43 (257)
                      |+++|+++.|+||++...++.+.+.|..+|+. +..++++++.
T Consensus       113 L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~  155 (258)
T 2i33_A          113 TESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQD  155 (258)
T ss_dssp             HHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEEC
T ss_pred             HHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECC
Confidence            67899999999998888889999999999998 5667777554

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=93.19  E-value=0.028  Score=48.02  Aligned_cols=55  Identities=16%  Similarity=0.129  Sum_probs=40.2

Q ss_pred             CCCCCc----EEEEcCChhhHHHHHHHc----CCeEEEEccCCCChhhhcCCCCCCCCcEEECC--hhhHHHHHHh
Q 025117          190 GIQKSQ----ICMVGDRLDTDILFGQNG----GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK--ISDFLSLKAA  255 (257)
Q Consensus       190 ~~~~~~----~~~IGD~~~~Di~~A~~a----G~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~--l~el~~~l~~  255 (257)
                      ++++++    +++|||+ ..|+.+++.|    |+. +.+ ++   .+.+.     ..+++++.+  ...+..+|+.
T Consensus       214 gi~~~~~~~~via~GDs-~NDi~ml~~A~~~~g~~-vam-na---~~~lk-----~~Ad~v~~~~~~dGV~~~l~~  278 (332)
T 1y8a_A          214 GYCESKGIDFPVVVGDS-ISDYKMFEAARGLGGVA-IAF-NG---NEYAL-----KHADVVIISPTAMSEAKVIEL  278 (332)
T ss_dssp             HHHHHHTCSSCEEEECS-GGGHHHHHHHHHTTCEE-EEE-SC---CHHHH-----TTCSEEEECSSTHHHHHHHHH
T ss_pred             ccChhhcCceEEEEeCc-HhHHHHHHHHhhcCCeE-EEe-cC---CHHHH-----hhCcEEecCCCCCHHHHHHHH
Confidence            667888    9999999 6999999999    985 556 43   23444     368999877  5556555543

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=93.17  E-value=0.072  Score=44.20  Aligned_cols=40  Identities=18%  Similarity=0.349  Sum_probs=34.5

Q ss_pred             hhccCCcEEEEeCCCCc-CHHHHHHHHHhCCCCC-CCCceec
Q 025117            2 LRSKGKRLVFVTNNSTK-SRKQYGKKFETLGLTV-TEEEIFA   41 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~-~~~~~~~~L~~~G~~~-~~~~i~t   41 (257)
                      |+++|++++|+||.+.. .++...+.|+++||+. ..+.+++
T Consensus       113 L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lil  154 (262)
T 3ocu_A          113 VNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYL  154 (262)
T ss_dssp             HHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEE
T ss_pred             HHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceec
Confidence            67899999999998887 8999999999999985 5557764

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=92.65  E-value=0.93  Score=35.32  Aligned_cols=76  Identities=14%  Similarity=0.085  Sum_probs=52.4

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceech---------HHHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts---------~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|+++.++||+   ........|+.+|+.--.+.++++         .......+++.+..+ ..++++| +....+
T Consensus       103 l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~-~~~i~iGD~~~Di~  178 (233)
T 3s6j_A          103 LDKENLKWCIATSG---GIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPI-DECLVIGDAIWDML  178 (233)
T ss_dssp             HHHTTCCEEEECSS---CHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCG-GGEEEEESSHHHHH
T ss_pred             HHHCCCeEEEEeCC---chhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCH-HHEEEEeCCHHhHH
Confidence            67889999999995   455667778889987655666665         334555666666543 4567777 445666


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      .++.+|+..+
T Consensus       179 ~a~~aG~~~i  188 (233)
T 3s6j_A          179 AARRCKATGV  188 (233)
T ss_dssp             HHHHTTCEEE
T ss_pred             HHHHCCCEEE
Confidence            7788888654

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=92.61  E-value=0.066  Score=41.29  Aligned_cols=77  Identities=22%  Similarity=0.344  Sum_probs=45.0

Q ss_pred             hhccCCcEEEEeCCCCc------------CHHHHHHHHHhCCCCCCCCceech-----H---------HHHHHHHHhcCC
Q 025117            2 LRSKGKRLVFVTNNSTK------------SRKQYGKKFETLGLTVTEEEIFAS-----S---------FAAAAYLKSIDF   55 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~------------~~~~~~~~L~~~G~~~~~~~i~ts-----~---------~~~~~~l~~~~~   55 (257)
                      |++.|+++.++||++..            ....+...|+.+|+.  -+.|+.|     .         ......+++.+.
T Consensus        54 L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi  131 (176)
T 2fpr_A           54 LQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPKVKLVERYLAEQAM  131 (176)
T ss_dssp             HHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTSCGGGGGGC----C
T ss_pred             HHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCCHHHHHHHHHHcCC
Confidence            67889999999997543            345666778889987  4455433     1         111111222333


Q ss_pred             CCCCEEEEEc-CHHHHHHHHHcCCeee
Q 025117           56 PKDKKVYVVG-EDGILKELELAGFQYL   81 (257)
Q Consensus        56 ~~~~~v~vlg-~~~~~~~l~~~g~~~~   81 (257)
                      .+ ..++++| +....+..+.+|+..+
T Consensus       132 ~~-~~~l~VGD~~~Di~~A~~aG~~~i  157 (176)
T 2fpr_A          132 DR-ANSYVIGDRATDIQLAENMGINGL  157 (176)
T ss_dssp             CG-GGCEEEESSHHHHHHHHHHTSEEE
T ss_pred             CH-HHEEEEcCCHHHHHHHHHcCCeEE
Confidence            22 3466777 4445566677887754

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=92.42  E-value=0.25  Score=38.82  Aligned_cols=76  Identities=11%  Similarity=0.127  Sum_probs=50.4

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEc-CHHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVG-EDGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~~~   80 (257)
                      |+++|+++.++||++.   ......++++|++--...+-........++++.+..+ ..+.++| +......++..|+.+
T Consensus        64 L~~~G~~~~ivT~~~~---~~~~~~l~~lgi~~~~~~~k~k~~~~~~~~~~~~~~~-~~~~~vGD~~nDi~~~~~ag~~v  139 (195)
T 3n07_A           64 LMNAGIEIAIITGRRS---QIVENRMKALGISLIYQGQDDKVQAYYDICQKLAIAP-EQTGYIGDDLIDWPVMEKVALRV  139 (195)
T ss_dssp             HHHTTCEEEEECSSCC---HHHHHHHHHTTCCEEECSCSSHHHHHHHHHHHHCCCG-GGEEEEESSGGGHHHHTTSSEEE
T ss_pred             HHHCCCEEEEEECcCH---HHHHHHHHHcCCcEEeeCCCCcHHHHHHHHHHhCCCH-HHEEEEcCCHHHHHHHHHCCCEE
Confidence            7889999999999754   3445556778887322333445556666666666543 4566677 445677778888766


Q ss_pred             e
Q 025117           81 L   81 (257)
Q Consensus        81 ~   81 (257)
                      .
T Consensus       140 a  140 (195)
T 3n07_A          140 C  140 (195)
T ss_dssp             E
T ss_pred             E
Confidence            5

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=92.38  E-value=0.22  Score=37.38  Aligned_cols=76  Identities=17%  Similarity=0.155  Sum_probs=50.4

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcC-HHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGE-DGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~-~~~~~~l~~~g~~~   80 (257)
                      |+++|+++.++||++.   ......++++|++--.+.+-.........+++.+.. ...++++|- ......++..|+..
T Consensus        43 l~~~g~~~~i~T~~~~---~~~~~~~~~~gl~~~~~~~kpk~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~~~~ag~~~  118 (164)
T 3e8m_A           43 AHNKGIPVGILTGEKT---EIVRRRAEKLKVDYLFQGVVDKLSAAEELCNELGIN-LEQVAYIGDDLNDAKLLKRVGIAG  118 (164)
T ss_dssp             HHHTTCCEEEECSSCC---HHHHHHHHHTTCSEEECSCSCHHHHHHHHHHHHTCC-GGGEEEECCSGGGHHHHTTSSEEE
T ss_pred             HHHCCCEEEEEeCCCh---HHHHHHHHHcCCCEeecccCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeE
Confidence            7889999999999643   445556677888733333444555666666666653 346777774 45666777788765


Q ss_pred             e
Q 025117           81 L   81 (257)
Q Consensus        81 ~   81 (257)
                      .
T Consensus       119 ~  119 (164)
T 3e8m_A          119 V  119 (164)
T ss_dssp             C
T ss_pred             E
Confidence            4

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=92.03  E-value=0.0043  Score=51.62  Aligned_cols=97  Identities=18%  Similarity=0.113  Sum_probs=51.6

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCc-c--ccCCCcccccCchHHH-HHHhccCCCccccCCCc-HHHHHHHHHHhCC
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAV-T--HLTDAQEWAGGGSMVG-AFVGSTQREPLVVGKPS-TFMMDYLANKFGI  191 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~-~--~~~~~~~~~~~g~~~~-~i~~~~~~~~~~~gKP~-p~~~~~~~~~~~~  191 (257)
                      .++.+.+.+..|+..+..++|+||++.. .  .....+...|+-.+.+ .+...   .    .+|+ ...+..+.+. |.
T Consensus       102 ~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr---~----~~~~K~~~r~~l~~~-Gy  173 (262)
T 3ocu_A          102 AVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLK---K----DKSAKAARFAEIEKQ-GY  173 (262)
T ss_dssp             ECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEE---S----SCSCCHHHHHHHHHT-TE
T ss_pred             CCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceecc---C----CCCChHHHHHHHHhc-CC
Confidence            4556777888887644447888998653 1  0111122222211100 01100   0    1333 4444444443 44


Q ss_pred             CCCcEEEEcCChhhHHHH--------HHHcCCeEEEEccCC
Q 025117          192 QKSQICMVGDRLDTDILF--------GQNGGCKTLLVLSGV  224 (257)
Q Consensus       192 ~~~~~~~IGD~~~~Di~~--------A~~aG~~ti~V~~G~  224 (257)
                      .  -+++|||++ .|+.+        +++++++++.+.+|.
T Consensus       174 ~--iv~~vGD~~-~Dl~~~~~~~~~~~r~a~v~~~~~~fG~  211 (262)
T 3ocu_A          174 E--IVLYVGDNL-DDFGNTVYGKLNADRRAFVDQNQGKFGK  211 (262)
T ss_dssp             E--EEEEEESSG-GGGCSTTTTCCHHHHHHHHHHTGGGBTT
T ss_pred             C--EEEEECCCh-HHhccccccCCHHHHHHHHHHHHHHhCC
Confidence            3  399999995 99998        677766665555553

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=91.92  E-value=0.76  Score=35.25  Aligned_cols=77  Identities=13%  Similarity=0.084  Sum_probs=46.8

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCce--echHH--HHHHHHHhcCCCCCCEEEEEc-CHHHHHHHHHc
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEI--FASSF--AAAAYLKSIDFPKDKKVYVVG-EDGILKELELA   76 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i--~ts~~--~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l~~~   76 (257)
                      |+++|+++.++||++.  +......|+.+|+.---+.+  ++...  .....+++.+..+ ..++++| +....+..+.+
T Consensus        80 L~~~G~~v~ivT~~~~--~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~-~~~~~igD~~~Di~~a~~a  156 (187)
T 2wm8_A           80 LQSLGVPGAAASRTSE--IEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPF-SQMIFFDDERRNIVDVSKL  156 (187)
T ss_dssp             HHHHTCCEEEEECCSC--HHHHHHHHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCCG-GGEEEEESCHHHHHHHHTT
T ss_pred             HHHCCceEEEEeCCCC--hHHHHHHHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCCh-HHEEEEeCCccChHHHHHc
Confidence            6788999999999653  45566667888886333332  22222  2233344555533 4566777 44455667778


Q ss_pred             CCeee
Q 025117           77 GFQYL   81 (257)
Q Consensus        77 g~~~~   81 (257)
                      |+..+
T Consensus       157 G~~~i  161 (187)
T 2wm8_A          157 GVTCI  161 (187)
T ss_dssp             TCEEE
T ss_pred             CCEEE
Confidence            87764

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=91.49  E-value=0.96  Score=34.51  Aligned_cols=77  Identities=9%  Similarity=0.111  Sum_probs=52.1

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|.++.++||+   +.......|+.+|+.---+.++++.         ......+++.+..+ ..++++| +....+
T Consensus       101 l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~~~iGD~~~Di~  176 (214)
T 3e58_A          101 VKSQGLEIGLASSS---VKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQA-SRALIIEDSEKGIA  176 (214)
T ss_dssp             HHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCG-GGEEEEECSHHHHH
T ss_pred             HHHCCCCEEEEeCC---cHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCCh-HHeEEEeccHhhHH
Confidence            67889999999996   4556667788889864445555542         24555566656543 4567777 445667


Q ss_pred             HHHHcCCeeeC
Q 025117           72 ELELAGFQYLG   82 (257)
Q Consensus        72 ~l~~~g~~~~~   82 (257)
                      .++.+|+..+.
T Consensus       177 ~a~~aG~~~~~  187 (214)
T 3e58_A          177 AGVAADVEVWA  187 (214)
T ss_dssp             HHHHTTCEEEE
T ss_pred             HHHHCCCEEEE
Confidence            78889987653

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=91.16  E-value=0.34  Score=37.50  Aligned_cols=77  Identities=17%  Similarity=0.141  Sum_probs=48.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcC-HHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGE-DGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~-~~~~~~l~~~g~~~   80 (257)
                      |++.|++++++||++..   .....++++|++---...-.........+++.+.. ...++++|- ......++..|+..
T Consensus        65 L~~~g~~v~ivT~~~~~---~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~g~~-~~~~~~iGD~~~Di~~a~~ag~~~  140 (188)
T 2r8e_A           65 ALTSDIEVAIITGRKAK---LVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIA-PENVAYVGDDLIDWPVMEKVGLSV  140 (188)
T ss_dssp             HHTTTCEEEEECSSCCH---HHHHHHHHHTCCEEECSCSCSHHHHHHHHHHHTCC-GGGEEEEESSGGGHHHHTTSSEEE
T ss_pred             HHHCCCeEEEEeCCChH---HHHHHHHHcCCceeecCCCCCHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCEE
Confidence            67899999999997654   44455566787621122233445566666665553 245778884 45666777888776


Q ss_pred             eC
Q 025117           81 LG   82 (257)
Q Consensus        81 ~~   82 (257)
                      ..
T Consensus       141 ~~  142 (188)
T 2r8e_A          141 AV  142 (188)
T ss_dssp             EC
T ss_pred             Ee
Confidence            53

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=90.78  E-value=0.5  Score=36.18  Aligned_cols=76  Identities=11%  Similarity=0.179  Sum_probs=48.2

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEc-CHHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVG-EDGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~~~   80 (257)
                      |+++|++++++||++..   .....++.+|++--.+............+++.+..+ ..++++| +......++..|+.+
T Consensus        47 L~~~G~~~~i~Tg~~~~---~~~~~~~~lgl~~~~~~~k~k~~~~~~~~~~~~~~~-~~~~~vGD~~~Di~~~~~ag~~~  122 (180)
T 1k1e_A           47 LMDADIQVAVLSGRDSP---ILRRRIADLGIKLFFLGKLEKETACFDLMKQAGVTA-EQTAYIGDDSVDLPAFAACGTSF  122 (180)
T ss_dssp             HHHTTCEEEEEESCCCH---HHHHHHHHHTCCEEEESCSCHHHHHHHHHHHHTCCG-GGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHCCCeEEEEeCCCcH---HHHHHHHHcCCceeecCCCCcHHHHHHHHHHcCCCH-HHEEEECCCHHHHHHHHHcCCeE
Confidence            67899999999996544   444556677875211222334445555566555533 4567777 445677788889876


Q ss_pred             e
Q 025117           81 L   81 (257)
Q Consensus        81 ~   81 (257)
                      .
T Consensus       123 ~  123 (180)
T 1k1e_A          123 A  123 (180)
T ss_dssp             E
T ss_pred             E
Confidence            5

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=90.74  E-value=0.28  Score=38.78  Aligned_cols=76  Identities=20%  Similarity=0.182  Sum_probs=46.7

Q ss_pred             hhccCCcEEEEeCCCCcCH------------HHHHHHHHhCCCCCCCCceech---------------------HHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSR------------KQYGKKFETLGLTVTEEEIFAS---------------------SFAAAA   48 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~------------~~~~~~L~~~G~~~~~~~i~ts---------------------~~~~~~   48 (257)
                      |+++|++++++||++..++            +.+.+.|+++|+.++  .++.+                     ......
T Consensus        68 L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~--~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~  145 (218)
T 2o2x_A           68 ANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD--MVLACAYHEAGVGPLAIPDHPMRKPNPGMLVE  145 (218)
T ss_dssp             HHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS--EEEEECCCTTCCSTTCCSSCTTSTTSCHHHHH
T ss_pred             HHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee--eEEEeecCCCCceeecccCCccCCCCHHHHHH
Confidence            7789999999999765321            456677888997522  22211                     123334


Q ss_pred             HHHhcCCCCCCEEEEEc-CHHHHHHHHHcCCee
Q 025117           49 YLKSIDFPKDKKVYVVG-EDGILKELELAGFQY   80 (257)
Q Consensus        49 ~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~~~   80 (257)
                      .+++.+..+ .+++++| +.......+.+|+..
T Consensus       146 ~~~~~~i~~-~~~~~VGD~~~Di~~a~~aG~~~  177 (218)
T 2o2x_A          146 AGKRLALDL-QRSLIVGDKLADMQAGKRAGLAQ  177 (218)
T ss_dssp             HHHHHTCCG-GGCEEEESSHHHHHHHHHTTCSE
T ss_pred             HHHHcCCCH-HHEEEEeCCHHHHHHHHHCCCCE
Confidence            445555533 4567777 445566678889865

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=90.39  E-value=1.2  Score=35.03  Aligned_cols=76  Identities=24%  Similarity=0.250  Sum_probs=48.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceech---------HHHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts---------~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|+++.++||++   .......|+.+|+.---+.++++         .......+++.+..+ ..++++| +.....
T Consensus        95 l~~~g~~~~i~s~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~~~~vGD~~~Di~  170 (222)
T 2nyv_A           95 LKSKGFKLAVVSNKL---EELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEP-EKALIVGDTDADIE  170 (222)
T ss_dssp             HHHTTCEEEEECSSC---HHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCG-GGEEEEESSHHHHH
T ss_pred             HHHCCCeEEEEcCCC---HHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCc-hhEEEECCCHHHHH
Confidence            677899999999953   44555667888875333445543         334445555555533 4577777 445566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      .++.+|+..+
T Consensus       171 ~a~~aG~~~i  180 (222)
T 2nyv_A          171 AGKRAGTKTA  180 (222)
T ss_dssp             HHHHHTCEEE
T ss_pred             HHHHCCCeEE
Confidence            6788898743

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=90.02  E-value=1.2  Score=35.06  Aligned_cols=76  Identities=13%  Similarity=0.113  Sum_probs=49.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEcC-HHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVGE-DGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg~-~~~~~   71 (257)
                      |++.|+++.++||++   .......|+.+|+.---+.++++..         .....+++.+..+ ..++++|- ....+
T Consensus       117 l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~~~~iGD~~~Di~  192 (240)
T 2no4_A          117 LKSAGYIVAILSNGN---DEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNP-NEVCFVSSNAWDLG  192 (240)
T ss_dssp             HHHTTCEEEEEESSC---HHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCG-GGEEEEESCHHHHH
T ss_pred             HHHCCCEEEEEcCCC---HHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCc-ccEEEEeCCHHHHH
Confidence            678899999999953   4456667788898644456665432         3444455555543 45677773 34466


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      .++.+|+...
T Consensus       193 ~a~~aG~~~~  202 (240)
T 2no4_A          193 GAGKFGFNTV  202 (240)
T ss_dssp             HHHHHTCEEE
T ss_pred             HHHHCCCEEE
Confidence            6788897765

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=89.97  E-value=0.4  Score=45.57  Aligned_cols=109  Identities=13%  Similarity=0.073  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHcCCCc-eEEEecCCCccccCCCcccccCchHHHHHHhccCCCcccc-CCCcHHHHHHHHHHhCCCCCc
Q 025117          118 YYKVQYGTLCIRENPGC-LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVV-GKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~-gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      .++..++++.|++ .|+ ..++|+..... .             ..+....|.+.... -.|.  --..+++.++-. ++
T Consensus       537 ~~~~~~~i~~l~~-~Gi~v~~~TGd~~~~-a-------------~~ia~~lgi~~~~~~~~P~--~K~~~v~~l~~~-~~  598 (723)
T 3j09_A          537 KESAKPAVQELKR-MGIKVGMITGDNWRS-A-------------EAISRELNLDLVIAEVLPH--QKSEEVKKLQAK-EV  598 (723)
T ss_dssp             CTTHHHHHHHHHH-TTCEEEEECSSCHHH-H-------------HHHHHHHTCSEEECSCCTT--CHHHHHHHHTTT-CC
T ss_pred             chhHHHHHHHHHH-CCCEEEEECCCCHHH-H-------------HHHHHHcCCcEEEccCCHH--HHHHHHHHHhcC-Ce
Confidence            3567788888887 455 45566644321 1             11111112221111 1222  123444555544 88


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEE--CChhhHHHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKA  254 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~--~~l~el~~~l~  254 (257)
                      ++||||. ..|+.+-+.||   +.|.-|..+.  ..    ...+|+++  +++..+.+.+.
T Consensus       599 v~~vGDg-~ND~~al~~A~---vgiamg~g~~--~a----~~~AD~vl~~~~~~~i~~~i~  649 (723)
T 3j09_A          599 VAFVGDG-INDAPALAQAD---LGIAVGSGSD--VA----VESGDIVLIRDDLRDVVAAIQ  649 (723)
T ss_dssp             EEEEECS-STTHHHHHHSS---EEEECCCCSC--CS----SCCSSEECSSCCTTHHHHHHH
T ss_pred             EEEEECC-hhhHHHHhhCC---EEEEeCCCcH--HH----HHhCCEEEeCCCHHHHHHHHH
Confidence            9999999 69999999999   3444442221  11    24789998  78888877664

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=89.79  E-value=1.3  Score=34.38  Aligned_cols=77  Identities=14%  Similarity=0.186  Sum_probs=50.1

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceech---------HHHHHHHHHhcCCCCCCEEEEEcC-HHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKKVYVVGE-DGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts---------~~~~~~~l~~~~~~~~~~v~vlg~-~~~~~   71 (257)
                      |++.|.++.++||++   .+.....|+.+|+.-.-+.++++         .......+++.+..+ ..++++|- ....+
T Consensus       108 l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~~~iGD~~~Di~  183 (230)
T 3um9_A          108 LRAAGLKTAILSNGS---RHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGE-SEILFVSCNSWDAT  183 (230)
T ss_dssp             HHHTTCEEEEEESSC---HHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCG-GGEEEEESCHHHHH
T ss_pred             HHhCCCeEEEEeCCC---HHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCc-ccEEEEeCCHHHHH
Confidence            678899999999964   45566667888886444556554         234445555556543 45677774 34566


Q ss_pred             HHHHcCCeeeC
Q 025117           72 ELELAGFQYLG   82 (257)
Q Consensus        72 ~l~~~g~~~~~   82 (257)
                      .++.+|+....
T Consensus       184 ~a~~aG~~~~~  194 (230)
T 3um9_A          184 GAKYFGYPVCW  194 (230)
T ss_dssp             HHHHHTCCEEE
T ss_pred             HHHHCCCEEEE
Confidence            67888987653

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=89.53  E-value=0.82  Score=35.35  Aligned_cols=76  Identities=13%  Similarity=0.142  Sum_probs=48.3

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEc-CHHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVG-EDGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~~~   80 (257)
                      |+++|+++.++||++..   .....++++|+.---+.+-.-.......+++.+.. ...+.++| +......++.+|+.+
T Consensus        58 L~~~g~~~~i~T~~~~~---~~~~~~~~lgl~~~f~~~~~K~~~~~~~~~~~g~~-~~~~~~vGD~~nDi~~~~~ag~~~  133 (189)
T 3mn1_A           58 LIASGVTTAIISGRKTA---IVERRAKSLGIEHLFQGREDKLVVLDKLLAELQLG-YEQVAYLGDDLPDLPVIRRVGLGM  133 (189)
T ss_dssp             HHHTTCEEEEECSSCCH---HHHHHHHHHTCSEEECSCSCHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHCCCEEEEEECcChH---HHHHHHHHcCCHHHhcCcCChHHHHHHHHHHcCCC-hhHEEEECCCHHHHHHHHHCCCeE
Confidence            78899999999996543   44455667788622222333334455555555553 34567777 445677788888776


Q ss_pred             e
Q 025117           81 L   81 (257)
Q Consensus        81 ~   81 (257)
                      .
T Consensus       134 ~  134 (189)
T 3mn1_A          134 A  134 (189)
T ss_dssp             E
T ss_pred             E
Confidence            5

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=89.11  E-value=1.6  Score=35.30  Aligned_cols=76  Identities=18%  Similarity=0.198  Sum_probs=51.2

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHH---------HHHHHHhcCCCCCCEEEEEcCH--HHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA---------AAAYLKSIDFPKDKKVYVVGED--GIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~---------~~~~l~~~~~~~~~~v~vlg~~--~~~   70 (257)
                      |++.|+++.++||.. ..   +...|+.+|+.---+.++++...         ....+++.+.. ...++++|-.  ...
T Consensus       118 l~~~g~~~~i~tn~~-~~---~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~-~~~~~~vGD~~~~Di  192 (263)
T 3k1z_A          118 CRTRGLRLAVISNFD-RR---LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHME-PVVAAHVGDNYLCDY  192 (263)
T ss_dssp             HHHTTCEEEEEESCC-TT---HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCC-GGGEEEEESCHHHHT
T ss_pred             HHhCCCcEEEEeCCc-HH---HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCC-HHHEEEECCCcHHHH
Confidence            678899999999944 32   46778889987555677776432         33344444553 3457778754  456


Q ss_pred             HHHHHcCCeeeC
Q 025117           71 KELELAGFQYLG   82 (257)
Q Consensus        71 ~~l~~~g~~~~~   82 (257)
                      +..+.+|+..+.
T Consensus       193 ~~a~~aG~~~i~  204 (263)
T 3k1z_A          193 QGPRAVGMHSFL  204 (263)
T ss_dssp             HHHHTTTCEEEE
T ss_pred             HHHHHCCCEEEE
Confidence            778889987764

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=88.89  E-value=1.8  Score=33.71  Aligned_cols=77  Identities=19%  Similarity=0.253  Sum_probs=51.2

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|+++.++||+   +.......|+.+|+.---+.++++.         ......+++.+..+...++++| +....+
T Consensus       115 l~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~  191 (231)
T 3kzx_A          115 LKENNITMAIVSNK---NGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQ  191 (231)
T ss_dssp             HHHTTCEEEEEEEE---EHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHH
T ss_pred             HHHCCCeEEEEECC---CHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHH
Confidence            67889999999995   4456667788889864445555432         3445555555664442577777 445677


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      .++.+|+..+
T Consensus       192 ~a~~aG~~~v  201 (231)
T 3kzx_A          192 SAIEAGCLPI  201 (231)
T ss_dssp             HHHHTTCEEE
T ss_pred             HHHHCCCeEE
Confidence            7888997665

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=88.82  E-value=1.5  Score=34.34  Aligned_cols=77  Identities=13%  Similarity=0.162  Sum_probs=48.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEcC-HHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVGE-DGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg~-~~~~~   71 (257)
                      |++.|+++.++||++   .......|+.+|+.---+.++++.         ......+++.+..+ ..++++|- .....
T Consensus       107 l~~~g~~~~i~t~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~~~~iGD~~~Di~  182 (232)
T 1zrn_A          107 LKRRGLKLAILSNGS---PQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDR-SAILFVASNAWDAT  182 (232)
T ss_dssp             HHHTTCEEEEEESSC---HHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCG-GGEEEEESCHHHHH
T ss_pred             HHHCCCEEEEEeCCC---HHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCc-ccEEEEeCCHHHHH
Confidence            678899999999954   445566678888864345555432         23344445555533 45667773 34466


Q ss_pred             HHHHcCCeeeC
Q 025117           72 ELELAGFQYLG   82 (257)
Q Consensus        72 ~l~~~g~~~~~   82 (257)
                      .++.+|+....
T Consensus       183 ~a~~aG~~~~~  193 (232)
T 1zrn_A          183 GARYFGFPTCW  193 (232)
T ss_dssp             HHHHHTCCEEE
T ss_pred             HHHHcCCEEEE
Confidence            67888987653

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=88.74  E-value=2.5  Score=32.12  Aligned_cols=75  Identities=17%  Similarity=0.148  Sum_probs=46.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.| ++.++||++   .......|+.+|+.---+.++++..         .....+++.+..+ ..++++| +....+
T Consensus        98 l~~~g-~~~i~s~~~---~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~~~~vgD~~~Di~  172 (200)
T 3cnh_A           98 LGQRY-RMYSLNNEG---RDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRP-EEAVMVDDRLQNVQ  172 (200)
T ss_dssp             HTTTS-EEEEEECCC---HHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCG-GGEEEEESCHHHHH
T ss_pred             HHHcC-CEEEEeCCc---HHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCH-HHeEEeCCCHHHHH
Confidence            67789 999999954   4445556677787644466666543         2333444445433 4566777 344566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      .++.+|+...
T Consensus       173 ~a~~aG~~~~  182 (200)
T 3cnh_A          173 AARAVGMHAV  182 (200)
T ss_dssp             HHHHTTCEEE
T ss_pred             HHHHCCCEEE
Confidence            6777887654

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=88.64  E-value=2.4  Score=32.91  Aligned_cols=77  Identities=16%  Similarity=0.183  Sum_probs=50.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEcCH-HHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVGED-GILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg~~-~~~~   71 (257)
                      |++.|+++.++||++   .......|+.+|+.---+.++++.         ......+++.+..+ ..++++|-. ....
T Consensus       111 l~~~g~~~~i~t~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~~~vGD~~~Di~  186 (233)
T 3umb_A          111 LREMGLPLGILSNGN---PQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPA-AQILFVSSNGWDAC  186 (233)
T ss_dssp             HHTTTCCEEEEESSC---HHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCG-GGEEEEESCHHHHH
T ss_pred             HHhCCCcEEEEeCCC---HHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCc-ccEEEEeCCHHHHH
Confidence            678899999999954   455666788899875445666553         23444445555543 456777743 4456


Q ss_pred             HHHHcCCeeeC
Q 025117           72 ELELAGFQYLG   82 (257)
Q Consensus        72 ~l~~~g~~~~~   82 (257)
                      .++.+|+....
T Consensus       187 ~a~~~G~~~~~  197 (233)
T 3umb_A          187 GATWHGFTTFW  197 (233)
T ss_dssp             HHHHHTCEEEE
T ss_pred             HHHHcCCEEEE
Confidence            67888987753

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=88.54  E-value=1.4  Score=33.10  Aligned_cols=73  Identities=15%  Similarity=0.160  Sum_probs=46.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceech---------HHHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts---------~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|+++.++||++.    .....++.+|+.-.-+.++++         .......+++.+..   .++++| +....+
T Consensus        94 l~~~g~~~~i~t~~~~----~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~---~~~~iGD~~~Di~  166 (190)
T 2fi1_A           94 ISNQGGRHFLVSHRND----QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS---SGLVIGDRPIDIE  166 (190)
T ss_dssp             HHHTTCEEEEECSSCT----HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS---SEEEEESSHHHHH
T ss_pred             HHHCCCcEEEEECCcH----HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC---eEEEEcCCHHHHH
Confidence            5778999999999642    355667788875333445543         23445555555543   677777 445566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      .++.+|+...
T Consensus       167 ~a~~aG~~~~  176 (190)
T 2fi1_A          167 AGQAAGLDTH  176 (190)
T ss_dssp             HHHHTTCEEE
T ss_pred             HHHHcCCeEE
Confidence            6788887654

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=88.54  E-value=2.3  Score=31.97  Aligned_cols=79  Identities=16%  Similarity=0.128  Sum_probs=45.9

Q ss_pred             hhccCCcEEEEeCCCCc-----CH-------HHHHHHHHhCC--CCC-------CCCceec---hHHHHHHHHHhcCCCC
Q 025117            2 LRSKGKRLVFVTNNSTK-----SR-------KQYGKKFETLG--LTV-------TEEEIFA---SSFAAAAYLKSIDFPK   57 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~-----~~-------~~~~~~L~~~G--~~~-------~~~~i~t---s~~~~~~~l~~~~~~~   57 (257)
                      |+++|+++.++||++..     +.       +.+...|+.+|  |+.       ..+++-.   ........+++.+..+
T Consensus        39 L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~  118 (179)
T 3l8h_A           39 LTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDL  118 (179)
T ss_dssp             HHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCC
T ss_pred             HHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCH
Confidence            78899999999998752     22       44566778889  441       0111110   1122334444455543


Q ss_pred             CCEEEEEc-CHHHHHHHHHcCCeee
Q 025117           58 DKKVYVVG-EDGILKELELAGFQYL   81 (257)
Q Consensus        58 ~~~v~vlg-~~~~~~~l~~~g~~~~   81 (257)
                       ..++++| +....+..+.+|+..+
T Consensus       119 -~~~~~vGD~~~Di~~a~~aG~~~i  142 (179)
T 3l8h_A          119 -AGVPAVGDSLRDLQAAAQAGCAPW  142 (179)
T ss_dssp             -TTCEEEESSHHHHHHHHHHTCEEE
T ss_pred             -HHEEEECCCHHHHHHHHHCCCcEE
Confidence             4466676 4455666788887654

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=88.52  E-value=1  Score=34.33  Aligned_cols=75  Identities=16%  Similarity=0.244  Sum_probs=48.0

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcC-HHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGE-DGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~-~~~~~~l~~~g~~~   80 (257)
                      |+++|+++.++||++..   .....++.+|++ --...-.-.......+++.+.. ...++++|- ......++.+|+.+
T Consensus        51 L~~~g~~~~i~T~~~~~---~~~~~~~~lgi~-~~~~~~~k~~~l~~~~~~~~~~-~~~~~~vGD~~nD~~~~~~ag~~v  125 (176)
T 3mmz_A           51 LRKSGLTMLILSTEQNP---VVAARARKLKIP-VLHGIDRKDLALKQWCEEQGIA-PERVLYVGNDVNDLPCFALVGWPV  125 (176)
T ss_dssp             HHHTTCEEEEEESSCCH---HHHHHHHHHTCC-EEESCSCHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHCCCeEEEEECcChH---HHHHHHHHcCCe-eEeCCCChHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCeE
Confidence            78899999999996543   344555667876 1111223445556666665553 345777774 45677888888776


Q ss_pred             e
Q 025117           81 L   81 (257)
Q Consensus        81 ~   81 (257)
                      .
T Consensus       126 ~  126 (176)
T 3mmz_A          126 A  126 (176)
T ss_dssp             E
T ss_pred             E
Confidence            5

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=88.17  E-value=2  Score=32.95  Aligned_cols=76  Identities=21%  Similarity=0.227  Sum_probs=49.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCC--CceechH--------HHHHHHHHhcCCCCCCEEEEEc-CHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTE--EEIFASS--------FAAAAYLKSIDFPKDKKVYVVG-EDGIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~--~~i~ts~--------~~~~~~l~~~~~~~~~~v~vlg-~~~~~   70 (257)
                      |++.|+++.++||++   .......|+.+|+.---  +.|+++.        ......+++.+..+ ..++++| +....
T Consensus        82 l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~-~~~i~iGD~~~Di  157 (205)
T 3m9l_A           82 LAGRGYRLGILTRNA---RELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSP-SRMVMVGDYRFDL  157 (205)
T ss_dssp             HHHTTCEEEEECSSC---HHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCG-GGEEEEESSHHHH
T ss_pred             HHhcCCeEEEEeCCc---hHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCH-HHEEEECCCHHHH
Confidence            678899999999954   45566677888885322  4555432        24555566666543 4577777 44566


Q ss_pred             HHHHHcCCeee
Q 025117           71 KELELAGFQYL   81 (257)
Q Consensus        71 ~~l~~~g~~~~   81 (257)
                      +.++.+|+..+
T Consensus       158 ~~a~~aG~~~i  168 (205)
T 3m9l_A          158 DCGRAAGTRTV  168 (205)
T ss_dssp             HHHHHHTCEEE
T ss_pred             HHHHHcCCEEE
Confidence            77788898554

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=87.63  E-value=2.1  Score=33.33  Aligned_cols=75  Identities=11%  Similarity=0.157  Sum_probs=47.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|.++.++||++.     ....|+.+|+.---+.++++..         .....+++.+..+ ..++++| +....+
T Consensus       104 l~~~g~~~~i~t~~~~-----~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~-~~~i~vGDs~~Di~  177 (233)
T 3nas_A          104 LKNENIKIGLASSSRN-----APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSP-ADCAAIEDAEAGIS  177 (233)
T ss_dssp             HHHTTCEEEECCSCTT-----HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCG-GGEEEEECSHHHHH
T ss_pred             HHHCCCcEEEEcCchh-----HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCH-HHEEEEeCCHHHHH
Confidence            6788999999999632     4566788888644444554322         2333444445533 4567777 445667


Q ss_pred             HHHHcCCeeeC
Q 025117           72 ELELAGFQYLG   82 (257)
Q Consensus        72 ~l~~~g~~~~~   82 (257)
                      .++.+|+..+.
T Consensus       178 ~a~~aG~~~~~  188 (233)
T 3nas_A          178 AIKSAGMFAVG  188 (233)
T ss_dssp             HHHHTTCEEEE
T ss_pred             HHHHcCCEEEE
Confidence            77889987764

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=87.10  E-value=2.9  Score=32.24  Aligned_cols=76  Identities=16%  Similarity=0.204  Sum_probs=48.2

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|+++.++||++   ++.....++.+|+.---+.+++|..         .....+++.+..+ ..++++| +....+
T Consensus        96 L~~~g~~~~i~tn~~---~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p-~e~l~VgDs~~Di~  171 (216)
T 3kbb_A           96 VKSKRIKLALATSTP---QREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVP-EKVVVFEDSKSGVE  171 (216)
T ss_dssp             HHHTTCEEEEECSSC---HHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCG-GGEEEEECSHHHHH
T ss_pred             HHHcCCCcccccCCc---HHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCc-cceEEEecCHHHHH
Confidence            678999999999954   4556667788888644455555432         2333344555544 4566677 445556


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+..+
T Consensus       172 aA~~aG~~~i  181 (216)
T 3kbb_A          172 AAKSAGIERI  181 (216)
T ss_dssp             HHHHTTCCCE
T ss_pred             HHHHcCCcEE
Confidence            6678887653

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=86.71  E-value=4.1  Score=31.42  Aligned_cols=80  Identities=13%  Similarity=0.120  Sum_probs=52.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEcCH--HHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVGED--GIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg~~--~~~   70 (257)
                      |++.|+++.++||+...+.......++.+|+.---+.++++..         .....+++.+.. ...++++|-.  ...
T Consensus       111 l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~nDi  189 (235)
T 2om6_A          111 VKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVK-PEESLHIGDTYAEDY  189 (235)
T ss_dssp             HHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCC-GGGEEEEESCTTTTH
T ss_pred             HHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCC-ccceEEECCChHHHH
Confidence            6778999999999662225555667788888744456665532         234445555553 3567888854  357


Q ss_pred             HHHHHcCCeeeC
Q 025117           71 KELELAGFQYLG   82 (257)
Q Consensus        71 ~~l~~~g~~~~~   82 (257)
                      +.++.+|+....
T Consensus       190 ~~a~~aG~~~~~  201 (235)
T 2om6_A          190 QGARKVGMWAVW  201 (235)
T ss_dssp             HHHHHTTSEEEE
T ss_pred             HHHHHCCCEEEE
Confidence            778889988653

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=86.64  E-value=3.3  Score=31.70  Aligned_cols=77  Identities=5%  Similarity=0.000  Sum_probs=49.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceech---------HHHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts---------~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|+++.++||+.   .......++.+|+.-.-+.++++         .......+++.+..+ ..++++| +....+
T Consensus       106 l~~~g~~~~i~t~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~-~~~i~iGD~~nDi~  181 (226)
T 1te2_A          106 CKEQGLLVGLASASP---LHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDP-LTCVALEDSVNGMI  181 (226)
T ss_dssp             HHHTTCEEEEEESSC---HHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCG-GGEEEEESSHHHHH
T ss_pred             HHHCCCcEEEEeCCc---HHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCCH-HHeEEEeCCHHHHH
Confidence            567899999999964   34455567778876433444432         344555555555533 4677788 455677


Q ss_pred             HHHHcCCeeeC
Q 025117           72 ELELAGFQYLG   82 (257)
Q Consensus        72 ~l~~~g~~~~~   82 (257)
                      .++.+|+....
T Consensus       182 ~a~~aG~~~~~  192 (226)
T 1te2_A          182 ASKAARMRSIV  192 (226)
T ss_dssp             HHHHTTCEEEE
T ss_pred             HHHHcCCEEEE
Confidence            78889987653

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=86.55  E-value=2.5  Score=33.25  Aligned_cols=76  Identities=18%  Similarity=0.203  Sum_probs=49.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEcCH--HHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVGED--GIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg~~--~~~   70 (257)
                      |++.|+++.++||++   .......|..+|+.---+.++++.         ......+++.+..+ ..++++|-.  ...
T Consensus       106 l~~~g~~~~i~t~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~-~~~i~iGD~~~~Di  181 (241)
T 2hoq_A          106 LKELGYELGIITDGN---PVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKP-EEALMVGDRLYSDI  181 (241)
T ss_dssp             HHHHTCEEEEEECSC---HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCG-GGEEEEESCTTTTH
T ss_pred             HHHCCCEEEEEECCC---chhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCc-ccEEEECCCchHhH
Confidence            677899999999943   444556778889864445566543         22344445555533 467788854  356


Q ss_pred             HHHHHcCCeee
Q 025117           71 KELELAGFQYL   81 (257)
Q Consensus        71 ~~l~~~g~~~~   81 (257)
                      +.++.+|+..+
T Consensus       182 ~~a~~aG~~~~  192 (241)
T 2hoq_A          182 YGAKRVGMKTV  192 (241)
T ss_dssp             HHHHHTTCEEE
T ss_pred             HHHHHCCCEEE
Confidence            77888998765

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=86.48  E-value=2.5  Score=33.03  Aligned_cols=76  Identities=21%  Similarity=0.201  Sum_probs=47.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|+++.++||+.   .......|+.+|+.---+.++++.         ......+++.+..+ ..++++| +....+
T Consensus       116 l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~-~~~i~vGD~~~Di~  191 (237)
T 4ex6_A          116 LSAAGFRLAMATSKV---EKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPP-ERCVVIGDGVPDAE  191 (237)
T ss_dssp             HHHTTEEEEEECSSC---HHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCG-GGEEEEESSHHHHH
T ss_pred             HHhCCCcEEEEcCCC---hHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCH-HHeEEEcCCHHHHH
Confidence            677899999999954   344555666777753334444432         34445555555533 4577777 445667


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      .++.+|+..+
T Consensus       192 ~a~~aG~~~i  201 (237)
T 4ex6_A          192 MGRAAGMTVI  201 (237)
T ss_dssp             HHHHTTCEEE
T ss_pred             HHHHCCCeEE
Confidence            7788898654

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=86.30  E-value=2.2  Score=34.19  Aligned_cols=59  Identities=15%  Similarity=0.125  Sum_probs=42.6

Q ss_pred             cHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHc--CCeEEEEccCCCChhhhcCCCCCCCCcEEECC---hhhHHHH
Q 025117          178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG--GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK---ISDFLSL  252 (257)
Q Consensus       178 ~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~a--G~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~---l~el~~~  252 (257)
                      +-...+.+++.++     ++.|||+ .+|+.+=+.+  | .++.+..+.            ..+++++.+   -..+.++
T Consensus       161 Kg~al~~l~~~~g-----via~GD~-~ND~~Ml~~a~~g-~~vam~Na~------------~~A~~v~~~~~~~~gV~~~  221 (239)
T 1u02_A          161 KGSAIRSVRGERP-----AIIAGDD-ATDEAAFEANDDA-LTIKVGEGE------------THAKFHVADYIEMRKILKF  221 (239)
T ss_dssp             HHHHHHHHHTTSC-----EEEEESS-HHHHHHHHTTTTS-EEEEESSSC------------CCCSEEESSHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCC-----eEEEeCC-CccHHHHHHhhCC-cEEEECCCC------------CcceEEeCCCCCHHHHHHH
Confidence            3456677777777     9999999 7999999988  7 566676551            357888888   4555555


Q ss_pred             HHh
Q 025117          253 KAA  255 (257)
Q Consensus       253 l~~  255 (257)
                      |+.
T Consensus       222 l~~  224 (239)
T 1u02_A          222 IEM  224 (239)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=86.16  E-value=1.2  Score=35.27  Aligned_cols=77  Identities=16%  Similarity=0.133  Sum_probs=49.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEc-CHHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVG-EDGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~~~   80 (257)
                      |+++|+++.++||++.   ......++++|+.---..+-.-.......+++.+.. ...+.++| +......++.+|+.+
T Consensus        88 L~~~G~~l~I~T~~~~---~~~~~~l~~lgi~~~f~~~k~K~~~l~~~~~~lg~~-~~~~~~vGDs~nDi~~~~~ag~~~  163 (211)
T 3ij5_A           88 LITSDIDVAIITGRRA---KLLEDRANTLGITHLYQGQSDKLVAYHELLATLQCQ-PEQVAYIGDDLIDWPVMAQVGLSV  163 (211)
T ss_dssp             HHHTTCEEEEECSSCC---HHHHHHHHHHTCCEEECSCSSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHTTSSEEE
T ss_pred             HHHCCCEEEEEeCCCH---HHHHHHHHHcCCchhhcccCChHHHHHHHHHHcCcC-cceEEEEcCCHHHHHHHHHCCCEE
Confidence            7889999999999654   344555667788632222333344555666666653 34567777 445677788888876


Q ss_pred             eC
Q 025117           81 LG   82 (257)
Q Consensus        81 ~~   82 (257)
                      ..
T Consensus       164 a~  165 (211)
T 3ij5_A          164 AV  165 (211)
T ss_dssp             EC
T ss_pred             Ee
Confidence            53

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=85.81  E-value=2.3  Score=33.59  Aligned_cols=75  Identities=17%  Similarity=0.220  Sum_probs=48.0

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|+++.++||++   ++.....|+++|+. .-+.|+++.         ......+++.+..+ ..++++| +....+
T Consensus       122 l~~~g~~~~i~t~~~---~~~~~~~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~-~~~~~vGDs~~Di~  196 (240)
T 2hi0_A          122 LRQKGVKLAVVSNKP---NEAVQVLVEELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVPR-DKCVYIGDSEIDIQ  196 (240)
T ss_dssp             HHHTTCEEEEEEEEE---HHHHHHHHHHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCG-GGEEEEESSHHHHH
T ss_pred             HHHCCCEEEEEeCCC---HHHHHHHHHHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCH-HHeEEEcCCHHHHH
Confidence            678899999999953   34556667788876 445555442         22334444455533 4577777 445566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+..+
T Consensus       197 ~a~~aG~~~v  206 (240)
T 2hi0_A          197 TARNSEMDEI  206 (240)
T ss_dssp             HHHHTTCEEE
T ss_pred             HHHHCCCeEE
Confidence            6788898654

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=85.81  E-value=5.1  Score=31.84  Aligned_cols=107  Identities=9%  Similarity=0.026  Sum_probs=62.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|+++.++||+. + .   ...|+.+|+.---+.|+++..         ....-+++.+..+ ..+.++| +....+
T Consensus       107 L~~~g~~i~i~t~~~-~-~---~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p-~e~l~VgDs~~di~  180 (243)
T 4g9b_A          107 LRAQQISVGLASVSL-N-A---PTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPP-QACIGIEDAQAGID  180 (243)
T ss_dssp             HHHTTCEEEECCCCT-T-H---HHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCG-GGEEEEESSHHHHH
T ss_pred             hhcccccceeccccc-c-h---hhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCCCh-HHEEEEcCCHHHHH
Confidence            678899999999843 2 2   345788888654455655433         2233344455544 3456666 455666


Q ss_pred             HHHHcCCeeeCCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHc
Q 025117           72 ELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRE  130 (257)
Q Consensus        72 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~  130 (257)
                      ..+.+|+..+.....               ....+. ++.....+.++.+...+..+.+
T Consensus       181 aA~~aG~~~I~V~~g---------------~~~ad~-~~~~~~~l~~~~l~~~~~~l~~  223 (243)
T 4g9b_A          181 AINASGMRSVGIGAG---------------LTGAQL-LLPSTESLTWPRLSAFWQNVAE  223 (243)
T ss_dssp             HHHHHTCEEEEESTT---------------CCSCSE-EESSGGGCCHHHHHHHHHHHSC
T ss_pred             HHHHcCCEEEEECCC---------------CCcHHH-hcCChhhcCHHHHHHHHHHHHH
Confidence            778889887643211               111222 2333345788888888777764

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=85.73  E-value=2.6  Score=32.59  Aligned_cols=75  Identities=17%  Similarity=0.156  Sum_probs=47.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH-------HHHHHHHHhcCCCCCCEEEEEc-CHHHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS-------FAAAAYLKSIDFPKDKKVYVVG-EDGILKEL   73 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~-------~~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l   73 (257)
                      |++ |+++.++||++   ++.....|+++|+.---+.|+++.       ......+++.+..+ ..++++| +....+..
T Consensus        96 L~~-~~~l~i~T~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p-~~~~~vgDs~~Di~~a  170 (210)
T 2ah5_A           96 LSS-SYPLYITTTKD---TSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAP-EQAIIIGDTKFDMLGA  170 (210)
T ss_dssp             HHT-TSCEEEEEEEE---HHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCG-GGEEEEESSHHHHHHH
T ss_pred             HHc-CCeEEEEeCCC---HHHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCc-ccEEEECCCHHHHHHH
Confidence            567 99999999943   444566788899874445566542       23344445555543 4567777 34455667


Q ss_pred             HHcCCeee
Q 025117           74 ELAGFQYL   81 (257)
Q Consensus        74 ~~~g~~~~   81 (257)
                      +.+|+..+
T Consensus       171 ~~aG~~~i  178 (210)
T 2ah5_A          171 RETGIQKL  178 (210)
T ss_dssp             HHHTCEEE
T ss_pred             HHCCCcEE
Confidence            78888654

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=85.64  E-value=1.4  Score=35.80  Aligned_cols=76  Identities=12%  Similarity=0.090  Sum_probs=43.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHh---CCCCCCCCceech---H----HHHHHHHHhcCCCCCCEEEEEcC-HHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFET---LGLTVTEEEIFAS---S----FAAAAYLKSIDFPKDKKVYVVGE-DGIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~---~G~~~~~~~i~ts---~----~~~~~~l~~~~~~~~~~v~vlg~-~~~~   70 (257)
                      |+++|+++.++||++..   .....|+.   .|+.---+.|+++   +    ......+++.+..+ ..++++|- ....
T Consensus       142 L~~~g~~~~i~Tn~~~~---~~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p~~~~~~~~~lg~~p-~~~l~VgDs~~di  217 (261)
T 1yns_A          142 WREAGMKVYIYSSGSVE---AQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCST-NNILFLTDVTREA  217 (261)
T ss_dssp             HHHTTCEEEEECSSCHH---HHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCG-GGEEEEESCHHHH
T ss_pred             HHhCCCeEEEEeCCCHH---HHHHHHHhhcccChHhhccEEEecCCCCCCCHHHHHHHHHHhCcCc-ccEEEEcCCHHHH
Confidence            67889999999996533   33344553   4565333556654   1    12233334445533 45677774 4445


Q ss_pred             HHHHHcCCeee
Q 025117           71 KELELAGFQYL   81 (257)
Q Consensus        71 ~~l~~~g~~~~   81 (257)
                      ...+.+|+..+
T Consensus       218 ~aA~~aG~~~i  228 (261)
T 1yns_A          218 SAAEEADVHVA  228 (261)
T ss_dssp             HHHHHTTCEEE
T ss_pred             HHHHHCCCEEE
Confidence            56677888765

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=84.78  E-value=1.8  Score=32.96  Aligned_cols=73  Identities=16%  Similarity=0.217  Sum_probs=45.8

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHH--hCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEc-CHHHHHHHHHcCC
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFE--TLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVG-EDGILKELELAGF   78 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~--~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l~~~g~   78 (257)
                      |+++|+++.++||+  ...+   ..++  .+|++. ....-.-......++++.+..+ ..+.++| +......++..|+
T Consensus        48 Lk~~Gi~~~I~Tg~--~~~~---~~l~~l~lgi~~-~~g~~~K~~~l~~~~~~~gi~~-~~~~~vGD~~nDi~~~~~ag~  120 (168)
T 3ewi_A           48 LKKSGIEVRLISER--ACSK---QTLSALKLDCKT-EVSVSDKLATVDEWRKEMGLCW-KEVAYLGNEVSDEECLKRVGL  120 (168)
T ss_dssp             HHHTTCEEEEECSS--CCCH---HHHHTTCCCCCE-ECSCSCHHHHHHHHHHHTTCCG-GGEEEECCSGGGHHHHHHSSE
T ss_pred             HHHCCCEEEEEeCc--HHHH---HHHHHhCCCcEE-EECCCChHHHHHHHHHHcCcCh-HHEEEEeCCHhHHHHHHHCCC
Confidence            78899999999997  3333   3345  566641 0111123455666666666543 4577777 4466777888898


Q ss_pred             eee
Q 025117           79 QYL   81 (257)
Q Consensus        79 ~~~   81 (257)
                      .+.
T Consensus       121 ~~a  123 (168)
T 3ewi_A          121 SAV  123 (168)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            765

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=84.77  E-value=1.1  Score=37.07  Aligned_cols=78  Identities=9%  Similarity=0.081  Sum_probs=45.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHh--------CCCCCCCCceechHH--------HHHHHHHhcCCCCCCEEEEEc
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFET--------LGLTVTEEEIFASSF--------AAAAYLKSIDFPKDKKVYVVG   65 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~--------~G~~~~~~~i~ts~~--------~~~~~l~~~~~~~~~~v~vlg   65 (257)
                      |+++|+++.++||.+....+...+.|..        +|+.  -+.+++...        .....+++...++...++++|
T Consensus       200 L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~~vg  277 (301)
T 1ltq_A          200 YALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP--LVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAID  277 (301)
T ss_dssp             HHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC--CSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEE
T ss_pred             HHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC--chheeeccCCCCcHHHHHHHHHHHHHhccccceEEEeC
Confidence            6789999999999876665555555666        7883  334443211        122222333222223346677


Q ss_pred             -CHHHHHHHHHcCCeee
Q 025117           66 -EDGILKELELAGFQYL   81 (257)
Q Consensus        66 -~~~~~~~l~~~g~~~~   81 (257)
                       +....+..+.+|+..+
T Consensus       278 D~~~di~~a~~aG~~~~  294 (301)
T 1ltq_A          278 DRTQVVEMWRRIGVECW  294 (301)
T ss_dssp             CCHHHHHHHHHTTCCEE
T ss_pred             CcHHHHHHHHHcCCeEE
Confidence             4556677788898765

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=84.54  E-value=4.6  Score=31.27  Aligned_cols=76  Identities=14%  Similarity=0.123  Sum_probs=51.0

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceech---------HHHHHHHHHhcCCCCCCEEEEEcCH--HHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKKVYVVGED--GIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts---------~~~~~~~l~~~~~~~~~~v~vlg~~--~~~   70 (257)
                      |+ .|+++.++||+.   .......|+.+|+.---+.++++         .......+++.+.. ...++++|-.  ...
T Consensus       119 l~-~g~~~~i~sn~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di  193 (240)
T 3qnm_A          119 LA-PQYNLYILSNGF---RELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSE-LRESLMIGDSWEADI  193 (240)
T ss_dssp             HT-TTSEEEEEECSC---HHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCC-GGGEEEEESCTTTTH
T ss_pred             HH-cCCeEEEEeCCc---hHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCC-cccEEEECCCchHhH
Confidence            55 789999999953   45556677788886444555544         23455556666654 3567778754  567


Q ss_pred             HHHHHcCCeeeC
Q 025117           71 KELELAGFQYLG   82 (257)
Q Consensus        71 ~~l~~~g~~~~~   82 (257)
                      +.++.+|+....
T Consensus       194 ~~a~~aG~~~~~  205 (240)
T 3qnm_A          194 TGAHGVGMHQAF  205 (240)
T ss_dssp             HHHHHTTCEEEE
T ss_pred             HHHHHcCCeEEE
Confidence            888999987763

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=84.22  E-value=1.2  Score=34.96  Aligned_cols=79  Identities=16%  Similarity=0.107  Sum_probs=50.2

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHH---HhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEcC-HH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKF---ETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVGE-DG   68 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L---~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg~-~~   68 (257)
                      |++. .++.++||++....+.+.+.|   ..+|+.---+.++++..         .....+++.+..+ ..++++|- ..
T Consensus       124 l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~-~~~~~vGD~~~  201 (229)
T 4dcc_A          124 LREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDP-KETFFIDDSEI  201 (229)
T ss_dssp             HTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG-GGEEEECSCHH
T ss_pred             HHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCH-HHeEEECCCHH
Confidence            5666 899999997755555555667   77787543456666542         2334444445533 45677774 45


Q ss_pred             HHHHHHHcCCeeeC
Q 025117           69 ILKELELAGFQYLG   82 (257)
Q Consensus        69 ~~~~l~~~g~~~~~   82 (257)
                      ..+..+.+|+..+.
T Consensus       202 Di~~a~~aG~~~i~  215 (229)
T 4dcc_A          202 NCKVAQELGISTYT  215 (229)
T ss_dssp             HHHHHHHTTCEEEC
T ss_pred             HHHHHHHcCCEEEE
Confidence            56777889988764

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=83.65  E-value=7  Score=29.73  Aligned_cols=76  Identities=12%  Similarity=0.066  Sum_probs=49.4

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|.++.++||++   .......++.+|+.-..+.++++.         ......+++.+..+ ..++++| +....+
T Consensus       101 l~~~g~~~~i~s~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~i~iGD~~nDi~  176 (225)
T 3d6j_A          101 LKKQGIRIGIISTKY---RFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACP-EEVLYIGDSTVDAG  176 (225)
T ss_dssp             HHHHTCEEEEECSSC---HHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCG-GGEEEEESSHHHHH
T ss_pred             HHHCCCeEEEEECCC---HHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCCh-HHeEEEcCCHHHHH
Confidence            567899999999953   455666678888764444555432         33455555656533 4577777 455667


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      .++..|+...
T Consensus       177 ~~~~aG~~~~  186 (225)
T 3d6j_A          177 TAAAAGVSFT  186 (225)
T ss_dssp             HHHHHTCEEE
T ss_pred             HHHHCCCeEE
Confidence            7788898654

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=83.46  E-value=3.5  Score=31.82  Aligned_cols=76  Identities=13%  Similarity=0.133  Sum_probs=49.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceec---------hHHHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFA---------SSFAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~t---------s~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|+++.++||+   ........|+.+|+.---+.+++         ........+++.+..+ ..++++| +....+
T Consensus        98 l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~-~~~i~iGD~~~Di~  173 (226)
T 3mc1_A           98 LKDYGFHLVVATSK---PTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKS-DDAIMIGDREYDVI  173 (226)
T ss_dssp             HHHHTCEEEEEEEE---EHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCG-GGEEEEESSHHHHH
T ss_pred             HHHCCCeEEEEeCC---CHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCc-ccEEEECCCHHHHH
Confidence            67789999999995   44556677888888643344443         3344555555656543 3677787 445566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      .++.+|+..+
T Consensus       174 ~a~~aG~~~i  183 (226)
T 3mc1_A          174 GALKNNLPSI  183 (226)
T ss_dssp             HHHTTTCCEE
T ss_pred             HHHHCCCCEE
Confidence            6788887554

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=83.25  E-value=0.36  Score=37.18  Aligned_cols=77  Identities=14%  Similarity=0.257  Sum_probs=43.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|+++.++||++....+.+.+++  +|+.-.-+.++++..         .....+++.+..+ ..++++| +.....
T Consensus       103 l~~~g~~~~i~t~~~~~~~~~~~~~~--~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~~~~vgD~~~Di~  179 (206)
T 2b0c_A          103 LREQGHRVVVLSNTNRLHTTFWPEEY--PEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSP-SDTVFFDDNADNIE  179 (206)
T ss_dssp             HHHTTCEEEEEECCCCCTTSCCGGGC--HHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG-GGEEEEESCHHHHH
T ss_pred             HHHCCCeEEEEECCChHHHHHHHHhc--cChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCH-HHeEEeCCCHHHHH
Confidence            67789999999998766543322221  333222245665543         2334444445433 4566667 344566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+...
T Consensus       180 ~a~~aG~~~~  189 (206)
T 2b0c_A          180 GANQLGITSI  189 (206)
T ss_dssp             HHHTTTCEEE
T ss_pred             HHHHcCCeEE
Confidence            6677787654

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=83.05  E-value=4.2  Score=32.21  Aligned_cols=76  Identities=18%  Similarity=0.237  Sum_probs=46.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceech---------HHHHHHHHHhcCCCCCCEEEEEcC-HHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKKVYVVGE-DGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts---------~~~~~~~l~~~~~~~~~~v~vlg~-~~~~~   71 (257)
                      |++.|+++.++||++   .......|+.+|+.---+.++++         .......+++.+.. ...++++|- .....
T Consensus       126 l~~~g~~~~i~t~~~---~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~  201 (243)
T 2hsz_A          126 LKAQGYILAVVTNKP---TKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLY-PKQILFVGDSQNDIF  201 (243)
T ss_dssp             HHHTTCEEEEECSSC---HHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCC-GGGEEEEESSHHHHH
T ss_pred             HHHCCCEEEEEECCc---HHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcC-hhhEEEEcCCHHHHH
Confidence            678899999999954   34455667778875222333332         22344455555553 345777774 45566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      .++.+|+..+
T Consensus       202 ~a~~aG~~~i  211 (243)
T 2hsz_A          202 AAHSAGCAVV  211 (243)
T ss_dssp             HHHHHTCEEE
T ss_pred             HHHHCCCeEE
Confidence            6788888754

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=82.21  E-value=2.3  Score=33.83  Aligned_cols=76  Identities=20%  Similarity=0.155  Sum_probs=48.6

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCc-eechH----------HHHHHHHHhcCCCCCCEEEEEcC-HHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEE-IFASS----------FAAAAYLKSIDFPKDKKVYVVGE-DGI   69 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~-i~ts~----------~~~~~~l~~~~~~~~~~v~vlg~-~~~   69 (257)
                      |++.|+++.++||+.   .......|+.+|+.---+. ++++.          ......+++.+..+ ..++++|- ...
T Consensus       122 l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~-~~~i~iGD~~~D  197 (259)
T 4eek_A          122 LRAAGVPFAIGSNSE---RGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILP-ERCVVIEDSVTG  197 (259)
T ss_dssp             HHHHTCCEEEECSSC---HHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCG-GGEEEEESSHHH
T ss_pred             HHHCCCeEEEEeCCC---HHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCH-HHEEEEcCCHHH
Confidence            677899999999954   4556667778887532234 44432          23455556666543 45777774 455


Q ss_pred             HHHHHHcCCeee
Q 025117           70 LKELELAGFQYL   81 (257)
Q Consensus        70 ~~~l~~~g~~~~   81 (257)
                      .+.++.+|+..+
T Consensus       198 i~~a~~aG~~~i  209 (259)
T 4eek_A          198 GAAGLAAGATLW  209 (259)
T ss_dssp             HHHHHHHTCEEE
T ss_pred             HHHHHHCCCEEE
Confidence            667788898754

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=81.91  E-value=5.3  Score=31.20  Aligned_cols=77  Identities=17%  Similarity=0.126  Sum_probs=49.4

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceech---------HHHHHHHHHhcCCCCCCEEEEEcC-HHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKKVYVVGE-DGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts---------~~~~~~~l~~~~~~~~~~v~vlg~-~~~~~   71 (257)
                      |++.|+++.++||+   ........|+.+|+.---+.++++         .......+++.+..+...++++|- ....+
T Consensus       122 l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~  198 (240)
T 3sd7_A          122 LYKNGKILLVATSK---PTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDII  198 (240)
T ss_dssp             HHHTTCEEEEEEEE---EHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHH
T ss_pred             HHHCCCeEEEEeCC---cHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHH
Confidence            67889999999994   455666778888886433444432         334445555556541345677774 45566


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      .++.+|+..+
T Consensus       199 ~a~~aG~~~i  208 (240)
T 3sd7_A          199 GAKKIGIDSI  208 (240)
T ss_dssp             HHHHHTCEEE
T ss_pred             HHHHCCCCEE
Confidence            6788887654

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=81.86  E-value=8  Score=33.62  Aligned_cols=41  Identities=29%  Similarity=0.213  Sum_probs=29.8

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCC--ceechHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEE--EIFASSFA   45 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~--~i~ts~~~   45 (257)
                      |+++|+++.++||++   +......|+++|+.---+  .|+++...
T Consensus       227 Lk~~Gi~laIvTn~~---~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv  269 (384)
T 1qyi_A          227 LKGAGFELGIATGRP---YTETVVPFENLGLLPYFEADFIATASDV  269 (384)
T ss_dssp             HHHTTCEEEEECSSC---HHHHHHHHHHHTCGGGSCGGGEECHHHH
T ss_pred             HHhCCCEEEEEeCCc---HHHHHHHHHHcCChHhcCCCEEEecccc
Confidence            678899999999953   455666788889863333  68876553

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=81.81  E-value=1.1  Score=42.73  Aligned_cols=109  Identities=12%  Similarity=0.089  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHcCCCc-eEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEE
Q 025117          120 KVQYGTLCIRENPGC-LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM  198 (257)
Q Consensus       120 ~~~~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~  198 (257)
                      +..++++.|++ .|+ ..++|...... .             ..+....|.+. .+..-.|+--..+++.++-..+.++|
T Consensus       558 ~~~~aI~~L~~-~Gi~v~mlTGd~~~~-a-------------~~ia~~lgi~~-v~a~~~P~~K~~~v~~l~~~g~~V~~  621 (736)
T 3rfu_A          558 STPETILELQQ-SGIEIVMLTGDSKRT-A-------------EAVAGTLGIKK-VVAEIMPEDKSRIVSELKDKGLIVAM  621 (736)
T ss_dssp             SHHHHHHHHHH-HTCEEEEECSSCHHH-H-------------HHHHHHHTCCC-EECSCCHHHHHHHHHHHHHHSCCEEE
T ss_pred             hHHHHHHHHHH-CCCeEEEECCCCHHH-H-------------HHHHHHcCCCE-EEEecCHHHHHHHHHHHHhcCCEEEE
Confidence            45677888876 455 45556543321 1             11212222221 12233444444555555545678999


Q ss_pred             EcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEE--CChhhHHHHHH
Q 025117          199 VGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKA  254 (257)
Q Consensus       199 IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~--~~l~el~~~l~  254 (257)
                      |||. ..|+.+-+.||+ +|.+.+|  +....      ..+|+++  +++..+.+.+.
T Consensus       622 vGDG-~ND~paL~~Adv-GIAmg~g--~d~a~------~~AD~vl~~~~~~~i~~ai~  669 (736)
T 3rfu_A          622 AGDG-VNDAPALAKADI-GIAMGTG--TDVAI------ESAGVTLLHGDLRGIAKARR  669 (736)
T ss_dssp             EECS-STTHHHHHHSSE-EEEESSS--CSHHH------HHCSEEECSCCSTTHHHHHH
T ss_pred             EECC-hHhHHHHHhCCE-EEEeCCc--cHHHH------HhCCEEEccCCHHHHHHHHH
Confidence            9999 699999999994 3444443  22222      2578887  57777766554

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=81.43  E-value=6.3  Score=31.22  Aligned_cols=72  Identities=13%  Similarity=0.087  Sum_probs=45.9

Q ss_pred             CCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEcC-HHHHHHHHH
Q 025117            6 GKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVGE-DGILKELEL   75 (257)
Q Consensus         6 g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg~-~~~~~~l~~   75 (257)
                      |+++.++||++   .......|+.+|+.---+.++++..         .....+++.+..+ ..++++|- ....+.++.
T Consensus       107 g~~~~i~t~~~---~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~~~~vGD~~~Di~~a~~  182 (253)
T 1qq5_A          107 PLKRAILSNGA---PDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTP-AEVLFVSSNGFDVGGAKN  182 (253)
T ss_dssp             TSEEEEEESSC---HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCG-GGEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEeCcC---HHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCH-HHEEEEeCChhhHHHHHH
Confidence            89999999954   4455666788898644456665432         3444445555533 45667773 344666788


Q ss_pred             cCCeee
Q 025117           76 AGFQYL   81 (257)
Q Consensus        76 ~g~~~~   81 (257)
                      +|+...
T Consensus       183 aG~~~~  188 (253)
T 1qq5_A          183 FGFSVA  188 (253)
T ss_dssp             HTCEEE
T ss_pred             CCCEEE
Confidence            888765

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=80.93  E-value=4.7  Score=31.44  Aligned_cols=75  Identities=15%  Similarity=0.088  Sum_probs=45.1

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCC--CceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTE--EEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGI   69 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~--~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~   69 (257)
                      |++.|+++.++||+....   +...|.. |+.---  +.++++.         ......+++.+..+ ..++++| +...
T Consensus       120 l~~~g~~~~i~t~~~~~~---~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~-~~~i~vGD~~~D  194 (247)
T 3dv9_A          120 IKSEGLTPMVVTGSGQTS---LLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKP-NEALVIENAPLG  194 (247)
T ss_dssp             HHHTTCEEEEECSCC------CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCG-GGEEEEECSHHH
T ss_pred             HHHcCCcEEEEcCCchHH---HHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCCh-hheEEEeCCHHH
Confidence            678899999999966443   3344555 665322  4455443         23445555555533 4567777 4456


Q ss_pred             HHHHHHcCCeee
Q 025117           70 LKELELAGFQYL   81 (257)
Q Consensus        70 ~~~l~~~g~~~~   81 (257)
                      .+.++.+|+..+
T Consensus       195 i~~a~~aG~~~i  206 (247)
T 3dv9_A          195 VQAGVAAGIFTI  206 (247)
T ss_dssp             HHHHHHTTSEEE
T ss_pred             HHHHHHCCCeEE
Confidence            677788897654

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=80.51  E-value=9.8  Score=28.72  Aligned_cols=74  Identities=19%  Similarity=0.206  Sum_probs=47.4

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceech---------HHHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts---------~~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++. +++.++||++   .......|+.+|+.---+.++++         .......+++.+ +  ..++++| +....+
T Consensus        85 l~~~-~~~~i~t~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~-~--~~~~~vGD~~~Di~  157 (201)
T 2w43_A           85 ISEI-AEVYALSNGS---INEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG-A--KEAFLVSSNAFDVI  157 (201)
T ss_dssp             HHHH-SEEEEEESSC---HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT-C--SCCEEEESCHHHHH
T ss_pred             HHhC-CeEEEEeCcC---HHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC-C--CcEEEEeCCHHHhH
Confidence            5667 8999999954   45566678888986434556654         223344445544 2  4567777 445566


Q ss_pred             HHHHcCCeeeC
Q 025117           72 ELELAGFQYLG   82 (257)
Q Consensus        72 ~l~~~g~~~~~   82 (257)
                      ..+.+|+....
T Consensus       158 ~a~~aG~~~~~  168 (201)
T 2w43_A          158 GAKNAGMRSIF  168 (201)
T ss_dssp             HHHHTTCEEEE
T ss_pred             HHHHCCCEEEE
Confidence            77889987653

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=80.18  E-value=1.3  Score=36.04  Aligned_cols=31  Identities=13%  Similarity=-0.050  Sum_probs=28.8

Q ss_pred             hCCCCCcEEEEcC----ChhhHHHHHHHcCCeEEEE
Q 025117          189 FGIQKSQICMVGD----RLDTDILFGQNGGCKTLLV  220 (257)
Q Consensus       189 ~~~~~~~~~~IGD----~~~~Di~~A~~aG~~ti~V  220 (257)
                      +|+++++++.|||    + ..|+.+-+.+|..++.|
T Consensus       206 ~gi~~~~viafGDs~~~~-~NDi~Ml~~~~~~g~av  240 (262)
T 2fue_A          206 DQDSFDTIHFFGNETSPG-GNDFEIFADPRTVGHSV  240 (262)
T ss_dssp             TTSCCSEEEEEESCCSTT-STTHHHHHSTTSEEEEC
T ss_pred             HCCCHHHEEEECCCCCCC-CCCHHHHhcCccCcEEe
Confidence            7999999999999    8 69999999999888877

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	257
d1wvia_	253	c.108.1.14 (A:) Putative phosphatase SMU.1415c {St	1e-37
d1vjra_	261	c.108.1.14 (A:) Hypothetical protein TM1742 {Therm	2e-37
d1yv9a1	253	c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En	2e-34
d2c4na1	250	c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId	1e-31
d2o2xa1	209	c.108.1.19 (A:8-216) Hypothetical protein Mll2559	3e-06
d2fpwa1	161	c.108.1.19 (A:3-163) Histidine biosynthesis bifunc	1e-05
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	9e-05
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	5e-04
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	5e-04
d1x42a1	230	c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A	8e-04
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	8e-04
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	0.002
d2gfha1	247	c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas	0.004

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

 Score =  130 bits (327), Expect = 1e-37
 Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 28/250 (11%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASSFAAAAYLKSIDFPKDK 59
            L+ +    + VTNN+T++ +   +   T        E I+ ++ A   Y+  +   + K
Sbjct: 29  RLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPLETIYTATLATIDYMNDM--KRGK 86

Query: 60  KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY 119
             YV+GE G+ K +  AG+                     E  ++   VVVG D    Y 
Sbjct: 87  TAYVIGETGLKKAVAEAGY--------------------REDSENPAYVVVGLDTNLTYE 126

Query: 120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPST 179
           K+   TL I++    +FI TN D     T+     G G+++     +T+ +P+++GKP  
Sbjct: 127 KLTLATLAIQKG--AVFIGTNPDL-NIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEA 183

Query: 180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP 239
            +M+   ++ G+++ +  MVGD   TDI  G      TLLV +G T    +  P   IQP
Sbjct: 184 VIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEV--PALPIQP 241

Query: 240 DFYTNKISDF 249
           DF  + ++++
Sbjct: 242 DFVLSSLAEW 251

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} Length = 261

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

 Score =  130 bits (326), Expect = 2e-37
 Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 26/252 (10%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKK 60
            L+ K KR VF TNNS+   + Y +K   +G+ V ++ +  S    A ++         +
Sbjct: 34  TLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITAEHML--KRFGRCR 91

Query: 61  VYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 120
           ++++G   + K  E  G                     +  +++   VV+GFD+   Y +
Sbjct: 92  IFLLGTPQLKKVFEAYGH--------------------VIDEENPDFVVLGFDKTLTYER 131

Query: 121 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 180
           ++   + +    G  +IAT+ D      +      G  M      + ++  L+ GKP+  
Sbjct: 132 LKKACILL--RKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPL 189

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
           ++D ++ KFG+ K ++ MVGDRL TD+  G+N G  ++LVL+G T+   L+      +PD
Sbjct: 190 VVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLE--RAETKPD 247

Query: 241 FYTNKISDFLSL 252
           F    + +    
Sbjct: 248 FVFKNLGELAKA 259

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

 Score =  122 bits (307), Expect = 2e-34
 Identities = 71/250 (28%), Positives = 112/250 (44%), Gaps = 28/250 (11%)

Query: 1   MLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEEEIFASSFAAAAYLKSIDFPKDK 59
            L+ K    +FVTNN+TKS +   ++      + V    ++ ++ A   Y+K     + K
Sbjct: 29  RLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLATIDYMKEA--NRGK 86

Query: 60  KVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY 119
           KV+V+GE G++  +  AGF++                     + +   VVVG D   +Y 
Sbjct: 87  KVFVIGEAGLIDLILEAGFEW--------------------DETNPDYVVVGLDTELSYE 126

Query: 120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPST 179
           KV   TL I    G LFI TN D             G  +      +TQ +P+ +GKP  
Sbjct: 127 KVVLATLAI--QKGALFIGTNPDKNIPTERGLLPGAGSVVTFVET-ATQTKPVYIGKPKA 183

Query: 180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP 239
            +M+      G++K Q+ MVGD  +TDI  G   G  +LLV SG T  S +  P     P
Sbjct: 184 IIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAV--PTLPTPP 241

Query: 240 DFYTNKISDF 249
            +  + + ++
Sbjct: 242 TYVVDSLDEW 251

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

 Score =  115 bits (287), Expect = 1e-31
 Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 31/247 (12%)

Query: 2   LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKV 61
           +  KG  LV +TN  +++ +    +F T G+ V +   + S+ A A +L+     + KK 
Sbjct: 31  IMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLR---RQEGKKA 87

Query: 62  YVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKV 121
           YVVGE  ++ EL  AGF                       D +   V+VG  R +N+  +
Sbjct: 88  YVVGEGALIHELYKAGFTI--------------------TDVNPDFVIVGETRSYNWDMM 127

Query: 122 QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFM 181
                 +    G  FIATN            +   G++       + R+P  VGKPS ++
Sbjct: 128 HKAAYFV--ANGARFIATN----PDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWI 181

Query: 182 MDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDF 241
           +    NK      +  +VGD L TDIL G   G +T+LVLSGV+SL  +   +   +P +
Sbjct: 182 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDID--SMPFRPSW 239

Query: 242 YTNKISD 248
               +++
Sbjct: 240 IYPSVAE 246

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

 Score = 44.6 bits (104), Expect = 3e-06
 Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNN 235
           KP+  M+     +  +   +  +VGD+L  D+  G+  G     ++ G  ++     P  
Sbjct: 129 KPNPGMLVEAGKRLALDLQRSLIVGDKL-ADMQAGKRAGLAQGWLVDGEAAV----QPGF 183

Query: 236 SIQPDFYTNKISDFLS 251
           +I+P   ++++ D L+
Sbjct: 184 AIRPLRDSSELGDLLA 199

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

 Score = 42.2 bits (98), Expect = 1e-05
 Identities = 16/106 (15%), Positives = 29/106 (27%), Gaps = 1/106 (0%)

Query: 115 YFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVV 174
               YK+   T            A        +       G              +    
Sbjct: 43  QKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDC 102

Query: 175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 220
            KP   +++    +  + ++   ++GDR  TDI   +N G   L  
Sbjct: 103 RKPKVKLVERYLAEQAMDRANSYVIGDRA-TDIQLAENMGINGLRY 147

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (92), Expect = 9e-05
 Identities = 26/210 (12%), Positives = 64/210 (30%), Gaps = 19/210 (9%)

Query: 33  TVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIE 92
            +    I     A     +++  P+D  +     +      E    Q + G     + + 
Sbjct: 10  VLALPSIAG---AFRRSEEALALPRDFLLGAYQTEF----PEGPTEQLMKGKITFSQWVP 62

Query: 93  LKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCI-----------RENPGCLFIATNR 141
           L      +  K  GA +         +        I           ++      I TN 
Sbjct: 63  LMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCIVTNN 122

Query: 142 DAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGD 201
                            +   F    +   + + KP   + ++L +    + +++  + D
Sbjct: 123 WLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVFLDD 182

Query: 202 RLDTDILFGQNGGCKTLLVLSGVTSLSMLQ 231
              +++   ++ G  T+LV +  ++L  L+
Sbjct: 183 F-GSNLKPARDMGMVTILVHNTASALRELE 211

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 37.8 bits (86), Expect = 5e-04
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML 230
            M YL  K+ I  S   ++GDR   DI  GQ  G  T L  S V    +L
Sbjct: 139 SMLYLREKYQI--SSGLVIGDRP-IDIEAGQAAGLDTHLFTSIVNLRQVL 185

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 38.2 bits (87), Expect = 5e-04
 Identities = 8/45 (17%), Positives = 15/45 (33%), Gaps = 1/45 (2%)

Query: 176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 220
           KP       +    G+  +++  V      D+   +N G     V
Sbjct: 147 KPHPDSYALVEEVLGVTPAEVLFVSSN-GFDVGGAKNFGFSVARV 190

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 37.5 bits (85), Expect = 8e-04
 Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 6/73 (8%)

Query: 180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP 239
            + +    K G++  +   VGD    D    +N G  ++L+          +      + 
Sbjct: 159 RIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKG------EKREFWDKC 212

Query: 240 DFYTNKISDFLSL 252
           DF  + + + + +
Sbjct: 213 DFIVSDLREVIKI 225

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 37.9 bits (87), Expect = 8e-04
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 2/68 (2%)

Query: 185 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN 244
                 + K  + +VGD L  D+L  Q  G   +  L+G+               D+  N
Sbjct: 307 NKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATFIGTLTGLKGKDAAGELEAH-HADYVIN 364

Query: 245 KISDFLSL 252
            + +   +
Sbjct: 365 HLGELRGV 372

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 36.3 bits (82), Expect = 0.002
 Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 13/72 (18%)

Query: 181 MMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD 240
              YL +K+ +       +GDR   D+ F QN G +++  L              + + +
Sbjct: 142 AATYLLDKYQLNSDNTYYIGDRT-LDVEFAQNSGIQSINFLES------------TYEGN 188

Query: 241 FYTNKISDFLSL 252
                ++D   +
Sbjct: 189 HRIQALADISRI 200

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.6 bits (80), Expect = 0.004
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP 239
            +  +  +  G+Q     MVGD L+TDI  G N G K  + ++            +S  P
Sbjct: 168 SIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGR----VPLTSSPMP 223

Query: 240 DFYTNKISDFLSL 252
            +  + + +  +L
Sbjct: 224 HYMVSSVLELPAL 236

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	257
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	100.0
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	100.0
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	100.0
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	100.0
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.77
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.74
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.74
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.74
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.74
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.73
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.73
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.71
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.71
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.71
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.67
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.65
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.63
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.61
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.56
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.55
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.52
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.5
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.5
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.45
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.44
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.43
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.38
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.37
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.73
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.54
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	98.36
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	97.87
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	97.47
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.37
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	96.79
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	96.31
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	95.9
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	95.79
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	95.29
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	95.27
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	95.03
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	94.79
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	94.68
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	93.63
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	92.75
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	92.58
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	91.63
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	91.37
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	91.12
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	91.09
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	90.71
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	90.26
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	88.99
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	88.9
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	88.78
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	87.83
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	87.54
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	85.11
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	85.07
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	84.19
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	82.72
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	80.84

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=100.00  E-value=6e-38  Score=262.62  Aligned_cols=221  Identities=29%  Similarity=0.518  Sum_probs=193.0

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHh-CCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~-~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~   80 (257)
                      |++.|++++|+||||+++++.+.++|.. +|++...++|+||..+++.|++...  ..+++++++..++.+.+.+.+...
T Consensus        30 l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~~~~~~~~~  107 (253)
T d1wvia_          30 LQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPLETIYTATLATIDYMNDMK--RGKTAYVIGETGLKKAVAEAGYRE  107 (253)
T ss_dssp             HHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCCGGGEEEHHHHHHHHHHHHC--CCSEEEEESCHHHHHHHHHTTCEE
T ss_pred             HHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCccccccccccHHHHHHHHHHHhc--cCceeeeccchHHHHHHHHcCCcc
Confidence            7889999999999999999999999975 8999999999999999999998753  457899999999999999988765


Q ss_pred             eCCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH
Q 025117           81 LGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV  160 (257)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~  160 (257)
                      .                    .+.+.+++.+.+..++|.+...+...++  .+.++|+||++..++.. .....+.|.+.
T Consensus       108 ~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~tn~~~~~~~~-~~~~~~~~~~~  164 (253)
T d1wvia_         108 D--------------------SENPAYVVVGLDTNLTYEKLTLATLAIQ--KGAVFIGTNPDLNIPTE-RGLLPGAGAIL  164 (253)
T ss_dssp             C--------------------SSSCSEEEECCCTTCBHHHHHHHHHHHH--TTCEEEESCCCSEEEET-TEEEECHHHHH
T ss_pred             c--------------------ccccceEEEecCCCcCHHHHHHHhhhhh--hccccccCCCCceeEcC-CcccccCCcch
Confidence            3                    3456788999998899988777665554  46789999999987654 33567778889


Q ss_pred             HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCc
Q 025117          161 GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD  240 (257)
Q Consensus       161 ~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd  240 (257)
                      ..+...++.++..+|||+|.+|+.+++++|++|++|+||||++.+||++|+++||+||||++|.++.+++..  ....||
T Consensus       165 ~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~--~~~~PD  242 (253)
T d1wvia_         165 FLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPA--LPIQPD  242 (253)
T ss_dssp             HHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGG--CSSCCS
T ss_pred             hcccccccceeEEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhh--cCCCCC
Confidence            999999999999999999999999999999999999999999888999999999999999999988877653  346899


Q ss_pred             EEECChhhH
Q 025117          241 FYTNKISDF  249 (257)
Q Consensus       241 ~~~~~l~el  249 (257)
                      |+++|+.||
T Consensus       243 ~vi~sl~e~  251 (253)
T d1wvia_         243 FVLSSLAEW  251 (253)
T ss_dssp             EEESCGGGC
T ss_pred             EEECCHHHc
Confidence            999999986

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.2e-37  Score=258.21  Aligned_cols=226  Identities=30%  Similarity=0.528  Sum_probs=195.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCeee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL   81 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~~   81 (257)
                      |+++|++++|+|||+++++.++.+++..+|+++.+++|+||+..+..++.+..  ...+++++|...++.++.+.+....
T Consensus        35 l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~~~~v~ts~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  112 (261)
T d1vjra_          35 LKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITAEHMLKRF--GRCRIFLLGTPQLKKVFEAYGHVID  112 (261)
T ss_dssp             HHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHHHHH--CSCEEEEESCHHHHHHHHHTTCEEC
T ss_pred             HHHcCCCEEEEeCCCCCCHHHHHHHHHhhccccccceeccHHHHHHHHHHHhc--CCceEEEecccchhHHHHhcCcccc
Confidence            78899999999999999999999999999999999999999999999997642  3478999999999999999887653


Q ss_pred             CCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHH
Q 025117           82 GGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG  161 (257)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~  161 (257)
                                          .++...++++.++.+.|.....++...+  .+..++++|+|..++.. .....+.|.+..
T Consensus       113 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~d~~~~~~-~~~~~~~~~~~~  169 (261)
T d1vjra_         113 --------------------EENPDFVVLGFDKTLTYERLKKACILLR--KGKFYIATHPDINCPSK-EGPVPDAGSIMA  169 (261)
T ss_dssp             --------------------SSSCSEEEECCCTTCCHHHHHHHHHHHT--TTCEEEESCCCSEECCT-TSCEECHHHHHH
T ss_pred             --------------------hhhcceeEecCCcccchHHHHHHHHHhh--cCcceecccCCccccCC-CCcccccchhhH
Confidence                                3445688889999999988777766554  46788999999987654 335667788888


Q ss_pred             HHHhccCCCc-cccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCc
Q 025117          162 AFVGSTQREP-LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD  240 (257)
Q Consensus       162 ~i~~~~~~~~-~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd  240 (257)
                      .+....+..+ ...+||+|.+|+.+++++|++|++++||||++.+||.+|+++||+||||+||..+.+++..  .+..||
T Consensus       170 ~~~~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~--~~~~PD  247 (261)
T d1vjra_         170 AIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLER--AETKPD  247 (261)
T ss_dssp             HHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHH--CSSCCS
T ss_pred             HHhhhcccccccccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhh--cCCCCC
Confidence            8888777764 5678999999999999999999999999999889999999999999999999998887653  346899


Q ss_pred             EEECChhhHHHHHH
Q 025117          241 FYTNKISDFLSLKA  254 (257)
Q Consensus       241 ~~~~~l~el~~~l~  254 (257)
                      |+++++.||.++|+
T Consensus       248 ~ii~~l~eL~~~l~  261 (261)
T d1vjra_         248 FVFKNLGELAKAVQ  261 (261)
T ss_dssp             EEESSHHHHHHHHC
T ss_pred             EEECCHHHHHHHhC
Confidence            99999999999874

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.3e-36  Score=251.52  Aligned_cols=218  Identities=32%  Similarity=0.536  Sum_probs=187.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCeee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYL   81 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~~   81 (257)
                      |+++|++++|+|||++++++++.++|+++|++++.++|+|+...+..++++.   +++++|++|...+.+++........
T Consensus        31 l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  107 (250)
T d2c4na1          31 IMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQ---EGKKAYVVGEGALIHELYKAGFTIT  107 (250)
T ss_dssp             HHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCGGGEEEHHHHHHHHHHTS---SCCEEEEECCTHHHHHHHHTTCEEC
T ss_pred             HHHCCCcEEEEeCCCCCCHHHHHHHHhhccccccceeEechHHHHHHHHHhh---hcccccccCCHHHHHHHHHhhhhcc
Confidence            6789999999999999999999999999999999999999999999999865   3478999999999999988765543


Q ss_pred             CCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHH
Q 025117           82 GGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG  161 (257)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~  161 (257)
                                          +......+.+....++|.....+...++.  ...++++|++....    ....+.|.+..
T Consensus       108 --------------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~g~~~~  161 (250)
T d2c4na1         108 --------------------DVNPDFVIVGETRSYNWDMMHKAAYFVAN--GARFIATNPDTHGR----GFYPACGALCA  161 (250)
T ss_dssp             --------------------SSSCSEEEECCCTTCCHHHHHHHHHHHHT--TCEEEESCCCSBSS----TTCBCHHHHHH
T ss_pred             --------------------ccccceeeccCCcccchHHHHHHHHHHhc--cccccccccccccC----ceeecCcchHH
Confidence                                23455677788888899888888777663  56788999987432    24566688888


Q ss_pred             HHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcE
Q 025117          162 AFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDF  241 (257)
Q Consensus       162 ~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~  241 (257)
                      .+....+.+....+||+|.+|+.+++++|++|++|+||||++.+||++|+++||+||||.||.++.+++..  ...+|||
T Consensus       162 ~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~--~~~~pd~  239 (250)
T d2c4na1         162 GIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDS--MPFRPSW  239 (250)
T ss_dssp             HHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSS--CSSCCSE
T ss_pred             HHHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHh--CCCCCCE
Confidence            88888888888899999999999999999999999999999888999999999999999999998888764  4468999


Q ss_pred             EECChhhHH
Q 025117          242 YTNKISDFL  250 (257)
Q Consensus       242 ~~~~l~el~  250 (257)
                      +++++.||.
T Consensus       240 i~~sl~eL~  248 (250)
T d2c4na1         240 IYPSVAEID  248 (250)
T ss_dssp             EESSGGGCC
T ss_pred             EECCHHHhC
Confidence            999999974

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=100.00  E-value=1.5e-35  Score=247.71  Aligned_cols=221  Identities=33%  Similarity=0.570  Sum_probs=192.0

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHh-CCCCCCCCceechHHHHHHHHHhcCCCCCCEEEEEcCHHHHHHHHHcCCee
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQY   80 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~-~G~~~~~~~i~ts~~~~~~~l~~~~~~~~~~v~vlg~~~~~~~l~~~g~~~   80 (257)
                      |++.|++++|+||||++++++++++|.. +|+.+..++|+||+.++..|+++..  ...++++++.....+.....+...
T Consensus        30 l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  107 (253)
T d1yv9a1          30 LQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLATIDYMKEAN--RGKKVFVIGEAGLIDLILEAGFEW  107 (253)
T ss_dssp             HHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHHHHHHHHHHC--CCSEEEEESCHHHHHHHHHTTCEE
T ss_pred             HHHCCCCEEEEeCCCCCCHHHHHHHHHHhcCCccccccccCHHHHHHHHHHhcc--CCCeEEecccchhhhhhhhhcccc
Confidence            7889999999999999999999999975 8899999999999999999998754  347899999999888888777655


Q ss_pred             eCCCCCCCCccccCCCcccCCCCCccEEEEeccCCCCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH
Q 025117           81 LGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV  160 (257)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~aVv~~~d~~~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~  160 (257)
                      .                    ...+++++.+.+..++|.++..+...+.  .+..++++|+|...+.. .....+.|.+.
T Consensus       108 ~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~n~d~~~~~~-~~~~~~~~~~~  164 (253)
T d1yv9a1         108 D--------------------ETNPDYVVVGLDTELSYEKVVLATLAIQ--KGALFIGTNPDKNIPTE-RGLLPGAGSVV  164 (253)
T ss_dssp             C--------------------SSSCSEEEECCCTTCCHHHHHHHHHHHH--TTCEEEESCCCSEEEET-TEEEECHHHHH
T ss_pred             c--------------------ccCcceEEEeccCcccHHHhhhhhhhhc--cccceeeecCCcccccc-Cceeeeccccc
Confidence            3                    3457888999999999999887777666  46788999999987654 33567788888


Q ss_pred             HHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCc
Q 025117          161 GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPD  240 (257)
Q Consensus       161 ~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd  240 (257)
                      ..+....+.++..++||+|.+|+++++++|++|++|+||||++.+||++|+++||++|+|.+|.+..+++..  ...+||
T Consensus       165 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~--~~~~Pd  242 (253)
T d1yv9a1         165 TFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPT--LPTPPT  242 (253)
T ss_dssp             HHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTT--CSSCCS
T ss_pred             ccccccccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHh--cCCCCC
Confidence            888888899888999999999999999999999999999999888999999999999999999987766553  446799


Q ss_pred             EEECChhhH
Q 025117          241 FYTNKISDF  249 (257)
Q Consensus       241 ~~~~~l~el  249 (257)
                      |+++|+.|+
T Consensus       243 ~vi~sl~e~  251 (253)
T d1yv9a1         243 YVVDSLDEW  251 (253)
T ss_dssp             EEESSGGGC
T ss_pred             EEECCHHHc
Confidence            999999986

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=1.4e-19  Score=148.74  Aligned_cols=131  Identities=23%  Similarity=0.253  Sum_probs=102.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+++.+++..|++ +..+.|+||.+.... ...+...|+..+|+.+..+..   ...+||+|.+|+.+++++|++|++
T Consensus       109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~-~~~l~~~gl~~~fd~i~~s~~---~~~~KP~p~~~~~~~~~~~~~~~~  183 (247)
T d2gfha1         109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQ-REKIEACACQSYFDAIVIGGE---QKEEKPAPSIFYHCCDLLGVQPGD  183 (247)
T ss_dssp             CCCHHHHHHHHHHHT-TSEEEEEECSCHHHH-HHHHHHHTCGGGCSEEEEGGG---SSSCTTCHHHHHHHHHHHTCCGGG
T ss_pred             ccCccHHHHHHHhhc-ccceEEeecccchhh-hhhhhhccccccccccccccc---cccchhhhhhHHHHHHHhhcCHHh
Confidence            567889999999985 566788999877542 223456677777766655443   345999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      |+||||++.+||.+|+++||+++++.++.......    ....|+|++.++.||.++|++
T Consensus       184 ~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~----~~~~p~~~i~~l~eL~~ll~~  239 (247)
T d2gfha1         184 CVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLT----SSPMPHYMVSSVLELPALLQS  239 (247)
T ss_dssp             EEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSS----CCCCCSEEESSGGGHHHHHHH
T ss_pred             cceeccChHhHHHHHHHcCCeEEEEECCCCCCccc----ccCCCCEEECCHHHHHHHHHH
Confidence            99999998799999999999977765544433222    236899999999999999876

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.74  E-value=2.6e-19  Score=143.48  Aligned_cols=125  Identities=18%  Similarity=0.198  Sum_probs=102.1

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEE
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC  197 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  197 (257)
                      |+.+...+..++. .+.++|+||.+.... ...+...|+..+|+.+....  +   .+||+|.+|..+++++|++|++++
T Consensus        86 ~~~~~~~l~~l~~-~~~~~i~t~~~~~~~-~~~l~~~gl~~~fd~v~~~~--~---~~~~~p~~~~~~~~~~~~~~~~~v  158 (210)
T d2ah5a1          86 FPQIIDLLEELSS-SYPLYITTTKDTSTA-QDMAKNLEIHHFFDGIYGSS--P---EAPHKADVIHQALQTHQLAPEQAI  158 (210)
T ss_dssp             CTTHHHHHHHHHT-TSCEEEEEEEEHHHH-HHHHHHTTCGGGCSEEEEEC--S---SCCSHHHHHHHHHHHTTCCGGGEE
T ss_pred             hhHHHHHHhhhhc-ccchhhcccccchhh-hHHHHhhccccccccccccc--c---cccccccccchhhhhhhcccccce
Confidence            4567778888875 567888899876543 33445667777766554332  2   389999999999999999999999


Q ss_pred             EEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          198 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       198 ~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      ||||+ .+|+.+|+++|+++|+|.+|.+..+++..    ..||++++++.||+++||
T Consensus       159 ~VGDs-~~Di~aa~~aGi~~i~v~~g~~~~~~l~~----~~pd~vi~~l~el~~~le  210 (210)
T d2ah5a1         159 IIGDT-KFDMLGARETGIQKLAITWGFGEQADLLN----YQPDYIAHKPLEVLAYFQ  210 (210)
T ss_dssp             EEESS-HHHHHHHHHHTCEEEEESSSSSCHHHHHT----TCCSEEESSTTHHHHHTC
T ss_pred             eecCC-HHHHHHHHHcCCeEEEEcCCCCCHHHHHh----CCCCEEECCHHHHHHHhC
Confidence            99999 69999999999999999999998888765    679999999999998764

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.74  E-value=3.2e-19  Score=143.71  Aligned_cols=127  Identities=15%  Similarity=0.131  Sum_probs=97.5

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+...+..++..+..++++||.+.... ...+...+...+|+.+..+..   ....||+|++|+.+++++|++|++
T Consensus        93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~-~~~~~~~~~~~~fd~~~~s~~---~~~~KP~p~~~~~~~~~~g~~p~e  168 (220)
T d1zrna_          93 APFSEVPDSLRELKRRGLKLAILSNGSPQSI-DAVVSHAGLRDGFDHLLSVDP---VQVYKPDNRVYELAEQALGLDRSA  168 (220)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHTTCGGGCSEEEESGG---GTCCTTSHHHHHHHHHHHTSCGGG
T ss_pred             cccchhHHHHHHHHhcCCeEEeecchHHHHH-HHHHhhccccccccceeeeee---eeccccHHHHHHHHHHHhCCCCce
Confidence            3455677788888764445788899876443 223344566666665554443   445999999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSL  252 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~  252 (257)
                      |+||||++ .||.+|+++||++|+|.++.....++.     ..||+++++|.||+++
T Consensus       169 ~l~VgD~~-~Di~~A~~aG~~~v~v~r~~~~~~~~~-----~~~d~~i~~l~el~~l  219 (220)
T d1zrna_         169 ILFVASNA-WDATGARYFGFPTCWINRTGNVFEEMG-----QTPDWEVTSLRAVVEL  219 (220)
T ss_dssp             EEEEESCH-HHHHHHHHHTCCEEEECTTCCCCCSSS-----CCCSEEESSHHHHHTT
T ss_pred             EEEEecCh-HhHHHHHHcCCEEEEEcCCCCCccccc-----CCCCEEECCHHHHHhh
Confidence            99999995 899999999999999987655544433     5799999999999875

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.74  E-value=2.7e-19  Score=145.70  Aligned_cols=128  Identities=15%  Similarity=0.109  Sum_probs=100.2

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .|+++.++++.|++ +..++++||.+.... ...+...|+..+|+.+..+.   ....+||+|++|+.+++++|++|++|
T Consensus       101 ~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~-~~~l~~~gl~~~fd~i~~s~---~~~~~KP~~~~~~~~~~~l~~~p~~~  175 (230)
T d1x42a1         101 LYPEVVEVLKSLKG-KYHVGMITDSDTEYL-MAHLDALGIKDLFDSITTSE---EAGFFKPHPRIFELALKKAGVKGEEA  175 (230)
T ss_dssp             BCTTHHHHHHHHBT-TBEEEEEESSCHHHH-HHHHHHHTCGGGCSEEEEHH---HHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred             ccccHHHHHHHhhc-cCceeeeeccccccc-hhhhcccccccccccccccc---cccccchhhHHHHHHHhhhccccccc
Confidence            35677888888864 445668899877543 22345566666666555443   23459999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +||||++.+||++|+++|++++++.++....+..      ..|||+++++.||.++|+.
T Consensus       176 l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~------~~~d~~i~~l~el~~~l~~  228 (230)
T d1x42a1         176 VYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFW------DKCDFIVSDLREVIKIVDE  228 (230)
T ss_dssp             EEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGG------GGSSEEESSTTHHHHHHHH
T ss_pred             ceeecCcHhHHHHHHHcCCEEEEECCCCCCcccc------cCCCEEECCHHHHHHHHHH
Confidence            9999997789999999999999998776554432      3689999999999999876

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.74  E-value=1.7e-19  Score=145.46  Aligned_cols=129  Identities=22%  Similarity=0.323  Sum_probs=103.8

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .|+.+.+.+..|++.+....|+||.+.... ...+...|+..+|+.+..+.   .....||+|.+|..++++++++|+++
T Consensus        96 l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~-~~~l~~~gl~~~f~~~~~~~---~~~~~kp~p~~~~~~~~~~~~~~~~~  171 (224)
T d2hsza1          96 LYPNVKETLEALKAQGYILAVVTNKPTKHV-QPILTAFGIDHLFSEMLGGQ---SLPEIKPHPAPFYYLCGKFGLYPKQI  171 (224)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHHHTTCGGGCSEEECTT---TSSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             hHHHHHHHHHHHhccCCcccccccccHHHH-HHHHHhcCchhhcccccccc---ccccccccchhhHHHHHHhhhhhhcc
Confidence            466788889999875555778899877542 23445667777766554443   34458999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      +||||+ .+||.+|+++|+++|+|.+|..+..++..    ..||++++++.||++++|
T Consensus       172 ~~igD~-~~Di~~A~~aG~~~i~v~~g~~~~~~l~~----~~~d~~v~~l~dL~~iie  224 (224)
T d2hsza1         172 LFVGDS-QNDIFAAHSAGCAVVGLTYGYNYNIPIAQ----SKPDWIFDDFADILKITQ  224 (224)
T ss_dssp             EEEESS-HHHHHHHHHHTCEEEEESSSCSTTCCGGG----GCCSEEESSGGGGGGGTC
T ss_pred             chhcCc-HHHHHHHHHcCCeEEEEeCCCCCcchhhh----cCCCEEECCHHHHHHhhC
Confidence            999999 69999999999999999999887666553    579999999999998764

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.73  E-value=2.9e-19  Score=143.24  Aligned_cols=124  Identities=15%  Similarity=0.017  Sum_probs=99.6

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .|+.+.+.++.|++ +..++|+||...... ...+...++..+|+.+.++..   ...+||+|.+|+.+++++|++|++|
T Consensus        83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~-~~~l~~~~l~~~f~~i~~~~~---~~~~KP~p~~~~~~~~~~~~~~~~~  157 (207)
T d2hdoa1          83 LYPGITSLFEQLPS-ELRLGIVTSQRRNEL-ESGMRSYPFMMRMAVTISADD---TPKRKPDPLPLLTALEKVNVAPQNA  157 (207)
T ss_dssp             ECTTHHHHHHHSCT-TSEEEEECSSCHHHH-HHHHTTSGGGGGEEEEECGGG---SSCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred             cccchhhhhhhhcc-ccccccccccccccc-ccccccccccccccccccccc---cccchhhhhhhcccccceeeeccce
Confidence            45667788888875 566789999876442 334456677766665544433   3459999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHH
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSL  252 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~  252 (257)
                      +||||+ .+||.+|+++||++|+|.||..+.++..      .++++++++.||+++
T Consensus       158 l~VgDs-~~Di~~a~~aG~~~i~v~~g~~~~~~~~------~~~~~i~~l~dll~l  206 (207)
T d2hdoa1         158 LFIGDS-VSDEQTAQAANVDFGLAVWGMDPNADHQ------KVAHRFQKPLDILEL  206 (207)
T ss_dssp             EEEESS-HHHHHHHHHHTCEEEEEGGGCCTTGGGS------CCSEEESSGGGGGGG
T ss_pred             eEecCC-HHHHHHHHHcCCeEEEEecCCCChhHhh------hcCcEeCCHHHHHhh
Confidence            999999 6999999999999999999988877654      589999999999865

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=5.9e-18  Score=133.48  Aligned_cols=132  Identities=15%  Similarity=0.098  Sum_probs=94.1

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCc-ccccCchHHHHHHhccCC--------------------CccccC
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQ-EWAGGGSMVGAFVGSTQR--------------------EPLVVG  175 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~-~~~~~g~~~~~i~~~~~~--------------------~~~~~g  175 (257)
                      .|+.+.+++..|++.+-..+|+||+.......... ....+-.++.......+.                    +...++
T Consensus        28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~r  107 (182)
T d2gmwa1          28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCR  107 (182)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSSS
T ss_pred             ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeeccccccccccccccccccc
Confidence            46778899999988555588899987633110000 011111122222111111                    123457


Q ss_pred             CCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeE-EEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          176 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT-LLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       176 KP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~t-i~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      ||+|.++..++++++++|++++||||+ .+||++|++||+.+ ++|.+|....+...     ..|||+++++.|++++|.
T Consensus       108 KP~p~m~~~~~~~~~i~~~~s~mVGDs-~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~-----~~ad~v~~~l~dl~~~ik  181 (182)
T d2gmwa1         108 KPHPGMLLSARDYLHIDMAASYMVGDK-LEDMQAAVAANVGTKVLVRTGKPITPEAE-----NAADWVLNSLADLPQAIK  181 (182)
T ss_dssp             TTSCHHHHHHHHHHTBCGGGCEEEESS-HHHHHHHHHTTCSEEEEESSSSCCCHHHH-----HHCSEEESCGGGHHHHHH
T ss_pred             CCccccccchhhhcccccccccccCCC-HHHHHHHHHhCCCcEEEECCCCCCCcccc-----cCCCEEECCHHHHHHHhc
Confidence            999999999999999999999999999 59999999999975 78888877665544     369999999999999986

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.71  E-value=2.1e-18  Score=139.99  Aligned_cols=131  Identities=13%  Similarity=0.061  Sum_probs=103.4

Q ss_pred             CHHHHHHHHHHHHcCCCc-eEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHh---CCC
Q 025117          117 NYYKVQYGTLCIRENPGC-LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKF---GIQ  192 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~-~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~---~~~  192 (257)
                      .|+.+.+.++.|++.+++ ..|+||.+.... ...+...|+..+|+.+.++...   ..+||.|.++...+..+   +++
T Consensus        92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~-~~~l~~~gl~~~fd~i~~~~~~---~~~k~~p~~~~~~~~~~~~~~~~  167 (228)
T d2hcfa1          92 LLEGVRELLDALSSRSDVLLGLLTGNFEASG-RHKLKLPGIDHYFPFGAFADDA---LDRNELPHIALERARRMTGANYS  167 (228)
T ss_dssp             ECTTHHHHHHHHHTCTTEEEEEECSSCHHHH-HHHHHTTTCSTTCSCEECTTTC---SSGGGHHHHHHHHHHHHHCCCCC
T ss_pred             ecCchHHHHhhhhccccccccccCCCcchhh-hhhhhhhccccccccccccccc---ccccchhHHHHHHhhhhcccCCC
Confidence            356788889999875445 568899877542 2344667777777766544333   34899999877666555   789


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      |++|+||||++ +||.+|+++||++|+|.||.++.+++..    ..||++++++.||.++|...
T Consensus       168 p~~~l~VGD~~-~Di~aA~~aG~~~i~v~~g~~~~~~l~~----~~ad~vi~~~~el~~~l~~l  226 (228)
T d2hcfa1         168 PSQIVIIGDTE-HDIRCARELDARSIAVATGNFTMEELAR----HKPGTLFKNFAETDEVLASI  226 (228)
T ss_dssp             GGGEEEEESSH-HHHHHHHTTTCEEEEECCSSSCHHHHHT----TCCSEEESCSCCHHHHHHHH
T ss_pred             hhHheeecCCh-HHHHHHHHcCCEEEEEcCCCCCHHHHhh----CCCCEEECCHHHHHHHHHHH
Confidence            99999999995 8999999999999999999999988765    57999999999999998764

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.71  E-value=1.8e-18  Score=142.92  Aligned_cols=134  Identities=17%  Similarity=0.120  Sum_probs=95.6

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHH-HHHHhccCCCccccCCCcHHHHHHHHHHhCCC-CC
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV-GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KS  194 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~-~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-~~  194 (257)
                      .|+.+.+.+..|++.+-.+.|+||.+.... ...+...|+..++ +.+.+..   ....+||+|.+|..+++++++. ++
T Consensus       100 ~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~-~~~l~~~~l~~~f~d~~~~~d---~~~~~KP~p~~~~~~~~~l~~~p~~  175 (257)
T d1swva_         100 PINGVKEVIASLRERGIKIGSTTGYTREMM-DIVAKEAALQGYKPDFLVTPD---DVPAGRPYPWMCYKNAMELGVYPMN  175 (257)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEBCSSCHHHH-HHHHHHHHHTTCCCSCCBCGG---GSSCCTTSSHHHHHHHHHHTCCSGG
T ss_pred             cCCcHHHHHHHHHhcccceeecCCCchhhH-HHHHHHHhhcccccccccccc---cccccccChHHHHHHHHHhCCCCcc
Confidence            567788899999874334678899876442 2233344444433 3333322   2345899999999999999995 58


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCC----hhhhcCC---------------CCCCCCcEEECChhhHHHHHHh
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTS----LSMLQSP---------------NNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~----~~~~~~~---------------~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      +|+||||+ .+||.+|+++||++|+|.||.+.    .++....               -....|||+++++.||.++|+.
T Consensus       176 ~~v~VgDs-~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~eL~~ii~~  254 (257)
T d1swva_         176 HMIKVGDT-VSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEH  254 (257)
T ss_dssp             GEEEEESS-HHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHH
T ss_pred             eEEEEeCC-hhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEECCHHHHHHHHHH
Confidence            99999999 59999999999999999999752    2211100               0013599999999999999875

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.71  E-value=3.5e-18  Score=139.65  Aligned_cols=134  Identities=16%  Similarity=0.069  Sum_probs=96.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+.+..++..++.  ....++||...... ...+...+...+|+.+..+..   ...+||+|++|+.+++++|++|++
T Consensus        93 ~~~~~~~~~L~~l~~--~~~~v~s~~~~~~~-~~~~~~~~~~~~fd~v~~s~~---~~~~KP~p~~f~~a~~~lg~~p~e  166 (245)
T d1qq5a_          93 TPYPDAAQCLAELAP--LKRAILSNGAPDML-QALVANAGLTDSFDAVISVDA---KRVFKPHPDSYALVEEVLGVTPAE  166 (245)
T ss_dssp             CBCTTHHHHHHHHTT--SEEEEEESSCHHHH-HHHHHHTTCGGGCSEEEEGGG---GTCCTTSHHHHHHHHHHHCCCGGG
T ss_pred             ccchhhhHHHHHHhh--hceeEEeccchHHH-HHHHhhccccccccccccccc---ccccCccHHHHHHHHHHhCCChhh
Confidence            445667777777753  45677788776442 223344566666666655443   345899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCCChhh----------------hc--CCCCCCCCcEEECChhhHHHHHHhh
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSM----------------LQ--SPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~----------------~~--~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      |+||||+ .+||.+|+++||+||+|.+.......                +.  .......||++++++.||+++++..
T Consensus       167 ~l~VgD~-~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~  244 (245)
T d1qq5a_         167 VLFVSSN-GFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGM  244 (245)
T ss_dssp             EEEEESC-HHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHH
T ss_pred             EEEEeCC-HHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHHhh
Confidence            9999999 58999999999999999754211100                00  0123458999999999999999864

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=1.1e-17  Score=134.59  Aligned_cols=123  Identities=10%  Similarity=0.041  Sum_probs=96.6

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+.+++..|++.+..+.|+||.+.... ...+...|+..+|+.+.++.   ....+||+|++|+.+++++|++|++|
T Consensus        89 ~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~-~~~l~~~~l~~~F~~i~~~~---~~~~~Kp~~~~~~~~~~~l~~~~~~~  164 (218)
T d1te2a_          89 LLPGVREAVALCKEQGLLVGLASASPLHML-EKVLTMFDLRDSFDALASAE---KLPYSKPHPQVYLDCAAKLGVDPLTC  164 (218)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHTTCGGGCSEEEECT---TSSCCTTSTHHHHHHHHHHTSCGGGE
T ss_pred             ccchHHHHHHHhhhcccccccccccccccc-cccccccccccccccccccc---ccccchhhHHHHHHHHHHcCCCchhc
Confidence            356778889999875555888999876542 23445677777776655443   34459999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhH
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF  249 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el  249 (257)
                      +||||+ .+||.+|+++|+++|+|.++....+...     ..|+++++++.||
T Consensus       165 l~igD~-~~di~aA~~~G~~~i~v~~~~~~~~~~~-----~~a~~~i~~l~el  211 (218)
T d1te2a_         165 VALEDS-VNGMIASKAARMRSIVVPAPEAQNDPRF-----VLANVKLSSLTEL  211 (218)
T ss_dssp             EEEESS-HHHHHHHHHTTCEEEECCCTTTTTCGGG-----GGSSEECSCGGGC
T ss_pred             EEEeeC-HHHHHHHHHcCCEEEEECCCCCccchhh-----cCCCEEECChhhC
Confidence            999999 5999999999999999987755443322     4689999999997

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.65  E-value=1.3e-17  Score=133.01  Aligned_cols=120  Identities=19%  Similarity=0.209  Sum_probs=96.1

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .|+.+.+++..|++++-.++|+||.+...  ...+...|+..+|+.+..   .+....+||+|++|+.++++++++|++|
T Consensus        83 ~~pgv~~~L~~L~~~g~~~~v~Sn~~~~~--~~~l~~~gl~~~f~~i~~---s~~~~~~Kp~~~~~~~~~~~~~~~p~~~  157 (204)
T d2go7a1          83 LMPGAREVLAWADESGIQQFIYTHKGNNA--FTILKDLGVESYFTEILT---SQSGFVRKPSPEAATYLLDKYQLNSDNT  157 (204)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCTHH--HHHHHHHTCGGGEEEEEC---GGGCCCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             ccchHHhhhhcccccccchhhhcccchhh--hhhhhhcccccccccccc---cccccccchhHHHHHHHHHHhCCCCceE
Confidence            45778889999987555578889976632  224456677777665543   3344569999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      +||||+ .+|+.+|+++||++|+|.+|.            ..+++.++++.||.++++
T Consensus       158 l~VgD~-~~Di~~A~~~G~~~i~v~~~~------------~~~~~~~~~~~dl~~l~~  202 (204)
T d2go7a1         158 YYIGDR-TLDVEFAQNSGIQSINFLEST------------YEGNHRIQALADISRIFE  202 (204)
T ss_dssp             EEEESS-HHHHHHHHHHTCEEEESSCCS------------CTTEEECSSTTHHHHHTS
T ss_pred             EEEeCC-HHHHHHHHHcCCeEEEEcCCC------------CCcCeecCCHHHHHHHhc
Confidence            999999 699999999999999998874            357889999999988764

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2.1e-17  Score=134.50  Aligned_cols=125  Identities=11%  Similarity=0.055  Sum_probs=92.6

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      ..|+++.+.+..|++.+-...|+||.+.... .......+.+.+++.+....  +....+||+|.+|..+++++|++|++
T Consensus       127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~-~~~~~~~~~~~~~~~~~~~~--d~~~~~KP~p~~~~~~~~~~~~~p~~  203 (253)
T d1zs9a1         127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQ-KLLFGHSTEGDILELVDGHF--DTKIGHKVESESYRKIADSIGCSTNN  203 (253)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHHTBTTBCCGGGCSEEE--CGGGCCTTCHHHHHHHHHHHTSCGGG
T ss_pred             ccCCCHHHHHHHHhhccCceeecCCCcHHHH-HHHHHHcCcchhhhhcceee--ccccccCCCcHHHHHHHHHhCCCcCc
Confidence            4678888999999874455788999887542 22234455555555433322  23445899999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccC-CCChhhhcCCCCCCCCcEEECChhhH
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSG-VTSLSMLQSPNNSIQPDFYTNKISDF  249 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G-~~~~~~~~~~~~~~~pd~~~~~l~el  249 (257)
                      |+||||+ ..||.+|+++||++|+|.++ .....+..     ..|+++++||.||
T Consensus       204 ~l~vgD~-~~dv~aA~~aG~~ti~v~r~g~~~~~~~~-----~~~~~~i~sl~EL  252 (253)
T d1zs9a1         204 ILFLTDV-TREASAAEEADVHVAVVVRPGNAGLTDDE-----KTYYSLITSFSEL  252 (253)
T ss_dssp             EEEEESC-HHHHHHHHHTTCEEEEECCTTCCCCCHHH-----HHHSCEESSGGGC
T ss_pred             EEEEeCC-HHHHHHHHHcCCEEEEEeCCCCCCCchhh-----cCCCcEECChHHh
Confidence            9999999 58999999999999999764 33232222     3578899999987

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.61  E-value=1.1e-16  Score=129.06  Aligned_cols=130  Identities=14%  Similarity=0.099  Sum_probs=95.6

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEE
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC  197 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  197 (257)
                      ++.+...++.++   ...+|+||...... ...+...++..+|+.+............||+|++|..+++++|++|++|+
T Consensus        87 ~~g~~~~L~~l~---~~~~i~t~~~~~~~-~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~l  162 (222)
T d2fdra1          87 IDGVKFALSRLT---TPRCICSNSSSHRL-DMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVV  162 (222)
T ss_dssp             CTTHHHHHHHCC---SCEEEEESSCHHHH-HHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             hhhHHHHhhhcc---ccceeeeecchhhh-hhhhcccccccccceeecccccccccccccCHHHHHHHHHhhCCCCceEE
Confidence            445556666554   34568888876442 23445667777776544332110112389999999999999999999999


Q ss_pred             EEcCChhhHHHHHHHcCCeEEEEccCCCChh----hhcCCCCCCCCcEEECChhhHHHHHHhh
Q 025117          198 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLS----MLQSPNNSIQPDFYTNKISDFLSLKAAA  256 (257)
Q Consensus       198 ~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~----~~~~~~~~~~pd~~~~~l~el~~~l~~~  256 (257)
                      ||||+ ..|+.+|+++||.+|+|.+|.....    .+..    ..|+++++++.||.++|.++
T Consensus       163 ~vgDs-~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~----~~ad~vi~~l~eL~~ll~~l  220 (222)
T d2fdra1         163 VVEDS-VHGIHGARAAGMRVIGFTGASHTYPSHADRLTD----AGAETVISRMQDLPAVIAAM  220 (222)
T ss_dssp             EEESS-HHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHH----HTCSEEESCGGGHHHHHHHH
T ss_pred             EEcCC-HHHHHHHHHcCCEEEEEccCCCCCcchHHHHHh----CCCCEEECCHHHHHHHHHHh
Confidence            99999 5999999999999999999975432    2222    46999999999999999865

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.56  E-value=2.4e-15  Score=120.78  Aligned_cols=107  Identities=13%  Similarity=0.170  Sum_probs=73.8

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHH---hccC--------------------CCccc
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFV---GSTQ--------------------REPLV  173 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~---~~~~--------------------~~~~~  173 (257)
                      -|+.+.++++.|++.+-.++|+||+....  ...........+...+.   ...|                    .....
T Consensus        49 l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~--~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  126 (209)
T d2o2xa1          49 LRPQMLPAIATANRAGIPVVVVTNQSGIA--RGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHP  126 (209)
T ss_dssp             BCGGGHHHHHHHHHHTCCEEEEEECHHHH--TTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCT
T ss_pred             ecccHHHHHHHHHhhCCeEEEecccccch--hhhhhhhhhhhhhhHHHHHhhhcccccceEEEecccccccccccccccc
Confidence            46788899999987555588999975421  10101100011111110   0001                    01133


Q ss_pred             cCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCC
Q 025117          174 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS  226 (257)
Q Consensus       174 ~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~  226 (257)
                      ++||+|.|+..+++++++++++++||||+ .+||++|++|||++++|.+|...
T Consensus       127 ~rKP~p~ml~~a~~~~~i~~~~~~~VGD~-~~Di~aA~~AGi~~i~v~~g~~~  178 (209)
T d2o2xa1         127 MRKPNPGMLVEAGKRLALDLQRSLIVGDK-LADMQAGKRAGLAQGWLVDGEAA  178 (209)
T ss_dssp             TSTTSCHHHHHHHHHHTCCGGGCEEEESS-HHHHHHHHHTTCSEEEEETCCCE
T ss_pred             cccccchhhhHhHHHhCCCccceEEeCCC-HHHHHHHHHCCCcEEEEeCCCCc
Confidence            46999999999999999999999999999 69999999999999999998753

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.55  E-value=1.9e-16  Score=127.38  Aligned_cols=101  Identities=15%  Similarity=0.043  Sum_probs=77.3

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .++.+...+..|+..+-.++++||.....   ..+...++..+|+.+..+   +....+||+|++|+.+++++|++|++|
T Consensus        92 ~~~g~~~~l~~l~~~~~~i~i~s~~~~~~---~~l~~~~l~~~f~~i~~~---~~~~~~KP~~~~~~~~l~~~~i~~~~~  165 (221)
T d1o08a_          92 VYPGILQLLKDLRSNKIKIALASASKNGP---FLLERMNLTGYFDAIADP---AEVAASKPAPDIFIAAAHAVGVAPSES  165 (221)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCTTHH---HHHHHTTCGGGCSEECCT---TTSSSCTTSTHHHHHHHHHTTCCGGGE
T ss_pred             ccCCceeccccccccccceEEEeecchhh---HHHHhhcccccccccccc---ccccccccChHHHHHHHHHcCCCCceE
Confidence            45677788888887544567778765422   233455666665554433   344569999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      +||||+ ..||++|+++||++|+|.++.
T Consensus       166 l~VgD~-~~di~~A~~aG~~~i~v~~~~  192 (221)
T d1o08a_         166 IGLEDS-QAGIQAIKDSGALPIGVGRPE  192 (221)
T ss_dssp             EEEESS-HHHHHHHHHHTCEEEEESCHH
T ss_pred             EEEecC-HHHHHHHHHcCCEEEEECChh
Confidence            999999 599999999999999998753

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=9.1e-16  Score=122.59  Aligned_cols=113  Identities=17%  Similarity=0.085  Sum_probs=78.6

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCccccc-CchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAG-GGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKS  194 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~-~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~  194 (257)
                      ..++.+.+++..|++..-.+.++||........ ...... ...+.+.+......+....+||+|++|+.+++++|++|+
T Consensus        99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~-~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~  177 (225)
T d1zd3a1          99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAE-RDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPS  177 (225)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTT-HHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             CCCccHHHHHHHHHhccCccccccccchhhHHH-HHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCcc
Confidence            356778888888887444467889976643211 111110 011222222223333455699999999999999999999


Q ss_pred             cEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhh
Q 025117          195 QICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML  230 (257)
Q Consensus       195 ~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~  230 (257)
                      +|+||||+ .+||.+|+++||++|+|.++....+++
T Consensus       178 e~l~VgD~-~~Di~~A~~~G~~ti~v~~~~~~~~~l  212 (225)
T d1zd3a1         178 EVVFLDDI-GANLKPARDLGMVTILVQDTDTALKEL  212 (225)
T ss_dssp             GEEEEESC-HHHHHHHHHTTCEEEECSSHHHHHHHH
T ss_pred             ceeEEecC-HHHHHHHHHcCCEEEEECCcchhHHHH
Confidence            99999999 699999999999999999876554443

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.50  E-value=1.7e-15  Score=121.57  Aligned_cols=112  Identities=13%  Similarity=0.119  Sum_probs=81.9

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCC---cccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCC
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDA---QEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ  192 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~---~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~  192 (257)
                      ..|+.+.+.+..|++......++||..........   ....++..+|+.+..+   +....+||+|++|+.++++++++
T Consensus        97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s---~~~~~~KP~p~~~~~~~~~~~v~  173 (222)
T d1cr6a1          97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIES---CQVGMIKPEPQIYNFLLDTLKAK  173 (222)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEH---HHHSCCTTCHHHHHHHHHHHTSC
T ss_pred             CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeeh---hhccCCCCChHHHHHHHHHhCCC
Confidence            45778889999998754557777886553221100   1123444444444333   33445999999999999999999


Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhc
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQ  231 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~  231 (257)
                      |++|+||||+ .+||.+|+++||++|+|.++....+++.
T Consensus       174 p~~~l~IgD~-~~Di~~A~~aG~~ti~V~~~~~~~~el~  211 (222)
T d1cr6a1         174 PNEVVFLDDF-GSNLKPARDMGMVTILVHNTASALRELE  211 (222)
T ss_dssp             TTSEEEEESS-STTTHHHHHHTCEEEECCSSSHHHHHHH
T ss_pred             cceEEEEECC-HHHHHHHHHcCCEEEEECCcchHHHHHH
Confidence            9999999999 6999999999999999998876665554

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=4.2e-15  Score=115.95  Aligned_cols=102  Identities=15%  Similarity=0.076  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCccc-ccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEW-AGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      ++.....+..++..+....++||........ .+.. .++..+|+.+.   ..+....+||+|++|+.+++++|++|++|
T Consensus        86 ~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~-~~~~~~~l~~~fd~v~---~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~  161 (197)
T d2b0ca1          86 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTF-WPEEYPEIRDAADHIY---LSQDLGMRKPEARIYQHVLQAEGFSPSDT  161 (197)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEECCCCCTTSC-CGGGCHHHHHHCSEEE---EHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             CchhHHHHHHHHhcCCeEEEEeCccHHHHHH-HHHHcccchhhcccee---ecccccccccchHHHHHHHHhcCCCCCeE
Confidence            4455566666666455577888876643222 2222 24444443333   33334568999999999999999999999


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      +||||+ .+||++|+++||+||+|....
T Consensus       162 l~vgDs-~~di~~A~~aG~~ti~v~~~~  188 (197)
T d2b0ca1         162 VFFDDN-ADNIEGANQLGITSILVKDKT  188 (197)
T ss_dssp             EEEESC-HHHHHHHHTTTCEEEECCSTT
T ss_pred             EEEeCC-HHHHHHHHHcCCEEEEECCCC
Confidence            999999 599999999999999997654

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.45  E-value=1.6e-14  Score=111.17  Aligned_cols=109  Identities=18%  Similarity=0.126  Sum_probs=71.5

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHH---HHhccC-------------CCccccCCCcH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGA---FVGSTQ-------------REPLVVGKPST  179 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~---i~~~~~-------------~~~~~~gKP~p  179 (257)
                      ..|+.+.+++..|++.+-..+|+||.+...  ...........+...   +....+             .+.....||+|
T Consensus        30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p  107 (161)
T d2fpwa1          30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLG--TQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKV  107 (161)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEECTTTT--STTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSS
T ss_pred             eECccHHHHHHHHHHcCCceeeecccccch--hHHHHHHHhhhhhhhhhhhccccccccceeeecccccccccccccccc
Confidence            456788899999987544577889987532  111111111211111   111111             11234479999


Q ss_pred             HHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCCh
Q 025117          180 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL  227 (257)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~  227 (257)
                      .++..++++++++|++++||||+ .+||++|++|||++++|.++....
T Consensus       108 ~~~~~~~~~~~id~~~~~~IGD~-~~Di~aA~~aG~~~i~i~~~~~~~  154 (161)
T d2fpwa1         108 KLVERYLAEQAMDRANSYVIGDR-ATDIQLAENMGINGLRYDRETLNW  154 (161)
T ss_dssp             GGGGGGC----CCGGGCEEEESS-HHHHHHHHHHTSEEEECBTTTBCH
T ss_pred             HHHHHHHHhcCCChhcEEEECCC-HHHHHHHHHcCCeEEEECCCCCCH
Confidence            99999999999999999999999 599999999999999998775443

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.44  E-value=1.4e-14  Score=115.96  Aligned_cols=88  Identities=11%  Similarity=0.035  Sum_probs=67.8

Q ss_pred             cccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhh
Q 025117          151 QEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSML  230 (257)
Q Consensus       151 ~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~  230 (257)
                      +...++..+|+.+..+.    ....||+|.+|..+++++|++|++|+||||+ .+||.+|+++||+||+|.+.....   
T Consensus       138 l~~~~l~~~Fd~v~~~~----~~~~KP~p~~f~~~~~~lg~~p~e~l~VgD~-~~Dv~~A~~aG~~ti~v~r~g~~~---  209 (225)
T d2g80a1         138 HDSLDLNSYIDGYFDIN----TSGKKTETQSYANILRDIGAKASEVLFLSDN-PLELDAAAGVGIATGLASRPGNAP---  209 (225)
T ss_dssp             SCCBCCGGGCCEEECHH----HHCCTTCHHHHHHHHHHHTCCGGGEEEEESC-HHHHHHHHTTTCEEEEECCTTSCC---
T ss_pred             HHhcCCccccceeeecc----ccCCCCChhHhHHHHHhcccCchhceeecCC-HHHHHHHHHcCCEEEEEeCCCCCC---
Confidence            44567777776554432    2237999999999999999999999999999 599999999999999997532211   


Q ss_pred             cCCCCCCCCcEEECChhhH
Q 025117          231 QSPNNSIQPDFYTNKISDF  249 (257)
Q Consensus       231 ~~~~~~~~pd~~~~~l~el  249 (257)
                         .....|..++++|.||
T Consensus       210 ---~~~~~~~~~i~~~~eL  225 (225)
T d2g80a1         210 ---VPDGQKYQVYKNFETL  225 (225)
T ss_dssp             ---CCSSCCSCEESCSTTC
T ss_pred             ---CcccCCCCccCChhhC
Confidence               1224677789999875

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=1.2e-14  Score=112.23  Aligned_cols=101  Identities=14%  Similarity=0.078  Sum_probs=75.7

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCc
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      -.|+.+.+++..|++.+-.+.|+||+.........+...+...++.        ......||+|..|..+++++|++|++
T Consensus        46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~kp~~~~~~~~~~~~~~~~~~  117 (164)
T d1u7pa_          46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--------QREIYPGSKVTHFERLHHKTGVPFSQ  117 (164)
T ss_dssp             CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--------EEEESSSCHHHHHHHHHHHHCCCGGG
T ss_pred             ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce--------eeecccCCChHHHHHHHHHhCCChHH
Confidence            3578899999999985445888998765321111122223222211        12334799999999999999999999


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCCC
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGVT  225 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~  225 (257)
                      |+||||+ ..|+++|+++|+.+|+|.+|.+
T Consensus       118 ~l~igD~-~~di~aA~~aG~~~i~v~~G~~  146 (164)
T d1u7pa_         118 MVFFDDE-NRNIIDVGRLGVTCIHIRDGMS  146 (164)
T ss_dssp             EEEEESC-HHHHHHHHTTTCEEEECSSCCC
T ss_pred             EEEEcCC-HHHHHHHHHcCCEEEEECCCCC
Confidence            9999999 6999999999999999999974

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.38  E-value=2.1e-14  Score=112.77  Aligned_cols=103  Identities=28%  Similarity=0.240  Sum_probs=78.6

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcE
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI  196 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  196 (257)
                      .|+.+.+.+..|++.+...+|+||.+... .. .+...++..+|+.+...   +.....||+|++|+.+++++++  ++|
T Consensus        80 ~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~-~l~~~~l~~~fd~i~~~---~~~~~~KP~p~~~~~~~~~~~~--~~~  152 (187)
T d2fi1a1          80 LFEGVSDLLEDISNQGGRHFLVSHRNDQV-LE-ILEKTSIAAYFTEVVTS---SSGFKRKPNPESMLYLREKYQI--SSG  152 (187)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSCTHH-HH-HHHHTTCGGGEEEEECG---GGCCCCTTSCHHHHHHHHHTTC--SSE
T ss_pred             ccchhHHHHHHHHhhhccccccccCccch-hh-hhhhhcccccccccccc---ccccccCCCHHHHHHHHHHcCC--CCe
Confidence            45677888888887555688889987643 22 44566777676655443   3344599999999999999986  569


Q ss_pred             EEEcCChhhHHHHHHHcCCeEEEEccCCCCh
Q 025117          197 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSL  227 (257)
Q Consensus       197 ~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~  227 (257)
                      +||||+ ..|+++|+++|+++++|+++....
T Consensus       153 l~vgDs-~~Di~aA~~aG~~~i~v~~~~~~~  182 (187)
T d2fi1a1         153 LVIGDR-PIDIEAGQAAGLDTHLFTSIVNLR  182 (187)
T ss_dssp             EEEESS-HHHHHHHHHTTCEEEECSCHHHHH
T ss_pred             EEEeCC-HHHHHHHHHcCCEEEEECCCCChH
Confidence            999999 699999999999999998765433

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.37  E-value=2.7e-13  Score=118.20  Aligned_cols=135  Identities=19%  Similarity=0.115  Sum_probs=98.2

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHh----------ccCCCccccCCCcHHHHHHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVG----------STQREPLVVGKPSTFMMDYL  185 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~----------~~~~~~~~~gKP~p~~~~~~  185 (257)
                      .+++.+.+++..|++.+-.+.++||...... ...+...|+..+|+....          .........+||+|.+|..+
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a-~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~  293 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRPYTET-VVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA  293 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHH-HHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHH-HHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence            4788999999999974334778899877542 223344555544422111          11222344699999999998


Q ss_pred             HHHh--------------CCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChh---hhcCCCCCCCCcEEECChhh
Q 025117          186 ANKF--------------GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS---MLQSPNNSIQPDFYTNKISD  248 (257)
Q Consensus       186 ~~~~--------------~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~---~~~~~~~~~~pd~~~~~l~e  248 (257)
                      +..+              +.++++|+||||+ ..|+.+|++||+.+|+|.+|....+   ++.+    ..+|++++++.|
T Consensus       294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~-~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~----~~AD~ii~~~~e  368 (380)
T d1qyia_         294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDS-LADLLSAQKIGATFIGTLTGLKGKDAAGELEA----HHADYVINHLGE  368 (380)
T ss_dssp             HHCCCGGGHHHHHHCCTTCSCTTTEEEEESS-HHHHHHHHHHTCEEEEESCBTTBGGGHHHHHH----TTCSEEESSGGG
T ss_pred             HHHcCCCHHHHHHHHHHhCCCCCeEEEECCC-HHHHHHHHHCCCCEEEEecCCCCcccHHHHHh----CCCCEEECCHHH
Confidence            8654              5678899999999 5999999999999999999987653   3332    479999999999


Q ss_pred             HHHHHHhh
Q 025117          249 FLSLKAAA  256 (257)
Q Consensus       249 l~~~l~~~  256 (257)
                      |.++|...
T Consensus       369 l~~il~~l  376 (380)
T d1qyia_         369 LRGVLDNL  376 (380)
T ss_dssp             HHHHHSCT
T ss_pred             HHHHHHHH
Confidence            99987543

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.73  E-value=5.8e-08  Score=72.14  Aligned_cols=105  Identities=10%  Similarity=-0.061  Sum_probs=68.6

Q ss_pred             CCHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCC-------CccccCCCcHHHHHHHHHH
Q 025117          116 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQR-------EPLVVGKPSTFMMDYLANK  188 (257)
Q Consensus       116 ~~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~-------~~~~~gKP~p~~~~~~~~~  188 (257)
                      ..|+.+.+.++.|++.+..++++||+...+. ......+.  .....+....+.       ....-.+|++.+....+.+
T Consensus        36 ~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~-~~t~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~  112 (149)
T d1ltqa1          36 VINPMVVELSKMYALMGYQIVVVSGRESGTK-EDPTKYYR--MTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWK  112 (149)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECSCCCCS-SSTTHHHH--HHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHhccCeEEEEecCcHHHH-HHHHHHHH--HHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHH
Confidence            3578899999999875555888899877542 21222221  111111111111       0111256777777788877


Q ss_pred             hCCCCCc-EEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          189 FGIQKSQ-ICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       189 ~~~~~~~-~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      +..++.+ ++||||+ .+||++|+++|++++.|.||-
T Consensus       113 ~~~~~~~i~~~igD~-~~dv~a~~~~Gi~~~~V~~Gd  148 (149)
T d1ltqa1         113 HIAPHFDVKLAIDDR-TQVVEMWRRIGVECWQVASGD  148 (149)
T ss_dssp             HTTTTCEEEEEEECC-HHHHHHHHHTTCCEEECSCCC
T ss_pred             hccCCCceEEEEcCC-HHHHHHHHHCCCcEEEeCCCC
Confidence            7766666 5678999 699999999999999999983

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=98.54  E-value=2.9e-09  Score=84.76  Aligned_cols=126  Identities=7%  Similarity=-0.115  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHh-----------ccC--CCccccCCCcHHHHHH
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVG-----------STQ--REPLVVGKPSTFMMDY  184 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~-----------~~~--~~~~~~gKP~p~~~~~  184 (257)
                      ++.+.+.++.|+.++...+|+||...... ...+...+...   .+..           ...  ..+...+||+|.....
T Consensus        77 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~i-~~~l~~l~~~~---~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~  152 (226)
T d2feaa1          77 REGFREFVAFINEHEIPFYVISGGMDFFV-YPLLEGIVEKD---RIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPS  152 (226)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEEEEEEHHHH-HHHHTTTSCGG---GEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHH
T ss_pred             hHHHHHHHHHHHhcccccccCCcchhhhH-HHHHHHcCCcc---ceeeeeEEEeCCcceeccccccccccccCCHHHHHH
Confidence            34566777788764455778888766432 11222222221   1110           000  1223446888899999


Q ss_pred             HHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHHh
Q 025117          185 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA  255 (257)
Q Consensus       185 ~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~~  255 (257)
                      ++++++.++++++||||+ .+|+.+|++||+ .+.+.+  ........    ..|...++++.|+...++.
T Consensus       153 ~~~~~~~~~~~~i~iGDs-~~Dl~~a~~A~~-~~a~~~--~~~~~~~~----~~~~~~~~d~~~i~~~l~~  215 (226)
T d2feaa1         153 VIHELSEPNQYIIMIGDS-VTDVEAAKLSDL-CFARDY--LLNECREQ----NLNHLPYQDFYEIRKEIEN  215 (226)
T ss_dssp             HHHHHCCTTCEEEEEECC-GGGHHHHHTCSE-EEECHH--HHHHHHHT----TCCEECCSSHHHHHHHHHT
T ss_pred             HHHHhcCCCceEEEEeCc-hhhHHHHHHCCE-EEEecc--hHHHHHHc----CCCeeecCCHHHHHHHHHH
Confidence            999999999999999999 699999999996 332222  22221121    3567778999998877653

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=1.3e-07  Score=73.73  Aligned_cols=100  Identities=21%  Similarity=0.095  Sum_probs=66.2

Q ss_pred             CHHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCC--------CccccCCCcHHHHHHHHHH
Q 025117          117 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQR--------EPLVVGKPSTFMMDYLANK  188 (257)
Q Consensus       117 ~~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~--------~~~~~gKP~p~~~~~~~~~  188 (257)
                      -|+.+.+++..|.+.+-.++|+||...... . .......-.....+....+.        ....++||.|-|+..++++
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~r-g-~~s~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~RKP~~GM~~~~~~~  128 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGR-G-KLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQ  128 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHH-T-SSCHHHHHHHHHHHHHHHTSCCEEEEECSSSSSSTTSTHHHHHHHHT
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhcc-C-CcCHHHHHHHHHHHHHHcCCCccEEEecCccccCCCccHHHHHHHHH
Confidence            467788889888764456788899865321 1 11111111112222221111        1245799999999999998


Q ss_pred             hC----CCCCcEEEEcCCh----------------hhHHHHHHHcCCeEE
Q 025117          189 FG----IQKSQICMVGDRL----------------DTDILFGQNGGCKTL  218 (257)
Q Consensus       189 ~~----~~~~~~~~IGD~~----------------~~Di~~A~~aG~~ti  218 (257)
                      ++    ++.++++||||..                .+|+++|+++|++..
T Consensus       129 ~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         129 ANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             SSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             hcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence            75    7889999999941                399999999999953

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.87  E-value=4.9e-06  Score=63.98  Aligned_cols=70  Identities=19%  Similarity=0.306  Sum_probs=55.5

Q ss_pred             ccCCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEEC--ChhhHH
Q 025117          173 VVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN--KISDFL  250 (257)
Q Consensus       173 ~~gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~--~l~el~  250 (257)
                      ..++|.+......++.++++++++++|||+ .+|+.+++.||+. +.+ .   ..+.+.+     .++++++  ++.+++
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs-~nDi~m~~~ag~~-va~-n---a~~~lk~-----~Ad~vi~~~d~~~vl  206 (210)
T d1j97a_         138 LKENAKGEILEKIAKIEGINLEDTVAVGDG-ANDISMFKKAGLK-IAF-C---AKPILKE-----KADICIEKRDLREIL  206 (210)
T ss_dssp             CSTTHHHHHHHHHHHHHTCCGGGEEEEESS-GGGHHHHHHCSEE-EEE-S---CCHHHHT-----TCSEEECSSCGGGGG
T ss_pred             cccccccchhhhHHHHhcccccceEEecCC-cChHHHHHHCCCC-EEE-C---CCHHHHH-----hCCEEEcCCCHHHHH
Confidence            347888899999999999999999999999 6999999999975 444 2   2344543     6899998  567777


Q ss_pred             HHH
Q 025117          251 SLK  253 (257)
Q Consensus       251 ~~l  253 (257)
                      ++|
T Consensus       207 ~~l  209 (210)
T d1j97a_         207 KYI  209 (210)
T ss_dssp             GGC
T ss_pred             HHh
Confidence            654

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=9.8e-06  Score=63.79  Aligned_cols=122  Identities=11%  Similarity=0.033  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchH--H-HHHHhccCCCcc--------ccCCCcHHHHHHHH
Q 025117          118 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSM--V-GAFVGSTQREPL--------VVGKPSTFMMDYLA  186 (257)
Q Consensus       118 ~~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~--~-~~i~~~~~~~~~--------~~gKP~p~~~~~~~  186 (257)
                      ++.+.+.+..|++++-..+|+|+....+. ......+|+...  + ..+.........        .-++......+...
T Consensus        84 ~pg~~~~i~~lk~~G~~~~ivS~~~~~~v-~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~~  162 (217)
T d1nnla_          84 TPGIRELVSRLQERNVQVFLISGGFRSIV-EHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLK  162 (217)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHHHH-HHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCCEEEEECCCchHHH-HHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHHHH
Confidence            46678888899885445677777654331 112223333210  0 000000011111        11222334455544


Q ss_pred             HHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHH
Q 025117          187 NKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL  250 (257)
Q Consensus       187 ~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~  250 (257)
                      ++  .++++|++|||+ .+|+.+++.+|+. +.+.... ..+...     ..+++++.++.||+
T Consensus       163 ~~--~~~~~~~~vGDs-~~Di~~~~~ag~~-va~~~~~-~~~~~~-----~~ad~~i~~f~ell  216 (217)
T d1nnla_         163 EK--FHFKKIIMIGDG-ATDMEACPPADAF-IGFGGNV-IRQQVK-----DNAKWYITDFVELL  216 (217)
T ss_dssp             HH--HCCSCEEEEESS-HHHHTTTTTSSEE-EEECSSC-CCHHHH-----HHCSEEESCGGGGC
T ss_pred             hc--cCccccEEEEeC-HhhHHHHHhCCce-EEECCCH-HHHHHH-----HhCCCEeCCHHHhc
Confidence            44  457899999999 6999999999974 4443221 222222     25899999999874

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.37  E-value=0.00014  Score=56.36  Aligned_cols=62  Identities=19%  Similarity=0.226  Sum_probs=50.5

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECCh
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI  246 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l  246 (257)
                      +.+++..++.++++++++++++++|||+ ..|+.+.+.+|+ ++.|.++  . +.+.     ..+++++++.
T Consensus       150 ~~~K~~al~~l~~~~~i~~~~~~~iGD~-~NDi~ml~~ag~-~vav~na--~-~~~k-----~~A~~v~~~~  211 (230)
T d1wr8a_         150 WINKGSGIEKASEFLGIKPKEVAHVGDG-ENDLDAFKVVGY-KVAVAQA--P-KILK-----ENADYVTKKE  211 (230)
T ss_dssp             TCCHHHHHHHHHHHHTSCGGGEEEEECS-GGGHHHHHHSSE-EEECTTS--C-HHHH-----TTCSEECSSC
T ss_pred             CcCcchhhcccccccccchhheeeeecC-ccHHHHHHHCCe-EEEECCC--C-HHHH-----HhCCEEECCC
Confidence            6778899999999999999999999999 699999999995 5666543  2 3444     3688998764

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.79  E-value=0.00076  Score=52.37  Aligned_cols=68  Identities=13%  Similarity=0.214  Sum_probs=50.8

Q ss_pred             cHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECCh--hhHHHHHHh
Q 025117          178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI--SDFLSLKAA  255 (257)
Q Consensus       178 ~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l--~el~~~l~~  255 (257)
                      .....+.++++++++++++++|||+ .+|+.+.+.+|+ +|.|.++  . +.+.     ..+|+++++-  ..+.+.++.
T Consensus       152 K~~ai~~l~~~~~i~~~~v~~~GDs-~nD~~m~~~a~~-~vav~na--~-~~~k-----~~ad~v~~~~~~~gi~~~l~~  221 (225)
T d1l6ra_         152 KAFAVNKLKEMYSLEYDEILVIGDS-NNDMPMFQLPVR-KACPANA--T-DNIK-----AVSDFVSDYSYGEEIGQIFKH  221 (225)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEEECCS-GGGHHHHTSSSE-EEECTTS--C-HHHH-----HHCSEECSCCTTHHHHHHHHH
T ss_pred             hHHHHHHHhhhhccchhheeeecCC-cchHHHHHHCCe-EEEECCC--c-HHHH-----HhCCEEECCCCcCHHHHHHHH
Confidence            3577888999999999999999999 699999999995 5556443  2 3343     2578888544  556666554

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.31  E-value=0.0012  Score=49.85  Aligned_cols=71  Identities=11%  Similarity=-0.016  Sum_probs=51.4

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEE-ECChhhHHHHH
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFY-TNKISDFLSLK  253 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~-~~~l~el~~~l  253 (257)
                      ..+.+......++.++++++++++|||+ ..|+.+.+.||+.- .+..   . +++.+    ..|+|+ ..+..|+.+.+
T Consensus       127 ~~~~~~~~~~~~~~~~i~~~eviaiGDg-~NDi~Ml~~Ag~gI-Amna---~-~~v~~----~~~~~~~~~~~~d~~~~~  196 (206)
T d1rkua_         127 QLRQKDPKRQSVIAFKSLYYRVIAAGDS-YNDTTMLSEAHAGI-LFHA---P-ENVIR----EFPQFPAVHTYEDLKREF  196 (206)
T ss_dssp             ECCSSSHHHHHHHHHHHTTCEEEEEECS-STTHHHHHHSSEEE-EESC---C-HHHHH----HCTTSCEECSHHHHHHHH
T ss_pred             cccchhhHHHHHHHhcccccceEEecCC-ccCHHHHHhCCccE-EECC---C-HHHHH----hCCCceeecCHHHHHHHH
Confidence            3344455567788899999999999999 79999999999654 3432   2 33332    367885 68899999765


Q ss_pred             Hh
Q 025117          254 AA  255 (257)
Q Consensus       254 ~~  255 (257)
                      ..
T Consensus       197 ~~  198 (206)
T d1rkua_         197 LK  198 (206)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=95.90  E-value=0.014  Score=43.70  Aligned_cols=70  Identities=13%  Similarity=0.108  Sum_probs=54.1

Q ss_pred             CCCcHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECC------hhh
Q 025117          175 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK------ISD  248 (257)
Q Consensus       175 gKP~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~------l~e  248 (257)
                      .++....++..++++++++++++||||+ ..|+.+=+.+|+ ++.+..+   .+.+.     ..++|+..+      +.|
T Consensus        78 ~~~K~~~l~~~~~~~~i~~~~v~~vGDd-~nDl~~l~~~g~-siap~nA---~~~vk-----~~A~~Vt~~~GG~GavrE  147 (177)
T d1k1ea_          78 KLEKETACFDLMKQAGVTAEQTAYIGDD-SVDLPAFAACGT-SFAVADA---PIYVK-----NAVDHVLSTHGGKGAFRE  147 (177)
T ss_dssp             CSCHHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSE-EEECTTS---CHHHH-----TTSSEECSSCTTTTHHHH
T ss_pred             cccHHHHHHHHHHHhcCCcceeEEecCC-ccHHHHHhhCCe-EEEcCCc---cHHHH-----HhCCEEeCCCCCCchHHH
Confidence            5677788899999999999999999999 599999999995 4444433   22333     367888877      777


Q ss_pred             HHHHHH
Q 025117          249 FLSLKA  254 (257)
Q Consensus       249 l~~~l~  254 (257)
                      +.++|-
T Consensus       148 ~~e~il  153 (177)
T d1k1ea_         148 MSDMIL  153 (177)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777764

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=95.79  E-value=0.0067  Score=47.86  Aligned_cols=66  Identities=9%  Similarity=0.148  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHHHH
Q 025117          179 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSLKA  254 (257)
Q Consensus       179 p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~l~  254 (257)
                      -..++.+++++|++++++++|||+ ..|+.+-+.+| .++.|.++.   +++.     ..++|+..+..+  +.+.|+
T Consensus       192 ~~al~~l~~~lgi~~~~vi~~GD~-~ND~~Ml~~ag-~~vam~Na~---~~lk-----~~A~~v~~~~~~~Gva~~i~  259 (269)
T d1rlma_         192 ANGISRLLKRWDLSPQNVVAIGDS-GNDAEMLKMAR-YSFAMGNAA---ENIK-----QIARYATDDNNHEGALNVIQ  259 (269)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHCS-EEEECTTCC---HHHH-----HHCSEECCCGGGTHHHHHHH
T ss_pred             HHHHHHHhhhhccccccEEEEcCC-cchHHHHHhCC-eEEEeCCCC---HHHH-----HhCCEEcCCCCccHHHHHHH
Confidence            456788899999999999999999 69999999998 445565542   3343     257888887554  444443

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=95.29  E-value=0.01  Score=46.99  Aligned_cols=68  Identities=16%  Similarity=0.129  Sum_probs=50.8

Q ss_pred             cHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHHHHh
Q 025117          178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSLKAA  255 (257)
Q Consensus       178 ~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~l~~  255 (257)
                      +-..++.+++.+|+++++++++||+ ..|+.+-+.+| .++.|.++.   +++.     ..+++++++..+  +.+.|+.
T Consensus       214 K~~ai~~l~~~~gi~~~~vi~~GD~-~ND~~Ml~~a~-~svam~na~---~~~k-----~~A~~v~~~~~~~Gv~~~l~~  283 (285)
T d1nrwa_         214 KGQALKRLAKQLNIPLEETAAVGDS-LNDKSMLEAAG-KGVAMGNAR---EDIK-----SIADAVTLTNDEHGVAHMMKH  283 (285)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEEEESS-GGGHHHHHHSS-EEEECTTCC---HHHH-----HHCSEECCCGGGTHHHHHHHH
T ss_pred             hhhHHHHHHhhcccCcccEEEEeCC-HHHHHHHHhCC-eEEEeCCCC---HHHH-----HhCCEEcCCCCccHHHHHHHH
Confidence            3567788899999999999999999 79999999999 666776653   3333     257888876543  4555543

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=95.27  E-value=0.0026  Score=49.05  Aligned_cols=95  Identities=17%  Similarity=0.202  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhc-cCCCcccc--CCCcHHHHHHHHHHhCCCCCc
Q 025117          119 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGS-TQREPLVV--GKPSTFMMDYLANKFGIQKSQ  195 (257)
Q Consensus       119 ~~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~-~~~~~~~~--gKP~p~~~~~~~~~~~~~~~~  195 (257)
                      +...+.++.+++++.-++++||.+.... ......     +...+-.. .....+.+  ++|+..--...++++++    
T Consensus        89 pga~~fl~~~~~~Gv~IfyVTnR~~~~~-e~T~~n-----L~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~y~I----  158 (209)
T d2b82a1          89 EVARQLIDMHVRRGDAIFFVTGRSPTKT-ETVSKT-----LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----  158 (209)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEECSCCCSS-CCHHHH-----HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----
T ss_pred             hhHHHHHHHHHHcCCeEEEEeCCchhhH-HHHHHH-----HHHHcCCCcccccceEeeCCCCCchHHHHHHHHcCe----
Confidence            3455566666664455888899866321 100000     00101000 01111111  22322223344466776    


Q ss_pred             EEEEcCChhhHHHHHHHcCCeEEEEccCC
Q 025117          196 ICMVGDRLDTDILFGQNGGCKTLLVLSGV  224 (257)
Q Consensus       196 ~~~IGD~~~~Di~~A~~aG~~ti~V~~G~  224 (257)
                      ++|+||+ .+|+.+|.++|+++|-|....
T Consensus       159 ~l~~GD~-l~Df~aA~eagi~~iRi~r~~  186 (209)
T d2b82a1         159 RIFYGDS-DNDITAARDVGARGIRILRAS  186 (209)
T ss_dssp             EEEEESS-HHHHHHHHHTTCEEEECCCCT
T ss_pred             EEEecCC-HHHHhHHHHcCCCceEeeccC
Confidence            7899999 599999999999999996543

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=95.03  E-value=0.011  Score=46.64  Aligned_cols=67  Identities=15%  Similarity=0.286  Sum_probs=50.2

Q ss_pred             cHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHHHH
Q 025117          178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSLKA  254 (257)
Q Consensus       178 ~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~l~  254 (257)
                      +....+.+++.++++++++++|||+ ..|+.+-+.+|. ++.+..+.   +++.     ..+++++.+-.+  +..+++
T Consensus       191 K~~ai~~l~~~~~i~~~~vva~GD~-~ND~~ml~~~~~-sva~~na~---~~~k-----~~A~~i~~~~~~~Gva~~i~  259 (267)
T d1nf2a_         191 KGKALRFLRERMNWKKEEIVVFGDN-ENDLFMFEEAGL-RVAMENAI---EKVK-----EASDIVTLTNNDSGVSYVLE  259 (267)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEECS-HHHHHHHTTCSE-EEECTTSC---HHHH-----HHCSEECCCTTTTHHHHHHT
T ss_pred             hhHHHHHHHHhhccCcccEEEEcCC-cchHHHHHhCCc-EEEeCCCC---HHHH-----HhCCEEcCCCCccHHHHHHH
Confidence            3466788999999999999999999 799999999995 56665543   3343     257888876654  455444

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=94.79  E-value=0.025  Score=44.32  Aligned_cols=68  Identities=19%  Similarity=0.239  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHHHHhh
Q 025117          179 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSLKAAA  256 (257)
Q Consensus       179 p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~l~~~  256 (257)
                      -...+.+++.++++++++++|||+ ..|+.+-+.+| .++.+..+   .+++.     ..+++++++..+  +.+.+++.
T Consensus       199 ~~al~~l~~~~~i~~~~ii~~GD~-~ND~~ml~~~~-~~~am~na---~~~lk-----~~a~~i~~~~~~~Gv~~~l~~~  268 (271)
T d1rkqa_         199 GTGVKSLADVLGIKPEEIMAIGDQ-ENDIAMIEYAG-VGVAVDNA---IPSVK-----EVANFVTKSNLEDGVAFAIEKY  268 (271)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSS-EEEECTTS---CHHHH-----HHCSEECCCTTTTHHHHHHHHH
T ss_pred             ccccceehhhcccchhcEEEEeCc-HhHHHHHHhCC-cEEEeCCC---CHHHH-----HhCCEEcCCCCcChHHHHHHHH
Confidence            467889999999999999999999 69999999999 55566543   23443     256888876554  55555543

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=94.68  E-value=0.014  Score=45.77  Aligned_cols=67  Identities=16%  Similarity=0.226  Sum_probs=49.9

Q ss_pred             cHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhh--HHHHHH
Q 025117          178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD--FLSLKA  254 (257)
Q Consensus       178 ~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~e--l~~~l~  254 (257)
                      +....+.+++++|++++++++|||+ ..|+.+-+.+|. ++.|..+.   +++.+     .++|+..+-.+  +.+.|+
T Consensus       187 K~~al~~l~~~~~i~~~~~~a~GD~-~ND~~Ml~~a~~-svav~na~---~~lk~-----~A~~vt~~~~~~Gv~~~l~  255 (260)
T d2rbka1         187 KQKGIDEIIRHFGIKLEETMSFGDG-GNDISMLRHAAI-GVAMGQAK---EDVKA-----AADYVTAPIDEDGISKAMK  255 (260)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEECS-GGGHHHHHHSSE-EEECTTSC---HHHHH-----HSSEECCCGGGTHHHHHHH
T ss_pred             HHHHHHHHHHhccccHhheeEecCC-cccHHHHHhCCe-EEEeCCCC---HHHHH-----hCCEEeCCCCccHHHHHHH
Confidence            4567789999999999999999999 799999999996 67776542   33432     56788776432  444443

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.63  E-value=0.098  Score=39.72  Aligned_cols=63  Identities=17%  Similarity=0.103  Sum_probs=48.9

Q ss_pred             CcHHHHHHHHHHh-CCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHH
Q 025117          177 PSTFMMDYLANKF-GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK  253 (257)
Q Consensus       177 P~p~~~~~~~~~~-~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l  253 (257)
                      -+......+++.+ +.++++++.|||+ ..|+.+=+.+| .++.|..+..            +..-.++++.|+.+++
T Consensus       179 ~K~~al~~l~~~~~~~~~~~~~a~GD~-~ND~~Ml~~a~-~~va~~Na~~------------~~~~~~~~i~~~~~~i  242 (243)
T d1wzca1         179 DKGKAAKILLDFYKRLGQIESYAVGDS-YNDFPMFEVVD-KVFIVGSLKH------------KKAQNVSSIIDVLEVI  242 (243)
T ss_dssp             CHHHHHHHHHHHHHTTSCEEEEEEECS-GGGHHHHTTSS-EEEEESSCCC------------TTCEEESCHHHHHHHH
T ss_pred             ccHHHHHHHHHHhcCCCcccEEEEcCC-HhHHHHHHcCC-cEEEeCCCCh------------HHHhhhhHHHHHHHhh
Confidence            3456667888888 4889999999999 69999999999 7788876532            2334588888888776

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=92.75  E-value=0.045  Score=41.34  Aligned_cols=34  Identities=12%  Similarity=0.127  Sum_probs=29.5

Q ss_pred             HHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEcc
Q 025117          187 NKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS  222 (257)
Q Consensus       187 ~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~  222 (257)
                      ++++++++++++|||+ ..|+.+-+.+|. +|.|..
T Consensus       197 ~~l~i~~~~~iafGD~-~NDl~Ml~~a~~-~vaV~n  230 (232)
T d1xvia_         197 QQLSGKRPTTLGLGDG-PNDAPLLEVMDY-AVIVKG  230 (232)
T ss_dssp             HHHHSSCCEEEEEESS-GGGHHHHHTSSE-EEECCC
T ss_pred             HHcCCChhcEEEEcCC-HhHHHHHHhCCe-EEEEeC
Confidence            4578999999999999 799999999995 777754

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=92.58  E-value=0.067  Score=41.77  Aligned_cols=58  Identities=19%  Similarity=0.260  Sum_probs=44.5

Q ss_pred             cHHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECC
Q 025117          178 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK  245 (257)
Q Consensus       178 ~p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~  245 (257)
                      .......+++.++++++++++|||+ ..|+.+-..+|. ++.+..+.   +++.     ..+++++++
T Consensus       208 K~~~l~~l~~~~~i~~~~vi~~GD~-~ND~~Ml~~a~~-~va~~na~---~~~k-----~~a~~v~~~  265 (283)
T d2b30a1         208 KYTGINYLLKHYNISNDQVLVVGDA-ENDIAMLSNFKY-SFAVANAT---DSAK-----SHAKCVLPV  265 (283)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHHSCSE-EEECTTCC---HHHH-----HHSSEECSS
T ss_pred             hHHHHHHHhhhcccccceEEEecCC-hhhHHHHHhCCc-EEEeCCCC---HHHH-----HhCCEEECC
Confidence            4567888999999999999999999 699999999994 56665442   2333     246787754

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=91.63  E-value=0.11  Score=39.69  Aligned_cols=76  Identities=16%  Similarity=0.243  Sum_probs=50.0

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHh-CCCCCC-CCcee-chH----HHHHHHHHhcCCCCCCEEEEEcC-HHHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVT-EEEIF-ASS----FAAAAYLKSIDFPKDKKVYVVGE-DGILKEL   73 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~-~G~~~~-~~~i~-ts~----~~~~~~l~~~~~~~~~~v~vlg~-~~~~~~l   73 (257)
                      ++++|.+++||||-+...++...+-|++ +|++.. ...++ +..    ..-+.+++++     +-+..+|- .+.....
T Consensus        98 ~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~y-----~I~l~~GD~l~Df~aA  172 (209)
T d2b82a1          98 HVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDK-----NIRIFYGDSDNDITAA  172 (209)
T ss_dssp             HHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHT-----TEEEEEESSHHHHHHH
T ss_pred             HHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHHHHc-----CeEEEecCCHHHHhHH
Confidence            5789999999999887778888888865 999854 44444 321    1245556543     33555663 3444555


Q ss_pred             HHcCCeeeC
Q 025117           74 ELAGFQYLG   82 (257)
Q Consensus        74 ~~~g~~~~~   82 (257)
                      .+.|++.+.
T Consensus       173 ~eagi~~iR  181 (209)
T d2b82a1         173 RDVGARGIR  181 (209)
T ss_dssp             HHTTCEEEE
T ss_pred             HHcCCCceE
Confidence            678877654

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=91.37  E-value=0.068  Score=45.71  Aligned_cols=42  Identities=24%  Similarity=0.386  Sum_probs=35.0

Q ss_pred             HHHHHHHhCCCCCcEEEEcCChhhHHHHHH-HcCCeEEEEccC
Q 025117          182 MDYLANKFGIQKSQICMVGDRLDTDILFGQ-NGGCKTLLVLSG  223 (257)
Q Consensus       182 ~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~-~aG~~ti~V~~G  223 (257)
                      .....+.+|..-.++++|||++..||.-++ ..|++|++|-.-
T Consensus       283 ~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  325 (458)
T d2bdea1         283 AKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  325 (458)
T ss_dssp             HHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred             HHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence            345566678888899999999999999885 579999999754

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=91.12  E-value=0.43  Score=35.35  Aligned_cols=77  Identities=19%  Similarity=0.249  Sum_probs=48.8

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|+++.++||++   +......|+++|+.---+.++++..         .....+++.+..+ ..+.++| +.....
T Consensus       107 L~~~g~~~~i~tn~~---~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~-~~~~~igD~~~Di~  182 (224)
T d2hsza1         107 LKAQGYILAVVTNKP---TKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYP-KQILFVGDSQNDIF  182 (224)
T ss_dssp             HHHTTCEEEEECSSC---HHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCG-GGEEEEESSHHHHH
T ss_pred             HhccCCccccccccc---HHHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhhhh-hccchhcCcHHHHH
Confidence            788999999999944   4556677889998744455665432         2333334444433 4556666 444556


Q ss_pred             HHHHcCCeeeC
Q 025117           72 ELELAGFQYLG   82 (257)
Q Consensus        72 ~l~~~g~~~~~   82 (257)
                      ..+.+|+..+.
T Consensus       183 ~A~~aG~~~i~  193 (224)
T d2hsza1         183 AAHSAGCAVVG  193 (224)
T ss_dssp             HHHHHTCEEEE
T ss_pred             HHHHcCCeEEE
Confidence            66778887653

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=91.09  E-value=0.45  Score=34.63  Aligned_cols=73  Identities=16%  Similarity=0.170  Sum_probs=48.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|.++.++||++ .   ...+.|+++|+.---+.|+++.         ......+++.+.   ..+.++| +....+
T Consensus        91 l~~~g~~~~i~Sn~~-~---~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~---~~~l~vgDs~~Di~  163 (187)
T d2fi1a1          91 ISNQGGRHFLVSHRN-D---QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI---SSGLVIGDRPIDIE  163 (187)
T ss_dssp             HHHTTCEEEEECSSC-T---HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC---SSEEEEESSHHHHH
T ss_pred             HHhhhccccccccCc-c---chhhhhhhhccccccccccccccccccCCCHHHHHHHHHHcCC---CCeEEEeCCHHHHH
Confidence            678999999999953 2   4456788899875456677653         233344444443   3466777 556677


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+.+|+...
T Consensus       164 aA~~aG~~~i  173 (187)
T d2fi1a1         164 AGQAAGLDTH  173 (187)
T ss_dssp             HHHHTTCEEE
T ss_pred             HHHHcCCEEE
Confidence            7788898765

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=90.71  E-value=0.33  Score=35.71  Aligned_cols=76  Identities=18%  Similarity=0.202  Sum_probs=49.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|+++.++||++.    ...+.|+++|+.---+.|++|.         ......+++.+.++ ..++++| +....+
T Consensus        94 L~~~g~~~~v~Sn~~~----~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p-~~~l~VgD~~~Di~  168 (204)
T d2go7a1          94 ADESGIQQFIYTHKGN----NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNS-DNTYYIGDRTLDVE  168 (204)
T ss_dssp             HHHTTCEEEEECSSCT----HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCG-GGEEEEESSHHHHH
T ss_pred             ccccccchhhhcccch----hhhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCC-ceEEEEeCCHHHHH
Confidence            6789999999999542    2335688888874345565433         23445555656643 4677777 445566


Q ss_pred             HHHHcCCeeeC
Q 025117           72 ELELAGFQYLG   82 (257)
Q Consensus        72 ~l~~~g~~~~~   82 (257)
                      ..+.+|+..+.
T Consensus       169 ~A~~~G~~~i~  179 (204)
T d2go7a1         169 FAQNSGIQSIN  179 (204)
T ss_dssp             HHHHHTCEEEE
T ss_pred             HHHHcCCeEEE
Confidence            67888987753

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=90.26  E-value=0.42  Score=33.32  Aligned_cols=81  Identities=10%  Similarity=0.126  Sum_probs=47.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHh--------CCCCC-----CCCceec-hHHHHHHHHHhcCCCCCCEEEEEc-C
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFET--------LGLTV-----TEEEIFA-SSFAAAAYLKSIDFPKDKKVYVVG-E   66 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~--------~G~~~-----~~~~i~t-s~~~~~~~l~~~~~~~~~~v~vlg-~   66 (257)
                      |++.|..++++||-+...++...+.|..        .|...     ....-.. ....-...+.+....+...++++| +
T Consensus        48 l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~  127 (149)
T d1ltqa1          48 YALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDR  127 (149)
T ss_dssp             HHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECC
T ss_pred             HHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCC
Confidence            6788999999999887666555555543        23321     1122222 233444455443222234467778 4


Q ss_pred             HHHHHHHHHcCCeeeC
Q 025117           67 DGILKELELAGFQYLG   82 (257)
Q Consensus        67 ~~~~~~l~~~g~~~~~   82 (257)
                      +...+..+++|+.+..
T Consensus       128 ~~dv~a~~~~Gi~~~~  143 (149)
T d1ltqa1         128 TQVVEMWRRIGVECWQ  143 (149)
T ss_dssp             HHHHHHHHHTTCCEEE
T ss_pred             HHHHHHHHHCCCcEEE
Confidence            5678888999988753

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=88.99  E-value=0.57  Score=34.64  Aligned_cols=77  Identities=5%  Similarity=-0.004  Sum_probs=50.7

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |+++|+++.++||+   ++......++.+|+.---+.|+++..         ....-+++.++.+ .+++++| +.....
T Consensus       100 L~~~g~~~~i~T~~---~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~-~~~l~igD~~~di~  175 (218)
T d1te2a_         100 CKEQGLLVGLASAS---PLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDP-LTCVALEDSVNGMI  175 (218)
T ss_dssp             HHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCG-GGEEEEESSHHHHH
T ss_pred             hhhccccccccccc---cccccccccccccccccccccccccccccchhhHHHHHHHHHHcCCCc-hhcEEEeeCHHHHH
Confidence            78899999999995   55566777888999633345665422         2333344455543 4567777 445566


Q ss_pred             HHHHcCCeeeC
Q 025117           72 ELELAGFQYLG   82 (257)
Q Consensus        72 ~l~~~g~~~~~   82 (257)
                      ..+.+|+....
T Consensus       176 aA~~~G~~~i~  186 (218)
T d1te2a_         176 ASKAARMRSIV  186 (218)
T ss_dssp             HHHHTTCEEEE
T ss_pred             HHHHcCCEEEE
Confidence            77888987764

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=88.90  E-value=0.38  Score=36.84  Aligned_cols=77  Identities=14%  Similarity=0.107  Sum_probs=46.2

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCC-CCCceechH---------HHHHHHHHhcCCCCCCEEEEEc-CHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV-TEEEIFASS---------FAAAAYLKSIDFPKDKKVYVVG-EDGIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~-~~~~i~ts~---------~~~~~~l~~~~~~~~~~v~vlg-~~~~~   70 (257)
                      |+++|+++.++||++.   ......|+.+|+.- -.+-+++|.         ......+++.+..+...+.++| +....
T Consensus       111 Lk~~g~~i~i~Tn~~~---~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di  187 (257)
T d1swva_         111 LRERGIKIGSTTGYTR---EMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDM  187 (257)
T ss_dssp             HHHTTCEEEEBCSSCH---HHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHH
T ss_pred             HHhcccceeecCCCch---hhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHhCCCCcceEEEEeCChhhH
Confidence            7889999999999543   34444455555542 223344432         1234444555553445677888 55566


Q ss_pred             HHHHHcCCeee
Q 025117           71 KELELAGFQYL   81 (257)
Q Consensus        71 ~~l~~~g~~~~   81 (257)
                      ...+.+|+..+
T Consensus       188 ~aA~~aG~~ti  198 (257)
T d1swva_         188 KEGRNAGMWTV  198 (257)
T ss_dssp             HHHHHTTSEEE
T ss_pred             HHHHHCCCEEE
Confidence            67788898765

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=88.78  E-value=0.16  Score=38.83  Aligned_cols=43  Identities=21%  Similarity=0.339  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEcCChhhHHHHHHHcCCeEEEEccC
Q 025117          179 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG  223 (257)
Q Consensus       179 p~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G  223 (257)
                      -...+.+++++|+++++++.+||+ .+|+.+=+.+| .++.|...
T Consensus       164 ~~a~~~l~~~~gi~~~~~v~~GD~-~ND~~Ml~~~~-~~vav~na  206 (244)
T d1s2oa1         164 GNATQYLQQHLAMEPSQTLVCGDS-GNDIGLFETSA-RGVIVRNA  206 (244)
T ss_dssp             HHHHHHHHHHTTCCGGGEEEEECS-GGGHHHHTSSS-EEEECTTC
T ss_pred             hHHHHHHHHhccCChhhEEEEcCC-CCCHHHHhhCC-cEEEeCCC
Confidence            467789999999999999999999 69999999998 56666543

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.83  E-value=2  Score=31.79  Aligned_cols=76  Identities=16%  Similarity=0.138  Sum_probs=49.8

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHHH---------HHHHHHhcCCCCCCEEEEEcCH--HHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA---------AAAYLKSIDFPKDKKVYVVGED--GIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~~---------~~~~l~~~~~~~~~~v~vlg~~--~~~   70 (257)
                      |+ .|+++.++||+   +++.....|+.+|+.---+.|++|...         ...-+++.+..+ ++++++|-.  ...
T Consensus       112 l~-~~~~i~i~Sn~---~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p-~~~l~vgD~~~~Di  186 (230)
T d1x42a1         112 LK-GKYHVGMITDS---DTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKG-EEAVYVGDNPVKDC  186 (230)
T ss_dssp             HB-TTBEEEEEESS---CHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCG-GGEEEEESCTTTTH
T ss_pred             hh-ccCceeeeecc---ccccchhhhcccccccccccccccccccccchhhHHHHHHHhhhcccc-cccceeecCcHhHH
Confidence            44 57999999995   455667778889987445677766432         333344455543 557778753  346


Q ss_pred             HHHHHcCCeeeC
Q 025117           71 KELELAGFQYLG   82 (257)
Q Consensus        71 ~~l~~~g~~~~~   82 (257)
                      +..+++|+..+.
T Consensus       187 ~~A~~~G~~~v~  198 (230)
T d1x42a1         187 GGSKNLGMTSIL  198 (230)
T ss_dssp             HHHHTTTCEEEE
T ss_pred             HHHHHcCCEEEE
Confidence            667788987753

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=87.54  E-value=0.7  Score=34.10  Aligned_cols=50  Identities=14%  Similarity=0.137  Sum_probs=37.0

Q ss_pred             CCcEEEEcCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEECChhhHHHHHH
Q 025117          193 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA  254 (257)
Q Consensus       193 ~~~~~~IGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~~~l~el~~~l~  254 (257)
                      .+++++|||+ .+|+.+=+.+|. ++.|..|..          ...+.|++++..|+.++|+
T Consensus       170 ~~~~i~~GDs-~ND~~Mf~~~~~-~~av~~g~~----------~~~A~~~~~~~~ev~~~l~  219 (229)
T d1u02a_         170 ERPAIIAGDD-ATDEAAFEANDD-ALTIKVGEG----------ETHAKFHVADYIEMRKILK  219 (229)
T ss_dssp             TSCEEEEESS-HHHHHHHHTTTT-SEEEEESSS----------CCCCSEEESSHHHHHHHHH
T ss_pred             cccceeecCC-CChHHHHhccCC-eEEEEeCCC----------CccCeEEcCCHHHHHHHHH
Confidence            4689999999 699999888874 455555532          1367899999999766654

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.11  E-value=3  Score=29.30  Aligned_cols=76  Identities=13%  Similarity=0.046  Sum_probs=45.3

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHH-HHHhCCCCCCCCceechHH----HHHHHHHhcCCCCCCEEEEEc-CHHHHHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGK-KFETLGLTVTEEEIFASSF----AAAAYLKSIDFPKDKKVYVVG-EDGILKELEL   75 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~-~L~~~G~~~~~~~i~ts~~----~~~~~l~~~~~~~~~~v~vlg-~~~~~~~l~~   75 (257)
                      |+++|+++.++|||+..   .+++ .++.+|+..-...+.....    .....+++.+..+ ..+.++| +....+..+.
T Consensus        58 L~~~G~~~~v~S~~~~~---~~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~l~igD~~~di~aA~~  133 (164)
T d1u7pa_          58 LQSLGVPVAAASRTSEI---QGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPF-SQMVFFDDENRNIIDVGR  133 (164)
T ss_dssp             HHHTTCCEEEEECCSCH---HHHHHHHHHTTCGGGCSEEEESSSCHHHHHHHHHHHHCCCG-GGEEEEESCHHHHHHHHT
T ss_pred             HHHCCCcEEEEeccccc---hhhccchhcccccccceeeecccCCChHHHHHHHHHhCCCh-HHEEEEcCCHHHHHHHHH
Confidence            78899999999996642   2333 3566787644333433222    3334445556544 3455566 4556666777


Q ss_pred             cCCeee
Q 025117           76 AGFQYL   81 (257)
Q Consensus        76 ~g~~~~   81 (257)
                      +|+..+
T Consensus       134 aG~~~i  139 (164)
T d1u7pa_         134 LGVTCI  139 (164)
T ss_dssp             TTCEEE
T ss_pred             cCCEEE
Confidence            787664

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=85.07  E-value=4  Score=29.52  Aligned_cols=76  Identities=13%  Similarity=0.182  Sum_probs=48.9

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEc-CHHHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVG-EDGILK   71 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg-~~~~~~   71 (257)
                      |++.|+++.++||+.   .......+...|+..--+.+++|..         .....+++.+..+ ..++++| +.....
T Consensus       105 l~~~~~~~~i~tn~~---~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p-~e~l~VgD~~~Di~  180 (220)
T d1zrna_         105 LKRRGLKLAILSNGS---PQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDR-SAILFVASNAWDAT  180 (220)
T ss_dssp             HHHTTCEEEEEESSC---HHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCG-GGEEEEESCHHHHH
T ss_pred             HHhcCCeEEeecchH---HHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCC-ceEEEEecChHhHH
Confidence            678899999999965   3444556667777765566666543         2233344456544 4577777 444556


Q ss_pred             HHHHcCCeee
Q 025117           72 ELELAGFQYL   81 (257)
Q Consensus        72 ~l~~~g~~~~   81 (257)
                      ..+++|++.+
T Consensus       181 ~A~~aG~~~v  190 (220)
T d1zrna_         181 GARYFGFPTC  190 (220)
T ss_dssp             HHHHHTCCEE
T ss_pred             HHHHcCCEEE
Confidence            6688898865

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.19  E-value=0.91  Score=33.13  Aligned_cols=79  Identities=18%  Similarity=0.139  Sum_probs=47.5

Q ss_pred             hhccCCcEEEEeCCCCcCHHHHHHH-HHhCCCCCCCCceechHH---------HHHHHHHhcCCCCCCEEEEEcC-HHHH
Q 025117            2 LRSKGKRLVFVTNNSTKSRKQYGKK-FETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKVYVVGE-DGIL   70 (257)
Q Consensus         2 L~~~g~~~~~lTN~s~~~~~~~~~~-L~~~G~~~~~~~i~ts~~---------~~~~~l~~~~~~~~~~v~vlg~-~~~~   70 (257)
                      |++.|+++.++||+.....+..... ....|+.---+.|++|..         .....++..+..+. .+.++|- ....
T Consensus       111 L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~-e~l~VgD~~~Di  189 (225)
T d1zd3a1         111 LRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPS-EVVFLDDIGANL  189 (225)
T ss_dssp             HHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG-GEEEEESCHHHH
T ss_pred             HHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCcc-ceeEEecCHHHH
Confidence            6789999999999776655544443 334555433456666543         22333444555444 4556673 3455


Q ss_pred             HHHHHcCCeee
Q 025117           71 KELELAGFQYL   81 (257)
Q Consensus        71 ~~l~~~g~~~~   81 (257)
                      +..+++|++.+
T Consensus       190 ~~A~~~G~~ti  200 (225)
T d1zd3a1         190 KPARDLGMVTI  200 (225)
T ss_dssp             HHHHHTTCEEE
T ss_pred             HHHHHcCCEEE
Confidence            66678888765

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.72  E-value=1.8  Score=29.98  Aligned_cols=108  Identities=12%  Similarity=0.056  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHcCCCceEEEecCCCccccCCCcccccCchHHHHHHhccCCCccccCCCcHHHHHHHHHHhCCCCCcEEEE
Q 025117          120 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV  199 (257)
Q Consensus       120 ~~~~~~~~l~~~~~~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~I  199 (257)
                      +..+++..|++ .|+.+..-..|.....             ..+....|.+.. ++--.|+--...+++++.. ..+.||
T Consensus        25 ~a~~~I~~L~~-~Gi~v~ilTGD~~~~a-------------~~ia~~lgI~~v-~~~~~p~~k~~~v~~~q~~-~~v~~v   88 (135)
T d2b8ea1          25 SAKPAVQELKR-MGIKVGMITGDNWRSA-------------EAISRELNLDLV-IAEVLPHQKSEEVKKLQAK-EVVAFV   88 (135)
T ss_dssp             THHHHHHHHHH-TTCEEEEECSSCHHHH-------------HHHHHHHTCSEE-ECSCCHHHHHHHHHHHTTT-SCEEEE
T ss_pred             cHHHHHHHHHH-cCCEEEEEcCcchhhh-------------hHHHhhhhhhhh-ccccchhHHHHHHHHHHcC-CEEEEE
Confidence            45677888887 4664443335542211             112222233322 2333444444555666543 578999


Q ss_pred             cCChhhHHHHHHHcCCeEEEEccCCCChhhhcCCCCCCCCcEEE--CChhhHHHHH
Q 025117          200 GDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLK  253 (257)
Q Consensus       200 GD~~~~Di~~A~~aG~~ti~V~~G~~~~~~~~~~~~~~~pd~~~--~~l~el~~~l  253 (257)
                      ||. ..|..+-+.+++. +.+.++.    +...    ...|.++  ++|..|++.+
T Consensus        89 GDg-~nD~~aL~~Advg-ia~~~~~----~~~~----~aADivl~~~~l~~i~~aI  134 (135)
T d2b8ea1          89 GDG-INDAPALAQADLG-IAVGSGS----DVAV----ESGDIVLIRDDLRDVVAAI  134 (135)
T ss_dssp             ECS-SSSHHHHHHSSEE-EEECCC----------------SEEESSCCTHHHHHHH
T ss_pred             eCC-CCcHHHHHhCCee-eecCccC----HHHH----HhCCEEEECCCHHHHHHHh
Confidence            999 5999999999854 4444332    1111    4678887  5688887665

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=80.84  E-value=4.3  Score=29.75  Aligned_cols=76  Identities=12%  Similarity=0.115  Sum_probs=44.8

Q ss_pred             hhccC-CcEEEEeCCCCcCHHHHHHHHHhCCCCCCCCceechH---------HHHHHHHHhc---CCCCCCEEEEEcC-H
Q 025117            2 LRSKG-KRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSI---DFPKDKKVYVVGE-D   67 (257)
Q Consensus         2 L~~~g-~~~~~lTN~s~~~~~~~~~~L~~~G~~~~~~~i~ts~---------~~~~~~l~~~---~~~~~~~v~vlg~-~   67 (257)
                      |++.| .++.++||+   +++.....|+.+|+.---+.++++.         ......+++.   ++. ...++++|- .
T Consensus       103 L~~~g~~~~~v~t~~---~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~-p~~~l~VGD~~  178 (228)
T d2hcfa1         103 LSSRSDVLLGLLTGN---FEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYS-PSQIVIIGDTE  178 (228)
T ss_dssp             HHTCTTEEEEEECSS---CHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCC-GGGEEEEESSH
T ss_pred             hhccccccccccCCC---cchhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccCCC-hhHheeecCCh
Confidence            56776 788899995   4566777889999874444454431         1122222222   332 245777773 4


Q ss_pred             HHHHHHHHcCCeee
Q 025117           68 GILKELELAGFQYL   81 (257)
Q Consensus        68 ~~~~~l~~~g~~~~   81 (257)
                      ......+.+|+..+
T Consensus       179 ~Di~aA~~aG~~~i  192 (228)
T d2hcfa1         179 HDIRCARELDARSI  192 (228)
T ss_dssp             HHHHHHHTTTCEEE
T ss_pred             HHHHHHHHcCCEEE
Confidence            44555677787654