Citrus Sinensis ID: 025136
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 257 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FV50 | 350 | Methionine aminopeptidase | yes | no | 0.968 | 0.711 | 0.755 | 1e-108 | |
| Q9FV52 | 369 | Methionine aminopeptidase | no | no | 0.813 | 0.566 | 0.608 | 1e-67 | |
| Q9FV51 | 344 | Methionine aminopeptidase | no | no | 0.731 | 0.546 | 0.632 | 1e-62 | |
| Q54VU7 | 404 | Methionine aminopeptidase | yes | no | 0.712 | 0.452 | 0.572 | 8e-56 | |
| Q4VBS4 | 338 | Methionine aminopeptidase | yes | no | 0.770 | 0.585 | 0.520 | 1e-50 | |
| P0A5J3 | 285 | Methionine aminopeptidase | yes | no | 0.715 | 0.645 | 0.545 | 4e-50 | |
| P0A5J2 | 285 | Methionine aminopeptidase | yes | no | 0.715 | 0.645 | 0.545 | 4e-50 | |
| A6QLA4 | 386 | Methionine aminopeptidase | yes | no | 0.731 | 0.487 | 0.494 | 4e-48 | |
| P53582 | 386 | Methionine aminopeptidase | yes | no | 0.731 | 0.487 | 0.489 | 6e-48 | |
| Q5RBF3 | 386 | Methionine aminopeptidase | yes | no | 0.731 | 0.487 | 0.489 | 6e-48 |
| >sp|Q9FV50|AMP1D_ARATH Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1 | Back alignment and function desciption |
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Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/249 (75%), Positives = 212/249 (85%)
Query: 9 QLQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRNLDAEP 68
LQPRL+SSF+GN I STQPL LF ++ G+ VSMQLSRTFSGL DLLFNRRN D
Sbjct: 6 SLQPRLISSFLGNNSIRSTQPLIHLFRFDLGRRHVSMQLSRTFSGLTDLLFNRRNEDEVI 65
Query: 69 NRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQ 128
+ +RKRLRPG VSP RPVP HI +PPYV+S + GI SG EVHD+KGIECMR SG LAA+
Sbjct: 66 DGKRKRLRPGNVSPRRPVPGHITKPPYVDSLQAPGISSGLEVHDKKGIECMRASGILAAR 125
Query: 129 VLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 188
V +YAGTLVKPG+TTDEID+AVH MII+NGAYPSPLGYGGFPKSVCTSVNECICHGIPDS
Sbjct: 126 VRDYAGTLVKPGVTTDEIDEAVHNMIIENGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 185
Query: 189 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGME 248
R LEDGD INIDVTVYLNGYHGDTSATFFCG+VD++A+ LV+VTK+ L KAIS+C PG+E
Sbjct: 186 RPLEDGDIINIDVTVYLNGYHGDTSATFFCGNVDEKAKKLVEVTKESLDKAISICGPGVE 245
Query: 249 YKKIGKTIQ 257
YKKIGK I
Sbjct: 246 YKKIGKVIH 254
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Removes the N-terminal methionine from nascent proteins. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 8 |
| >sp|Q9FV52|AMP1B_ARATH Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9FV51|AMP1C_ARATH Methionine aminopeptidase 1C, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1C PE=2 SV=2 | Back alignment and function description |
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| >sp|Q54VU7|AMP1D_DICDI Methionine aminopeptidase 1D, mitochondrial OS=Dictyostelium discoideum GN=metap1d PE=3 SV=1 | Back alignment and function description |
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| >sp|Q4VBS4|AMP1D_DANRE Methionine aminopeptidase 1D, mitochondrial OS=Danio rerio GN=metap1d PE=2 SV=1 | Back alignment and function description |
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| >sp|P0A5J3|AMPM_MYCBO Methionine aminopeptidase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=map PE=3 SV=1 | Back alignment and function description |
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| >sp|P0A5J2|AMPM2_MYCTU Methionine aminopeptidase 2 OS=Mycobacterium tuberculosis GN=map PE=1 SV=1 | Back alignment and function description |
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| >sp|A6QLA4|AMPM1_BOVIN Methionine aminopeptidase 1 OS=Bos taurus GN=METAP1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P53582|AMPM1_HUMAN Methionine aminopeptidase 1 OS=Homo sapiens GN=METAP1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q5RBF3|AMPM1_PONAB Methionine aminopeptidase 1 OS=Pongo abelii GN=METAP1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 257 | ||||||
| 225438676 | 350 | PREDICTED: methionine aminopeptidase 1D, | 0.988 | 0.725 | 0.817 | 1e-118 | |
| 224081610 | 350 | predicted protein [Populus trichocarpa] | 0.988 | 0.725 | 0.793 | 1e-117 | |
| 255637733 | 260 | unknown [Glycine max] | 0.996 | 0.984 | 0.789 | 1e-114 | |
| 356496878 | 356 | PREDICTED: methionine aminopeptidase 1D, | 0.996 | 0.719 | 0.785 | 1e-114 | |
| 255565134 | 282 | methionine aminopeptidase, putative [Ric | 0.988 | 0.900 | 0.778 | 1e-113 | |
| 449460600 | 352 | PREDICTED: methionine aminopeptidase 1D, | 0.953 | 0.696 | 0.776 | 1e-109 | |
| 297798178 | 350 | hypothetical protein ARALYDRAFT_912645 [ | 0.964 | 0.708 | 0.766 | 1e-108 | |
| 18419957 | 350 | methionine aminopeptidase 1D [Arabidopsi | 0.968 | 0.711 | 0.755 | 1e-106 | |
| 357482963 | 351 | Methionine aminopeptidase [Medicago trun | 0.926 | 0.678 | 0.756 | 1e-102 | |
| 125541226 | 346 | hypothetical protein OsI_09032 [Oryza sa | 0.945 | 0.702 | 0.696 | 6e-95 |
| >gi|225438676|ref|XP_002282060.1| PREDICTED: methionine aminopeptidase 1D, chloroplastic/mitochondrial [Vitis vinifera] gi|296082435|emb|CBI21440.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/257 (81%), Positives = 227/257 (88%), Gaps = 3/257 (1%)
Query: 1 MVGGACSLQLQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFN 60
MVG + LQPRLLSSFVG+RF+ S +PL+QLF N G VSMQLSRTFSGL +LLFN
Sbjct: 1 MVGAS---SLQPRLLSSFVGDRFVQSQRPLHQLFRCNPGNKHVSMQLSRTFSGLTNLLFN 57
Query: 61 RRNLDAEPNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMR 120
RRNL+ PN +RKRLRPGK+SP RPVP HI RP YV S+KP GIVSGPEVHDEKGIECMR
Sbjct: 58 RRNLEGLPNSKRKRLRPGKLSPCRPVPGHILRPSYVTSKKPPGIVSGPEVHDEKGIECMR 117
Query: 121 VSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 180
SGRLAAQVLEYAGTLVKPGI TDEID+AVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC
Sbjct: 118 NSGRLAAQVLEYAGTLVKPGIKTDEIDEAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC 177
Query: 181 ICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAI 240
ICHGIPDSR LEDGD INIDVTVYLNGYHGDTSATFFCGDVDD+AR LV+VTK+CL KAI
Sbjct: 178 ICHGIPDSRPLEDGDIINIDVTVYLNGYHGDTSATFFCGDVDDKARKLVEVTKECLDKAI 237
Query: 241 SVCAPGMEYKKIGKTIQ 257
S+CAPG+E+KKIGKTI
Sbjct: 238 SICAPGVEFKKIGKTIH 254
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224081610|ref|XP_002306464.1| predicted protein [Populus trichocarpa] gi|222855913|gb|EEE93460.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255637733|gb|ACU19189.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|356496878|ref|XP_003517292.1| PREDICTED: methionine aminopeptidase 1D, chloroplastic/mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|255565134|ref|XP_002523559.1| methionine aminopeptidase, putative [Ricinus communis] gi|223537121|gb|EEF38754.1| methionine aminopeptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449460600|ref|XP_004148033.1| PREDICTED: methionine aminopeptidase 1D, chloroplastic/mitochondrial-like [Cucumis sativus] gi|449502729|ref|XP_004161726.1| PREDICTED: methionine aminopeptidase 1D, chloroplastic/mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297798178|ref|XP_002866973.1| hypothetical protein ARALYDRAFT_912645 [Arabidopsis lyrata subsp. lyrata] gi|297312809|gb|EFH43232.1| hypothetical protein ARALYDRAFT_912645 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|18419957|ref|NP_568014.1| methionine aminopeptidase 1D [Arabidopsis thaliana] gi|75172582|sp|Q9FV50.1|AMP1D_ARATH RecName: Full=Methionine aminopeptidase 1D, chloroplastic/mitochondrial; Short=MAP 1D; Short=MetAP 1D; AltName: Full=Peptidase M 1D; Flags: Precursor gi|11320960|gb|AAG33977.1|AF250963_1 methionine aminopeptidase-like protein [Arabidopsis thaliana] gi|21553973|gb|AAM63054.1| methionyl aminopeptidase-like protein [Arabidopsis thaliana] gi|26451668|dbj|BAC42930.1| putative ap2 methionine aminopeptidase [Arabidopsis thaliana] gi|28973551|gb|AAO64100.1| putative methionyl aminopeptidase [Arabidopsis thaliana] gi|332661340|gb|AEE86740.1| methionine aminopeptidase 1D [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|357482963|ref|XP_003611768.1| Methionine aminopeptidase [Medicago truncatula] gi|355513103|gb|AES94726.1| Methionine aminopeptidase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|125541226|gb|EAY87621.1| hypothetical protein OsI_09032 [Oryza sativa Indica Group] gi|125583775|gb|EAZ24706.1| hypothetical protein OsJ_08477 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 257 | ||||||
| TAIR|locus:2115125 | 350 | MAP1D "methionine aminopeptida | 0.961 | 0.705 | 0.761 | 2.7e-100 | |
| TAIR|locus:2205329 | 369 | MAP1C "methionine aminopeptida | 0.813 | 0.566 | 0.617 | 8.5e-65 | |
| TAIR|locus:2085979 | 344 | MAP1B "methionine aminopeptida | 0.696 | 0.520 | 0.653 | 3.5e-59 | |
| DICTYBASE|DDB_G0280127 | 404 | map1d "methionine aminopeptida | 0.766 | 0.487 | 0.55 | 1.9e-53 | |
| FB|FBgn0032247 | 317 | CG5188 [Drosophila melanogaste | 0.774 | 0.627 | 0.5 | 9.5e-50 | |
| ZFIN|ZDB-GENE-050522-71 | 338 | metap1d "methionyl aminopeptid | 0.770 | 0.585 | 0.520 | 2.3e-48 | |
| UNIPROTKB|P0A5J2 | 285 | map "Methionine aminopeptidase | 0.715 | 0.645 | 0.545 | 4.7e-48 | |
| UNIPROTKB|F1P5C7 | 320 | METAP1D "Methionine aminopepti | 0.684 | 0.55 | 0.559 | 7.7e-48 | |
| RGD|1307413 | 334 | Metap1d "methionyl aminopeptid | 0.684 | 0.526 | 0.559 | 4.2e-47 | |
| UNIPROTKB|F1PFF1 | 451 | METAP1D "Methionine aminopepti | 0.684 | 0.390 | 0.554 | 2.3e-46 |
| TAIR|locus:2115125 MAP1D "methionine aminopeptidase 1D" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
Identities = 188/247 (76%), Positives = 212/247 (85%)
Query: 10 LQPRLLSSFVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRNLDAEPN 69
LQPRL+SSF+GN I STQPL LF ++ G+ VSMQLSRTFSGL DLLFNRRN D +
Sbjct: 7 LQPRLISSFLGNNSIRSTQPLIHLFRFDLGRRHVSMQLSRTFSGLTDLLFNRRNEDEVID 66
Query: 70 RRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQV 129
+RKRLRPG VSP RPVP HI +PPYV+S + GI SG EVHD+KGIECMR SG LAA+V
Sbjct: 67 GKRKRLRPGNVSPRRPVPGHITKPPYVDSLQAPGISSGLEVHDKKGIECMRASGILAARV 126
Query: 130 LEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSR 189
+YAGTLVKPG+TTDEID+AVH MII+NGAYPSPLGYGGFPKSVCTSVNECICHGIPDSR
Sbjct: 127 RDYAGTLVKPGVTTDEIDEAVHNMIIENGAYPSPLGYGGFPKSVCTSVNECICHGIPDSR 186
Query: 190 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEY 249
LEDGD INIDVTVYLNGYHGDTSATFFCG+VD++A+ LV+VTK+ L KAIS+C PG+EY
Sbjct: 187 PLEDGDIINIDVTVYLNGYHGDTSATFFCGNVDEKAKKLVEVTKESLDKAISICGPGVEY 246
Query: 250 KKIGKTI 256
KKIGK I
Sbjct: 247 KKIGKVI 253
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| TAIR|locus:2205329 MAP1C "methionine aminopeptidase 1B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2085979 MAP1B "methionine aminopeptidase 1C" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0280127 map1d "methionine aminopeptidase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| FB|FBgn0032247 CG5188 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-050522-71 metap1d "methionyl aminopeptidase type 1D (mitochondrial)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P0A5J2 map "Methionine aminopeptidase 2" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P5C7 METAP1D "Methionine aminopeptidase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| RGD|1307413 Metap1d "methionyl aminopeptidase type 1D (mitochondrial)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PFF1 METAP1D "Methionine aminopeptidase" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P0A5J2 | AMPM2_MYCTU | 3, ., 4, ., 1, 1, ., 1, 8 | 0.5454 | 0.7159 | 0.6456 | yes | no |
| P0A5J3 | AMPM_MYCBO | 3, ., 4, ., 1, 1, ., 1, 8 | 0.5454 | 0.7159 | 0.6456 | yes | no |
| Q9FV50 | AMP1D_ARATH | 3, ., 4, ., 1, 1, ., 1, 8 | 0.7550 | 0.9688 | 0.7114 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.11.18 | 0.946 |
| 3rd Layer | 3.4.11 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | fgenesh4_pg.C_LG_V000509 | hypothetical protein; Removes the amino-terminal methionine from nascent proteins (By similarity) (350 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | gw1.IV.3048.1 | • | • | • | 0.848 | ||||||
 | eugene3.00141000 | • | • | • | 0.806 | ||||||
 | gw1.VI.8.1 | • | • | 0.804 | |||||||
 | rps8 | • | • | • | 0.793 | ||||||
 | gw1.16155.2.1 | • | • | • | 0.792 | ||||||
 | gw1.XVIII.2978.1 | • | • | 0.739 | |||||||
 | gw1.II.2942.1 | • | • | • | 0.734 | ||||||
 | estExt_Genewise1_v1.C_LG_X3691 | • | • | • | 0.722 | ||||||
 | estExt_fgenesh4_pg.C_13160002 | • | • | • | 0.711 | ||||||
 | gw1.VI.1738.1 | • | • | • | 0.709 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 257 | |||
| cd01086 | 238 | cd01086, MetAP1, Methionine Aminopeptidase 1 | 2e-79 | |
| PRK05716 | 252 | PRK05716, PRK05716, methionine aminopeptidase; Val | 6e-75 | |
| PLN03158 | 396 | PLN03158, PLN03158, methionine aminopeptidase; Pro | 1e-72 | |
| PRK12896 | 255 | PRK12896, PRK12896, methionine aminopeptidase; Rev | 9e-65 | |
| COG0024 | 255 | COG0024, Map, Methionine aminopeptidase [Translati | 3e-63 | |
| TIGR00500 | 247 | TIGR00500, met_pdase_I, methionine aminopeptidase, | 7e-58 | |
| pfam00557 | 208 | pfam00557, Peptidase_M24, Metallopeptidase family | 2e-41 | |
| PRK12318 | 291 | PRK12318, PRK12318, methionine aminopeptidase; Pro | 6e-39 | |
| cd01066 | 207 | cd01066, APP_MetAP, A family including aminopeptid | 6e-30 | |
| PRK12897 | 248 | PRK12897, PRK12897, methionine aminopeptidase; Rev | 7e-28 | |
| COG0006 | 384 | COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid | 1e-24 | |
| PRK08671 | 291 | PRK08671, PRK08671, methionine aminopeptidase; Pro | 4e-23 | |
| cd01092 | 208 | cd01092, APP-like, Similar to Prolidase and Aminop | 6e-21 | |
| cd01088 | 291 | cd01088, MetAP2, Methionine Aminopeptidase 2 | 9e-21 | |
| TIGR00501 | 295 | TIGR00501, met_pdase_II, methionine aminopeptidase | 1e-19 | |
| PRK07281 | 286 | PRK07281, PRK07281, methionine aminopeptidase; Rev | 2e-12 | |
| PTZ00053 | 470 | PTZ00053, PTZ00053, methionine aminopeptidase 2; P | 5e-07 | |
| cd01089 | 228 | cd01089, PA2G4-like, Related to aminopepdidase M, | 8e-07 | |
| cd01087 | 243 | cd01087, Prolidase, Prolidase | 7e-06 | |
| PRK10879 | 438 | PRK10879, PRK10879, proline aminopeptidase P II; P | 2e-05 | |
| TIGR00495 | 389 | TIGR00495, crvDNA_42K, 42K curved DNA binding prot | 1e-04 | |
| cd01066 | 207 | cd01066, APP_MetAP, A family including aminopeptid | 2e-04 | |
| PRK14575 | 406 | PRK14575, PRK14575, putative peptidase; Provisiona | 0.002 | |
| PRK15173 | 323 | PRK15173, PRK15173, peptidase; Provisional | 0.003 |
| >gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 | Back alignment and domain information |
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Score = 238 bits (611), Expect = 2e-79
Identities = 77/142 (54%), Positives = 104/142 (73%)
Query: 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT 175
IE MR +GR+ A+VL+ +KPG+TT E+D+ H+ I ++GAYP+PLGY GFPKS+CT
Sbjct: 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICT 60
Query: 176 SVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDC 235
SVNE +CHGIPD R L+DGD +NIDV V L+GYHGD++ TF G+V +EA+ LV+VT++
Sbjct: 61 SVNEVVCHGIPDDRVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEA 120
Query: 236 LHKAISVCAPGMEYKKIGKTIQ 257
L+K I PG IG I+
Sbjct: 121 LYKGIEAVKPGNRIGDIGHAIE 142
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E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. Length = 238 |
| >gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated | Back alignment and domain information |
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| >gnl|CDD|215607 PLN03158, PLN03158, methionine aminopeptidase; Provisional | Back alignment and domain information |
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| >gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed | Back alignment and domain information |
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| >gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
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| >gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I | Back alignment and domain information |
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| >gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 | Back alignment and domain information |
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| >gnl|CDD|183434 PRK12318, PRK12318, methionine aminopeptidase; Provisional | Back alignment and domain information |
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| >gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
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| >gnl|CDD|171806 PRK12897, PRK12897, methionine aminopeptidase; Reviewed | Back alignment and domain information |
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| >gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
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| >gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional | Back alignment and domain information |
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| >gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P | Back alignment and domain information |
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| >gnl|CDD|238521 cd01088, MetAP2, Methionine Aminopeptidase 2 | Back alignment and domain information |
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| >gnl|CDD|129592 TIGR00501, met_pdase_II, methionine aminopeptidase, type II | Back alignment and domain information |
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| >gnl|CDD|180918 PRK07281, PRK07281, methionine aminopeptidase; Reviewed | Back alignment and domain information |
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| >gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 | Back alignment and domain information |
|---|
| >gnl|CDD|238520 cd01087, Prolidase, Prolidase | Back alignment and domain information |
|---|
| >gnl|CDD|182804 PRK10879, PRK10879, proline aminopeptidase P II; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|129586 TIGR00495, crvDNA_42K, 42K curved DNA binding protein | Back alignment and domain information |
|---|
| >gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
|---|
| >gnl|CDD|173039 PRK14575, PRK14575, putative peptidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185095 PRK15173, PRK15173, peptidase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 257 | |||
| KOG2738 | 369 | consensus Putative methionine aminopeptidase [Post | 100.0 | |
| PLN03158 | 396 | methionine aminopeptidase; Provisional | 100.0 | |
| COG0024 | 255 | Map Methionine aminopeptidase [Translation, riboso | 100.0 | |
| PRK12897 | 248 | methionine aminopeptidase; Reviewed | 100.0 | |
| PRK12318 | 291 | methionine aminopeptidase; Provisional | 100.0 | |
| PRK07281 | 286 | methionine aminopeptidase; Reviewed | 100.0 | |
| TIGR00500 | 247 | met_pdase_I methionine aminopeptidase, type I. Met | 100.0 | |
| PRK12896 | 255 | methionine aminopeptidase; Reviewed | 100.0 | |
| COG0006 | 384 | PepP Xaa-Pro aminopeptidase [Amino acid transport | 100.0 | |
| PRK05716 | 252 | methionine aminopeptidase; Validated | 100.0 | |
| PRK09795 | 361 | aminopeptidase; Provisional | 99.98 | |
| PRK10879 | 438 | proline aminopeptidase P II; Provisional | 99.98 | |
| TIGR02993 | 391 | ectoine_eutD ectoine utilization protein EutD. Mem | 99.97 | |
| cd01090 | 228 | Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. | 99.97 | |
| PRK15173 | 323 | peptidase; Provisional | 99.97 | |
| PRK14575 | 406 | putative peptidase; Provisional | 99.97 | |
| PRK14576 | 405 | putative endopeptidase; Provisional | 99.97 | |
| cd01086 | 238 | MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 | 99.97 | |
| cd01087 | 243 | Prolidase Prolidase. E.C. 3.4.13.9. Also known as | 99.97 | |
| PRK13607 | 443 | proline dipeptidase; Provisional | 99.96 | |
| cd01092 | 208 | APP-like Similar to Prolidase and Aminopeptidase P | 99.96 | |
| TIGR00495 | 389 | crvDNA_42K 42K curved DNA binding protein. Protein | 99.96 | |
| PF00557 | 207 | Peptidase_M24: Metallopeptidase family M24 This Pr | 99.95 | |
| cd01089 | 228 | PA2G4-like Related to aminopepdidase M, this famil | 99.95 | |
| PTZ00053 | 470 | methionine aminopeptidase 2; Provisional | 99.95 | |
| cd01066 | 207 | APP_MetAP A family including aminopeptidase P, ami | 99.94 | |
| TIGR00501 | 295 | met_pdase_II methionine aminopeptidase, type II. M | 99.94 | |
| cd01085 | 224 | APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also | 99.94 | |
| PRK08671 | 291 | methionine aminopeptidase; Provisional | 99.93 | |
| cd01088 | 291 | MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 | 99.93 | |
| KOG2737 | 492 | consensus Putative metallopeptidase [General funct | 99.92 | |
| cd01091 | 243 | CDC68-like Related to aminopeptidase P and aminope | 99.91 | |
| KOG2414 | 488 | consensus Putative Xaa-Pro aminopeptidase [Amino a | 99.9 | |
| KOG2776 | 398 | consensus Metallopeptidase [General function predi | 99.54 | |
| KOG1189 | 960 | consensus Global transcriptional regulator, cell d | 99.53 | |
| KOG2775 | 397 | consensus Metallopeptidase [General function predi | 99.41 | |
| KOG2413 | 606 | consensus Xaa-Pro aminopeptidase [Amino acid trans | 99.3 | |
| COG5406 | 1001 | Nucleosome binding factor SPN, SPT16 subunit [Tran | 98.98 | |
| cd01066 | 207 | APP_MetAP A family including aminopeptidase P, ami | 97.76 | |
| cd01092 | 208 | APP-like Similar to Prolidase and Aminopeptidase P | 97.56 | |
| PRK05716 | 252 | methionine aminopeptidase; Validated | 97.38 | |
| TIGR00500 | 247 | met_pdase_I methionine aminopeptidase, type I. Met | 97.26 | |
| cd01086 | 238 | MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 | 97.25 | |
| PRK15173 | 323 | peptidase; Provisional | 97.22 | |
| PRK14575 | 406 | putative peptidase; Provisional | 97.15 | |
| PRK09795 | 361 | aminopeptidase; Provisional | 97.13 | |
| cd01090 | 228 | Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. | 97.1 | |
| PRK14576 | 405 | putative endopeptidase; Provisional | 97.06 | |
| PRK12897 | 248 | methionine aminopeptidase; Reviewed | 97.04 | |
| cd01091 | 243 | CDC68-like Related to aminopeptidase P and aminope | 96.98 | |
| TIGR02993 | 391 | ectoine_eutD ectoine utilization protein EutD. Mem | 96.97 | |
| PRK08671 | 291 | methionine aminopeptidase; Provisional | 96.96 | |
| PRK12318 | 291 | methionine aminopeptidase; Provisional | 96.96 | |
| PRK12896 | 255 | methionine aminopeptidase; Reviewed | 96.87 | |
| cd01088 | 291 | MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 | 96.8 | |
| PRK07281 | 286 | methionine aminopeptidase; Reviewed | 96.76 | |
| cd01087 | 243 | Prolidase Prolidase. E.C. 3.4.13.9. Also known as | 96.74 | |
| PF00557 | 207 | Peptidase_M24: Metallopeptidase family M24 This Pr | 96.66 | |
| PLN03158 | 396 | methionine aminopeptidase; Provisional | 96.53 | |
| cd01089 | 228 | PA2G4-like Related to aminopepdidase M, this famil | 96.28 | |
| COG0006 | 384 | PepP Xaa-Pro aminopeptidase [Amino acid transport | 96.21 | |
| TIGR00501 | 295 | met_pdase_II methionine aminopeptidase, type II. M | 96.13 | |
| COG0024 | 255 | Map Methionine aminopeptidase [Translation, riboso | 96.01 | |
| TIGR00495 | 389 | crvDNA_42K 42K curved DNA binding protein. Protein | 95.7 | |
| PRK10879 | 438 | proline aminopeptidase P II; Provisional | 95.35 | |
| PTZ00053 | 470 | methionine aminopeptidase 2; Provisional | 95.08 | |
| cd01085 | 224 | APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also | 93.45 | |
| PRK13607 | 443 | proline dipeptidase; Provisional | 93.09 | |
| KOG2738 | 369 | consensus Putative methionine aminopeptidase [Post | 86.0 |
| >KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-55 Score=391.76 Aligned_cols=190 Identities=64% Similarity=1.081 Sum_probs=181.6
Q ss_pred CCCCccCCCCccCCCCCCCCCCCCCCCCccCCCC----CCCcC-CCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 025136 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKP----IGIVS-GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (257)
Q Consensus 68 ~~~~~~~~~~g~~s~~~~vp~~i~~P~y~~~~~~----~~~~~-~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvT 142 (257)
.|.++++||||.+||+|.||+||++|+|+.++.+ +.... ...|++++||+.||+||++++++++.+...++||+|
T Consensus 69 ~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvT 148 (369)
T KOG2738|consen 69 KFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVT 148 (369)
T ss_pred cccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 5899999999999999999999999999999764 22222 457899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCC
Q 025136 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 222 (257)
Q Consensus 143 e~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~ 222 (257)
++|||+.+|++++++|+||+||||++||+++|+|+|+++|||+|+.|+|++||||+||++++++|||+|+++||++|+++
T Consensus 149 TdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vd 228 (369)
T KOG2738|consen 149 TDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVD 228 (369)
T ss_pred HHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccceEeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhhC
Q 025136 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 257 (257)
Q Consensus 223 ~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI~ 257 (257)
++.++|+++++||++.||+.+|||+++++|++.|+
T Consensus 229 e~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~ 263 (369)
T KOG2738|consen 229 EKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQ 263 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999885
|
|
| >PLN03158 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK12897 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK12318 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK07281 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00500 met_pdase_I methionine aminopeptidase, type I | Back alignment and domain information |
|---|
| >PRK12896 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK05716 methionine aminopeptidase; Validated | Back alignment and domain information |
|---|
| >PRK09795 aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK10879 proline aminopeptidase P II; Provisional | Back alignment and domain information |
|---|
| >TIGR02993 ectoine_eutD ectoine utilization protein EutD | Back alignment and domain information |
|---|
| >cd01090 Creatinase Creatine amidinohydrolase | Back alignment and domain information |
|---|
| >PRK15173 peptidase; Provisional | Back alignment and domain information |
|---|
| >PRK14575 putative peptidase; Provisional | Back alignment and domain information |
|---|
| >PRK14576 putative endopeptidase; Provisional | Back alignment and domain information |
|---|
| >cd01086 MetAP1 Methionine Aminopeptidase 1 | Back alignment and domain information |
|---|
| >cd01087 Prolidase Prolidase | Back alignment and domain information |
|---|
| >PRK13607 proline dipeptidase; Provisional | Back alignment and domain information |
|---|
| >cd01092 APP-like Similar to Prolidase and Aminopeptidase P | Back alignment and domain information |
|---|
| >TIGR00495 crvDNA_42K 42K curved DNA binding protein | Back alignment and domain information |
|---|
| >PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 | Back alignment and domain information |
|---|
| >PTZ00053 methionine aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
| >cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
|---|
| >TIGR00501 met_pdase_II methionine aminopeptidase, type II | Back alignment and domain information |
|---|
| >cd01085 APP X-Prolyl Aminopeptidase 2 | Back alignment and domain information |
|---|
| >PRK08671 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >cd01088 MetAP2 Methionine Aminopeptidase 2 | Back alignment and domain information |
|---|
| >KOG2737 consensus Putative metallopeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor | Back alignment and domain information |
|---|
| >KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2776 consensus Metallopeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2775 consensus Metallopeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
|---|
| >cd01092 APP-like Similar to Prolidase and Aminopeptidase P | Back alignment and domain information |
|---|
| >PRK05716 methionine aminopeptidase; Validated | Back alignment and domain information |
|---|
| >TIGR00500 met_pdase_I methionine aminopeptidase, type I | Back alignment and domain information |
|---|
| >cd01086 MetAP1 Methionine Aminopeptidase 1 | Back alignment and domain information |
|---|
| >PRK15173 peptidase; Provisional | Back alignment and domain information |
|---|
| >PRK14575 putative peptidase; Provisional | Back alignment and domain information |
|---|
| >PRK09795 aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >cd01090 Creatinase Creatine amidinohydrolase | Back alignment and domain information |
|---|
| >PRK14576 putative endopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK12897 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor | Back alignment and domain information |
|---|
| >TIGR02993 ectoine_eutD ectoine utilization protein EutD | Back alignment and domain information |
|---|
| >PRK08671 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK12318 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK12896 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >cd01088 MetAP2 Methionine Aminopeptidase 2 | Back alignment and domain information |
|---|
| >PRK07281 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >cd01087 Prolidase Prolidase | Back alignment and domain information |
|---|
| >PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PLN03158 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 | Back alignment and domain information |
|---|
| >COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00501 met_pdase_II methionine aminopeptidase, type II | Back alignment and domain information |
|---|
| >COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >TIGR00495 crvDNA_42K 42K curved DNA binding protein | Back alignment and domain information |
|---|
| >PRK10879 proline aminopeptidase P II; Provisional | Back alignment and domain information |
|---|
| >PTZ00053 methionine aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
| >cd01085 APP X-Prolyl Aminopeptidase 2 | Back alignment and domain information |
|---|
| >PRK13607 proline dipeptidase; Provisional | Back alignment and domain information |
|---|
| >KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 257 | ||||
| 3iu7_A | 288 | M. Tuberculosis Methionine Aminopeptidase With Mn I | 2e-51 | ||
| 1y1n_A | 291 | Identification Of Sh3 Motif In M. Tuberculosis Meth | 3e-51 | ||
| 3pka_A | 285 | M. Tuberculosis Metap With Bengamide Analog Y02, In | 3e-51 | ||
| 3ror_A | 291 | Crystal Structure Of C105s Mutant Of Mycobacterium | 2e-50 | ||
| 2b3h_A | 329 | Crystal Structure Of Human Methionine Aminopeptidas | 1e-49 | ||
| 4fli_A | 326 | Human Metap1 With Bengamide Analog Y16, In Mn Form | 4e-49 | ||
| 2g6p_A | 304 | Crystal Structure Of Truncated (Delta 1-89) Human M | 8e-49 | ||
| 4fuk_A | 337 | Aminopeptidase From Trypanosoma Brucei Length = 337 | 3e-45 | ||
| 3s6b_A | 368 | Crystal Structure Of Methionine Aminopeptidase 1b F | 4e-43 | ||
| 3mx6_A | 262 | Crystal Structure Of Methionine Aminopeptidase From | 2e-36 | ||
| 3mr1_A | 252 | Crystal Structure Of Methionine Aminopeptidase From | 3e-36 | ||
| 4mat_A | 278 | E.Coli Methionine Aminopeptidase His79ala Mutant Le | 2e-32 | ||
| 1xnz_A | 264 | Crystal Structure Of Mn(Ii) Form Of E. Coli. Methio | 2e-32 | ||
| 3mat_A | 265 | E.coli Methionine Aminopeptidase Transition-state I | 2e-32 | ||
| 2p99_A | 261 | E. Coli Methionine Aminopeptidase Monometalated Wit | 2e-32 | ||
| 2mat_A | 264 | E.Coli Methionine Aminopeptidase At 1.9 Angstrom Re | 2e-32 | ||
| 4a6v_A | 265 | X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn | 2e-32 | ||
| 2gu4_A | 263 | E. Coli Methionine Aminopeptidase In Complex With N | 2e-32 | ||
| 2p98_A | 262 | E. Coli Methionine Aminopeptidase Monometalated Wit | 2e-32 | ||
| 2gg0_A | 263 | Novel Bacterial Methionine Aminopeptidase Inhibitor | 2e-32 | ||
| 1c27_A | 263 | E. Coli Methionine Aminopeptidase:norleucine Phosph | 3e-32 | ||
| 2gtx_A | 261 | Structural Basis Of Catalysis By Mononuclear Methio | 3e-32 | ||
| 1qxw_A | 252 | Crystal Structure Of Staphyloccocus Aureus In Compl | 5e-22 | ||
| 3tav_A | 286 | Crystal Structure Of A Methionine Aminopeptidase Fr | 1e-21 | ||
| 3tb5_A | 264 | Crystal Structure Of The Enterococcus Faecalis Meth | 5e-20 | ||
| 1o0x_A | 262 | Crystal Structure Of Methionine Aminopeptidase (Tm1 | 8e-20 | ||
| 1xgs_A | 295 | Methionine Aminopeptidase From Hyperthermophile Pyr | 1e-16 | ||
| 2dfi_A | 301 | Crystal Structure Of Pf-Map(1-292)-C Length = 301 | 1e-16 | ||
| 3q6d_A | 356 | Xaa-Pro Dipeptidase From Bacillus Anthracis. Length | 9e-07 | ||
| 2v3z_A | 440 | Glu383ala Escherichia Coli Aminopeptidase P In Comp | 1e-06 | ||
| 1wl9_A | 440 | Structure Of Aminopeptidase P From E. Coli Length = | 2e-06 | ||
| 2bwv_A | 440 | His361ala Escherichia Coli Aminopeptidase P Length | 2e-06 | ||
| 2bwy_A | 440 | Glu383ala Escherichia Coli Aminopeptidase P Length | 4e-06 | ||
| 1m35_A | 440 | Aminopeptidase P From Escherichia Coli Length = 440 | 4e-06 | ||
| 1jaw_A | 440 | Aminopeptidase P From E. Coli Low Ph Form Length = | 4e-06 | ||
| 2bww_A | 440 | His350ala Escherichia Coli Aminopeptidase P Length | 4e-06 | ||
| 1pv9_A | 348 | Prolidase From Pyrococcus Furiosus Length = 348 | 2e-05 | ||
| 2bws_A | 440 | His243ala Escherichia Coli Aminopeptidase P Length | 2e-05 | ||
| 2v6c_A | 353 | Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) | 2e-05 | ||
| 2bwt_A | 440 | Asp260ala Escherichia Coli Aminopeptidase P Length | 3e-05 | ||
| 2bwu_A | 440 | Asp271ala Escherichia Coli Aminopeptidase P Length | 3e-05 | ||
| 2bwx_A | 441 | His354ala Escherichia Coli Aminopeptidase P Length | 4e-05 | ||
| 1wn1_A | 356 | Crystal Structure Of Dipeptiase From Pyrococcus Hor | 4e-05 | ||
| 1wy2_A | 351 | Crystal Structure Of The Prolidase From Pyrococcus | 6e-05 | ||
| 3j2i_A | 394 | Structure Of Late Pre-60s Ribosomal Subunits With N | 2e-04 | ||
| 2q8k_A | 401 | The Crystal Structure Of Ebp1 Length = 401 | 2e-04 |
| >pdb|3IU7|A Chain A, M. Tuberculosis Methionine Aminopeptidase With Mn Inhibitor A02 Length = 288 | Back alignment and structure |
|
| >pdb|1Y1N|A Chain A, Identification Of Sh3 Motif In M. Tuberculosis Methionine Aminopeptidase Suggests A Mode Of Interaction With The Ribosome Length = 291 | Back alignment and structure |
| >pdb|3PKA|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y02, In Mn Form Length = 285 | Back alignment and structure |
| >pdb|3ROR|A Chain A, Crystal Structure Of C105s Mutant Of Mycobacterium Tuberculosis Methionine Aminopeptidase Length = 291 | Back alignment and structure |
| >pdb|2B3H|A Chain A, Crystal Structure Of Human Methionine Aminopeptidase Type I With A Third Cobalt In The Active Site Length = 329 | Back alignment and structure |
| >pdb|4FLI|A Chain A, Human Metap1 With Bengamide Analog Y16, In Mn Form Length = 326 | Back alignment and structure |
| >pdb|2G6P|A Chain A, Crystal Structure Of Truncated (Delta 1-89) Human Methionine Aminopeptidase Type 1 In Complex With Pyridyl Pyrimidine Derivative Length = 304 | Back alignment and structure |
| >pdb|4FUK|A Chain A, Aminopeptidase From Trypanosoma Brucei Length = 337 | Back alignment and structure |
| >pdb|3S6B|A Chain A, Crystal Structure Of Methionine Aminopeptidase 1b From Plasmodium Falciparum, Pf10_0150 Length = 368 | Back alignment and structure |
| >pdb|3MX6|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Bound To Methionine Length = 262 | Back alignment and structure |
| >pdb|3MR1|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Length = 252 | Back alignment and structure |
| >pdb|4MAT|A Chain A, E.Coli Methionine Aminopeptidase His79ala Mutant Length = 278 | Back alignment and structure |
| >pdb|1XNZ|A Chain A, Crystal Structure Of Mn(Ii) Form Of E. Coli. Methionine Aminopeptidase In Complex With 5-(2-Chlorophenyl)furan-2- Carboxylic Acid Length = 264 | Back alignment and structure |
| >pdb|3MAT|A Chain A, E.coli Methionine Aminopeptidase Transition-state Inhibitor Complex Length = 265 | Back alignment and structure |
| >pdb|2P99|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye6 Length = 261 | Back alignment and structure |
| >pdb|2MAT|A Chain A, E.Coli Methionine Aminopeptidase At 1.9 Angstrom Resolution Length = 264 | Back alignment and structure |
| >pdb|4A6V|A Chain A, X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn Complexes Length = 265 | Back alignment and structure |
| >pdb|2GU4|A Chain A, E. Coli Methionine Aminopeptidase In Complex With Nlep, 1: 0.5, Di-Metalated Length = 263 | Back alignment and structure |
| >pdb|2P98|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye7 Length = 262 | Back alignment and structure |
| >pdb|2GG0|A Chain A, Novel Bacterial Methionine Aminopeptidase Inhibitors Length = 263 | Back alignment and structure |
| >pdb|1C27|A Chain A, E. Coli Methionine Aminopeptidase:norleucine Phosphonate Complex Length = 263 | Back alignment and structure |
| >pdb|2GTX|A Chain A, Structural Basis Of Catalysis By Mononuclear Methionine Aminopeptidase Length = 261 | Back alignment and structure |
| >pdb|1QXW|A Chain A, Crystal Structure Of Staphyloccocus Aureus In Complex With An Aminoketone Inhibitor 54135. Length = 252 | Back alignment and structure |
| >pdb|3TAV|A Chain A, Crystal Structure Of A Methionine Aminopeptidase From Mycobacterium Abscessus Length = 286 | Back alignment and structure |
| >pdb|3TB5|A Chain A, Crystal Structure Of The Enterococcus Faecalis Methionine Aminopeptidase Apo Form Length = 264 | Back alignment and structure |
| >pdb|1O0X|A Chain A, Crystal Structure Of Methionine Aminopeptidase (Tm1478) From Thermotoga Maritima At 1.90 A Resolution Length = 262 | Back alignment and structure |
| >pdb|1XGS|A Chain A, Methionine Aminopeptidase From Hyperthermophile Pyrococcus Furiosus Length = 295 | Back alignment and structure |
| >pdb|2DFI|A Chain A, Crystal Structure Of Pf-Map(1-292)-C Length = 301 | Back alignment and structure |
| >pdb|3Q6D|A Chain A, Xaa-Pro Dipeptidase From Bacillus Anthracis. Length = 356 | Back alignment and structure |
| >pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex With Substrate Length = 440 | Back alignment and structure |
| >pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli Length = 440 | Back alignment and structure |
| >pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
| >pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
| >pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli Length = 440 | Back alignment and structure |
| >pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form Length = 440 | Back alignment and structure |
| >pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
| >pdb|1PV9|A Chain A, Prolidase From Pyrococcus Furiosus Length = 348 | Back alignment and structure |
| >pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
| >pdb|2V6C|A Chain A, Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) Length = 353 | Back alignment and structure |
| >pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
| >pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P Length = 440 | Back alignment and structure |
| >pdb|1WN1|A Chain A, Crystal Structure Of Dipeptiase From Pyrococcus Horikoshii Ot3 Length = 356 | Back alignment and structure |
| >pdb|1WY2|A Chain A, Crystal Structure Of The Prolidase From Pyrococcus Horikoshii Ot3 Length = 351 | Back alignment and structure |
| >pdb|3J2I|A Chain A, Structure Of Late Pre-60s Ribosomal Subunits With Nuclear Export Factor Arx1 Bound At The Peptide Exit Tunnel Length = 394 | Back alignment and structure |
| >pdb|2Q8K|A Chain A, The Crystal Structure Of Ebp1 Length = 401 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A Length = 285 | Back alignment and structure |
|---|
Score = 335 bits (861), Expect = e-117
Identities = 100/186 (53%), Positives = 122/186 (65%), Gaps = 1/186 (0%)
Query: 72 RKRLRPGKVSPHRPVPDHIPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLE 131
R L PG +SP RPVP+ I RP YV S P V + IE MRV+GR+AA L
Sbjct: 4 RTALSPGVLSPTRPVPNWIARPEYVGKPAAQ-EGSEPWVQTPEVIEKMRVAGRIAAGALA 62
Query: 132 YAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRAL 191
AG V PG+TTDE+D+ H+ ++DNGAYPS LGY GFPKS CTS+NE ICHGIPDS +
Sbjct: 63 EAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVI 122
Query: 192 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKK 251
DGD +NIDVT Y+ G HGDT+ATF GDV DE R LV T++ +AI+ PG
Sbjct: 123 TDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSV 182
Query: 252 IGKTIQ 257
IG+ I+
Sbjct: 183 IGRVIE 188
|
| >3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Length = 368 | Back alignment and structure |
|---|
| >2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Length = 329 | Back alignment and structure |
|---|
| >3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Length = 262 | Back alignment and structure |
|---|
| >2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Length = 263 | Back alignment and structure |
|---|
| >1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Length = 252 | Back alignment and structure |
|---|
| >3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Length = 264 | Back alignment and structure |
|---|
| >1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Length = 262 | Back alignment and structure |
|---|
| >3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Length = 286 | Back alignment and structure |
|---|
| >1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 | Back alignment and structure |
|---|
| >2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 | Back alignment and structure |
|---|
| >1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 | Back alignment and structure |
|---|
| >3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 | Back alignment and structure |
|---|
| >1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 | Back alignment and structure |
|---|
| >2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 | Back alignment and structure |
|---|
| >1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 | Back alignment and structure |
|---|
| >1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 | Back alignment and structure |
|---|
| >1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 | Back alignment and structure |
|---|
| >4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 | Back alignment and structure |
|---|
| >3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 | Back alignment and structure |
|---|
| >4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 | Back alignment and structure |
|---|
| >3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Length = 467 | Back alignment and structure |
|---|
| >3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 | Back alignment and structure |
|---|
| >3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Length = 427 | Back alignment and structure |
|---|
| >2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Length = 494 | Back alignment and structure |
|---|
| >3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 | Back alignment and structure |
|---|
| >2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Length = 440 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 257 | |||
| 4fuk_A | 337 | Methionine aminopeptidase; structural genomics con | 100.0 | |
| 3s6b_A | 368 | Methionine aminopeptidase; malaria, proteolysis, " | 100.0 | |
| 2b3h_A | 329 | Methionine aminopeptidase 1; hydrolase, metallopro | 100.0 | |
| 3pka_A | 285 | Methionine aminopeptidase; hydrolase-hydrolase inh | 100.0 | |
| 3tb5_A | 264 | Methionine aminopeptidase; hydrolase, metalloprote | 100.0 | |
| 3mx6_A | 262 | Methionine aminopeptidase; seattle structural geno | 100.0 | |
| 3tav_A | 286 | Methionine aminopeptidase; ssgcid, seattle structu | 100.0 | |
| 1o0x_A | 262 | Methionine aminopeptidase; TM1478, structural geno | 100.0 | |
| 2gg2_A | 263 | Methionine aminopeptidase; PITA-bread fold, MAP in | 100.0 | |
| 1qxy_A | 252 | Methionyl aminopeptidase; PITA bread fold, hydrola | 100.0 | |
| 3q6d_A | 356 | Proline dipeptidase; structural genomics, csgid, c | 100.0 | |
| 2zsg_A | 359 | Aminopeptidase P, putative; hydrolase; 1.65A {Ther | 100.0 | |
| 1wy2_A | 351 | XAA-Pro dipeptidase; structural genomics, prolidas | 100.0 | |
| 3ig4_A | 427 | XAA-Pro aminopeptidase; csgid, hydrolase, struct g | 100.0 | |
| 1wn1_A | 356 | Dipeptidase; prolidase, cobalt(II), structural gen | 100.0 | |
| 2v3z_A | 440 | XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli | 100.0 | |
| 2q8k_A | 401 | Proliferation-associated protein 2G4; EBP1, PA2G4, | 100.0 | |
| 4fkc_A | 377 | XAA-Pro aminopeptidase; PITA-bread structure, prol | 100.0 | |
| 4ege_A | 378 | Dipeptidase PEPE; structural genomics, seattle str | 100.0 | |
| 1kp0_A | 402 | Creatine amidinohydrolase; alpha betal, 3-layer(AB | 99.97 | |
| 3fm3_A | 358 | Methionine aminopeptidase 2; metap2, structural ge | 99.97 | |
| 2iw2_A | 494 | XAA-Pro dipeptidase; metallocarboxypeptidase, dise | 99.97 | |
| 3rva_A | 451 | Organophosphorus acid anhydrolase; PITA-bread fold | 99.97 | |
| 1chm_A | 401 | Creatine amidinohydrolase; creatinase; 1.90A {Pseu | 99.97 | |
| 4b28_A | 470 | Metallopeptidase, family M24, putative; lyase, ime | 99.97 | |
| 3l24_A | 517 | XAA-Pro dipeptidase; PITA-bread, detoxification, h | 99.97 | |
| 3biq_A | 467 | FACT complex subunit SPT16; PITA-bread, aminopepti | 99.96 | |
| 2nw5_A | 360 | Methionine aminopeptidase 2; metap2, structural ge | 99.96 | |
| 1xgs_A | 295 | Methionine aminopeptidase; hyperthermophIle; 1.75A | 99.96 | |
| 3cb6_A | 444 | FACT complex subunit SPT16; peptidase homology dom | 99.96 | |
| 1b6a_A | 478 | Methionine aminopeptidase; angiogenesis inhibitor; | 99.95 | |
| 3ctz_A | 623 | XAA-Pro aminopeptidase 1; PITA-bread fold, alterna | 99.94 | |
| 4b6a_t | 614 | Probable metalloprotease ARX1; large ribosomal sub | 99.73 | |
| 3q6d_A | 356 | Proline dipeptidase; structural genomics, csgid, c | 97.04 | |
| 4ege_A | 378 | Dipeptidase PEPE; structural genomics, seattle str | 96.9 | |
| 1wy2_A | 351 | XAA-Pro dipeptidase; structural genomics, prolidas | 96.82 | |
| 2zsg_A | 359 | Aminopeptidase P, putative; hydrolase; 1.65A {Ther | 96.82 | |
| 3pka_A | 285 | Methionine aminopeptidase; hydrolase-hydrolase inh | 96.79 | |
| 1wn1_A | 356 | Dipeptidase; prolidase, cobalt(II), structural gen | 96.76 | |
| 3mx6_A | 262 | Methionine aminopeptidase; seattle structural geno | 96.75 | |
| 1o0x_A | 262 | Methionine aminopeptidase; TM1478, structural geno | 96.75 | |
| 2gg2_A | 263 | Methionine aminopeptidase; PITA-bread fold, MAP in | 96.49 | |
| 3tb5_A | 264 | Methionine aminopeptidase; hydrolase, metalloprote | 96.46 | |
| 3cb6_A | 444 | FACT complex subunit SPT16; peptidase homology dom | 96.45 | |
| 3tav_A | 286 | Methionine aminopeptidase; ssgcid, seattle structu | 96.43 | |
| 1qxy_A | 252 | Methionyl aminopeptidase; PITA bread fold, hydrola | 96.42 | |
| 4fkc_A | 377 | XAA-Pro aminopeptidase; PITA-bread structure, prol | 96.41 | |
| 3biq_A | 467 | FACT complex subunit SPT16; PITA-bread, aminopepti | 96.28 | |
| 1kp0_A | 402 | Creatine amidinohydrolase; alpha betal, 3-layer(AB | 96.19 | |
| 2b3h_A | 329 | Methionine aminopeptidase 1; hydrolase, metallopro | 96.15 | |
| 2v3z_A | 440 | XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli | 96.06 | |
| 3ig4_A | 427 | XAA-Pro aminopeptidase; csgid, hydrolase, struct g | 96.06 | |
| 3s6b_A | 368 | Methionine aminopeptidase; malaria, proteolysis, " | 96.06 | |
| 1xgs_A | 295 | Methionine aminopeptidase; hyperthermophIle; 1.75A | 95.83 | |
| 1chm_A | 401 | Creatine amidinohydrolase; creatinase; 1.90A {Pseu | 95.67 | |
| 2nw5_A | 360 | Methionine aminopeptidase 2; metap2, structural ge | 94.83 | |
| 3rva_A | 451 | Organophosphorus acid anhydrolase; PITA-bread fold | 94.61 | |
| 2q8k_A | 401 | Proliferation-associated protein 2G4; EBP1, PA2G4, | 94.55 | |
| 4fuk_A | 337 | Methionine aminopeptidase; structural genomics con | 94.26 | |
| 4b28_A | 470 | Metallopeptidase, family M24, putative; lyase, ime | 93.78 | |
| 1b6a_A | 478 | Methionine aminopeptidase; angiogenesis inhibitor; | 93.56 | |
| 3ctz_A | 623 | XAA-Pro aminopeptidase 1; PITA-bread fold, alterna | 93.48 | |
| 3l24_A | 517 | XAA-Pro dipeptidase; PITA-bread, detoxification, h | 93.4 | |
| 2iw2_A | 494 | XAA-Pro dipeptidase; metallocarboxypeptidase, dise | 92.64 | |
| 3fm3_A | 358 | Methionine aminopeptidase 2; metap2, structural ge | 80.23 |
| >4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=345.98 Aligned_cols=189 Identities=47% Similarity=0.805 Sum_probs=177.2
Q ss_pred CCCCccCCCCccCCCCCCCCCCCCCCCCccCCCC----------------CCCcCCCCcCCHHHHHHHHHHHHHHHHHHH
Q 025136 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKP----------------IGIVSGPEVHDEKGIECMRVSGRLAAQVLE 131 (257)
Q Consensus 68 ~~~~~~~~~~g~~s~~~~vp~~i~~P~y~~~~~~----------------~~~~~~R~VKs~~EIe~mR~A~~ia~~al~ 131 (257)
+|+|+++||||.+||++.||+||++|+|+..... ......|.|||++||++||+||++++++++
T Consensus 5 ~~~~~g~~~p~~~sp~~~vP~~i~~p~y~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~a~~ 84 (337)
T 4fuk_A 5 TFDFTGPLRPGKITPRRAVPSHILRPDYADRAGGVSASEEKDRGSKVKVYNIQFLHDDSKKTAEIQRIKTVCQLSREVLD 84 (337)
T ss_dssp CCCCCSSCCCCCCCCCCCCCTTSCCCTTSSSTTCCCHHHHHHTTCCCCCCCCTTTTCTTC--CHHHHHHHHHHHHHHHHH
T ss_pred CcceecccccccCCCCCCCCCCCCCCCcccCCCCCCccccccccCccccccchhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999864321 122356899999999999999999999999
Q ss_pred HHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCCEEEEEecceeCcEEEe
Q 025136 132 YAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGD 211 (257)
Q Consensus 132 ~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD 211 (257)
.+.+.++||+||.||++.+++++.++|+++++++|.+||+++|+|.|+++||++|++++|++||+|++|+|+.|+||++|
T Consensus 85 ~~~~~ikpG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~~H~~~~~~~l~~GD~v~iD~g~~~~GY~sD 164 (337)
T 4fuk_A 85 IATAAAKPGITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNEVICHGIPDSRELEEGDILNIDVSSYLNGFHGD 164 (337)
T ss_dssp HHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCSCBCCTTCEEEEEEEEEETTEEEE
T ss_pred HHHHHccCCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccccccCCCCCCccccCCCEEEEecceeECCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 212 TSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 212 ~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
+||||++|+++++++++|+++++|++++++++|||++++||++++
T Consensus 165 ~tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kpG~~~~di~~~~ 209 (337)
T 4fuk_A 165 LNETVFIGRPDDDSVRLVHAAYECLCAGIGVVKPEALYKQVGDAI 209 (337)
T ss_dssp EEEEEESSSCCHHHHHHHHHHHHHHHHHHTTCSTTCBTTHHHHHH
T ss_pred eeeeEEeCCccHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHH
Confidence 999999999999999999999999999999999999999999886
|
| >3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* | Back alignment and structure |
|---|
| >3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A | Back alignment and structure |
|---|
| >3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A | Back alignment and structure |
|---|
| >3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
| >1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 | Back alignment and structure |
|---|
| >2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... | Back alignment and structure |
|---|
| >1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* | Back alignment and structure |
|---|
| >3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} | Back alignment and structure |
|---|
| >2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A | Back alignment and structure |
|---|
| >3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} | Back alignment and structure |
|---|
| >1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A | Back alignment and structure |
|---|
| >2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... | Back alignment and structure |
|---|
| >2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A | Back alignment and structure |
|---|
| >4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} | Back alignment and structure |
|---|
| >4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
| >1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
| >3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* | Back alignment and structure |
|---|
| >2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A | Back alignment and structure |
|---|
| >3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} | Back alignment and structure |
|---|
| >1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
| >4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} | Back alignment and structure |
|---|
| >3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* | Back alignment and structure |
|---|
| >3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* | Back alignment and structure |
|---|
| >1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A | Back alignment and structure |
|---|
| >3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A | Back alignment and structure |
|---|
| >1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* | Back alignment and structure |
|---|
| >3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} | Back alignment and structure |
|---|
| >4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
| >1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A | Back alignment and structure |
|---|
| >2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} | Back alignment and structure |
|---|
| >3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A | Back alignment and structure |
|---|
| >1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A | Back alignment and structure |
|---|
| >3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A | Back alignment and structure |
|---|
| >1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 | Back alignment and structure |
|---|
| >2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... | Back alignment and structure |
|---|
| >3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A | Back alignment and structure |
|---|
| >3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
| >1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* | Back alignment and structure |
|---|
| >4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} | Back alignment and structure |
|---|
| >3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* | Back alignment and structure |
|---|
| >1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
| >2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* | Back alignment and structure |
|---|
| >2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... | Back alignment and structure |
|---|
| >3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} | Back alignment and structure |
|---|
| >3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A | Back alignment and structure |
|---|
| >1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
| >3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} | Back alignment and structure |
|---|
| >2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A | Back alignment and structure |
|---|
| >4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
| >4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} | Back alignment and structure |
|---|
| >1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* | Back alignment and structure |
|---|
| >3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* | Back alignment and structure |
|---|
| >2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A | Back alignment and structure |
|---|
| >3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 257 | ||||
| d2gg2a1 | 262 | d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc | 6e-33 | |
| d1b6aa2 | 295 | d.127.1.1 (A:110-374,A:449-478) Methionine aminope | 3e-24 | |
| d1o0xa_ | 249 | d.127.1.1 (A:) Methionine aminopeptidase {Thermoto | 2e-20 | |
| d2v3za2 | 264 | d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal | 9e-19 | |
| d1qxya_ | 249 | d.127.1.1 (A:) Methionine aminopeptidase {Staphylo | 6e-18 | |
| d1pv9a2 | 221 | d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal | 5e-17 | |
| d1xgsa2 | 218 | d.127.1.1 (A:1-194,A:272-295) Methionine aminopept | 3e-16 | |
| d1chma2 | 246 | d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter | 8e-16 |
| >d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Escherichia coli [TaxId: 562]
Score = 118 bits (297), Expect = 6e-33
Identities = 68/151 (45%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Query: 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII-DNGAYPSPLGYG 167
+ + IE MRV+GRLAA+VLE VKPG++T E+D+ + I+ + A + LGY
Sbjct: 2 SIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYH 61
Query: 168 GFPKSVCTSVNECICHGIP-DSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEAR 226
G+PKSVC S+NE +CHGIP D++ L+DGD +NIDVTV +G+HGDTS F G
Sbjct: 62 GYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGE 121
Query: 227 NLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 257
L ++T++ L+ A+ + PG+ ++IG IQ
Sbjct: 122 RLCRITQESLYLALRMVKPGINLREIGAAIQ 152
|
| >d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 | Back information, alignment and structure |
|---|
| >d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 | Back information, alignment and structure |
|---|
| >d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 | Back information, alignment and structure |
|---|
| >d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 | Back information, alignment and structure |
|---|
| >d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 | Back information, alignment and structure |
|---|
| >d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 | Back information, alignment and structure |
|---|
| >d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 257 | |||
| d1o0xa_ | 249 | Methionine aminopeptidase {Thermotoga maritima [Ta | 100.0 | |
| d1pv9a2 | 221 | Aminopeptidase P, C-terminal domain {Archaeon Pyro | 99.98 | |
| d1qxya_ | 249 | Methionine aminopeptidase {Staphylococcus aureus [ | 99.98 | |
| d2gg2a1 | 262 | Methionine aminopeptidase {Escherichia coli [TaxId | 99.97 | |
| d1chma2 | 246 | Creatinase, catalytic (C-terminal) domain {Pseudom | 99.97 | |
| d2v3za2 | 264 | Aminopeptidase P, C-terminal domain {Escherichia c | 99.97 | |
| d1b6aa2 | 295 | Methionine aminopeptidase {Human (Homo sapiens) [T | 99.95 | |
| d1xgsa2 | 218 | Methionine aminopeptidase {Archaeon Pyrococcus fur | 99.95 | |
| d1pv9a2 | 221 | Aminopeptidase P, C-terminal domain {Archaeon Pyro | 97.34 | |
| d1chma2 | 246 | Creatinase, catalytic (C-terminal) domain {Pseudom | 96.74 | |
| d2gg2a1 | 262 | Methionine aminopeptidase {Escherichia coli [TaxId | 96.7 | |
| d1xgsa2 | 218 | Methionine aminopeptidase {Archaeon Pyrococcus fur | 96.56 | |
| d1o0xa_ | 249 | Methionine aminopeptidase {Thermotoga maritima [Ta | 95.8 | |
| d1qxya_ | 249 | Methionine aminopeptidase {Staphylococcus aureus [ | 95.61 | |
| d2v3za2 | 264 | Aminopeptidase P, C-terminal domain {Escherichia c | 94.44 | |
| d1b6aa2 | 295 | Methionine aminopeptidase {Human (Homo sapiens) [T | 85.72 |
| >d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.8e-32 Score=236.17 Aligned_cols=150 Identities=29% Similarity=0.579 Sum_probs=141.7
Q ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCC
Q 025136 107 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP 186 (257)
Q Consensus 107 ~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p 186 (257)
||.||||+||++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+.+.+.++.+++..++.+.++..+|+.+
T Consensus 1 m~~IKs~~Ei~~mr~A~~ia~~~~~~~~~~i~~G~te~ev~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (249)
T d1o0xa_ 1 MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHGLP 80 (249)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBCSCCCC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHhhhhhhccccccccccccccCcccccceee
Confidence 68999999999999999999999999999999999999999999999999999888777777888888888888888765
Q ss_pred -CCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 187 -DSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 187 -~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
+++.+++||+|.+|+++.++||++|++|||++|+++++++++|++++++++++++.+|||++++||++++
T Consensus 81 ~~~~~~~~gd~v~id~g~~~~gy~~D~~RT~~~G~~s~~~~~~~~~~~~a~~a~i~~~kpG~~~~dv~~~~ 151 (249)
T d1o0xa_ 81 LKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCI 151 (249)
T ss_dssp CTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHH
T ss_pred ccccccccccceeeecceeecceecccccceeecCcChhhHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 5788999999999999999999999999999999999999999999999999999999999999999875
|
| >d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|