Citrus Sinensis ID: 025190
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 256 | 2.2.26 [Sep-21-2011] | |||||||
| P53078 | 280 | Suppressor of disruption | yes | no | 0.816 | 0.746 | 0.307 | 1e-17 | |
| P40025 | 321 | Phosphate metabolism prot | no | no | 0.769 | 0.613 | 0.290 | 3e-14 | |
| Q09893 | 226 | Uncharacterized protein C | yes | no | 0.695 | 0.787 | 0.291 | 2e-13 | |
| Q9V1B3 | 238 | Uncharacterized HAD-hydro | yes | no | 0.773 | 0.831 | 0.260 | 3e-05 | |
| O59346 | 241 | Uncharacterized HAD-hydro | yes | no | 0.777 | 0.825 | 0.248 | 0.0003 |
| >sp|P53078|SDT1_YEAST Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
FD+D+ LY S T I ++++I F S A L +K YG + GL +
Sbjct: 58 FFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VM 116
Query: 68 GYDIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQ-----RKIIFTNSDRNHAITCL 121
+ + A +Y+ V LP D++KPD LRN+L + Q + +FTN+ +NHAI CL
Sbjct: 117 FHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCL 176
Query: 122 KRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP-RHALFL 180
+ L IAD FD + +R D ++ KP + A + A+ + + +A F+
Sbjct: 177 RLLGIADLFDGL--------TYCDYSRTD--TLVCKPHVKAFEKAMKESGLARYENAYFI 226
Query: 181 DDNIKNVTAGKALGLRTV--LVGKTVN-----VGEADYALENVNNLPQVVPEIW 227
DD+ KN+ G LG++T LV VN E + ++ LP VV +++
Sbjct: 227 DDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF 280
|
Could be an enzyme that inactivates 6-azauracil by modifying it. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|P40025|PHM8_YEAST Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHM8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRA 66
FD+D+TLY T + +++++ F + GF + +A L ++ YG ++ GL
Sbjct: 54 VFFFDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIK 113
Query: 67 LGYDIGADDYHGFVHGRLP-YDLIKPDPQLRN-------LLCSITQRKIIFTNSDRNHAI 118
Y+ F+ LP D +KPD +LR + +FTNS +NHAI
Sbjct: 114 NKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAI 173
Query: 119 TCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA-LHVANVDPRHA 177
C+K L IAD FD I RP E + KP + A L +A
Sbjct: 174 RCVKILGIADLFDGI--------TYCHYDRPIEEEFICKPDPKFFETAKLQSGLSSFANA 225
Query: 178 LFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVN 217
F+DDN NV + ++G+ G +++ E DY E+ N
Sbjct: 226 WFIDDNESNVRSALSMGM-----GHVIHLIE-DYQYESEN 259
|
May be involved in phosphate metabolism. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
+ FDLD+ LYP I + I F +K G +A LR ++ YG + GL L
Sbjct: 8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66
Query: 68 GYDIGADDYHGFVHGRLPYD-LIKPDPQLRNLLCSITQRK--IIFTNSDRNHAITCLKRL 124
++I A DY V LP + +IK D LR +L + ++ IFTN+ HA LK L
Sbjct: 67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126
Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184
I DCFD I + +L P+ + +++ + D +F+DD+
Sbjct: 127 GIEDCFDGITYCDYNAKDLIAKPMPEMYERVMREA----------GVTDKDKCIFVDDSY 176
Query: 185 KNVTAGKALGLR 196
N+ + G +
Sbjct: 177 GNILGAREFGWK 188
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q9V1B3|YB10_PYRAB Uncharacterized HAD-hydrolase PYRAB05140 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=PYRAB05140 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 95/242 (39%), Gaps = 44/242 (18%)
Query: 6 NCLVFDLDDTLYPSETGIAAAVKRN-IEGFLIEKCGFSETKASSLRVELFKAYGSTLAG- 63
+ FDLDDTL + T +A +RN IE + A S +EL K YGS
Sbjct: 3 KVIFFDLDDTLVDT-TKLAELARRNAIENMIRHGLPVDFETAYSELMELIKEYGSNFPHH 61
Query: 64 ----LRAL-------GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQ---RKIIF 109
LR L G YH + ++ P R +L + + R I
Sbjct: 62 FDYLLRRLDLPYNPKWVSAGVIAYHN-----TKFAYLREVPGARKVLIRLRELGYRLGII 116
Query: 110 TNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHV 169
T+ + + RLEI D F+ +I +F + KP K AL
Sbjct: 117 TDGNPVKQWEKILRLEIDDFFEHVII--------------SDFEGVKKPHPKIFKKALKA 162
Query: 170 ANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNVGE-------ADYALENVNNLPQ 221
NVD + AL + D + ++ K +G++TV E ADY +E + +L +
Sbjct: 163 FNVDAQEALMVGDRLYSDIYGAKNVGMKTVWFKYGKYSKEELEYREYADYEIEKLQDLLK 222
Query: 222 VV 223
V+
Sbjct: 223 VI 224
|
Pyrococcus abyssi (strain GE5 / Orsay) (taxid: 272844) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|O59346|Y1655_PYRHO Uncharacterized HAD-hydrolase PH1655 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH1655 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 91/241 (37%), Gaps = 42/241 (17%)
Query: 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-- 63
+ FDLDDTL + A K IE + A S +EL K YGS
Sbjct: 3 KVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHF 62
Query: 64 ---LRAL-------GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFT 110
LR L G YH + ++ P R +L + + I T
Sbjct: 63 DYLLRRLDLPYNPKWISAGVIAYHN-----TKFAYLREVPGARKVLIRLKELGYELGIIT 117
Query: 111 NSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA 170
+ + + RLE+ D F+ +I +F + KP K AL
Sbjct: 118 DGNPVKQWEKILRLELDDFFEHVII--------------SDFEGVKKPHPKIFKKALKAF 163
Query: 171 NVDPRHALFLDDNI-KNVTAGKALGLRTVLV--GKTVN-----VGEADYALENVNNLPQV 222
NV P AL + D + ++ K +G++TV GK ADY ++N+ +L +V
Sbjct: 164 NVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEV 223
Query: 223 V 223
+
Sbjct: 224 L 224
|
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (taxid: 70601) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 256 | ||||||
| 224102047 | 266 | predicted protein [Populus trichocarpa] | 0.992 | 0.954 | 0.759 | 1e-111 | |
| 118484991 | 266 | unknown [Populus trichocarpa] | 0.992 | 0.954 | 0.759 | 1e-111 | |
| 224108057 | 266 | predicted protein [Populus trichocarpa] | 0.992 | 0.954 | 0.759 | 1e-111 | |
| 255551455 | 264 | Protein SSM1, putative [Ricinus communis | 0.992 | 0.962 | 0.746 | 1e-110 | |
| 225432622 | 266 | PREDICTED: phosphate metabolism protein | 0.992 | 0.954 | 0.748 | 1e-107 | |
| 147800883 | 257 | hypothetical protein VITISV_036478 [Viti | 0.960 | 0.957 | 0.747 | 1e-102 | |
| 388507830 | 264 | unknown [Medicago truncatula] | 0.992 | 0.962 | 0.700 | 1e-101 | |
| 357444255 | 264 | Phosphate metabolism protein [Medicago t | 0.992 | 0.962 | 0.700 | 1e-101 | |
| 27528429 | 262 | putative phosphatase [Phaseolus vulgaris | 0.992 | 0.969 | 0.694 | 1e-100 | |
| 351727092 | 261 | uncharacterized protein LOC547648 [Glyci | 0.992 | 0.973 | 0.669 | 8e-98 |
| >gi|224102047|ref|XP_002312525.1| predicted protein [Populus trichocarpa] gi|222852345|gb|EEE89892.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/254 (75%), Positives = 219/254 (86%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
SPF+CL+FDLDDTLY S+ GIA A+++NI+ FL+E+CGFSE KA S+RVELFK YGS+LA
Sbjct: 13 SPFDCLLFDLDDTLYSSKLGIAEALRKNIDDFLVERCGFSEEKAPSIRVELFKTYGSSLA 72
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
GLRALGY I ADDYH FVHGRLPYDLIKPD QL NLL SITQRKIIFTNSDRNHAI LK
Sbjct: 73 GLRALGYGIDADDYHSFVHGRLPYDLIKPDSQLLNLLRSITQRKIIFTNSDRNHAIMALK 132
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDD 182
RL I DCFDQIICFETMNPNLSK++ PDEFPVLLKPSMDAMK+AL VA+VD R LFLDD
Sbjct: 133 RLGIEDCFDQIICFETMNPNLSKSSSPDEFPVLLKPSMDAMKIALRVADVDLRRTLFLDD 192
Query: 183 NIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQSDDGDQRISRTR 242
N++NV AGKALGLRT LVGKTV EADY LE+++NL QV+PEIW +D GDQRISRTR
Sbjct: 193 NVRNVAAGKALGLRTALVGKTVKSKEADYVLEHIHNLAQVIPEIWARGTDSGDQRISRTR 252
Query: 243 SELESILTTTPVGA 256
SE++++LT T VGA
Sbjct: 253 SEMDAVLTATTVGA 266
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118484991|gb|ABK94360.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/254 (75%), Positives = 219/254 (86%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
SPF+CL+FDLDDTLY S+ GIA A+++NI+ FL+E+CGFSE KA S+RVELFK YGS+LA
Sbjct: 13 SPFDCLLFDLDDTLYSSKLGIAEALRKNIDDFLVERCGFSEDKAPSIRVELFKTYGSSLA 72
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
GLRALGY I ADDYH FVHGRLPYDLIKPD QL NLL SITQRKIIFTNSDRNHAI LK
Sbjct: 73 GLRALGYGIDADDYHSFVHGRLPYDLIKPDSQLLNLLRSITQRKIIFTNSDRNHAIMALK 132
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDD 182
RL I DCFDQIICFETMNPNLSK++ PDEFPVLLKPSMDAMK+AL VA+VD R LFLDD
Sbjct: 133 RLGIEDCFDQIICFETMNPNLSKSSSPDEFPVLLKPSMDAMKIALRVADVDLRRTLFLDD 192
Query: 183 NIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQSDDGDQRISRTR 242
N++NV AGKALGLRT LVGKTV EADY LE+++NL QV+PEIW +D GDQRISRTR
Sbjct: 193 NVRNVAAGKALGLRTALVGKTVKSKEADYVLEHIHNLAQVIPEIWARGTDSGDQRISRTR 252
Query: 243 SELESILTTTPVGA 256
SE++++LT T VGA
Sbjct: 253 SEMDAVLTATTVGA 266
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224108057|ref|XP_002314706.1| predicted protein [Populus trichocarpa] gi|222863746|gb|EEF00877.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/254 (75%), Positives = 221/254 (87%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
SPF+CL+FDLDDTLY S+ GIA A+++NI+ FL+EKCGF E KA S RVELFK+YGS+LA
Sbjct: 13 SPFDCLLFDLDDTLYSSKLGIAEALRKNIDEFLVEKCGFPENKAPSHRVELFKSYGSSLA 72
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
GLRALGYDI ADDYH FVHGRLPYDLIKPD QLRNLL SITQRKIIFTNSDRNHAI LK
Sbjct: 73 GLRALGYDIDADDYHSFVHGRLPYDLIKPDSQLRNLLRSITQRKIIFTNSDRNHAIMALK 132
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDD 182
RL I DCFDQIICFETMNPNLSK+T PDEFPVLLKPS+DAMK+AL VA+VDPR LFLDD
Sbjct: 133 RLGIEDCFDQIICFETMNPNLSKSTSPDEFPVLLKPSVDAMKVALRVADVDPRRTLFLDD 192
Query: 183 NIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQSDDGDQRISRTR 242
N++NV AGKALGLRT LVGKTV EADY LE+++NL +V+PEIWV ++ GD+RISR R
Sbjct: 193 NVRNVAAGKALGLRTALVGKTVTSKEADYVLEHIHNLAEVIPEIWVGGTESGDRRISRPR 252
Query: 243 SELESILTTTPVGA 256
SE+++IL+ T VGA
Sbjct: 253 SEMDAILSPTTVGA 266
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255551455|ref|XP_002516773.1| Protein SSM1, putative [Ricinus communis] gi|223543861|gb|EEF45387.1| Protein SSM1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/256 (74%), Positives = 221/256 (86%), Gaps = 2/256 (0%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
SPF+CL+FDLDDTLY S+ GIA A+++NI+ FL+EKCGF++ KASSLRVELFK YGS+LA
Sbjct: 9 SPFDCLIFDLDDTLYSSKLGIAEALRKNIDDFLVEKCGFAQDKASSLRVELFKTYGSSLA 68
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
GLRALGYDI ADDYH FVHGRLPYDLIKPD QLRN+L SI QRK+IFTNSDRNHA+ L+
Sbjct: 69 GLRALGYDIDADDYHSFVHGRLPYDLIKPDGQLRNILLSIPQRKLIFTNSDRNHAMKSLE 128
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDD 182
RL I DCFDQIICFETMNPNLS++TRPDEFPVLLKPS+DAMK+ALHVA+++P LFLDD
Sbjct: 129 RLGIEDCFDQIICFETMNPNLSRSTRPDEFPVLLKPSIDAMKIALHVADINPSRTLFLDD 188
Query: 183 NIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQSDDG--DQRISR 240
N++NV AGKA+GL TVLVGKTV EADY LE V LPQV+PEIW+S D G +RISR
Sbjct: 189 NVRNVAAGKAMGLSTVLVGKTVKSKEADYLLEYVIKLPQVIPEIWMSGEDSGGDGRRISR 248
Query: 241 TRSELESILTTTPVGA 256
TRSE++SIL TPVGA
Sbjct: 249 TRSEMDSILAPTPVGA 264
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432622|ref|XP_002281854.1| PREDICTED: phosphate metabolism protein 8 [Vitis vinifera] gi|297737030|emb|CBI26231.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/254 (74%), Positives = 213/254 (83%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
SPF+CLVFDLDDTLY S+TGI+ A KRNIE FL++KCGF ETKASSLRVELFK YGSTLA
Sbjct: 13 SPFDCLVFDLDDTLYHSKTGISEACKRNIEEFLVQKCGFGETKASSLRVELFKNYGSTLA 72
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
GLRALGY+I ADDYH FVHGRLPY+LIKPD QLR+LL SI RKII TNSDRNHAI L
Sbjct: 73 GLRALGYNIDADDYHSFVHGRLPYELIKPDSQLRSLLRSIALRKIILTNSDRNHAIKVLD 132
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDD 182
RL + DCFDQIICFETMNPNL K+TR DEFPV+LKPS+DAMK+AL ANV+P LFLDD
Sbjct: 133 RLGLQDCFDQIICFETMNPNLPKSTRLDEFPVILKPSLDAMKIALDAANVNPPRTLFLDD 192
Query: 183 NIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQSDDGDQRISRTR 242
N++N+ AGKALGLRTVLVGKT+ EADY LE V+NL QV+PEIW+ D DQRI RT
Sbjct: 193 NVRNIAAGKALGLRTVLVGKTMKTKEADYVLETVHNLAQVIPEIWLGGKDGEDQRIKRTG 252
Query: 243 SELESILTTTPVGA 256
SEL++ L TTPVGA
Sbjct: 253 SELDATLPTTPVGA 266
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147800883|emb|CAN62374.1| hypothetical protein VITISV_036478 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/246 (74%), Positives = 205/246 (83%)
Query: 11 DLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYD 70
DLDDTLY S+TGIA A KRNIE FL++KCGF ETKASSLRVELFK YGSTLAGLRALGY+
Sbjct: 12 DLDDTLYHSKTGIAEACKRNIEEFLVQKCGFGETKASSLRVELFKNYGSTLAGLRALGYN 71
Query: 71 IGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCF 130
I ADDYH FVHGRLPY+LIKPD QLR+LL SI RKII TNSDRNHAI L RL + DCF
Sbjct: 72 IDADDYHSFVHGRLPYELIKPDSQLRSLLRSIALRKIILTNSDRNHAIKVLDRLGLQDCF 131
Query: 131 DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAG 190
DQIICFETMNPNL K+TR DEFPV+LKPS+DAMK+AL ANV+P LFLDDN++N+ AG
Sbjct: 132 DQIICFETMNPNLPKSTRLDEFPVILKPSLDAMKIALDAANVNPPRTLFLDDNVRNIAAG 191
Query: 191 KALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQSDDGDQRISRTRSELESILT 250
KALGLRTVLVGKT+ EADY LE V+NL QV+PEIW+ D DQRI RT SEL++ L
Sbjct: 192 KALGLRTVLVGKTMKTKEADYVLETVHNLAQVIPEIWLGGKDGEDQRIKRTGSELDATLP 251
Query: 251 TTPVGA 256
TTPVGA
Sbjct: 252 TTPVGA 257
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388507830|gb|AFK41981.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/257 (70%), Positives = 217/257 (84%), Gaps = 3/257 (1%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
SPF+C++FDLDDTLYPS TGI AAVK+NI+ FL+EKCGFS++KAS+LRVELFK++GSTLA
Sbjct: 8 SPFDCIIFDLDDTLYPSNTGIGAAVKKNIDLFLMEKCGFSQSKASTLRVELFKSHGSTLA 67
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
GLRALGYDI A++YHGFVHGRLPY+LIKPD QLRNLL SI QRKIIFTNSDR HA+ L
Sbjct: 68 GLRALGYDITAEEYHGFVHGRLPYELIKPDIQLRNLLRSINQRKIIFTNSDRIHALRALD 127
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDD 182
RL I DCF+QIICFET+NPNL +TRPDEFPVLLKPS DA K+A+ ANVDPRH LFLDD
Sbjct: 128 RLGITDCFEQIICFETLNPNLPNSTRPDEFPVLLKPSPDAFKIAIQAANVDPRHTLFLDD 187
Query: 183 NIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNN--LPQVVPEIWVSQSDDGDQRISR 240
+++N+ AGK +GL TVLVG+TV DY +E VN+ L +V+PEIW S+ DD DQ++SR
Sbjct: 188 SVRNIIAGKEMGLHTVLVGETVKNNVGDYVVECVNSVTLAEVIPEIWGSRVDDYDQKLSR 247
Query: 241 TRSELESILTT-TPVGA 256
T SEL+++L+ T VGA
Sbjct: 248 TNSELDALLSAYTAVGA 264
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357444255|ref|XP_003592405.1| Phosphate metabolism protein [Medicago truncatula] gi|217073866|gb|ACJ85293.1| unknown [Medicago truncatula] gi|355481453|gb|AES62656.1| Phosphate metabolism protein [Medicago truncatula] gi|388519543|gb|AFK47833.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/257 (70%), Positives = 217/257 (84%), Gaps = 3/257 (1%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
SPF+C++FDLDDTLYPS TGI AAVK+NI+ FL+EKCGFS++KAS+LRVELFK++GSTLA
Sbjct: 8 SPFDCIIFDLDDTLYPSNTGIGAAVKKNIDLFLMEKCGFSQSKASTLRVELFKSHGSTLA 67
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
GLRALGYDI A++YHGFVHGRLPY+LIKPD QLRNLL SI QRKIIFTNSDR HA+ L
Sbjct: 68 GLRALGYDITAEEYHGFVHGRLPYELIKPDIQLRNLLRSINQRKIIFTNSDRIHALRALD 127
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDD 182
RL I DCF+QIICFET+NPNL +TRPDEFPVLLKPS DA K+A+ ANVDPRH LFLDD
Sbjct: 128 RLGITDCFEQIICFETLNPNLPNSTRPDEFPVLLKPSPDAFKIAIQAANVDPRHTLFLDD 187
Query: 183 NIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNN--LPQVVPEIWVSQSDDGDQRISR 240
+++N+ AGK +GL TVLVG+TV DY +E VN+ L +V+PEIW S+ DD DQ++SR
Sbjct: 188 SVRNIIAGKEMGLHTVLVGETVKNNVGDYVVECVNSVTLAEVIPEIWGSRVDDYDQKLSR 247
Query: 241 TRSELESILTT-TPVGA 256
T SEL+++L+ T VGA
Sbjct: 248 TNSELDALLSAYTAVGA 264
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|27528429|emb|CAD57681.1| putative phosphatase [Phaseolus vulgaris] | Back alignment and taxonomy information |
|---|
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/255 (69%), Positives = 210/255 (82%), Gaps = 1/255 (0%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
SPF+ ++FDLDDTLYPS TGI VKRNIE FLIEKCGFSE+KA+ LRVELFK YGSTLA
Sbjct: 8 SPFDAIIFDLDDTLYPSTTGIDRCVKRNIELFLIEKCGFSESKAAHLRVELFKTYGSTLA 67
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
GLRALGYDI A++YH FVHGRLPYD IKPD QLRNLLC+I QRKI+FTNSDR HA+ L
Sbjct: 68 GLRALGYDITAEEYHSFVHGRLPYDSIKPDVQLRNLLCTIKQRKIVFTNSDRIHAMRALD 127
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDD 182
RL I+DCF+QIICFET+NPNL +TRPDEFPVLLKPS+DA ++AL ANV+PR LFLDD
Sbjct: 128 RLGISDCFEQIICFETINPNLPNSTRPDEFPVLLKPSLDAFRIALDAANVEPRRTLFLDD 187
Query: 183 NIKNVTAGK-ALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQSDDGDQRISRT 241
+++N+ AGK GL+TVLVGKTV EA+YA+E VNN+ Q +PEIW ++ + D+ I+RT
Sbjct: 188 SVRNIAAGKRKWGLQTVLVGKTVKSKEANYAVEFVNNVAQAIPEIWANKMEYKDETITRT 247
Query: 242 RSELESILTTTPVGA 256
+SELES L VGA
Sbjct: 248 KSELESALAIALVGA 262
|
Source: Phaseolus vulgaris Species: Phaseolus vulgaris Genus: Phaseolus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351727092|ref|NP_001235869.1| uncharacterized protein LOC547648 [Glycine max] gi|22218272|gb|AAM94615.1| putative hydrolase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 362 bits (929), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 170/254 (66%), Positives = 207/254 (81%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
SPF+ ++FDLDDTLYPS TGI VK+NI+ FLI+KCGFSE++A +LRV+LFK YGSTLA
Sbjct: 8 SPFDSIIFDLDDTLYPSSTGIDKCVKKNIQLFLIQKCGFSESEAFTLRVDLFKTYGSTLA 67
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
GLRALG+DI A++YHGFVHGRLPYD I PD LRNLLC+I QRKI+FTNSDR HA+ L
Sbjct: 68 GLRALGHDITAEEYHGFVHGRLPYDSINPDHHLRNLLCTIKQRKIVFTNSDRIHAMRSLD 127
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDD 182
RL I DCF+QIICFET+NPNL +TRPDEF +LLKPS+DA K+AL ANVDPR LFLDD
Sbjct: 128 RLGIKDCFEQIICFETINPNLPYSTRPDEFLILLKPSLDAFKIALDAANVDPRRTLFLDD 187
Query: 183 NIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQSDDGDQRISRTR 242
+++N+ AGK +GL TVLVGKT ADYA+E VN+L QV+PEIW ++ D DQ ++RT+
Sbjct: 188 SVRNIAAGKEMGLHTVLVGKTEKSKGADYAVECVNDLAQVIPEIWANEMDGEDQTMTRTK 247
Query: 243 SELESILTTTPVGA 256
SELE++L VGA
Sbjct: 248 SELEAVLACAVVGA 261
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 256 | ||||||
| TAIR|locus:2045422 | 263 | AT2G32150 [Arabidopsis thalian | 1.0 | 0.973 | 0.631 | 1.6e-86 | |
| TAIR|locus:2185223 | 280 | AT5G02230 [Arabidopsis thalian | 0.531 | 0.485 | 0.566 | 2.6e-61 | |
| TAIR|locus:2079522 | 249 | AT3G62040 [Arabidopsis thalian | 0.875 | 0.899 | 0.469 | 4.5e-59 | |
| TAIR|locus:2148358 | 266 | AT5G59490 [Arabidopsis thalian | 0.882 | 0.849 | 0.450 | 1.6e-54 | |
| TAIR|locus:2148343 | 282 | AT5G59480 [Arabidopsis thalian | 0.648 | 0.588 | 0.459 | 3.3e-40 | |
| DICTYBASE|DDB_G0293862 | 249 | DDB_G0293862 "haloacid dehalog | 0.820 | 0.843 | 0.339 | 5.9e-25 | |
| SGD|S000003192 | 280 | SDT1 "Pyrimidine nucleotidase" | 0.808 | 0.739 | 0.323 | 1.9e-19 | |
| SGD|S000000839 | 321 | PHM8 "Lysophosphatidic acid (L | 0.757 | 0.604 | 0.304 | 7.5e-18 | |
| UNIPROTKB|G4MVR5 | 238 | MGG_01783 "Uncharacterized pro | 0.828 | 0.890 | 0.304 | 8.6e-17 | |
| POMBASE|SPAC24B11.05 | 226 | SPAC24B11.05 "pyrimidine 5'-nu | 0.808 | 0.915 | 0.298 | 2.3e-14 |
| TAIR|locus:2045422 AT2G32150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 166/263 (63%), Positives = 206/263 (78%)
Query: 1 MD-SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS 59
MD SP NCL+FDLDDTLYP +TGIA AVK+NI+ FL+EK GFSE+KASSLRVELFK YGS
Sbjct: 1 MDFSPINCLIFDLDDTLYPLKTGIAPAVKKNIDDFLVEKFGFSESKASSLRVELFKTYGS 60
Query: 60 TLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAIT 119
TLAGLRALG+D+ D+YH FVHGRLPY I+P+ +LRNLL I QRKIIFTNSD+NHA+
Sbjct: 61 TLAGLRALGHDVHPDEYHSFVHGRLPYGSIEPNNKLRNLLNKIKQRKIIFTNSDKNHAVK 120
Query: 120 CLKRLEIADCFDQIICFETMNPNL-SKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAL 178
LK+L + DCF+++ICFETMNPNL TRPDE+PV+LKPS+ AM + + VANVDPR +
Sbjct: 121 VLKKLGLEDCFEEMICFETMNPNLFGSTTRPDEYPVVLKPSLTAMDICIRVANVDPRRTV 180
Query: 179 FLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQS-----DD 233
FLDDNI N+TAGK++GLRT+LVG+ +ADYA+E V + VPEIW + + D
Sbjct: 181 FLDDNIHNITAGKSVGLRTILVGRAEKTKDADYAVETVTEIATAVPEIWATATATGGFDV 240
Query: 234 GDQRISRTRSELESILTTTPVGA 256
G +RI R++SELE + + VGA
Sbjct: 241 GGERIRRSKSELEGMASIAAVGA 263
|
|
| TAIR|locus:2185223 AT5G02230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 411 (149.7 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 77/136 (56%), Positives = 99/136 (72%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL 64
++CL+FDLDDTLYP +GIA NI+ ++ EK G + K L L+K YG+T+AGL
Sbjct: 15 YDCLLFDLDDTLYPLSSGIARECGNNIKDYMTEKLGIPKDKIVELSDLLYKNYGTTMAGL 74
Query: 65 RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRL 124
RA+GY+ D+YH FVHGRLPYD IKPD LR+LL S+ RK+IFTN+DR HA LK+L
Sbjct: 75 RAIGYEFDYDEYHSFVHGRLPYDNIKPDLVLRSLLLSLPLRKVIFTNADRVHAAKALKKL 134
Query: 125 EIADCFDQIICFETMN 140
+ DCF+ IICFET+N
Sbjct: 135 GLEDCFEGIICFETLN 150
|
|
| TAIR|locus:2079522 AT3G62040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 108/230 (46%), Positives = 162/230 (70%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL 64
+ CL FD+DDTLYP GI A + NI+ F++ + G E++ L ++L+K YG+T+AGL
Sbjct: 8 YECLFFDMDDTLYPLSIGINLACRNNIQEFMLNQLGIEESEVPKLCLDLYKEYGTTMAGL 67
Query: 65 RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRL 124
+ +GY+ D++H +VHGRLPY+ +KPDP LRNLL S+ RKIIFTN+D+ HA L RL
Sbjct: 68 KVMGYEFDNDEFHEYVHGRLPYEKLKPDPLLRNLLLSMPHRKIIFTNADKAHATRALNRL 127
Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVAN-VDPRHALFLDDN 183
+ DCF+ IICFET+NP+ T+ +L KPS++A + A+ +A+ VDPR +F DD+
Sbjct: 128 GLEDCFEGIICFETLNPSSDSNTQ-----ILCKPSVEAFEAAIRIADIVDPRKTIFFDDS 182
Query: 184 IKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQSDD 233
I+N+ + KA GL+TV VG++V V ADYAL +++N+ + +P++W D+
Sbjct: 183 IRNIASAKATGLKTVFVGESVLVPGADYALSSIHNIKEAIPDLWEDNKDE 232
|
|
| TAIR|locus:2148358 AT5G59490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 105/233 (45%), Positives = 157/233 (67%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL 64
+ CL+FDLDDTLYP +G++ A NI +++EK G E L L+K YG+++AGL
Sbjct: 11 YECLLFDLDDTLYPLSSGLSDACSNNIIEYMVEKLGIDEDGVVELNQILYKKYGTSMAGL 70
Query: 65 RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRL 124
+A+GY+ D+YH +VHGRLPY+ +KPDP LR+LL + RK++F+N D H + L RL
Sbjct: 71 KAVGYEFDNDEYHRYVHGRLPYENLKPDPVLRSLLLGLPLRKLVFSNGDEVHVMKALTRL 130
Query: 125 EIADCFDQIICFETMNPNLSKATRP------DEFPVLLKPSMDAMKLALHVANVDPRHAL 178
I DCF++II FET+NP++++A E PV+ KP+ A + A +A ++P L
Sbjct: 131 GIEDCFERIISFETLNPDINEAELSCVTGHLPENPVICKPTEIAFEKAFDIAQLNPHKTL 190
Query: 179 FLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQS 231
F DD+ +N+ GKA+GL TVLVGK+ + +DYALE+++N+ + PE+W S+S
Sbjct: 191 FFDDSTRNIQTGKAVGLHTVLVGKSEKIDGSDYALESIHNMKEAFPELW-SES 242
|
|
| TAIR|locus:2148343 AT5G59480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 79/172 (45%), Positives = 120/172 (69%)
Query: 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL 61
++ ++CL+FD+DDTLYP +G+A VK+NI+ ++++K G E K L + L+K YG+T+
Sbjct: 12 EAKYDCLLFDIDDTLYPLSSGLAMEVKKNIQEYMVQKLGIEEDKVQELCLSLYKIYGTTM 71
Query: 62 AGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCL 121
AGL+A+GYD DD+H FVHGRLPY +KPDP LRN++ S+ RK++FTN+D+ HA +
Sbjct: 72 AGLKAVGYDFDYDDFHRFVHGRLPYSTLKPDPILRNIILSLPIRKVVFTNADKAHAAKII 131
Query: 122 KRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD 173
RL + CF++II FET+NP ++K E PV K + + + ++AN D
Sbjct: 132 ARLGLEGCFEKIISFETLNP-ITKT----ESPVDTK-TREIFDIISYMANPD 177
|
|
| DICTYBASE|DDB_G0293862 DDB_G0293862 "haloacid dehalogenase-like hydrolase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 77/227 (33%), Positives = 114/227 (50%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
L+FDLD+TLYP G+AA V I ++ + +R +K YG TL GL +
Sbjct: 24 LLFDLDNTLYPKSCGLAAQVSNRITQYMSIILNLPMEEVDKVRNHYYKTYGLTLKGLM-M 82
Query: 68 GYDIGADDYHGFVHGRLPYDL-IKPDPQLRNLLCSITQ--RKIIFTNSDRNHAITCLKRL 124
+++ D Y +VHG L +KPD +L L S+ +K+IF+N+D H + L
Sbjct: 83 NHEVNIDKYLDYVHGGLDLKSHLKPDARLHACLKSVKSGVKKVIFSNADIGHCKRVTREL 142
Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184
EI DCFD + + M + SK P PV + AMK A D +F DD +
Sbjct: 143 EIDDCFDAWLDYLEMM-DFSK---PH--PVAYQM---AMKKA---DTTDASGCVFFDDVV 190
Query: 185 KNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQS 231
+N+ K G+ TVLVG T N DY ++ ++ + PE+ + QS
Sbjct: 191 ENLVEAKKAGMYTVLVGATSNDPHVDYCIDEIHEFVNIFPEL-IDQS 236
|
|
| SGD|S000003192 SDT1 "Pyrimidine nucleotidase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 75/232 (32%), Positives = 119/232 (51%)
Query: 10 FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGY 69
FD+D+ LY S T I ++++I F S A L +K YG + GL + +
Sbjct: 60 FDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFH 118
Query: 70 DIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQR-KI----IFTNSDRNHAITCLKR 123
+ A +Y+ V LP D++KPD LRN+L + Q KI +FTN+ +NHAI CL+
Sbjct: 119 KVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL 178
Query: 124 LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP-RHALFLDD 182
L IAD FD + + +R D ++ KP + A + A+ + + +A F+DD
Sbjct: 179 LGIADLFDGLTYCDY--------SRTDT--LVCKPHVKAFEKAMKESGLARYENAYFIDD 228
Query: 183 NIKNVTAGKALGLRTV--LVGKTVN--VG---EADYALENVNNLPQVVPEIW 227
+ KN+ G LG++T LV VN +G E + ++ LP VV +++
Sbjct: 229 SGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF 280
|
|
| SGD|S000000839 PHM8 "Lysophosphatidic acid (LPA) phosphatase involved in LPA hydrolysis" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 66/217 (30%), Positives = 107/217 (49%)
Query: 10 FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGY 69
FD+D+TLY T + +++++ F + GF + +A L ++ YG ++ GL
Sbjct: 57 FDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIKNKQ 116
Query: 70 DIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQRKI-------IFTNSDRNHAITCL 121
Y+ F+ LP D +KPD +LR LL ++ ++K+ +FTNS +NHAI C+
Sbjct: 117 IDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAIRCV 176
Query: 122 KRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP-RHALFL 180
K L IAD FD I RP E + KP + A + + +A F+
Sbjct: 177 KILGIADLFDGI--------TYCHYDRPIEEEFICKPDPKFFETAKLQSGLSSFANAWFI 228
Query: 181 DDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVN 217
DDN NV + ++G+ G +++ E DY E+ N
Sbjct: 229 DDNESNVRSALSMGM-----GHVIHLIE-DYQYESEN 259
|
|
| UNIPROTKB|G4MVR5 MGG_01783 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 71/233 (30%), Positives = 110/233 (47%)
Query: 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG 63
P FD+D+ LYP + + I+ + E S +A L E ++ YG + G
Sbjct: 15 PTKIFFFDIDNCLYPKSAKVHDRMADLIDKYFAEHLSLSWDEAVRLHKEYYQNYGLAIEG 74
Query: 64 LRALGYDIGADDYHGFVHGRLPYD-LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAIT 119
L + I +Y+ V LP + +IKP+PQLR +L I + K+ +FTN+ NHA
Sbjct: 75 L-VRHHQIDPLEYNSKVDDALPLEGIIKPNPQLRKMLEDIDRSKVKLWLFTNAYVNHARR 133
Query: 120 CLKRLEIADCFDQII-CFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAL 178
++ LEI D FD I C P + K D F +AM+ A V NVD +
Sbjct: 134 VVRLLEIEDLFDGITYCDYAAQPLVCKP-HEDAFA-------NAMRDA-GVENVDDCY-- 182
Query: 179 FLDDNIKNVTAGKALGLRTV-LVGKTVNVGE---ADYALENVNNLPQVVPEIW 227
F+DDN +N +G T LV + V V + + + ++ L V P+++
Sbjct: 183 FVDDNYQNCRKANEIGWHTAHLVEEGVKVPRTPASKHQIRSLEELRNVFPDVF 235
|
|
| POMBASE|SPAC24B11.05 SPAC24B11.05 "pyrimidine 5'-nucleotidase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 68/228 (29%), Positives = 106/228 (46%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
+ FDLD+ LYP I + I F +K G +A LR ++ YG + GL L
Sbjct: 8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66
Query: 68 GYDIGADDYHGFVHGRLPYD-LIKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRL 124
++I A DY V LP + +IK D LR +L + ++ K IFTN+ HA LK L
Sbjct: 67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126
Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANV-DPRHALFLDDN 183
I DCFD I + +L + KP + + + A V D +F+DD+
Sbjct: 127 GIEDCFDGITYCDYNAKDL-----------IAKPMPEMYERVMREAGVTDKDKCIFVDDS 175
Query: 184 IKNVTAGKALGLR-TV-LV--GKTVNVGEA-DYALENVNNLPQVVPEI 226
N+ + G + TV LV G + +A + + +++ ++ EI
Sbjct: 176 YGNILGAREFGWKYTVQLVEHGDPLPQPQAGSHVIRDIHKFKHLLDEI 223
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| eugene3.00081423 | SubName- Full=Putative uncharacterized protein; (266 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 256 | |||
| TIGR01993 | 183 | TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti | 5e-84 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 3e-25 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 3e-22 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 1e-19 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 2e-15 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 9e-09 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-07 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 2e-07 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 3e-07 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 2e-05 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 8e-05 | |
| TIGR01449 | 213 | TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas | 2e-04 | |
| PRK09456 | 199 | PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Pro | 2e-04 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 3e-04 | |
| PLN02940 | 382 | PLN02940, PLN02940, riboflavin kinase | 4e-04 | |
| PRK13288 | 214 | PRK13288, PRK13288, pyrophosphatase PpaX; Provisio | 6e-04 | |
| COG0647 | 269 | COG0647, NagD, Predicted sugar phosphatases of the | 0.003 |
| >gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Score = 248 bits (635), Expect = 5e-84
Identities = 100/194 (51%), Positives = 125/194 (64%), Gaps = 12/194 (6%)
Query: 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRA 66
FDLD+TLYP GI + RNI F+ + S +A LR + +K YG+TLAGL
Sbjct: 2 VWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSPEEARVLRKDYYKEYGTTLAGLMI 61
Query: 67 LGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEI 126
L ++I AD+Y +VHGRLPYD +KPDP+LRNLL + RKIIFTN DR HA L+RL I
Sbjct: 62 L-HEIDADEYLRYVHGRLPYDKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALRRLGI 120
Query: 127 ADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKN 186
DCFD I CF+T NP+L L KPS A + AL A VDP A+F DD+ +N
Sbjct: 121 EDCFDGIFCFDTANPDL-----------LPKPSPQAYEKALREAGVDPERAIFFDDSARN 169
Query: 187 VTAGKALGLRTVLV 200
+ AGKALG++TVLV
Sbjct: 170 IAAGKALGMKTVLV 183
|
This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 97.9 bits (244), Expect = 3e-25
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 25/198 (12%)
Query: 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKA-YGSTLAGLR 65
++FDLD L + IA V R + ++ G SE + L + +KA YG T++
Sbjct: 1 AVLFDLDGVLVDTAHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTMSAED 60
Query: 66 ALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQR---KIIFTNSDRNHAITCLK 122
A F +KP P +R LL ++ R + TNS R A +
Sbjct: 61 AQLLY-----KQLFYEALEKE-GLKPLPGVRALLEALRARGKKLALLTNSPRADAKL-VL 113
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDD 182
L + FD +I L KP D AL + P LF+DD
Sbjct: 114 ELGLRALFDVVIDSSD--------------VGLGKPDPDIYLQALKKLGLKPSECLFVDD 159
Query: 183 NIKNVTAGKALGLRTVLV 200
+ + A KA G+ TVLV
Sbjct: 160 SPAGIDAAKAAGMHTVLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 91.1 bits (226), Expect = 3e-22
Identities = 57/237 (24%), Positives = 93/237 (39%), Gaps = 32/237 (13%)
Query: 8 LVFDLDDTLYPSETGIAAAV-----KRNIEGFLIEKCGFS---ETKASSLRVELFKAYGS 59
++FDLD TL ++ AV + + L E + +A LR E YG
Sbjct: 7 ILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYGL 66
Query: 60 TLAGLRALGYDIGADDYHGFVHGRLPY--DLIKPDPQLRNLL--CSITQRKIIFTNSDRN 115
TL L L + D+ V L L+ P+ L + I TN R
Sbjct: 67 TLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKKYKLGILTNGARP 126
Query: 116 HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175
H L++L + D FD + E + + KP + + AL V P
Sbjct: 127 HQERKLRQLGLLDYFDAVFISEDVG--------------VAKPDPEIFEYALEKLGVPPE 172
Query: 176 HALFLDDNIKNVTAG-KALGLRTVLV-----GKTVNVGEADYALENVNNLPQVVPEI 226
ALF+ D+++N G +ALG++TV + + DY + ++ L ++ +
Sbjct: 173 EALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLERL 229
|
Length = 229 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 1e-19
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 23/196 (11%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
++FDLD TL + I A++ E+ G + A LR + LA L
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRD----LAAERLGLDIS-AEELREAGGLPFDEALADLLRE 55
Query: 68 GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQ---RKIIFTNSDRNHAITCLKRL 124
+ I D+ + ++P P + LL + + +I +N R L++L
Sbjct: 56 -HPIDPDEILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKL 114
Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184
+ D FD + + + KP +A + L + P LF+DD+
Sbjct: 115 GLLDLFDAVFTSDDVGAR--------------KPDPEAYERVLERLGLPPEEILFIDDSP 160
Query: 185 KNVTAGKALGLRTVLV 200
+++ A +A G++TV V
Sbjct: 161 EDLEAARAAGIKTVHV 176
|
Length = 176 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 2e-15
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 34/230 (14%)
Query: 10 FDLDDTLYPSETGIAAAVKRNIEGFLIEKCGF-SETKASSLRVELFKAYGSTLAG----- 63
FDLDDTL + G+A +RN LIE +A ++L K YGS
Sbjct: 7 FDLDDTLIDTS-GLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYL 65
Query: 64 LRALGYDIGADDYHGFV--HGRLPYDLIKPDPQLRNLLCSITQ---RKIIFTNSDRNHAI 118
+R L + FV + +L + ++ P +R+ L + + R I T+
Sbjct: 66 IRRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQW 125
Query: 119 TCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAL 178
L+RL + D FD +I T +E V KP AL V P A+
Sbjct: 126 EKLERLGVRDFFDAVI------------TS-EEEGV-EKPHPKIFYAALKRLGVKPEEAV 171
Query: 179 FLDDNI-KNVTAGKALGLRTVLV--GKTVNVGE-----ADYALENVNNLP 220
+ D + K++ K LG++TV + GK+ + + DY + ++ L
Sbjct: 172 MVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLRELL 221
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 9e-09
Identities = 41/197 (20%), Positives = 62/197 (31%), Gaps = 61/197 (30%)
Query: 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRA 66
++FDLD TL SE GIA + + + K L L+
Sbjct: 1 AVLFDLDGTLLDSEPGIAEIEELEL---------YPGVKE-------------ALKELKE 38
Query: 67 LGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEI 126
G + + TN R + L+ L +
Sbjct: 39 KGIKL-----------------------------------ALATNKSRREVLELLEELGL 63
Query: 127 ADCFDQIICFET---MNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDN 183
D FD +I P F + KP+ D + AL + VDP L + D+
Sbjct: 64 DDYFDPVITSNGAAIYYPKEGLFLGGGPF-DIGKPNPDKLLAALKLLGVDPEEVLMVGDS 122
Query: 184 IKNVTAGKALGLRTVLV 200
+ ++ KA G V V
Sbjct: 123 LNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 2e-07
Identities = 43/202 (21%), Positives = 63/202 (31%), Gaps = 27/202 (13%)
Query: 5 FNCLVFDLDDTLYPSETGI---------AAAVKRNIEGFLIEKCGFSETKASSLRVELFK 55
+VFDLD TL E + AAA+ I E + R+ L
Sbjct: 1 IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRA 60
Query: 56 AYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNS 112
G L V G + P R L + + I I T
Sbjct: 61 LAGEELLEELLRAGATVVAVLDLVVLGLI-ALTDPLYPGAREALKELKEAGIKLAILTGD 119
Query: 113 DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANV 172
+R A + L + FD ++ + + KP +LAL V
Sbjct: 120 NRLTANAIARLLGL---FDALVSADLYG-----------LVGVGKPDPKIFELALEELGV 165
Query: 173 DPRHALFLDDNIKNVTAGKALG 194
P L + D + ++ A KA G
Sbjct: 166 KPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 2e-07
Identities = 50/233 (21%), Positives = 80/233 (34%), Gaps = 37/233 (15%)
Query: 9 VFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALG 68
+FDLD TL S I A + + G + G R LG
Sbjct: 8 LFDLDGTLVDSAEDILRAFNA-----ALAELGL--PPLDEEEIRQLIGLGLDELIERLLG 60
Query: 69 YDIGADD-------YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAI 118
F+ + P ++ LL ++ I TN
Sbjct: 61 EADEEAAAELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELD 120
Query: 119 TCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAL 178
LK L +AD FD I+ + D P KP + + L L +DP AL
Sbjct: 121 ILLKALGLADYFDVIVGGD------------DVPPP--KPDPEPLLLLLEKLGLDPEEAL 166
Query: 179 FLDDNIKNVTAGKALGLRTVLV------GKTVNVGEADYALENVNNLPQVVPE 225
+ D++ ++ A KA G+ V V + + AD ++++ L ++ E
Sbjct: 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLAE 219
|
Length = 220 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 3e-07
Identities = 47/216 (21%), Positives = 76/216 (35%), Gaps = 26/216 (12%)
Query: 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG 63
++FD+D TL SE A A +++ G + +
Sbjct: 1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDEEIRELHGGGIARIIDLL 55
Query: 64 LRALGYDIGADDYHG----FVHGRLPYDLIKPDPQLRNLLCSITQRKIIF---TNSDRNH 116
+ + AD + L + +KP P + LL + R I ++S R
Sbjct: 56 RKLAAGEDPADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRA 115
Query: 117 AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRH 176
A L RL + D FD I+ + + KP+ D LA VDP
Sbjct: 116 AERVLARLGLLDYFDVIVTADDV--------------ARGKPAPDIYLLAAERLGVDPEE 161
Query: 177 ALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYA 212
+ ++D+ + A KA G+R V V + D
Sbjct: 162 CVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPL 197
|
Length = 221 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 2e-05
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200
KP+ ++ AL VDP + + D+ ++ A +A G+RT+LV
Sbjct: 4 KPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILV 47
|
Length = 74 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 8e-05
Identities = 51/239 (21%), Positives = 82/239 (34%), Gaps = 49/239 (20%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSL-----RVELFKAYGSTLA 62
+ FDLD TL S +AAAV + E + + V L +
Sbjct: 9 VAFDLDGTLVDSAPDLAAAVNAALAAL--GLPPAGEERVRTWVGNGADV-LVE------- 58
Query: 63 GLRALGYDIGADDYHGFVHGRLPYD---------LIKPDPQLRNLLCSITQRKIIF---T 110
RAL + D R +D + P ++ L ++ T
Sbjct: 59 --RALTWAGREPDEELLEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVT 116
Query: 111 NSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA 170
N L+ L IAD F +I D P KP + LA
Sbjct: 117 NKPTPFVAPLLEALGIADYFSVVIG-------------GDSLPNK-KPDPAPLLLACEKL 162
Query: 171 NVDPRHALFLDDNIKNVTAGKALGLRTVLV------GKTVNVGEADYALENVNNLPQVV 223
+DP LF+ D+ ++ A +A G +V V G+ + + E D +++ L ++
Sbjct: 163 GLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221
|
Length = 226 |
| >gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 2e-04
Identities = 55/225 (24%), Positives = 83/225 (36%), Gaps = 27/225 (12%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGF------LIEKCGFSETKASSLRVELFKAYGSTL 61
++FDLD TL S IAAAV + L GF L + G
Sbjct: 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQEP 60
Query: 62 AGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCL 121
R D ++ V G L + L L R + TN A L
Sbjct: 61 DAQRVAELRKLFDRHYEEVAGELTSVFPGVEATLGALRAKGL-RLGLVTNKPTPLARPLL 119
Query: 122 KRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLD 181
+ L +A F +I +++ A R KP D + LA V P+ +++
Sbjct: 120 ELLGLAKYFSVLIGGDSL------AQR--------KPHPDPLLLAAERLGVAPQQMVYVG 165
Query: 182 DNIKNVTAGKALGLRTVLVGKTVNVGEA------DYALENVNNLP 220
D+ ++ A +A G +VL+ GEA D +++N LP
Sbjct: 166 DSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELP 210
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213 |
| >gnl|CDD|181872 PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200
KP + L A+F DDN N+ A ALG+ ++LV
Sbjct: 141 KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILV 184
|
Length = 199 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 3e-04
Identities = 40/188 (21%), Positives = 66/188 (35%), Gaps = 28/188 (14%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKA-SSLRVELFKAYGSTLAGLRA 66
++FD+D TL + I A + E F + F KA L EL + L
Sbjct: 2 ILFDIDGTLVDIKFAIRRAFAQTFEEFGLNPAAFKRLKALRGLAEELLWRIAT--EALEE 59
Query: 67 LGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEI 126
L IG D ++ G DL+ P + + + I +N L++ +
Sbjct: 60 LQGHIGYDAEEAYIPG--AADLL-PRLKEAGI------KLGIISNGSLRAQKLLLRKHGL 110
Query: 127 ADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKN 186
D F+ I+ + KP + AL V P L + DN+ +
Sbjct: 111 GDYFELILG---------------SDEIGSKPEPEIFLAALESLGVPP-EVLHVGDNLSD 154
Query: 187 VTAGKALG 194
+ + G
Sbjct: 155 IKGARNAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 4e-04
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV----GKTVNVGEADYA 212
KPS D A NV+P + L ++D++ V AGKA G+ + V +T AD
Sbjct: 150 KPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSAD-- 207
Query: 213 LENVNNLPQVVPEIW 227
E +N+L + PE W
Sbjct: 208 -EVINSLLDLQPEKW 221
|
Length = 382 |
| >gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 6e-04
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 20/122 (16%)
Query: 108 IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLAL 167
I T R+ LK + + FD +I + + + +PD PVL AL
Sbjct: 103 IVTTKMRDTVEMGLKLTGLDEFFDVVITLDDV-----EHAKPDPEPVLK---------AL 148
Query: 168 HVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEA------DYALENVNNLPQ 221
+ P AL + DN ++ AGK G +T V T+ E D+ L+ +++L
Sbjct: 149 ELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLA 208
Query: 222 VV 223
+V
Sbjct: 209 IV 210
|
Length = 214 |
| >gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.003
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Query: 157 KPSMDAMKLALHVANVDPRHALFLDDNIKN-VTAGKALGLRTVLV--GKTVNVGEADYAL 213
KPS + AL +D L + D + + KA GL T+LV G + + L
Sbjct: 190 KPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVS-----SAEDL 244
Query: 214 ENVNNLPQVVPE 225
+ P V +
Sbjct: 245 DRAEVKPTYVVD 256
|
Length = 269 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 256 | |||
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.97 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.97 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.97 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.97 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.97 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.97 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.97 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.96 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.96 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.96 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.96 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.96 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.96 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.96 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.96 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.96 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.96 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.95 | |
| PLN02940 | 382 | riboflavin kinase | 99.95 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.95 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.95 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.95 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.95 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.94 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.94 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.94 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.94 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.93 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.93 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.93 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.93 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.91 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.91 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.91 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.9 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.9 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.9 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.89 | |
| PLN02811 | 220 | hydrolase | 99.89 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.89 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.88 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.87 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.86 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.86 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.86 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.85 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.85 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.85 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.84 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.84 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.82 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.82 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.82 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.81 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.8 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.79 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.78 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.77 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.75 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.75 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.74 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.74 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.74 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.71 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.7 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.69 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.69 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.68 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.67 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.65 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.65 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.63 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.63 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.63 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.62 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.62 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.6 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.6 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.59 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.57 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.55 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.54 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.53 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.49 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.49 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.47 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.47 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.46 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.46 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.42 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 99.41 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.41 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.39 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.38 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.36 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.36 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.35 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.32 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 99.32 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.31 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.29 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.28 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.26 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.24 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.23 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.23 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.21 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.21 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.2 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.19 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.18 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.17 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.17 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.16 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.16 | |
| PLN02887 | 580 | hydrolase family protein | 99.14 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.06 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.0 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 99.0 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.97 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.96 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.93 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.91 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.86 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.84 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.84 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.82 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.8 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.74 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.74 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.69 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.62 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.62 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.59 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.56 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.55 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.53 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.48 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.47 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.47 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 98.44 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.4 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.37 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.37 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 98.36 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 98.33 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 98.32 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 98.25 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.23 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.19 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 98.18 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 98.07 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.06 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.05 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.02 | |
| PLN02423 | 245 | phosphomannomutase | 97.97 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.95 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.91 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 97.85 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 97.83 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.81 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.77 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 97.77 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.71 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.69 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.68 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.67 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.66 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.65 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.62 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 97.61 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.6 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.59 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.57 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.54 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.52 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.34 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.3 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 97.27 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 97.03 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.03 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 96.89 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 96.88 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 96.79 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.78 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 96.7 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.68 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 96.63 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 96.53 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 96.5 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.46 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.23 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 96.05 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.01 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 96.01 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 95.97 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 95.96 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 95.71 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 95.52 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.5 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 95.44 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 95.16 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 93.74 | |
| PLN02151 | 354 | trehalose-phosphatase | 93.72 | |
| PLN03017 | 366 | trehalose-phosphatase | 93.71 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 93.57 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 93.36 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 93.2 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 92.7 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 91.67 | |
| PLN02580 | 384 | trehalose-phosphatase | 91.65 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 91.09 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 90.57 | |
| PLN02151 | 354 | trehalose-phosphatase | 90.53 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 90.06 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 88.59 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 88.48 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 88.33 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 87.7 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 87.32 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 86.37 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 86.21 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 85.35 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 84.36 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 81.69 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 81.69 | |
| PLN03017 | 366 | trehalose-phosphatase | 81.67 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 81.28 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 80.77 | |
| PF06014 | 62 | DUF910: Bacterial protein of unknown function (DUF | 80.34 |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-30 Score=194.10 Aligned_cols=221 Identities=51% Similarity=0.900 Sum_probs=206.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhc
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHG 82 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (256)
.++++++||+|.||+.....+..+.++.+.+|+.+++|++...+..+...+++.||.....+...+...+.++++++++.
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~ 92 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHG 92 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhc
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHHhhhcC-cEEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHH
Q 025190 83 RLPYDLIKPDPQLRNLLCSITQR-KIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 83 ~~~~~~~~~~pg~~~~l~~l~~~-~~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
.+.++.++|.+-.+.+|-.|+++ .++.||+...++.++|+++|+.+.|+.|++.+...+ .+-...+||.+.
T Consensus 93 ~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np--------~~~~~vcKP~~~ 164 (244)
T KOG3109|consen 93 RLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNP--------IEKTVVCKPSEE 164 (244)
T ss_pred cCcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCC--------CCCceeecCCHH
Confidence 99999999999999999999999 569999999999999999999999999999877654 256778999999
Q ss_pred HHHHHHHHcCCC-CCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHHhcCC
Q 025190 162 AMKLALHVANVD-PRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQS 231 (256)
Q Consensus 162 ~~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~ 231 (256)
+|+.+.+..|++ |.++++++||.++|..|++.|+++++++.......+++++.+..+..+.++.+|....
T Consensus 165 afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~~ 235 (244)
T KOG3109|consen 165 AFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEILE 235 (244)
T ss_pred HHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecccchHHHHHHhhchhhhchHHhhccc
Confidence 999999999997 9999999999999999999999999999988888899999999999888999887765
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=205.73 Aligned_cols=197 Identities=21% Similarity=0.315 Sum_probs=148.1
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHH-HHHcCCCCChhhHhhhhhc
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRALGYDIGADDYHGFVHG 82 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 82 (256)
++|+|+||+||||+|+...+..++..+ .++++......+. +...+|..... +..+. ....+.+...+..
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~-----~~~~~~~~~~~~~----~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~ 71 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHT-----LKTYYPNQYKRED----VLPFIGPSLHDTFSKID-ESKVEEMITTYRE 71 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHH-----HHHhCCCCCCHHH----HHHHhCcCHHHHHHhcC-HHHHHHHHHHHHH
Confidence 579999999999999998888888874 4444432111111 22233433222 22221 1112222222211
Q ss_pred ---CCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCC
Q 025190 83 ---RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 83 ---~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
........++||+.++|+.|+++|+ ++||+....++..++.+|+.++|+.++++++... +
T Consensus 72 ~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--------------~ 137 (214)
T PRK13288 72 FNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEH--------------A 137 (214)
T ss_pred HHHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCC--------------C
Confidence 1112456899999999999999886 8999999999999999999999999999888775 7
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHHhHH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQVVP 224 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~~l~ 224 (256)
||+|..+.+++++++++++++++|||+.+|+++|+++|+.++++.++.. ...++++++++.++.+++.
T Consensus 138 Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~ 211 (214)
T PRK13288 138 KPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVG 211 (214)
T ss_pred CCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999976532 3468999999999888764
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-29 Score=192.46 Aligned_cols=184 Identities=53% Similarity=0.895 Sum_probs=148.8
Q ss_pred eEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhcCCC
Q 025190 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLP 85 (256)
Q Consensus 6 k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (256)
++|+||+||||+|+...+..++.+++.++....+|++..........++..+|.....+... .....+.+...+.+...
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP 79 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence 47999999999999999999999887777777889887666555555555556544433222 23455667777665444
Q ss_pred CCCCCCChhHHHHHHhhhcCcEEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 86 YDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
.....++||+.++|+.|+.+-+++||+....++..++.+|+.++|+.++++++.+.. ....||+|++|.+
T Consensus 80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~----------~~~~KP~p~~~~~ 149 (184)
T TIGR01993 80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD----------YLLPKPSPQAYEK 149 (184)
T ss_pred HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc----------cCCCCCCHHHHHH
Confidence 456789999999999999554599999999999999999999999999999887630 0114999999999
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
+++++|++|+++++|||+..|+.+|+++|+++++|
T Consensus 150 ~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 150 ALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred HHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 99999999999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=206.39 Aligned_cols=206 Identities=17% Similarity=0.139 Sum_probs=150.3
Q ss_pred CCCCeEEEEecCCCccCCCcc-HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH---------------HHHH
Q 025190 2 DSPFNCLVFDLDDTLYPSETG-IAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL---------------AGLR 65 (256)
Q Consensus 2 ~~~~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~ 65 (256)
|+++|+|+||+||||+|+... +..++.+ +.+.+|.+..... . ...+|... ....
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~~~-~----~~~~G~~~~~~~~~~~~~~~~~~~~~~ 70 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITLEE-A----RGPMGLGKWDHIRALLKMPRVAARWQA 70 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCHHH-H----HHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence 356899999999999998643 3567776 4455666432211 1 11111110 0112
Q ss_pred HcCCCCChhhH---hhhh----hcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc-ceeE
Q 025190 66 ALGYDIGADDY---HGFV----HGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQII 134 (256)
Q Consensus 66 ~~~~~~~~~~~---~~~~----~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f-~~i~ 134 (256)
.++.....+.+ ...+ .+.+ .....++||+.++|+.|+++|+ |+||+....+...++.+++..+| +.++
T Consensus 71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~ 149 (267)
T PRK13478 71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV 149 (267)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence 23332222222 1111 1111 2456899999999999999986 99999999999999999988875 8899
Q ss_pred ecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccccHHHHHcCCeEEEEcCCCC--------
Q 025190 135 CFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD-PRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-------- 205 (256)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-------- 205 (256)
++++... .||+|+.|..+++++|+. +++|++|||+.+|+.+|+++|+.+|++.++..
T Consensus 150 ~~~~~~~--------------~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~ 215 (267)
T PRK13478 150 TTDDVPA--------------GRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEE 215 (267)
T ss_pred cCCcCCC--------------CCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHH
Confidence 9888775 799999999999999996 69999999999999999999999999986642
Q ss_pred ---------------------CCCCCeeeCCcCchHHhHHHHHhcCCC
Q 025190 206 ---------------------VGEADYALENVNNLPQVVPEIWVSQSD 232 (256)
Q Consensus 206 ---------------------~~~~~~~~~~~~el~~~l~~~~~~~~~ 232 (256)
...++++++++.+|.+++..+......
T Consensus 216 ~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~~~ 263 (267)
T PRK13478 216 YQALSAAELAARRERARARLRAAGAHYVIDTIADLPAVIADIEARLAR 263 (267)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHHHhc
Confidence 356999999999999988776554433
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=205.02 Aligned_cols=193 Identities=22% Similarity=0.277 Sum_probs=144.0
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCC----CHHHHHHHHHHHHHHhhhhHH-HHHHcCC-CCC--h-
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGF----SETKASSLRVELFKAYGSTLA-GLRALGY-DIG--A- 73 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~--~- 73 (256)
.++|+|+||+||||+|+...+..++.++ .+++|. +.... ... ....|.... .+..+.. ... .
T Consensus 20 ~~~k~viFDlDGTLiDs~~~~~~a~~~~-----~~~~g~~~g~~~~~~-~~~---~~~~G~~~~~~~~~~~~~~~~~~~~ 90 (248)
T PLN02770 20 APLEAVLFDVDGTLCDSDPLHYYAFREM-----LQEINFNGGVPITEE-FFV---ENIAGKHNEDIALGLFPDDLERGLK 90 (248)
T ss_pred CccCEEEEcCCCccCcCHHHHHHHHHHH-----HHHhccccCCCCCHH-HHH---HHcCCCCHHHHHHHHcCcchhhHHH
Confidence 4679999999999999999888888874 444432 22111 100 011222111 1111111 000 0
Q ss_pred --hhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCC
Q 025190 74 --DDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR 148 (256)
Q Consensus 74 --~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~ 148 (256)
..+...+.+.. .....++||+.++|+.|+++|+ |+||+....++..++++|+.++|+.+++++++..
T Consensus 91 ~~~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~------- 162 (248)
T PLN02770 91 FTDDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH------- 162 (248)
T ss_pred HHHHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC-------
Confidence 11122222211 2457899999999999999986 9999999999999999999999999999999876
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-----CCCCCCeeeCCcCch
Q 025190 149 PDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-----NVGEADYALENVNNL 219 (256)
Q Consensus 149 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-----~~~~~~~~~~~~~el 219 (256)
.||+|+.|..++++++++|++|++|||+.+|+++|+++|+.++++.++. ....++++++++.++
T Consensus 163 -------~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 163 -------AKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred -------CCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence 7999999999999999999999999999999999999999999997653 235799999999984
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=202.33 Aligned_cols=196 Identities=18% Similarity=0.167 Sum_probs=147.2
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHH-HHcCCCCCh-------hh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-RALGYDIGA-------DD 75 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~ 75 (256)
|+|+|+||+||||+|+...+..++.. +.+++|.+....+.... ..|...... ......... +.
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQLRP----VVSKGARAMLAVAFPELDAAARDALIPE 81 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----HhhhHHHHHHHHHhccCChHHHHHHHHH
Confidence 56999999999999999888888887 55677765332222211 122222111 111111121 12
Q ss_pred HhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCC
Q 025190 76 YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF 152 (256)
Q Consensus 76 ~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (256)
+...+.... .....++||+.++|+.|+++|+ ++||+....++..++++|+.++|+.++++++.+.
T Consensus 82 ~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~----------- 149 (229)
T PRK13226 82 FLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAE----------- 149 (229)
T ss_pred HHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCC-----------
Confidence 223332222 2356899999999999999986 9999999989999999999999999988887665
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-------CCCCCeeeCCcCchHHhH
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-------VGEADYALENVNNLPQVV 223 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-------~~~~~~~~~~~~el~~~l 223 (256)
.||+|+.|.++++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++.+|.+.+
T Consensus 150 ---~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 150 ---RKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred ---CCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 79999999999999999999999999999999999999999999876542 245999999998886654
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=200.20 Aligned_cols=199 Identities=24% Similarity=0.306 Sum_probs=152.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-HHHH-cCCCC------Chh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRA-LGYDI------GAD 74 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~------~~~ 74 (256)
+++++|+||+||||+|+...+..+++. +++.++.+.......+. ..|.... .+.+ .+... ..+
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~ig~~~~~~~~~~~~~~~~~~~~~~~~ 72 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNA-----ALAELGLPPLDEEEIRQ----LIGLGLDELIERLLGEADEEAAAELVE 72 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHH-----HHHHcCCCCCCHHHHHH----HhcCCHHHHHHHHhccccchhHHHHHH
Confidence 578999999999999999999988886 66778877433333222 1222221 1111 11111 112
Q ss_pred hHhhhhhcCCCCC-CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCC
Q 025190 75 DYHGFVHGRLPYD-LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 75 ~~~~~~~~~~~~~-~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
.++..+.+.+... ...++||+.++|..|+++|+ |+||.....++..++++|+..+|+.++++++...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~--------- 143 (220)
T COG0546 73 RLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPP--------- 143 (220)
T ss_pred HHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCC---------
Confidence 2222333322111 35899999999999999996 9999999999999999999999999999665554
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC------CCCCCCeeeCCcCchHHhHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV------NVGEADYALENVNNLPQVVP 224 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~------~~~~~~~~~~~~~el~~~l~ 224 (256)
.||+|..+..++++++++|++++||||+.+|+++|+++|+.++++.++. ....+++++.++.||...+.
T Consensus 144 -----~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 144 -----PKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred -----CCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 7999999999999999998899999999999999999999999998764 23569999999999987764
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-29 Score=209.16 Aligned_cols=204 Identities=14% Similarity=0.182 Sum_probs=151.0
Q ss_pred CCCCCeEEEEecCCCccCCCc-cHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHH-HHHc-CCCCCh---h
Q 025190 1 MDSPFNCLVFDLDDTLYPSET-GIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRAL-GYDIGA---D 74 (256)
Q Consensus 1 m~~~~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~---~ 74 (256)
|-..+++|+||+||||+|+.. .+..+|.. +.+++|.+....... ....|..... +..+ ....+. +
T Consensus 127 ~~~~~~~VIFDlDGTLIDS~~~i~~~a~~~-----l~~e~G~~~~~~e~~----~~~~G~~~~~~l~~ll~~~~~~~~~e 197 (381)
T PLN02575 127 MGCGWLGAIFEWEGVIIEDNPDLENQAWLT-----LAQEEGKSPPPAFIL----RRVEGMKNEQAISEVLCWSRDPAELR 197 (381)
T ss_pred ccCCCCEEEEcCcCcceeCHHHHHHHHHHH-----HHHHcCCCCCHHHHH----HHhcCCCHHHHHHHHhhccCCHHHHH
Confidence 335789999999999999987 44567776 556778764332211 1223332221 2221 111111 1
Q ss_pred hH----hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCC
Q 025190 75 DY----HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT 147 (256)
Q Consensus 75 ~~----~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 147 (256)
.+ ...+.+.. .....++||+.++|+.|+++|+ |+||+....++..++++|+.++|+.++++++...
T Consensus 198 ~l~~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~------ 270 (381)
T PLN02575 198 RMATRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYR------ 270 (381)
T ss_pred HHHHHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCC------
Confidence 22 22222211 2346789999999999999987 9999999999999999999999999999999875
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC---CCCCCeeeCCcCchHH-hH
Q 025190 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN---VGEADYALENVNNLPQ-VV 223 (256)
Q Consensus 148 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~---~~~~~~~~~~~~el~~-~l 223 (256)
.||+|++|.++++++|++|++|++|||+..|+++|+++|+.+|++..+.. ...++++++++.+|.- .+
T Consensus 271 --------~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l 342 (381)
T PLN02575 271 --------GKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDELSIVDL 342 (381)
T ss_pred --------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999986432 2358999999999854 34
Q ss_pred HHHHh
Q 025190 224 PEIWV 228 (256)
Q Consensus 224 ~~~~~ 228 (256)
+.+..
T Consensus 343 ~~l~~ 347 (381)
T PLN02575 343 KNLAD 347 (381)
T ss_pred hhhhh
Confidence 44443
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-29 Score=198.00 Aligned_cols=198 Identities=26% Similarity=0.362 Sum_probs=141.3
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHH--HHHHHHHHHHHhhh-----hHHHHHHcCCCCChhhHh
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETK--ASSLRVELFKAYGS-----TLAGLRALGYDIGADDYH 77 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 77 (256)
+++|+||+||||+|+...+..++....+. ...+|.+... ...........++. ....+.........+...
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEV--LIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVA 79 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHH--HHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHH
Confidence 68999999999999998887777654332 2345544221 11111111111111 111111122112222111
Q ss_pred hh---hhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 78 GF---VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 78 ~~---~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
.. +... ....+.++||+.++|+.|+++|+ ++||+....++..++++|+.++|+.++++++.+.
T Consensus 80 ~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~---------- 148 (221)
T TIGR02253 80 AFVYAYHKL-KFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGV---------- 148 (221)
T ss_pred HHHHHHHHH-HHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCC----------
Confidence 11 1111 13456899999999999999986 9999999999999999999999999999998886
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC-------CCCCCeeeCCcCch
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN-------VGEADYALENVNNL 219 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~-------~~~~~~~~~~~~el 219 (256)
.||+|..|..+++++|++++++++|||+. +|+.+|+++|+.+|++.++.. ...+++++.++.+|
T Consensus 149 ----~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 149 ----EKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred ----CCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 79999999999999999999999999998 899999999999999986542 23578888888765
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-29 Score=199.13 Aligned_cols=196 Identities=19% Similarity=0.228 Sum_probs=146.5
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-HHH----HcCCCC-ChhhH--
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLR----ALGYDI-GADDY-- 76 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~-~~~~~-- 76 (256)
+|+|+||+||||+|+...+..++.+ +.+++|.+....+.... ..|.... .+. ..+... ..+.+
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQ-----AVTAAGLSPTPEEVQSA----WMGQSKIEAIRALLALDGADEAEAQAAFA 71 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHH-----HHHHcCCCCCHHHHHHh----hcCCCHHHHHHHHHhccCCCHHHHHHHHH
Confidence 5899999999999999999999887 44567775433222110 1222211 111 112211 11112
Q ss_pred --hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc--cccceeEecccCCcccccCCCC
Q 025190 77 --HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA--DCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 77 --~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
...+.+.+......++||+.++|+.|+++|+ ++||+....++..++++|+. ++|+.++++++...
T Consensus 72 ~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~-------- 143 (220)
T TIGR03351 72 DFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAA-------- 143 (220)
T ss_pred HHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCC--------
Confidence 2222222222356899999999999999886 99999999999999999998 99999999998775
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccccHHHHHcCCeE-EEEcCCCC------CCCCCeeeCCcCchHH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVD-PRHALFLDDNIKNVTAGKALGLRT-VLVGKTVN------VGEADYALENVNNLPQ 221 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~G~~~-v~v~~~~~------~~~~~~~~~~~~el~~ 221 (256)
.||+|++|..+++++++. |++|++|||+.+|+++|+++|+.+ +++.++.. ...+++++.++.+|..
T Consensus 144 ------~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~ 217 (220)
T TIGR03351 144 ------GRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPA 217 (220)
T ss_pred ------CCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence 799999999999999997 799999999999999999999999 88876532 3568899999888766
Q ss_pred hH
Q 025190 222 VV 223 (256)
Q Consensus 222 ~l 223 (256)
++
T Consensus 218 ~~ 219 (220)
T TIGR03351 218 LL 219 (220)
T ss_pred hh
Confidence 43
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-29 Score=201.76 Aligned_cols=195 Identities=15% Similarity=0.137 Sum_probs=143.8
Q ss_pred CCeEEEEecCCCccCCCcc-HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH---------------HHHHHc
Q 025190 4 PFNCLVFDLDDTLYPSETG-IAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL---------------AGLRAL 67 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 67 (256)
++|+|+||+||||+|+... +..++.+ ..+++|.+.... .. ....|... .....+
T Consensus 1 ~~k~viFD~DGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~~-~~----~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 70 (253)
T TIGR01422 1 KIEAVIFDWAGTTVDFGSFAPTQAFVE-----AFAEFGVQITLE-EA----RGPMGLGKWDHIRALLKMPAVAERWRAKF 70 (253)
T ss_pred CceEEEEeCCCCeecCCCccHHHHHHH-----HHHHcCCCccHH-HH----HHhcCccHHHHHHHHhcCHHHHHHHHHHh
Confidence 3689999999999998653 4667776 445566643222 11 11111110 011222
Q ss_pred CCCCChhhH---hhhhh----cCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc-ceeEec
Q 025190 68 GYDIGADDY---HGFVH----GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICF 136 (256)
Q Consensus 68 ~~~~~~~~~---~~~~~----~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f-~~i~~~ 136 (256)
+...+.+.+ ...+. +.+ .....++||+.++|+.|+++|+ |+||+....++.+++++|+..+| +.++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~ 149 (253)
T TIGR01422 71 GRLPTEADIEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTT 149 (253)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEcc
Confidence 333333222 12221 111 2457899999999999999986 99999999999999999999986 899999
Q ss_pred ccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----------
Q 025190 137 ETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD-PRHALFLDDNIKNVTAGKALGLRTVLVGKTVN---------- 205 (256)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~---------- 205 (256)
++... .||+|+.|..+++++|+. |++|++|||+.+|+.+|+++|+.+|++.++..
T Consensus 150 ~~~~~--------------~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~ 215 (253)
T TIGR01422 150 DDVPA--------------GRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYR 215 (253)
T ss_pred ccCCC--------------CCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHH
Confidence 88775 799999999999999995 99999999999999999999999999976542
Q ss_pred -------------------CCCCCeeeCCcCchHHhH
Q 025190 206 -------------------VGEADYALENVNNLPQVV 223 (256)
Q Consensus 206 -------------------~~~~~~~~~~~~el~~~l 223 (256)
..+|+++++++.+|..+|
T Consensus 216 ~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 216 ALDPAELEARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred hCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 256999999999987654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=200.47 Aligned_cols=202 Identities=13% Similarity=0.154 Sum_probs=148.9
Q ss_pred CCCeEEEEecCCCccCCCc-cHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-HHHHc-CCCCChh---hH
Q 025190 3 SPFNCLVFDLDDTLYPSET-GIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRAL-GYDIGAD---DY 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~---~~ 76 (256)
+.+|+|+||+||||+|+.. .+..+|.+ +.+++|++....+.. ....|.... .+..+ ....+.+ .+
T Consensus 22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~-----~~~~~G~~~~~~e~~----~~~~G~~~~~~~~~l~~~~~~~~~~~~l 92 (260)
T PLN03243 22 CGWLGVVLEWEGVIVEDDSELERKAWRA-----LAEEEGKRPPPAFLL----KRAEGMKNEQAISEVLCWSRDFLQMKRL 92 (260)
T ss_pred CCceEEEEeCCCceeCCchHHHHHHHHH-----HHHHcCCCCCHHHHH----HHhcCCCHHHHHHHHhccCCCHHHHHHH
Confidence 4679999999999999964 45568887 666778764332211 112332221 11111 1111111 11
Q ss_pred hhhhhc---CCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCC
Q 025190 77 HGFVHG---RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 77 ~~~~~~---~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
...+.. ........++||+.++|+.|+++|+ |+||+....++..++++|+.++|+.+++++++..
T Consensus 93 ~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~--------- 163 (260)
T PLN03243 93 AIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYR--------- 163 (260)
T ss_pred HHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCC---------
Confidence 111111 1112356789999999999999987 9999999999999999999999999999998875
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC---CCCCCCeeeCCcCchHHhHHHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV---NVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~---~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+||+|++|..+++++|+++++|++|||+.+|+++|+++|+.++++.... ....+++++.++.+|....-..+
T Consensus 164 -----~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~ 238 (260)
T PLN03243 164 -----GKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNL 238 (260)
T ss_pred -----CCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhh
Confidence 7999999999999999999999999999999999999999999986322 12358999999999887664444
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-29 Score=197.49 Aligned_cols=195 Identities=19% Similarity=0.221 Sum_probs=146.1
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH----HH-HHcCC-CCChhhH
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA----GL-RALGY-DIGADDY 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~-~~~~~~~ 76 (256)
.++|+|+||+||||+|+...+..++.+ +.+.+|.+........ ...|.... .+ ..... ....+.+
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 75 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREELP----DTLGLRIDQVVDLWYARQPWNGPSRQEV 75 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHHHH----HhhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 478999999999999999888888876 5566776543322211 12221111 11 11111 1122222
Q ss_pred hh----hhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 77 HG----FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 77 ~~----~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
.. .+.+.. .....++||+.++|+.|+++|+ ++||+....++..++.+++..+|+.++++++.+.
T Consensus 76 ~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-------- 146 (222)
T PRK10826 76 VQRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPY-------- 146 (222)
T ss_pred HHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCC--------
Confidence 21 121111 2457899999999999999886 9999999999999999999999999999988765
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC-----CCCCeeeCCcCchHH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV-----GEADYALENVNNLPQ 221 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~-----~~~~~~~~~~~el~~ 221 (256)
+||+|+.+..+++++|++|++|++|||+.+|+++|+++|++++++.++... ..++.++.++.+|..
T Consensus 147 ------~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 147 ------SKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred ------CCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhh
Confidence 799999999999999999999999999999999999999999999876422 357888888877653
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=195.24 Aligned_cols=191 Identities=20% Similarity=0.251 Sum_probs=142.2
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-HHHHHcCCCCChhhHhhhhhc
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGYDIGADDYHGFVHG 82 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 82 (256)
++|+|+||+||||+|+...+..++.. +++++|++..... .. ..|... ..+..+....+.+.+...+..
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~----~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDEVL----NF--IHGKQAITSLRHFMAGASEAEIQAEFTR 70 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHHHH----HH--HcCCCHHHHHHHHhccCCcHHHHHHHHH
Confidence 57999999999999999988888887 5667787642111 11 112221 122222212222222222211
Q ss_pred -----CCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 83 -----RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 83 -----~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
........++||+.++|+.|+++|+ ++||+.....+..++..++ .+|+.++++++...
T Consensus 71 ~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~------------- 136 (218)
T PRK11587 71 LEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKR------------- 136 (218)
T ss_pred HHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcC-------------
Confidence 1113467899999999999999986 9999988888888888988 46788888887765
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC---CCCCCeeeCCcCchH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN---VGEADYALENVNNLP 220 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~---~~~~~~~~~~~~el~ 220 (256)
.||+|..|..+++++|++|++|++|||+..|+++|+++|+.++++.++.. ...++++++++.+|.
T Consensus 137 -~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 137 -GKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred -CCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence 79999999999999999999999999999999999999999999986532 246889999888874
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=193.60 Aligned_cols=191 Identities=24% Similarity=0.316 Sum_probs=142.8
Q ss_pred EEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-----HHHHHcCCCCChh---hHhh-
Q 025190 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGYDIGAD---DYHG- 78 (256)
Q Consensus 8 viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~- 78 (256)
|+||+||||+|+...+..++.. +.+++|.+........ ...|... ..+...+...+.+ .+..
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLARVI----GFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL 71 (213)
T ss_pred CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence 6899999999998877777776 4566776432222211 1122221 1122222222222 2222
Q ss_pred ---hhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCC
Q 025190 79 ---FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF 152 (256)
Q Consensus 79 ---~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (256)
.+.+.. .....++||+.++|+.|+++|+ ++||+....++..++++|+..+|+.++++++...
T Consensus 72 ~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------- 139 (213)
T TIGR01449 72 FDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQ----------- 139 (213)
T ss_pred HHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCC-----------
Confidence 222211 2356899999999999999886 9999999999999999999999999999888765
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHHh
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQV 222 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~~ 222 (256)
.||+|+.|.+++++++++++++++|||+.+|+++|+++|+.++++.++.. ...++++++++.+|..+
T Consensus 140 ---~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 140 ---RKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred ---CCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 79999999999999999999999999999999999999999999976532 24689999999887654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=191.66 Aligned_cols=199 Identities=23% Similarity=0.300 Sum_probs=150.4
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-----HHHHcCCCCChhhH-
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGYDIGADDY- 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~- 76 (256)
+++++|+||+||||+|+...+..++.. +.+++|.+......... ..|.... .+...+...+.+.+
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~ 74 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERVRT----WVGNGADVLVERALTWAGREPDEELLE 74 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----HhCccHHHHHHHHHhhccCCccHHHHH
Confidence 788999999999999998877777776 45667765333322211 1121111 11111222332222
Q ss_pred ------hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCC
Q 025190 77 ------HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT 147 (256)
Q Consensus 77 ------~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 147 (256)
...+.... .....++||+.++++.|++.|+ ++||+....++..++++|+..+|+.++++++...
T Consensus 75 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------ 147 (226)
T PRK13222 75 KLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPN------ 147 (226)
T ss_pred HHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCC------
Confidence 22222211 2356899999999999999875 9999999999999999999999999999887765
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHH
Q 025190 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQ 221 (256)
Q Consensus 148 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~ 221 (256)
.||+|.++..++++++++++++++|||+.+|+++|+++|+.++++..+.. ...+++++.++.+|..
T Consensus 148 --------~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~ 219 (226)
T PRK13222 148 --------KKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLP 219 (226)
T ss_pred --------CCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHH
Confidence 79999999999999999999999999999999999999999999986542 2468899999999988
Q ss_pred hHHH
Q 025190 222 VVPE 225 (256)
Q Consensus 222 ~l~~ 225 (256)
++..
T Consensus 220 ~l~~ 223 (226)
T PRK13222 220 LLGL 223 (226)
T ss_pred HHHH
Confidence 8754
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=189.30 Aligned_cols=202 Identities=14% Similarity=0.137 Sum_probs=142.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh------HHHHHHcCCCCChhhH
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST------LAGLRALGYDIGADDY 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 76 (256)
.++|+|+||+||||+|+... ...|.+...+.+.+.+|.+...........+...+.. .......+. ....+
T Consensus 8 ~~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 84 (224)
T PRK14988 8 QDVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSERLGL--DICAM 84 (224)
T ss_pred ccCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHHhCC--CHHHH
Confidence 35799999999999996311 2344443333455677887543332211111111000 011111111 11111
Q ss_pred hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCC
Q 025190 77 HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP 153 (256)
Q Consensus 77 ~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (256)
... ......++||+.++|+.|+++|+ ++||+....++..++++|+.++|+.++++++.+.
T Consensus 85 ~~~-----~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~------------ 147 (224)
T PRK14988 85 TTE-----QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGY------------ 147 (224)
T ss_pred HHH-----HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCC------------
Confidence 111 13557899999999999999986 9999999999999999999999999999998876
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeE-EEEcCCCC--CCCCCeeeCCcCchHHhHHHH
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRT-VLVGKTVN--VGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~-v~v~~~~~--~~~~~~~~~~~~el~~~l~~~ 226 (256)
.||+|+.|.++++++|++|++|++|||+.+|+++|+++|+.+ +++..+.. +..+.....++.++.+++..+
T Consensus 148 --~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (224)
T PRK14988 148 --PKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSL 221 (224)
T ss_pred --CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhh
Confidence 799999999999999999999999999999999999999985 66765542 344556667787777777654
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-28 Score=188.80 Aligned_cols=176 Identities=20% Similarity=0.300 Sum_probs=132.3
Q ss_pred CCCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh-----HHHHHHcCCCCChhh
Q 025190 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-----LAGLRALGYDIGADD 75 (256)
Q Consensus 1 m~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 75 (256)
||.++++|+||+||||+|+...+..++.+ +..++|.+.... .. ....|.. .......+.....+.
T Consensus 1 ~~~~~~~viFD~DGTLiDs~~~~~~a~~~-----~~~~~g~~~~~~-~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~ 70 (188)
T PRK10725 1 MYDRYAGLIFDMDGTILDTEPTHRKAWRE-----VLGRYGLQFDEQ-AM----VALNGSPTWRIAQAIIELNQADLDPHA 70 (188)
T ss_pred CCCcceEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCHH-HH----HHhcCCCHHHHHHHHHHHhCCCCCHHH
Confidence 78889999999999999999888888887 445677653221 11 1112211 111222233334333
Q ss_pred Hhhhhhc---CCCCCCCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCC
Q 025190 76 YHGFVHG---RLPYDLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 76 ~~~~~~~---~~~~~~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
+...+.. ........++|+ .++|..|++.. + |+||+....++..++++|+.++|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~--------- 140 (188)
T PRK10725 71 LAREKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQH--------- 140 (188)
T ss_pred HHHHHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccC---------
Confidence 3332111 111355678886 58999998652 2 9999999999999999999999999999998876
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
.||+|+.|.+++++++++|++|++|||+.+|+++|+++|+.+|++.
T Consensus 141 -----~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 141 -----HKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred -----CCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 7999999999999999999999999999999999999999999885
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-27 Score=189.08 Aligned_cols=198 Identities=22% Similarity=0.321 Sum_probs=144.7
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHH--HH---HHHHHHh--hh---h-------HHHHHHc
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASS--LR---VELFKAY--GS---T-------LAGLRAL 67 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~--~~---~-------~~~~~~~ 67 (256)
+|+|+||+||||+|+...+..++.+ +.+.+|.+...... .. ...+..+ +. . ...+...
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRL-----LFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY 75 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHH-----HHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 5899999999999999887777776 44556654321111 10 0011111 00 0 0012223
Q ss_pred CCCCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccc
Q 025190 68 GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS 144 (256)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~ 144 (256)
+.....+.+...+.+.. .....++||+.++|+.|+++ + ++||+....++..++.+++..+|+.++++++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~--- 150 (224)
T TIGR02254 76 NTEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGI--- 150 (224)
T ss_pred CCCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCC---
Confidence 33222223333333322 23468999999999999988 5 9999999999999999999999999999988876
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC----CCCCCCeeeCCcCc
Q 025190 145 KATRPDEFPVLLKPSMDAMKLALHVA-NVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV----NVGEADYALENVNN 218 (256)
Q Consensus 145 ~~~~~~~~~~~~Kp~~~~~~~~~~~~-~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~----~~~~~~~~~~~~~e 218 (256)
.||+|.+|.++++++ +++|+++++|||+. +|+.+|+++|+.+++++++. ....+++++.++.+
T Consensus 151 -----------~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~e 219 (224)
T TIGR02254 151 -----------QKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEE 219 (224)
T ss_pred -----------CCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHH
Confidence 799999999999999 99999999999998 79999999999999997643 22457889999888
Q ss_pred hHHhH
Q 025190 219 LPQVV 223 (256)
Q Consensus 219 l~~~l 223 (256)
|.++|
T Consensus 220 l~~~~ 224 (224)
T TIGR02254 220 LYEIL 224 (224)
T ss_pred HHhhC
Confidence 87653
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-28 Score=190.13 Aligned_cols=192 Identities=21% Similarity=0.267 Sum_probs=143.8
Q ss_pred EEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-HHHHHcCCCCCh-hhHhhhhhcCCC
Q 025190 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGYDIGA-DDYHGFVHGRLP 85 (256)
Q Consensus 8 viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~ 85 (256)
|+||+||||+|+...+..++.++++ +.+|.+....+. +....|... ..+..++.+... +.+.....+ .
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 70 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYR----EVVGDGPAPFEE----YRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR--L 70 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHH----HhcCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH--h
Confidence 6899999999999988888887432 224543222221 111223222 222333322111 112111211 1
Q ss_pred CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 86 YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
.....++||+.++|+.|+++|+ ++||+....++..++++|+..+|+.++++++... +||+|..
T Consensus 71 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------~KP~~~~ 136 (205)
T TIGR01454 71 AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPR--------------PKPAPDI 136 (205)
T ss_pred hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCC--------------CCCChHH
Confidence 3467899999999999999986 9999999999999999999999999999888765 7999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC------CCCCCCeeeCCcCchHHhH
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV------NVGEADYALENVNNLPQVV 223 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~------~~~~~~~~~~~~~el~~~l 223 (256)
+..++++++++++++++|||+.+|+.+|+++|+.++++.++. ....+++++.++.+|..++
T Consensus 137 ~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 137 VREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred HHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 999999999999999999999999999999999999887654 2356899999998887765
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=203.86 Aligned_cols=193 Identities=22% Similarity=0.301 Sum_probs=148.8
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh-----HHHHHHcCCCCChhhHhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-----LAGLRALGYDIGADDYHG 78 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 78 (256)
.+++|+||+||||+|+...+..++.. +++++|.+..... .....|.. ...+...+.....+.+..
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~~-----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGRE-----AQKIVGKTPLEAAATVVEDYGLPCSTDEFNS 79 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence 47899999999999999988888887 5566776543222 11222221 112233344444444333
Q ss_pred hhhcCC--CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHH-hcCcccccceeEecccCCcccccCCCCCCC
Q 025190 79 FVHGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLK-RLEIADCFDQIICFETMNPNLSKATRPDEF 152 (256)
Q Consensus 79 ~~~~~~--~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~-~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (256)
.+.+.+ ......++||+.++|+.|+++|+ |+||+....++..++ .+|+.++|+.+++++++..
T Consensus 80 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~----------- 148 (382)
T PLN02940 80 EITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEK----------- 148 (382)
T ss_pred HHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCC-----------
Confidence 222211 13467899999999999999986 999999999998887 7899999999999998876
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC----CCCCCCeeeCCcCchH
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV----NVGEADYALENVNNLP 220 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~----~~~~~~~~~~~~~el~ 220 (256)
+||+|+.|.+++++++++|++|++|||+.+|+++|+++|+.++++.++. ....++++++++.++.
T Consensus 149 ---~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 149 ---GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred ---CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcC
Confidence 7999999999999999999999999999999999999999999998653 2356889999988875
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=189.68 Aligned_cols=177 Identities=27% Similarity=0.336 Sum_probs=135.4
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhh----hHHHHHH-cCCC--CChhhH
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS----TLAGLRA-LGYD--IGADDY 76 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~--~~~~~~ 76 (256)
++|+|+|||||||+|+.+.+.++|.+ +++++|+....... ....|. ....+.. .... ......
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDEEI-----RELHGGGIARIIDLLRKLAAGEDPADLAEL 70 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence 46899999999999999999999998 66778876443211 111221 1111111 1111 111121
Q ss_pred hhhhh--cCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 77 HGFVH--GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 77 ~~~~~--~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
..... .........++||+.++|+.|+++++ ++|++....++..++.+|+.++|+.+++++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~---------- 140 (221)
T COG0637 71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR---------- 140 (221)
T ss_pred HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------
Confidence 11111 11125678999999999999999876 7777788899999999999999999999999886
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
+||.|+.|..+++++|++|++|+.|+|+.+++++|+++||.++++..++
T Consensus 141 ----~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~ 189 (221)
T COG0637 141 ----GKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGH 189 (221)
T ss_pred ----CCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCC
Confidence 7999999999999999999999999999999999999999999998643
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-27 Score=187.40 Aligned_cols=122 Identities=22% Similarity=0.331 Sum_probs=107.4
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
...++||+.++|+.|++ ++ ++||+....++..++++|+.++|+.++++++.+. .||+|.+|.
T Consensus 93 ~~~~~~g~~~~L~~L~~-~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~--------------~KP~p~~~~ 157 (224)
T PRK09449 93 ICTPLPGAVELLNALRG-KVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGV--------------AKPDVAIFD 157 (224)
T ss_pred cCccCccHHHHHHHHHh-CCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCC--------------CCCCHHHHH
Confidence 46799999999999995 44 9999999999999999999999999999998886 799999999
Q ss_pred HHHHHcCCC-CCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC----CCCCCCeeeCCcCchHHhHH
Q 025190 165 LALHVANVD-PRHALFLDDNI-KNVTAGKALGLRTVLVGKTV----NVGEADYALENVNNLPQVVP 224 (256)
Q Consensus 165 ~~~~~~~~~-~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~----~~~~~~~~~~~~~el~~~l~ 224 (256)
++++++|+. +++|++|||+. +|+.+|+++|+.++++.++. ....+++++.++.+|.+++.
T Consensus 158 ~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 158 YALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred HHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 999999985 57999999998 69999999999999997432 22458899999998887653
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=194.75 Aligned_cols=199 Identities=23% Similarity=0.311 Sum_probs=148.2
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHH-HHHc-C-----CCCCh--
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRAL-G-----YDIGA-- 73 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-----~~~~~-- 73 (256)
.++|+|+||+||||+|+...+..++.. +..++|.+........ ...|..... .... . ...+.
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 81 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVDR-----MLLELGRPPAGLEAVR----HWVGNGAPVLVRRALAGSIDHDGVDDEL 81 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHHHH----HHhChhHHHHHHHHhcccccccCCCHHH
Confidence 467999999999999999988888887 5667777643332221 112221111 1110 0 11221
Q ss_pred -hhHhhhhhcCCC--CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCC
Q 025190 74 -DDYHGFVHGRLP--YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT 147 (256)
Q Consensus 74 -~~~~~~~~~~~~--~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 147 (256)
+.+...+.+.+. .....++||+.++|+.|+++|+ ++||+....++..++++++..+|+.++++++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~------ 155 (272)
T PRK13223 82 AEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQ------ 155 (272)
T ss_pred HHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCC------
Confidence 122222222111 2346789999999999999886 9999999999999999999999999999887765
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHH
Q 025190 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQ 221 (256)
Q Consensus 148 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~ 221 (256)
.||+|..+..+++++|+++++|++|||+.+|+++|+++|++++++.++.. ...++++++++.+|.+
T Consensus 156 --------~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~ 227 (272)
T PRK13223 156 --------KKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLP 227 (272)
T ss_pred --------CCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence 79999999999999999999999999999999999999999999976532 2469999998888876
Q ss_pred hHH
Q 025190 222 VVP 224 (256)
Q Consensus 222 ~l~ 224 (256)
++.
T Consensus 228 ~~~ 230 (272)
T PRK13223 228 GCA 230 (272)
T ss_pred HHh
Confidence 554
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=190.74 Aligned_cols=201 Identities=17% Similarity=0.191 Sum_probs=142.4
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH--HhhhhHHHHHHcCCCCChhhHhhhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFK--AYGSTLAGLRALGYDIGADDYHGFV 80 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (256)
+++|+|+||+||||+|+...+..++.+ ....+|.+.... +....+.. ............+.....+++...+
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSLE-EVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVY 75 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCHH-HHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 468999999999999998888888877 445677653322 11111110 0111112223345444555554433
Q ss_pred hcCC---CCCCCCCChhHHHHHHhhhcCcEEEecCChHHHHHHHHhcCcccccc-eeEecccCCcccccCCCCCCCCCCC
Q 025190 81 HGRL---PYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFD-QIICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 81 ~~~~---~~~~~~~~pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~~gl~~~f~-~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
.+.+ ......++||+.++|+.|+-.-.++||+....++..++++|+.++|+ .++++++.+. .
T Consensus 76 ~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~--------------~ 141 (221)
T PRK10563 76 RAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR--------------W 141 (221)
T ss_pred HHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCC--------------C
Confidence 3211 12457899999999999963223999999999999999999999996 6778777775 7
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-C---CCCCCeeeCCcCchHHhH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-N---VGEADYALENVNNLPQVV 223 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-~---~~~~~~~~~~~~el~~~l 223 (256)
||+|+.|..++++++++|++|++|||+.+|+++|+++|+.++++..+. . ...++.++.++.+|.+++
T Consensus 142 KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 212 (221)
T PRK10563 142 KPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPELW 212 (221)
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999886432 1 123344566666665543
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-27 Score=193.15 Aligned_cols=197 Identities=18% Similarity=0.268 Sum_probs=148.2
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-HHHHHcCCC-CChhhH----h
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGYD-IGADDY----H 77 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~----~ 77 (256)
++++|+||+||||+|+.+.+..++.+ +.+++|.+....... ....+... ..+..++.. ...+.+ .
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~~----~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERDY----AQLRQWSSRTIVRRAGLSPWQQARLLQRVQ 131 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhCccHHHHHHHcCCCHHHHHHHHHHHH
Confidence 67899999999999999888888887 556777653222211 11122111 222333321 111222 2
Q ss_pred hhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 78 GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 78 ~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
..+... ...++++||+.++|+.|+++|+ |+||+....++..++++|+.++|+.++++++.
T Consensus 132 ~~~~~~--~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~--------------- 194 (273)
T PRK13225 132 RQLGDC--LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI--------------- 194 (273)
T ss_pred HHHHhh--cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---------------
Confidence 222221 3567899999999999999987 99999999999999999999999998876543
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHHhHHHHHh
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQVVPEIWV 228 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~~l~~~~~ 228 (256)
++++..+..+++++++++++|++|||+.+|+.+|+++|+.++++.++.. ...|+++++++.+|.+++.++++
T Consensus 195 --~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~~ 272 (273)
T PRK13225 195 --LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLMR 272 (273)
T ss_pred --CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHhc
Confidence 3456889999999999999999999999999999999999999987642 35699999999999998877654
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=181.38 Aligned_cols=105 Identities=23% Similarity=0.392 Sum_probs=98.3
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....++||+.++|+.|+++|+ ++||+....++..++++|+.++|+.++++++++. .||+|.+|
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~--------------~KP~~~~~ 154 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRA--------------YKPAPQVY 154 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCC--------------CCCCHHHH
Confidence 456899999999999999986 9999999999999999999999999999998886 79999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN 205 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~ 205 (256)
.++++++|++|+++++|||+.+|+.+|+++|+.+|+++++.+
T Consensus 155 ~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~~ 196 (198)
T TIGR01428 155 QLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPGE 196 (198)
T ss_pred HHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCCC
Confidence 999999999999999999999999999999999999987543
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=178.37 Aligned_cols=170 Identities=24% Similarity=0.321 Sum_probs=125.5
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-----HHHHHcCCCCChhhHh--
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGYDIGADDYH-- 77 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-- 77 (256)
+|+|+||+||||+|+...+..++.. +.+++|.+... ... ....|... ..+...+...+.+.+.
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~-~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK-QYN----TSLGGLSREDILRAILKLRKPGLSLETIHQL 70 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH-HHH----HHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 4799999999999999887778776 45566765321 110 11112111 1122222233333322
Q ss_pred -----hhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 78 -----GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 78 -----~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
..+.+.+......++||+.++|+.|+++|+ ++|++ ..++..++++|+..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~-------- 140 (185)
T TIGR02009 71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKE-------- 140 (185)
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCC--------
Confidence 122222112357899999999999999886 77777 668889999999999999999988775
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
.||+|..|.+++++++++++++++|||+.+|+++|+++|+.+++|
T Consensus 141 ------~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 141 ------GKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred ------CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 799999999999999999999999999999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.2e-26 Score=181.76 Aligned_cols=199 Identities=16% Similarity=0.173 Sum_probs=136.1
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCC---CHHHHHHHHHHHHH----------H-h-hhhHHHHHHcC
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGF---SETKASSLRVELFK----------A-Y-GSTLAGLRALG 68 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----------~-~-~~~~~~~~~~~ 68 (256)
++|+|+||+||||+|+.+.+..+++.+++.+....... .......+...+.. . . ......+...+
T Consensus 9 ~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 88 (238)
T PRK10748 9 RISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDAG 88 (238)
T ss_pred CceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHcC
Confidence 56999999999999999988888887554321100011 11111111110000 0 0 01112233444
Q ss_pred CCCChh-----hHhhhhhcCCCCCCCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCcccccceeEecccCCc
Q 025190 69 YDIGAD-----DYHGFVHGRLPYDLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP 141 (256)
Q Consensus 69 ~~~~~~-----~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~ 141 (256)
.+.... .....+.. ....+.++||+.++|+.|++.. + ++||+... ++..|+..+|+.++++++.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~ 161 (238)
T PRK10748 89 LSAEEASAGADAAMINFAK--WRSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGR 161 (238)
T ss_pred CCHHHHHHHHHHHHHHHHH--HhhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCc
Confidence 432221 11111221 1245789999999999998763 2 89998765 478999999999999988876
Q ss_pred ccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC--------CCCCee
Q 025190 142 NLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV--------GEADYA 212 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~--------~~~~~~ 212 (256)
.||+|.+|..+++++|++|++|++|||+. .|+.+|+++|+.++|+++.... ..|++.
T Consensus 162 --------------~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~ 227 (238)
T PRK10748 162 --------------SKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIE 227 (238)
T ss_pred --------------CCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEE
Confidence 79999999999999999999999999995 9999999999999999864321 358888
Q ss_pred eCCcCchHHhH
Q 025190 213 LENVNNLPQVV 223 (256)
Q Consensus 213 ~~~~~el~~~l 223 (256)
+.++.||.++|
T Consensus 228 i~~l~el~~~~ 238 (238)
T PRK10748 228 ISRLASLTSLI 238 (238)
T ss_pred ECCHHHHHhhC
Confidence 88888887653
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-26 Score=180.96 Aligned_cols=123 Identities=26% Similarity=0.452 Sum_probs=112.7
Q ss_pred CCCCChhHHHHHHhhhcC--cEEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQR--KIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~--~~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
..+++|++.+.|+.|+++ -.++||+....++..++.+|+.++||.++++++.+. .||+|.+|..
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~--------------~KP~~~~f~~ 162 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGV--------------AKPDPEIFEY 162 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccccc--------------CCCCcHHHHH
Confidence 579999999999999998 239999999999999999999999999999999986 8999999999
Q ss_pred HHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC-----CCCCeeeCCcCchHHhHH
Q 025190 166 ALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV-----GEADYALENVNNLPQVVP 224 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~-----~~~~~~~~~~~el~~~l~ 224 (256)
+++++|++|+++++|||+. +||.+|+++||++||++++... ..+++.+.++.+|.+++.
T Consensus 163 ~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~ 227 (229)
T COG1011 163 ALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLE 227 (229)
T ss_pred HHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHh
Confidence 9999999999999999999 7889999999999999876532 468899999999888775
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=178.35 Aligned_cols=171 Identities=23% Similarity=0.260 Sum_probs=124.5
Q ss_pred EEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhh---hHHHHHHcCCCCChhhHhh-----
Q 025190 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS---TLAGLRALGYDIGADDYHG----- 78 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----- 78 (256)
+|+||+||||+|+...+..++.+ +.+.+|++..... . ..+...+. ....+...+...+.+.+.+
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~-~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEEF-N--ESLKGVSREDSLERILDLGGKKYSEEEKEELAERK 72 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHH-H--HHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 48999999999999988888887 5566777532211 1 11111111 1112223344444333221
Q ss_pred --hhhcCCC-CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCC
Q 025190 79 --FVHGRLP-YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF 152 (256)
Q Consensus 79 --~~~~~~~-~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (256)
.+.+.+. .....++||+.++|+.|+++|+ ++||+.. .+..++.+|+..+|+.++++++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~----------- 139 (185)
T TIGR01990 73 NDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKK----------- 139 (185)
T ss_pred HHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCC-----------
Confidence 1211110 1235789999999999999986 7887643 4678999999999999999988876
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
.||+|+.|.++++++++++++|++|||+.+|+++|+++|+++|+|+
T Consensus 140 ---~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 140 ---GKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred ---CCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 7999999999999999999999999999999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=185.52 Aligned_cols=199 Identities=19% Similarity=0.284 Sum_probs=136.4
Q ss_pred CCCeEEEEecCCCccCCC-ccHHHHHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHHhhhhH----HHHHHcCCC------
Q 025190 3 SPFNCLVFDLDDTLYPSE-TGIAAAVKRNIEGFLIEKCGFSET-KASSLRVELFKAYGSTL----AGLRALGYD------ 70 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~------ 70 (256)
..+++|+||+||||+|+. ..+..+|.+ +++.+|++.. ........+. ..|... ..+...+..
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~-----~l~~~G~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~ 111 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDGHRVAFND-----AFKEFGLRPVEWDVELYDELL-NIGGGKERMTWYFNENGWPTSTIEK 111 (286)
T ss_pred cCCcEEEEeCceeEEccccHHHHHHHHH-----HHHHcCCCCCCCCHHHHHHHH-ccCCChHHHHHHHHHcCCCcccccc
Confidence 357899999999999999 888889887 5566777311 1011000011 122111 111111111
Q ss_pred --CChhh-------Hh----hhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccc--e
Q 025190 71 --IGADD-------YH----GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFD--Q 132 (256)
Q Consensus 71 --~~~~~-------~~----~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~--~ 132 (256)
..++. +. ..+.+......+.++||+.++|+.|+++|+ ++||+....+..+++.++...+++ .
T Consensus 112 ~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~ 191 (286)
T PLN02779 112 APKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLD 191 (286)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceE
Confidence 11111 11 112211112236899999999999999986 999999999998888774434443 2
Q ss_pred eEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----CCC
Q 025190 133 IICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN----VGE 208 (256)
Q Consensus 133 i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----~~~ 208 (256)
++++++++. .||+|++|.++++++|++|++|++|||+.+|+++|+++|+.+|++.++.. -..
T Consensus 192 ~v~~~~~~~--------------~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ 257 (286)
T PLN02779 192 VFAGDDVPK--------------KKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSG 257 (286)
T ss_pred EEeccccCC--------------CCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCC
Confidence 336666654 79999999999999999999999999999999999999999999976532 145
Q ss_pred CCeeeCCcCchHH
Q 025190 209 ADYALENVNNLPQ 221 (256)
Q Consensus 209 ~~~~~~~~~el~~ 221 (256)
++++++++.++..
T Consensus 258 ad~vi~~~~~l~~ 270 (286)
T PLN02779 258 ADAVFDCLGDVPL 270 (286)
T ss_pred CcEEECChhhcch
Confidence 8999999999764
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=197.51 Aligned_cols=201 Identities=15% Similarity=0.226 Sum_probs=143.9
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHhhhhHHH-HHHcCCCCC---hhhHhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKC-GFSETKASSLRVELFKAYGSTLAG-LRALGYDIG---ADDYHG 78 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~ 78 (256)
|+++|+||+||||+|+...+..+|.++++++..... +.. .... .+....|..... +..+..... .+.+..
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~-~~~~----~~~~~~G~~~~~~~~~l~~~~~~~~~~~~~~ 314 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTV-TPID----KYREIMGVPLPKVWEALLPDHSLEIREQTDA 314 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCC-CCHH----HHHHHcCCChHHHHHHHhhhcchhHHHHHHH
Confidence 568999999999999999999999986655421111 111 1111 111222322211 111111111 122222
Q ss_pred hhhc----CCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 79 FVHG----RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 79 ~~~~----~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
.+.+ .......+++||+.++|+.|+++|+ |+||+....++..++++|+.++|+.++++++..
T Consensus 315 ~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~----------- 383 (459)
T PRK06698 315 YFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN----------- 383 (459)
T ss_pred HHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-----------
Confidence 2222 1112356899999999999999886 999999999999999999999999999988764
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----CCCCCeeeCCcCchHHhHHHH
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN----VGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----~~~~~~~~~~~~el~~~l~~~ 226 (256)
.||+|..+..++++++ +++|++|||+.+|+.+|+++|+.++++.++.. ...+++++.++.+|.+++..+
T Consensus 384 ----~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 384 ----SLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred ----CCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 4677789999998865 68999999999999999999999999976532 245899999999998887654
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-25 Score=173.92 Aligned_cols=173 Identities=20% Similarity=0.287 Sum_probs=123.8
Q ss_pred eEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHH--HHHHHHHH-------h----hhhH---------HH
Q 025190 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASS--LRVELFKA-------Y----GSTL---------AG 63 (256)
Q Consensus 6 k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~----~~~~---------~~ 63 (256)
|+|+||+||||+|+...+..++.+ +.+++|.+....+. .....+.. + |... ..
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT 75 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 589999999999999988888887 55667775322111 10011110 0 1111 11
Q ss_pred HHHcCCCCChhhH---hhhhhc-CCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEec
Q 025190 64 LRALGYDIGADDY---HGFVHG-RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICF 136 (256)
Q Consensus 64 ~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~ 136 (256)
+...+. ...+.+ ...+.. ........++||+.++|+.|+++|+ |+||+... ++..++.+|+..+|+.++++
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s 153 (203)
T TIGR02252 76 FGRAGV-PDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTS 153 (203)
T ss_pred HHhcCC-CCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEee
Confidence 122221 111122 121111 1112345789999999999999875 89998765 57889999999999999999
Q ss_pred ccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEE
Q 025190 137 ETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVL 199 (256)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~ 199 (256)
++.+. .||+|..|.++++++|++|+++++|||+. +|+.+|+++|+.+||
T Consensus 154 ~~~~~--------------~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 154 YEVGA--------------EKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred cccCC--------------CCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 88876 79999999999999999999999999998 899999999999885
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-26 Score=173.78 Aligned_cols=172 Identities=31% Similarity=0.501 Sum_probs=126.5
Q ss_pred EEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-HHHHcCCCCChhhHhhhhhcCCCC
Q 025190 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGADDYHGFVHGRLPY 86 (256)
Q Consensus 8 viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 86 (256)
|+||+||||+|+...+..++.. .+.+.++.+.. .+.........+..... .+...+ .....+.+.+.+....
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 73 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQR----LALEEFGLEIS-AEELRELFGKSYEEALERLLERFG--IDPEEIQELFREYNLE 73 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHH----HHHHHTTHHHH-HHHHHHHTTSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred cEEECCCCcEeCHHHHHHHHHH----HHHHHhCCCCC-HHHHHHHhCCCHHHHHHHhhhccc--hhHHHHHHHhhhhhhh
Confidence 7999999999988766666665 23455555422 22221111111111111 111111 1133333333332223
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....++||+.++|+.|+++|+ ++||+....++..++++|+..+|+.++++++.+. .||++.+|
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~--------------~Kp~~~~~ 139 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS--------------RKPDPDAY 139 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS--------------STTSHHHH
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh--------------hhhHHHHH
Confidence 677999999999999998876 9999999999999999999999999999998886 79999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
.+++++++++|+++++|||+..|+.+|+++|+.+|+|
T Consensus 140 ~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 140 RRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp HHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 9999999999999999999999999999999999986
|
... |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.7e-24 Score=200.71 Aligned_cols=194 Identities=19% Similarity=0.293 Sum_probs=147.2
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHH-----HHcCC-CCChhh-
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-----RALGY-DIGADD- 75 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~- 75 (256)
+++|+|+||+||||+|+...+..++.+ +++++|++..... +...+|.....+ ...+. ....+.
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e~-----~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~ 142 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVED-----FVPFMGTGEANFLGGVASVKGVKGFDPDAA 142 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 468999999999999999988888887 5566777643221 112223222111 11121 122222
Q ss_pred ---HhhhhhcCCC-CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc-cccceeEecccCCcccccCC
Q 025190 76 ---YHGFVHGRLP-YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA-DCFDQIICFETMNPNLSKAT 147 (256)
Q Consensus 76 ---~~~~~~~~~~-~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~~~~~~ 147 (256)
+...+.+.+. .....++||+.++|+.|+++|+ |+||+....++..++++|+. .+|+.++++++...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~------ 216 (1057)
T PLN02919 143 KKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFEN------ 216 (1057)
T ss_pred HHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccccc------
Confidence 2222222111 1223579999999999999987 99999999999999999996 78999999998876
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----CCCCCeeeCCcCchH
Q 025190 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----VGEADYALENVNNLP 220 (256)
Q Consensus 148 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~~~~~~~~~~el~ 220 (256)
.||+|++|.+++++++++|++|++|||+..|+++|+++||.++++.++.. ...++++++++.++.
T Consensus 217 --------~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~ 286 (1057)
T PLN02919 217 --------LKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNIS 286 (1057)
T ss_pred --------CCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCC
Confidence 79999999999999999999999999999999999999999999987642 357899999999874
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.1e-24 Score=167.95 Aligned_cols=102 Identities=25% Similarity=0.283 Sum_probs=89.1
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHH--HHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNH--AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
...++||+.++|+.|+++|+ ++||+.... ....+...++.++|+.++++++.+. .||+|..
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~--------------~KP~p~~ 157 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGL--------------RKPDPRI 157 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCC--------------CCCCHHH
Confidence 56899999999999999886 889986543 3334555788899999999888875 7999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
|..+++++|++|++|++|||+..|+.+|+++|+.++++.+.
T Consensus 158 ~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 158 YQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 99999999999999999999999999999999999998653
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=165.29 Aligned_cols=180 Identities=9% Similarity=0.058 Sum_probs=120.4
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-H-HHHHcCCCCChhh---Hhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-A-GLRALGYDIGADD---YHG 78 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~---~~~ 78 (256)
|+|+|+||+||||+|... ++.. +.+++|++.... ....+... . ....++ ...+. +..
T Consensus 1 m~k~viFDlDGTLiD~~~----~~~~-----~~~~~g~~~~~~-------~~~~g~~~~~~~~~~~~--~~~~~~~~~~~ 62 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQS----GLPY-----FAQKYNIPTDHI-------LKMIQDERFRDPGELFG--CDQELAKKLIE 62 (197)
T ss_pred CCcEEEEecCCceEchhh----ccHH-----HHHhcCCCHHHH-------HHHHhHhhhcCHHHHhc--ccHHHHHHHhh
Confidence 368999999999999543 3333 456778764211 11111110 0 111111 12222 222
Q ss_pred hhhcCCCCCCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccc----cceeEecccCCcccccCCCCCCC
Q 025190 79 FVHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADC----FDQIICFETMNPNLSKATRPDEF 152 (256)
Q Consensus 79 ~~~~~~~~~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~----f~~i~~~~~~~~~~~~~~~~~~~ 152 (256)
.+.+........++||+.++|+.|++.+. ++||+........++.+++..+ |+.+++++.
T Consensus 63 ~~~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~-------------- 128 (197)
T PHA02597 63 KYNNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH-------------- 128 (197)
T ss_pred hhhHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc--------------
Confidence 22211113456799999999999988643 7788766666667778877654 456666554
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHc--CCeEEEEcCCCCC--CCCCeeeCCcCchH
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKAL--GLRTVLVGKTVNV--GEADYALENVNNLP 220 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~--G~~~v~v~~~~~~--~~~~~~~~~~~el~ 220 (256)
.||||+.|..+++++| ++++++|||+.+|+.+|+++ |+.+++++++... ..+++.+.++.|+.
T Consensus 129 ---~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 129 ---DESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred ---CcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhhccccchhhhhccHHHHh
Confidence 3677899999999999 78899999999999999999 9999999877543 34667788777764
|
2 hypothetical protein; Provisional |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-23 Score=165.41 Aligned_cols=194 Identities=14% Similarity=0.155 Sum_probs=125.4
Q ss_pred CCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH----HHHHHcCCCCChhhHh
Q 025190 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL----AGLRALGYDIGADDYH 77 (256)
Q Consensus 2 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 77 (256)
++++|+|+||+||||+++.. +.. +...+|.+.... .....+....-... ..+..+ .....+.+.
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~-----~~~-----l~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~ 78 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAET-----IDE-----IAKIAGVEEEVS-EITERAMRGELDFKASLRERVALL-KGLPVELLK 78 (219)
T ss_pred hccCCEEEEeCcccCCCchH-----HHH-----HHHHhCCHHHHH-HHHHHHHcCCCCHHHHHHHHHHHh-CCCCHHHHH
Confidence 46789999999999999852 333 344556542221 11111111100000 111111 122233332
Q ss_pred hhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 78 GFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 78 ~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
... ....++||+.++|+.|+++|+ |+|++....++.+++.+|+..+|+..+..++.. +.+. ......
T Consensus 79 ~~~------~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~---~~~~-~~~~~~ 148 (219)
T TIGR00338 79 EVR------ENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGK---LTGL-VEGPIV 148 (219)
T ss_pred HHH------hcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCE---EEEE-ecCccc
Confidence 222 345799999999999999886 999999999999999999988886543322110 0000 001112
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcC
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVN 217 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~ 217 (256)
.++||+..++.+++++++++++|++|||+.+|+++|+.+|+.+++.+.......+++++.+.+
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~~~~ 211 (219)
T TIGR00338 149 DASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKADICINKKD 211 (219)
T ss_pred CCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhchhccCCCC
Confidence 356789999999999999999999999999999999999999776544333456788877553
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-24 Score=165.94 Aligned_cols=97 Identities=36% Similarity=0.540 Sum_probs=89.6
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
..++||+.++|+.|+++|+ ++||+.... ...+.++|+.++|+.++++++.+. +||+|..|..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~--------------~KP~~~~~~~ 148 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGR--------------GKPDPDIYLL 148 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCC--------------CCCCHHHHHH
Confidence 6899999999999999885 999998888 666777999999999999888775 8999999999
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
++++++++|+++++|||+..|+.+|+++|+.+|++
T Consensus 149 ~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 149 ALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred HHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 99999999999999999999999999999999875
|
HAD subfamilies caused by an overly broad single model. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=158.14 Aligned_cols=120 Identities=18% Similarity=0.346 Sum_probs=99.3
Q ss_pred HcCCCCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHh-cCcccccceeEecccCCc
Q 025190 66 ALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR-LEIADCFDQIICFETMNP 141 (256)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~ 141 (256)
..+...+.+.+...+.+. ...++||+.++|+.|+++|+ ++||+........+.. .++..+|+.++++++.+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~----~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~ 139 (199)
T PRK09456 64 EMALSLSYEQFAHGWQAV----FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGM 139 (199)
T ss_pred HhCCCCCHHHHHHHHHHH----HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCC
Confidence 344444445554444332 23589999999999999886 9999988877766655 478889999999999886
Q ss_pred ccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 142 NLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
.||+|+.|.++++++|++|++|++|||+..|+.+|+++|+.++++.++
T Consensus 140 --------------~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 140 --------------RKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred --------------CCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 799999999999999999999999999999999999999999998764
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=159.06 Aligned_cols=165 Identities=18% Similarity=0.215 Sum_probs=115.0
Q ss_pred EEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhh-----------hHHHHHHc-----CCC
Q 025190 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS-----------TLAGLRAL-----GYD 70 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-----~~~ 70 (256)
+|+||+||||+|+.+.+..++..+ ++.+|......+.... +. ..+. ....+... ...
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~-----~~~~g~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDT-----VEHFGGVSVTHADIDH-TK-LAGNANNDWQLTHRLVVDGLNSASSERVRDA 74 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHH-----HHHHcCCCCCHHHHHH-HH-HccCccCchHHHHHHHHHhhhcccchhccCC
Confidence 689999999999999988899884 4445421111111111 11 0000 00111110 012
Q ss_pred CChhhHhhhhhcCCC----C--------CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEe
Q 025190 71 IGADDYHGFVHGRLP----Y--------DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIIC 135 (256)
Q Consensus 71 ~~~~~~~~~~~~~~~----~--------~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~ 135 (256)
...+.+...+.+.+. + ....+.++..++|+.|+++|+ ++||+....++..++.+|+..+|+.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~ 154 (197)
T TIGR01548 75 PTLEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIW 154 (197)
T ss_pred ccHHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEe
Confidence 233333333322211 0 122455667999999999886 9999999999999999999999999999
Q ss_pred cccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHc
Q 025190 136 FETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 193 (256)
+++.. .||+|..+..+++++++++++|++|||+.+|+.+|+++
T Consensus 155 ~~~~~---------------~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 155 MEDCP---------------PKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred ecCCC---------------CCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 88765 49999999999999999999999999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.6e-23 Score=162.99 Aligned_cols=185 Identities=19% Similarity=0.223 Sum_probs=131.2
Q ss_pred cCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-----HHHHHcCCC--CChhhHhhhhhcCC
Q 025190 12 LDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGYD--IGADDYHGFVHGRL 84 (256)
Q Consensus 12 ~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~ 84 (256)
+||||+|+...+..+|.+ +.+++|.+.. .+. .....|... ......+.+ ...+.+........
T Consensus 1 ~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~-~~~----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEK-----ILARYGKTFD-WSL----KAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML 70 (220)
T ss_pred CCCcceecHHHHHHHHHH-----HHHHcCCCCC-HHH----HHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 699999999988888887 5567776532 111 111233221 112222332 12223222211111
Q ss_pred --CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHH-HHHhcCcccccceeEecc--cCCcccccCCCCCCCCCCC
Q 025190 85 --PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAIT-CLKRLEIADCFDQIICFE--TMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 85 --~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~-~l~~~gl~~~f~~i~~~~--~~~~~~~~~~~~~~~~~~~ 156 (256)
......++||+.++|+.|+++|+ |+||+....... .++..++.++|+.+++++ +++. +
T Consensus 71 ~~~~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~--------------~ 136 (220)
T PLN02811 71 QDLFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQ--------------G 136 (220)
T ss_pred HHHHhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccC--------------C
Confidence 02356889999999999999987 999988765544 444557888999999998 6665 7
Q ss_pred CCCHHHHHHHHHHcC---CCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----CCCCCeeeCCcCchH
Q 025190 157 KPSMDAMKLALHVAN---VDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN----VGEADYALENVNNLP 220 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~---~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----~~~~~~~~~~~~el~ 220 (256)
||+|++|..++++++ +++++|++|||+..|+++|+++|++++++.++.. ...+++++.++.++.
T Consensus 137 KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 137 KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 999999999999996 9999999999999999999999999999976532 235788888887753
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=156.39 Aligned_cols=160 Identities=16% Similarity=0.195 Sum_probs=112.3
Q ss_pred EEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCC---HHHHHHHHHHHHH-Hhh-----------hhHHHHHHcCCCC
Q 025190 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFS---ETKASSLRVELFK-AYG-----------STLAGLRALGYDI 71 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~ 71 (256)
+|+||+||||+|+...+..++...+ ...+.. +.. ......+.. ..+ .........+...
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 74 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIA-----PEGGAFSDLWRA-KQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDA 74 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhh-----hhhhHHHHHHHH-HHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999987777777632 222210 010 000001110 011 1111223444444
Q ss_pred ChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcEEEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 72 GADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
+.+.. ..+.+. +....++||+.++|+. -.|+||+....++..++++|+..+|+.++++++++.
T Consensus 75 ~~~~~-~~~~~~--~~~~~~~~g~~~~L~~----~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~---------- 137 (175)
T TIGR01493 75 EPKYG-ERLRDA--YKNLPPWPDSAAALAR----VAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRA---------- 137 (175)
T ss_pred CHHHH-HHHHHH--HhcCCCCCchHHHHHH----HhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCC----------
Confidence 44322 222221 2456799999999993 239999999999999999999999999999998776
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHc
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 193 (256)
.||+|+.|..+++++|++|++|++|||+.+|+.+|+++
T Consensus 138 ----~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 138 ----YKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred ----CCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 79999999999999999999999999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.2e-22 Score=149.12 Aligned_cols=151 Identities=21% Similarity=0.311 Sum_probs=111.0
Q ss_pred EEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhcCCCC
Q 025190 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPY 86 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (256)
+|+||+||||+|+...+..++..++ ++++.+..... ...|.....+.... ..+.+.. . + .
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~-----~~~~~~~~~~~-------~~~g~~~~~~~~~~-----~~~~~~~-~-~-~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETL-----EEFGEDFQALK-------ALRGLAEELLYRIA-----TSFEELL-G-Y-D 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHH-----HHhcccHHHHH-------HHHccChHHHHHHH-----HHHHHHh-C-c-c
Confidence 4899999999999888888888743 44454322111 11111111111100 0111111 1 1 2
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.....+||+.++|+.|+++|+ ++||+....+...++++ +..+|+.++++++.+ .||+|+.+
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~---------------~Kp~~~~~ 124 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG---------------AKPEPEIF 124 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC---------------CCcCHHHH
Confidence 344567999999999998876 99999999999999998 888999999887765 69999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALG 194 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G 194 (256)
.++++++++++ +|++|||+..|+.+|+++|
T Consensus 125 ~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 125 LAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 99999999999 9999999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.9e-21 Score=152.62 Aligned_cols=202 Identities=17% Similarity=0.214 Sum_probs=127.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHH-cC-CCCChhhHhhhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRA-LG-YDIGADDYHGFV 80 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 80 (256)
+++|+|+||+||||++++. +.. +.+.+|.+.... .....+....-.....+.. ++ .....+.+...+
T Consensus 10 ~~~k~viFDfDGTL~~~~~-----~~~-----~~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEG-----IDE-----LAEFCGAGEAVA-EWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFL 78 (224)
T ss_pred ccCCEEEEeCCCcccchHH-----HHH-----HHHHcCChHHHH-HHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4679999999999999853 232 556677642222 1111111110001111111 11 112334444444
Q ss_pred hcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc--cccceeEecccCCcccccCCCCCCCCCC
Q 025190 81 HGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA--DCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 81 ~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
.+ ....++||+.++|+.|+++|+ |+|++....++.+++.+|+. ++|...+..+..+ .+.++........
T Consensus 79 ~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~~~~~~~~ 152 (224)
T PLN02954 79 EK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFDENEPTSR 152 (224)
T ss_pred HH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECccCCCcccC
Confidence 32 235689999999999999986 99999999999999999997 3564322221111 1112221222234
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-----CCCCCCeeeCCcCchHHhH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-----NVGEADYALENVNNLPQVV 223 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-----~~~~~~~~~~~~~el~~~l 223 (256)
.++||..+..++++++. +++++|||+.+|+.+++.+|+.++....+. ....+++++.++.+|.+++
T Consensus 153 ~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 67788999999998885 689999999999999999888866543221 1245899999998887654
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-21 Score=148.20 Aligned_cols=126 Identities=20% Similarity=0.201 Sum_probs=97.9
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCCh---------------HHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
.+.++||+.++|+.|+++|+ ++||+.. +.+...++++|+ .|+.++.+.....
T Consensus 27 ~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~-------- 96 (181)
T PRK08942 27 EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPE-------- 96 (181)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC--------
Confidence 34789999999999999986 8998762 334556777776 3777765432110
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----CCCC--CeeeCCcCchHHh
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----VGEA--DYALENVNNLPQV 222 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~~--~~~~~~~~el~~~ 222 (256)
+.....||+|.+|.+++++++++++++++|||+.+|+.+|+++|+.++++.++.. ...+ ++++.++.++.++
T Consensus 97 -~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 97 -DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred -CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 1112379999999999999999999999999999999999999999999976532 2345 8999999888876
Q ss_pred HH
Q 025190 223 VP 224 (256)
Q Consensus 223 l~ 224 (256)
+.
T Consensus 176 l~ 177 (181)
T PRK08942 176 LK 177 (181)
T ss_pred HH
Confidence 64
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=147.69 Aligned_cols=181 Identities=19% Similarity=0.270 Sum_probs=127.0
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhh----------h-----hHHHHH--
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYG----------S-----TLAGLR-- 65 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-----~~~~~~-- 65 (256)
+++|+|+||++|||+...+.....+.. ..+.+|.+.... .....+...+. . .....+
T Consensus 5 ~~iravtfD~~~tLl~~~~~~~~~y~~-----i~~~~gl~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~ 78 (237)
T KOG3085|consen 5 MRIRAVTFDAGGTLLATLPPVMEVYCE-----IAEAYGLEYDDS-LIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPK 78 (237)
T ss_pred cceEEEEEeCCCceeecCCccHHHHHH-----HHHHhCCCCCHH-HHhHhhhHHHHhhcccCCcccccCCcccHHHHHHH
Confidence 789999999999999877777777776 677788764332 11111111110 0 000000
Q ss_pred ----Hc---CCCCChhhHhhhhhcCCCC---CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce
Q 025190 66 ----AL---GYDIGADDYHGFVHGRLPY---DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ 132 (256)
Q Consensus 66 ----~~---~~~~~~~~~~~~~~~~~~~---~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~ 132 (256)
.+ +.+...+.........+.. ....+.++..+++++||++|. ++||.+.. .+..+..+|+..+||.
T Consensus 79 lv~~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~fD~ 157 (237)
T KOG3085|consen 79 LVESTFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAYFDF 157 (237)
T ss_pred HHHHHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHhhhh
Confidence 00 1111111111111111111 355677888899999999996 56665544 5589999999999999
Q ss_pred eEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC
Q 025190 133 IICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 133 i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~ 204 (256)
++.+...+. .||+|.+|..+++.++++|++|++|||+. ||+++|+++|+.++.|.+..
T Consensus 158 vv~S~e~g~--------------~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~ 216 (237)
T KOG3085|consen 158 VVESCEVGL--------------EKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSI 216 (237)
T ss_pred hhhhhhhcc--------------CCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcccc
Confidence 999999987 79999999999999999999999999999 89999999999999997554
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=147.32 Aligned_cols=194 Identities=21% Similarity=0.208 Sum_probs=145.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH----H-HHHHcCCCCChhhHh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL----A-GLRALGYDIGADDYH 77 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~ 77 (256)
..+.+++||+||||+|+...+..++++ .+.++|...+.... ....|... + .+.......+.+++.
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~~~~-----~~~mG~~~~eaa~~~~~~~~dp~s~ee~~ 77 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPWDVK-----VKSMGKRTSEAARLFVKKLPDPVSREEFN 77 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChHHHH-----HHHcCCCHHHHHHHHHhhcCCCCCHHHHH
Confidence 456789999999999999999999888 66777764332211 11223221 1 122445567777776
Q ss_pred hhhhcCC--CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcC-cccccceeEecccCCcccccCCCCCC
Q 025190 78 GFVHGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLE-IADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 78 ~~~~~~~--~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~g-l~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
...++.. ......++||+.++++.|+.+|+ ++|+.........+++++ +...|+.++.+++...
T Consensus 78 ~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v---------- 147 (222)
T KOG2914|consen 78 KEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEV---------- 147 (222)
T ss_pred HHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccc----------
Confidence 6555422 25677899999999999999998 999999999999998887 6677877776443322
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCC-CcEEEEcCCccccHHHHHcCCeEEEEcCCCC----CCCCCeeeCCcCc
Q 025190 152 FPVLLKPSMDAMKLALHVANVDP-RHALFLDDNIKNVTAGKALGLRTVLVGKTVN----VGEADYALENVNN 218 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~-~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----~~~~~~~~~~~~e 218 (256)
..+||+|++|..+++.+|.++ +.|++++|++..+++|+++||.+++++.... ...++.+++++.+
T Consensus 148 --~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~ 217 (222)
T KOG2914|consen 148 --KNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLED 217 (222)
T ss_pred --cCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccc
Confidence 247999999999999999988 9999999999999999999999999987432 2446666655543
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-20 Score=146.16 Aligned_cols=114 Identities=10% Similarity=0.048 Sum_probs=89.2
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....++||+.++|+.|+++|+ |+|++....++.+++.+|+..+|...+..++.+.. .. .+ ......++++..+
T Consensus 77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~--~p-~~-~~~~~~~~k~~~~ 152 (201)
T TIGR01491 77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI--QP-DG-IVRVTFDNKGEAV 152 (201)
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE--ec-ce-eeEEccccHHHHH
Confidence 345799999999999999986 99999999999999999998888776665443320 00 00 0001124455789
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
..++++++++++++++|||+.+|+++|+.+|+.++..+.+.
T Consensus 153 ~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 153 ERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred HHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 99999999999999999999999999999999988776554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-20 Score=154.74 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=100.0
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce-------eEecccCCcccccCCCCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ-------IICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~-------i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
..++++||+.++++.|++.|+ |+|++....++.+++++|++..+.. .+++...+ ....+
T Consensus 178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g-----------~iv~~ 246 (322)
T PRK11133 178 ENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG-----------DIVDA 246 (322)
T ss_pred HhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC-----------ccCCc
Confidence 346799999999999999986 9999999989999999998754432 22222111 12346
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVV 223 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l 223 (256)
|||++.++.+++++|+++++|++|||+.||++|++.+|+++++...+..+..++++++ ..+|..+|
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad~~i~-~~~l~~~l 312 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQVTIR-HADLMGVL 312 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEec-CcCHHHHH
Confidence 8999999999999999999999999999999999999999998555656678899886 55555544
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.5e-21 Score=146.32 Aligned_cols=121 Identities=19% Similarity=0.177 Sum_probs=95.7
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChH--------HHHHHHHhcCcccccceeE-ecccCCcccccCCCCCCCCCCC
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRN--------HAITCLKRLEIADCFDQII-CFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~--------~~~~~l~~~gl~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
+.++||+.++|++|+++|+ ++||.... .....++.+|+..+|.... +++.... .
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~--------------~ 92 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC--------------R 92 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC--------------C
Confidence 3689999999999999986 89987631 2344577777765544333 3333343 7
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------------CCCCCeeeCCcCchHHhH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------------VGEADYALENVNNLPQVV 223 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------------~~~~~~~~~~~~el~~~l 223 (256)
||+|..|.+++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++++.++.+|.++|
T Consensus 93 KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 93 KPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999976531 245889999988887754
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-20 Score=149.07 Aligned_cols=190 Identities=11% Similarity=0.102 Sum_probs=122.2
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH---hhhhHHHHHHcCCCCChhhHhhhhh
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKA---YGSTLAGLRALGYDIGADDYHGFVH 81 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (256)
.++|+||+||||++++..+ . +.+.++- .........+... ++.......+.......+++...+.
T Consensus 3 ~~~vifDfDgTi~~~d~~~-~---------~~~~~~~--~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 70 (219)
T PRK09552 3 SIQIFCDFDGTITNNDNII-A---------IMKKFAP--PEWEELKDDILSQELSIQEGVGQMFQLLPSNLKEEIIQFLL 70 (219)
T ss_pred CcEEEEcCCCCCCcchhhH-H---------HHHHhCH--HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHHHHHH
Confidence 3589999999999998643 1 1222321 2222222222221 1222222222211112244444432
Q ss_pred cCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc--cc--ceeEecccCCcccccCCCCCCCCC
Q 025190 82 GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD--CF--DQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 82 ~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~--~f--~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
....++||+.++|+.|+++|+ |+|++....++.+++++ +.. ++ +..++++....
T Consensus 71 -----~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~------------- 131 (219)
T PRK09552 71 -----ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI------------- 131 (219)
T ss_pred -----hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE-------------
Confidence 446899999999999999987 99999999999999998 643 22 23333333322
Q ss_pred CCCCCHHH----------HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC----CCCCCCCCeeeCCcCchH
Q 025190 155 LLKPSMDA----------MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK----TVNVGEADYALENVNNLP 220 (256)
Q Consensus 155 ~~Kp~~~~----------~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~----~~~~~~~~~~~~~~~el~ 220 (256)
.||.|.. ...++++++.++.+|++||||.+|+++|+.+|+.++ ... ......+.+.++++.|+.
T Consensus 132 -~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a-~~~l~~~~~~~~~~~~~~~~f~ei~ 209 (219)
T PRK09552 132 -TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA-RDFLITKCEELGIPYTPFETFHDVQ 209 (219)
T ss_pred -eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee-HHHHHHHHHHcCCCccccCCHHHHH
Confidence 4555432 346888899999999999999999999999999554 111 113455888899999998
Q ss_pred HhHHHHH
Q 025190 221 QVVPEIW 227 (256)
Q Consensus 221 ~~l~~~~ 227 (256)
+.|+.++
T Consensus 210 ~~l~~~~ 216 (219)
T PRK09552 210 TELKHLL 216 (219)
T ss_pred HHHHHHh
Confidence 8887765
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-20 Score=143.81 Aligned_cols=128 Identities=18% Similarity=0.192 Sum_probs=96.4
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCCh---------------HHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
.+.++||+.++|++|+++|+ ++||... ..+...++.+++. |+.++.+...... ..+.
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~---~~~~ 98 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEG---VEEF 98 (176)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcc---cccc
Confidence 34689999999999999987 8999874 3445567777766 7776654221100 0000
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeE-EEEcCCCC-----CCCCCeeeCCcCchH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRT-VLVGKTVN-----VGEADYALENVNNLP 220 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~-v~v~~~~~-----~~~~~~~~~~~~el~ 220 (256)
++....+||+|.+|.++++++++++++++||||+.+|+++|+++|+.+ +++.++.. ...|+++++++.+|.
T Consensus 99 ~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 99 RQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred cCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 011224799999999999999999999999999999999999999998 78876642 245899999998875
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-19 Score=143.08 Aligned_cols=195 Identities=14% Similarity=0.136 Sum_probs=123.7
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHH-HHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhcC
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSL-RVELFKAYGSTLAGLRALGYDIGADDYHGFVHGR 83 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (256)
+++|+||+||||++. .|.. +.+.+|.+....... ...+...++.....+.. ...+.+++...+
T Consensus 1 ~~~v~FD~DGTL~~~------~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~i~~~~--- 64 (205)
T PRK13582 1 MEIVCLDLEGVLVPE------IWIA-----FAEKTGIPELRATTRDIPDYDVLMKQRLDILDE--HGLGLADIQEVI--- 64 (205)
T ss_pred CeEEEEeCCCCChhh------HHHH-----HHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHH--cCCCHHHHHHHH---
Confidence 378999999999932 3432 445677653211000 00111122222222222 224555554443
Q ss_pred CCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 84 LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 84 ~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
....++||+.++|+.|+++ + ++|++....++..++++|+..+|...+..++.+. ..+ ..+++|
T Consensus 65 ---~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~--i~~--------~~~~~p 130 (205)
T PRK13582 65 ---ATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM--ITG--------YDLRQP 130 (205)
T ss_pred ---HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe--EEC--------cccccc
Confidence 4567899999999999987 5 9999999999999999999888866554332210 000 012222
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCe-eeCCcCchHHhHHHHHhcC
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADY-ALENVNNLPQVVPEIWVSQ 230 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~-~~~~~~el~~~l~~~~~~~ 230 (256)
.....++++++..++++++||||.+|+.+++.+|+++. ++... ....+++ +++++.+|.+.+......+
T Consensus 131 ~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~ 202 (205)
T PRK13582 131 DGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGIL-FRPPANVIAEFPQFPAVHTYDELLAAIDKASARA 202 (205)
T ss_pred chHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE-ECCCHHHHHhCCcccccCCHHHHHHHHHHHHhhc
Confidence 33455666666677899999999999999999998765 33332 1234554 8999999998887766543
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-20 Score=138.08 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=81.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCCh---------------HHHHHHHHhcCcccc--cceeE-ecccCCcccccCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADC--FDQII-CFETMNPNLSKATR 148 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~---------------~~~~~~l~~~gl~~~--f~~i~-~~~~~~~~~~~~~~ 148 (256)
.++||+.++|+.|+++|+ ++||... ..+...++++|+... |..+. +++..+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~------- 99 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSC------- 99 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCC-------
Confidence 689999999999999987 8999863 456778888888621 11111 1233332
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 149 PDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 149 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
.||+|++|.++++++++++++|++|||+..|+++|+++|+++++++++
T Consensus 100 -------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 100 -------RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred -------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 699999999999999999999999999999999999999999999764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-18 Score=137.11 Aligned_cols=103 Identities=18% Similarity=0.186 Sum_probs=90.1
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc---CcccccceeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
....++||+.++|+.|+++|+ |+||++...++..+++. ++.++|+.++.. ..+ .||+|
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g---------------~KP~p 155 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG---------------LKTEA 155 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc---------------cCCCH
Confidence 455799999999999999986 99999999888888886 677788877742 222 69999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN 205 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~ 205 (256)
+.|.++++++|++|+++++|||+..|+.+|+++|+.++++.++.+
T Consensus 156 ~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 156 QSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred HHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence 999999999999999999999999999999999999999977653
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-20 Score=142.99 Aligned_cols=104 Identities=19% Similarity=0.200 Sum_probs=91.8
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecC-ChHHHHHHHHhcCcc---------cccceeEecccCCcccccCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNS-DRNHAITCLKRLEIA---------DCFDQIICFETMNPNLSKATRPDEFP 153 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~-~~~~~~~~l~~~gl~---------~~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (256)
....++||+.++|+.|+++|+ ++||+ ....++..++.+++. ++|+.+++++....
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~------------ 109 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNK------------ 109 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCch------------
Confidence 456889999999999999986 99988 888889999999998 99999999887543
Q ss_pred CCCCCCHHHHHHHHHHc--CCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 154 VLLKPSMDAMKLALHVA--NVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~--~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
.||.+.+++.+.+.+ +++|++|+||||+..|+.+|+++|+.++++.++.
T Consensus 110 --~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 110 --AKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred --HHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 577777777777777 8999999999999999999999999999997764
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.5e-19 Score=128.83 Aligned_cols=95 Identities=22% Similarity=0.366 Sum_probs=82.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCC--------hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSD--------RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP 158 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp 158 (256)
.++||+.++|+.|+++|+ ++||+. ...++..++++++. ++.++.+. .. .||
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~--------------~KP 86 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC--------------RKP 86 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC--------------CCC
Confidence 678999999999999986 999998 78889999999986 34444433 22 799
Q ss_pred CHHHHHHHHHHc-CCCCCcEEEEcC-CccccHHHHHcCCeEEEEcC
Q 025190 159 SMDAMKLALHVA-NVDPRHALFLDD-NIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 159 ~~~~~~~~~~~~-~~~~~~~i~vGD-s~~Di~~a~~~G~~~v~v~~ 202 (256)
+|+.|.++++++ +++++++++||| +.+|+.+|+++|+.+|++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~ 132 (132)
T TIGR01662 87 KPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP 132 (132)
T ss_pred ChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence 999999999999 599999999999 68999999999999999863
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-19 Score=134.94 Aligned_cols=102 Identities=17% Similarity=0.306 Sum_probs=87.9
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCC---------------hHHHHHHHHhcCcccccceeE-e----cccCCcccc
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSD---------------RNHAITCLKRLEIADCFDQII-C----FETMNPNLS 144 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~---------------~~~~~~~l~~~gl~~~f~~i~-~----~~~~~~~~~ 144 (256)
.+.++||+.++|+.|+++|+ ++||.. ...+...++.+|+. |+.++ + +++...
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~--- 101 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC--- 101 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC---
Confidence 45889999999999999986 899963 45678889999996 77655 4 355544
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC
Q 025190 145 KATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN 205 (256)
Q Consensus 145 ~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~ 205 (256)
.||++..+..+++++++++++++||||+.+|+++|+++|+.++++.+++.
T Consensus 102 -----------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~~ 151 (161)
T TIGR01261 102 -----------RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEEL 151 (161)
T ss_pred -----------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhhc
Confidence 79999999999999999999999999999999999999999999987753
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.5e-18 Score=132.62 Aligned_cols=192 Identities=11% Similarity=0.098 Sum_probs=119.4
Q ss_pred eEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhcCCC
Q 025190 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLP 85 (256)
Q Consensus 6 k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (256)
++++||+||||++. .|.. +....|.............+..+......+.+. ...+.+.+...+
T Consensus 2 ~la~FDlD~TLi~~------~w~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~-~g~~~~~i~~~~----- 64 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWIA-----FAEKTGIDALKATTRDIPDYDVLMKQRLRILDE-HGLKLGDIQEVI----- 64 (203)
T ss_pred eEEEEeCCcccHHH------HHHH-----HHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHH-CCCCHHHHHHHH-----
Confidence 57999999999965 2443 455666532221110001111111111112221 145666665554
Q ss_pred CCCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 86 YDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
..++++||+.++++.|++.+. ++|++....++.+++++|++.+|...+..++.+ .++|.. ...++.+..+
T Consensus 65 -~~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g--~~tG~~-----~~~~~~K~~~ 136 (203)
T TIGR02137 65 -ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD--RVVGYQ-----LRQKDPKRQS 136 (203)
T ss_pred -HhCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--eeECee-----ecCcchHHHH
Confidence 345789999999999998754 999999999999999999988876322221101 011110 1134444444
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC-CCCC-eeeCCcCchHHhHHH
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV-GEAD-YALENVNNLPQVVPE 225 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~-~~~~-~~~~~~~el~~~l~~ 225 (256)
...+++.+. ++++||||.||+.+++.+|+++++...+... ..++ -++.++.||.+.+..
T Consensus 137 l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 137 VIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred HHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence 444455553 7999999999999999999999999876532 2333 456777777776644
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.1e-18 Score=134.20 Aligned_cols=97 Identities=16% Similarity=0.164 Sum_probs=81.3
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecC----ChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNS----DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPS 159 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~----~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~ 159 (256)
....+.+++.++|+.|+++|+ +|||. ....++.+++++|+..+|+.++++++... .||+
T Consensus 111 ~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~--------------~Kp~ 176 (237)
T TIGR01672 111 EFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQ--------------YQYT 176 (237)
T ss_pred cCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCC--------------CCCC
Confidence 455788889999999999986 89998 56678888999999999999988877653 5776
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 160 MDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
+. .+++++++ ++||||+.+|+.+|+++|+.++.+.++.
T Consensus 177 ~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~ 214 (237)
T TIGR01672 177 KT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRAS 214 (237)
T ss_pred HH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecC
Confidence 64 35667776 7999999999999999999999997654
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-17 Score=130.55 Aligned_cols=186 Identities=15% Similarity=0.079 Sum_probs=128.3
Q ss_pred CCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH--HhhhhHHHHHHcCCCCChhhHhhh
Q 025190 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFK--AYGSTLAGLRALGYDIGADDYHGF 79 (256)
Q Consensus 2 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 79 (256)
.++.++++||+||||++.. .+.. .....|....-.......... .+..............+.+.+...
T Consensus 2 ~~~~~L~vFD~D~TLi~~~-----~~~~-----~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~ 71 (212)
T COG0560 2 RRMKKLAVFDLDGTLINAE-----LIDE-----LARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEV 71 (212)
T ss_pred CCccceEEEecccchhhHH-----HHHH-----HHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4567899999999999921 2221 334445432211111111100 112222222333345566666665
Q ss_pred hhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCC
Q 025190 80 VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 80 ~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
..+. ..++||+.++++.+++.|. ++|++....++++.+.+|++..+...+..++ + .|+| ..-...+.+
T Consensus 72 ~~~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G--~ltG-~v~g~~~~~ 142 (212)
T COG0560 72 REEF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-G--KLTG-RVVGPICDG 142 (212)
T ss_pred HHhc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-C--EEec-eeeeeecCc
Confidence 5432 7899999999999999986 9999999999999999999988877666655 3 1222 122334456
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV 206 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~ 206 (256)
+-|...+..+++++|+++++++++|||.||+.|.+.+|.+.+..+.+...
T Consensus 143 ~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~ 192 (212)
T COG0560 143 EGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLR 192 (212)
T ss_pred chHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHH
Confidence 67789999999999999999999999999999999999999887766433
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.8e-17 Score=126.96 Aligned_cols=107 Identities=11% Similarity=0.066 Sum_probs=81.2
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCc--ccccCCCCC----CCCCCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP--NLSKATRPD----EFPVLLKP 158 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--~~~~~~~~~----~~~~~~Kp 158 (256)
..+++||+.++++.|+++|+ ++|++....++..++++++.++|+.+++++.... +.+.++... +....+.+
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 36899999999999999885 9999999999999999999999999987654221 011110000 11223445
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeE
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRT 197 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~ 197 (256)
|+..++++.+++ ++++++|||+.+|+++|+.+++-+
T Consensus 150 K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred HHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 678888888765 789999999999999999996544
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-17 Score=131.01 Aligned_cols=124 Identities=10% Similarity=0.102 Sum_probs=89.4
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc---ceeEecccCCcccccCCCCCCCCCCCCCCHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF---DQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f---~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
..+++||+.++++.|+++|+ |+|++....++.+++.++....+ +.++.++.... .||.|.
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~--------------~~p~~~ 133 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI--------------DWPHPC 133 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE--------------eCCCCC
Confidence 46899999999999999886 99999999999999987543333 22333222221 345444
Q ss_pred HH----------HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-----CCCCCCCeeeCCcCchHHhHHHH
Q 025190 162 AM----------KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-----VNVGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 162 ~~----------~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-----~~~~~~~~~~~~~~el~~~l~~~ 226 (256)
.+ ..++++++..+++++||||+.+|+++|+.+|+ +++... .....+...+.++.|+.+.|+++
T Consensus 134 ~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~ 211 (214)
T TIGR03333 134 DGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFYDVRKELENV 211 (214)
T ss_pred ccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHH
Confidence 32 35666777788899999999999999999998 333321 23344777788888888888765
Q ss_pred H
Q 025190 227 W 227 (256)
Q Consensus 227 ~ 227 (256)
+
T Consensus 212 ~ 212 (214)
T TIGR03333 212 K 212 (214)
T ss_pred h
Confidence 4
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-17 Score=122.61 Aligned_cols=114 Identities=24% Similarity=0.319 Sum_probs=93.1
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccc--cCCCCCCCCCCCCCCHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS--KATRPDEFPVLLKPSMD 161 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~--~~~~~~~~~~~~Kp~~~ 161 (256)
....++|++.++|+.|+++|+ ++|++....++..++.+++..+++.+++.+......- ...........+||++.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 567899999999999999875 9999999999999999999888888887766543100 00011122333499999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 162 AMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
.+..+++.++.+++++++|||+.+|+++++.+|+.++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 999999999999999999999999999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.8e-18 Score=128.40 Aligned_cols=93 Identities=17% Similarity=0.229 Sum_probs=79.1
Q ss_pred CChhHHHHHHhhhcCcE---EEecCChH------------HHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNSDRN------------HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~~~~------------~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
++||+.++|+.|+++|+ |+||.... .++.+++++|+. ++.+++++....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCC--------------
Confidence 68999999999999987 89997653 567889999985 356666554333
Q ss_pred CCCCHHHHHHHHHHcC--CCCCcEEEEcCCc--------cccHHHHHcCCeEEE
Q 025190 156 LKPSMDAMKLALHVAN--VDPRHALFLDDNI--------KNVTAGKALGLRTVL 199 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~--~~~~~~i~vGDs~--------~Di~~a~~~G~~~v~ 199 (256)
.||+|..+.+++++++ +++++++||||+. +|+++|+++|+.+++
T Consensus 107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 7999999999999999 9999999999996 699999999999875
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.8e-16 Score=121.93 Aligned_cols=105 Identities=15% Similarity=0.181 Sum_probs=80.7
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
..+.++||+.++++.++++|+ ++|++....++..++++|+..++...+..++.+ .+.+.........+..|+..+
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g--~~~g~~~~~~~~~~~~K~~~l 147 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG--LLTGPIEGQVNPEGECKGKVL 147 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC--EEeCccCCcccCCcchHHHHH
Confidence 345689999999999999986 999999999999999999988776655543322 111111011223456677899
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHc
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 193 (256)
..++++++++++++++||||.+|+++++.+
T Consensus 148 ~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 148 KELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 999999999999999999999999998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.4e-16 Score=122.45 Aligned_cols=129 Identities=13% Similarity=0.054 Sum_probs=94.2
Q ss_pred CCChhhHhhhhhcCCC-CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEec-ccCCcccc
Q 025190 70 DIGADDYHGFVHGRLP-YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICF-ETMNPNLS 144 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~-~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~-~~~~~~~~ 144 (256)
..+.+++.....+... .-...++||+.++++.++++|+ ++|++....++.+++++|++.+|...+.. ++ + .+
T Consensus 66 g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~-g--~~ 142 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESED-G--IY 142 (202)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCC-C--EE
Confidence 4566665554443221 1134789999999999999885 99999999999999999998777552221 21 1 11
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC
Q 025190 145 KATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 145 ~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~ 202 (256)
.|.- ....+.+++|...++.++++.++++++++++|||.+|+++++.+|..++..+.
T Consensus 143 ~g~~-~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 143 TGNI-DGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred eCCc-cCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence 1111 11234567888889999999999999999999999999999999988775543
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-16 Score=130.16 Aligned_cols=122 Identities=15% Similarity=0.149 Sum_probs=97.7
Q ss_pred CChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLAL 167 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~ 167 (256)
.++++.+.++.|+..+. ++||.+.......+..+|...+|+.+..+.... ....+||+|.+|..++
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~-----------~~~~gKP~p~~~~~~~ 189 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTK-----------ATVVGKPSKTFFLEAL 189 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCC-----------ceeecCCCHHHHHHHH
Confidence 46888899999987664 777877776666667778888887766543322 1223799999999999
Q ss_pred HHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC--------CCCCCCeeeCCcCchHHhH
Q 025190 168 HVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV--------NVGEADYALENVNNLPQVV 223 (256)
Q Consensus 168 ~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~--------~~~~~~~~~~~~~el~~~l 223 (256)
++++++++++++|||+. +|+.+|+++|+.++++.++. ....|+++++++.+|.++|
T Consensus 190 ~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 190 RATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred HHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 99999999999999997 89999999999999997663 1246899999998887765
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.6e-17 Score=133.66 Aligned_cols=119 Identities=22% Similarity=0.233 Sum_probs=89.1
Q ss_pred CCChhHHHHHHhhhcCcE--EEecCChHHH-HHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI--IFTNSDRNHA-ITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~--ivs~~~~~~~-~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
.-++++.+.++.|+++|. ++||.+.... ...+...+...+|+.+...... +....+||+|.++..+
T Consensus 143 ~~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~-----------~~~~~gKP~p~~~~~~ 211 (279)
T TIGR01452 143 FSYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGR-----------QPLVVGKPSPYMFECI 211 (279)
T ss_pred CCHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCC-----------ceeccCCCCHHHHHHH
Confidence 347899999999998775 8888765433 1223345665666654432111 1122479999999999
Q ss_pred HHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC--------------CCCCCeeeCCcCch
Q 025190 167 LHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN--------------VGEADYALENVNNL 219 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~--------------~~~~~~~~~~~~el 219 (256)
++++++++++++||||+. +||.+|+++|+.+++|.++.. ...|+++++++.+|
T Consensus 212 ~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 212 TENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred HHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 999999999999999996 999999999999999987632 13699999998764
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.5e-16 Score=131.11 Aligned_cols=100 Identities=16% Similarity=0.297 Sum_probs=83.7
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecC---------------ChHHHHHHHHhcCcccccceeEec-----ccCCccc
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNS---------------DRNHAITCLKRLEIADCFDQIICF-----ETMNPNL 143 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~---------------~~~~~~~~l~~~gl~~~f~~i~~~-----~~~~~~~ 143 (256)
....++||+.++|++|+++|+ |+||. ....+..+++.+++. |+.++.+ ++..
T Consensus 27 ~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~--- 101 (354)
T PRK05446 27 DKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCS--- 101 (354)
T ss_pred ccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCC---
Confidence 446899999999999999986 99994 244566678888884 6665543 3333
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC
Q 025190 144 SKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 144 ~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~ 202 (256)
.+||+|.++..+++++++++++++||||+.+|+++|+++|+++++++.
T Consensus 102 -----------~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 102 -----------CRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred -----------CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 379999999999999999999999999999999999999999999954
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.4e-17 Score=121.12 Aligned_cols=107 Identities=17% Similarity=0.225 Sum_probs=89.2
Q ss_pred HHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 025190 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (256)
Q Consensus 98 ~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 174 (256)
.+++|+++|+ |+||.....++..++++|+..+|+. .||++..+..+++++++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~-----------------------~~~k~~~~~~~~~~~~~~~ 92 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG-----------------------QSNKLIAFSDILEKLALAP 92 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec-----------------------ccchHHHHHHHHHHcCCCH
Confidence 7888998886 9999999999999999998877642 3778899999999999999
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeeeCCcCc---hHHhHHHHHh
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYALENVNN---LPQVVPEIWV 228 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~~~~~e---l~~~l~~~~~ 228 (256)
++|++|||+.+|+.+++.+|++ +.+.+. .....+++++.+... +.++++.++.
T Consensus 93 ~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~~ 150 (154)
T TIGR01670 93 ENVAYIGDDLIDWPVMEKVGLS-VAVADAHPLLIPRADYVTRIAGGRGAVREVCELLLL 150 (154)
T ss_pred HHEEEECCCHHHHHHHHHCCCe-EecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999998 444433 334668999987765 7777777664
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-15 Score=120.41 Aligned_cols=108 Identities=15% Similarity=0.167 Sum_probs=83.3
Q ss_pred hhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCC----hHHHHHHHHhcCc--ccccceeEecccCCccc
Q 025190 73 ADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSD----RNHAITCLKRLEI--ADCFDQIICFETMNPNL 143 (256)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~----~~~~~~~l~~~gl--~~~f~~i~~~~~~~~~~ 143 (256)
.+.++..+.+.. .....|+||+.++|+.|+++|+ +|||.. ....+.+++.+|+ .++|+.+++++..
T Consensus 98 ~~~fw~~y~~~~-~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~---- 172 (237)
T PRK11009 98 NQKFWEKMNNGW-DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP---- 172 (237)
T ss_pred hHHHHHHHHhcc-cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC----
Confidence 445555555432 3457899999999999999986 899963 4466777778999 7889888887643
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 144 SKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 144 ~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
.||++.. .++++++ +++|||+.+|+.+|+++|+.++.+.++.
T Consensus 173 ------------~K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~ 214 (237)
T PRK11009 173 ------------GQYTKTQ---WLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAA 214 (237)
T ss_pred ------------CCCCHHH---HHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCC
Confidence 4666543 5566776 8999999999999999999999997764
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.7e-15 Score=114.47 Aligned_cols=97 Identities=23% Similarity=0.255 Sum_probs=81.6
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCC-hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSD-RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~-~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
....++||+.++|+.|+++|+ ++||+. ...++.+++.+++..++ +. .||+|.+
T Consensus 40 ~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~--------------~KP~p~~ 96 (170)
T TIGR01668 40 DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA--------------VKPPGCA 96 (170)
T ss_pred CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC--------------CCCChHH
Confidence 445789999999999999875 999988 56667777777764221 11 6999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC
Q 025190 163 MKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV 206 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~ 206 (256)
|..++++++++++++++|||+. .|+.+|+++|+.++++.++...
T Consensus 97 ~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~ 141 (170)
T TIGR01668 97 FRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHP 141 (170)
T ss_pred HHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCC
Confidence 9999999999999999999998 7999999999999999877543
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.3e-15 Score=122.62 Aligned_cols=76 Identities=28% Similarity=0.374 Sum_probs=66.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC--------CCCCCeeeCCcCchH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN--------VGEADYALENVNNLP 220 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~~~~~~~~~~el~ 220 (256)
......+||.+.+++.++++++.+++++++|||++ +||.+|+++||.+++|..+.. ...|++++.++.++.
T Consensus 183 ~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~ 262 (269)
T COG0647 183 REPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELI 262 (269)
T ss_pred CcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHH
Confidence 34468899999999999999999999999999999 899999999999999987753 356899999988887
Q ss_pred HhHHH
Q 025190 221 QVVPE 225 (256)
Q Consensus 221 ~~l~~ 225 (256)
..++.
T Consensus 263 ~~~~~ 267 (269)
T COG0647 263 TALKE 267 (269)
T ss_pred hhhhc
Confidence 66543
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-15 Score=110.33 Aligned_cols=85 Identities=21% Similarity=0.253 Sum_probs=75.0
Q ss_pred CCChhHHHHHHhhhcCcE---EEecC-ChHHHHHHHHhcC-------cccccceeEecccCCcccccCCCCCCCCCCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNS-DRNHAITCLKRLE-------IADCFDQIICFETMNPNLSKATRPDEFPVLLKP 158 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~-~~~~~~~~l~~~g-------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp 158 (256)
.++||+.++|+.|+++|+ ++||+ ....+...++..+ +.++|+.+++++ .+|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~------------------~~p 90 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY------------------WLP 90 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC------------------CCc
Confidence 688999999999999987 89999 7888888899988 788888887753 367
Q ss_pred CHHHHHHHHHHcC--CCCCcEEEEcCCccccHHHHH
Q 025190 159 SMDAMKLALHVAN--VDPRHALFLDDNIKNVTAGKA 192 (256)
Q Consensus 159 ~~~~~~~~~~~~~--~~~~~~i~vGDs~~Di~~a~~ 192 (256)
+|..|..+++++| ++|++|++|||+..|+...++
T Consensus 91 kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 91 KSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 8899999999999 999999999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-16 Score=133.97 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=85.8
Q ss_pred HHHhhhc-CcE--EEecCChHH-HHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCC
Q 025190 98 LLCSITQ-RKI--IFTNSDRNH-AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD 173 (256)
Q Consensus 98 ~l~~l~~-~~~--ivs~~~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 173 (256)
....|+. .|. ++||.+... ....+...|...+|+.+..+.... ....+||+|.+|..++++++++
T Consensus 178 a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~-----------~~~~gKP~p~~~~~a~~~~~~~ 246 (311)
T PLN02645 178 ATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTERE-----------PLVVGKPSTFMMDYLANKFGIE 246 (311)
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCC-----------cccCCCChHHHHHHHHHHcCCC
Confidence 3445543 354 777776543 233345566666777666554432 1234799999999999999999
Q ss_pred CCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC----------CCCCCeeeCCcCchHHhHH
Q 025190 174 PRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN----------VGEADYALENVNNLPQVVP 224 (256)
Q Consensus 174 ~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~----------~~~~~~~~~~~~el~~~l~ 224 (256)
+++++||||++ +||.+|+++|+++++|.++.. ...|+++++++.+|.++++
T Consensus 247 ~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 247 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred cccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 99999999998 999999999999999976531 1468999999999877654
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.3e-15 Score=125.57 Aligned_cols=110 Identities=16% Similarity=0.084 Sum_probs=92.2
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc-ccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
....++||+.++++.|+++|+ ++|+......+..++++++.. +|+.+++.+.... |-. .....||+|..
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~--~~~-----~~~~~kp~p~~ 256 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMH--FQR-----EQGDKRPDDVV 256 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhh--hcc-----cCCCCCCcHHH
Confidence 344789999999999999986 999999999999999999987 8999888773110 000 00126999999
Q ss_pred HHHHHHHcCC-CCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 163 MKLALHVANV-DPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 163 ~~~~~~~~~~-~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
+..++++++. ++++|++|||+.+|+.+|+++|+.+++|.++
T Consensus 257 ~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 257 KEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred HHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 9999999988 6799999999999999999999999999765
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-16 Score=119.84 Aligned_cols=107 Identities=15% Similarity=0.188 Sum_probs=85.4
Q ss_pred HHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 025190 99 LCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175 (256)
Q Consensus 99 l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 175 (256)
+..|+++|+ ++|+.....++..++++|+..+|+. .||+|..+..++++++++++
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~-----------------------~kpkp~~~~~~~~~l~~~~~ 99 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG-----------------------IKKKTEPYAQMLEEMNISDA 99 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec-----------------------CCCCHHHHHHHHHHcCcCHH
Confidence 445555665 9999999999999999999877762 37888999999999999999
Q ss_pred cEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc---hHHhHHHHHh
Q 025190 176 HALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN---LPQVVPEIWV 228 (256)
Q Consensus 176 ~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e---l~~~l~~~~~ 228 (256)
++++|||+.+|+.+++.+|++.++.+.. ..+..++++..+-.+ +.++++.++.
T Consensus 100 ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il~ 156 (169)
T TIGR02726 100 EVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAELILK 156 (169)
T ss_pred HEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999887643 344567887754333 3455555553
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.4e-15 Score=119.12 Aligned_cols=88 Identities=23% Similarity=0.287 Sum_probs=75.9
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
..+++|++.++|+.|++.|+ ++|+.....+..+.+.+|+. +.++.+... +||.+.++.
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~---~~~v~a~~~----------------~kP~~k~~~ 185 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF---DSIVFARVI----------------GKPEPKIFL 185 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---SEEEEESHE----------------TTTHHHHHH
T ss_pred cCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---ccccccccc----------------ccccchhHH
Confidence 34789999999999999997 99999999999999999994 333332211 399999999
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcC
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALG 194 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G 194 (256)
.+++++++++++|+||||+.||+.+++++|
T Consensus 186 ~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 186 RIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred HHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 999999999999999999999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.60 E-value=7e-14 Score=110.63 Aligned_cols=175 Identities=21% Similarity=0.243 Sum_probs=114.0
Q ss_pred EEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH-----HHHHhhhhHHHHHHcCCCCChhhHhhhhh
Q 025190 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVE-----LFKAYGSTLAGLRALGYDIGADDYHGFVH 81 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (256)
+|+||+|+||+|.+.... +.+.++..... .++... +...+......+... ..+++++.+.+
T Consensus 2 LvvfDFD~TIvd~dsd~~----------v~~~l~~~~~~-~~l~~~~~~~~wt~~m~~vl~~L~~~--gvt~~~I~~~l- 67 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDDW----------VIELLPPEELP-EELRESYPKGGWTEYMDRVLQLLHEQ--GVTPEDIRDAL- 67 (234)
T ss_pred EEEEeCCCCccCCccHHH----------HHHhcCCcccH-HHHHHhccccchHHHHHHHHHHHHHc--CCCHHHHHHHH-
Confidence 589999999999876322 22334332110 111111 111122222223222 36777777764
Q ss_pred cCCCCCCCCCChhHHHHHHhhh--cCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCc-------ccccCCCC
Q 025190 82 GRLPYDLIKPDPQLRNLLCSIT--QRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP-------NLSKATRP 149 (256)
Q Consensus 82 ~~~~~~~~~~~pg~~~~l~~l~--~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~-------~~~~~~~~ 149 (256)
..+++.||+.++++.+. +.++ |+|++..-+++.+|++.|+...|+.|++....-. .-|-..+|
T Consensus 68 -----~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C 142 (234)
T PF06888_consen 68 -----RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGC 142 (234)
T ss_pred -----HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCC
Confidence 67899999999999994 4565 9999999999999999999999999888642211 01111333
Q ss_pred CC-CCCCCCCCHHHHHHHHHH---cCCCCCcEEEEcCCccccHHHHHcCCe-EEEEcC
Q 025190 150 DE-FPVLLKPSMDAMKLALHV---ANVDPRHALFLDDNIKNVTAGKALGLR-TVLVGK 202 (256)
Q Consensus 150 ~~-~~~~~Kp~~~~~~~~~~~---~~~~~~~~i~vGDs~~Di~~a~~~G~~-~v~v~~ 202 (256)
+. ....+| ...++++++. .|++..+++||||+.||+.++.+++-. .|+...
T Consensus 143 ~~C~~NmCK--~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~ 198 (234)
T PF06888_consen 143 SLCPPNMCK--GKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRK 198 (234)
T ss_pred CcCCCccch--HHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCC
Confidence 31 122344 4778888877 478889999999999999999998765 344433
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.3e-15 Score=119.36 Aligned_cols=66 Identities=21% Similarity=0.281 Sum_probs=57.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC------C--CCCCeeeCCcCch
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN------V--GEADYALENVNNL 219 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~------~--~~~~~~~~~~~el 219 (256)
..+||+|.+|+.+++.++++++++++|||+. +||.+|+++|++++++.++.. . ..|+++++++.++
T Consensus 175 ~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 175 YIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred ccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 3489999999999999999999999999997 899999999999999987642 1 4588888887653
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.1e-16 Score=114.75 Aligned_cols=94 Identities=15% Similarity=0.078 Sum_probs=82.9
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc-ccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
....++||+.++|+.|++ ++ |+|++....++.+++++++.. +|+.+++++++.. .||+
T Consensus 42 ~~v~l~pG~~e~L~~L~~-~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~--------------~KP~--- 103 (148)
T smart00577 42 VYVKKRPGVDEFLKRASE-LFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF--------------VKGK--- 103 (148)
T ss_pred EEEEECCCHHHHHHHHHh-ccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc--------------cCCe---
Confidence 345789999999999985 44 999999999999999999865 5699999988875 6885
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
|.+++++++++|++|++|||+.+|+.+++++|+.+-
T Consensus 104 ~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 889999999999999999999999999999988764
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.1e-14 Score=114.96 Aligned_cols=68 Identities=24% Similarity=0.290 Sum_probs=60.4
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC--------CCCCCeeeCCcCch
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN--------VGEADYALENVNNL 219 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~~~~~~~~~~el 219 (256)
....+||+|.++..++++++++++++++|||+. +|+.+|+++|+.++++.++.. +..|+++++++.++
T Consensus 169 ~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 169 PFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred ccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 344589999999999999999999999999998 899999999999999987642 25799999998876
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-14 Score=112.41 Aligned_cols=102 Identities=16% Similarity=0.241 Sum_probs=79.9
Q ss_pred HHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 025190 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (256)
Q Consensus 98 ~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 174 (256)
.++.|+++|+ ++|+.....+...++.+|+..+|+ + .++++..+..+++++|+++
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~--------g---------------~~~k~~~l~~~~~~~gl~~ 112 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ--------G---------------QSNKLIAFSDLLEKLAIAP 112 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec--------C---------------CCcHHHHHHHHHHHhCCCH
Confidence 4455555665 999999999999999999876664 1 4667799999999999999
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeC------CcCchHHhH
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALE------NVNNLPQVV 223 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~------~~~el~~~l 223 (256)
++++||||+.+|+.+++.+|+.++ +++.. ....+++++. .+.++.+.|
T Consensus 113 ~ev~~VGDs~~D~~~a~~aG~~~~-v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i 168 (183)
T PRK09484 113 EQVAYIGDDLIDWPVMEKVGLSVA-VADAHPLLLPRADYVTRIAGGRGAVREVCDLL 168 (183)
T ss_pred HHEEEECCCHHHHHHHHHCCCeEe-cCChhHHHHHhCCEEecCCCCCCHHHHHHHHH
Confidence 999999999999999999999955 54332 2356888886 455555443
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.8e-13 Score=101.18 Aligned_cols=103 Identities=13% Similarity=0.147 Sum_probs=84.1
Q ss_pred CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc--ccceeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 86 YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD--CFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
...+++.||+++++..|+++|. ++|++....+..+...+|++- .+...+--+..+ -|.|+..++++..+.-|+
T Consensus 84 ~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~G--k~~gfd~~~ptsdsggKa 161 (227)
T KOG1615|consen 84 KQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDG--KYLGFDTNEPTSDSGGKA 161 (227)
T ss_pred cCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCC--cccccccCCccccCCccH
Confidence 3577899999999999999986 999999999999999999974 343333333333 356677778888888888
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHH
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKA 192 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 192 (256)
+.+..+.+ +.+...++||||+.+|+++...
T Consensus 162 ~~i~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 162 EVIALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred HHHHHHHh--CCChheeEEecCCccccccCCc
Confidence 99998888 8888999999999999998776
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-13 Score=90.38 Aligned_cols=65 Identities=29% Similarity=0.445 Sum_probs=59.1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccccHHHHHcCCeEEEEcCCCC--------CCCCCeeeCCcCch
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDN-IKNVTAGKALGLRTVLVGKTVN--------VGEADYALENVNNL 219 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~G~~~v~v~~~~~--------~~~~~~~~~~~~el 219 (256)
.+||+|.++..++++++++++++++|||+ .+||.+|+++|+.+++|..+.. ...|+++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 37999999999999999999999999999 7999999999999999987642 25899999999875
|
... |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.2e-13 Score=105.18 Aligned_cols=180 Identities=12% Similarity=0.026 Sum_probs=102.7
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHH------------HHHcCCCC
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG------------LRALGYDI 71 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 71 (256)
..|+++||+||||++.+ +...+.. ++.++++++......... .+|..... +.......
T Consensus 5 ~~k~~iFD~DGTL~~~d--~~~~~~~----~~~~~~g~~~~~~~~~~~----~ig~~l~~~~~~~~~~~~~~~~~~~~g~ 74 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD--MFGSFLR----YLLRRQPLNLLLVLPLLP----VIGLGLLVKGRAARWPMSLLLWGCTFGH 74 (211)
T ss_pred cceEEEEecCCCCcccc--hHHHHHH----HHHHhcchhhHHHhHHHH----HhccCcccchhhhhhhHHHHHHHHHcCC
Confidence 56899999999999443 4444444 233566655333222211 11211100 11111122
Q ss_pred ChhhHh---hhhhcCCCCCCCCCChhHHHHH-HhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccc
Q 025190 72 GADDYH---GFVHGRLPYDLIKPDPQLRNLL-CSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS 144 (256)
Q Consensus 72 ~~~~~~---~~~~~~~~~~~~~~~pg~~~~l-~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~ 144 (256)
+.+++. +.+.+.+ .....++||+.+.| +.+++.|+ ++|++....++.+++.+|+.. .+.+++++-.. .|
T Consensus 75 ~~~~~~~~~~~f~~~~-~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~--~~ 150 (211)
T PRK11590 75 SEARLQALEADFVRWF-RDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQR--RY 150 (211)
T ss_pred CHHHHHHHHHHHHHHH-HHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEE--EE
Confidence 333332 2222212 12257799999999 57887774 999999999999999999632 33344443111 12
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 145 KATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 145 ~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
+| ......+++.-|...++.. ++.+...+.+.|||.+|+.+..-+|-+.+..+
T Consensus 151 tg-~~~g~~c~g~~K~~~l~~~---~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 151 GG-WVLTLRCLGHEKVAQLERK---IGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred cc-EECCccCCChHHHHHHHHH---hCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 22 1122233344444444433 46677788999999999999999997766443
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=7.2e-13 Score=100.16 Aligned_cols=121 Identities=18% Similarity=0.261 Sum_probs=88.0
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecC---------------ChHHHHHHHHhcCcccccceeEecccCCcccccCCCCC
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNS---------------DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~---------------~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
+...||+.+.+..|++.|+ ++||- ....+...++..|. -|+.++..-....
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~--------- 98 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPE--------- 98 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC---------
Confidence 3566788888888888886 78871 23334455666665 3676665433221
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-----CCCCCCeeeCCcCchH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-----NVGEADYALENVNNLP 220 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-----~~~~~~~~~~~~~el~ 220 (256)
+.-..+||++.++..+++++++++++.++|||+.+|+++|.++|++.+.+.++. .+...+++..++.++.
T Consensus 99 ~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 99 DNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred CCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 224568999999999999999999999999999999999999999977765442 1224567777766665
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-13 Score=113.57 Aligned_cols=71 Identities=10% Similarity=0.135 Sum_probs=57.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
+-.|+.+++++++.+|++++++++|||+.||++|++.+|+.+++-+.. ..+..|++++.+..+ +.++|+.+
T Consensus 197 ~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~ 270 (272)
T PRK10530 197 GNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSH 270 (272)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHH
Confidence 455779999999999999999999999999999999999977665432 234568999887766 66666654
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-13 Score=110.79 Aligned_cols=72 Identities=13% Similarity=0.172 Sum_probs=58.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
.+..|+.+++++++.+|++++++++|||+.||++|++.+|+.+++-+.. ..+..++++..+..+ +.+.|+.+
T Consensus 154 ~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~ 228 (230)
T PRK01158 154 PGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEHL 228 (230)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHHH
Confidence 4677889999999999999999999999999999999999988776543 344568888877665 55666544
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.7e-13 Score=113.82 Aligned_cols=88 Identities=17% Similarity=0.206 Sum_probs=80.1
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHh----cCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR----LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~----~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
.++||+.++|+.|+++|+ ++|++....+...+++ +++.++|+.+..+ .||+|..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-------------------~~pk~~~ 91 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-------------------WGPKSES 91 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-------------------cCchHHH
Confidence 358999999999999997 8999999999999999 8898899887553 5899999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCe
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLR 196 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~ 196 (256)
+..+++++|+.+++++||||+..|+..++.++..
T Consensus 92 i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 92 LRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred HHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 9999999999999999999999999999997654
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.4e-12 Score=111.08 Aligned_cols=96 Identities=17% Similarity=0.197 Sum_probs=75.5
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
...+++||+.+++++++++|. ++|++....++.+++++|+ ||.++++++... .||++..
T Consensus 69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~--------------~kg~~K~- 130 (479)
T PRK08238 69 ATLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTN--------------LKGAAKA- 130 (479)
T ss_pred hhCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccc--------------cCCchHH-
Confidence 445678999999999999986 9999999999999999997 899999887543 5554432
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
..+.+.++ .++++++||+.+|+++++.+| ..+.|+.+
T Consensus 131 ~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~ 167 (479)
T PRK08238 131 AALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGAS 167 (479)
T ss_pred HHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCC
Confidence 23445554 355899999999999999999 55566543
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=2e-13 Score=109.14 Aligned_cols=74 Identities=27% Similarity=0.379 Sum_probs=62.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC------------CCCCCeeeCCc
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN------------VGEADYALENV 216 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~------------~~~~~~~~~~~ 216 (256)
-.+...+||.+.++..++++++++|++++||||+. +||..++++|++++++..+.. ...|||.++++
T Consensus 217 R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l 296 (306)
T KOG2882|consen 217 RQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSL 296 (306)
T ss_pred CCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhH
Confidence 35688999999999999999999999999999999 799999999999999976542 23488888777
Q ss_pred CchHHhH
Q 025190 217 NNLPQVV 223 (256)
Q Consensus 217 ~el~~~l 223 (256)
.++...+
T Consensus 297 ~d~~~~~ 303 (306)
T KOG2882|consen 297 GDLLPLL 303 (306)
T ss_pred HHHhhhc
Confidence 6665443
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.5e-12 Score=108.01 Aligned_cols=71 Identities=17% Similarity=0.170 Sum_probs=58.8
Q ss_pred CCCCCCCHHHHHHHHHHc--------CC-----CCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC-------CCCCCCe
Q 025190 153 PVLLKPSMDAMKLALHVA--------NV-----DPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV-------NVGEADY 211 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~--------~~-----~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~-------~~~~~~~ 211 (256)
...+||++.+|+.+++.+ ++ ++++++||||++ +||.+|+++|+.+++|..+. ....|++
T Consensus 229 ~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~ 308 (321)
T TIGR01456 229 YTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTL 308 (321)
T ss_pred EEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCE
Confidence 567999999999988877 43 457999999999 99999999999999998752 1235899
Q ss_pred eeCCcCchHHhH
Q 025190 212 ALENVNNLPQVV 223 (256)
Q Consensus 212 ~~~~~~el~~~l 223 (256)
+++++.|+..+|
T Consensus 309 vv~~l~e~~~~i 320 (321)
T TIGR01456 309 IVNDVFDAVTKI 320 (321)
T ss_pred EECCHHHHHHHh
Confidence 999998887654
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-11 Score=100.20 Aligned_cols=115 Identities=11% Similarity=0.064 Sum_probs=82.6
Q ss_pred CCCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEe------cccC
Q 025190 69 YDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIIC------FETM 139 (256)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~------~~~~ 139 (256)
..++.+.+...+.+ ..+.+.||+.+|++.|+++|+ |+|++....++.+++++|+...+..+++ .+..
T Consensus 104 ~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGv 179 (277)
T TIGR01544 104 QAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGV 179 (277)
T ss_pred CCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCe
Confidence 34566666666532 578999999999999999987 9999999999999999998765655532 2222
Q ss_pred CcccccCCCCCCCCCCCCCCH-HHHHHHHHHcC--CCCCcEEEEcCCccccHHHHHc
Q 025190 140 NPNLSKATRPDEFPVLLKPSM-DAMKLALHVAN--VDPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 140 ~~~~~~~~~~~~~~~~~Kp~~-~~~~~~~~~~~--~~~~~~i~vGDs~~Di~~a~~~ 193 (256)
.. |. .+++.+.--|. ..+...++.++ .++++||+||||.+|+.||..+
T Consensus 180 lt----G~--~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 180 LK----GF--KGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred Ee----CC--CCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 11 10 01111111122 55667888888 8999999999999999998877
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.5e-12 Score=94.15 Aligned_cols=96 Identities=26% Similarity=0.449 Sum_probs=85.8
Q ss_pred CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHH
Q 025190 85 PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 85 ~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
.+.....-|.+.+.+.+++..|+ ++||+....+....+.+|+ +.++.+ .||-+.
T Consensus 41 ~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v----~fi~~A-------------------~KP~~~ 97 (175)
T COG2179 41 PWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV----PFIYRA-------------------KKPFGR 97 (175)
T ss_pred cccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC----ceeecc-------------------cCccHH
Confidence 35667888999999999999987 9999999999999999996 444442 799999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCC
Q 025190 162 AMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~ 203 (256)
.|.++++++++++++|++|||.. .|+.+++.+|+.++.|..-
T Consensus 98 ~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl 140 (175)
T COG2179 98 AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPL 140 (175)
T ss_pred HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEe
Confidence 99999999999999999999999 8999999999999999543
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2e-11 Score=93.27 Aligned_cols=208 Identities=12% Similarity=0.130 Sum_probs=126.6
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHH---HHHHHHHHHHHH-hhhhHHHHHHcCCCCChhhHhhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSET---KASSLRVELFKA-YGSTLAGLRALGYDIGADDYHGF 79 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 79 (256)
+..+++||+|-||+|.++..+ ..+.++.... ....+....+.. ++.....+.+ ....++++...
T Consensus 12 ~ril~~FDFD~TIid~dSD~w----------Vv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lhe--qgv~~~~ik~~ 79 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSDNW----------VVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHE--QGVRIAEIKQV 79 (256)
T ss_pred CcEEEEEecCceeecCCcchH----------HHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHH--cCCCHHHHHHH
Confidence 445789999999998876432 1122332211 111111111111 2222222222 23566666666
Q ss_pred hhcCCCCCCCCCChhHHHHHHhhhcCcE----EEecCChHHHHHHHHhcCcccccceeEecccCCc--------ccccCC
Q 025190 80 VHGRLPYDLIKPDPQLRNLLCSITQRKI----IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP--------NLSKAT 147 (256)
Q Consensus 80 ~~~~~~~~~~~~~pg~~~~l~~l~~~~~----ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~--------~~~~~~ 147 (256)
+ ..++..||+.++++.+++.|. |||+...-+++.+|+++|+.+.|+.|++.-.... .+-..+
T Consensus 80 ~------r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~h 153 (256)
T KOG3120|consen 80 L------RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQH 153 (256)
T ss_pred H------hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCC
Confidence 4 678899999999999999884 9999999999999999999999998887543211 000112
Q ss_pred CCC-CCCCCCCCCHHHHHHHHHH---cCCCCCcEEEEcCCccccHHHHHcCCeEEEE-cCCCC-----CC------CCCe
Q 025190 148 RPD-EFPVLLKPSMDAMKLALHV---ANVDPRHALFLDDNIKNVTAGKALGLRTVLV-GKTVN-----VG------EADY 211 (256)
Q Consensus 148 ~~~-~~~~~~Kp~~~~~~~~~~~---~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v-~~~~~-----~~------~~~~ 211 (256)
.|+ .+...+|- ..+.++... -|++.++.+||||+.||+.+.....-.-+.. ..+.. .. ..-.
T Consensus 154 sC~~CPsNmCKg--~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p~~~kasV~ 231 (256)
T KOG3120|consen 154 SCNLCPSNMCKG--LVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANPMLLKASVL 231 (256)
T ss_pred ccCcCchhhhhh--HHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCcceeeeeEE
Confidence 222 22233333 455555444 3788889999999999999888876554444 33321 11 1334
Q ss_pred eeCCcCchHHhHHHHHhcCC
Q 025190 212 ALENVNNLPQVVPEIWVSQS 231 (256)
Q Consensus 212 ~~~~~~el~~~l~~~~~~~~ 231 (256)
...+=.|+...|.+++....
T Consensus 232 ~W~sg~d~~~~L~~lik~~~ 251 (256)
T KOG3120|consen 232 EWSSGEDLERILQQLIKTIQ 251 (256)
T ss_pred ecccHHHHHHHHHHHHHHhh
Confidence 56666677777776665444
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.5e-12 Score=112.22 Aligned_cols=90 Identities=21% Similarity=0.268 Sum_probs=76.1
Q ss_pred CChhHHHHHHhhhcCcE---EEecCCh------------HHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNSDR------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~~~------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
++||+.+.|+.|++.|+ |+||... ..+..+++.+|+. |+.+++.+....
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~-------------- 261 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFY-------------- 261 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCC--------------
Confidence 57999999999999987 8898655 4577889999985 887777665543
Q ss_pred CCCCHHHHHHHHHHcC----CCCCcEEEEcCCccccHHHHHcCCe
Q 025190 156 LKPSMDAMKLALHVAN----VDPRHALFLDDNIKNVTAGKALGLR 196 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~----~~~~~~i~vGDs~~Di~~a~~~G~~ 196 (256)
+||+|.++.+++++++ +++++++||||+..|+.+++.+|-+
T Consensus 262 RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~~ 306 (526)
T TIGR01663 262 RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGKK 306 (526)
T ss_pred CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCCC
Confidence 7999999999999985 8999999999999999888777753
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.4e-11 Score=101.45 Aligned_cols=114 Identities=23% Similarity=0.275 Sum_probs=85.6
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc-C-------cccccceeEecccCCcccccCCCC-------C
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL-E-------IADCFDQIICFETMNPNLSKATRP-------D 150 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~-g-------l~~~f~~i~~~~~~~~~~~~~~~~-------~ 150 (256)
+.++||+.++|+.|+++|+ |+||+....++.+++.+ | +.++||.|+++..-. .-|...+. +
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP-~FF~~~~pf~~v~~~~ 261 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKP-GFFTEGRPFRQVDVET 261 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCC-cccCCCCceEEEeCCC
Confidence 5779999999999999986 99999999999999996 7 889999888766432 22322110 0
Q ss_pred CCCCCC-----CC----CHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHH-HcCCeEEEEcCC
Q 025190 151 EFPVLL-----KP----SMDAMKLALHVANVDPRHALFLDDNI-KNVTAGK-ALGLRTVLVGKT 203 (256)
Q Consensus 151 ~~~~~~-----Kp----~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~-~~G~~~v~v~~~ 203 (256)
...... ++ ...-...+.+.+++++++++||||+. .||..++ .+||.++++-..
T Consensus 262 g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE 325 (343)
T TIGR02244 262 GSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE 325 (343)
T ss_pred CcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence 001111 11 01236677888899999999999999 8999998 899999998654
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.1e-12 Score=102.64 Aligned_cols=77 Identities=8% Similarity=0.041 Sum_probs=63.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEIW 227 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~~ 227 (256)
+....+-.|..+++++++.+|++++++++|||+.||++|.+.+|.+.++-+.. ..+..|+++..+..+ +..+|+.++
T Consensus 189 eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 189 EILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred EEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 34455778889999999999999999999999999999999999988877643 345678999877655 666666553
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.1e-11 Score=89.55 Aligned_cols=200 Identities=13% Similarity=0.137 Sum_probs=118.0
Q ss_pred eEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHc--CCCCChhhHhhhhhcC
Q 025190 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL--GYDIGADDYHGFVHGR 83 (256)
Q Consensus 6 k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 83 (256)
-.|+.|+|||+.-.+.. . ++...+|.+... .+...+....-.....+.++ ....+.+++.+.+
T Consensus 4 ~vi~sDFDGTITl~Ds~-----~-----~itdtf~~~e~k--~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~l--- 68 (220)
T COG4359 4 PVIFSDFDGTITLNDSN-----D-----YITDTFGPGEWK--ALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFL--- 68 (220)
T ss_pred eEEEecCCCceEecchh-----H-----HHHhccCchHHH--HHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHH---
Confidence 34566999999755431 1 245666665443 22222222211111222111 1123345555554
Q ss_pred CCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce-eEecccCCcccccCC----CCCCCCCC
Q 025190 84 LPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ-IICFETMNPNLSKAT----RPDEFPVL 155 (256)
Q Consensus 84 ~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~-i~~~~~~~~~~~~~~----~~~~~~~~ 155 (256)
...+.+.||+++++++++++++ +||+|....+..+++.++=.+-.+. -+.++......=+.| .+...-.+
T Consensus 69 --lk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~ 146 (220)
T COG4359 69 --LKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGH 146 (220)
T ss_pred --HhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCC
Confidence 3567899999999999999986 9999999999999998763222211 111111111111111 11223334
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEE---EEcCCCCCCCCCeeeCCcCchHHhHHHHHh
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTV---LVGKTVNVGEADYALENVNNLPQVVPEIWV 228 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v---~v~~~~~~~~~~~~~~~~~el~~~l~~~~~ 228 (256)
.|| ..++ .+.-+++.++|+|||.+|+.+|+...+-++ +++...+++.+...+.++.|+..-++.++.
T Consensus 147 dK~--~vI~----~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~~L~nyc~eqn~~f~~fe~F~eIlk~iekvl~ 216 (220)
T COG4359 147 DKS--SVIH----ELSEPNESIFYCGDSVSDLSAAKLSDLLFAKDDLLNYCREQNLNFLEFETFYEILKEIEKVLE 216 (220)
T ss_pred Ccc--hhHH----HhhcCCceEEEecCCcccccHhhhhhhHhhHHHHHHHHHHcCCCCcccccHHHHHHHHHHHHh
Confidence 555 4444 444456679999999999999999876554 344555677778888888888777776653
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.1e-12 Score=104.88 Aligned_cols=98 Identities=13% Similarity=0.042 Sum_probs=69.1
Q ss_pred EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcccc
Q 025190 108 IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNV 187 (256)
Q Consensus 108 ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di 187 (256)
+.+....+.+...++.++.. +.. .++.. . -+....+.+|...++++++.+|++++++++|||+.||+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~-~---------~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi 178 (225)
T TIGR01482 112 MRYGIDVDTVREIIKELGLN--LVA-VDSGF-D---------IHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDI 178 (225)
T ss_pred EeecCCHHHHHHHHHhcCce--EEE-ecCCc-E---------EEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhH
Confidence 44555566667777777643 111 11110 0 02333467888999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc
Q 025190 188 TAGKALGLRTVLVGKT-VNVGEADYALENVNN 218 (256)
Q Consensus 188 ~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e 218 (256)
+|++.+|+.+++-+.. ..+..++++..+..+
T Consensus 179 ~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 179 DLFEVPGFGVAVANAQPELKEWADYVTESPYG 210 (225)
T ss_pred HHHHhcCceEEcCChhHHHHHhcCeecCCCCC
Confidence 9999999998877643 345668888776555
|
catalyze the same reaction as SPP. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.7e-11 Score=98.87 Aligned_cols=73 Identities=11% Similarity=0.059 Sum_probs=55.0
Q ss_pred CCCCCHHHHHHHHHHcCCCC-CcEEEEcCCccccHHHHHcCCeEEEEcCCCC-C----CCC-Ceee--CCcC--chHHhH
Q 025190 155 LLKPSMDAMKLALHVANVDP-RHALFLDDNIKNVTAGKALGLRTVLVGKTVN-V----GEA-DYAL--ENVN--NLPQVV 223 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~-~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-~----~~~-~~~~--~~~~--el~~~l 223 (256)
.+ .|...++++++.+|+++ +++++|||+.||++|++.+|+.+++-+.... + ..+ +.+. .+.. -+.+.|
T Consensus 188 ~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l 266 (273)
T PRK00192 188 GG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAI 266 (273)
T ss_pred CC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHH
Confidence 35 77789999999999999 9999999999999999999999998875432 2 223 4555 3322 255666
Q ss_pred HHHHh
Q 025190 224 PEIWV 228 (256)
Q Consensus 224 ~~~~~ 228 (256)
+.+++
T Consensus 267 ~~~~~ 271 (273)
T PRK00192 267 NKLLS 271 (273)
T ss_pred HHHHh
Confidence 66554
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.1e-10 Score=86.42 Aligned_cols=107 Identities=17% Similarity=0.174 Sum_probs=87.7
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc---CcccccceeEecccCCcccccCCCCCCCCCCCCCCHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
...+||++.+.+++-++.|+ |-|.++-..++-...+. .+..+|+..|.. ..+ .|....
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt-tiG---------------~KrE~~ 164 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT-TIG---------------KKRESQ 164 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec-ccc---------------ccccch
Confidence 45789999999999999987 88888888777776654 455677776654 223 588888
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCC
Q 025190 162 AMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEAD 210 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~ 210 (256)
-|.+++...|++|.+++++.|.++.+.+|+.+||.++.+.++...+-++
T Consensus 165 SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d 213 (229)
T COG4229 165 SYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPD 213 (229)
T ss_pred hHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCC
Confidence 9999999999999999999999999999999999999887765444333
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.3e-12 Score=96.13 Aligned_cols=99 Identities=21% Similarity=0.335 Sum_probs=71.2
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEec-CChHHHHHHHHhcCcc----------cccceeEecccCCcccccCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTN-SDRNHAITCLKRLEIA----------DCFDQIICFETMNPNLSKATRPDEF 152 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~-~~~~~~~~~l~~~gl~----------~~f~~i~~~~~~~~~~~~~~~~~~~ 152 (256)
..+.++|++.++|++|+.+|+ ++|. ...+.+++.|+.+++. ++|+..-. .
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI----~------------ 105 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEI----Y------------ 105 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEE----S------------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhhe----e------------
Confidence 567899999999999999998 6774 4667899999999999 66665322 1
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
...|..-|+.+.++.|++++++++++|-..++....+.|..++.+.+|.
T Consensus 106 ---~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Gl 154 (169)
T PF12689_consen 106 ---PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGL 154 (169)
T ss_dssp ---SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS-
T ss_pred ---cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCC
Confidence 2366688999999999999999999999999999999999999998864
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.8e-10 Score=90.88 Aligned_cols=107 Identities=7% Similarity=-0.052 Sum_probs=70.5
Q ss_pred CCCChhHHHHHH-hhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 89 IKPDPQLRNLLC-SITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 89 ~~~~pg~~~~l~-~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
..++||+.+.|+ .++++|. |||++....++.+.+..++... +.+++.+-- . ..+| ......+.+.-|...++
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le-~-~~gg-~~~g~~c~g~~Kv~rl~ 168 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIE-R-GNGG-WVLPLRCLGHEKVAQLE 168 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeE-E-eCCc-eEcCccCCChHHHHHHH
Confidence 468999999996 7887775 9999999999999988665332 233443311 0 0111 11222333444444444
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~ 202 (256)
..+ +.+...+.+.|||.+|+++...+|-+.+..++
T Consensus 169 ~~~---~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~ 203 (210)
T TIGR01545 169 QKI---GSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKR 203 (210)
T ss_pred HHh---CCChhheEEecCCcccHHHHHhCCCcEEECcc
Confidence 444 55667889999999999999999977664433
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.8e-11 Score=100.73 Aligned_cols=77 Identities=8% Similarity=0.024 Sum_probs=61.1
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCe--eeCCcCc--hHHhHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADY--ALENVNN--LPQVVPE 225 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~--~~~~~~e--l~~~l~~ 225 (256)
+....+-.|..+++++++.+|++++++++|||+.||++|.+.+|...++-+.. ..+..+++ ++.+..+ +..+|+.
T Consensus 181 eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~ 260 (272)
T PRK15126 181 EVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTH 260 (272)
T ss_pred EeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHH
Confidence 44455667889999999999999999999999999999999999988877643 33444554 6666555 7777877
Q ss_pred HH
Q 025190 226 IW 227 (256)
Q Consensus 226 ~~ 227 (256)
++
T Consensus 261 ~~ 262 (272)
T PRK15126 261 WL 262 (272)
T ss_pred Hh
Confidence 66
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.7e-12 Score=94.58 Aligned_cols=74 Identities=27% Similarity=0.376 Sum_probs=60.9
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC--------CCCCCCeeeCCcCchHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV--------NVGEADYALENVNNLPQ 221 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~--------~~~~~~~~~~~~~el~~ 221 (256)
+....+||+|..|+.+++.+|++|++++||||.. .|+-.|.++||..+.|..+. ....|+...+++-+..+
T Consensus 175 ~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd 254 (262)
T KOG3040|consen 175 EATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVD 254 (262)
T ss_pred eEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHH
Confidence 4456689999999999999999999999999999 57999999999999996542 12457778877776666
Q ss_pred hHH
Q 025190 222 VVP 224 (256)
Q Consensus 222 ~l~ 224 (256)
+|.
T Consensus 255 ~I~ 257 (262)
T KOG3040|consen 255 LII 257 (262)
T ss_pred HHH
Confidence 653
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.8e-12 Score=98.97 Aligned_cols=95 Identities=9% Similarity=0.069 Sum_probs=67.1
Q ss_pred EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcccc
Q 025190 108 IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNV 187 (256)
Q Consensus 108 ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di 187 (256)
+++......+...++..++..+... +.. +....+..|..+++++++.+|++++++++|||+.||+
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~~~~~~-~~~--------------ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 112 MREGKDVDEVREIIKERGLNLVDSG-FAI--------------HIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI 176 (215)
T ss_pred ecCCccHHHHHHHHHhCCeEEEecC-ceE--------------EEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 4455555666767777665432211 111 2222356777999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCC-CCCCCCCeeeCCcC
Q 025190 188 TAGKALGLRTVLVGKT-VNVGEADYALENVN 217 (256)
Q Consensus 188 ~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~ 217 (256)
+|++.+|+.+++.+.. ..+..++++..+..
T Consensus 177 ~ml~~ag~~vam~na~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 177 DLFRVVGFKVAVANADDQLKEIADYVTSNPY 207 (215)
T ss_pred HHHHhCCCeEEcCCccHHHHHhCCEEcCCCC
Confidence 9999999998877643 34456788876543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.1e-11 Score=97.21 Aligned_cols=77 Identities=6% Similarity=0.048 Sum_probs=60.5
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-CCCCCC--eeeCCcCc--hHHhHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-NVGEAD--YALENVNN--LPQVVPE 225 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-~~~~~~--~~~~~~~e--l~~~l~~ 225 (256)
+....+-.|..+++++++.+|++++++++|||+.||++|.+.+|.+.++-+... .+..++ +++.+..+ +...|+.
T Consensus 183 eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 183 EVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred EEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 444556778899999999999999999999999999999999999988776543 344454 67776655 6666665
Q ss_pred HH
Q 025190 226 IW 227 (256)
Q Consensus 226 ~~ 227 (256)
++
T Consensus 263 ~~ 264 (266)
T PRK10976 263 LY 264 (266)
T ss_pred Hh
Confidence 43
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.6e-11 Score=97.86 Aligned_cols=77 Identities=9% Similarity=0.112 Sum_probs=61.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEIW 227 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~~ 227 (256)
+....+..|..+++++++++|++++++++|||+.||++|.+.+|.+.++-+.. ..+..++++..+..+ +...|+.++
T Consensus 182 ei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~ 261 (264)
T COG0561 182 DITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLL 261 (264)
T ss_pred EEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHh
Confidence 44556788999999999999999999999999999999999999998887753 344556666566555 555665543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.3e-11 Score=99.82 Aligned_cols=96 Identities=23% Similarity=0.252 Sum_probs=79.2
Q ss_pred ChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCccccccee--EecccCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 025190 92 DPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQI--ICFETMNPNLSKATRPDEFPVLLKPSMDAMKLAL 167 (256)
Q Consensus 92 ~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i--~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~ 167 (256)
+|++.++++.|+++|+ ++||.+.......+..++...++..+ .+.+... .+||+|.+|+.++
T Consensus 140 ~~~~~~~l~~l~~~g~~~i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~--------------~gKP~~~~~~~~~ 205 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPNICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIY--------------SGKPYPAIFHKAL 205 (242)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCEeccCCCceEecccHHHHHHHHhCCcEec--------------CCCCCHHHHHHHH
Confidence 6899999999888776 88999888777677777777666654 3443322 3899999999999
Q ss_pred HHcCCC-CCcEEEEcCCc-cccHHHHHcCCeEEEEc
Q 025190 168 HVANVD-PRHALFLDDNI-KNVTAGKALGLRTVLVG 201 (256)
Q Consensus 168 ~~~~~~-~~~~i~vGDs~-~Di~~a~~~G~~~v~v~ 201 (256)
++++.. ++++++|||+. +|+.+|+++|+.+++|.
T Consensus 206 ~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 206 KECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred HHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 999975 67999999995 99999999999999884
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.5e-11 Score=96.15 Aligned_cols=51 Identities=27% Similarity=0.435 Sum_probs=46.5
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcE-EEEcCCc-cccHHHHHcCCeEEEEcCC
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHA-LFLDDNI-KNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~-i~vGDs~-~Di~~a~~~G~~~v~v~~~ 203 (256)
...+||++.+|+.++++++++++++ ++|||+. +||.+|+++|++++++.++
T Consensus 184 ~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 184 TVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 3578999999999999999988887 9999999 8999999999999998653
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.3e-10 Score=91.70 Aligned_cols=83 Identities=12% Similarity=0.166 Sum_probs=64.2
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChH---HHHHHHHhcCccccc-ceeEecccCCcccccCCCCCCCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFPVLLKPS 159 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~---~~~~~l~~~gl~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~ 159 (256)
....++||+.++++.|+++|+ ++||+... .....|+.+|+...+ +.++..++ .++|
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~-----------------~~~K 177 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD-----------------KSSK 177 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC-----------------CCCc
Confidence 456789999999999999986 89998643 445788889997643 55655432 3566
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCccccHHH
Q 025190 160 MDAMKLALHVANVDPRHALFLDDNIKNVTAG 190 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a 190 (256)
+..+..+.+.+++ +++|||+.+|+..+
T Consensus 178 ~~rr~~I~~~y~I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 178 ESRRQKVQKDYEI----VLLFGDNLLDFDDF 204 (266)
T ss_pred HHHHHHHHhcCCE----EEEECCCHHHhhhh
Confidence 6888888887777 89999999999654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1e-11 Score=89.89 Aligned_cols=92 Identities=21% Similarity=0.319 Sum_probs=72.1
Q ss_pred HHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 025190 99 LCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175 (256)
Q Consensus 99 l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 175 (256)
++.|.+.|+ |+|+..++.++...+.+|+..++..+ +.|...++.+++++++.++
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG~-----------------------~dK~~a~~~L~~~~~l~~e 100 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGI-----------------------SDKLAAFEELLKKLNLDPE 100 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeech-----------------------HhHHHHHHHHHHHhCCCHH
Confidence 344455555 99999999999999999987655443 5666999999999999999
Q ss_pred cEEEEcCCccccHHHHHcCCeEEEEcC-CCCCCCCCeee
Q 025190 176 HALFLDDNIKNVTAGKALGLRTVLVGK-TVNVGEADYAL 213 (256)
Q Consensus 176 ~~i~vGDs~~Di~~a~~~G~~~v~v~~-~~~~~~~~~~~ 213 (256)
++.||||..+|+...+++|+.++.... +.....++++.
T Consensus 101 ~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt 139 (170)
T COG1778 101 EVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVT 139 (170)
T ss_pred HhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhh
Confidence 999999999999999999998774432 22233445543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.1e-10 Score=94.26 Aligned_cols=87 Identities=16% Similarity=0.055 Sum_probs=72.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHH--HHHHhcCccc-ccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAI--TCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~--~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.++||+.++|++|+++|+ ++||+...... ..++++|+.. +|+.|++++.... ..+
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~-------------------~~l 84 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV-------------------QMI 84 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH-------------------HHH
Confidence 568999999999999886 99998777665 7899999987 8999998765432 467
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGL 195 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~ 195 (256)
.++++++++++.++++|||+..|+.....+|.
T Consensus 85 ~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 85 LESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred HhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 77778888999999999999999988876654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.9e-11 Score=91.63 Aligned_cols=92 Identities=18% Similarity=0.201 Sum_probs=61.5
Q ss_pred hhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCC---CCHHHHHHH
Q 025190 93 PQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLK---PSMDAMKLA 166 (256)
Q Consensus 93 pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~K---p~~~~~~~~ 166 (256)
|++.++++.+++.|+ |+|++....++.+++.+|+... .+++++..... +....... .+. -|...++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~--~v~~~~~~~~~---~~~~~~~~-~~~~~~~K~~~l~~~ 165 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD--NVIGNELFDNG---GGIFTGRI-TGSNCGGKAEALKEL 165 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG--GEEEEEEECTT---CCEEEEEE-EEEEESHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce--EEEEEeeeecc---cceeeeeE-CCCCCCcHHHHHHHH
Confidence 777799999998886 9999999999999999998742 12222210000 00000000 000 155777777
Q ss_pred ---HHHcCCCCCcEEEEcCCccccHHHH
Q 025190 167 ---LHVANVDPRHALFLDDNIKNVTAGK 191 (256)
Q Consensus 167 ---~~~~~~~~~~~i~vGDs~~Di~~a~ 191 (256)
... +.+..++++||||.+|+.+++
T Consensus 166 ~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 166 YIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 445 888999999999999999875
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.4e-09 Score=97.19 Aligned_cols=76 Identities=13% Similarity=0.112 Sum_probs=61.6
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
+....+-.|..+++++++.+|++++++++|||+.||++|.+.+|.++++-+.. ..+..++++..+..+ +..+|+.+
T Consensus 500 EI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~ 578 (580)
T PLN02887 500 EIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRY 578 (580)
T ss_pred EEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHh
Confidence 33444677889999999999999999999999999999999999998877644 345678999877665 55555544
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.8e-10 Score=90.59 Aligned_cols=77 Identities=9% Similarity=0.008 Sum_probs=59.5
Q ss_pred CCCCCCCCCHHHHHHHHHHcCC---CCCcEEEEcCCccccHHHHHcCCeEEEEcCC-C------CCCCCCeeeCCcCc--
Q 025190 151 EFPVLLKPSMDAMKLALHVANV---DPRHALFLDDNIKNVTAGKALGLRTVLVGKT-V------NVGEADYALENVNN-- 218 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~---~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~------~~~~~~~~~~~~~e-- 218 (256)
+.+..+-.|..+++++++.+|+ +++++++|||+.||++|.+.+|.++++-+.. . .+..++++......
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g 259 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEG 259 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHH
Confidence 4455577888999999999999 9999999999999999999999988887432 1 22357777776653
Q ss_pred hHHhHHHHH
Q 025190 219 LPQVVPEIW 227 (256)
Q Consensus 219 l~~~l~~~~ 227 (256)
+.+.|+.++
T Consensus 260 ~~~~l~~~~ 268 (271)
T PRK03669 260 WREGLDHFF 268 (271)
T ss_pred HHHHHHHHH
Confidence 555555544
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.4e-10 Score=88.27 Aligned_cols=44 Identities=14% Similarity=0.015 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEE
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVL 199 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~ 199 (256)
+-.|+.+++++++.+|++++++++|||+.||++|.+.+|.+++.
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 44566889999999999999999999999999999999988763
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.1e-09 Score=79.83 Aligned_cols=73 Identities=27% Similarity=0.348 Sum_probs=55.3
Q ss_pred EEecC-------ChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCC-----CCC
Q 025190 108 IFTNS-------DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANV-----DPR 175 (256)
Q Consensus 108 ivs~~-------~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~-----~~~ 175 (256)
||||+ ....++.+-+.+|+. .+... ..|| ..+..+++.++. +|+
T Consensus 82 IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~------------------~kKP--~~~~~i~~~~~~~~~~~~p~ 137 (168)
T PF09419_consen 82 IVSNSAGSSDDPDGERAEALEKALGIP----VLRHR------------------AKKP--GCFREILKYFKCQKVVTSPS 137 (168)
T ss_pred EEECCCCcccCccHHHHHHHHHhhCCc----EEEeC------------------CCCC--ccHHHHHHHHhhccCCCCch
Confidence 99998 366677777888853 21110 0466 666777777654 499
Q ss_pred cEEEEcCCc-cccHHHHHcCCeEEEEcCCC
Q 025190 176 HALFLDDNI-KNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 176 ~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~ 204 (256)
++++|||.+ .|+.+|+.+|+.++|+..+.
T Consensus 138 eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 138 EIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred hEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 999999999 89999999999999998764
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.1e-09 Score=82.42 Aligned_cols=91 Identities=21% Similarity=0.262 Sum_probs=62.3
Q ss_pred ChhHHHHHHhhhcCcE---EEecC---Ch-----------HHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 92 DPQLRNLLCSITQRKI---IFTNS---DR-----------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 92 ~pg~~~~l~~l~~~~~---ivs~~---~~-----------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
.|++.+.|++|.+.|+ |+||- .. ..+..+++.+++. + .++.+.... .
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~-~~~~a~~~d-------------~ 94 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I-QVYAAPHKD-------------P 94 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E-EEEECGCSS-------------T
T ss_pred chhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e-EEEecCCCC-------------C
Confidence 3579999999999997 88874 11 3344456666665 3 334333222 2
Q ss_pred CCCCCHHHHHHHHHHcCC----CCCcEEEEcCC-----------ccccHHHHHcCCeEE
Q 025190 155 LLKPSMDAMKLALHVANV----DPRHALFLDDN-----------IKNVTAGKALGLRTV 198 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~----~~~~~i~vGDs-----------~~Di~~a~~~G~~~v 198 (256)
.+||.+.++..+++.++. +.++++||||. -.|..-|.++|+++.
T Consensus 95 ~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 95 CRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred CCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 599999999999999874 88999999996 468999999999753
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.5e-09 Score=88.42 Aligned_cols=68 Identities=13% Similarity=0.138 Sum_probs=54.8
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN 218 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e 218 (256)
+....+-.|..+++++++.++++++++++|||+.||++|++.+|+.+++.+.. ..+..+++++.+..+
T Consensus 181 eI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 181 EITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNE 249 (256)
T ss_pred EecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCC
Confidence 34445677889999999999999999999999999999999999988775432 234557888776544
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.2e-09 Score=85.15 Aligned_cols=68 Identities=18% Similarity=0.177 Sum_probs=56.2
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN 218 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e 218 (256)
+....+-.|..+++++++.+|++++++++|||+.||++|.+.+|...++-+.. ..+..+++++.+..+
T Consensus 179 ei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 179 EITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp EEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTC
T ss_pred EEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCC
Confidence 34555667889999999999999999999999999999999999887766543 344668888888777
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.1e-09 Score=84.36 Aligned_cols=50 Identities=22% Similarity=0.504 Sum_probs=46.0
Q ss_pred ChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCc
Q 025190 92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP 141 (256)
Q Consensus 92 ~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~ 141 (256)
.||+.++|++|+++|+ ++|++....+...++.+|+..+|+.++++++...
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 4789999999999986 9999999999999999999999999999988765
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.4e-09 Score=95.60 Aligned_cols=110 Identities=16% Similarity=0.283 Sum_probs=82.8
Q ss_pred CCCChhHHHHHHhhhcCc-E---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRK-I---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~-~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
..++||+.+++++|+++| + ++|+.....++.+++++|++++|..+. +++|+..++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~---------------------p~~K~~~v~ 441 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL---------------------PEDKLAIVK 441 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC---------------------HHHHHHHHH
Confidence 478999999999999998 6 999999999999999999987765431 233344444
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeC--CcCchHHhH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALE--NVNNLPQVV 223 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~--~~~el~~~l 223 (256)
. ++..+++|+||||+.+|+.+++++|+.+.+-+.. .....+|+++. ++..+.+.+
T Consensus 442 ~----l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 442 E----LQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred H----HHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 4 4445679999999999999999999766554211 12346888887 566666554
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.4e-09 Score=84.41 Aligned_cols=72 Identities=10% Similarity=-0.050 Sum_probs=55.0
Q ss_pred CCCCCCHHHHHHHHHHcCCC--CCcEEEEcCCccccHHHHHcCCeEEEEcCC----CCCCC--C-CeeeCCcCc--hHHh
Q 025190 154 VLLKPSMDAMKLALHVANVD--PRHALFLDDNIKNVTAGKALGLRTVLVGKT----VNVGE--A-DYALENVNN--LPQV 222 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~--~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~----~~~~~--~-~~~~~~~~e--l~~~ 222 (256)
..+-.|..+++++++.++++ .+++++|||+.||++|.+.+|.++++-+.. ..+.. + +++..+..+ +.+.
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~ 251 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREA 251 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHH
Confidence 34667889999999999999 999999999999999999999999888754 23333 3 477655443 4444
Q ss_pred HHH
Q 025190 223 VPE 225 (256)
Q Consensus 223 l~~ 225 (256)
|+.
T Consensus 252 l~~ 254 (256)
T TIGR01486 252 LEH 254 (256)
T ss_pred HHH
Confidence 443
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.1e-08 Score=79.73 Aligned_cols=169 Identities=16% Similarity=0.151 Sum_probs=89.9
Q ss_pred eE-EEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhc
Q 025190 6 NC-LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFS--ETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHG 82 (256)
Q Consensus 6 k~-viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (256)
|+ |++|+||||.|....+... +.+.++.. ....+.........+|.. .....+.+...+.+
T Consensus 2 ~i~I~iDiDgVLad~~~~~~~~--------~n~~~~~~~~~~~~~~~~~~~~~~~g~~--------~~e~~~~~~~~~~~ 65 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFNSAFIEW--------FNEEFGKNPELTPEDITGYWDWEKWGIT--------EPEFYEKLWRFYEE 65 (191)
T ss_dssp -EEEEEESBTTTB-HHHHHHHH--------HHHHTTTS----GGGGTSSSHHHHHHHH--------STTHHHHHHHHHTS
T ss_pred CcEEEEECCCCCcccHHHHHHH--------HHHHcCCCCCCCHHHhhhhhHHHHhCCC--------CHHHHHHHHHHHhC
Confidence 45 8999999999886543333 33455554 111110000011111110 01112233333433
Q ss_pred CCCCCCCCCChhHHHHHHhhhcCc--E-EEecCChH-------HHHHHHHh-cCcccccceeEecccCCcccccCCCCCC
Q 025190 83 RLPYDLIKPDPQLRNLLCSITQRK--I-IFTNSDRN-------HAITCLKR-LEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 83 ~~~~~~~~~~pg~~~~l~~l~~~~--~-ivs~~~~~-------~~~~~l~~-~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
.-.+..++|.||+.+.|++|.+.| . ++|..... .....+++ ++...+-+.+++.
T Consensus 66 ~~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~--------------- 130 (191)
T PF06941_consen 66 PGFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTG--------------- 130 (191)
T ss_dssp TTTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEES---------------
T ss_pred hhhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEec---------------
Confidence 333678899999999999999997 2 56655332 22334444 3432233444442
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCC-CCeeeCCcCchHHhH
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGE-ADYALENVNNLPQVV 223 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~-~~~~~~~~~el~~~l 223 (256)
.|. ..+. -++|+|++.++..+...|++++++..+.+... .-..+.++.|+.+++
T Consensus 131 ----~K~----------~v~~----DvlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv~~W~ei~~~i 185 (191)
T PF06941_consen 131 ----DKT----------LVGG----DVLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRVNNWEEIEDLI 185 (191)
T ss_dssp ----SGG----------GC------SEEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE-STTSHHHHH
T ss_pred ----CCC----------eEec----cEEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccCCCHHHHHHHH
Confidence 121 1122 28999999999999999999999987765533 478899999988776
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.82 E-value=7.3e-09 Score=93.00 Aligned_cols=110 Identities=17% Similarity=0.275 Sum_probs=85.2
Q ss_pred CCCChhHHHHHHhhhcCcE----EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI----IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~----ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
.+++||+.+.++.|+++|+ ++|+.....++..++++|++++|..+. +.+|.
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~---------------------p~~K~---- 415 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL---------------------PEDKL---- 415 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC---------------------cHHHH----
Confidence 4789999999999999876 899999999999999999987765431 23333
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeee--CCcCchHHhH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~--~~~~el~~~l 223 (256)
.++++++...++++||||+.||+.+++.+|+...+-..+ .....+|+++ +++.+|.+.+
T Consensus 416 ~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 416 EIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 355555555689999999999999999999865554222 2235689988 8888887755
|
. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.7e-08 Score=76.59 Aligned_cols=111 Identities=19% Similarity=0.169 Sum_probs=81.8
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChH---------------HHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRN---------------HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~---------------~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
.+.|.+.++++.|++.|+ +||=++.+ .++..++..+-+--...+++....-+ ....--.
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w---~~p~~y~ 151 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFW---QEPSDYR 151 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCccc---CChhhhh
Confidence 467899999999999987 77766553 45666666654433455554332211 1111112
Q ss_pred CCCCCCCCHHH--H--HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 152 FPVLLKPSMDA--M--KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 152 ~~~~~Kp~~~~--~--~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
.....||+|.. | +++++++|++|+++++|+|+..++++|+++|+.++.+..+
T Consensus 152 ~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 152 PLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred hhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 34568999999 8 9999999999999999999999999999999999988654
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.1e-07 Score=77.17 Aligned_cols=51 Identities=16% Similarity=0.156 Sum_probs=43.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
...+.+|..+++++++.++++++++++|||+.||++|++.++..++.+.+.
T Consensus 162 ~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 162 LPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred EeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 444789999999999999999999999999999999999966566666543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=7.2e-08 Score=78.29 Aligned_cols=95 Identities=23% Similarity=0.305 Sum_probs=67.7
Q ss_pred ChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccC-----------------CCCCC
Q 025190 92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA-----------------TRPDE 151 (256)
Q Consensus 92 ~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~-----------------~~~~~ 151 (256)
.|++.++|++|+++|+ ++|++....+...++.+|+..+|+.++++++........ .+...
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~ 229 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTD 229 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCc
Confidence 3789999999999986 899999999999999999999999999988865432100 00010
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCc-EEEEcCCc-ccc
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRH-ALFLDDNI-KNV 187 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~-~i~vGDs~-~Di 187 (256)
....+| +|..+.+.+++.|++.-. +-.|+|=. ||+
T Consensus 230 ~~~lPK-SprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 230 VKNLPK-SPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred ccCCCC-CCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 011122 357788889999987544 44777766 443
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.69 E-value=7.3e-08 Score=86.99 Aligned_cols=109 Identities=18% Similarity=0.271 Sum_probs=81.0
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
.+++||+.++++.|+++|+ ++|+.....++.+++++|++ ++. + .. +++|+..+++
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-----~~~-~-~~---------------p~~K~~~v~~ 461 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-----VRA-E-VL---------------PDDKAALIKE 461 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----EEc-c-CC---------------hHHHHHHHHH
Confidence 4789999999999999987 89999999999999999995 222 1 11 2344454444
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC-CCCCCCCCeee--CCcCchHHhH
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK-TVNVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~-~~~~~~~~~~~--~~~~el~~~l 223 (256)
+. .++++|+||||+.||+.+++++|+...+-.. ......+|+++ +++.+|.+++
T Consensus 462 l~----~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 462 LQ----EKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred HH----HcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 43 3678999999999999999999986554421 12235688888 4777776654
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.7e-07 Score=64.98 Aligned_cols=115 Identities=8% Similarity=0.089 Sum_probs=92.6
Q ss_pred CCCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
....+|+.+.+.+++|+..- + |+|+.....+.+.++..|+. .+.++. -.++..-.
T Consensus 27 tgGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a---------------------~a~~e~K~ 83 (152)
T COG4087 27 TGGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFA---------------------GADPEMKA 83 (152)
T ss_pred cCcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeec---------------------ccCHHHHH
Confidence 35689999999999999872 2 88888888999999999976 455554 33446777
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC----CCCCeeeCCcCchHHhHH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV----GEADYALENVNNLPQVVP 224 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~----~~~~~~~~~~~el~~~l~ 224 (256)
.++++++-+.+.|++|||+.||+.+.+.+.++.+-+...... ..+|+++.++.|+.+++.
T Consensus 84 ~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~ 147 (152)
T COG4087 84 KIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147 (152)
T ss_pred HHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhh
Confidence 899999888899999999999999999999988877653322 468999999888887764
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.6e-08 Score=76.48 Aligned_cols=97 Identities=13% Similarity=0.099 Sum_probs=81.6
Q ss_pred CCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCccc-ccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
.+...||+.+||+.|++.. + |.|++....++.+++.++... +|+.+++.+.+.. .+++ +.
T Consensus 40 ~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~--------------~~~~---~~ 102 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVF--------------TNGK---YV 102 (162)
T ss_pred EEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE--------------eCCC---EE
Confidence 4567899999999998872 2 999999999999999999876 8898888877653 3453 56
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
+.++.+|.+++++|+|||++.++.++..+|+.+....
T Consensus 103 K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 103 KDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred eEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC
Confidence 7788889999999999999999999999998876554
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.1e-06 Score=69.43 Aligned_cols=96 Identities=14% Similarity=0.079 Sum_probs=60.8
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHH---HHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCC--
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNH---AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP-- 158 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp-- 158 (256)
...++.|++.++++.|+++|+ ++|+..... +...|...|+..+ +.++....... .|+
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~--------------~~~~~ 181 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDS--------------NKTVV 181 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCC--------------CchHh
Confidence 566899999999999999997 889987655 6677888898765 55554321111 232
Q ss_pred --CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 159 --SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 159 --~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
|.....++.+ -|. .=+..|||..+|+... .+|.++.-.+
T Consensus 182 ~yKs~~R~~l~~-~GY--rIv~~iGDq~sDl~G~-~~~~RtFKLP 222 (229)
T TIGR01675 182 TYKSEVRKSLME-EGY--RIWGNIGDQWSDLLGS-PPGRRTFKLP 222 (229)
T ss_pred HHHHHHHHHHHh-CCc--eEEEEECCChHHhcCC-CccCceeeCC
Confidence 1122222222 222 2267999999999653 4554555443
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.9e-07 Score=88.54 Aligned_cols=134 Identities=12% Similarity=0.184 Sum_probs=96.8
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCccccc--CCCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK--ATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~--~~~~~~~~~~~Kp~~~~~~ 164 (256)
++.||+.+.++.|++.|+ ++|+.....+..+.+.+|+...++.++++++.....-. .........+++..|+--.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~ 607 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKM 607 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHH
Confidence 789999999999999997 89999999999999999998777666665544210000 0000011233456667777
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeee--CCcCchHHhH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~--~~~~el~~~l 223 (256)
.+.+.++-..+.+.|+||+.||..++++++++..+-..+. .+..+|+++ +++..+...+
T Consensus 608 ~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 608 KIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 7888777767889999999999999999998776532222 335689998 5577777654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.5e-07 Score=75.19 Aligned_cols=43 Identities=14% Similarity=0.080 Sum_probs=36.7
Q ss_pred CCCCHHHHHHHHHHcCC--CCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 156 LKPSMDAMKLALHVANV--DPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~--~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
+-.|+.+++.+++.+++ ++.++++|||+.||+.|.+.+|++++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 44556889999999876 66689999999999999999999765
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.7e-07 Score=63.34 Aligned_cols=79 Identities=19% Similarity=0.285 Sum_probs=60.7
Q ss_pred CCCCChhHHHHHHhhhcCcEE---EecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCH---H
Q 025190 88 LIKPDPQLRNLLCSITQRKII---FTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM---D 161 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~i---vs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~---~ 161 (256)
.+.++|.+++++++++..|.| .|=+....+-+.|+.+++..||+-++. +|.| .
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vi---------------------ePhP~K~~ 97 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVI---------------------EPHPYKFL 97 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEe---------------------cCCChhHH
Confidence 468899999999999999984 444566777788999999999998775 4433 4
Q ss_pred HHHHHHHHc------CCCCCcEEEEcCCcccc
Q 025190 162 AMKLALHVA------NVDPRHALFLDDNIKNV 187 (256)
Q Consensus 162 ~~~~~~~~~------~~~~~~~i~vGDs~~Di 187 (256)
++.+++++. .+.|++++|++|+.--+
T Consensus 98 ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~ 129 (164)
T COG4996 98 MLSQLLREINTERNQKIKPSEIVYLDDRRIHF 129 (164)
T ss_pred HHHHHHHHHHHhhccccCcceEEEEecccccH
Confidence 455555553 46899999999987443
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.3e-06 Score=71.10 Aligned_cols=44 Identities=20% Similarity=0.148 Sum_probs=37.1
Q ss_pred CCCCHHHHHHHHHHcCCC--CCcEEEEcCCccccHHHHHcCCeEEE
Q 025190 156 LKPSMDAMKLALHVANVD--PRHALFLDDNIKNVTAGKALGLRTVL 199 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~--~~~~i~vGDs~~Di~~a~~~G~~~v~ 199 (256)
.-+|..++..+.+.++-. +-.++.+|||+||+.|.+.+-+.+|.
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 457778999999987754 44899999999999999999988775
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.7e-07 Score=86.27 Aligned_cols=111 Identities=13% Similarity=0.140 Sum_probs=82.6
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
-.++||+.+.++.|++.|+ ++|+.....++.+++++|+.++|..+ .| +-...
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~-----------------------~p--~~K~~ 703 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV-----------------------LP--DGKAE 703 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC-----------------------CH--HHHHH
Confidence 3788999999999999987 89999999999999999987544322 22 22345
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-CCCCCC--eeeCCcCchHHhHH
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-NVGEAD--YALENVNNLPQVVP 224 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-~~~~~~--~~~~~~~el~~~l~ 224 (256)
++++++..+++++||||+.||+.+++.+|+..++-+... ....+| +..+++..+..++.
T Consensus 704 ~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 704 AIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred HHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 666777778899999999999999999999776653221 223344 44567777776654
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=4.7e-07 Score=81.53 Aligned_cols=47 Identities=6% Similarity=-0.004 Sum_probs=41.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE--cCCccccHHHHHcCCeEEEEcC
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFL--DDNIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~v--GDs~~Di~~a~~~G~~~v~v~~ 202 (256)
+-.|..+++++++.++++.++++.| ||+.||+.|.+.+|.++++-+.
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 5577799999999999998999988 9999999999999998887543
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.1e-05 Score=70.40 Aligned_cols=115 Identities=23% Similarity=0.244 Sum_probs=70.7
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc-C--------cccccceeEecccCCcccccCCCC------
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL-E--------IADCFDQIICFETMNPNLSKATRP------ 149 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~-g--------l~~~f~~i~~~~~~~~~~~~~~~~------ 149 (256)
.+.+.|.+..+|+.|++.|. ++||+.-..+...++.+ | ..++||.|++...- +.-|...+.
T Consensus 181 Yi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~K-P~FF~~~~pfr~vd~ 259 (448)
T PF05761_consen 181 YIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARK-PGFFTEGRPFREVDT 259 (448)
T ss_dssp CEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--C-CHHHCT---EEEEET
T ss_pred HccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCC-CcccCCCCceEEEEC
Confidence 34567899999999999994 99999999999999875 2 44689998876532 222222110
Q ss_pred -CCCCC-------CCCC---CHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHc-CCeEEEEcCC
Q 025190 150 -DEFPV-------LLKP---SMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKAL-GLRTVLVGKT 203 (256)
Q Consensus 150 -~~~~~-------~~Kp---~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~-G~~~v~v~~~ 203 (256)
+.... ..|. ...-...+.+.+|....+|+||||+. .||...++. |+.|+.|-..
T Consensus 260 ~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 260 ETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp TTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 00001 1111 12336677777888889999999999 897777766 9999988544
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.5e-07 Score=72.42 Aligned_cols=91 Identities=12% Similarity=0.083 Sum_probs=58.1
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCC---hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
..+.||+.+|++.++++|+ ++|+.. .......|...|...+-..++-....... ... ..-|...
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~--------~~~--~~yK~~~ 183 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSK--------KSA--VEYKSER 183 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS----------------SHHH
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhcccccccccc--------ccc--cccchHH
Confidence 3889999999999999997 899874 44556678888976543344433322110 000 0113355
Q ss_pred HHHHHHH-cCCCCCcEEEEcCCccccHHHHHc
Q 025190 163 MKLALHV-ANVDPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 163 ~~~~~~~-~~~~~~~~i~vGDs~~Di~~a~~~ 193 (256)
...+.++ +.+ +++|||..+|+..++..
T Consensus 184 r~~i~~~Gy~I----i~~iGD~~~D~~~~~~~ 211 (229)
T PF03767_consen 184 RKEIEKKGYRI----IANIGDQLSDFSGAKTA 211 (229)
T ss_dssp HHHHHHTTEEE----EEEEESSGGGCHCTHHH
T ss_pred HHHHHHcCCcE----EEEeCCCHHHhhccccc
Confidence 5555555 444 88999999999995443
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.2e-07 Score=72.23 Aligned_cols=49 Identities=16% Similarity=0.154 Sum_probs=38.2
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
+.+-.|..+++++++++++++++++++|||.||+.|. ..+...|.|.+.
T Consensus 161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 161 PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence 3455677999999999999999999999999999999 666677777643
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.4e-06 Score=70.62 Aligned_cols=47 Identities=6% Similarity=-0.171 Sum_probs=38.9
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CccccHHHHHcCCeEEEEc
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDD----NIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~~~G~~~v~v~ 201 (256)
+....+-.|..+++++++. ++++++||| +.||++|.+.+|.....|.
T Consensus 181 eI~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred EeeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 3444567788999999998 589999999 8999999998887766665
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.36 E-value=4e-06 Score=74.14 Aligned_cols=100 Identities=14% Similarity=0.020 Sum_probs=58.4
Q ss_pred CChhHHHHHHhhhcCcEEEecCChHHHHHHHHh-cCcccccceeEecccC--CcccccCCCCCCCCCCCCCCHHHHHHHH
Q 025190 91 PDPQLRNLLCSITQRKIIFTNSDRNHAITCLKR-LEIADCFDQIICFETM--NPNLSKATRPDEFPVLLKPSMDAMKLAL 167 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~--~~~~~~~~~~~~~~~~~Kp~~~~~~~~~ 167 (256)
+.|.+.+.++..... ++||.+....++..++. +|++. +++.+-- ..+.|+|.-.....+.+.-| ...+.
T Consensus 111 l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VIgTeLev~~~G~~TG~i~g~~~c~Ge~K---v~rl~ 182 (497)
T PLN02177 111 VHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VLGTELEVSKSGRATGFMKKPGVLVGDHK---RDAVL 182 (497)
T ss_pred cCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EEecccEECcCCEEeeeecCCCCCccHHH---HHHHH
Confidence 667777766654332 69999999999999975 78653 3333211 01122221111001122222 33333
Q ss_pred HHcCCCCCcEEEEcCCccccHHHHHcCCeEEE
Q 025190 168 HVANVDPRHALFLDDNIKNVTAGKALGLRTVL 199 (256)
Q Consensus 168 ~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~ 199 (256)
+.++.+... +++|||.+|..+...|+-..+.
T Consensus 183 ~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V 213 (497)
T PLN02177 183 KEFGDALPD-LGLGDRETDHDFMSICKEGYMV 213 (497)
T ss_pred HHhCCCCce-EEEECCccHHHHHHhCCccEEe
Confidence 556654334 8999999999999999866543
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.8e-06 Score=58.89 Aligned_cols=81 Identities=21% Similarity=0.182 Sum_probs=51.0
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCCh---HHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~---~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.++||+.++++.|+++|. ++||++. ......|+.+|+.--.+.++++.. ..
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~-----------------------~~ 70 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGM-----------------------AA 70 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHH-----------------------HH
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHH-----------------------HH
Confidence 578999999999999875 9999853 344556788898865677887653 23
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGL 195 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~ 195 (256)
...+++. -...+++++|-. ...+.++.+|+
T Consensus 71 ~~~l~~~-~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 71 AEYLKEH-KGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp HHHHHHH-TTSSEEEEES-H-HHHHHHHHTTE
T ss_pred HHHHHhc-CCCCEEEEEcCH-HHHHHHHHcCC
Confidence 3334332 234678888865 44555555554
|
... |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-05 Score=64.89 Aligned_cols=101 Identities=9% Similarity=0.054 Sum_probs=60.1
Q ss_pred CCCCCCChhHHHHHHhhhcCcE---EEecCChH---HHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCC
Q 025190 86 YDLIKPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPS 159 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~---~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~ 159 (256)
....++.|++.+|.+.++++|+ ++|+.... .....|...|+..+ +.++....... .+.+
T Consensus 141 ~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~--------------~~~~ 205 (275)
T TIGR01680 141 KGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDN--------------SAEN 205 (275)
T ss_pred cccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCC--------------ccch
Confidence 4567899999999999999997 88998653 34556777787654 44444322111 2222
Q ss_pred HHHHHHH----HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 160 MDAMKLA----LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 160 ~~~~~~~----~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
...++.. +.+-|. .=+..|||..+|+......+.++.-.+++
T Consensus 206 av~yKs~~R~~li~eGY--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 206 AVEYKTAARAKLIQEGY--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred hHHHHHHHHHHHHHcCc--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence 2223322 112232 23679999999996554223455544433
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.6e-06 Score=68.95 Aligned_cols=70 Identities=16% Similarity=0.184 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHc-------CCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 158 PSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKAL-------GLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~-------G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
.|...++.+++++++++.++++|||+.+|+.+++.+ |..++.+..+..+..+++++++..++.++|..+.
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 346999999999999999999999999999999998 6677888766677789999999999998887654
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.6e-06 Score=79.61 Aligned_cols=133 Identities=11% Similarity=0.097 Sum_probs=88.6
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccc----cceeEecccCCccc--ccCCCCCCCCCCCCCCH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC----FDQIICFETMNPNL--SKATRPDEFPVLLKPSM 160 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~----f~~i~~~~~~~~~~--~~~~~~~~~~~~~Kp~~ 160 (256)
++.|++.+.++.|++.|+ ++|+.....+..+.+.+|+... ....+++....... ............++..|
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P 616 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP 616 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence 688999999999999997 8888888999999999998531 11223322111000 00000001122344555
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeeeCC--cCchHHhH
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYALEN--VNNLPQVV 223 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~~~--~~el~~~l 223 (256)
+--..+.+.++-..+.+.++||+.||+.+.+.++++.++- .+ ..+..+|+++.+ +..+.+.+
T Consensus 617 ~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 617 SHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred HHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHH
Confidence 6667777777766677889999999999999999977654 33 233569999987 66666654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.8e-05 Score=58.44 Aligned_cols=102 Identities=12% Similarity=0.065 Sum_probs=59.5
Q ss_pred CChhHHHHHHhhhcCcE---EEecCChHHHH---HHHHhc---CcccccceeEecccCCcccccCCCCCCCCCCCCC---
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNSDRNHAI---TCLKRL---EIADCFDQIICFETMNPNLSKATRPDEFPVLLKP--- 158 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~~~~~~~---~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp--- 158 (256)
..|++.+++++++++|+ ++|++...... ..+..+ |..-....++++......-+. ......+|
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~-----~e~i~~~~~~~ 102 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALH-----REVISKKPEVF 102 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhh-----cccccCCHHHH
Confidence 35899999999999986 88888766663 566552 211111345544432210000 01112333
Q ss_pred CHHHHHHHHHHcCCCCCcE-EEEcCCccccHHHHHcCCeE
Q 025190 159 SMDAMKLALHVANVDPRHA-LFLDDNIKNVTAGKALGLRT 197 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~-i~vGDs~~Di~~a~~~G~~~ 197 (256)
|...++.+.+.+.-..... ..+||+.+|+.+=+.+|+..
T Consensus 103 K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 103 KIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 4455666665543212233 45888899999999999973
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.4e-05 Score=62.51 Aligned_cols=95 Identities=13% Similarity=0.197 Sum_probs=65.0
Q ss_pred CCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHH----HHHHHHhcCcccccce-eEecccCCc
Q 025190 70 DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNH----AITCLKRLEIADCFDQ-IICFETMNP 141 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~----~~~~l~~~gl~~~f~~-i~~~~~~~~ 141 (256)
.++++.|...... ....+.||+.+|++...++|. .+||+..+. ...-|...|+...... ++--.+
T Consensus 106 ~f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~--- 178 (274)
T COG2503 106 GFTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKD--- 178 (274)
T ss_pred CCCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeC---
Confidence 4566666665543 566899999999999999986 899987665 4556777888765433 222211
Q ss_pred ccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHH
Q 025190 142 NLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTA 189 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~ 189 (256)
.|++...+..+.+-+ .-++.|||+..|+-.
T Consensus 179 --------------~k~Ke~R~~~v~k~~----~iVm~vGDNl~DF~d 208 (274)
T COG2503 179 --------------KKSKEVRRQAVEKDY----KIVMLVGDNLDDFGD 208 (274)
T ss_pred --------------CCcHHHHHHHHhhcc----ceeeEecCchhhhcc
Confidence 466656666665534 449999999988643
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.7e-05 Score=70.65 Aligned_cols=107 Identities=14% Similarity=0.225 Sum_probs=76.8
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCC--CHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP--SMDAM 163 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp--~~~~~ 163 (256)
-.+.|++...++.||+.|+ ++|+.....++.+.++.| ++.+++. -+| |.+.+
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~ae-------------------v~P~~K~~~I 778 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAE-------------------VLPEQKAEKI 778 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEec-------------------cCchhhHHHH
Confidence 3788999999999999998 899999999999999999 5666652 233 33455
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeee--CCcCchHHh
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYAL--ENVNNLPQV 222 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~--~~~~el~~~ 222 (256)
+.+.++- ..+.||||+.||-.+...+.++.+..... ..-..+|.+. +++.+++..
T Consensus 779 k~lq~~~----~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~a 836 (951)
T KOG0207|consen 779 KEIQKNG----GPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFA 836 (951)
T ss_pred HHHHhcC----CcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHH
Confidence 5555443 56999999999999988888776554433 2334466553 444444443
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.06 E-value=9.1e-06 Score=65.41 Aligned_cols=50 Identities=14% Similarity=-0.007 Sum_probs=44.5
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
..+.+.+|+.++++++++++++++++++|||+.||+.|++.+|...++-+
T Consensus 153 i~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~n 202 (236)
T TIGR02471 153 VLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGN 202 (236)
T ss_pred EeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcC
Confidence 34457889999999999999999999999999999999999998887654
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=8.2e-06 Score=76.11 Aligned_cols=108 Identities=19% Similarity=0.178 Sum_probs=75.8
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
-+++||+.+.++.|++.|+ ++|+.....++.+.+++|+..+++ .. +..|+..+
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~-------~~---------------p~~K~~~v-- 622 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG-------LL---------------PEDKVKAV-- 622 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC-------CC---------------HHHHHHHH--
Confidence 3889999999999999987 999999999999999999862211 11 11233433
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-CCCCCCeee--CCcCchHHhH
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-NVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-~~~~~~~~~--~~~~el~~~l 223 (256)
++++ ...+++||||+.||..+++.++++.++-+... ....+|.++ +++..|.+.+
T Consensus 623 --~~l~-~~~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 623 --TELN-QHAPLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred --HHHh-cCCCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 4444 23589999999999999999998877653221 223356554 4555555443
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00023 Score=57.70 Aligned_cols=113 Identities=20% Similarity=0.209 Sum_probs=72.6
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHH---HHhcCccccccee-Eecc-----------cCC-cccccCCCC
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITC---LKRLEIADCFDQI-ICFE-----------TMN-PNLSKATRP 149 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~---l~~~gl~~~f~~i-~~~~-----------~~~-~~~~~~~~~ 149 (256)
-..-+.+.++++.|+.+|+ .+|.......... |+.+|++ |+.. +..+ ... +-++.|
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~G--- 154 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDG--- 154 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecC---
Confidence 3556789999999999885 7787765555444 4455654 2111 0000 000 000011
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHH----HHcCCeEEEEcCCCCCC
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAG----KALGLRTVLVGKTVNVG 207 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a----~~~G~~~v~v~~~~~~~ 207 (256)
-....+-++..++..++.+.|..|+++|||+|+..++... +..|+.+.++.+...+.
T Consensus 155 -Ilft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~~~ 215 (252)
T PF11019_consen 155 -ILFTGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGAEE 215 (252)
T ss_pred -eEEeCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcchhh
Confidence 1122356778999999999999999999999999876554 44588888887665443
|
The function is not known. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00024 Score=57.52 Aligned_cols=45 Identities=9% Similarity=-0.149 Sum_probs=36.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CccccHHHHHcCCeEEEEcC
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDD----NIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~~~G~~~v~v~~ 202 (256)
+..+-.|..++++++ +++++++||| +.||++|.+.-|+.++-|..
T Consensus 184 ~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 184 FPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred eeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 334666777777777 8999999999 79999999998888876643
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00013 Score=56.66 Aligned_cols=151 Identities=16% Similarity=0.115 Sum_probs=85.3
Q ss_pred CChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcC--cEEEecCChHHHHHHHHhcCccc--------ccceeEecc---
Q 025190 71 IGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQR--KIIFTNSDRNHAITCLKRLEIAD--------CFDQIICFE--- 137 (256)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~--~~ivs~~~~~~~~~~l~~~gl~~--------~f~~i~~~~--- 137 (256)
.+.+++++.- ..+.++.||+.+.++.|+.. -+++|.+...+++....++|+.. -+|.+-.-+
T Consensus 69 Vt~~dlrr~s-----E~sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR 143 (315)
T COG4030 69 VTNRDLRRIS-----ELSAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEER 143 (315)
T ss_pred CcHHHHHHHH-----HhhcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHH
Confidence 4555555543 34578899999999999985 56999999999999999887621 112110000
Q ss_pred ------------cCCc-------ccccCCCCC--------CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHH
Q 025190 138 ------------TMNP-------NLSKATRPD--------EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAG 190 (256)
Q Consensus 138 ------------~~~~-------~~~~~~~~~--------~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a 190 (256)
..+. .+|+....+ ...+-+-.+...++..++.-+.+.+ +++||||.+|+++.
T Consensus 144 ~E~L~~~~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml 222 (315)
T COG4030 144 EELLSIIDVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFS-AVVVGDSITDVKML 222 (315)
T ss_pred HHHHHhcCccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcc-eeEecCcccchHHH
Confidence 0000 111111111 1111223345566666666666665 99999999999998
Q ss_pred HHcC----CeEEEEcCCCCCCCCCe--eeCCcCchHHhHHHHH
Q 025190 191 KALG----LRTVLVGKTVNVGEADY--ALENVNNLPQVVPEIW 227 (256)
Q Consensus 191 ~~~G----~~~v~v~~~~~~~~~~~--~~~~~~el~~~l~~~~ 227 (256)
+.+. +...+.++...-..+|. +.++...+..+|+-+.
T Consensus 223 ~~~rgrGglAvaFNGNeYal~eAdVAvisp~~~a~~pvielf~ 265 (315)
T COG4030 223 EAARGRGGLAVAFNGNEYALKEADVAVISPTAMAEAPVIELFM 265 (315)
T ss_pred HHhhccCceEEEecCCcccccccceEEeccchhhhhHHHHHHH
Confidence 8762 22233333332233444 4444445555554433
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.8e-05 Score=71.11 Aligned_cols=87 Identities=9% Similarity=0.124 Sum_probs=67.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
++.||+++.++.|++.|+ ++|+.....++.+.+.+|+++++ .. ..| +--..+
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~----a~-------------------~~P--edK~~~ 500 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFI----AE-------------------ATP--EDKIAL 500 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEE----cC-------------------CCH--HHHHHH
Confidence 788999999999999997 89999999999999999986432 21 233 223333
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
.++++-....+.|+||+.||..+.+.++++.++-+
T Consensus 501 v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~ 535 (675)
T TIGR01497 501 IRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNS 535 (675)
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCC
Confidence 33333334569999999999999999999988753
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00019 Score=55.90 Aligned_cols=101 Identities=18% Similarity=0.208 Sum_probs=80.8
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCc---ccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEI---ADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl---~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.+++++...++.-+..|+ |-|.++...++.+..+.+- ..++++.|-. ..| .|-....|
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-~iG---------------~K~e~~sy 186 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-TIG---------------LKVESQSY 186 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-ccc---------------ceehhHHH
Confidence 789999999999999886 8888888877777766542 2334433322 122 68888999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV 206 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~ 206 (256)
..|.+..+.++.++++.-|-..-..+|+.+|+.+..+.++.+.
T Consensus 187 ~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna 229 (254)
T KOG2630|consen 187 KKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGNA 229 (254)
T ss_pred HHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCCC
Confidence 9999999999999999999999999999999999888766543
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00031 Score=56.63 Aligned_cols=97 Identities=22% Similarity=0.270 Sum_probs=66.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccC-----------------CCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA-----------------TRP 149 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~-----------------~~~ 149 (256)
.+.|.+.+-|.+|++.|. +=|.|.++++...++.+++.++||.+++++......-.+ .+.
T Consensus 142 Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv 221 (297)
T PF05152_consen 142 IRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDV 221 (297)
T ss_pred cCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeC
Confidence 345677888899999984 779999999999999999999999999877544211111 001
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCc-EEEEcCCc-ccc
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRH-ALFLDDNI-KNV 187 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~-~i~vGDs~-~Di 187 (256)
+.....+| +|..+.+.+++.|++.-. +-.|+|=. ||+
T Consensus 222 ~~~~~LPK-SPrVVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 222 TNVNNLPK-SPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred CcCCCCCC-CCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 11111222 357788899999997654 44777766 443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.81 E-value=6.7e-05 Score=68.99 Aligned_cols=110 Identities=17% Similarity=0.302 Sum_probs=80.1
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
-++.|++.+.++.|++.|+ ++|+.....++.+.+++|+++++..+ +| +--..
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Ael-----------------------lP--edK~~ 590 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAEL-----------------------LP--EDKAE 590 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccC-----------------------Cc--HHHHH
Confidence 3788999999999999997 89999999999999999986655443 33 22333
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc-CCCCCCCCCeee--CCcCchHHhH
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG-KTVNVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~-~~~~~~~~~~~~--~~~~el~~~l 223 (256)
+.++++-.-..+.||||+.||-.+...+-++.++-. .......+|.++ +++..+.+.+
T Consensus 591 ~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 591 IVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred HHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 444444333679999999999999999988877665 222334566654 4466666554
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=6.3e-05 Score=68.91 Aligned_cols=86 Identities=12% Similarity=0.082 Sum_probs=69.6
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
++.|++++.+++|++.|+ ++|+.+...+..+.+.+|++++|.. .+| +--..+
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~-----------------------~~P--edK~~i 495 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAE-----------------------CKP--EDKINV 495 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcC-----------------------CCH--HHHHHH
Confidence 788999999999999997 8999999999999999999753221 233 445555
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
.+.++-.-+.+.|+||+.||..+.+++.++.++-
T Consensus 496 V~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 496 IREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred HHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 5665555567899999999999999999888776
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00012 Score=63.03 Aligned_cols=94 Identities=14% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....+|....+++..|+++|+ ++|-+....++.+.+++. +.++.-++.. .+.....||.+.+
T Consensus 252 ~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa----------~~~iNW~~K~eNi 316 (574)
T COG3882 252 AEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFA----------VFQINWDPKAENI 316 (574)
T ss_pred CCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhh----------hheecCCcchhhH
Confidence 344666778899999999998 677777777887777765 3334333332 2344589999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGL 195 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~ 195 (256)
+.+++++++..+..+|++|++..-+.-+.-+-
T Consensus 317 rkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 317 RKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred HHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 99999999999999999999988888888775
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=9.1e-05 Score=67.98 Aligned_cols=107 Identities=11% Similarity=0.128 Sum_probs=77.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
++.||+++.++.|++.|+ ++|+.....++.+.+.+|++++ +.. .+| +--..+
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v----~A~-------------------~~P--edK~~i 499 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDF----LAE-------------------ATP--EDKLAL 499 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEE----Ecc-------------------CCH--HHHHHH
Confidence 678999999999999997 8999999999999999998643 221 233 444455
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeC--CcCchHHh
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALE--NVNNLPQV 222 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~--~~~el~~~ 222 (256)
.++++-..+-+.|+||+.||..+.+++.++.++- .+. .+..+|.+.- ++..+.+.
T Consensus 500 V~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~a 558 (679)
T PRK01122 500 IRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEV 558 (679)
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHH
Confidence 5555544556999999999999999999888876 332 2344555543 34444443
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.69 E-value=3e-05 Score=60.86 Aligned_cols=48 Identities=17% Similarity=0.031 Sum_probs=43.1
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
+..+.+.+|+.++++++++++++++++++|||+.||+.+++.+|+..+
T Consensus 156 ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 156 EVLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred EEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 334457889999999999999999999999999999999999998875
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.68 E-value=9e-05 Score=55.56 Aligned_cols=80 Identities=23% Similarity=0.269 Sum_probs=61.1
Q ss_pred CCCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCcc-ccc-ceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIA-DCF-DQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~-~~f-~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
....++||+.++|++|++.. + |+|++....+..+++.++.. .+| +.+++.+++... ..|
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~------------~~K----- 117 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGSP------------HTK----- 117 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCCC------------ccc-----
Confidence 45678999999999999762 2 99999999999999999988 488 677777664310 112
Q ss_pred HHHHHHHcCCCCCcEEEEcCCcc
Q 025190 163 MKLALHVANVDPRHALFLDDNIK 185 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~ 185 (256)
.+-..++.+.+.++.|+|++.
T Consensus 118 --dL~~i~~~d~~~vvivDd~~~ 138 (156)
T TIGR02250 118 --SLLRLFPADESMVVIIDDRED 138 (156)
T ss_pred --cHHHHcCCCcccEEEEeCCHH
Confidence 222446778899999999984
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00034 Score=52.30 Aligned_cols=91 Identities=20% Similarity=0.194 Sum_probs=60.4
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHH----HHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAIT----CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~----~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
.|-.-+++++...+++|- .+|+...-.+.. +.+.+.+.+....+|.++. .||..-.
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk-----------------~k~~qy~ 176 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDK-----------------PKPGQYT 176 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCC-----------------CCccccc
Confidence 455567789988888873 888876554433 3344556555555666542 2332222
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
-.+.+...++ -|+.|||-+||.+|+.+|.+.+-+-
T Consensus 177 Kt~~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 177 KTQWIQDKNI----RIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred ccHHHHhcCc----eEEecCCchhhhHHHhcCccceeEE
Confidence 3345555665 5899999999999999999988664
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00012 Score=70.32 Aligned_cols=134 Identities=13% Similarity=0.044 Sum_probs=87.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCccccc--CCCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK--ATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~--~~~~~~~~~~~Kp~~~~~~ 164 (256)
++.|++++.++.|++.|+ ++|+.....+..+.+.+|+.+--..++++.+....... .........+++-.|+--.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~ 658 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQ 658 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHH
Confidence 778999999999999997 89999999999999999986432334444332210000 0000000112333445555
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeeeC--CcCchHHhH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYALE--NVNNLPQVV 223 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~~--~~~el~~~l 223 (256)
.+.+.++-.-+.+.|+||+.||..+.+++.++.++-..+ ..+..+|+++. ++..+...+
T Consensus 659 ~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 659 LLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred HHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 555555544557999999999999999999888764233 23456888876 565555544
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00017 Score=68.58 Aligned_cols=130 Identities=9% Similarity=0.130 Sum_probs=83.4
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccC--CCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA--TRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~--~~~~~~~~~~Kp~~~~~~ 164 (256)
+|.|++++.++.|++.|+ ++|+.....+..+.+.+|+.. +.++++.+....-... ........+.+-.|+--.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~ 592 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKS 592 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence 778999999999999997 899999999999999999962 2333333221100000 000000112333445555
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC-CCCCCCCCeeeC--CcCchHH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK-TVNVGEADYALE--NVNNLPQ 221 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~-~~~~~~~~~~~~--~~~el~~ 221 (256)
++.+.++-.-+.+.|+||+.||..+.+.+.++.++-+. ...+..+|.++- ++..+..
T Consensus 593 ~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ 652 (867)
T TIGR01524 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEE 652 (867)
T ss_pred HHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHH
Confidence 55555555556799999999999999999999876531 223456787763 3444443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00021 Score=58.61 Aligned_cols=75 Identities=19% Similarity=0.196 Sum_probs=60.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHc---CCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHHhcCC
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKAL---GLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQS 231 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~---G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~ 231 (256)
.+-.|..+++++++.++++.++++++||+.||+.|.+.+ +-.+|.++.. ...|.+.+++..++..+|..+.....
T Consensus 171 ~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a--~~~A~~~l~~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG--ATQASWRLAGVPDVWSWLEMITTAQQ 248 (266)
T ss_pred CCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC--CCcCeEeCCCHHHHHHHHHHHHHhhh
Confidence 355788999999999999999999999999999999988 2344555433 45589999999999999988774444
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0001 Score=55.43 Aligned_cols=90 Identities=17% Similarity=0.225 Sum_probs=59.9
Q ss_pred CCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCc-ccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEI-ADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl-~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
.+.+.||+.+||+.|.+.. + +.|.+....++.+++.+.- ..+|+.++..+.+... .+. +.
T Consensus 34 ~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~-------------~~~----~~ 96 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFD-------------KGS----YI 96 (159)
T ss_dssp EEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEE-------------TTE----EE
T ss_pred eEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccc-------------ccc----cc
Confidence 3467899999999997653 3 9999999999999999987 5678988887765421 111 01
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcC
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALG 194 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G 194 (256)
+-++..+-+.+++|+|+|++.-...-...+
T Consensus 97 KdL~~l~~~~~~vvivDD~~~~~~~~~~N~ 126 (159)
T PF03031_consen 97 KDLSKLGRDLDNVVIVDDSPRKWALQPDNG 126 (159)
T ss_dssp --GGGSSS-GGGEEEEES-GGGGTTSGGGE
T ss_pred cchHHHhhccccEEEEeCCHHHeeccCCce
Confidence 345555667899999999997543334443
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00018 Score=69.67 Aligned_cols=133 Identities=9% Similarity=0.038 Sum_probs=87.7
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccc----------cceeEecccCCccccc--CCCCCCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC----------FDQIICFETMNPNLSK--ATRPDEFPV 154 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~----------f~~i~~~~~~~~~~~~--~~~~~~~~~ 154 (256)
++.|++.+.++.|++.|+ ++|+.....+..+.+.+|+.+- -..++++.......-. .........
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V 725 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV 725 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence 778999999999999997 8999999999999999999532 1234444433210000 000001112
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeeeCC--cCchHHh
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYALEN--VNNLPQV 222 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~~~--~~el~~~ 222 (256)
+++-.|+--..+.+.++-..+.+.++||+.||..+.+.+.++.++-..+ ..+..+|+++.+ +..+...
T Consensus 726 ~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~ 797 (1053)
T TIGR01523 726 IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNA 797 (1053)
T ss_pred EEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHH
Confidence 3444555556666666555567899999999999999999988864233 234568888855 5555443
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00035 Score=58.66 Aligned_cols=87 Identities=13% Similarity=0.027 Sum_probs=66.1
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCC---hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.++||+.++|++|+++|+ ++||+. .......++.+|+...++.|+++. ...
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~-----------------------~~~ 100 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS-----------------------FAA 100 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH-----------------------HHH
Confidence 578999999999999886 899987 444445567889877777887753 245
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEE
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVL 199 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~ 199 (256)
...+++.+....+.++++++..+.+.++.+|+.++.
T Consensus 101 ~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 101 AAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred HHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 566666666444568888888899999999998765
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00042 Score=49.76 Aligned_cols=46 Identities=15% Similarity=0.147 Sum_probs=29.9
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChH---------------HHHHHHHhcCcccccceeEecc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRN---------------HAITCLKRLEIADCFDQIICFE 137 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~---------------~~~~~l~~~gl~~~f~~i~~~~ 137 (256)
.+.+++.+.+++|+++|+ ++|+.... .+...|.+.++. +|.++.+.
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~~k 87 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYVGK 87 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEeCC
Confidence 455667777777776664 66766443 445677777775 67777644
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00021 Score=68.18 Aligned_cols=131 Identities=13% Similarity=0.122 Sum_probs=86.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccc--cCCCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS--KATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~--~~~~~~~~~~~~Kp~~~~~~ 164 (256)
++.|++++.++.|++.|+ ++|+.....+..+.+.+|+.. +.++++.+.....- ..........+.+-.|+--.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~ 627 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS 627 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH
Confidence 778999999999999997 899999999999999999952 23333332211000 00000000122344556666
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeee--CCcCchHHhH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~--~~~~el~~~l 223 (256)
.+.+.++-.-+.+.|+||+.||..+.+.+.++.++- .+. .+..+|.++ +++..+...+
T Consensus 628 ~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 628 RVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred HHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHH
Confidence 666666655567999999999999999999887765 332 345688876 4455554443
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00035 Score=66.64 Aligned_cols=130 Identities=12% Similarity=0.108 Sum_probs=86.4
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccc--cCCCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS--KATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~--~~~~~~~~~~~~Kp~~~~~~ 164 (256)
+|.|++.+.++.|++.|+ ++|+.....+..+.+.+|+.. +.++++.+.....- ..........+.+-.|+--.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~ 627 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKE 627 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHH
Confidence 678999999999999997 899999999999999999952 33444443221000 00000000122344556666
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeC--CcCchHHh
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALE--NVNNLPQV 222 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~--~~~el~~~ 222 (256)
.+.+.++-..+.+.|+||+.||..+.+.+.++.++- .+. .+..+|.++- ++..+.+.
T Consensus 628 ~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~a 688 (902)
T PRK10517 628 RIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEG 688 (902)
T ss_pred HHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHH
Confidence 666666655567899999999999999999988765 332 3456787774 34444443
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00076 Score=65.25 Aligned_cols=133 Identities=11% Similarity=0.023 Sum_probs=85.9
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc------------------------ceeEecccCCcc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF------------------------DQIICFETMNPN 142 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f------------------------~~i~~~~~~~~~ 142 (256)
+|.|++++.++.|++.|+ ++|+.....+..+.+.+|+.+-- ..++++......
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 678999999999999997 89999999999999999984210 023333322110
Q ss_pred cccCCC--C--CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeCC-
Q 025190 143 LSKATR--P--DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALEN- 215 (256)
Q Consensus 143 ~~~~~~--~--~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~~- 215 (256)
.-.... . .....+++-.|+--..+.+.++-....+.++||+.||+.+.+.+.++.++-..+. .+..+|+++.+
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd 727 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDD 727 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecC
Confidence 000000 0 0001334445555555666555444578999999999999999999887653332 34567888766
Q ss_pred -cCchHHh
Q 025190 216 -VNNLPQV 222 (256)
Q Consensus 216 -~~el~~~ 222 (256)
+..+.+.
T Consensus 728 ~f~~Iv~a 735 (997)
T TIGR01106 728 NFASIVTG 735 (997)
T ss_pred CHHHHHHH
Confidence 5555443
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00044 Score=64.92 Aligned_cols=120 Identities=10% Similarity=0.066 Sum_probs=79.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCccccc-CC-------CCCCCCCCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK-AT-------RPDEFPVLLKP 158 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~-~~-------~~~~~~~~~Kp 158 (256)
+|.|++++.++.|++.|+ ++|+.....++.+.+++|+.+. ++++++....... .. .......+.+-
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 788999999999999997 8999999999999999999641 2222211100000 00 00000122344
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeee
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYAL 213 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~ 213 (256)
.|+--..+.+.++-.-+.+.|+||+.||..+.+.+.++.++- .+. .+..+|.++
T Consensus 519 ~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivL 574 (755)
T TIGR01647 519 FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVL 574 (755)
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEE
Confidence 455566666666655677999999999999999999887764 332 234566665
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00025 Score=52.42 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=68.3
Q ss_pred CCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCccc-ccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
+......++...|..+++..- .+|.......+..-..+...+ .+|.+...+. +.|
T Consensus 69 ke~l~~q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g~----------------h~K------ 126 (194)
T COG5663 69 KEALLAQLVKQVLPSLKEEHRLIYITARKADLTRITYAWLFIQNIHYDHLEIVGL----------------HHK------ 126 (194)
T ss_pred HHHHHHHHHHHHhHHHHhhceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhcc----------------ccc------
Confidence 334556678888888887653 566665554444333332222 2444332111 123
Q ss_pred HHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCCCCCC---eeeCCcCchHHhHHHHH
Q 025190 164 KLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNVGEAD---YALENVNNLPQVVPEIW 227 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~~~~~---~~~~~~~el~~~l~~~~ 227 (256)
..+.+.++++ +++.|+. |-.+.|+.+|++.+.++.+.....++ ..+..+.+..+++...+
T Consensus 127 V~~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~~ 190 (194)
T COG5663 127 VEAVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSRL 190 (194)
T ss_pred chhhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHHh
Confidence 2567778885 6999999 56888888999999999877554332 22344444445554433
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0014 Score=56.12 Aligned_cols=114 Identities=17% Similarity=0.141 Sum_probs=85.5
Q ss_pred hhhHhhhhhcCCCCCCCCCChhH--HHHHHhhhcCcE---EEecC--ChHHHHHHHHhcCcccccceeEecccCCccccc
Q 025190 73 ADDYHGFVHGRLPYDLIKPDPQL--RNLLCSITQRKI---IFTNS--DRNHAITCLKRLEIADCFDQIICFETMNPNLSK 145 (256)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~pg~--~~~l~~l~~~~~---ivs~~--~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 145 (256)
+..+.+...-.+..+...++|.. .++.+++.+.+. ++|+- +.+..+..|...|.+-.--.++.+.....
T Consensus 80 p~~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl---- 155 (635)
T COG5610 80 PLSFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRL---- 155 (635)
T ss_pred cHHHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeeh----
Confidence 33444444333334555566655 478899988774 78876 66777889999887644344666655554
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEE
Q 025190 146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLV 200 (256)
Q Consensus 146 ~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v 200 (256)
.|.....|+.+++..++++...+++||+. .|..+++++|+.+...
T Consensus 156 ----------~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 156 ----------KKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred ----------hcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 58888999999999999999999999999 7999999999988654
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0013 Score=63.09 Aligned_cols=116 Identities=15% Similarity=0.145 Sum_probs=84.1
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc--ceeEecccCCccccc--CCCCCCCCCCCCCCHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSK--ATRPDEFPVLLKPSMD 161 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~--~~~~~~~~~~~Kp~~~ 161 (256)
-+|.|++++.++.|++.|+ .+|+....-+..+.+..|+..-- +.++++.......-. -........+++-.|+
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 3789999999999999997 89999999999999999976544 336666554321000 0011122345566666
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 162 AMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
--.++.+.++=.-.-+.|+||+.||..+.+.|.++..+...+.
T Consensus 626 qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gt 668 (917)
T COG0474 626 QKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGT 668 (917)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHH
Confidence 6666766666656678999999999999999999988776543
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.00091 Score=58.29 Aligned_cols=49 Identities=10% Similarity=-0.020 Sum_probs=41.8
Q ss_pred CCCCCCCHHHHHHHHHHc---CCCCCcEEEEcCCccccHHHHHcC-CeEEEEc
Q 025190 153 PVLLKPSMDAMKLALHVA---NVDPRHALFLDDNIKNVTAGKALG-LRTVLVG 201 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~---~~~~~~~i~vGDs~~Di~~a~~~G-~~~v~v~ 201 (256)
+..+-.|..+++++++++ |+++++++++||+.||++|.+.+| .+.++-+
T Consensus 170 ~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 170 LPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSN 222 (413)
T ss_pred EeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcC
Confidence 334566789999999999 999999999999999999999999 5666544
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.006 Score=54.72 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=72.8
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
-++.|++.+.++.|++.|+ ++|+.....+..+.+.+|+ ++ .-.|+--..
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~~---------------------~~~p~~K~~ 397 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------FA---------------------RVTPEEKAA 397 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------ee---------------------ccCHHHHHH
Confidence 3788999999999999886 8999999999999999986 11 112233334
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHH
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQ 221 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~ 221 (256)
+.++++-....+.++||+.||..+.+.++.+.++. ....+|.++.+ .++..
T Consensus 398 ~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~----a~~~adivl~~-~~l~~ 448 (499)
T TIGR01494 398 LVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG----AKAAADIVLLD-DNLST 448 (499)
T ss_pred HHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc----hHHhCCeEEec-CCHHH
Confidence 44444333467999999999999999998775543 34457888775 44443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0092 Score=50.06 Aligned_cols=76 Identities=13% Similarity=0.150 Sum_probs=56.1
Q ss_pred EEecCChHHHHHHHHhcCccccc--ceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc
Q 025190 108 IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIK 185 (256)
Q Consensus 108 ivs~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~ 185 (256)
+||+....-.-..+=..||...| +.|+++...| |. ..|++|.+++|- ...-++|||+..
T Consensus 375 lvTttqLipalaKvLL~gLg~~fpiENIYSa~kiG----------------Ke--scFerI~~RFg~-K~~yvvIgdG~e 435 (468)
T KOG3107|consen 375 LVTTTQLIPALAKVLLYGLGSSFPIENIYSATKIG----------------KE--SCFERIQSRFGR-KVVYVVIGDGVE 435 (468)
T ss_pred EEeccchhHHHHHHHHHhcCCcccchhhhhhhhcc----------------HH--HHHHHHHHHhCC-ceEEEEecCcHH
Confidence 67776444444444445666655 5688776654 44 889999999997 456789999999
Q ss_pred ccHHHHHcCCeEEEEcC
Q 025190 186 NVTAGKALGLRTVLVGK 202 (256)
Q Consensus 186 Di~~a~~~G~~~v~v~~ 202 (256)
.-.+|++..|++.-+..
T Consensus 436 ee~aAK~ln~PfwrI~~ 452 (468)
T KOG3107|consen 436 EEQAAKALNMPFWRISS 452 (468)
T ss_pred HHHHHHhhCCceEeecc
Confidence 99999999999887753
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.012 Score=43.80 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=52.7
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHH---HHHHHhc-----CcccccceeEecccCCcccccCCCCCCCCCCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHA---ITCLKRL-----EIADCFDQIICFETMNPNLSKATRPDEFPVLLKP 158 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~---~~~l~~~-----gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp 158 (256)
...||+.++++.++++|+ .+|....-.. +..|..+ ++.+ -.++.+-+.....+.+ + ...+
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~--Gpv~~sP~~l~~al~r----E---vi~~ 97 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD--GPVLLSPDSLFSALHR----E---VISK 97 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC--CCEEECCcchhhhhhc----c---cccc
Confidence 456789999999999987 6777754443 4445544 2221 1122221110000000 0 0123
Q ss_pred CHHHHHHH-----HHHcCCCC-CcEEEEcCCccccHHHHHcCCe
Q 025190 159 SMDAMKLA-----LHVANVDP-RHALFLDDNIKNVTAGKALGLR 196 (256)
Q Consensus 159 ~~~~~~~~-----~~~~~~~~-~~~i~vGDs~~Di~~a~~~G~~ 196 (256)
+|+.|+.. .+.+.-.. .=...+|++.+|+.+=+++|+.
T Consensus 98 ~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 98 DPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 44555543 22222111 1245799999999999999997
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0074 Score=47.79 Aligned_cols=77 Identities=12% Similarity=0.086 Sum_probs=62.1
Q ss_pred EEecCChHHHHHHHHhcCccccc--ceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc
Q 025190 108 IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIK 185 (256)
Q Consensus 108 ivs~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~ 185 (256)
+||++.-...-...=.++++.+| +.|+++-.++ |. ..|++|.+++|-+...-++|||+..
T Consensus 180 LVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kvG----------------K~--~cFe~I~~Rfg~p~~~f~~IGDG~e 241 (274)
T TIGR01658 180 LVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKVG----------------KL--QCFKWIKERFGHPKVRFCAIGDGWE 241 (274)
T ss_pred EEEcCccHHHHHHHHHhccCCccccccccchhhcc----------------hH--HHHHHHHHHhCCCCceEEEeCCChh
Confidence 88888655554455556787877 5688876653 54 8899999999998889999999999
Q ss_pred ccHHHHHcCCeEEEEcC
Q 025190 186 NVTAGKALGLRTVLVGK 202 (256)
Q Consensus 186 Di~~a~~~G~~~v~v~~ 202 (256)
.-.+|+..+++++-++.
T Consensus 242 Ee~aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 242 ECTAAQAMNWPFVKIDL 258 (274)
T ss_pred HHHHHHhcCCCeEEeec
Confidence 99999999999998864
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0032 Score=59.11 Aligned_cols=68 Identities=19% Similarity=0.147 Sum_probs=54.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCC--eEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGL--RTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~--~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+-.|..+++.+++ +++++.++++||+.||+.|.+.++. .++.++ .....+++++.+..++..+|+.+.
T Consensus 655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG--~~~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVG--PGESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEEC--CCCCcceEeCCCHHHHHHHHHHHh
Confidence 4567789999998 7788999999999999999999743 334443 356779999999999888887654
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.014 Score=57.06 Aligned_cols=133 Identities=12% Similarity=0.135 Sum_probs=82.6
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccC---------------Cc----------
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETM---------------NP---------- 141 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~---------------~~---------- 141 (256)
++.|++.+.++.|++.|+ ++|+....-+..+.+..|+.+--+.++..+.. ..
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEI 735 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccc
Confidence 688999999999999997 89999999999999999985322222211100 00
Q ss_pred c------------------cccC---------------CCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccH
Q 025190 142 N------------------LSKA---------------TRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVT 188 (256)
Q Consensus 142 ~------------------~~~~---------------~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~ 188 (256)
. ...| ........+++-.|+--..+.+.++-.-..+.|+||+.||..
T Consensus 736 ~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ 815 (1054)
T TIGR01657 736 PYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCG 815 (1054)
T ss_pred cCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHH
Confidence 0 0000 000011233344555555666665554567999999999999
Q ss_pred HHHHcCCeEEEEcCCCCCCCCCeee--CCcCchHHhH
Q 025190 189 AGKALGLRTVLVGKTVNVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 189 ~a~~~G~~~v~v~~~~~~~~~~~~~--~~~~el~~~l 223 (256)
+.++|.++.++.... ....++++. +++..+...+
T Consensus 816 ALK~AdVGIam~~~d-as~AA~f~l~~~~~~~I~~~I 851 (1054)
T TIGR01657 816 ALKQADVGISLSEAE-ASVAAPFTSKLASISCVPNVI 851 (1054)
T ss_pred HHHhcCcceeecccc-ceeecccccCCCcHHHHHHHH
Confidence 999998888776432 223456663 3444444444
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0068 Score=55.95 Aligned_cols=124 Identities=10% Similarity=0.075 Sum_probs=85.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccc----eeEecccCCcc--cccCCCCCCCCCCCCCCH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFD----QIICFETMNPN--LSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~~~--~~~~~~~~~~~~~~Kp~~ 160 (256)
+|.|++++.++.|++.|+ .+|+...+-++.+.+.+|+...-+ ..+++...... ..-.-.+....++.+-.|
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P 663 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEP 663 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCc
Confidence 899999999999999998 899999999999999999765444 34444332210 000001112233344455
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeee
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYAL 213 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~ 213 (256)
.--.++.+.++-.-+=+.|-||+.||-.+.+.+.++.++--.+. .+..+|.+.
T Consensus 664 ~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL 718 (972)
T KOG0202|consen 664 QHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVL 718 (972)
T ss_pred hhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEE
Confidence 66667777776666678899999999999999999988774443 334455554
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0034 Score=61.30 Aligned_cols=134 Identities=13% Similarity=0.100 Sum_probs=81.0
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce----------------------------------
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ---------------------------------- 132 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~---------------------------------- 132 (256)
++.||+.+.++.|++.|+ ++|+...+-+..+....|+-+--..
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 710 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLG 710 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhc
Confidence 788999999999999997 8999888888888877776432111
Q ss_pred -------eEecccCCccc-------ccC-CCCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccccHHHHHcCCe
Q 025190 133 -------IICFETMNPNL-------SKA-TRPDEFPVLLKPSMDAMKLALHVANVD-PRHALFLDDNIKNVTAGKALGLR 196 (256)
Q Consensus 133 -------i~~~~~~~~~~-------~~~-~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~G~~ 196 (256)
+++++....-+ |.. .........++-.|.--..+.+.++-. ...+.++||+.||+.|.+.|.++
T Consensus 711 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVG 790 (1057)
T TIGR01652 711 DSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVG 790 (1057)
T ss_pred cCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCee
Confidence 22222111000 000 000000123333334333444443332 45799999999999999999877
Q ss_pred EEEEcCCC--CCCCCCeeeCCcCchHHhH
Q 025190 197 TVLVGKTV--NVGEADYALENVNNLPQVV 223 (256)
Q Consensus 197 ~v~v~~~~--~~~~~~~~~~~~~el~~~l 223 (256)
....+... ....+|+++.++..|..+|
T Consensus 791 Igi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 791 VGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred eEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 73333221 2356999998877766654
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0089 Score=51.24 Aligned_cols=71 Identities=17% Similarity=0.230 Sum_probs=56.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCc---EEEEcCCccccHHHHHc-----CCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 156 LKPSMDAMKLALHVANVDPRH---ALFLDDNIKNVTAGKAL-----GLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~---~i~vGDs~~Di~~a~~~-----G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+-.|..+++++++.++++..+ .++|||..+|..+.+.+ |+. |.+..+.....|.|.+.+..++.++|..+.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~ 377 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVSSVPKESNAFYSLRDPSEVMEFLKSLV 377 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEecCCCCccceEEcCCHHHHHHHHHHHH
Confidence 346779999999999987653 38999999999999963 544 445544456678999999999999998764
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.15 Score=40.02 Aligned_cols=38 Identities=13% Similarity=0.078 Sum_probs=28.2
Q ss_pred HHHHHHHHHcCC-CCCc-EEEEcCCccccHHHHHcCCeEE
Q 025190 161 DAMKLALHVANV-DPRH-ALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 161 ~~~~~~~~~~~~-~~~~-~i~vGDs~~Di~~a~~~G~~~v 198 (256)
.+.+.+++.+.. ...+ ++.+||++||+.+....-..++
T Consensus 194 ~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~Afi 233 (274)
T COG3769 194 QAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAFI 233 (274)
T ss_pred HHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhhee
Confidence 667888887643 3344 8999999999999887655444
|
|
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.032 Score=40.27 Aligned_cols=165 Identities=10% Similarity=0.070 Sum_probs=90.4
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhcC
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGR 83 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (256)
+.|.+..|+|-||.|..+.|-..+. .....+++.... .|+...... ...-..+.....+-
T Consensus 2 ~kk~iaIDmD~vLadll~ewv~~~N------~y~D~~lk~~di----------~gwdik~yv----~~~~g~i~~il~ep 61 (180)
T COG4502 2 NKKTIAIDMDTVLADLLREWVKRYN------IYKDKLLKMSDI----------KGWDIKNYV----KPECGKIYDILKEP 61 (180)
T ss_pred CCceEEeeHHHHHHHHHHHHHHHhh------hccccCcChHhh----------cccchhhcc----CccCCeeeeeccCc
Confidence 4588999999999887665544443 223333332111 111111000 00000122222221
Q ss_pred CCCCCCCCChhHHHHHHhhhcCc-E-EEecC--ChHH----HHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 84 LPYDLIKPDPQLRNLLCSITQRK-I-IFTNS--DRNH----AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 84 ~~~~~~~~~pg~~~~l~~l~~~~-~-ivs~~--~~~~----~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
-.+..+.+.|++.+.+++|.+.. + |||.. .... .+.+.+.+.+-++-..++|+.-.-.
T Consensus 62 ~fFRnL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgnKniv-------------- 127 (180)
T COG4502 62 HFFRNLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGNKNIV-------------- 127 (180)
T ss_pred chhhhcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecCCCeE--------------
Confidence 12567789999999999999874 4 77765 3333 3455666677677777888542211
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVV 223 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l 223 (256)
.--++|+|++..++..+. ++..+=.....+..--..+.++.|+.+.+
T Consensus 128 -------------------kaDilIDDnp~nLE~F~G--~kIlFdA~HN~nenRF~Rv~~W~e~eq~l 174 (180)
T COG4502 128 -------------------KADILIDDNPLNLENFKG--NKILFDAHHNKNENRFVRVRDWYEAEQAL 174 (180)
T ss_pred -------------------EeeEEecCCchhhhhccC--ceEEEecccccCccceeeeccHHHHHHHH
Confidence 124789999999887764 34333222222333445567777766443
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.037 Score=45.70 Aligned_cols=85 Identities=15% Similarity=0.130 Sum_probs=57.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCCh---HHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~---~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.++||+.++|+.|+++|+ ++||+.. ......++.+|+....+.++++. ...
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~-----------------------~~~ 74 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSA-----------------------LCA 74 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHH-----------------------HHH
Confidence 478899999999999885 8998653 33345678889875556676643 234
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
...+++......+++++|+.. -...++..|+..+
T Consensus 75 ~~~l~~~~~~~~~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 75 ARLLRQPPDAPKAVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred HHHHHhhCcCCCEEEEEcCHH-HHHHHHHCCCEEe
Confidence 445555444456799999852 2445566787754
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.034 Score=43.18 Aligned_cols=101 Identities=15% Similarity=0.202 Sum_probs=57.3
Q ss_pred CCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCccc--ccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIAD--CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
...|++.+||+.+.+.. + |-|.+....+..++..+++.. .+...+.-+.....-+...+ ......|+ +..
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~--~g~~~vKd----L~~ 118 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPR--RGKFDVKP----LGV 118 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeec--cCcEEEee----cHH
Confidence 56799999999999864 3 889999999999999987642 12222221211100000000 00011344 333
Q ss_pred HHHHcC--CCCCcEEEEcCCccccHHHHHcCCe
Q 025190 166 ALHVAN--VDPRHALFLDDNIKNVTAGKALGLR 196 (256)
Q Consensus 166 ~~~~~~--~~~~~~i~vGDs~~Di~~a~~~G~~ 196 (256)
+-+.++ .+.+++|+|+|++....+==..|+.
T Consensus 119 lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~ 151 (195)
T TIGR02245 119 IWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLK 151 (195)
T ss_pred hhhhcccCCCcccEEEEeCCHHHHhcCCCCccc
Confidence 333454 3778999999999654433233443
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.064 Score=39.35 Aligned_cols=35 Identities=11% Similarity=0.244 Sum_probs=31.6
Q ss_pred CCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC
Q 025190 172 VDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV 206 (256)
Q Consensus 172 ~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~ 206 (256)
+.++++++|||++ .||.+|...|--.||..++...
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~ 172 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRA 172 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEecccccc
Confidence 5889999999999 8999999999999999877544
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.021 Score=50.14 Aligned_cols=86 Identities=10% Similarity=0.164 Sum_probs=65.8
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
.+-||++|-+.+||+-|+ .+|+...--+..+.+..|+++|... ++| +--...
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe-----------------------atP--EdK~~~ 501 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE-----------------------ATP--EDKLAL 501 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc-----------------------CCh--HHHHHH
Confidence 556999999999999998 5666666666778888998765433 466 444556
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEE
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v 200 (256)
.++.+-.-.=+.|.||+.||..+..++..+.++.
T Consensus 502 I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN 535 (681)
T COG2216 502 IRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 535 (681)
T ss_pred HHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc
Confidence 6666666666889999999999999998776655
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.019 Score=54.58 Aligned_cols=72 Identities=14% Similarity=0.134 Sum_probs=57.0
Q ss_pred CCCCCHHHHHHHHHH---cCCCCCcEEEEcCCccccHHHHHcCC-------------eEEEEcCCCCCCCCCeeeCCcCc
Q 025190 155 LLKPSMDAMKLALHV---ANVDPRHALFLDDNIKNVTAGKALGL-------------RTVLVGKTVNVGEADYALENVNN 218 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~---~~~~~~~~i~vGDs~~Di~~a~~~G~-------------~~v~v~~~~~~~~~~~~~~~~~e 218 (256)
.+-.|..+++.+++. +|++++.+++|||..||..|.+.++- -+|.|+ .....|.+.+++..+
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG--~~~S~A~y~L~d~~e 836 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG--QKPSKAKYYLDDTAE 836 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC--CCCccCeEecCCHHH
Confidence 355677889888754 68899999999999999999998862 334454 446778999999999
Q ss_pred hHHhHHHHHh
Q 025190 219 LPQVVPEIWV 228 (256)
Q Consensus 219 l~~~l~~~~~ 228 (256)
+.++|..+..
T Consensus 837 V~~lL~~L~~ 846 (854)
T PLN02205 837 IVRLMQGLAS 846 (854)
T ss_pred HHHHHHHHHh
Confidence 9999987663
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.028 Score=46.86 Aligned_cols=112 Identities=21% Similarity=0.240 Sum_probs=72.5
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc---CcccccceeEecccCCcccccCCC----------CCCC
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATR----------PDEF 152 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~----------~~~~ 152 (256)
+.-.|...+++++|+.+|. ++||++..++..-++.+ ...++||.|+.-.+ .++.|...+ ++..
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~-KP~Fftde~rPfR~~dek~~sl~ 317 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQAN-KPEFFTDERRPFRKYDEKRGSLL 317 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecC-CCcccccccCcchhhcccccchh
Confidence 3455788899999999885 99999999888766654 23367887665433 222333211 1000
Q ss_pred ------CCCCCC-CHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHH-HcCCeEEEEc
Q 025190 153 ------PVLLKP-SMDAMKLALHVANVDPRHALFLDDNI-KNVTAGK-ALGLRTVLVG 201 (256)
Q Consensus 153 ------~~~~Kp-~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~-~~G~~~v~v~ 201 (256)
...+|- ....+...++.-+....+++|+||.+ +|+.... +.|+++..+-
T Consensus 318 wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 318 WDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 000110 11225566666778888999999999 8987776 8999987664
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.39 Score=38.59 Aligned_cols=116 Identities=10% Similarity=0.135 Sum_probs=61.6
Q ss_pred CCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce-eEecccCCc---c
Q 025190 70 DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ-IICFETMNP---N 142 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~-i~~~~~~~~---~ 142 (256)
.++.+.+.....+ ..+.+.+|+.++++.|.++++ |.|.|-...++.++++.+.. ++. -+.++-+.. +
T Consensus 74 ~l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~--~~Nv~VvSN~M~Fd~~g 147 (246)
T PF05822_consen 74 GLTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVF--HPNVKVVSNFMDFDEDG 147 (246)
T ss_dssp T-BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT----BTTEEEEEE-EEE-TTS
T ss_pred CcCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCC--CCCeEEEeeeEEECCcc
Confidence 4566667666654 568899999999999999998 99999999999999998643 221 111111100 0
Q ss_pred cccCCCCCCCCCCCCCCHHHHHHHHHHc-CC-CCCcEEEEcCCccccHHHHHc
Q 025190 143 LSKATRPDEFPVLLKPSMDAMKLALHVA-NV-DPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 143 ~~~~~~~~~~~~~~Kp~~~~~~~~~~~~-~~-~~~~~i~vGDs~~Di~~a~~~ 193 (256)
.-.|..+.-.....|.. ..+. -...+ .+ ...+++..||+..|+.|+..+
T Consensus 148 ~l~gF~~~lIH~~NKn~-~~l~-~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 148 VLVGFKGPLIHTFNKNE-SALE-DSPYFKQLKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp BEEEE-SS---TT-HHH-HHHT-THHHHHCTTT--EEEEEESSSGGGGTTTT-
T ss_pred eEeecCCCceEEeeCCc-cccc-CchHHHHhccCCcEEEecCccCChHhhcCC
Confidence 00001111111112221 1221 11111 23 457899999999999998877
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.041 Score=54.22 Aligned_cols=49 Identities=16% Similarity=0.225 Sum_probs=37.1
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeCCcCchHHhH
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALENVNNLPQVV 223 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~~~~el~~~l 223 (256)
.-+++|||+.||+.|.+.|.++.-..+... ....+|+.+..+.-|..+|
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLL 922 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLL 922 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHH
Confidence 458999999999999999977762222221 2356999999998887766
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.063 Score=44.02 Aligned_cols=14 Identities=43% Similarity=0.501 Sum_probs=12.2
Q ss_pred eEEEEecCCCccCC
Q 025190 6 NCLVFDLDDTLYPS 19 (256)
Q Consensus 6 k~viFD~DGTL~d~ 19 (256)
.+|+||+||||++.
T Consensus 15 ~li~~D~DGTLl~~ 28 (266)
T PRK10187 15 YAWFFDLDGTLAEI 28 (266)
T ss_pred EEEEEecCCCCCCC
Confidence 57899999999875
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.18 Score=41.15 Aligned_cols=68 Identities=22% Similarity=0.261 Sum_probs=44.0
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcC---CeEEEEcCCCCCCCCCeeeCCcCchHHhHHHH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALG---LRTVLVGKTVNVGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G---~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~ 226 (256)
..|...+++++++......-+++.||...|-.+.+.+. -.++-+..+ ...+++...........+..+
T Consensus 181 ~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~--~t~a~~~~~~~~~~~~~l~~~ 251 (266)
T COG1877 181 VSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG--STQAKFRLAGVYGFLRSLYKL 251 (266)
T ss_pred cchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC--cccccccccccHHHHHHHHHH
Confidence 34778889899888776667999999999977777665 445555544 333444444444444444433
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.18 Score=42.86 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHcCCCCC---cEEEEcCCccccHHHHHc-----CCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 158 PSMDAMKLALHVANVDPR---HALFLDDNIKNVTAGKAL-----GLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~~---~~i~vGDs~~Di~~a~~~-----G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
.|..+++.+++.++.... -++|+||-.+|-.+.+.+ |+ .+.|+.......|.|.+.+..++.++|..+.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~ 345 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAKETNASYSLQEPDEVMEFLERLV 345 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCCCCcceEeCCCHHHHHHHHHHHH
Confidence 567889999999876433 289999999998777754 32 3455544445679999999999999998764
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.28 Score=41.95 Aligned_cols=70 Identities=17% Similarity=0.215 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHHcCCCC---CcEEEEcCCccccHHHHHcC----CeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHH
Q 025190 158 PSMDAMKLALHVANVDP---RHALFLDDNIKNVTAGKALG----LRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~---~~~i~vGDs~~Di~~a~~~G----~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
.|..+++.+++.++... .-.+|+||-.+|-.+.+.+. -..|.|+.......|.|.+.+..++.++|..+.
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~ 359 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLV 359 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHH
Confidence 56688999999988653 25899999999988877662 235666643445678999999999999998764
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.46 Score=38.50 Aligned_cols=112 Identities=11% Similarity=0.148 Sum_probs=65.2
Q ss_pred CCCChhHHHHHHhhhcCcE---EEec---CChHHHHHHHHhcCcccccceeEecccCCcccccCCC-CCCCCCCCCCCHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTN---SDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR-PDEFPVLLKPSMD 161 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~---~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~-~~~~~~~~Kp~~~ 161 (256)
-.++|++.+++++|+++|+ ++|| ...+.....++.+|+....+.++++...-..+..... .......+. .
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~---~ 92 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADYMNDLKLEKTVYVIGE---E 92 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHHHHhcCCCCEEEEEcC---h
Confidence 3567899999999999986 8997 4577778889999998767778887644321111100 001111112 2
Q ss_pred HHHHHHHHcCCC----CCcEEEEcCCc-cc---cHHH---HHcCCeEEEEcCC
Q 025190 162 AMKLALHVANVD----PRHALFLDDNI-KN---VTAG---KALGLRTVLVGKT 203 (256)
Q Consensus 162 ~~~~~~~~~~~~----~~~~i~vGDs~-~D---i~~a---~~~G~~~v~v~~~ 203 (256)
.+...++.+|+. ..+.|++|... .+ +..| .+.|...+..+..
T Consensus 93 ~l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~D 145 (249)
T TIGR01457 93 GLKEAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNGD 145 (249)
T ss_pred hHHHHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECCC
Confidence 355666666643 22456666543 22 2212 1347776655543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.2 Score=42.52 Aligned_cols=44 Identities=16% Similarity=0.293 Sum_probs=32.0
Q ss_pred CCCCCHHHHHHHHHHcC----CCCCcEEEEcCC---------------ccccHHHHHcCCeEE
Q 025190 155 LLKPSMDAMKLALHVAN----VDPRHALFLDDN---------------IKNVTAGKALGLRTV 198 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~----~~~~~~i~vGDs---------------~~Di~~a~~~G~~~v 198 (256)
.+||...+..+..+.++ +.-..++++||- ..|+..|.++|+.+.
T Consensus 168 yRKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 168 YRKPSTGMWEFLKRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred ccCcchhHHHHHHHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 38999999999988764 233445677763 247888999988764
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=93.20 E-value=4 Score=36.38 Aligned_cols=77 Identities=12% Similarity=-0.060 Sum_probs=43.0
Q ss_pred EEEecCChHHHHHHHHh-cCcccccceeEecccCC--cccccCCCCCCCCCCCCCCHHH-HHHHHHHcCCCCCcEEEEcC
Q 025190 107 IIFTNSDRNHAITCLKR-LEIADCFDQIICFETMN--PNLSKATRPDEFPVLLKPSMDA-MKLALHVANVDPRHALFLDD 182 (256)
Q Consensus 107 ~ivs~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~--~~~~~~~~~~~~~~~~Kp~~~~-~~~~~~~~~~~~~~~i~vGD 182 (256)
+++|......++..++. +|.+.. ++.+-.- .++|+|.-. ++...+. ...+.+.++- ....+-+||
T Consensus 112 vVVTAsPrvmVEpFake~LG~D~V----vGTEL~v~~~G~~TG~~~------G~n~~ek~~~rl~~~~g~-~~~~vg~~~ 180 (498)
T PLN02499 112 VVVTRMPRVMVERFAKEHLRADEV----IGSELVVNRFGFATGFIR------GTDVDQSVANRVANLFVD-ERPQLGLGR 180 (498)
T ss_pred EEEeCCHHHHHHHHHHHhcCCceE----EeeeEEEeeccEEEEEEe------cCccHHHHHHHHHHHhCc-cCceecccC
Confidence 38999999999999998 886543 2221100 011222111 1111233 4445555663 345788999
Q ss_pred CccccHHHHHcC
Q 025190 183 NIKNVTAGKALG 194 (256)
Q Consensus 183 s~~Di~~a~~~G 194 (256)
+..|-....-|.
T Consensus 181 ~~~~~~f~~~ck 192 (498)
T PLN02499 181 ISASSSFLSLCK 192 (498)
T ss_pred CcccchhhhhCc
Confidence 887766665554
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.091 Score=41.01 Aligned_cols=27 Identities=30% Similarity=0.454 Sum_probs=18.0
Q ss_pred EEEEecCCCccCCC-ccHHHHHHHHHHH
Q 025190 7 CLVFDLDDTLYPSE-TGIAAAVKRNIEG 33 (256)
Q Consensus 7 ~viFD~DGTL~d~~-~~~~~~~~~~~~~ 33 (256)
+|+||+||||++.. ........+++++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~ 28 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALER 28 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence 47899999999875 3444444454444
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=91.67 E-value=0.44 Score=44.98 Aligned_cols=36 Identities=28% Similarity=0.448 Sum_probs=26.1
Q ss_pred CCChhHHHHHHhhhcC-cE---EEecCChHHHHHHHHhcC
Q 025190 90 KPDPQLRNLLCSITQR-KI---IFTNSDRNHAITCLKRLE 125 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~-~~---ivs~~~~~~~~~~l~~~g 125 (256)
.+-+.+.+.|+.|.+. |+ ++|+.....++..+..++
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~ 553 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLP 553 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 3446677888888873 43 899998888887776554
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.65 E-value=0.5 Score=40.76 Aligned_cols=36 Identities=8% Similarity=0.100 Sum_probs=26.7
Q ss_pred CCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhc
Q 025190 89 IKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRL 124 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~ 124 (256)
..+.|++.+.|+.|.+.. + |||+.....+...+...
T Consensus 140 A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~~ 177 (384)
T PLN02580 140 ALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGLT 177 (384)
T ss_pred ccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCCC
Confidence 355667888888887664 3 99999999888777543
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.09 E-value=0.89 Score=42.78 Aligned_cols=121 Identities=12% Similarity=0.011 Sum_probs=71.1
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccc--eeEecccCCcccccC-----CCCCCCCCCCCC-
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFD--QIICFETMNPNLSKA-----TRPDEFPVLLKP- 158 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~~~~~-----~~~~~~~~~~Kp- 158 (256)
+..||+++.++.|++.|+ .||+..-.-++.+...-|+-..-+ .++.+..... +... |.--..+-...|
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~-~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRE-LSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhh-cCHHHHHhhhhhheeeecCCCc
Confidence 678999999999999998 899998888898888888654322 1222211110 0000 000000111122
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeeeC
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYALE 214 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~~ 214 (256)
+...+-+.+.+.| +=+.+-||+.||-.+.+.|.++.++--.+ ..+...|.++-
T Consensus 726 DK~lLVk~L~~~g---~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~ 780 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQG---EVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIIL 780 (1034)
T ss_pred hHHHHHHHHHhcC---cEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEE
Confidence 2222333333221 23456799999999999999887765433 34556777764
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.57 E-value=1.1 Score=36.40 Aligned_cols=111 Identities=12% Similarity=0.080 Sum_probs=59.8
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHH---HHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHA---ITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~---~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.++||+.++++.|+++|+ ++||+..... ...++.+|++---+.++++...-..+............+. ..+
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~---~~l 93 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGE---GAL 93 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcC---HHH
Confidence 568999999999999886 8999866544 4456667875444666666433211111100000111111 234
Q ss_pred HHHHHHcCCC----CCcEEEEcCCcc-cc---HHHH---HcCCeEEEEcCC
Q 025190 164 KLALHVANVD----PRHALFLDDNIK-NV---TAGK---ALGLRTVLVGKT 203 (256)
Q Consensus 164 ~~~~~~~~~~----~~~~i~vGDs~~-Di---~~a~---~~G~~~v~v~~~ 203 (256)
...++..|+. ..++|++|...+ +. ..|. +.|...+..+..
T Consensus 94 ~~~l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n~D 144 (248)
T PRK10444 94 IHELYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD 144 (248)
T ss_pred HHHHHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4444555543 235777887663 32 2221 347776665543
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.53 E-value=0.68 Score=39.47 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=24.0
Q ss_pred CCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLK 122 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~ 122 (256)
.+.|+..+.|+.|.+.. + |+|+.....+...+.
T Consensus 120 ~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 120 FMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 45677777888877542 2 899998888877764
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=90.06 E-value=2.1 Score=34.33 Aligned_cols=52 Identities=23% Similarity=0.178 Sum_probs=36.6
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCC---hHHHHHHHHh-cCcccccceeEeccc
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKR-LEIADCFDQIICFET 138 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~---~~~~~~~l~~-~gl~~~f~~i~~~~~ 138 (256)
..-.++|++.+.++.++++|+ ++||+. .......+.. +|+.--.+.++++..
T Consensus 11 ~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~ 69 (236)
T TIGR01460 11 LGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGS 69 (236)
T ss_pred cCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHH
Confidence 445679999999999998876 888764 3334444555 787655677777643
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=88.59 E-value=0.44 Score=38.84 Aligned_cols=49 Identities=14% Similarity=0.202 Sum_probs=37.7
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChH---HHHHHHHhcCcccccceeEeccc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLEIADCFDQIICFET 138 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~---~~~~~l~~~gl~~~f~~i~~~~~ 138 (256)
.++|++.++++.|+++|+ ++||+... .....++.+|++--.+.++++..
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~~ 75 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPAP 75 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHH
Confidence 478899999999999986 89987544 46667888898744566777653
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=88.48 E-value=1.2 Score=42.70 Aligned_cols=32 Identities=9% Similarity=0.208 Sum_probs=20.6
Q ss_pred ChhHHHHHHhh-hcCcE---EEecCChHHHHHHHHh
Q 025190 92 DPQLRNLLCSI-TQRKI---IFTNSDRNHAITCLKR 123 (256)
Q Consensus 92 ~pg~~~~l~~l-~~~~~---ivs~~~~~~~~~~l~~ 123 (256)
-|++.++|+.| +..+. |+|+.....++..+..
T Consensus 618 ~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 618 SSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 35666777776 33332 7888877777776654
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=88.33 E-value=0.34 Score=38.81 Aligned_cols=18 Identities=39% Similarity=0.696 Sum_probs=14.1
Q ss_pred EEEEecCCCccCCCccHH
Q 025190 7 CLVFDLDDTLYPSETGIA 24 (256)
Q Consensus 7 ~viFD~DGTL~d~~~~~~ 24 (256)
+|++|+||||++.+..+.
T Consensus 1 li~~DlDgTLl~~~~~~~ 18 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLA 18 (236)
T ss_pred CeEEeccccccCCHHHHH
Confidence 478999999998765443
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=87.70 E-value=1.9 Score=42.12 Aligned_cols=76 Identities=11% Similarity=0.091 Sum_probs=52.6
Q ss_pred hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcE-EEEcCCcc-ccHHHH
Q 025190 114 RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHA-LFLDDNIK-NVTAGK 191 (256)
Q Consensus 114 ~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~-i~vGDs~~-Di~~a~ 191 (256)
.+.++..|+..++.. ..+++.+.... ..++..-.+..++++++.++|++.+++ +++|||-+ |.+...
T Consensus 923 v~elr~~Lr~~gLr~--~~iys~~~~~L---------DVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll 991 (1050)
T TIGR02468 923 VKELRKLLRIQGLRC--HAVYCRNGTRL---------NVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLL 991 (1050)
T ss_pred HHHHHHHHHhCCCce--EEEeecCCcEe---------eeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHh
Confidence 466777888888763 34555431111 334446678899999999999999999 55999998 988764
Q ss_pred HcCCeEEEE
Q 025190 192 ALGLRTVLV 200 (256)
Q Consensus 192 ~~G~~~v~v 200 (256)
.--.++|.+
T Consensus 992 ~G~~~tvi~ 1000 (1050)
T TIGR02468 992 GGLHKTVIL 1000 (1050)
T ss_pred CCceeEEEE
Confidence 444445544
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.32 E-value=1.3 Score=40.82 Aligned_cols=113 Identities=12% Similarity=0.250 Sum_probs=63.9
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHh--cCcccccceeEecccCCcccccCCCCCCCCCCCCC--CHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR--LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP--SMDA 162 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~--~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp--~~~~ 162 (256)
.-..++..-|..|+.++. ++++.+.+..-...+. ..+-.-...++++ .+-| |+++
T Consensus 711 ~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~C------------------RctPtQKA~v 772 (1051)
T KOG0210|consen 711 TSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCC------------------RCTPTQKAQV 772 (1051)
T ss_pred CCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEE------------------ecChhHHHHH
Confidence 444567777788877643 5555555444333322 1121222334432 1333 3333
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC--CCCCCeeeCCcCchHHhH
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN--VGEADYALENVNNLPQVV 223 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~--~~~~~~~~~~~~el~~~l 223 (256)
...+.++-+ ..+.+|||+-||+.|...+..+.-.++...+ ...+|+-+..+.-+.++|
T Consensus 773 ~~llq~~t~---krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 773 VRLLQKKTG---KRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred HHHHHHhhC---ceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHh
Confidence 333333333 6799999999999998777555444443333 356899988887776655
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=86.37 E-value=0.45 Score=38.40 Aligned_cols=16 Identities=31% Similarity=0.366 Sum_probs=13.4
Q ss_pred CCeEEEEecCCCccCC
Q 025190 4 PFNCLVFDLDDTLYPS 19 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~ 19 (256)
+.++++||+||||++.
T Consensus 2 ~~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEI 17 (244)
T ss_pred CcEEEEEecCccccCC
Confidence 4578999999999974
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=86.21 E-value=6.6 Score=31.86 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=54.2
Q ss_pred CChhHHHHHHhhhcCc------E---EEecCChHHHHHHHH---hcCcccccceeEecccCCcccccCCCCCCCCCCCCC
Q 025190 91 PDPQLRNLLCSITQRK------I---IFTNSDRNHAITCLK---RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP 158 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~------~---ivs~~~~~~~~~~l~---~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp 158 (256)
|+....+-|.+++++- + +||..+....++.++ ..|+. +|..+.-. +-+
T Consensus 165 P~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLg------------------G~~ 224 (264)
T PF06189_consen 165 PFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLG------------------GLP 224 (264)
T ss_pred CHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhC------------------CCc
Confidence 4455555566665541 2 899886666566554 44554 55544322 334
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN 205 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~ 205 (256)
|. .+++.++= -|+++|....++.|. .+.+++.|+++..
T Consensus 225 K~----~vL~~~~p----hIFFDDQ~~H~~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 225 KG----PVLKAFRP----HIFFDDQDGHLESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred hh----HHHHhhCC----CEeecCchhhhhHhh-cCCCEEeccCCcC
Confidence 33 44555443 489999999999998 7888988887653
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.35 E-value=4.2 Score=31.89 Aligned_cols=46 Identities=17% Similarity=0.243 Sum_probs=32.1
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHH---HHHHhcCcccccceeEe
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAI---TCLKRLEIADCFDQIIC 135 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~---~~l~~~gl~~~f~~i~~ 135 (256)
...||+.+.++.|+.++. .+||...+.-+ +.|+++|++---+.|++
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~t 74 (262)
T KOG3040|consen 23 AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFT 74 (262)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcC
Confidence 478999999999996654 89998655544 45667776533344554
|
|
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.36 E-value=4.7 Score=28.84 Aligned_cols=81 Identities=12% Similarity=0.136 Sum_probs=57.9
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecC-ChHHHHHHHHhcCccc---------ccceeEecccCCcccccCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNS-DRNHAITCLKRLEIAD---------CFDQIICFETMNPNLSKATRPDEFP 153 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~-~~~~~~~~l~~~gl~~---------~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (256)
..+..|++++..|..|+++|+ ++|++ ....+.+.|+.+.+.. .|+.+..++
T Consensus 41 ~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~---------------- 104 (144)
T KOG4549|consen 41 EEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGD---------------- 104 (144)
T ss_pred ceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecC----------------
Confidence 456788999999999999998 66766 4555677888776543 233333322
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccc
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNIKN 186 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~D 186 (256)
..+...|+.+-+..++...+..++.|-..+
T Consensus 105 ---gsklghfke~~n~s~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 105 ---GSKLGHFKEFTNNSNSIEKNKQVFDDESRN 134 (144)
T ss_pred ---cccchhHHHHhhccCcchhceeeecccccC
Confidence 334467788888889888888899887755
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=81.69 E-value=3.1 Score=39.81 Aligned_cols=72 Identities=11% Similarity=0.039 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHc------CCCCCcEEEEcCCc-cccHHHHHcCCeE------------------------------EEE
Q 025190 158 PSMDAMKLALHVA------NVDPRHALFLDDNI-KNVTAGKALGLRT------------------------------VLV 200 (256)
Q Consensus 158 p~~~~~~~~~~~~------~~~~~~~i~vGDs~-~Di~~a~~~G~~~------------------------------v~v 200 (256)
.|..+++.+++++ +-.++=++++||.. .|=.+.+.++-.. +.+
T Consensus 678 nKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 757 (797)
T PLN03063 678 TKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSC 757 (797)
T ss_pred ChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEE
Confidence 4667788888765 23456688999975 4766666554211 222
Q ss_pred cCCCCCCCCCeeeCCcCchHHhHHHHHhc
Q 025190 201 GKTVNVGEADYALENVNNLPQVVPEIWVS 229 (256)
Q Consensus 201 ~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 229 (256)
.-|.....|.|.+++..|+.++|..+...
T Consensus 758 ~VG~~~s~A~y~l~~~~eV~~lL~~l~~~ 786 (797)
T PLN03063 758 AIGQARTKARYVLDSSNDVVSLLHKLAVA 786 (797)
T ss_pred EECCCCccCeecCCCHHHHHHHHHHHhcc
Confidence 22345677999999999999999887643
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=81.69 E-value=5.1 Score=33.84 Aligned_cols=87 Identities=17% Similarity=0.157 Sum_probs=56.7
Q ss_pred CCCCCCChhHHHHHHhhhcC----cE---EEecCC---hHH-HHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 86 YDLIKPDPQLRNLLCSITQR----KI---IFTNSD---RNH-AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~----~~---ivs~~~---~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
+..-.++||+.++++.|+.+ |+ ++||+. ... .+.+.+.+|+.--.+.++++.
T Consensus 12 ~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~----------------- 74 (321)
T TIGR01456 12 FRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH----------------- 74 (321)
T ss_pred ECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh-----------------
Confidence 34557799999999999987 75 899885 333 333447888753334454421
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEE
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVL 199 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~ 199 (256)
......+++++ ..+++||.+. -...++.+|+..+.
T Consensus 75 ------~~~~~ll~~~~---~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 75 ------SPYKSLVNKYE---KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred ------HHHHHHHHHcC---CceEEEeChH-HHHHHHHcCCcccc
Confidence 23455555553 2688898764 46777788987653
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=81.67 E-value=1.6 Score=37.36 Aligned_cols=13 Identities=31% Similarity=0.350 Sum_probs=10.9
Q ss_pred CeEEEEecCCCcc
Q 025190 5 FNCLVFDLDDTLY 17 (256)
Q Consensus 5 ~k~viFD~DGTL~ 17 (256)
-.+|++|+||||+
T Consensus 111 ~~llflD~DGTL~ 123 (366)
T PLN03017 111 QIVMFLDYDGTLS 123 (366)
T ss_pred CeEEEEecCCcCc
Confidence 3567889999999
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=81.28 E-value=2.9 Score=33.67 Aligned_cols=103 Identities=9% Similarity=0.044 Sum_probs=58.5
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcC-cccccceeEecccCCcccccCCCC----CCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLE-IADCFDQIICFETMNPNLSKATRP----DEFPVLLKP 158 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~g-l~~~f~~i~~~~~~~~~~~~~~~~----~~~~~~~Kp 158 (256)
..+.+..|+.+++..|+++++ +.|.+--..++.++++.. +.+ + .-+++.-... -+.+.-+ .-...+.|.
T Consensus 135 s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p-n-~k~vSN~~~F-~edg~l~gF~~~Lihtfnkn 211 (298)
T KOG3128|consen 135 SNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP-N-VKFVSNYMDF-DEDGNLCGFSQPLIHTFNKN 211 (298)
T ss_pred hhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc-c-HHhhhhhhhh-cccchhhhhhHHHHHHHccc
Confidence 445667899999999999998 899998888888776543 332 1 1111111100 0000000 000001111
Q ss_pred CHHHHHHHHHHcCC--CCCcEEEEcCCccccHHHHHc
Q 025190 159 SMDAMKLALHVANV--DPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 159 ~~~~~~~~~~~~~~--~~~~~i~vGDs~~Di~~a~~~ 193 (256)
...++...+.++. ...++++.||+.-|+.+|..+
T Consensus 212 -~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 212 -SSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred -hHHHHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 1223333444432 467899999999999998765
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=80.77 E-value=4.1 Score=39.48 Aligned_cols=37 Identities=19% Similarity=0.398 Sum_probs=28.6
Q ss_pred CCCChhHHHHHHhhhcC--c-E-EEecCChHHHHHHHHhcC
Q 025190 89 IKPDPQLRNLLCSITQR--K-I-IFTNSDRNHAITCLKRLE 125 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~--~-~-ivs~~~~~~~~~~l~~~g 125 (256)
..|.|++.++|+.|.+. + + |||+.....++..+...+
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 35678888899888764 3 2 999999999888887654
|
|
| >PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function | Back alignment and domain information |
|---|
Probab=80.34 E-value=0.7 Score=28.46 Aligned_cols=25 Identities=8% Similarity=0.260 Sum_probs=15.6
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHH
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGK 191 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~ 191 (256)
+.+.++++|+ .|++||...|+++..
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 4578888888 899999999998765
|
; PDB: 2NN4_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 256 | ||||
| 3onn_A | 263 | Crystal Structure Of 5'-Nucleotidase Sdt1 From Sacc | 7e-19 | ||
| 3nuq_A | 282 | Structure Of A Putative Nucleotide Phosphatase From | 1e-18 | ||
| 3opx_A | 263 | Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt | 6e-18 | ||
| 2hoq_A | 241 | Crystal Structure Of The Probable Haloacid Dehaloge | 2e-05 |
| >pdb|3ONN|A Chain A, Crystal Structure Of 5'-Nucleotidase Sdt1 From Saccharomyces Cerevisiae Length = 263 | Back alignment and structure |
|
| >pdb|3NUQ|A Chain A, Structure Of A Putative Nucleotide Phosphatase From Saccharomyces Cerevisiae Length = 282 | Back alignment and structure |
|
| >pdb|3OPX|A Chain A, Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt1 From Saccharomyces Cerevisiae Complexed With Uridine 5'-Monophosphate Length = 263 | Back alignment and structure |
|
| >pdb|2HOQ|A Chain A, Crystal Structure Of The Probable Haloacid Dehalogenase (Ph1655) From Pyrococcus Horikoshii Ot3 Length = 241 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 256 | |||
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 4e-43 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 2e-18 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 5e-17 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 2e-14 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 5e-14 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 2e-13 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 8e-13 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 2e-12 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 2e-11 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 3e-11 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 1e-10 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 2e-10 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 7e-10 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 9e-10 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 1e-09 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 1e-09 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 2e-09 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 2e-09 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 3e-09 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 3e-09 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 4e-09 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 4e-09 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 1e-08 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 1e-08 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 1e-08 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 2e-08 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 9e-08 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 1e-07 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 2e-07 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 2e-07 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 4e-07 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 8e-07 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 1e-06 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 2e-06 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 2e-06 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 2e-06 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 2e-06 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 3e-06 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 4e-06 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 5e-06 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 5e-06 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 6e-06 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 7e-06 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 8e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-06 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 2e-05 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 2e-05 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 9e-05 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 1e-04 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 1e-04 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 2e-04 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 3e-04 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 3e-04 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 9e-04 |
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 4e-43
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 25/240 (10%)
Query: 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL 61
+ FD+D+ LY S T I ++++I F S A L +K YG +
Sbjct: 54 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAI 113
Query: 62 AGLRALGYDIGADDYHGFVHGRLPY-DLIKPDPQLRNLLCSITQ-----RKIIFTNSDRN 115
GL + + A +Y+ V LP D++KPD LRN+L + Q + +FTN+ +N
Sbjct: 114 RGLVM-FHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKN 172
Query: 116 HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP- 174
HAI CL+ L IAD FD + + + ++ KP + A + A+ + +
Sbjct: 173 HAIRCLRLLGIADLFDGLTYCDYSRTD----------TLVCKPHVKAFEKAMKESGLARY 222
Query: 175 RHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGE-------ADYALENVNNLPQVVPEIW 227
+A F+DD+ KN+ G LG++T + V E + ++ LP VV +++
Sbjct: 223 ENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF 282
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 80.6 bits (199), Expect = 2e-18
Identities = 54/242 (22%), Positives = 85/242 (35%), Gaps = 42/242 (17%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL------ 61
+ FDLDDTL + A K IE + A S +EL K YGS
Sbjct: 5 IFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDY 64
Query: 62 ------AGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNS 112
G YH + ++ P R +L + + I T+
Sbjct: 65 LLRRLDLPYNPKWISAGVIAYH-----NTKFAYLREVPGARKVLIRLKELGYELGIITDG 119
Query: 113 DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANV 172
+ + RLE+ D F+ +I + KP K AL NV
Sbjct: 120 NPVKQWEKILRLELDDFFEHVIISDFEGVK--------------KPHPKIFKKALKAFNV 165
Query: 173 DPRHALFLDDNIKN-VTAGKALGLRTVLVGKTVNVGE-------ADYALENVNNLPQVVP 224
P AL + D + + + K +G++TV + ADY ++N+ +L +V+
Sbjct: 166 KPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVLA 225
Query: 225 EI 226
Sbjct: 226 RE 227
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 77.0 bits (189), Expect = 5e-17
Identities = 30/238 (12%), Positives = 71/238 (29%), Gaps = 43/238 (18%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASS----LRVELFKAYGSTLAG 63
+ FD DDTL+ SE A E L +++ + K +G G
Sbjct: 16 VGFDGDDTLWKSEDYYRTAEAD-FEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKG 74
Query: 64 LRALGYDIGADDYHGFVHGRLPYDL-----------IKPDPQLRNLLCSITQ--RKIIFT 110
+ + + + R + ++ +R + +I ++ T
Sbjct: 75 MTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAIAADYAVVLIT 134
Query: 111 NSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA 170
D H +++ ++D F +I + L
Sbjct: 135 KGDLFHQEQKIEQSGLSDLFPRIEVVS-------------------EKDPQTYARVLSEF 175
Query: 171 NVDPRHALFLDDNIK-NVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIW 227
++ + + ++++ +V A+G + +A E + + P +
Sbjct: 176 DLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPY-----AVTWAHEQDHGVAADEPRLR 228
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-14
Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 19/195 (9%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
L +D+ L + + F ++ F+E + EL + L +
Sbjct: 7 LFWDIGGVLLTNG-WDREQRADVAQRFGLDTDDFTE-RHRLAAPELELGRMTLAEYLEQV 64
Query: 68 GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQR-KI-IFTNSDRNHAITCLKRLE 125
+ D + + +P P++ L + QR ++ N R+ ++
Sbjct: 65 VFYQPRDFTPEDFRAVME-EQSQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFG 123
Query: 126 IADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIK 185
+ + + ++KP+ +L L +A V P A+ +DD ++
Sbjct: 124 LGEFLLAFFTSSALG--------------VMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQ 169
Query: 186 NVTAGKALGLRTVLV 200
NV A +A+G+ V
Sbjct: 170 NVQAARAVGMHAVQC 184
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 5e-14
Identities = 32/141 (22%), Positives = 51/141 (36%), Gaps = 27/141 (19%)
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAIT 119
G+R L DY G + G + + RNLL + + + I +N
Sbjct: 1 GMRGL-----IVDYAGVLDGT-----DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAA 50
Query: 120 CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALF 179
++ LE D+++ S E V KP A + A ++ R +
Sbjct: 51 PIRELETNGVVDKVLL--------S-----GELGVE-KPEEAAFQAAADAIDLPMRDCVL 96
Query: 180 LDDNIKNVTAGKALGLRTVLV 200
+DD+I NV GL V
Sbjct: 97 VDDSILNVRGAVEAGLVGVYY 117
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 2e-13
Identities = 34/246 (13%), Positives = 72/246 (29%), Gaps = 45/246 (18%)
Query: 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA---- 62
+ FD+ +TL + + L + G ++ +E+ A
Sbjct: 6 LVTFDVWNTLLDLNIMLDEFSHQ-----LAKISGLHIKDVANAVIEVRNEIKKMRAQASE 60
Query: 63 --------GLRALGYDIGADD---YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---I 108
AL + D L D + L + +R + +
Sbjct: 61 DPRKVLTGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAV 120
Query: 109 FTNSDRN---HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165
N + L+R + + D+ + E KP + +
Sbjct: 121 IGNVMFWPGSYTRLLLERFGLMEFIDKTFFAD-------------EVLS-YKPRKEMFEK 166
Query: 166 ALHVANVDPRHALFLDDNIKN-VTAGKALGLRTVLVGKTVNVG----EADYALENVNNLP 220
L+ V P +L + D + +G+ V + + + E + + ++ NL
Sbjct: 167 VLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLK 226
Query: 221 QVVPEI 226
V+ I
Sbjct: 227 DVIELI 232
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 8e-13
Identities = 46/241 (19%), Positives = 81/241 (33%), Gaps = 38/241 (15%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKA--SSLRVELFKAYGSTL---- 61
+ FD TL E + +K E L E F Y
Sbjct: 5 VFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPL 64
Query: 62 ---------AGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQR-KI-IFT 110
G+ + + + + P++ +L S+ + + + T
Sbjct: 65 RDILEEVMRKLAEKYGFKYPENFWEISLRMS--QRYGELYPEVVEVLKSLKGKYHVGMIT 122
Query: 111 NSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA 170
+SD A+ L L I D FD I E E KP +LAL A
Sbjct: 123 DSDTEQAMAFLDALGIKDLFDSITTSE-------------EAGF-FKPHPRIFELALKKA 168
Query: 171 NVDPRHALFLDDNIKN-VTAGKALGLRTVLV---GKTVNVG-EADYALENVNNLPQVVPE 225
V A+++ DN K LG+ ++L+ G+ + D+ + ++ + ++V E
Sbjct: 169 GVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDE 228
Query: 226 I 226
+
Sbjct: 229 L 229
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 2e-12
Identities = 36/248 (14%), Positives = 75/248 (30%), Gaps = 45/248 (18%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIE------GFLIEKCGFSETKASSLRVELFKAYGSTL 61
+ FDLD+TL + + I+ + E + L E F Y + +
Sbjct: 21 VFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCI 80
Query: 62 AGLRAL--------------GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQR-K 106
+R + + Y + R + ++ +L + + +
Sbjct: 81 TDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTR--LQHMILADDVKAMLTELRKEVR 138
Query: 107 I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165
+ + TN DR ++ FD I+ KP+
Sbjct: 139 LLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEE--------------KPAPSIFYH 184
Query: 166 ALHVANVDPRHALFLDDNIKN-VTAGKALGLRTVL------VGKTVNVGEADYALENVNN 218
+ V P + + D ++ + G GL+ + + Y + +V
Sbjct: 185 CCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLE 244
Query: 219 LPQVVPEI 226
LP ++ I
Sbjct: 245 LPALLQSI 252
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-11
Identities = 39/245 (15%), Positives = 80/245 (32%), Gaps = 47/245 (19%)
Query: 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKA----SSLRVELFKAYGS--- 59
L FDLDDT++ + + + ++ S EL+ YG
Sbjct: 7 NLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKV 66
Query: 60 TLAGLR---------ALGYDIG------ADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQ 104
T L A+G + ++D+ + P + +L +
Sbjct: 67 TKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIP-----TKSGLMPHAKEVLEYLAP 121
Query: 105 R-KI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162
+ + I +N R ++ + F +II E + KP +
Sbjct: 122 QYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVL--------------KPRPEI 167
Query: 163 MKLALHVANVDPRHALFLDDNIKN-VTAGKALGLRTVLV---GKTVNVGEADYALENVNN 218
AL + R +L + D+ + +T +G+ +TV + Y + ++
Sbjct: 168 FHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKE 227
Query: 219 LPQVV 223
L ++
Sbjct: 228 LMNLL 232
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 3e-11
Identities = 39/244 (15%), Positives = 77/244 (31%), Gaps = 35/244 (14%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS--- 59
+ L+FD+DDT+ + A A++ E I + + ++ L++A+
Sbjct: 5 KRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKM 64
Query: 60 TLAGLR---------ALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRK--II 108
T + GY+ L + + +L+ ++ Q+ I
Sbjct: 65 TRDEVVNTRFSALLKEYGYEADGALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQFDLYI 123
Query: 109 FTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLAL- 167
TN + L+ + F I E KP +
Sbjct: 124 VTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQ--------------KPMKEYFNYVFE 169
Query: 168 HVANVDPRHALFLDDNIKN-VTAGKALGLRTVLV--GKTVNVGE--ADYALENVNNLPQV 222
+ H L + D++ + G+ GL T + NV E Y + + L +
Sbjct: 170 RIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHI 229
Query: 223 VPEI 226
+
Sbjct: 230 LNIE 233
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 1e-10
Identities = 32/216 (14%), Positives = 55/216 (25%), Gaps = 27/216 (12%)
Query: 8 LVFDLDDTLYPSETGIAAAVKR---NIEGFLIEKCGFSETKASSLRVELFKAYGS----T 60
VFD TL + + + E + S L Y T
Sbjct: 17 CVFDAYGTLLDVHSAVMRNADEVGASAEALSML--WRQRQLEYSWTRTLMHQYADFWQLT 74
Query: 61 LAGLR----ALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNH 116
L + + + L S I +N +
Sbjct: 75 DEALTFALRTYHLEDRKGLKDRLMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEM 134
Query: 117 AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRH 176
LK ++ D + D+ + KP + A V+P
Sbjct: 135 LQAALKASKLDRVLDSCLS-------------ADDLKI-YKPDPRIYQFACDRLGVNPNE 180
Query: 177 ALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYA 212
F+ N ++ G TV + + N E ++A
Sbjct: 181 VCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFA 216
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 59.4 bits (143), Expect = 2e-10
Identities = 28/250 (11%), Positives = 74/250 (29%), Gaps = 31/250 (12%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKAS--SLRVELFKAYGSTLA 62
+ LD+ AA + + K + +L E+++ +
Sbjct: 130 EQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSK 189
Query: 63 GLRAL-GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAI 118
+ G+++ +++P +++ LL + I T +
Sbjct: 190 LYEDVEKKIARTTFKTGYIYQ---EIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETV 246
Query: 119 TCLKRLEIADCFDQIICF--------ETMNPNLSKATRPDEFPVL-----LKPSMDAMKL 165
+ L + F+ E M P +P+ F + +
Sbjct: 247 VPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYI 306
Query: 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGE---------ADYALENV 216
V+ + D++ ++ + + +G + + + ADY + ++
Sbjct: 307 NKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
Query: 217 NNLPQVVPEI 226
L V+ +
Sbjct: 367 GELRGVLDNL 376
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 7e-10
Identities = 37/232 (15%), Positives = 69/232 (29%), Gaps = 32/232 (13%)
Query: 8 LVFDLDDTLYPSETGIAAAVK---RNIEGFLIEKCGFSETKASSLRVELFKAYGS----T 60
+ FDL TL+ + + + + + L Y + T
Sbjct: 7 IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALW--RQKQLEYTWLRSLMNRYVNFQQAT 64
Query: 61 LAGLR----ALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNH 116
LR LG D+ A L P L + I +N
Sbjct: 65 EDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQS 124
Query: 117 AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRH 176
+ + D FD ++ + + + KP +LA +D
Sbjct: 125 IDAVVSHAGLRDGFDHLLSVDPVQ--------------VYKPDNRVYELAEQALGLDRSA 170
Query: 177 ALFLDDNIKNVTAGKALGLRTVLVGKTVNV-----GEADYALENVNNLPQVV 223
LF+ N + T + G T + +T NV D+ + ++ + ++
Sbjct: 171 ILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELF 222
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 9e-10
Identities = 40/239 (16%), Positives = 64/239 (26%), Gaps = 33/239 (13%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
P +FDLD TL S AA K ++ R +
Sbjct: 4 RPQTSFIFDLDGTLTDSVYQNVAAWKE-----ALDAENIPLAMWRIHRKIGMSGGLMLKS 58
Query: 63 GLRALGYDIGADDYHGFVHGRLPY-----DLIKPDPQLRNLLCSITQRKI---IFTNSDR 114
R G I + I P LL ++ + + I T+
Sbjct: 59 LSRETGMSITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGI 118
Query: 115 NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174
+ A LK L++ I+ + + KP D A
Sbjct: 119 DTATINLKALKLDINKINIVTRDD-------VSYG-------KPDPDLFLAAAKKIGAPI 164
Query: 175 RHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGE------ADYALENVNNLPQVVPEIW 227
L + D I ++ A + V + A E+ +L + EI
Sbjct: 165 DECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIA 223
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-09
Identities = 35/197 (17%), Positives = 68/197 (34%), Gaps = 25/197 (12%)
Query: 9 VFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALG 68
+FD +TL + I ++++ G+ S+ Y TL G R
Sbjct: 29 IFDWYNTLIDTSINIDRTTFYQ----VLDQMGYKNIDLDSIPNSTIPKYLITLLGKR--- 81
Query: 69 YDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLE 125
+ Y + D + LL ++ + I I +N + + +
Sbjct: 82 WKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKN 141
Query: 126 IADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP-RHALFLDDNI 184
+ FD II + +KPS + + AL N++P + F+ D+I
Sbjct: 142 LTHYFDSIIG-------------SGDTGT-IKPSPEPVLAALTNINIEPSKEVFFIGDSI 187
Query: 185 KNVTAGKALGLRTVLVG 201
++ + G + G
Sbjct: 188 SDIQSAIEAGCLPIKYG 204
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 1e-09
Identities = 30/217 (13%), Positives = 60/217 (27%), Gaps = 55/217 (25%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
+VFDL L R + + E+ Y L
Sbjct: 8 IVFDLGGVLIHLNR---EESIRRFKAIGVAD-----------IEEMLDPYLQKGLFLD-- 51
Query: 68 GYDIG---ADDYHGFVHGRLPYD-------------LIKPDPQLRNLLCSITQ--RKIIF 109
+ G +++ + + + L + + + + S+ R +
Sbjct: 52 -LESGRKSEEEFRTELSRYIGKELTYQQVYDALLGFLEEISAEKFDYIDSLRPDYRLFLL 110
Query: 110 TNSDRNHAITCLKR------LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163
+N++ + + FD++ M KP+ D
Sbjct: 111 SNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMG--------------KYKPNEDIF 156
Query: 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200
+ + + P LF+DD NV + LG T
Sbjct: 157 LEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCP 193
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 2e-09
Identities = 32/218 (14%), Positives = 67/218 (30%), Gaps = 38/218 (17%)
Query: 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVEL--FKAYG 58
M + FD DDTL+ +E K+ + L E A+ + E+ + G
Sbjct: 4 MKELIKVIAFDADDTLWSNEPFFQEVEKQYTD-LLKPYGTSKEISAALFQTEMNNLQILG 62
Query: 59 STLAGLRALGYDIGADDYHGFVHGRLPYDL-----------IKPDPQLRNLLCSITQRK- 106
+ +G + + + I+ P ++ L ++ +
Sbjct: 63 YGAKAFTISMVETALQISNGKIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGK 122
Query: 107 ---IIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163
++ T D L+R ++ FD I +
Sbjct: 123 YKLVVATKGDLLDQENKLERSGLSPYFDHIEVMS-------------------DKTEKEY 163
Query: 164 KLALHVANVDPRHALFLDDNIKN-VTAGKALGLRTVLV 200
L + + P L + ++ K+ + +LG V +
Sbjct: 164 LRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHI 201
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 2e-09
Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 19/197 (9%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
+FDL + + + ++ + + + S A AL
Sbjct: 10 YIFDLGNVIVDIDFNRVLGAWSDLTRIPLASL-KKSFHMGEAFHQHERGEISDEAFAEAL 68
Query: 68 GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL 124
+++ + + P++ ++ + ++ + +N++R H +
Sbjct: 69 CHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEY 128
Query: 125 -EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDN 183
EI D D I LS+ + KP + L P +F DDN
Sbjct: 129 PEIRDAADHIY--------LSQDLG------MRKPEARIYQHVLQAEGFSPSDTVFFDDN 174
Query: 184 IKNVTAGKALGLRTVLV 200
N+ LG+ ++LV
Sbjct: 175 ADNIEGANQLGITSILV 191
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 3e-09
Identities = 48/244 (19%), Positives = 83/244 (34%), Gaps = 46/244 (18%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLR-------VELF- 54
S +N ++FDLD TL S GI +VK + K SSL F
Sbjct: 2 SLYNYVLFDLDGTLTDSAEGITKSVKY-----SLNKFDIQVEDLSSLNKFVGPPLKTSFM 56
Query: 55 KAYGSTLAGLRALGYDIGADDY--HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IF 109
+ Y D D + G + YD I+ LL S+ +
Sbjct: 57 EYYNFDEETATVA-IDYYRDYFKAKGMFENK-VYDGIEA------LLSSLKDYGFHLVVA 108
Query: 110 TNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHV 169
T+ + L+ ++A FD I+ L D ++ A+
Sbjct: 109 TSKPTVFSKQILEHFKLAFYFDAIVG-------------SSLDGK-LSTKEDVIRYAMES 154
Query: 170 ANVDPRHALFLDDNIKNVTAGKALGLRTVLV------GKTVNVGEADYALENVNNLPQVV 223
N+ A+ + D +V L ++ V + + A+Y + +V+ L + +
Sbjct: 155 LNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214
Query: 224 PEIW 227
E+
Sbjct: 215 LELR 218
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 3e-09
Identities = 50/237 (21%), Positives = 87/237 (36%), Gaps = 35/237 (14%)
Query: 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY-GSTLA 62
++FDLD TL S IA A+++ +++ G E + Y G +
Sbjct: 2 SLRVILFDLDGTLIDSAKDIALALEK-----TLKELGLEE-----YYPDNVTKYIGGGVR 51
Query: 63 GL--RALGYDIGADDYHGFVH--GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRN 115
L + L + F P KP P++ L ++ + + +N
Sbjct: 52 ALLEKVLKDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEE 111
Query: 116 HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175
+ L L ++ FD I+ D F KPS + L + +P
Sbjct: 112 LSKKILDILNLSGYFDLIVG-------------GDTFGEK-KPSPTPVLKTLEILGEEPE 157
Query: 176 HALFLDDNIKNVTAGKALGLRTVLV--GKT-VNVGEADYALENVNNLPQVVPEIWVS 229
AL + D ++ AGK G +T L G +N D+ L ++L +++ V
Sbjct: 158 KALIVGDTDADIEAGKRAGTKTALALWGYVKLNSQIPDFTLSRPSDLVKLMDNHIVE 214
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 4e-09
Identities = 42/241 (17%), Positives = 74/241 (30%), Gaps = 43/241 (17%)
Query: 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY-GSTLA 62
+ +FD D TL S GI + ++E+ G++ + ++ K G TL
Sbjct: 5 KYTVYLFDFDYTLADSSRGIVTCFRS-----VLERHGYTG-----ITDDMIKRTIGKTLE 54
Query: 63 GL--RALGYDIGADDYHGFVH------GRLPYDLIKPDPQLRNLLCSITQRKI---IFTN 111
G AD F P L + ++ I I +
Sbjct: 55 ESFSILTG-ITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIIST 113
Query: 112 SDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVAN 171
R ++ L+ D FD II ++ KP + + LA+
Sbjct: 114 KYRFRILSFLRNHMPDDWFDIIIG-------------GEDVTHH-KPDPEGLLLAIDRLK 159
Query: 172 VDPRHALFLDDNIKNVTAGKALGLRTVLV------GKTVNVGEADYALENVNNLPQVVPE 225
P L++ D+ + A G+ V + D + + L V +
Sbjct: 160 ACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPED 219
Query: 226 I 226
Sbjct: 220 K 220
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 4e-09
Identities = 39/232 (16%), Positives = 78/232 (33%), Gaps = 38/232 (16%)
Query: 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA- 62
+ L+FD+D TL S+ ++ ++ G + K +
Sbjct: 3 TYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPF-----SPAQAQKTFPMAAEQ 52
Query: 63 GLRALGYDIGADDYHGFVHGRLP-----YDLIKPDPQLRNLLCSITQRKI--IFTNSDRN 115
+ LG I A ++ F YD I+ P + +L + I T+ RN
Sbjct: 53 AMTELG--IAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRN 110
Query: 116 HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175
+ ++ I D+ P KP + AL NV P+
Sbjct: 111 ELESGMRSYPFMMRMAVTIS-------------ADDTPKR-KPDPLPLLTALEKVNVAPQ 156
Query: 176 HALFLDDNIKNVTAGKALGLRTVLV----GKTVNVGEADYALENVNNLPQVV 223
+ALF+ D++ + +A + L + + + + ++ ++
Sbjct: 157 NALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILELF 208
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-08
Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 55/224 (24%)
Query: 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST 60
L+ DL L + + I IE E F +
Sbjct: 24 KSKGIKNLLIDLGGVLINLDRERCIENFKKIGFQNIE--------------EKFCTHQLD 69
Query: 61 LAGLRALGYDIG---ADDYHGFVHGRLPYDL-------------IKPDPQLRNLLCSITQ 104
L+ + G ++ + + + + +LL + +
Sbjct: 70 GIFLQ---QEKGLITPAEFRDGIREMMGKMVSDKQIDAAWNSFLVDIPTYKLDLLLKLRE 126
Query: 105 RKIIF--TNSDRNH------AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156
+ +++ +N++ H + ++ D F++ LS + +
Sbjct: 127 KYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTY--------LSYEMK------MA 172
Query: 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200
KP + K A +DP+ F+DD+ N + LG+ T
Sbjct: 173 KPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTP 216
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 52.7 bits (126), Expect = 1e-08
Identities = 32/217 (14%), Positives = 59/217 (27%), Gaps = 63/217 (29%)
Query: 1 MDSPFNCLVFDLDDTLYPSE--TGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYG 58
M VFDLD TL+P T + ++ +G + ++ G V L+
Sbjct: 23 MARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQD--------VRLYPEVP 74
Query: 59 STLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAI 118
L L++LG S S+ A
Sbjct: 75 EVLKRLQSLGVPGA--------------------------AAS--------RTSEIEGAN 100
Query: 119 TCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAL 178
L+ ++ F + + + + +
Sbjct: 101 QLLELFDLFRYFVHREIYP-------------------GSKITHFERLQQKTGIPFSQMI 141
Query: 179 FLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALEN 215
F DD +N+ LG+ + + +N+ LE
Sbjct: 142 FFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLET 178
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 1e-08
Identities = 41/205 (20%), Positives = 59/205 (28%), Gaps = 31/205 (15%)
Query: 8 LVFDLDDTLYPSETGIAAAVKR---NIEGFLIEKCGFSETKASSLRVELFKAYGS----T 60
+VFD TL+ ++ A + E + S L Y T
Sbjct: 5 VVFDAYGTLFDVQSVADATERAYPGRGEYITQV--WRQKQLEYSWLRALMGRYADFWSVT 62
Query: 61 LAGLR----ALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI-IFTNSDRN 115
L LG + Y+ + P P L + K I +N +
Sbjct: 63 REALAYTLGTLGLEPDESFLADMAQA---YNRLTPYPDAAQCLAELAPLKRAILSNGAPD 119
Query: 116 HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175
+ + D FD +I D V KP D+ L V V P
Sbjct: 120 MLQALVANAGLTDSFDAVIS-------------VDAKRVF-KPHPDSYALVEEVLGVTPA 165
Query: 176 HALFLDDNIKNVTAGKALGLRTVLV 200
LF+ N +V K G V
Sbjct: 166 EVLFVSSNGFDVGGAKNFGFSVARV 190
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-08
Identities = 27/236 (11%), Positives = 63/236 (26%), Gaps = 39/236 (16%)
Query: 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRV------ELFKAYGST 60
++ D +TL + V + +++ G+ R +
Sbjct: 5 AVLVDFGNTLVGFKPVFYEKVYQ-----VLKDNGYDLDLRKVFRAYAKAMGMINYPDEDG 59
Query: 61 LAGLR------ALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTN 111
L + LG + L + + +N
Sbjct: 60 LEHVDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSN 119
Query: 112 SDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVAN 171
+ T L++ ++ FD + E + KP+ AL
Sbjct: 120 ASP-RVKTLLEKFDLKKYFDALALSY-------------EIKAV-KPNPKIFGFALAKVG 164
Query: 172 VDPRHALFLDDNIKN-VTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEI 226
A+ + D + K + +L+ + + ++N+ Q + E+
Sbjct: 165 YP---AVHVGDIYELDYIGAKRSYVDPILLDRYDFYPDVRDRVKNLREALQKIEEM 217
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 9e-08
Identities = 37/260 (14%), Positives = 75/260 (28%), Gaps = 64/260 (24%)
Query: 7 CLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLR--VELFKAYGSTL--- 61
L +D+ DTL + A G ++ + + ++A +
Sbjct: 3 LLTWDVKDTLLRLRHPLGEAYAT-----KARAHGLEVEPSALEQGFRQAYRAQSHSFPNY 57
Query: 62 -----------------AGLRALGY-------DIGADDYHGFVHGRLPYDLIKPDPQLRN 97
G I Y F H + +
Sbjct: 58 GLSHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHP----CTWQVLDGAED 113
Query: 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154
L R + + +N DR L L + + FD ++ +
Sbjct: 114 TLRECRTRGLRLAVISNFDRRLEGI-LGGLGLREHFDFVLT-------------SEAAGW 159
Query: 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKN-VTAGKALGLRTVLV-------GKTVNV 206
KP + AL +A+++P A + DN +A+G+ + LV +
Sbjct: 160 -PKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDS 218
Query: 207 GEADYALENVNNLPQVVPEI 226
++ L ++ +L + +
Sbjct: 219 VPKEHILPSLAHLLPALDCL 238
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 1e-07
Identities = 41/226 (18%), Positives = 74/226 (32%), Gaps = 42/226 (18%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIE-GFLIEKCG----FSETKASSLRVELFKAYGSTLA 62
L FD+ T+ + T I + +E +L+ G F E +LR
Sbjct: 4 LAFDIFGTVLDTSTVIQEFRNKQLEYTWLLTIMGKYVEFEEITKITLR----YI------ 53
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
L+ G + D+ Y+ K ++ +N N L+
Sbjct: 54 -LKVRGEESKFDEELNKWKNLKAYEDTKYLKEISE-----IAEVYALSNGSINEVKQHLE 107
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDD 182
R + F I A E+ KPS K L ++ + A +
Sbjct: 108 RNGLLRYFKGIFS----------AESVKEY----KPSPKVYKYFL--DSIGAKEAFLVSS 151
Query: 183 NIKNVTAGKALGLRTVLVGKTVNV-----GEADYALENVNNLPQVV 223
N +V K G+R++ V + + G+ D + + L + +
Sbjct: 152 NAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWI 197
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 2e-07
Identities = 34/250 (13%), Positives = 77/250 (30%), Gaps = 57/250 (22%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
+ F + FDLD TL S +A ++ ++ + + + T
Sbjct: 21 TQFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLVM---------TWI 66
Query: 63 G-------LRALGYDIGADDYHG-----------FVH--GRLPYDLIKPDPQLRNLLCSI 102
G RA+ + + F G ++ + P ++ L ++
Sbjct: 67 GNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEAL 126
Query: 103 TQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPS 159
+ + TN H L I F +++ P + KP
Sbjct: 127 KAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLG-------------GQSLPEI-KPH 172
Query: 160 MDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV------GKTVNVGEADYAL 213
+ P+ LF+ D+ ++ A + G V + + + D+
Sbjct: 173 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF 232
Query: 214 ENVNNLPQVV 223
++ ++ ++
Sbjct: 233 DDFADILKIT 242
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-07
Identities = 37/235 (15%), Positives = 76/235 (32%), Gaps = 29/235 (12%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRV------ELFKAYGSTL 61
++FD+D TL E+ + + + G + + S ++ E+ G
Sbjct: 7 VLFDIDGTLLKVESMNRRVLADALIEVYGTE-GSTGSHDFSGKMDGAIIYEVLSNVGLER 65
Query: 62 AGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIF----TNSDRNHA 117
A + +D + Y R + I +R LL +++ R + T +
Sbjct: 66 AEIADK-FDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASG 124
Query: 118 ITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHA 177
LK I F + L + P +++ + + AN P
Sbjct: 125 RHKLKLPGIDHYFPFGAFADD---ALDRNELPH-------IALERAR-RMTGANYSPSQI 173
Query: 178 LFLDDNIKNVTAGKALGLRTVLVGKTVNVGE------ADYALENVNNLPQVVPEI 226
+ + D ++ + L R++ V E +N +V+ I
Sbjct: 174 VIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASI 228
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 4e-07
Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 46/215 (21%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
L FD TL ETGI A++ L ++ G + T EL + +G + +
Sbjct: 9 LTFDCYGTLIDWETGIVNALQP-----LAKRTGKTFT-----SDELLEVFGRNESPQQTE 58
Query: 68 GYDIGADDYHGFVHGRLPYDL-IKPDPQLRNLLCSITQ-------------------RKI 107
D V+ R+ + ++PD R + + + +
Sbjct: 59 TPGALYQDILRAVYDRIAKEWGLEPDAAEREEFGTSVKNWPAFPDTVEALQYLKKHYKLV 118
Query: 108 IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL-A 166
I +N DRN +L + FD II + +P+ P+ + A
Sbjct: 119 ILSNIDRNEFKLSNAKLGVE--FDHIIT-----AQDVGSYKPN-------PNNFTYMIDA 164
Query: 167 LHVANVDPRHALFLDDNIKN-VTAGKALGLRTVLV 200
L A ++ + L +++ + GL + +
Sbjct: 165 LAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWI 199
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 8e-07
Identities = 36/240 (15%), Positives = 81/240 (33%), Gaps = 42/240 (17%)
Query: 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKAS-------SLRVEL 53
M + ++FDLD TL + GI +++ + + G E + L
Sbjct: 25 MKKNYEIVLFDLDGTLTDPKEGITKSIQ-----YSLNSFGIKEDLENLDQFIGPPLHDTF 79
Query: 54 FKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFT 110
+ Y + + + + G K ++ +L + + + T
Sbjct: 80 KEYYKFEDKKAKEA-VEKYREYFA--DKG---IFENKIYENMKEILEMLYKNGKILLVAT 133
Query: 111 NSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA 170
+ A T L+ +I F I + + ++ L +
Sbjct: 134 SKPTVFAETILRYFDIDRYFKYIAG-------------SNLDGT-RVNKNEVIQYVLDLC 179
Query: 171 NV-DPRHALFLDDNIKNVTAGKALGLRTVLV------GKTVNVGEADYALENVNNLPQVV 223
NV D + + D ++ K +G+ ++ V + ++ E Y +ENV ++ ++
Sbjct: 180 NVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 1e-06
Identities = 40/238 (16%), Positives = 81/238 (34%), Gaps = 44/238 (18%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYG--STLAGLR 65
++FDLD + + A K L E+ G + + + S L+
Sbjct: 5 VLFDLDGVITDTAEYHFRAWKA-----LAEEIGINGVDR-----QFNEQLKGVSREDSLQ 54
Query: 66 AL----GYDIGADDYHGFVHGRLPY--------DLIKPDPQLRNLLCSITQRKI---IFT 110
+ + A+++ + P + LL + KI + +
Sbjct: 55 KILDLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALAS 114
Query: 111 NSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVA 170
S + L+R+ + FD I KP+ D A H
Sbjct: 115 ASKNGPFL--LERMNLTGYFDAIADPAE-------VAAS-------KPAPDIFIAAAHAV 158
Query: 171 NVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNL-PQVVPEIW 227
V P ++ L+D+ + A K G + VG+ ++G+ + + ++ + + E+W
Sbjct: 159 GVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVW 216
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-06
Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 22/204 (10%)
Query: 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL 61
D+PF+ ++FDLD L SE IA + ++ + G + + L
Sbjct: 25 DAPFDAVLFDLDGVLVESEGIIAQVWQS-----VLAERGLHLDLTEIAMYFTGQRFDGVL 79
Query: 62 AGLRALGYDIGADDYHGFVHGRLPYDL--IKPDPQLRNLLCSITQRKI---IFTNSDRNH 116
A L + D+ + R + + L ++ + I +NS+R
Sbjct: 80 AYLAQQHDFVPPPDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGR 139
Query: 117 AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRH 176
L+ + + + I + R KP D A + P
Sbjct: 140 LHLKLRVAGLTELAGEHIYDPSWV-----GGRG-------KPHPDLYTFAAQQLGILPER 187
Query: 177 ALFLDDNIKNVTAGKALGLRTVLV 200
+ ++D++ AG A G +
Sbjct: 188 CVVIEDSVTGGAAGLAAGATLWGL 211
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 2e-06
Identities = 38/276 (13%), Positives = 69/276 (25%), Gaps = 67/276 (24%)
Query: 1 MD-SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRV-------- 51
MD ++F T V I K G + T + +
Sbjct: 1 MDRMKIEAVIFAWAGTTVDYGCFAPLEVFMEI----FHKRGVAITAEEARKPMGLLKIDH 56
Query: 52 --ELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPY------DLIKPDPQLRNLLCSIT 103
L + R D P ++ ++ S+
Sbjct: 57 VRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLR 116
Query: 104 QRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFPVLLKPS 159
+R I T R K + D ++ + + RP P
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA-----GRPY-------PW 164
Query: 160 MDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGE----------- 208
M K A+ + H + + D + ++ G+ G+ TV V +
Sbjct: 165 M-CYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDS 223
Query: 209 ------------------ADYALENVNNLPQVVPEI 226
A + +E + L V+ I
Sbjct: 224 VELREKIEVVRNRFVENGAHFTIETMQELESVMEHI 259
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-06
Identities = 28/203 (13%), Positives = 66/203 (32%), Gaps = 35/203 (17%)
Query: 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG 63
++ ++DL TL + AA + G ++ +++A +
Sbjct: 5 KYHDYIWDLGGTLLDNYETSTAAFVE-----TLALYGITQDHD-----SVYQALKVSTPF 54
Query: 64 L--RAL-GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHA 117
+ + Y + + + +LL I+ + + ++ +
Sbjct: 55 AIETFAPNLENFLEKYK--ENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRND-QV 111
Query: 118 ITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHA 177
+ L++ IA F +++ KP+ ++M +
Sbjct: 112 LEILEKTSIAAYFTEVVT-------------SSSGFK-RKPNPESMLYLREKYQISS--G 155
Query: 178 LFLDDNIKNVTAGKALGLRTVLV 200
L + D ++ AG+A GL T L
Sbjct: 156 LVIGDRPIDIEAGQAAGLDTHLF 178
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-06
Identities = 45/227 (19%), Positives = 72/227 (31%), Gaps = 39/227 (17%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
S VFD+D TL + AA R ++ + A
Sbjct: 4 SEIKHWVFDMDGTLTIAVHDFAAI--REALSI-------------PAEDDILTHLAALPA 48
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAIT 119
A + + H R +P P L+ + R I T + R A
Sbjct: 49 DESAAKHAWLLE------HERDLAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHV 102
Query: 120 CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALF 179
L+ + +ADCF + R + P KP + +V P +
Sbjct: 103 TLEAIGLADCFAEADV----------LGRDEAPP---KPHPGGLLKLAEAWDVSPSRMVM 149
Query: 180 LDDNIKNVTAGKALGLRTVLVGKTVNVGE--ADYALENVNNLPQVVP 224
+ D ++ G+A G RTVLV N D+ + L ++
Sbjct: 150 VGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLRDLLS 196
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 3e-06
Identities = 32/229 (13%), Positives = 72/229 (31%), Gaps = 38/229 (16%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLR-------VELFKAY 57
++DLD TL S I + ++ + K +L
Sbjct: 4 KTAFIWDLDGTLLDSYEAILSGIEE-----TFAQFSIPYDKEKVREFIFKYSVQDLLVRV 58
Query: 58 GSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDR 114
+ + + P R +L + I I+T+
Sbjct: 59 AEDRNLDVEV-----LNQVRAQ-SLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGN 112
Query: 115 NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174
+A T LK L + F +I+ V KPS +A L ++
Sbjct: 113 -NAFTILKDLGVESYFTEILT-------------SQSGFVR-KPSPEAATYLLDKYQLNS 157
Query: 175 RHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVV 223
+ ++ D +V + G++++ + E ++ ++ + ++ ++
Sbjct: 158 DNTYYIGDRTLDVEFAQNSGIQSINF--LESTYEGNHRIQALADISRIF 204
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 4e-06
Identities = 38/216 (17%), Positives = 64/216 (29%), Gaps = 55/216 (25%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLR-------VELFK 55
+ + FDLD TL S GI A ++ G A ++R F
Sbjct: 2 TSITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKTIRGFMGPPLESSFA 56
Query: 56 AYGSTLAGLRALG---YDIGADDY------HGFVHGRLPYDLIKPDPQLRNLLCSITQRK 106
L Y G + + I LL ++
Sbjct: 57 ---------TCLSKDQISEAVQIYRSYYKAKGIYEAQ-LFPQIID------LLEELSSSY 100
Query: 107 IIF--TNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164
++ T D + A K LEI FD I P+ K + +
Sbjct: 101 PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPH--------------KADV--IH 144
Query: 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200
AL + P A+ + D ++ + G++ + +
Sbjct: 145 QALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAI 180
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 5e-06
Identities = 23/156 (14%), Positives = 45/156 (28%), Gaps = 26/156 (16%)
Query: 52 ELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---I 108
+ G TL + YD D Y + + L + Q I
Sbjct: 5 HVIWDMGETLNTVPNTRYDHHPLDT---------YPEVVLRKNAKETLEKVKQLGFKQAI 55
Query: 109 FTNSDRNHA---ITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165
+N+ + L I D FD I + + + KP
Sbjct: 56 LSNTATSDTEVIKRVLTNFGIIDYFDFIYA----------SNSELQPGKMEKPDKTIFDF 105
Query: 166 ALHVANVDPRHALFLDDNIKN-VTAGKALGLRTVLV 200
L+ +D A+ + + ++ + G+ + +
Sbjct: 106 TLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWL 141
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 5e-06
Identities = 30/221 (13%), Positives = 63/221 (28%), Gaps = 38/221 (17%)
Query: 1 MDSPFNCLVFDLDDTLYPS---ETGIAAAVKRNIEGFLIEKCGFSETKA--SSLRVELFK 55
M ++ + D++ T+ P + + + + + S S ++ +
Sbjct: 27 MGDNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKE 86
Query: 56 AYGSTLAGLRALGYDIGADDY-------HGFVHGRLPYDLIKPD--PQLRNLL------- 99
+ + L A HG+ G++ + D ++
Sbjct: 87 QLQAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAP-VYADAIDFIKRKKRVFIYSS 145
Query: 100 CSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPS 159
S+ +K++F +A L++ D T K
Sbjct: 146 GSVKAQKLLFGYVQDPNA-PAHDSLDLNSYIDGYFDINTSGK---------------KTE 189
Query: 160 MDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200
+ L LFL DN + A +G+ T L
Sbjct: 190 TQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLA 230
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 6e-06
Identities = 41/238 (17%), Positives = 80/238 (33%), Gaps = 31/238 (13%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
S F+ ++FD D L SE A R L+ + G+ + + + L
Sbjct: 2 SGFDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEEMGERFAGMTWKNILL 56
Query: 63 GLRA-LGYDIGAD---DYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAI 118
+ + + A + RL D+ K ++ L +T + I +NS +
Sbjct: 57 QVESEASIPLSASLLDKSEKLLDMRLERDV-KIIDGVKFALSRLTTPRCICSNSSSHRLD 115
Query: 119 TCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHAL 178
L ++ + F I A R KP D V P +
Sbjct: 116 MMLTKVGLKPYFAPHIYSAKDLG----ADRV-------KPKPDIFLHGAAQFGVSPDRVV 164
Query: 179 FLDDNIKNVTAGKALGLRTVLV----------GKTVNVGEADYALENVNNLPQVVPEI 226
++D++ + +A G+R + + A+ + + +LP V+ +
Sbjct: 165 VVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAM 222
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 7e-06
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Query: 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENV 216
K ++ + + LFL D + +A + + +V V G A +
Sbjct: 187 KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVV---VRPGNAGLTDDEK 243
Query: 217 NNLPQV 222
+
Sbjct: 244 TYYSLI 249
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 9e-06
Identities = 39/260 (15%), Positives = 82/260 (31%), Gaps = 61/260 (23%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL 64
F+C D+ D + K I+ ++ K + + +
Sbjct: 33 FDC--KDVQDMPKSILS------KEEIDHIIMSK---DAVSGTLRLFWTLLSKQEEMVQ- 80
Query: 65 RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSD--RNHAITCLK 122
+ + ++ +Y F+ + + +P R I QR ++ ++ + ++
Sbjct: 81 KFVE-EVLRINY-KFLMSPIKTEQRQPSMMTRMY---IEQRDRLYNDNQVFAKYNVS--- 132
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK------LALHVANVDPRH 176
RL+ + + L + RP + ++ D + +AL V
Sbjct: 133 RLQ---------PYLKLRQALLEL-RPAKNVLI-----DGVLGSGKTWVALDVCLSYKVQ 177
Query: 177 ALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQSDDGD- 235
D I + N + LE + L + W S+SD
Sbjct: 178 CKM-DFKIFWLNLK--------------NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222
Query: 236 --QRISRTRSELESILTTTP 253
RI ++EL +L + P
Sbjct: 223 IKLRIHSIQAELRRLLKSKP 242
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 13/122 (10%), Positives = 34/122 (27%), Gaps = 21/122 (17%)
Query: 108 IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLAL 167
+ +N ++ L FD + KP+ D +
Sbjct: 131 VVSNKPNEAVQVLVEEL-FPGSFDFALG-------------EKSGIRR-KPAPDMTSECV 175
Query: 168 HVANVDPRHALFLDDNIKNVTAGKALGLRTVLV------GKTVNVGEADYALENVNNLPQ 221
V V +++ D+ ++ + + + V + A ++ L +
Sbjct: 176 KVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235
Query: 222 VV 223
+
Sbjct: 236 AI 237
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 2e-05
Identities = 38/261 (14%), Positives = 61/261 (23%), Gaps = 41/261 (15%)
Query: 3 SPFNCLVFDLD----DT--LYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKA 56
P L+ D D L P + + IE E T+ S +
Sbjct: 12 GPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGN 71
Query: 57 YGSTLAGLRALGYDIGADDYHGFVHGRLPYDL------IKPDPQLRNLLCSITQRKI--- 107
A L G +D P + P + + + + I
Sbjct: 72 SRIANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVG 131
Query: 108 IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166
T L + + + RP L
Sbjct: 132 GNTGYGPGMMAPALIAAKEQGYTPASTVFATDV-----VRGRPFPDMALK-----VAL-E 180
Query: 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEI 226
L V + +DD + + G G+ TV V + N E E+ L
Sbjct: 181 LEVG--HVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGN--EVGLDREDWQALSS----- 231
Query: 227 WVSQSDDGDQRISRTRSELES 247
D+ L +
Sbjct: 232 -----DEQQSYRQHAEQRLFN 247
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 9e-05
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 19/134 (14%)
Query: 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK 145
P + LLC + I + ++S I L+RL I D F I+ T
Sbjct: 91 EDLLPGIGRLLCQLKNENIKIGLASSSRNAPKI--LRRLAIIDDFHAIVDPTT------- 141
Query: 146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN 205
+ KP D A + +V P ++D ++A K+ G+ V VG+
Sbjct: 142 LAKG-------KPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQP 194
Query: 206 VGEADYALENVNNL 219
+ AD + ++L
Sbjct: 195 MLGADLVVRQTSDL 208
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 1e-04
Identities = 25/137 (18%), Positives = 52/137 (37%), Gaps = 17/137 (12%)
Query: 93 PQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149
P + +L + + + + ++S + L+ + FD ++
Sbjct: 92 PDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLS-------------G 138
Query: 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEA 209
+EF KP+ + AL NV AL ++D+ K + AG A + + +
Sbjct: 139 EEFK-ESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQ 197
Query: 210 DYALENVNNLPQVVPEI 226
A +++L V+ I
Sbjct: 198 SAAKGLLDSLTDVLDLI 214
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 1e-04
Identities = 40/236 (16%), Positives = 73/236 (30%), Gaps = 32/236 (13%)
Query: 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG 63
P L+FD+D L +E + + + + + V KA +
Sbjct: 29 PVTHLIFDMDGLLLDTERLYSVVFQE-----ICNRYDKKYSWDVKSLVMGKKALEAAQII 83
Query: 64 LRALGYDIGADDYHGFVHGRLP--YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAI 118
+ L + ++ +L + P L+ + + I + T+S
Sbjct: 84 IDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFD 143
Query: 119 TCLKRL-EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP--R 175
R E F I+ + +P + KP D + P
Sbjct: 144 MKTSRHKEFFSLFSHIVLGD--DPEVQHG----------KPDPDIFLACAKRFSPPPAME 191
Query: 176 HALFLDDNIKNVTAGKALGLRTVLVG----KTVNVGEADYALENVNNLPQVVPEIW 227
L +D V A A G++ V+V +A L N+L PE++
Sbjct: 192 KCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVL---NSLQDFQPELF 244
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 2e-04
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 31/148 (20%)
Query: 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMN---PN 142
P +R + ++ + + + S + L ++ D FD + E + P+
Sbjct: 93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPH 152
Query: 143 LSKATRPDEFPVLLKPSMDAMKLALHVA---NVDPRHALFLDDNIKNVTAGKALGLRTVL 199
P + L A VDP + L+D++ + A KA +R+++
Sbjct: 153 ------PQVY--------------LDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIV 192
Query: 200 VGKTVNVGEADYALEN--VNNLPQVVPE 225
V + + L N +++L ++ +
Sbjct: 193 VPAPEAQNDPRFVLANVKLSSLTELTAK 220
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 3e-04
Identities = 40/233 (17%), Positives = 75/233 (32%), Gaps = 38/233 (16%)
Query: 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLR--------VE 52
M ++FDLD + + A ++ I SL+
Sbjct: 1 MVMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGIS---IDAQFNESLKGISRDESLRR 57
Query: 53 LFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IF 109
+ + G + +VH + P +R+LL + ++I +
Sbjct: 58 ILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLA 117
Query: 110 TNSDRNHAITCLKRLEIADCFDQIICFETMN---PNLSKATRPDEFPVLLKPSMDAMKLA 166
+ S I L LE+ + F + P+ P+ F L A
Sbjct: 118 SVSLNAPTI--LAALELREFFTFCADASQLKNSKPD------PEIF---LA--------A 158
Query: 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNL 219
V P+ + ++D + A A G+R+V +G + A L + +L
Sbjct: 159 CAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAG--LTGAQLLLPSTESL 209
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 3e-04
Identities = 38/253 (15%), Positives = 83/253 (32%), Gaps = 36/253 (14%)
Query: 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYG-- 58
+ N +FD+D T+ S+ IAA + + + + + +
Sbjct: 31 LSLKINAALFDVDGTIIISQPAIAAFWRD-----FGKDKPYFDAE------HVIHISHGW 79
Query: 59 STLAGLRALGYDIGADDYHGFVHGRLPY---DLIKPDPQLRNLLCSITQRKI----IFTN 111
T + D ++Y + G +P + P L ++ + T+
Sbjct: 80 RTYDAIAKFAPDFADEEYVNKLEGEIPEKYGEHSIEVPGAVKLCNALNALPKEKWAVATS 139
Query: 112 SDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVAN 171
R+ A L+I + I + K +P P L + + ++ +
Sbjct: 140 GTRDMAKKWFDILKI-KRPEYFITANDV-----KQGKPHPEPYLK--GRNGLGFPINEQD 191
Query: 172 VDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGE-----ADYALENVNNLPQVVPEI 226
+ +D + AGKA G + V + T ++ D V N +
Sbjct: 192 PSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDII---VKNHESIRVGE 248
Query: 227 WVSQSDDGDQRIS 239
+ +++D+ +
Sbjct: 249 YNAETDEVELIFD 261
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 39.1 bits (91), Expect = 9e-04
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALE 214
++KP K L P +FLDD N+ + LG+ T+LV + A LE
Sbjct: 158 MVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV---QDTDTALKELE 214
Query: 215 NVNNLP 220
V +
Sbjct: 215 KVTGIQ 220
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 256 | |||
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.97 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.97 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.97 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.97 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.97 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.97 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.97 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.97 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.96 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.96 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.96 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.96 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.96 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.96 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.96 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.96 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.96 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.96 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.96 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.96 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.96 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.96 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.96 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.96 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.96 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.96 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.96 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.96 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.95 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.95 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.95 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.95 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.95 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.95 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.95 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.95 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.95 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.95 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.95 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.95 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.95 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.95 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.95 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.94 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.94 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.94 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.94 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.94 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.94 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.93 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.93 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.93 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.93 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.92 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.92 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.92 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.92 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.92 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.91 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.91 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.91 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.9 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.9 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.9 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.89 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.89 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.88 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.88 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.87 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.87 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.87 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.86 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.86 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.85 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.85 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.85 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.85 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.84 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.83 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.83 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.83 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.82 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.81 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.81 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.81 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.8 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.8 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.8 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.8 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.79 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.78 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.77 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.77 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.77 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.77 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.77 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.76 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.76 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.76 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.76 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.75 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.75 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.74 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.72 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.72 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.71 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.71 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.71 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.71 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.69 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.69 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.68 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.49 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.65 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.63 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.63 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.62 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.61 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.59 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.58 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.58 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.56 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.54 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.52 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.49 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.43 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.42 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.41 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.4 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.37 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.31 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.3 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.27 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.24 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.21 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.11 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.06 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 99.0 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.92 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.87 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.62 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.62 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.46 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 98.39 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.23 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.19 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.11 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.03 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.01 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.98 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.93 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.81 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.73 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.72 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.6 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.57 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.19 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.12 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.88 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 96.81 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 96.7 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 96.7 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.64 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.38 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.16 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.77 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 94.84 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 94.75 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 93.2 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 91.04 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 88.65 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 88.36 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 81.18 |
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=210.49 Aligned_cols=198 Identities=23% Similarity=0.339 Sum_probs=148.9
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh-----HHHHHHcCCCCChhhHhhh
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-----LAGLRALGYDIGADDYHGF 79 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 79 (256)
+|+|+||+||||+|+.+.+..++.+ +++.+|.+...... ....|.. .............+.+...
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRR-----VAESYGKPYTEDLH-----RRIMGVPEREGLPILMEALEIKDSLENFKKR 70 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHH-----HHHHTTCCCCHHHH-----HHHTTSCHHHHHHHHHHHTTCCSCHHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHhccchhhhhhhhhhcccchhhHHHHHHH
Confidence 5899999999999999988888887 56677776433211 1111111 1122233333344433332
Q ss_pred hhcCC---CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCC
Q 025190 80 VHGRL---PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP 153 (256)
Q Consensus 80 ~~~~~---~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (256)
+.+.. ......++||+.++++.|+++|+ ++||+....+...++.+|+.++||.++++++++.
T Consensus 71 ~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~------------ 138 (216)
T 3kbb_A 71 VHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKN------------ 138 (216)
T ss_dssp HHHHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSS------------
T ss_pred HHHHHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCC------------
Confidence 22111 12346789999999999999986 9999999999999999999999999999999886
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEE-EcCCCCC------CCCCeeeCCcCchHHhHHHH
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVL-VGKTVNV------GEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~-v~~~~~~------~~~~~~~~~~~el~~~l~~~ 226 (256)
+||+|++|..+++++|++|++|++|||+.+|+.+|+++||++|+ +.++... ..++.+ .++.++.+.|+++
T Consensus 139 --~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i-~~~~eli~~l~eL 215 (216)
T 3kbb_A 139 --GKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVAL-VKPEEILNVLKEV 215 (216)
T ss_dssp --CTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEE-ECGGGHHHHHHHH
T ss_pred --CcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEE-CCHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999986 6555432 334444 4678888888776
Q ss_pred H
Q 025190 227 W 227 (256)
Q Consensus 227 ~ 227 (256)
+
T Consensus 216 L 216 (216)
T 3kbb_A 216 L 216 (216)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=215.74 Aligned_cols=201 Identities=20% Similarity=0.253 Sum_probs=146.7
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh-----HHHHHHcC--CCCChhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-----LAGLRALG--YDIGADD 75 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~ 75 (256)
.|+|+|+||+||||+|+.+.+..+|.+ +++++|++....... . ..|.. ........ .......
T Consensus 24 ~MIKaViFDlDGTLvDs~~~~~~a~~~-----~~~~~g~~~~~~~~~---~--~~g~~~~~~~~~~~~~~~~~~~~~~~~ 93 (250)
T 4gib_A 24 AMIEAFIFDLDGVITDTAYYHYMAWRK-----LAHKVGIDIDTKFNE---S--LKGISRMESLDRILEFGNKKYSFSEEE 93 (250)
T ss_dssp CCCCEEEECTBTTTBCCHHHHHHHHHH-----HHHTTTCCCCTTGGG---G--TTTCCHHHHHHHHHHHTTCTTTSCHHH
T ss_pred chhheeeecCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHH---H--HhCcchHHHHHHhhhhhcCCCCCCHHH
Confidence 468999999999999998888888887 556667653221000 0 00100 00111111 1111111
Q ss_pred -------HhhhhhcCC-CCCCCCCChhHHHHHHhhhcCcE-EEecCChHHHHHHHHhcCcccccceeEecccCCcccccC
Q 025190 76 -------YHGFVHGRL-PYDLIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA 146 (256)
Q Consensus 76 -------~~~~~~~~~-~~~~~~~~pg~~~~l~~l~~~~~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~ 146 (256)
....+.... ......++||+.++++.|+++|+ +++++....+...++++|+.++|+.++++++++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~~~~~L~~~gl~~~Fd~i~~~~~~~~----- 168 (250)
T 4gib_A 94 KVRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKNAINVLNHLGISDKFDFIADAGKCKN----- 168 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTTHHHHHHHHTCGGGCSEECCGGGCCS-----
T ss_pred HHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhcccccccccccchhhhHhhhcccccccceeecccccCC-----
Confidence 111111111 12345689999999999999998 5555555567788999999999999999999886
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCch-HHhHHH
Q 025190 147 TRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNL-PQVVPE 225 (256)
Q Consensus 147 ~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el-~~~l~~ 225 (256)
+||+|+.|..+++++|++|++|++|||+.+|+++|+++|+.+|++++......||++++++.|| .+.|.+
T Consensus 169 ---------~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ad~vi~~l~eL~~~~i~~ 239 (250)
T 4gib_A 169 ---------NKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENLKKANLVVDSTNQLKFEYIQE 239 (250)
T ss_dssp ---------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTTTTSSEEESSGGGCCHHHHHH
T ss_pred ---------CCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHhccCCEEECChHhCCHHHHHH
Confidence 7999999999999999999999999999999999999999999998877777899999999998 466665
Q ss_pred HH
Q 025190 226 IW 227 (256)
Q Consensus 226 ~~ 227 (256)
.+
T Consensus 240 ~~ 241 (250)
T 4gib_A 240 KY 241 (250)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=201.30 Aligned_cols=203 Identities=19% Similarity=0.272 Sum_probs=156.0
Q ss_pred CCCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHH-----HHHHHh--h----------hhHHH
Q 025190 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRV-----ELFKAY--G----------STLAG 63 (256)
Q Consensus 1 m~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~----------~~~~~ 63 (256)
|||++|+|+||+||||+|+...+..++.+ +.+++|.+......... .....+ + .....
T Consensus 3 ~mm~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (238)
T 3ed5_A 3 AMKRYRTLLFDVDDTILDFQAAEALALRL-----LFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSAL 77 (238)
T ss_dssp -CCCCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred ccccCCEEEEcCcCcCcCCchhHHHHHHH-----HHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 67789999999999999998887777776 44556765432211100 011100 0 00122
Q ss_pred HHHcCCCCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCC
Q 025190 64 LRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMN 140 (256)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~ 140 (256)
+...+.......+...+.+.. .....++||+.++|+.|++. + ++||+....++..++.+|+..+|+.++++++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~ 155 (238)
T 3ed5_A 78 LKEYGYEADGALLEQKYRRFL-EEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTG 155 (238)
T ss_dssp HHHTTCCCCHHHHHHHHHHHH-TTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTT
T ss_pred HHHcCCCCcHHHHHHHHHHHH-HhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccC
Confidence 334455555555555544432 24578999999999999987 5 899999999999999999999999999999887
Q ss_pred cccccCCCCCCCCCCCCCCHHHHHHHHHHcC-CCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC----CCCCCCeeeC
Q 025190 141 PNLSKATRPDEFPVLLKPSMDAMKLALHVAN-VDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV----NVGEADYALE 214 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~----~~~~~~~~~~ 214 (256)
. +||+|.++..+++++| ++++++++|||+. +|+.+|+.+|+++++++++. ....|++++.
T Consensus 156 ~--------------~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~ 221 (238)
T 3ed5_A 156 F--------------QKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR 221 (238)
T ss_dssp S--------------CTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES
T ss_pred C--------------CCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC
Confidence 6 8999999999999999 9999999999998 99999999999999998753 3457999999
Q ss_pred CcCchHHhHH
Q 025190 215 NVNNLPQVVP 224 (256)
Q Consensus 215 ~~~el~~~l~ 224 (256)
++.+|.++|.
T Consensus 222 ~~~el~~~l~ 231 (238)
T 3ed5_A 222 KLEELYHILN 231 (238)
T ss_dssp SGGGHHHHHT
T ss_pred CHHHHHHHHH
Confidence 9999988774
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=215.51 Aligned_cols=193 Identities=20% Similarity=0.217 Sum_probs=135.4
Q ss_pred CCCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh-----HHHHHHcCCC--CCh
Q 025190 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-----LAGLRALGYD--IGA 73 (256)
Q Consensus 1 m~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~ 73 (256)
|+|++|+|+||+||||+|+...+..++.+ +++++|++...... ....|.. ...+...+.. ...
T Consensus 1 M~MkiKaViFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~ 70 (243)
T 4g9b_A 1 MVMKLQGVIFDLDGVITDTAHLHFQAWQQ-----IAAEIGISIDAQFN-----ESLKGISRDESLRRILQHGGKEGDFNS 70 (243)
T ss_dssp -CCCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCTTGG-----GGGTTCCHHHHHHHHHHHTTCGGGCCH
T ss_pred CCccCcEEEEcCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHcCCCHHHHHHHHHHHhhcccchhH
Confidence 88999999999999999998888888887 55566664321100 0001110 0111111111 111
Q ss_pred hhHhh-------hhhcCC-CCCCCCCChhHHHHHHhhhcCcE-EEecCChHHHHHHHHhcCcccccceeEecccCCcccc
Q 025190 74 DDYHG-------FVHGRL-PYDLIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLS 144 (256)
Q Consensus 74 ~~~~~-------~~~~~~-~~~~~~~~pg~~~~l~~l~~~~~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~ 144 (256)
..... .+...+ ......++||+.++++.|+++|+ +++.+........++.+|+.++|+.++++++++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~~~~~l~~~gl~~~fd~i~~~~~~~~--- 147 (243)
T 4g9b_A 71 QERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKN--- 147 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTTHHHHHHHTTCGGGCSEECCGGGCSS---
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccchhhhhhhhhhccccccccccccccC---
Confidence 11100 000000 12334689999999999999997 3333333456778999999999999999999886
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCch
Q 025190 145 KATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNL 219 (256)
Q Consensus 145 ~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el 219 (256)
+||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.+|+|+++.. .++..+++..++
T Consensus 148 -----------~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~--~ad~~~~~~~~l 209 (243)
T 4g9b_A 148 -----------SKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLT--GAQLLLPSTESL 209 (243)
T ss_dssp -----------CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCC--SCSEEESSGGGC
T ss_pred -----------CCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCC--cHHHhcCChhhc
Confidence 89999999999999999999999999999999999999999999988754 356666666553
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-29 Score=205.05 Aligned_cols=214 Identities=30% Similarity=0.514 Sum_probs=171.9
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhc
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHG 82 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (256)
.++|+|+||+||||+++...+..+...++.+++....+++..........++..++.....+.. ......+.+...+..
T Consensus 55 ~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~ 133 (282)
T 3nuq_A 55 PNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVM-FHKVNALEYNRLVDD 133 (282)
T ss_dssp CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHH-TTSSCHHHHHHHHTT
T ss_pred CCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHH-HcCCCHHHHHHHHhh
Confidence 4679999999999999998888888888888777778888777766666666666655544432 234466677666655
Q ss_pred CCC-CCCCCCChhHHHHHHhhhcCcE-----EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCC
Q 025190 83 RLP-YDLIKPDPQLRNLLCSITQRKI-----IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 83 ~~~-~~~~~~~pg~~~~l~~l~~~~~-----ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
... .....++||+.++|+.|+++|+ ++||+....++..++.+|+..+|+.+++++..+. ....+
T Consensus 134 ~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~----------~~~~~ 203 (282)
T 3nuq_A 134 SLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRT----------DTLVC 203 (282)
T ss_dssp TSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSC----------SSCCC
T ss_pred hhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCC----------cccCC
Confidence 432 3457899999999999998764 9999999999999999999999999998776542 12347
Q ss_pred CCCHHHHHHHHHHcCCCC-CcEEEEcCCccccHHHHHcCC-eEEEEcCCCC------CCCCCeeeCCcCchHHhHHHHH
Q 025190 157 KPSMDAMKLALHVANVDP-RHALFLDDNIKNVTAGKALGL-RTVLVGKTVN------VGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~-~~~i~vGDs~~Di~~a~~~G~-~~v~v~~~~~------~~~~~~~~~~~~el~~~l~~~~ 227 (256)
||++.+|..+++++|+++ ++|++|||+.+|+.+|+.+|+ .++++..+.. ...+++++.++.+|.++|+++|
T Consensus 204 Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~~lf 282 (282)
T 3nuq_A 204 KPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF 282 (282)
T ss_dssp TTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGTSGGGC
T ss_pred CcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHHhhhhC
Confidence 999999999999999998 999999999999999999999 5566665532 3578999999999999887653
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=206.84 Aligned_cols=201 Identities=18% Similarity=0.283 Sum_probs=153.8
Q ss_pred CCCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh-----HHHH-HHcCCCCChh
Q 025190 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-----LAGL-RALGYDIGAD 74 (256)
Q Consensus 1 m~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~ 74 (256)
||+++|+|+||+||||+|+...+..++.+ +.+.+|........ ....+.. ...+ ..++...+.+
T Consensus 20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (243)
T 3qxg_A 20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQ-----VMKTHGLDLSREEA-----YMHEGRTGASTINIVFQRELGKEATQE 89 (243)
T ss_dssp --CCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHH-----HHTTTSCHHHHHHHHHHHHHSSCCCHH
T ss_pred ccccCCEEEEcCCCCCCCCHHHHHHHHHH-----HHHHhCCCCCHHHH-----HHHhCCCHHHHHHHHHHHHhCCCCCHH
Confidence 56789999999999999999888778777 44556765433221 1111111 1111 1234444544
Q ss_pred hHhhhhhc---CC-CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc--ceeEecccCCccccc
Q 025190 75 DYHGFVHG---RL-PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSK 145 (256)
Q Consensus 75 ~~~~~~~~---~~-~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~ 145 (256)
.+...+.. .+ ......++||+.++|+.|+++|+ ++||+....+...++. ++..+| +.++++++...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~---- 164 (243)
T 3qxg_A 90 EIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKY---- 164 (243)
T ss_dssp HHHHHHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSS----
T ss_pred HHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCC----
Confidence 44332211 00 12457899999999999999986 8999998889889999 999999 88999988776
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC------CCCCeeeCCcCch
Q 025190 146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV------GEADYALENVNNL 219 (256)
Q Consensus 146 ~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~------~~~~~~~~~~~el 219 (256)
+||+|..|..+++++|++|++|++|||+.+|+.+|+.+|+.++++.++... ..|+++++++.||
T Consensus 165 ----------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el 234 (243)
T 3qxg_A 165 ----------GKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL 234 (243)
T ss_dssp ----------CTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHH
T ss_pred ----------CCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHH
Confidence 899999999999999999999999999999999999999999999876532 4699999999999
Q ss_pred HHhHHHH
Q 025190 220 PQVVPEI 226 (256)
Q Consensus 220 ~~~l~~~ 226 (256)
.++|..+
T Consensus 235 ~~~l~~l 241 (243)
T 3qxg_A 235 CDSWDTI 241 (243)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998775
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=203.47 Aligned_cols=194 Identities=20% Similarity=0.247 Sum_probs=143.1
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-HHHHcCCCC-ChhhHhhhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDI-GADDYHGFV 80 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~ 80 (256)
|++|+|+||+||||+|+...+..++.+ +.+.+|.+....... ....|.... .+... ... ..+.+...+
T Consensus 2 M~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~-~~~~~~~~~~~~~ 71 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKTI----RGFMGPPLESSFATC-LSKDQISEAVQIY 71 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHH-----HHHHHTCCCCCHHHH----HHTSSSCHHHHHHTT-SCGGGHHHHHHHH
T ss_pred CCCCEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHcCccHHHHHHHH-cCHHHHHHHHHHH
Confidence 468999999999999998887777776 445566643222111 112232221 22222 111 111222222
Q ss_pred hcCC---CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 81 HGRL---PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 81 ~~~~---~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
.+.+ ......++||+.++|+.|++ |+ ++||+....++..++++|+..+|+.+++++ +.
T Consensus 72 ~~~~~~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~------------- 135 (210)
T 2ah5_A 72 RSYYKAKGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PE------------- 135 (210)
T ss_dssp HHHHHHTGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SS-------------
T ss_pred HHHHHHhccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CC-------------
Confidence 1111 12345789999999999998 76 999999999999999999999999999887 43
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHHhH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQVV 223 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~~l 223 (256)
.||+|+.|..+++++|++|++|++|||+.+|+++|+++|+.++++.++.. ...++++++++.+|.++|
T Consensus 136 -~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~l 209 (210)
T 2ah5_A 136 -APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp -CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred -CCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence 79999999999999999999999999999999999999999999986642 246899999999987654
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-30 Score=204.24 Aligned_cols=202 Identities=17% Similarity=0.276 Sum_probs=152.9
Q ss_pred CCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh-----HHHH-HHcCCCCChhh
Q 025190 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-----LAGL-RALGYDIGADD 75 (256)
Q Consensus 2 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~ 75 (256)
|+++|+|+||+||||+++...+..++.+ +.+.+|.+...... ....|.. ...+ ...+...+.+.
T Consensus 20 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 89 (247)
T 3dv9_A 20 SIDLKAVLFDMDGVLFDSMPNHAESWHK-----IMKRFGFGLSREEA-----YMHEGRTGASTINIVSRRERGHDATEEE 89 (247)
T ss_dssp CCCCCEEEEESBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHH-----HHTTTSCHHHHHHHHHHHHHSSCCCHHH
T ss_pred CCCCCEEEECCCCccCcCHHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHhCCChHHHHHHHHHHhcCCCCCHHH
Confidence 3578999999999999998888777777 44556765433221 1111111 1111 12344445544
Q ss_pred Hhhhhhc---CC-CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc--ceeEecccCCcccccC
Q 025190 76 YHGFVHG---RL-PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKA 146 (256)
Q Consensus 76 ~~~~~~~---~~-~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~ 146 (256)
+...+.. .+ ......++||+.++++.|+++|+ ++||+....+...++. |+.++| +.++++++.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~----- 163 (247)
T 3dv9_A 90 IKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKY----- 163 (247)
T ss_dssp HHHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSS-----
T ss_pred HHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCC-----
Confidence 4332211 11 12457899999999999999986 8999998889999999 999999 88999988776
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchH
Q 025190 147 TRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLP 220 (256)
Q Consensus 147 ~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~ 220 (256)
+||+|.++..+++++|+++++|++|||+.+|+.+|+.+|+.++++.++.. ...|+++++++.+|.
T Consensus 164 ---------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~ 234 (247)
T 3dv9_A 164 ---------GKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFN 234 (247)
T ss_dssp ---------CTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHH
T ss_pred ---------CCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHH
Confidence 89999999999999999999999999999999999999999999987643 247999999999999
Q ss_pred HhHHHHHh
Q 025190 221 QVVPEIWV 228 (256)
Q Consensus 221 ~~l~~~~~ 228 (256)
++|..++.
T Consensus 235 ~~l~~~~~ 242 (247)
T 3dv9_A 235 KNWETLQS 242 (247)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-30 Score=200.43 Aligned_cols=197 Identities=16% Similarity=0.185 Sum_probs=148.4
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhh-----hHHHHHHcCCCCChhhHh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS-----TLAGLRALGYDIGADDYH 77 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 77 (256)
+|+|+|+||+||||+++...+..++.+ ..+.+|.+...... ....|. ........+.......+.
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKYYYDRRAS-----FLGQKGISIDHLPP-----SFFIGGNTKQVWENILRDEYDKWDVSTLQ 72 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHHHHHHHHH-----HHHHTTCCCTTSCH-----HHHTTSCGGGCHHHHHGGGGGGSCHHHHH
T ss_pred ccccEEEEcCCCCccccHHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHcCCCHHHHHHHHHHhhcCCCCHHHHH
Confidence 457999999999999998887777776 44555654322111 111111 111122222233333332
Q ss_pred hh----hhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCC
Q 025190 78 GF----VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 78 ~~----~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
.. +.+........++||+.++|+.|+++|+ ++||+....++..++.+|+..+|+.++++++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------- 143 (214)
T 3e58_A 73 EEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKE--------- 143 (214)
T ss_dssp HHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSS---------
T ss_pred HHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccC---------
Confidence 22 2222212234789999999999999876 9999999999999999999999999999998876
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC---CCCCCCeeeCCcCchHHhH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV---NVGEADYALENVNNLPQVV 223 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~---~~~~~~~~~~~~~el~~~l 223 (256)
+||++..+..+++++|+++++|++|||+.+|+.+|+.+|+++++++++. ....++++++++.+|.++|
T Consensus 144 -----~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~i 214 (214)
T 3e58_A 144 -----SKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDLI 214 (214)
T ss_dssp -----CTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGGC
T ss_pred -----CCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhhC
Confidence 7999999999999999999999999999999999999999999998653 3477999999999998764
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=204.36 Aligned_cols=200 Identities=17% Similarity=0.194 Sum_probs=150.6
Q ss_pred CCCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhh-----hHHHHHHcCCCCChhh
Q 025190 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS-----TLAGLRALGYDIGADD 75 (256)
Q Consensus 1 m~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 75 (256)
|++++|+|+||+||||+|+...+..++.+ +.+++|........ ....|. ....+...+.....+.
T Consensus 26 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~ 95 (250)
T 3l5k_A 26 PPQPVTHLIFDMDGLLLDTERLYSVVFQE-----ICNRYDKKYSWDVK-----SLVMGKKALEAAQIIIDVLQLPMSKEE 95 (250)
T ss_dssp CCCCCSEEEEETBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHH-----HHHTTCCHHHHHHHHHHHHTCSSCHHH
T ss_pred cccCCcEEEEcCCCCcCCCHHHHHHHHHH-----HHHHhCCCCCHHHH-----HHhcCCCHHHHHHHHHHHhCCCCCHHH
Confidence 45678999999999999998877777776 44556665322211 111121 1122234454455444
Q ss_pred HhhhhhcCC--CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHh-cCcccccceeEecc--cCCcccccCC
Q 025190 76 YHGFVHGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR-LEIADCFDQIICFE--TMNPNLSKAT 147 (256)
Q Consensus 76 ~~~~~~~~~--~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~-~gl~~~f~~i~~~~--~~~~~~~~~~ 147 (256)
+...+.+.+ ......++||+.++|+.|+++|+ ++||+....+...+.. .|+..+|+.+++++ +.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~------ 169 (250)
T 3l5k_A 96 LVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQH------ 169 (250)
T ss_dssp HHHHHHHHHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCS------
T ss_pred HHHHHHHHHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccC------
Confidence 433332211 12457899999999999999986 8999998888877755 68989999999988 6665
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCC--CcEEEEcCCccccHHHHHcCCeEEEEcCCC----CCCCCCeeeCCcCchHH
Q 025190 148 RPDEFPVLLKPSMDAMKLALHVANVDP--RHALFLDDNIKNVTAGKALGLRTVLVGKTV----NVGEADYALENVNNLPQ 221 (256)
Q Consensus 148 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~--~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~----~~~~~~~~~~~~~el~~ 221 (256)
+||+|.+|..+++++|+++ ++|++|||+.+|+++|+.+|+.++++..+. ....|++++.++.||..
T Consensus 170 --------~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~ 241 (250)
T 3l5k_A 170 --------GKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQP 241 (250)
T ss_dssp --------CTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCG
T ss_pred --------CCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhH
Confidence 8999999999999999988 999999999999999999999999998664 34679999999999977
Q ss_pred hHH
Q 025190 222 VVP 224 (256)
Q Consensus 222 ~l~ 224 (256)
.|.
T Consensus 242 ~l~ 244 (250)
T 3l5k_A 242 ELF 244 (250)
T ss_dssp GGG
T ss_pred HHh
Confidence 653
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=9.2e-30 Score=201.69 Aligned_cols=199 Identities=23% Similarity=0.319 Sum_probs=148.6
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-HHHHcCCCCChhh------
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGADD------ 75 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------ 75 (256)
+++|+|+||+||||+|+...+..++.+ +.+++|.+....... ....|.... .+... ...+.+.
T Consensus 2 ~m~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~-~~~~~~~~~~~~~ 71 (226)
T 3mc1_A 2 SLYNYVLFDLDGTLTDSAEGITKSVKY-----SLNKFDIQVEDLSSL----NKFVGPPLKTSFMEY-YNFDEETATVAID 71 (226)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHTTTCCCSCGGGG----GGGSSSCHHHHHHHH-HCCCHHHHHHHHH
T ss_pred CCCCEEEEeCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhCcCHHHHHHHH-hCCCHHHHHHHHH
Confidence 468999999999999998877777776 445556543211110 001111111 01110 0112211
Q ss_pred -HhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 76 -YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 76 -~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
+...+.+. ......++||+.++++.|+++|+ ++|++....++..++.+|+..+|+.+++++..+.
T Consensus 72 ~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~---------- 140 (226)
T 3mc1_A 72 YYRDYFKAK-GMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGK---------- 140 (226)
T ss_dssp HHHHHHTTT-GGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSS----------
T ss_pred HHHHHHHHh-CcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCC----------
Confidence 22222221 13457899999999999999876 9999999999999999999999999999988876
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHHhHHH
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQVVPE 225 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~~l~~ 225 (256)
+||++..+..+++++|+++++|++|||+.+|+++|+.+|+.++++..+.. +..|++++.++.||.+++..
T Consensus 141 ----~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~ 216 (226)
T 3mc1_A 141 ----LSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILE 216 (226)
T ss_dssp ----SCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHT
T ss_pred ----CCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999986642 25799999999999888754
Q ss_pred H
Q 025190 226 I 226 (256)
Q Consensus 226 ~ 226 (256)
.
T Consensus 217 ~ 217 (226)
T 3mc1_A 217 L 217 (226)
T ss_dssp C
T ss_pred H
Confidence 3
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=194.76 Aligned_cols=202 Identities=19% Similarity=0.325 Sum_probs=148.7
Q ss_pred CCCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCH---HHHHHHHH------HHHHHhh------------h
Q 025190 1 MDSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSE---TKASSLRV------ELFKAYG------------S 59 (256)
Q Consensus 1 m~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~------------~ 59 (256)
|.|++|+|+||+||||+|+...+..++.+ +.+++|.+. ........ ..+..+. .
T Consensus 1 M~m~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (240)
T 3qnm_A 1 MSLKYKNLFFDLDDTIWAFSRNARDTFEE-----VYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQR 75 (240)
T ss_dssp --CCCSEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred CCCCceEEEEcCCCCCcCchhhHHHHHHH-----HHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 55679999999999999998877777776 445566543 11111100 0000000 0
Q ss_pred hHHHHHHcCCCCChhh---HhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccccee
Q 025190 60 TLAGLRALGYDIGADD---YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQI 133 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i 133 (256)
....+...+.. ..+. +...+.... .....++||+.++++.|+ +|+ ++||+....++..++.+|+..+|+.+
T Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~ 152 (240)
T 3qnm_A 76 FFYPLQAVGVE-DEALAERFSEDFFAII-PTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKI 152 (240)
T ss_dssp HHHHHHHTTCC-CHHHHHHHHHHHHHHG-GGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEE
T ss_pred HHHHHHHcCCC-cHHHHHHHHHHHHHHh-hhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeE
Confidence 11122333433 2221 122222211 245789999999999999 765 89999999999999999999999999
Q ss_pred EecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC---CCCCC
Q 025190 134 ICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV---NVGEA 209 (256)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~---~~~~~ 209 (256)
+++++.+. +||++.+|..+++++|++|++|++|||++ +|+++|+.+|+++++++++. ....|
T Consensus 153 ~~~~~~~~--------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~ 218 (240)
T 3qnm_A 153 ILSEDLGV--------------LKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQP 218 (240)
T ss_dssp EEGGGTTC--------------CTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCC
T ss_pred EEeccCCC--------------CCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCC
Confidence 99998876 79999999999999999999999999996 99999999999999998765 34679
Q ss_pred CeeeCCcCchHHhHH
Q 025190 210 DYALENVNNLPQVVP 224 (256)
Q Consensus 210 ~~~~~~~~el~~~l~ 224 (256)
+++++++.|+..+.+
T Consensus 219 d~vi~sl~e~~~~~~ 233 (240)
T 3qnm_A 219 TYHIHSLKELMNLLE 233 (240)
T ss_dssp SEEESSTHHHHHHTC
T ss_pred ceEECCHHHHHHHHh
Confidence 999999999987763
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.6e-29 Score=196.21 Aligned_cols=198 Identities=17% Similarity=0.243 Sum_probs=147.6
Q ss_pred CCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHH------HHHHHHH------------hhhhHHH
Q 025190 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSL------RVELFKA------------YGSTLAG 63 (256)
Q Consensus 2 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~------------~~~~~~~ 63 (256)
|+++|+|+||+||||+|+...+..+... ++......... ...+... .......
T Consensus 2 M~~~k~i~fDlDGTL~d~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (230)
T 3um9_A 2 MHAIKAVVFDLYGTLYDVYSVRTSCERI---------FPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYT 72 (230)
T ss_dssp CSSCCEEEECSBTTTBCGGGGHHHHHHH---------STTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred CCCceEEEEcCCCCcCcchHHHHHHHHH---------hcccHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHHHHHHHH
Confidence 4578999999999999987765544332 11111111000 0000000 0001122
Q ss_pred HHHcCCCCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCC
Q 025190 64 LRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMN 140 (256)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~ 140 (256)
+...+.....+........ +....++||+.++++.|+++|+ ++||+....++..++.+|+..+|+.++++++.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~ 149 (230)
T 3um9_A 73 CGSLGLALDADGEAHLCSE---YLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVR 149 (230)
T ss_dssp HHHHTCCCCHHHHHHHHHH---TTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTT
T ss_pred HHHcCCCCCHHHHHHHHHH---HhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcc
Confidence 3344555555444443333 3567899999999999999986 899999999999999999999999999998887
Q ss_pred cccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----CCCCCeeeCC
Q 025190 141 PNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----VGEADYALEN 215 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~~~~~~~~ 215 (256)
. +||++..+..+++++|++++++++|||+.+|+.+|+.+|+++++++++.. +..|++++++
T Consensus 150 ~--------------~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (230)
T 3um9_A 150 L--------------FKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSD 215 (230)
T ss_dssp C--------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESS
T ss_pred c--------------CCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCC
Confidence 6 79999999999999999999999999999999999999999999986542 2579999999
Q ss_pred cCchHHhHHH
Q 025190 216 VNNLPQVVPE 225 (256)
Q Consensus 216 ~~el~~~l~~ 225 (256)
+.+|.++|..
T Consensus 216 ~~el~~~l~~ 225 (230)
T 3um9_A 216 VGVLASRFSP 225 (230)
T ss_dssp HHHHHHTCCC
T ss_pred HHHHHHHHHH
Confidence 9999887754
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=196.24 Aligned_cols=205 Identities=25% Similarity=0.312 Sum_probs=148.2
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh---h----h-hHHHHHHc-CCCCCh--
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY---G----S-TLAGLRAL-GYDIGA-- 73 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~-~~~~~~~~-~~~~~~-- 73 (256)
+|+|+||+||||+|+...+..++.++++++. ..+........ ...+.... . . ....+... +.....
T Consensus 2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMI--RHGLPVDFETA-YSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWI 78 (241)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHHH--HTTCCSCHHHH-HHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHHH
T ss_pred ccEEEEcCCCCCCCChhhHHHHHHHHHHHHH--HccccccHHHH-HHHHHHhhcccchhHHHHHHHHHHHhcCCccchHH
Confidence 6899999999999998888878877655442 12222111111 11111000 0 0 11112232 322211
Q ss_pred hhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCC
Q 025190 74 DDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
+.+...+.+.. .....++||+.++|+.|+++|+ ++||+....++..++.+|+..+|+.++++++.+.
T Consensus 79 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------- 148 (241)
T 2hoq_A 79 SAGVIAYHNTK-FAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGV--------- 148 (241)
T ss_dssp HHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC---------
T ss_pred HHHHHHHHHHH-HhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCC---------
Confidence 12222222211 2245789999999999999875 9999999999999999999999999999988876
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC-------CCCCeeeCCcCchHHh
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV-------GEADYALENVNNLPQV 222 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~-------~~~~~~~~~~~el~~~ 222 (256)
.||+|..|..+++++|+++++|++|||+. +|+.+|+.+|+.++++.++... ..+++++.++.+|.++
T Consensus 149 -----~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (241)
T 2hoq_A 149 -----KKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEV 223 (241)
T ss_dssp -----CTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHH
T ss_pred -----CCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHH
Confidence 79999999999999999999999999998 9999999999999999765421 2689999999999988
Q ss_pred HHHHH
Q 025190 223 VPEIW 227 (256)
Q Consensus 223 l~~~~ 227 (256)
|...-
T Consensus 224 l~~~~ 228 (241)
T 2hoq_A 224 LARES 228 (241)
T ss_dssp HHHCC
T ss_pred HHHHh
Confidence 87643
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-30 Score=203.14 Aligned_cols=198 Identities=17% Similarity=0.269 Sum_probs=147.7
Q ss_pred CCCeEEEEecCCCccCCCccHHHHH-HHHHHHHHHHHhCCCHHHHHH-----HHHHHHHHhhhhHHHHHHcCCCCChhhH
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAV-KRNIEGFLIEKCGFSETKASS-----LRVELFKAYGSTLAGLRALGYDIGADDY 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (256)
+++|+|+||+||||+|+...+..++ .+ +.+.+|.+...... ....+....+..... ....+
T Consensus 23 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------~~~~~ 89 (231)
T 3kzx_A 23 KQPTAVIFDWYNTLIDTSINIDRTTFYQ-----VLDQMGYKNIDLDSIPNSTIPKYLITLLGKRWKE--------ATILY 89 (231)
T ss_dssp CCCSEEEECTBTTTEETTSSCCHHHHHH-----HHHHTTCCCCCCTTSCTTTHHHHHHHHHGGGHHH--------HHHHH
T ss_pred CCCCEEEECCCCCCcCCchhHHHHHHHH-----HHHHcCCCHHHHHHHhCccHHHHHHHHhCchHHH--------HHHHH
Confidence 5689999999999999998777777 76 34445543211100 000000111111100 01122
Q ss_pred hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCC
Q 025190 77 HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP 153 (256)
Q Consensus 77 ~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (256)
...+..........++||+.++++.|+++|+ ++||+....++..++.+|+..+|+.++++++.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~------------ 157 (231)
T 3kzx_A 90 ENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGT------------ 157 (231)
T ss_dssp HHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSC------------
T ss_pred HHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCC------------
Confidence 3333312225677899999999999999986 8999999999999999999999999999988876
Q ss_pred CCCCCCHHHHHHHHHHcCCCCC-cEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHHh
Q 025190 154 VLLKPSMDAMKLALHVANVDPR-HALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWV 228 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~-~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~~ 228 (256)
+||++..|..+++++|++++ ++++|||+.+|+++|+.+|+.+++++++.. ..+++++.++.+|.++|.++++
T Consensus 158 --~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-~~~~~~~~~~~el~~~l~~~l~ 230 (231)
T 3kzx_A 158 --IKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-IKDILSFKNFYDIRNFICQLIN 230 (231)
T ss_dssp --CTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC------CCEEESSHHHHHHHHHHHHC
T ss_pred --CCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-CCCceeeCCHHHHHHHHHHHhc
Confidence 79999999999999999999 999999999999999999999999976544 5689999999999999988764
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-29 Score=200.09 Aligned_cols=198 Identities=16% Similarity=0.175 Sum_probs=148.5
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHH-HHH-cCCCCChhh---H-
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRA-LGYDIGADD---Y- 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~---~- 76 (256)
+++|+|+||+||||+|+...+..++.++ .+.+|.... ... +....|..... +.. ......... +
T Consensus 17 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~g~~~~-~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 86 (237)
T 4ex6_A 17 AADRGVILDLDGTLADTPAAIATITAEV-----LAAMGTAVS-RGA----ILSTVGRPLPASLAGLLGVPVEDPRVAEAT 86 (237)
T ss_dssp CCCEEEEECSBTTTBCCHHHHHHHHHHH-----HHHTTCCCC-HHH----HHHHTTSCHHHHHHHHHTSCTTSHHHHHHH
T ss_pred ccCCEEEEcCCCCCcCCHHHHHHHHHHH-----HHHcCCCCC-HHH----HHHhcCccHHHHHHHHhCCCCCHHHHHHHH
Confidence 6789999999999999988888887774 444452221 111 11112221111 111 111111111 1
Q ss_pred ---hhhhhcCCCC--CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCC
Q 025190 77 ---HGFVHGRLPY--DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATR 148 (256)
Q Consensus 77 ---~~~~~~~~~~--~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~ 148 (256)
...+.+.+ . ....++||+.++|+.|+++|+ ++||+....++..++.+|+..+|+.++++++++.
T Consensus 87 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------- 158 (237)
T 4ex6_A 87 EEYGRRFGAHV-RAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVER------- 158 (237)
T ss_dssp HHHHHHHHHHH-HHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSS-------
T ss_pred HHHHHHHHHhc-ccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCC-------
Confidence 11111111 2 456789999999999999987 8999999999999999999999999999988876
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC------CCCCeeeCCcCchHHh
Q 025190 149 PDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV------GEADYALENVNNLPQV 222 (256)
Q Consensus 149 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~------~~~~~~~~~~~el~~~ 222 (256)
+||++.+|..+++++|+++++|++|||+.+|+.+|+.+|+.++++..+... ..+++++.++.||.++
T Consensus 159 -------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ 231 (237)
T 4ex6_A 159 -------GKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA 231 (237)
T ss_dssp -------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH
T ss_pred -------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 799999999999999999999999999999999999999999999876432 4799999999999888
Q ss_pred HHH
Q 025190 223 VPE 225 (256)
Q Consensus 223 l~~ 225 (256)
|..
T Consensus 232 l~~ 234 (237)
T 4ex6_A 232 VLD 234 (237)
T ss_dssp HHH
T ss_pred HHc
Confidence 754
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=199.82 Aligned_cols=200 Identities=20% Similarity=0.134 Sum_probs=150.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-----HHHHHcCCCCChhhHh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGYDIGADDYH 77 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 77 (256)
+++|+|+||+||||+++...+..++.. +.+.+|.+...... ....+... ..+...+...+.+.+.
T Consensus 4 ~~~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 73 (233)
T 3s6j_A 4 RPQTSFIFDLDGTLTDSVYQNVAAWKE-----ALDAENIPLAMWRI-----HRKIGMSGGLMLKSLSRETGMSITDEQAE 73 (233)
T ss_dssp -CCCEEEECCBTTTEECHHHHHHHHHH-----HHHHTTCCCCHHHH-----HHHTTSCHHHHHHHHHHC----CCHHHHH
T ss_pred CcCcEEEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHcCCcHHHHHHHHHHhcCCCCCHHHHH
Confidence 468999999999999998877777776 44566765433221 11122211 1222233333433332
Q ss_pred hhh---hcCC--CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 78 GFV---HGRL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 78 ~~~---~~~~--~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
... .+.+ ......++||+.++++.|++.|+ ++|++....++..++.+|+..+|+.++++++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~-------- 145 (233)
T 3s6j_A 74 RLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSY-------- 145 (233)
T ss_dssp HHHHHHHHHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSC--------
T ss_pred HHHHHHHHHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCC--------
Confidence 221 1110 12456889999999999999876 9999999999999999999999999999998876
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHHhH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQVV 223 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~~l 223 (256)
+||++.++..+++++|++++++++|||+.+|+.+|+.+|+.++++..+.. ...|+++++++.+|.++|
T Consensus 146 ------~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 146 ------GKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp ------CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred ------CCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 79999999999999999999999999999999999999999999976532 245999999999998887
Q ss_pred HHH
Q 025190 224 PEI 226 (256)
Q Consensus 224 ~~~ 226 (256)
+..
T Consensus 220 ~~~ 222 (233)
T 3s6j_A 220 DEI 222 (233)
T ss_dssp GGT
T ss_pred HHH
Confidence 543
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-29 Score=200.72 Aligned_cols=195 Identities=14% Similarity=0.263 Sum_probs=144.1
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHhhhhH----HHHH------------H
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFS-ETKASSLRVELFKAYGSTL----AGLR------------A 66 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~------------~ 66 (256)
++|+|+||+||||+|+...+..++.+ +.+.+|.+ ........ ...|... ..+. .
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 73 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNY-----AFEQTGHRHDFTVEDIK----NFFGSGVVVAVTRALAYEAGSSRESLVA 73 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTSCCCCCHHHHH----HHCSSCHHHHHHHHHHHHTTCCHHHHTT
T ss_pred cccEEEEecCCCCccCHHHHHHHHHH-----HHHHcCCCCCCCHHHHH----HhcCccHHHHHHHHHHhccccccccccc
Confidence 57999999999999999888888877 44556664 21111111 1111110 0000 0
Q ss_pred c-------CCCCChhh-------HhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccc
Q 025190 67 L-------GYDIGADD-------YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC 129 (256)
Q Consensus 67 ~-------~~~~~~~~-------~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~ 129 (256)
. ....+.+. +...+.... .....++||+.++|+.|+++|+ ++||+....++..++.+|+. +
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~ 151 (240)
T 2hi0_A 74 FGTKDEQIPEAVTQTEVNRVLEVFKPYYADHC-QIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S 151 (240)
T ss_dssp TTSTTCCCCTTCCHHHHHHHHHHHHHHHHHTS-SSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T
T ss_pred ccccccccCCCCCHHHHHHHHHHHHHHHHHhh-hhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c
Confidence 0 11122222 122222221 3456789999999999999876 89999999999999999998 9
Q ss_pred cceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----
Q 025190 130 FDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN---- 205 (256)
Q Consensus 130 f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~---- 205 (256)
|+.+++++++.. +||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.++++..+..
T Consensus 152 f~~~~~~~~~~~--------------~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~ 217 (240)
T 2hi0_A 152 FDFALGEKSGIR--------------RKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPF 217 (240)
T ss_dssp CSEEEEECTTSC--------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHH
T ss_pred eeEEEecCCCCC--------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhH
Confidence 999999888765 79999999999999999999999999999999999999999999987642
Q ss_pred --CCCCCeeeCCcCchHHhH
Q 025190 206 --VGEADYALENVNNLPQVV 223 (256)
Q Consensus 206 --~~~~~~~~~~~~el~~~l 223 (256)
...+++++.++.++.++|
T Consensus 218 ~~~~~a~~~~~~~~el~~~l 237 (240)
T 2hi0_A 218 LQKHGATVIVDTAEKLEEAI 237 (240)
T ss_dssp HHHTTCCCEECSHHHHHHHH
T ss_pred HHhcCCCEEECCHHHHHHHh
Confidence 146899999998887765
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-28 Score=198.68 Aligned_cols=216 Identities=18% Similarity=0.151 Sum_probs=152.3
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHH--HHHH----HHHHh-------hh---------hHH
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASS--LRVE----LFKAY-------GS---------TLA 62 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~-------~~---------~~~ 62 (256)
+|+|+||+||||+++...+..++.+ ++..+|........ .... ....+ |. ...
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 75 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYAT-----KARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQ 75 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHH-----HHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHH
Confidence 4899999999999988888777776 55667765322211 1000 00000 10 011
Q ss_pred HHHHcCCCCChhhH----hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEe
Q 025190 63 GLRALGYDIGADDY----HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIIC 135 (256)
Q Consensus 63 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~ 135 (256)
.+...+. ...+.+ ...+........+.++||+.++|+.|+++|+ ++||+... ++..++.+|+..+|+.+++
T Consensus 76 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~ 153 (263)
T 3k1z_A 76 TFHLAGV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLT 153 (263)
T ss_dssp HHHHTTC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEE
T ss_pred HHHHcCC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEe
Confidence 2222333 233332 2223332222346799999999999999986 89997764 6889999999999999999
Q ss_pred cccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC-------C
Q 025190 136 FETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV-------G 207 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~-------~ 207 (256)
+++.+. +||+|.+|..+++++|++|++|++|||+. +|+.+|+.+|+.+++++++... .
T Consensus 154 ~~~~~~--------------~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~ 219 (263)
T 3k1z_A 154 SEAAGW--------------PKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSV 219 (263)
T ss_dssp HHHHSS--------------CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHS
T ss_pred ecccCC--------------CCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccC
Confidence 998876 89999999999999999999999999997 9999999999999999987533 2
Q ss_pred CCCeeeCCcCchHHhHHHHHhcCCCCCccccchh
Q 025190 208 EADYALENVNNLPQVVPEIWVSQSDDGDQRISRT 241 (256)
Q Consensus 208 ~~~~~~~~~~el~~~l~~~~~~~~~~~~~~~~~~ 241 (256)
.|++++.++.+|.++|..+.........++..+|
T Consensus 220 ~ad~v~~~l~el~~~l~~~~~~~~~~~~~~~~~~ 253 (263)
T 3k1z_A 220 PKEHILPSLAHLLPALDCLEGSAENLYFQSHHHH 253 (263)
T ss_dssp CGGGEESSGGGHHHHHHHHHHC------------
T ss_pred CCceEeCCHHHHHHHHHHHHhcCCCCcccccccc
Confidence 6999999999999999988766554444444443
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=203.73 Aligned_cols=199 Identities=18% Similarity=0.148 Sum_probs=152.9
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-----HHHHHcCCCCChhhH-
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGYDIGADDY- 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~- 76 (256)
|++|+|+||+||||+|+...+..++.+ +.+.+|.+........ ...|... ......+.......+
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 96 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGIIAQVWQS-----VLAERGLHLDLTEIAM----YFTGQRFDGVLAYLAQQHDFVPPPDFLD 96 (259)
T ss_dssp CCCSEEEEESBTTTEECHHHHHHHHHH-----HHHHTTCCCCHHHHHH----HTTTCCHHHHHHHHHHHHCCCCCTTHHH
T ss_pred cCCCEEEECCCCCcccCHHHHHHHHHH-----HHHHhCCCCCHHHHHH----HHhCCCHHHHHHHHHHHcCCCCCHHHHH
Confidence 578999999999999998877777776 4555676543222111 1111111 112233444443332
Q ss_pred --hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce-eEecccCC-cccccCCCC
Q 025190 77 --HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ-IICFETMN-PNLSKATRP 149 (256)
Q Consensus 77 --~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~-i~~~~~~~-~~~~~~~~~ 149 (256)
...+.+.+ ....++||+.++|+.|+++|+ ++||+....++..++.+|+..+|+. ++++++.+ .
T Consensus 97 ~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~-------- 166 (259)
T 4eek_A 97 VLETRFNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGR-------- 166 (259)
T ss_dssp HHHHHHHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTC--------
T ss_pred HHHHHHHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcC--------
Confidence 22222211 567899999999999998875 9999999999999999999999999 99988877 6
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC----------CCCCeeeCCcCch
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV----------GEADYALENVNNL 219 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~----------~~~~~~~~~~~el 219 (256)
+||++.+|..+++++|+++++|++|||+.+|+++|+.+|+++++++++... ..|++++.++.||
T Consensus 167 ------~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el 240 (259)
T 4eek_A 167 ------GKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAEL 240 (259)
T ss_dssp ------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHH
T ss_pred ------CCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHH
Confidence 799999999999999999999999999999999999999999999866322 4599999999999
Q ss_pred HHhHHHH
Q 025190 220 PQVVPEI 226 (256)
Q Consensus 220 ~~~l~~~ 226 (256)
.++|...
T Consensus 241 ~~~l~~~ 247 (259)
T 4eek_A 241 RAALAEA 247 (259)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9988763
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=201.42 Aligned_cols=208 Identities=16% Similarity=0.125 Sum_probs=151.6
Q ss_pred CCCCeEEEEecCCCccCCCccH-HHHHHHHHHHHHHHHhCCCHHHHHHHH------HHHHHHh----hhhHHHHHHcCCC
Q 025190 2 DSPFNCLVFDLDDTLYPSETGI-AAAVKRNIEGFLIEKCGFSETKASSLR------VELFKAY----GSTLAGLRALGYD 70 (256)
Q Consensus 2 ~~~~k~viFD~DGTL~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~----~~~~~~~~~~~~~ 70 (256)
|+++|+|+||+||||+|+.... ..++.. .++++|.+........ ...+... ..........+..
T Consensus 11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (277)
T 3iru_A 11 AGPVEALILDWAGTTIDFGSLAPVYAFME-----LFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQA 85 (277)
T ss_dssp CCCCCEEEEESBTTTBSTTCCHHHHHHHH-----HHHTTTCCCCHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSC
T ss_pred hccCcEEEEcCCCCcccCCcccHHHHHHH-----HHHHhCCCCCHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccC
Confidence 4568999999999999988765 566665 4455666532221100 0000000 0000111223344
Q ss_pred CChhhHhhhhhc---CC---CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccc-cceeEecccCC
Q 025190 71 IGADDYHGFVHG---RL---PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADC-FDQIICFETMN 140 (256)
Q Consensus 71 ~~~~~~~~~~~~---~~---~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~-f~~i~~~~~~~ 140 (256)
.+.+.+...+.. .+ ......++||+.++|+.|+++|+ ++||+....++..++.+|+..+ |+.++++++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 165 (277)
T 3iru_A 86 SNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVV 165 (277)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSS
T ss_pred CCHHHHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcC
Confidence 444333222111 00 02346889999999999999876 8999999999999999999888 89999998877
Q ss_pred cccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEcCCccccHHHHHcCCeEEEEcCCCC--------------
Q 025190 141 PNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP-RHALFLDDNIKNVTAGKALGLRTVLVGKTVN-------------- 205 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-------------- 205 (256)
. +||++.+|..+++++|+++ ++|++|||+.+|+.+|+.+|+.++++..+..
T Consensus 166 ~--------------~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~ 231 (277)
T 3iru_A 166 R--------------GRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSS 231 (277)
T ss_dssp S--------------CTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCH
T ss_pred C--------------CCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcch
Confidence 6 7999999999999999999 9999999999999999999999999987742
Q ss_pred ---------------CCCCCeeeCCcCchHHhHHHHHh
Q 025190 206 ---------------VGEADYALENVNNLPQVVPEIWV 228 (256)
Q Consensus 206 ---------------~~~~~~~~~~~~el~~~l~~~~~ 228 (256)
...|++++.++.+|.++|..+-.
T Consensus 232 ~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 269 (277)
T 3iru_A 232 DEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNR 269 (277)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHH
T ss_pred hhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHH
Confidence 24699999999999999977644
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-28 Score=193.83 Aligned_cols=200 Identities=18% Similarity=0.240 Sum_probs=149.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh-----------------hhhHHHHH
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY-----------------GSTLAGLR 65 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 65 (256)
+++|+|+||+||||+|+...+..++.+ ....+|.+........ .+.... ........
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETGIVNALQP-----LAKRTGKTFTSDELLE-VFGRNESPQQTETPGALYQDILRAVYDRIAK 77 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHHHHHHTHH-----HHHHHTCCCCHHHHHH-HHHHHHGGGCCSSCCSCHHHHHHHHHHHHHH
T ss_pred ccceEEEEeCCCcCcCCchhHHHHHHH-----HHHHhCCCCCHHHHHH-HHHHHHHHHHhhCCCCChhHHHHHHHHHHHH
Confidence 568999999999999998877777776 3445666533222111 111000 00111223
Q ss_pred HcCCCCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcc
Q 025190 66 ALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPN 142 (256)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~ 142 (256)
..+.....+.... +... .....++||+.++|+.|++ ++ ++||+....+...++. +..+|+.++++++.+.
T Consensus 78 ~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~~- 150 (240)
T 3smv_A 78 EWGLEPDAAEREE-FGTS--VKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVGS- 150 (240)
T ss_dssp HTTCCCCHHHHHH-HHTG--GGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHTS-
T ss_pred HhCCCCCHHHHHH-HHHH--HhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccCC-
Confidence 4454444433322 2221 3556899999999999998 54 9999999999888887 5578999999998886
Q ss_pred cccCCCCCCCCCCCCCCHHHHHHH---HHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCC------------CCC
Q 025190 143 LSKATRPDEFPVLLKPSMDAMKLA---LHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKT------------VNV 206 (256)
Q Consensus 143 ~~~~~~~~~~~~~~Kp~~~~~~~~---~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~------------~~~ 206 (256)
.||+|..|..+ ++++|++|++|++|||+. +|+.+|+.+|+++++++++ ...
T Consensus 151 -------------~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~ 217 (240)
T 3smv_A 151 -------------YKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRM 217 (240)
T ss_dssp -------------CTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSC
T ss_pred -------------CCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCC
Confidence 79999999999 889999999999999997 9999999999999999864 123
Q ss_pred CCCCeeeCCcCchHHhHHHHHh
Q 025190 207 GEADYALENVNNLPQVVPEIWV 228 (256)
Q Consensus 207 ~~~~~~~~~~~el~~~l~~~~~ 228 (256)
..|+++++++.+|.++|..++.
T Consensus 218 ~~ad~v~~~~~el~~~l~~~l~ 239 (240)
T 3smv_A 218 PNVDFRFNSMGEMAEAHKQALK 239 (240)
T ss_dssp CCCSEEESSHHHHHHHHHHHHH
T ss_pred CCCCEEeCCHHHHHHHHHHHhc
Confidence 6799999999999999887653
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=194.57 Aligned_cols=208 Identities=17% Similarity=0.218 Sum_probs=149.2
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-hh-------hhH---------HHHH
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKA-YG-------STL---------AGLR 65 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~---------~~~~ 65 (256)
+++|+|+||+||||+|+...+..++.++++.+ ...+|.+.. ........... .+ ... ..+.
T Consensus 16 ~~~k~viFDlDGTLvds~~~~~~a~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (260)
T 2gfh_A 16 SRVRAVFFDLDNTLIDTAGASRRGMLEVIKLL-QSKYHYKEE-AEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQ 93 (260)
T ss_dssp CCCCEEEECCBTTTBCHHHHHHHHHHHHHHHH-HHTTCCCTH-HHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCCCCCCHHHHHHHHHHHHHHH-HHhcCCcHH-HHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHH
Confidence 57899999999999999988888888755432 234666542 11111111111 11 000 0111
Q ss_pred Hc-CCCCChhhH---hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEecccC
Q 025190 66 AL-GYDIGADDY---HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETM 139 (256)
Q Consensus 66 ~~-~~~~~~~~~---~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~ 139 (256)
.. +.....+.. ...+... ......++||+.++|+.|++... ++||+....++..++.+|+..+|+.++++++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~ 172 (260)
T 2gfh_A 94 ETKGGADNRKLAEECYFLWKST-RLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQ 172 (260)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHH-HHHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGS
T ss_pred HhcCccchHHHHHHHHHHHHHH-HHhcCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCC
Confidence 11 111122211 1111111 12356899999999999997522 99999999999999999999999999999888
Q ss_pred CcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccccHHHHHcCC-eEEEEcCCC-----CCCCCCee
Q 025190 140 NPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDN-IKNVTAGKALGL-RTVLVGKTV-----NVGEADYA 212 (256)
Q Consensus 140 ~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~G~-~~v~v~~~~-----~~~~~~~~ 212 (256)
+. +||+|..|..+++++|++|++|++|||+ .+|+.+|+++|+ .++++.++. ....++++
T Consensus 173 ~~--------------~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~ 238 (260)
T 2gfh_A 173 KE--------------EKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYM 238 (260)
T ss_dssp SS--------------CTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEE
T ss_pred CC--------------CCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEE
Confidence 76 7999999999999999999999999996 899999999999 899997543 23569999
Q ss_pred eCCcCchHHhHHHHH
Q 025190 213 LENVNNLPQVVPEIW 227 (256)
Q Consensus 213 ~~~~~el~~~l~~~~ 227 (256)
+.++.+|.++|..+.
T Consensus 239 i~~~~el~~~l~~~~ 253 (260)
T 2gfh_A 239 VSSVLELPALLQSID 253 (260)
T ss_dssp ESSGGGHHHHHHHHT
T ss_pred ECCHHHHHHHHHHHh
Confidence 999999999887654
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=195.15 Aligned_cols=144 Identities=17% Similarity=0.222 Sum_probs=122.4
Q ss_pred HHcCCCCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCc
Q 025190 65 RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNP 141 (256)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~ 141 (256)
...+.....+........ +....++||+.++|+.|+++|+ ++||+....++..++.+|+..+|+.++++++.+.
T Consensus 77 ~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~ 153 (233)
T 3umb_A 77 ARLNLPLGNHAEATLMRE---YACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRL 153 (233)
T ss_dssp HHTTCCCCHHHHHHHHHH---HHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTC
T ss_pred HHcCCCCCHHHHHHHHHH---HhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCC
Confidence 345555555444433322 2457889999999999999986 9999999999999999999999999999998876
Q ss_pred ccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----CCCCCeeeCCc
Q 025190 142 NLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----VGEADYALENV 216 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~~~~~~~~~ 216 (256)
+||+|..+..+++++|+++++|++|||+.+|+.+|+.+|+.++++.++.. +..|+++++++
T Consensus 154 --------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~ 219 (233)
T 3umb_A 154 --------------YKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDM 219 (233)
T ss_dssp --------------CTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSH
T ss_pred --------------CCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCH
Confidence 89999999999999999999999999999999999999999999976542 34699999999
Q ss_pred CchHHhHHH
Q 025190 217 NNLPQVVPE 225 (256)
Q Consensus 217 ~el~~~l~~ 225 (256)
.||.++|..
T Consensus 220 ~el~~~l~~ 228 (233)
T 3umb_A 220 RDLLQFVQA 228 (233)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 999988753
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-29 Score=198.60 Aligned_cols=200 Identities=22% Similarity=0.291 Sum_probs=147.4
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-HHHHcCCCCCh----hhHhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-GLRALGYDIGA----DDYHG 78 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~ 78 (256)
++|+|+||+||||+|+...+..++.+ +.+.+|.+....... ...+|.... .+......... +.+..
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKDIALALEK-----TLKELGLEEYYPDNV----TKYIGGGVRALLEKVLKDKFREEYVEVFRK 72 (222)
T ss_dssp EECEEEECTBTTTEECHHHHHHHHHH-----HHHHTTCGGGCCSCG----GGGCSSCHHHHHHHHHGGGCCTHHHHHHHH
T ss_pred CCCEEEECCCCcCCCCHHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhCcCHHHHHHHHhChHHHHHHHHHHHH
Confidence 47899999999999998877777776 444556541111100 011111111 01110001111 22223
Q ss_pred hhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 79 FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 79 ~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
.+.... .....++||+.++|+.|+++|+ ++||+....++..++.+|+.++|+.++++++.+.
T Consensus 73 ~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~-------------- 137 (222)
T 2nyv_A 73 HYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGE-------------- 137 (222)
T ss_dssp HHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCT--------------
T ss_pred HHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCC--------------
Confidence 332221 3567899999999999999886 8999999999999999999999999999888775
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC---CCCCCeeeCCcCchHHhHHHHH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN---VGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~---~~~~~~~~~~~~el~~~l~~~~ 227 (256)
+||+|..+..+++++|+++++|++|||+.+|+.+|+.+|+.++++.++.. ...++++++++.+|.++|....
T Consensus 138 ~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~el~~~l~~~~ 212 (222)
T 2nyv_A 138 KKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNSQIPDFTLSRPSDLVKLMDNHI 212 (222)
T ss_dssp TCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCCCCCSEEESSTTHHHHHHHTTS
T ss_pred CCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccccCCCEEECCHHHHHHHHHHhh
Confidence 79999999999999999999999999999999999999999999976532 1578999999999988876543
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=190.47 Aligned_cols=127 Identities=17% Similarity=0.304 Sum_probs=111.9
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....++||+.++|+.|+++|+ ++||+....++..++.+|+..+|+.++++++.+. +||+|..+
T Consensus 92 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------~Kp~~~~~ 157 (232)
T 1zrn_A 92 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV--------------YKPDNRVY 157 (232)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC--------------CTTSHHHH
T ss_pred ccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCC--------------CCCCHHHH
Confidence 356789999999999999886 8999999999999999999999999999988775 79999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----CCCCCeeeCCcCchHHhHHHHH
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----VGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~~~~~~~~~~el~~~l~~~~ 227 (256)
..+++++|+++++|++|||+.+|+.+|+.+|+.+++++++.. ...+++++.++.+|.++|....
T Consensus 158 ~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 226 (232)
T 1zrn_A 158 ELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFETAA 226 (232)
T ss_dssp HHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC----
T ss_pred HHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999976532 2568999999999988876543
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=195.42 Aligned_cols=195 Identities=18% Similarity=0.273 Sum_probs=147.2
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhh-------H
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADD-------Y 76 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 76 (256)
++|+|+||+||||+++...+..++.. +.+.+|.+.... . +....|.............+.+. +
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQY-----SLNSFGIKEDLE-N----LDQFIGPPLHDTFKEYYKFEDKKAKEAVEKY 97 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCGG-G----GGGGSSSCHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred hccEEEEecCCcCccCHHHHHHHHHH-----HHHHcCCCCCHH-H----HHHHhCccHHHHHHHHhCCCHHHHHHHHHHH
Confidence 57999999999999998877777776 445566551111 0 11111211111111111222222 1
Q ss_pred hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCC
Q 025190 77 HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP 153 (256)
Q Consensus 77 ~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (256)
...+.+. ......++||+.++|+.|+++|+ ++|++....++..++.+|+..+|+.++++++.+.
T Consensus 98 ~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------------ 164 (240)
T 3sd7_A 98 REYFADK-GIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGT------------ 164 (240)
T ss_dssp HHHHHHT-GGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSC------------
T ss_pred HHHHHHh-cccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCC------------
Confidence 2222221 13456899999999999999986 9999999999999999999999999999988876
Q ss_pred CCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchHHhH
Q 025190 154 VLLKPSMDAMKLALHVANVD-PRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLPQVV 223 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~~~l 223 (256)
+||++..+..+++++|++ +++|++|||+.+|+++|+.+|+.++++..+.. +..+++++.++.||.++|
T Consensus 165 --~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 165 --RVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp --CCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred --CCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 799999999999999999 99999999999999999999999999986543 257999999999998875
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-28 Score=194.39 Aligned_cols=191 Identities=21% Similarity=0.234 Sum_probs=129.8
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-----HHHHHcCC--CCChhhH
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGY--DIGADDY 76 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~ 76 (256)
++|+|+||+||||+|+...+..++.+ +.+.+|.+..... +....|... ..+...+. ..+.+.+
T Consensus 1 ~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (233)
T 3nas_A 1 SLKAVIFDLDGVITDTAEYHFLAWKH-----IAEQIDIPFDRDM-----NERLKGISREESLESILIFGGAETKYTNAEK 70 (233)
T ss_dssp -CCEEEECSBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHTTTCCHHHHHHHHHHHTTCTTTSCHHHH
T ss_pred CCcEEEECCCCCcCCCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHcCCCHHHHHHHHHHHhCCCCCCCHHHH
Confidence 36899999999999998877777776 4456676533221 111122211 12223333 3333332
Q ss_pred hh-------hhhcCC-CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCccccc
Q 025190 77 HG-------FVHGRL-PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK 145 (256)
Q Consensus 77 ~~-------~~~~~~-~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 145 (256)
.. .+.+.. ......++||+.++|+.|+++|+ ++||+.. ++..++.+|+..+|+.++++++++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~---- 144 (233)
T 3nas_A 71 QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAK---- 144 (233)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------
T ss_pred HHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCC----
Confidence 21 111111 01223489999999999999986 7888744 8889999999999999999888776
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchH
Q 025190 146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLP 220 (256)
Q Consensus 146 ~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~ 220 (256)
+||+|.+|..+++++|+++++|++|||+.+|+.+|+.+|+.+++++.......|++++.++.++.
T Consensus 145 ----------~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~ad~v~~s~~el~ 209 (233)
T 3nas_A 145 ----------GKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQTSDLT 209 (233)
T ss_dssp --------------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC-------CSEECSSGGGCC
T ss_pred ----------CCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccccCCEEeCChHhCC
Confidence 79999999999999999999999999999999999999999999987765558999999999976
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-28 Score=191.35 Aligned_cols=193 Identities=19% Similarity=0.292 Sum_probs=144.9
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-HHHHHcCCCCChhhHhh----
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGYDIGADDYHG---- 78 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---- 78 (256)
++|+|+||+||||+|+...+..++.+ +.+.+|....... +....|... ..+..++.. ...+..
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~ 70 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPFSPAQ-----AQKTFPMAAEQAMTELGIA--ASEFDHFQAQ 70 (209)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHH-----HHHTTTCCCCHHH-----HHHHTTSCHHHHHHHTTCC--GGGHHHHHHH
T ss_pred cccEEEEcCCCCCcCCHHHHHHHHHH-----HHHHhCCCCCHHH-----HHHHcCCcHHHHHHHcCCC--HHHHHHHHHH
Confidence 57999999999999998877777776 4455666432221 112233322 223333332 222211
Q ss_pred hhhcCC-CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 79 FVHGRL-PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 79 ~~~~~~-~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
.+.... ......++||+.++|+.|+++ + ++||+....++..++.+|+..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------------- 136 (209)
T 2hdo_A 71 YEDVMASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPK------------- 136 (209)
T ss_dssp HHHHHTTCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSC-------------
T ss_pred HHHHHhhhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCC-------------
Confidence 111110 124567899999999999987 5 8999999999999999999999999999988876
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----CCCCCeeeCCcCchHHhH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN----VGEADYALENVNNLPQVV 223 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----~~~~~~~~~~~~el~~~l 223 (256)
.||++..+..+++++|+++++|++|||+.+|+++|+.+|+.+++++++.. -..+++++.++.+|.++|
T Consensus 137 -~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~l 208 (209)
T 2hdo_A 137 -RKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILELF 208 (209)
T ss_dssp -CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGGC
T ss_pred -CCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHHHhh
Confidence 79999999999999999999999999999999999999999999984431 122999999999998765
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=191.85 Aligned_cols=126 Identities=15% Similarity=0.240 Sum_probs=112.9
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....++||+.++|+.|+++|+ ++||+....++..++.+|+..+|+.++++++.+. .||+|..+
T Consensus 102 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------~Kp~~~~~ 167 (240)
T 2no4_A 102 KELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKI--------------YKPDPRIY 167 (240)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTC--------------CTTSHHHH
T ss_pred hcCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCC--------------CCCCHHHH
Confidence 356889999999999999886 8999999999999999999999999999988876 79999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----CCCC-CeeeCCcCchHHhHHHH
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN----VGEA-DYALENVNNLPQVVPEI 226 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----~~~~-~~~~~~~~el~~~l~~~ 226 (256)
..+++++|+++++|++|||+.+|+.+|+.+|+.++++.++.. ...+ +++++++.+|.++|..+
T Consensus 168 ~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 235 (240)
T 2no4_A 168 QFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLLAKN 235 (240)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHHCC-
T ss_pred HHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999976542 2457 99999999998877543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=187.95 Aligned_cols=202 Identities=15% Similarity=0.174 Sum_probs=145.8
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHH-HHHH----HHHh---hhh-------H-HHHHHc
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSL-RVEL----FKAY---GST-------L-AGLRAL 67 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~---~~~-------~-~~~~~~ 67 (256)
++|+|+||+||||+|+.+.+..++.+ +.+.+|......... .... +..+ |.. . ......
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 77 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQ-----LAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKL 77 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHH-----HHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHh
Confidence 47999999999999988777766666 445566654432210 0000 0000 111 0 111222
Q ss_pred CCCC-ChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCC---hHHHHHHHHhcCcccccceeEecccCC
Q 025190 68 GYDI-GADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKRLEIADCFDQIICFETMN 140 (256)
Q Consensus 68 ~~~~-~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~---~~~~~~~l~~~gl~~~f~~i~~~~~~~ 140 (256)
+... ....+...+.... ....++|++.++|+.|+++|+ ++||+. ...++..++.+|+..+|+.++++++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~ 155 (235)
T 2om6_A 78 KVDVELVKRATARAILNV--DESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVL 155 (235)
T ss_dssp TCCHHHHHHHHHHHHHHC--CGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHT
T ss_pred CCCHHHHHHHHHHHHHhc--cccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccC
Confidence 2221 1111222222211 222469999999999999876 899998 888999999999999999999998877
Q ss_pred cccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC----CCCCeeeCC
Q 025190 141 PNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV----GEADYALEN 215 (256)
Q Consensus 141 ~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~----~~~~~~~~~ 215 (256)
. .||+|..+..+++++|+++++|++|||+. ||+++|+.+|+.+++++++... ..+++++.+
T Consensus 156 ~--------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (235)
T 2om6_A 156 S--------------YKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPS 221 (235)
T ss_dssp C--------------CTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESS
T ss_pred C--------------CCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhh
Confidence 6 79999999999999999999999999999 9999999999999999876321 347899999
Q ss_pred cCchHHhHHHH
Q 025190 216 VNNLPQVVPEI 226 (256)
Q Consensus 216 ~~el~~~l~~~ 226 (256)
+.+|.++|..+
T Consensus 222 ~~el~~~l~~~ 232 (235)
T 2om6_A 222 IANLKDVIELI 232 (235)
T ss_dssp GGGHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 99999888664
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=190.27 Aligned_cols=197 Identities=13% Similarity=0.208 Sum_probs=145.5
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhh----------------------h
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS----------------------T 60 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~ 60 (256)
|++|+|+||+||||+|+...+..++.+ +.+.+|++......... +...... .
T Consensus 20 m~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (254)
T 3umc_A 20 QGMRAILFDVFGTLVDWRSSLIEQFQA-----LERELGGTLPCVELTDR-WRQQYKPAMDRVRNGQAPWQHLDQLHRQSL 93 (254)
T ss_dssp SSCCEEEECCBTTTEEHHHHHHHHHHH-----HHHHSSSCCCHHHHHHH-HHHHTHHHHHHHHTTSSCCCCHHHHHHHHH
T ss_pred cCCcEEEEeCCCccEecCccHHHHHHH-----HHHHhcCCCCHHHHHHH-HHHHHHHHHHHHhcccCCcccHHHHHHHHH
Confidence 578999999999999988877777776 45566765332211111 1100000 0
Q ss_pred HHHHHHcCCCCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEeccc
Q 025190 61 LAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFET 138 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~ 138 (256)
...+...+.............. +....++||+.++|+.|++... ++||+....++..++.+|+. |+.+++++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~ 168 (254)
T 3umc_A 94 EALAGEFGLALDEALLQRITGF---WHRLRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP--WDMLLCADL 168 (254)
T ss_dssp HHHHHHTTCCCCHHHHHHHHGG---GGSCEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHH
T ss_pred HHHHHHhCCCCCHHHHHHHHHH---HhcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecc
Confidence 1112233333333333222221 3456789999999999998632 89999999999999999986 999999988
Q ss_pred CCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC----CC-------CCC
Q 025190 139 MNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK----TV-------NVG 207 (256)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~----~~-------~~~ 207 (256)
.+. +||++.+|+.+++++|+++++|++|||+.+|+++|+.+|+.++++++ +. ...
T Consensus 169 ~~~--------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~ 234 (254)
T 3umc_A 169 FGH--------------YKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQ 234 (254)
T ss_dssp HTC--------------CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSS
T ss_pred ccc--------------CCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCC
Confidence 776 89999999999999999999999999999999999999999999983 22 145
Q ss_pred CCCeeeCCcCchHHhHH
Q 025190 208 EADYALENVNNLPQVVP 224 (256)
Q Consensus 208 ~~~~~~~~~~el~~~l~ 224 (256)
.|+++++++.+|.++|.
T Consensus 235 ~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 235 DWDLIASDLLDLHRQLA 251 (254)
T ss_dssp CCSEEESSHHHHHHHHH
T ss_pred CCcEEECCHHHHHHHhc
Confidence 79999999999988773
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=191.21 Aligned_cols=199 Identities=19% Similarity=0.233 Sum_probs=145.6
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH------HHHHh--------------hh-hH
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVE------LFKAY--------------GS-TL 61 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~--------------~~-~~ 61 (256)
+++|+|+||+||||+|+...+..++.+ +.+++|++.......... .+..+ .. ..
T Consensus 13 ~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDWRTGIATAVAD-----YAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLD 87 (254)
T ss_dssp SBCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHH
T ss_pred CCceEEEEeCCCceecCchHHHHHHHH-----HHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 468999999999999998777777776 445566643322111100 00000 00 00
Q ss_pred HHHHHcCC---CCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEec
Q 025190 62 AGLRALGY---DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICF 136 (256)
Q Consensus 62 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~ 136 (256)
..+...+. ....+........ +....++||+.++|+.|++... ++||+....++..++.+|+. |+.++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~ 162 (254)
T 3umg_A 88 FVLRESGIDPTNHDSGELDELARA---WHVLTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGS 162 (254)
T ss_dssp HHHHHTTCCGGGSCHHHHHHHHGG---GGSCCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC--CSCCCCH
T ss_pred HHHHHhCCCcCcCCHHHHHHHHHH---HhhCcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEc
Confidence 11223333 2233333222221 3567889999999999987632 89999999999999999986 8999998
Q ss_pred ccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-----------C
Q 025190 137 ETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-----------N 205 (256)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-----------~ 205 (256)
+..+. .||++.+|..+++++|+++++|++|||+.+|+.+|+.+|+++++++++. .
T Consensus 163 ~~~~~--------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~ 228 (254)
T 3umg_A 163 DINRK--------------YKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAP 228 (254)
T ss_dssp HHHTC--------------CTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSC
T ss_pred CcCCC--------------CCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccc
Confidence 88776 7999999999999999999999999999999999999999999998432 2
Q ss_pred CCCCCeeeCCcCchHHhHHH
Q 025190 206 VGEADYALENVNNLPQVVPE 225 (256)
Q Consensus 206 ~~~~~~~~~~~~el~~~l~~ 225 (256)
...|+++++++.+|.++|..
T Consensus 229 ~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 229 TGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp SSCCSEEESSHHHHHHHHHH
T ss_pred cCCCceEECCHHHHHHHhcC
Confidence 46789999999999988754
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=192.79 Aligned_cols=197 Identities=16% Similarity=0.290 Sum_probs=146.2
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-----HHHHH----cCCCCCh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRA----LGYDIGA 73 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~~~~~~~ 73 (256)
.++|+|+||+||||+|+...+..++.+ +++.+|.+......... ..+... ..+.. .+.....
T Consensus 21 ~~~k~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~ 91 (243)
T 2hsz_A 21 TQFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLVMT----WIGNGADVLSQRAVDWACKQAEKELTE 91 (243)
T ss_dssp SSCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHHHH----HCSSCHHHHHHHHHHHHHHHHTCCCCH
T ss_pred ccCCEEEEcCCCcCCCCHHHHHHHHHH-----HHHHcCCCCCCHHHHHH----HhCchHHHHHHHHhhhhhccccccCCH
Confidence 468999999999999998877777776 44556664322111110 111100 00100 1222332
Q ss_pred hhH-------hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCccc
Q 025190 74 DDY-------HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNL 143 (256)
Q Consensus 74 ~~~-------~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~ 143 (256)
+.+ ...+.... .....++||+.++|+.|+++|+ ++||+....++..++.+|+..+|+.++++++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-- 168 (243)
T 2hsz_A 92 DEFKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE-- 168 (243)
T ss_dssp HHHHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS--
T ss_pred HHHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCC--
Confidence 222 22222211 3456889999999999999886 8999999999999999999999999999887765
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcC
Q 025190 144 SKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVN 217 (256)
Q Consensus 144 ~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~ 217 (256)
.||+|..+..+++++|+++++|++|||+.+|+.+|+.+|+.++++.++.. ...+++++.++.
T Consensus 169 ------------~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~ 236 (243)
T 2hsz_A 169 ------------IKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFA 236 (243)
T ss_dssp ------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGG
T ss_pred ------------CCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHH
Confidence 79999999999999999999999999999999999999999999987532 346899999999
Q ss_pred chHHhH
Q 025190 218 NLPQVV 223 (256)
Q Consensus 218 el~~~l 223 (256)
+|.++|
T Consensus 237 el~~~l 242 (243)
T 2hsz_A 237 DILKIT 242 (243)
T ss_dssp GGGGGT
T ss_pred HHHHHh
Confidence 987765
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=186.36 Aligned_cols=194 Identities=16% Similarity=0.258 Sum_probs=141.9
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH-HHhhhhHHHHH-HcCCCCChh---hHhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELF-KAYGSTLAGLR-ALGYDIGAD---DYHG 78 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~---~~~~ 78 (256)
++|+|+||+||||+|+...+..++.++ .+.+|........ ..... .........+. ... .+.+ .+..
T Consensus 3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~-----~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 74 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDSYEAILSGIEET-----FAQFSIPYDKEKV-REFIFKYSVQDLLVRVAEDRN--LDVEVLNQVRA 74 (207)
T ss_dssp -CCEEEECTBTTTEECHHHHHHHHHHH-----HHHHTCCCCHHHH-HHHHHHSCHHHHHHHHHHHHT--CCHHHHHHHHH
T ss_pred cccEEEEeCCCcccccHHHHHHHHHHH-----HHHcCCCCCHHHH-HHHHccccHHHHHHHhhchhh--ccHHHHHHHHH
Confidence 579999999999999988777777663 3445553222111 11000 00000011111 111 1111 1222
Q ss_pred hhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 79 FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 79 ~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
.+.+.+ .....++|++.++++.|+++|+ ++|++.....+ .++.+++..+|+.++++++.+.
T Consensus 75 ~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~-------------- 138 (207)
T 2go7_A 75 QSLAEK-NAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFV-------------- 138 (207)
T ss_dssp HHHTTC-GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCC--------------
T ss_pred HHHHhc-cccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCC--------------
Confidence 222222 3566789999999999999875 89999988888 9999999999999999888765
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVV 223 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l 223 (256)
.||++..+..+++++|++++++++|||+.+|+++|+.+|+.+++++++. . .+++++.++.||.++|
T Consensus 139 ~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 139 RKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-EGNHRIQALADISRIF 204 (207)
T ss_dssp CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-TTEEECSSTTHHHHHT
T ss_pred CCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-CCCEEeCCHHHHHHHH
Confidence 7999999999999999999999999999999999999999999998776 4 8999999999987765
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-27 Score=186.86 Aligned_cols=126 Identities=26% Similarity=0.415 Sum_probs=114.4
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
...++||+.++|+.|+++ + ++||+....++..++.+|+..+|+.++++++.+. +||++..+.
T Consensus 98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~--------------~kp~~~~~~ 162 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGF--------------FKPHPRIFE 162 (234)
T ss_dssp HCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTB--------------CTTSHHHHH
T ss_pred hCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCC--------------CCcCHHHHH
Confidence 467899999999999988 5 9999999999999999999999999999998876 799999999
Q ss_pred HHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC----CCCCeeeCCcCchHHhHHHHHh
Q 025190 165 LALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV----GEADYALENVNNLPQVVPEIWV 228 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~----~~~~~~~~~~~el~~~l~~~~~ 228 (256)
.+++++|+++++|++|||+. ||+.+|+.+|+.+++++.+... ..|++++.++.+|.++|..+..
T Consensus 163 ~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~~~~ 231 (234)
T 3u26_A 163 LALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDELNG 231 (234)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHHHHHC-
T ss_pred HHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHHHHHhh
Confidence 99999999999999999998 9999999999999999876432 3799999999999999877643
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-26 Score=183.95 Aligned_cols=125 Identities=22% Similarity=0.395 Sum_probs=112.9
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....++||+.++|+.|+ |+ ++||+....++..++.+|+..+|+.++++++.+. +||+|..|
T Consensus 90 ~~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~--------------~Kp~~~~~ 153 (253)
T 1qq5_A 90 NRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV--------------FKPHPDSY 153 (253)
T ss_dssp GSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC--------------CTTSHHHH
T ss_pred hcCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCC--------------CCCCHHHH
Confidence 45689999999999999 54 9999999999999999999999999999998876 79999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC-----------------------CC-----CCCCCCeeeCC
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK-----------------------TV-----NVGEADYALEN 215 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~-----------------------~~-----~~~~~~~~~~~ 215 (256)
..+++++|+++++|++|||+.+|+++|+.+|+.++++++ +. ....|++++.+
T Consensus 154 ~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (253)
T 1qq5_A 154 ALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPA 233 (253)
T ss_dssp HHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESS
T ss_pred HHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCC
Confidence 999999999999999999999999999999999999987 21 23569999999
Q ss_pred cCchHHhHHHHH
Q 025190 216 VNNLPQVVPEIW 227 (256)
Q Consensus 216 ~~el~~~l~~~~ 227 (256)
+.+|.++|..+.
T Consensus 234 ~~el~~~l~~~~ 245 (253)
T 1qq5_A 234 LGDLPRLVRGMA 245 (253)
T ss_dssp GGGHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999887654
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.95 E-value=6e-28 Score=191.14 Aligned_cols=200 Identities=14% Similarity=0.147 Sum_probs=136.2
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhh-------------hHHHHHHcCCC
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS-------------TLAGLRALGYD 70 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 70 (256)
++|+|+||+||||+|+...+..++.+ +...+|.+..... ....+....|. ....+...+..
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVFYEKVYQ-----VLKDNGYDLDLRK-VFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIY 75 (220)
T ss_dssp CCCEEEECSBTTTEEEEETTHHHHHH-----HHHHTTCCCCHHH-HHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCC
T ss_pred CceEEEEcCCCceecccccHHHHHHH-----HHHHhCCCCCHHH-HHHHHHHHhhhccCCCccccccccHHHHHHHcCCC
Confidence 57999999999999999888777776 4556676543221 11122111121 12333444444
Q ss_pred CChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCC
Q 025190 71 IGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT 147 (256)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 147 (256)
...+.+..............++||+.++|+.|+++|+ ++||+.. .++..++.+|+..+|+.++++++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~------ 148 (220)
T 2zg6_A 76 PSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKA------ 148 (220)
T ss_dssp CCHHHHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-------------
T ss_pred CcHHHHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCC------
Confidence 3333333333322223356789999999999999986 8888866 57889999999999999999988875
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc-ccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHH
Q 025190 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIK-NVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 148 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~-Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~ 226 (256)
.||+|..|..+++++|++| ++|||+.+ |+.+|+++|+.++++.++......+++++++.+|.++|..+
T Consensus 149 --------~Kp~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~i~~l~el~~~l~~~ 217 (220)
T 2zg6_A 149 --------VKPNPKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDVRDRVKNLREALQKIEEM 217 (220)
T ss_dssp ------------CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTCCSCBSSHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCcceEECCHHHHHHHHHHh
Confidence 7999999999999999988 99999998 99999999999999976532222256788888888877664
Q ss_pred H
Q 025190 227 W 227 (256)
Q Consensus 227 ~ 227 (256)
+
T Consensus 218 ~ 218 (220)
T 2zg6_A 218 N 218 (220)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-28 Score=193.74 Aligned_cols=202 Identities=16% Similarity=0.170 Sum_probs=145.8
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-----HHHHHcCCCCC--h---
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGYDIG--A--- 73 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~--- 73 (256)
++|+|+||+||||+|+...+..++.++++++ +|.+... . +....|... ..+...+.... .
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~----~g~~~~~--~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEV----YGTEGST--G----SHDFSGKMDGAIIYEVLSNVGLERAEIADKF 72 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHH----HSCCCCC---------CCTTCCHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHH----hCCCCcc--c----hhhhcCCChHHHHHHHHHHcCCCcccchhHH
Confidence 4799999999999999988877777744321 4443220 0 001111111 11222222211 1
Q ss_pred hhH----hhhhhcCCCCCCCCCChhHHHHHHhhhcC-cE---EEecCChHHHHHHHHhcCcccccceeEecccCCccccc
Q 025190 74 DDY----HGFVHGRLPYDLIKPDPQLRNLLCSITQR-KI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK 145 (256)
Q Consensus 74 ~~~----~~~~~~~~~~~~~~~~pg~~~~l~~l~~~-~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 145 (256)
..+ ...+.+........++||+.++|+.|+++ |+ ++|++....++..++.+|+..+|+.++++++...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~---- 148 (234)
T 2hcf_A 73 DKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALD---- 148 (234)
T ss_dssp HHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSS----
T ss_pred HHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcC----
Confidence 111 11122111114567899999999999998 86 9999999999999999999999998777766543
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHcC--CCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC------CCCCeeeCCcC
Q 025190 146 ATRPDEFPVLLKPSMDAMKLALHVAN--VDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV------GEADYALENVN 217 (256)
Q Consensus 146 ~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~------~~~~~~~~~~~ 217 (256)
..||++..++.+++++| +++++|++|||+.+|+++|+.+|+.++++.++... ..+++++.++.
T Consensus 149 ---------~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~ 219 (234)
T 2hcf_A 149 ---------RNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFA 219 (234)
T ss_dssp ---------GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSC
T ss_pred ---------ccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHH
Confidence 25788999999999999 99999999999999999999999999999876432 35899999999
Q ss_pred chHHhHHHHHh
Q 025190 218 NLPQVVPEIWV 228 (256)
Q Consensus 218 el~~~l~~~~~ 228 (256)
+|.++|..+..
T Consensus 220 el~~~l~~~~~ 230 (234)
T 2hcf_A 220 ETDEVLASILT 230 (234)
T ss_dssp CHHHHHHHHHC
T ss_pred hHHHHHHHHhc
Confidence 99999987663
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-26 Score=184.45 Aligned_cols=202 Identities=16% Similarity=0.155 Sum_probs=143.8
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCH---HH--HHHHHHHHHHHhhhhHHH---------HHHcC
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSE---TK--ASSLRVELFKAYGSTLAG---------LRALG 68 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~---------~~~~~ 68 (256)
|++|+|+||+||||+|+...+..++.++++.+ ...|... .. ............|..... ....+
T Consensus 11 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l--~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 88 (251)
T 2pke_A 11 QAIQLVGFDGDDTLWKSEDYYRTAEADFEAIL--SGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTE 88 (251)
T ss_dssp CSCCEEEECCBTTTBCCHHHHHHHHHHHHHHH--TTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTT
T ss_pred CceeEEEEeCCCCCccCcHhHHHHHHHHHHHH--HHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcC
Confidence 45899999999999999888887777654422 4566654 11 000000101122222111 11223
Q ss_pred CCCChhh---HhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcc
Q 025190 69 YDIGADD---YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPN 142 (256)
Q Consensus 69 ~~~~~~~---~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~ 142 (256)
.....+. +...+.+.+ .....++||+.++|+.|+ +|+ ++||+....++..++.+|+..+|+.++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~------ 160 (251)
T 2pke_A 89 ARIEARDIQRIVEIGRATL-QHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV------ 160 (251)
T ss_dssp TCCCHHHHHHHHHHHHHHH-TCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE------
T ss_pred CCCChHHHHHHHHHHHHHH-hccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee------
Confidence 3333222 222222211 356788999999999999 765 89999999999999999999999988773
Q ss_pred cccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC----------CCCCCe
Q 025190 143 LSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN----------VGEADY 211 (256)
Q Consensus 143 ~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~----------~~~~~~ 211 (256)
+||+|..+..+++++|+++++|++|||+. +|+.+|+.+|+.++++.++.. ...+++
T Consensus 161 -------------~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~ 227 (251)
T 2pke_A 161 -------------SEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRL 227 (251)
T ss_dssp -------------SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTE
T ss_pred -------------CCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCe
Confidence 59999999999999999999999999999 999999999999999976531 246888
Q ss_pred -eeCCcCchHHhHHHHH
Q 025190 212 -ALENVNNLPQVVPEIW 227 (256)
Q Consensus 212 -~~~~~~el~~~l~~~~ 227 (256)
+++++.+|.++|..+.
T Consensus 228 ~~i~~~~el~~~l~~~~ 244 (251)
T 2pke_A 228 REVPDPSGWPAAVRALD 244 (251)
T ss_dssp EECSSGGGHHHHHHHHH
T ss_pred eeeCCHHHHHHHHHHhC
Confidence 9999999999887654
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-27 Score=186.43 Aligned_cols=201 Identities=20% Similarity=0.279 Sum_probs=147.9
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh-----HHHHHHcCCCCChhhH-
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-----LAGLRALGYDIGADDY- 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~- 76 (256)
+++|+|+||+||||+++...+..++.+ +.+.+|.+........ ...|.. .......+........
T Consensus 2 ~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (229)
T 2fdr_A 2 SGFDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEEMGE----RFAGMTWKNILLQVESEASIPLSASLLD 72 (229)
T ss_dssp -CCSEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHHHH----HHTTCCHHHHHHHHHHHHCCCCCTHHHH
T ss_pred CCccEEEEcCCCCcCccHHHHHHHHHH-----HHHHhCCCCCHHHHHH----HHhCCCHHHHHHHHHHHcCCCCCHHHHH
Confidence 357999999999999998877777666 4455676533211111 111111 1112223333332221
Q ss_pred --hhhhhcCCCCCCCCCChhHHHHHHhhhcCcEEEecCChHHHHHHHHhcCccccc-ceeEecccCCcccccCCCCCCCC
Q 025190 77 --HGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFP 153 (256)
Q Consensus 77 --~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~~gl~~~f-~~i~~~~~~~~~~~~~~~~~~~~ 153 (256)
...+.+.. .....++||+.++++.|+.+-.++|++....++..++.+++..+| +.+++++..+.
T Consensus 73 ~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~------------ 139 (229)
T 2fdr_A 73 KSEKLLDMRL-ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA------------ 139 (229)
T ss_dssp HHHHHHHHHH-HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT------------
T ss_pred HHHHHHHHHh-hcCCccCcCHHHHHHHhCCCEEEEECCChhHHHHHHHhCChHHhccceEEecccccc------------
Confidence 22221111 134678999999999998744499999999999999999999999 99999887765
Q ss_pred CCC--CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC----------CCCCeeeCCcCchHH
Q 025190 154 VLL--KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV----------GEADYALENVNNLPQ 221 (256)
Q Consensus 154 ~~~--Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~----------~~~~~~~~~~~el~~ 221 (256)
+ ||++..+.++++++|++++++++|||+.+|+++|+.+|+.+++++++... ..+++++.++.+|.+
T Consensus 140 --~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~ 217 (229)
T 2fdr_A 140 --DRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPA 217 (229)
T ss_dssp --TCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHH
T ss_pred --CCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHH
Confidence 7 99999999999999999999999999999999999999999999876542 138999999999999
Q ss_pred hHHHHH
Q 025190 222 VVPEIW 227 (256)
Q Consensus 222 ~l~~~~ 227 (256)
+|+.++
T Consensus 218 ~l~~~~ 223 (229)
T 2fdr_A 218 VIAAMA 223 (229)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 887764
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=184.06 Aligned_cols=197 Identities=18% Similarity=0.208 Sum_probs=139.5
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH---HHhhhh---------HHHHHHcCCCCC
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELF---KAYGST---------LAGLRALGYDIG 72 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------~~~~~~~~~~~~ 72 (256)
+|+|+||+||||+++...+..++...++. +...|.............. ...+.. .......+....
T Consensus 8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPFFQEVEKQYTDL--LKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIA 85 (234)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHH--TGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCC
T ss_pred ccEEEEeCCCCCccCcchHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCC
Confidence 89999999999999988777666653332 2334422111111111000 111111 111122233444
Q ss_pred hhhHhh---hhhcCCCCCCCCCChhHHHHHHhhhcCc-E---EEecCChHHHHHHHHhcCcccccceeEecccCCccccc
Q 025190 73 ADDYHG---FVHGRLPYDLIKPDPQLRNLLCSITQRK-I---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSK 145 (256)
Q Consensus 73 ~~~~~~---~~~~~~~~~~~~~~pg~~~~l~~l~~~~-~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~ 145 (256)
.+.... .+.+.+ .....++||+.++++.|+++| + ++||+....++..++.+|+.++|+.++++
T Consensus 86 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~--------- 155 (234)
T 3ddh_A 86 ADIIRQIVDLGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVM--------- 155 (234)
T ss_dssp HHHHHHHHHHHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEE---------
T ss_pred HHHHHHHHHHHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeec---------
Confidence 443322 222222 356789999999999999977 5 89999999999999999999999998863
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC---------CCCCCCeeeCC
Q 025190 146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV---------NVGEADYALEN 215 (256)
Q Consensus 146 ~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~---------~~~~~~~~~~~ 215 (256)
+||+|.+++.+++++|++|++|++|||+. +|+.+|+.+|++++++.++. ....+++++++
T Consensus 156 ----------~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~ 225 (234)
T 3ddh_A 156 ----------SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKR 225 (234)
T ss_dssp ----------SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSS
T ss_pred ----------CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceeccc
Confidence 69999999999999999999999999997 99999999999999995432 12335999999
Q ss_pred cCchHHhH
Q 025190 216 VNNLPQVV 223 (256)
Q Consensus 216 ~~el~~~l 223 (256)
+.||.++|
T Consensus 226 l~el~~~l 233 (234)
T 3ddh_A 226 LDDLLSLL 233 (234)
T ss_dssp GGGHHHHC
T ss_pred HHHHHHhc
Confidence 99998765
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=188.00 Aligned_cols=206 Identities=16% Similarity=0.158 Sum_probs=145.0
Q ss_pred CC-CCCeEEEEecCCCccCCCc-cHHHHHHHHHHHHHHHHhCCCHHHHHHHH------HHHHHHh--h--hhHHHHHHcC
Q 025190 1 MD-SPFNCLVFDLDDTLYPSET-GIAAAVKRNIEGFLIEKCGFSETKASSLR------VELFKAY--G--STLAGLRALG 68 (256)
Q Consensus 1 m~-~~~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--~--~~~~~~~~~~ 68 (256)
|+ |++|+|+||+||||+|+.. .+..++.+ +++++|+......... ....... + .........+
T Consensus 1 M~~m~ik~i~fDlDGTLld~~~~~~~~~~~~-----~l~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (267)
T 1swv_A 1 MDRMKIEAVIFAWAGTTVDYGCFAPLEVFME-----IFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFR 75 (267)
T ss_dssp ----CCCEEEECSBTTTBSTTCCTTHHHHHH-----HHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHS
T ss_pred CCCCCceEEEEecCCCEEeCCCccHHHHHHH-----HHHHcCCCCCHHHHHHHhccchHHHHHHhcccHHHHHHHHHHhC
Confidence 44 5689999999999999987 56777776 3444565432111000 0000000 0 0000111223
Q ss_pred CCCChhhHhh---h----hhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc-ceeEecc
Q 025190 69 YDIGADDYHG---F----VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICFE 137 (256)
Q Consensus 69 ~~~~~~~~~~---~----~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f-~~i~~~~ 137 (256)
...+.+.+.. . +... ......++||+.++++.|++.|+ ++|++....++..++.+|+..+| +.+++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 154 (267)
T 1swv_A 76 QLPTEADIQEMYEEFEEILFAI-LPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPD 154 (267)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHH-GGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHh-hccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCC
Confidence 3333332211 1 1111 12456789999999999998875 88999989999999999988886 8888888
Q ss_pred cCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----------
Q 025190 138 TMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP-RHALFLDDNIKNVTAGKALGLRTVLVGKTVN----------- 205 (256)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----------- 205 (256)
.... +||+|..+..+++++|+++ ++|++|||+.||+++|+.+|+.++++..+..
T Consensus 155 ~~~~--------------~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~ 220 (267)
T 1swv_A 155 DVPA--------------GRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVEN 220 (267)
T ss_dssp GSSC--------------CTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHH
T ss_pred ccCC--------------CCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhh
Confidence 7765 7999999999999999999 9999999999999999999999999987643
Q ss_pred ------------------CCCCCeeeCCcCchHHhHHHH
Q 025190 206 ------------------VGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 206 ------------------~~~~~~~~~~~~el~~~l~~~ 226 (256)
...|++++.++.+|.++|..+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~ 259 (267)
T 1swv_A 221 MDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHI 259 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred chhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHHHHH
Confidence 245999999999999988654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-27 Score=185.02 Aligned_cols=187 Identities=22% Similarity=0.293 Sum_probs=138.4
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhc
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHG 82 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (256)
+++|+|+||+||||+++...+. + .++..|.+...... ..+.......... ...+...+.+
T Consensus 4 ~~~k~iifDlDGTL~d~~~~~~----~-----~~~~~g~~~~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~~ 63 (205)
T 3m9l_A 4 SEIKHWVFDMDGTLTIAVHDFA----A-----IREALSIPAEDDIL---THLAALPADESAA--------KHAWLLEHER 63 (205)
T ss_dssp GGCCEEEECTBTTTEEEEECHH----H-----HHHHTTCCTTSCHH---HHHHHSCHHHHHH--------HHHHHHHTHH
T ss_pred ccCCEEEEeCCCcCcccHHHHH----H-----HHHHhCCCchHHHH---HHHhcCChHHHHH--------HHHHHHHHHH
Confidence 5689999999999999876544 2 34556765431110 1111111100000 0011111111
Q ss_pred CCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc--ceeEecccCCcccccCCCCCCCCCCCC
Q 025190 83 RLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKATRPDEFPVLLK 157 (256)
Q Consensus 83 ~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~K 157 (256)
.+ .....++||+.++|+.|+++|+ ++||+....++..++.+|+..+| +.+++++. +. +|
T Consensus 64 ~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~--------------~k 127 (205)
T 3m9l_A 64 DL-AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-AP--------------PK 127 (205)
T ss_dssp HH-EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SC--------------CT
T ss_pred HH-hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CC--------------CC
Confidence 11 2455789999999999999986 99999999999999999999999 77887665 43 89
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC--CCCCeeeCCcCchHHhHHH
Q 025190 158 PSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV--GEADYALENVNNLPQVVPE 225 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~--~~~~~~~~~~~el~~~l~~ 225 (256)
|++.++..+++++|+++++|++|||+.+|+++|+.+|+.++++.++... ..+++++.++.||...++.
T Consensus 128 p~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 128 PHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp TSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEECSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEeCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999876543 4599999999998877754
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-27 Score=185.56 Aligned_cols=200 Identities=22% Similarity=0.282 Sum_probs=140.1
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHH-HHc-CCCCChhh-----
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-RAL-GYDIGADD----- 75 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~----- 75 (256)
|++|+|+||+||||+|+...+..++.+ +.+.+|......... ....|...... ... ... ....
T Consensus 4 M~~k~v~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~-~~~~~~~~~ 73 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRGIVTCFRS-----VLERHGYTGITDDMI----KRTIGKTLEESFSILTGIT-DADQLESFR 73 (225)
T ss_dssp -CCSEEEECCBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHH----HTTTTSCHHHHHHHHHCCC-CHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCHHHHHHHHHH-----HHHHhCCCCCCHHHH----HHHhCCcHHHHHHHHcCCC-CHHHHHHHH
Confidence 457999999999999998777777766 445555542211111 11122211111 111 111 1111
Q ss_pred --HhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCC
Q 025190 76 --YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 76 --~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
+...+.+.. .....++|++.++++.|++.|+ ++|++....++..++.+++..+|+.++++++...
T Consensus 74 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 143 (225)
T 3d6j_A 74 QEYSKEADIYM-NANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTH--------- 143 (225)
T ss_dssp HHHHHHHHHHT-GGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSS---------
T ss_pred HHHHHHHHHhc-cccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCC---------
Confidence 111111111 2345788999999999998775 8899999999999999999999999999887765
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC------CCCCeeeCCcCchHHhHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV------GEADYALENVNNLPQVVP 224 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~------~~~~~~~~~~~el~~~l~ 224 (256)
.||++..+..+++++|++++++++|||+.+|+++++.+|++++++.++... ..+++++.++.+|.++|+
T Consensus 144 -----~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~ 218 (225)
T 3d6j_A 144 -----HKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPE 218 (225)
T ss_dssp -----CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC----
T ss_pred -----CCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhhh
Confidence 799999999999999999999999999999999999999999998765422 248999999999999887
Q ss_pred HHH
Q 025190 225 EIW 227 (256)
Q Consensus 225 ~~~ 227 (256)
.+.
T Consensus 219 ~~~ 221 (225)
T 3d6j_A 219 DKS 221 (225)
T ss_dssp ---
T ss_pred hhc
Confidence 654
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-26 Score=181.34 Aligned_cols=120 Identities=21% Similarity=0.311 Sum_probs=107.8
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
...++||+.+ |+.|+++ + ++||+....++..++.+|+..+|+.++++++.+. .||+|..+.
T Consensus 72 ~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------------~Kp~~~~~~ 135 (201)
T 2w43_A 72 NLKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKE--------------YKPSPKVYK 135 (201)
T ss_dssp TCEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC--------------CTTCHHHHH
T ss_pred ccccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCC--------------CCCCHHHHH
Confidence 4678999999 9999876 5 8999999999999999999999999999988776 799999999
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----CCCCCeeeCCcCchHHhHHH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----VGEADYALENVNNLPQVVPE 225 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~~~~~~~~~~el~~~l~~ 225 (256)
.+++++| +++|++|||+.+|+.+|+++|+++++++++.. ...+++++.++.+|.++|..
T Consensus 136 ~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 199 (201)
T 2w43_A 136 YFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWILR 199 (201)
T ss_dssp HHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHHH
T ss_pred HHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHHh
Confidence 9999999 89999999999999999999999999987532 24689999999999887754
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-25 Score=177.62 Aligned_cols=120 Identities=23% Similarity=0.377 Sum_probs=107.2
Q ss_pred CCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
....++||+.++|+.|+++.. ++||+... ++.+|+..+|+.++++++.+. +||+|.++.
T Consensus 102 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~--------------~kp~~~~~~ 162 (230)
T 3vay_A 102 HQVQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGI--------------GKPDPAPFL 162 (230)
T ss_dssp TCCCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTC--------------CTTSHHHHH
T ss_pred ccCccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHHHeeeeEEccccCC--------------CCcCHHHHH
Confidence 457899999999999998732 88988765 788999999999999988876 799999999
Q ss_pred HHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC----CCCCCeeeCCcCchHHhHHH
Q 025190 165 LALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN----VGEADYALENVNNLPQVVPE 225 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~----~~~~~~~~~~~~el~~~l~~ 225 (256)
.+++++|++|+++++|||+. +|+.+|+.+|+.++++.++.. ...|++++.++.+|.++|..
T Consensus 163 ~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 228 (230)
T 3vay_A 163 EALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLAR 228 (230)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHHHT
T ss_pred HHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHHHh
Confidence 99999999999999999998 999999999999999987643 45799999999999988864
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-25 Score=173.68 Aligned_cols=175 Identities=19% Similarity=0.322 Sum_probs=129.8
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh--h-hhH-HHHHHc----CCCCChhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY--G-STL-AGLRAL----GYDIGADD 75 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~-~~~~~~----~~~~~~~~ 75 (256)
++|+|+||+||||+|+... ..++.. ..+.+|.+..............+ + ... ..+... +.....+.
T Consensus 3 ~~k~viFDlDGTL~d~~~~-~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTNGWD-REQRAD-----VAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPED 76 (200)
T ss_dssp CCCEEEECCBTTTBCCSSC-HHHHHH-----HHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHHH
T ss_pred CceEEEEeCCCeeECCCcc-hHHHHH-----HHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHHH
Confidence 5799999999999998753 344544 55667776554433322222111 1 111 112211 11222333
Q ss_pred HhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCC
Q 025190 76 YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP 153 (256)
Q Consensus 76 ~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (256)
+...+ .....++||+.++|+.|+++|- ++||+....++..++.+|+..+|+.++++++.+.
T Consensus 77 ~~~~~-----~~~~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~------------ 139 (200)
T 3cnh_A 77 FRAVM-----EEQSQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGV------------ 139 (200)
T ss_dssp HHHHH-----HHTCCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSC------------
T ss_pred HHHHH-----HhcCccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCC------------
Confidence 33332 1234589999999999998764 9999999999999999999999999999988775
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
+||+|..+..+++++|+++++|++|||+.+|+++|+.+|+.+++++++
T Consensus 140 --~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 140 --MKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp --CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred --CCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 799999999999999999999999999999999999999999999764
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=181.29 Aligned_cols=117 Identities=10% Similarity=0.093 Sum_probs=102.5
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc---CcccccceeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
....++||+.++|+.|+++|+ |+||+....++..++++ |+.++|+.++++ +++ +||+|
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~---------------~KP~p 190 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG---------------HKVES 190 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC---------------CTTCH
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC---------------CCCCH
Confidence 456899999999999999886 89999999889988855 599999999987 554 59999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC------CCCCeeeCCcCch
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV------GEADYALENVNNL 219 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~------~~~~~~~~~~~el 219 (256)
..|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++... ..++++++++.+|
T Consensus 191 ~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el 255 (261)
T 1yns_A 191 ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 255 (261)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred HHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHh
Confidence 9999999999999999999999999999999999999999764322 2478888888776
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.3e-26 Score=179.05 Aligned_cols=194 Identities=18% Similarity=0.204 Sum_probs=141.3
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-----HHHHHcCCC-CChhhHh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-----AGLRALGYD-IGADDYH 77 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~ 77 (256)
++|+|+||+||||+++...+..++.. +.+.+|.+....... ....|... ......+.. .....+.
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRRNEL----PDTLGLRIDMVVDLWYARQPWNGPSRQEVV 78 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHH-----HHHHTTCCGGGGGGS----CCCTTCCHHHHHHHHHHHSCCSSSCHHHHH
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHH-----HHHHcCCCCChHHHH----HHHhCCCHHHHHHHHHHHcCCCccCHHHHH
Confidence 58999999999999998877777666 445556543311000 00011110 111112211 1222221
Q ss_pred hhh----hcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCC
Q 025190 78 GFV----HGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPD 150 (256)
Q Consensus 78 ~~~----~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~ 150 (256)
..+ .+.+ .....++|++.++++.|++.|+ ++|++....++..++.+++..+|+.++++++.+.
T Consensus 79 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--------- 148 (226)
T 1te2_A 79 ERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY--------- 148 (226)
T ss_dssp HHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC---------
T ss_pred HHHHHHHHHHH-hccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCC---------
Confidence 111 1111 2345788999999999998875 8999999999999999999999999999888775
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----CCCCCeeeCCcCchHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----VGEADYALENVNNLPQ 221 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~~~~~~~~~~el~~ 221 (256)
.||++..+.++++++|++++++++|||+.+|+++++.+|+++++++++.. ...|++++.++.||.+
T Consensus 149 -----~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 149 -----SKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTA 219 (226)
T ss_dssp -----CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred -----CCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhH
Confidence 79999999999999999999999999999999999999999999877642 3569999999988765
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-25 Score=172.58 Aligned_cols=131 Identities=13% Similarity=0.227 Sum_probs=113.1
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCCh---HHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDR---NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~---~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
....++||+.++|+.|+++|+ ++||+.. ..++..++.+|+..+|+.++++++... ....+||+|
T Consensus 31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~----------~~~~~KP~p 100 (189)
T 3ib6_A 31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQ----------PGKMEKPDK 100 (189)
T ss_dssp TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSS----------TTCCCTTSH
T ss_pred CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccccc----------ccCCCCcCH
Confidence 457899999999999999986 9999877 889999999999999999999887510 001279999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCC-ccccHHHHHcCCeEEEEcCCCCC--------CCCCeeeC--CcCchHHhHHHHH
Q 025190 161 DAMKLALHVANVDPRHALFLDDN-IKNVTAGKALGLRTVLVGKTVNV--------GEADYALE--NVNNLPQVVPEIW 227 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~G~~~v~v~~~~~~--------~~~~~~~~--~~~el~~~l~~~~ 227 (256)
..|..+++++|+++++|++|||+ .+|+.+|+++|+.++++.++... ..|+++++ ++.+|.++|.-.-
T Consensus 101 ~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~ 178 (189)
T 3ib6_A 101 TIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLK 178 (189)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHH
Confidence 99999999999999999999999 69999999999999999865431 27899999 9999999885543
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-26 Score=181.70 Aligned_cols=190 Identities=21% Similarity=0.269 Sum_probs=136.6
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHhhhhH-----HHHHHcCCCCChhhHhh
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFS-ETKASSLRVELFKAYGSTL-----AGLRALGYDIGADDYHG 78 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 78 (256)
+|+|+||+||||+|+...+..++.+ +.+.+|.. ...... ....|... ..+...+...+.+.+..
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKA-----LAEEIGINGVDRQFN-----EQLKGVSREDSLQKILDLADKKVSAEEFKE 71 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHH-----HHHHTTCCCCSHHHH-----TTTTTCCHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHH-----HHHHcCCCCCCHHHH-----HHhCCCCHHHHHHHHHHHhCCCCChHHHHH
Confidence 6899999999999998877777766 34455654 221110 00111111 11222332333332211
Q ss_pred -------hhhcCCC-CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCC
Q 025190 79 -------FVHGRLP-YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKAT 147 (256)
Q Consensus 79 -------~~~~~~~-~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~ 147 (256)
.+..... .....++||+.++++.|++.|+ ++|+. ...+..++.+++..+|+.++++++.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~------ 143 (221)
T 2wf7_A 72 LAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAA------ 143 (221)
T ss_dssp HHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSS------
T ss_pred HHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCC------
Confidence 1111110 1245788999999999999876 77777 556778999999999999999888775
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchH
Q 025190 148 RPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLP 220 (256)
Q Consensus 148 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~ 220 (256)
.||+|..+..+++++|+++++|++|||+.+|+++|+.+|+.+++++....-..+++++.++.++.
T Consensus 144 --------~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~a~~v~~~~~el~ 208 (221)
T 2wf7_A 144 --------SKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYT 208 (221)
T ss_dssp --------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGGGCC
T ss_pred --------CCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhccccchhcCHHhCC
Confidence 79999999999999999999999999999999999999999999976432237999999999963
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=172.71 Aligned_cols=175 Identities=18% Similarity=0.245 Sum_probs=127.7
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHH---HHHHHHh--hh-h-----HHHHHHcCCCC
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLR---VELFKAY--GS-T-----LAGLRALGYDI 71 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~-~-----~~~~~~~~~~~ 71 (256)
+++|+|+||+||||+++.. ..+.+ ....+|.+........ ...+..+ |. . .......+...
T Consensus 26 ~~ik~viFD~DGTL~d~~~---~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 97 (229)
T 4dcc_A 26 KGIKNLLIDLGGVLINLDR---ERCIE-----NFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMV 97 (229)
T ss_dssp CCCCEEEECSBTTTBCBCH---HHHHH-----HHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEeCCCeEEeCCh---HHHHH-----HHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCC
Confidence 3589999999999999763 23333 3345666422221110 0011111 10 0 11122335556
Q ss_pred ChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHH------HhcCcccccceeEecccCCcc
Q 025190 72 GADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCL------KRLEIADCFDQIICFETMNPN 142 (256)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l------~~~gl~~~f~~i~~~~~~~~~ 142 (256)
..+.+...+.... ..++||+.++|+.|+++ + ++||+....++.++ +.+|+..+|+.++++++.+.
T Consensus 98 ~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~- 171 (229)
T 4dcc_A 98 SDKQIDAAWNSFL----VDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKM- 171 (229)
T ss_dssp CHHHHHHHHHTTB----CCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTC-
T ss_pred CHHHHHHHHHHHH----HhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCC-
Confidence 6666666655432 24679999999999988 5 99999999888555 77899999999999998886
Q ss_pred cccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 143 LSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 143 ~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
+||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.+++++.+.
T Consensus 172 -------------~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 172 -------------AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp -------------CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred -------------CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence 8999999999999999999999999999999999999999999998764
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-25 Score=172.28 Aligned_cols=123 Identities=15% Similarity=0.161 Sum_probs=104.1
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....++||+.++|+.|+++|+ ++|+.....+...+ + .+|+.++++++... +||+|.+|
T Consensus 33 ~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d~v~~~~~~~~--------------~KP~p~~~ 93 (196)
T 2oda_A 33 EHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVNDWMIAAPRPTA--------------GWPQPDAC 93 (196)
T ss_dssp GGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTTTCEECCCCSS--------------CTTSTHHH
T ss_pred ccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCCEEEECCcCCC--------------CCCChHHH
Confidence 345789999999999999886 88888777664433 3 46899999888775 79999999
Q ss_pred HHHHHHcCCCC-CcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----------------------------CCCCCeee
Q 025190 164 KLALHVANVDP-RHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----------------------------VGEADYAL 213 (256)
Q Consensus 164 ~~~~~~~~~~~-~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----------------------------~~~~~~~~ 213 (256)
..+++++++.+ ++|++|||+.+|+.+|+++|+.+|++.++.. ...|++++
T Consensus 94 ~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi 173 (196)
T 2oda_A 94 WMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVI 173 (196)
T ss_dssp HHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEe
Confidence 99999999975 8999999999999999999999999987643 24699999
Q ss_pred CCcCchHHhHHHHHh
Q 025190 214 ENVNNLPQVVPEIWV 228 (256)
Q Consensus 214 ~~~~el~~~l~~~~~ 228 (256)
+++.+|.++|..+..
T Consensus 174 ~~~~eL~~~l~~~~~ 188 (196)
T 2oda_A 174 DHLGELESCLADIAL 188 (196)
T ss_dssp SSGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999998876543
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-25 Score=183.97 Aligned_cols=189 Identities=18% Similarity=0.201 Sum_probs=137.0
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHhhhhHH-HHHHcCCC-CChhhH---hh
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCG-FSETKASSLRVELFKAYGSTLA-GLRALGYD-IGADDY---HG 78 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~---~~ 78 (256)
+|+|+||+||||+|+...+..++.+ +.+.+| .+.... .....|.... .+..+... ...+.. ..
T Consensus 35 ik~iifDlDGTLlds~~~~~~~~~~-----~~~~~g~~~~~~~------~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (275)
T 2qlt_A 35 INAALFDVDGTIIISQPAIAAFWRD-----FGKDKPYFDAEHV------IHISHGWRTYDAIAKFAPDFADEEYVNKLEG 103 (275)
T ss_dssp ESEEEECCBTTTEECHHHHHHHHHH-----HHTTCTTCCHHHH------HHHCTTCCHHHHHHHHCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHH-----HHHHcCCCCHHHH------HHHhcCCCHHHHHHHHhccCCcHHHHHHHHH
Confidence 6899999999999998877777765 445555 322111 0111122111 11111111 111111 11
Q ss_pred hhhcCCCCCCCCCChhHHHHHHhhhcC-cE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 79 FVHGRLPYDLIKPDPQLRNLLCSITQR-KI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 79 ~~~~~~~~~~~~~~pg~~~~l~~l~~~-~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
.+.+.+ .....++||+.++|+.|++. |+ ++|++....++..++.+++. .|+.++++++...
T Consensus 104 ~~~~~~-~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~------------- 168 (275)
T 2qlt_A 104 EIPEKY-GEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQ------------- 168 (275)
T ss_dssp THHHHH-CTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSS-------------
T ss_pred HHHHHH-hcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCC-------------
Confidence 111111 34567899999999999988 75 89999999999999999986 4888888887765
Q ss_pred CCCCCHHHHHHHHHHcCC-------CCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----CCCCCeeeCCcCchH
Q 025190 155 LLKPSMDAMKLALHVANV-------DPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----VGEADYALENVNNLP 220 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~-------~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~~~~~~~~~~el~ 220 (256)
+||+|..+..+++++|+ ++++|++|||+.+|+++|+.+|+.++++..+.. ...|++++.++.+|.
T Consensus 169 -~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~ 245 (275)
T 2qlt_A 169 -GKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIR 245 (275)
T ss_dssp -CTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEE
T ss_pred -CCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcC
Confidence 79999999999999999 999999999999999999999999999987642 346899999998875
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-25 Score=174.27 Aligned_cols=132 Identities=11% Similarity=0.136 Sum_probs=105.6
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
...++||+.++|+.|+++|+ ++||+....++..++.+|+..+|+.+++.++.... + ..+.....+||||..++
T Consensus 73 ~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~---~-~~~~~~~~~k~k~~~~~ 148 (217)
T 3m1y_A 73 SLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALN---G-LVTGHMMFSHSKGEMLL 148 (217)
T ss_dssp TCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE---E-EEEESCCSTTHHHHHHH
T ss_pred cCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEE---e-eeccCCCCCCChHHHHH
Confidence 36799999999999999987 99999999999999999999999988755441100 0 00112334899999999
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVP 224 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~ 224 (256)
.+++++|+++++|++|||+.+|+.+|+.+|+++++......+..|++++++. +|.++++
T Consensus 149 ~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~l~~~ad~v~~~~-dl~~~~~ 207 (217)
T 3m1y_A 149 VLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAFNAKEVLKQHATHCINEP-DLALIKP 207 (217)
T ss_dssp HHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEESCCHHHHTTCSEEECSS-BGGGGTT
T ss_pred HHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEECccHHHHHhcceeeccc-CHHHHHH
Confidence 9999999999999999999999999999999998833333456799998754 6666553
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=165.62 Aligned_cols=172 Identities=19% Similarity=0.217 Sum_probs=123.2
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHH-HHcCCCCC-hhhHhhhhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL-RALGYDIG-ADDYHGFVH 81 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~ 81 (256)
++|+|+||+||||+|+...+..++.+ +.+++|......... .. .. +.....+ ........ ...+...+.
T Consensus 5 ~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~-~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (190)
T 2fi1_A 5 KYHDYIWDLGGTLLDNYETSTAAFVE-----TLALYGITQDHDSVY-QA-LK--VSTPFAIETFAPNLENFLEKYKENEA 75 (190)
T ss_dssp CCSEEEECTBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHHH-HH-HH--HCHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred cccEEEEeCCCCcCCCHHHHHHHHHH-----HHHHhCCCCCHHHHH-HH-Hc--cccHHHHHHHhhhHHHHHHHHHHHHH
Confidence 48999999999999988777777776 445567653322111 11 10 1111111 11111111 112222222
Q ss_pred cCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCC
Q 025190 82 GRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP 158 (256)
Q Consensus 82 ~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp 158 (256)
+.. ....++||+.++++.|+++|+ ++||.. ..++..++.+|+..+|+.++++++... +||
T Consensus 76 ~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~~f~~~~~~~~~~~--------------~kp 138 (190)
T 2fi1_A 76 REL--EHPILFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAAYFTEVVTSSSGFK--------------RKP 138 (190)
T ss_dssp HHT--TSCCBCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGGGEEEEECGGGCCC--------------CTT
T ss_pred Hhc--CcCccCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHhheeeeeeccccCC--------------CCC
Confidence 222 223389999999999999876 788775 468889999999999999999888765 799
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
++..+..+++++|++ +|++|||+.+|+++|+.+|+++++++++
T Consensus 139 ~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~ 181 (190)
T 2fi1_A 139 NPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSI 181 (190)
T ss_dssp SCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred CHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCC
Confidence 999999999999998 9999999999999999999999999764
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=169.23 Aligned_cols=115 Identities=16% Similarity=0.227 Sum_probs=94.4
Q ss_pred CCCCChhHHHHHHhhhcCcE-EEecCChHHHHHHHHhc-----------CcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRL-----------EIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~-ivs~~~~~~~~~~l~~~-----------gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
...++||+.++|+. ...+ ++||+....++..+++. ++.++|+.++.+...+
T Consensus 123 ~~~~~pgv~e~L~~--g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g--------------- 185 (253)
T 2g80_A 123 KAPVYADAIDFIKR--KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG--------------- 185 (253)
T ss_dssp CBCCCHHHHHHHHH--CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC---------------
T ss_pred cCCCCCCHHHHHHc--CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeeccC---------------
Confidence 46899999999999 2223 99999999999999876 4777788777652113
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC----CCCCeeeCCcCch
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV----GEADYALENVNNL 219 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~----~~~~~~~~~~~el 219 (256)
.||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++++.+.... ..++.++.++.+|
T Consensus 186 ~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 186 KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 599999999999999999999999999999999999999999999763221 2277888888764
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-24 Score=168.89 Aligned_cols=173 Identities=19% Similarity=0.252 Sum_probs=123.8
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH----HHHH--hhh--h----HHHHHHcCCC
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVE----LFKA--YGS--T----LAGLRALGYD 70 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~--~----~~~~~~~~~~ 70 (256)
+|+|+|+||+||||+|+...+. .. ....+|.+.... ..... .... .|. . ......++..
T Consensus 3 ~m~k~iiFDlDGTL~d~~~~~~---~~-----~~~~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 73 (211)
T 2i6x_A 3 AMIRNIVFDLGGVLIHLNREES---IR-----RFKAIGVADIEE-MLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKE 73 (211)
T ss_dssp CCCSEEEECSBTTTEEECHHHH---HH-----HHHHTTCTTHHH-HTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSC
T ss_pred ccceEEEEeCCCeeEecchHHH---HH-----HHHHhCCchHHH-HHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCC
Confidence 4579999999999999876533 22 334455543211 00000 0000 010 0 0111222333
Q ss_pred CChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHh------cCcccccceeEecccCCc
Q 025190 71 IGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR------LEIADCFDQIICFETMNP 141 (256)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~------~gl~~~f~~i~~~~~~~~ 141 (256)
.+.+.+...+.. ....++||+.++|+.|++ |+ ++||+....++..++. +|+..+|+.++++++.+.
T Consensus 74 ~~~~~~~~~~~~----~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~ 148 (211)
T 2i6x_A 74 LTYQQVYDALLG----FLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGK 148 (211)
T ss_dssp CCHHHHHHHHGG----GEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTC
T ss_pred CCHHHHHHHHHH----hhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCC
Confidence 334444333321 234688999999999998 75 9999999999999998 899999999999988776
Q ss_pred ccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 142 NLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
+||+|..+..+++++|++|++|++|||+.+|+.+|+.+|+.+++++.+
T Consensus 149 --------------~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 149 --------------YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp --------------CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred --------------CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 799999999999999999999999999999999999999999998765
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=173.54 Aligned_cols=197 Identities=17% Similarity=0.151 Sum_probs=136.4
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHhhhh--HHHHHH----cCCCCChhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKAS-SLRVELFKAYGST--LAGLRA----LGYDIGADD 75 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~ 75 (256)
.++|+|+||+||||+|+...+..++.. ++..+|.+..... .....+....|.. ...+.. .......+.
T Consensus 9 ~~~k~viFDlDGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHVLADLRAH-----MMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRDTRLLL 83 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHHHHHHHHH-----HHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTCTGGGG
T ss_pred CCCeEEEEcCCCCCEecHHHHHHHHHH-----HHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccchHHHH
Confidence 457899999999999999888888877 4445565432210 0011111112211 111111 111112223
Q ss_pred HhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCC
Q 025190 76 YHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFP 153 (256)
Q Consensus 76 ~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~ 153 (256)
+...+... .....++||+.++|+.|+++|. ++||+....++..++.+|+.++|+.++..
T Consensus 84 ~~~~~~~~--~~~~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~----------------- 144 (231)
T 2p11_A 84 MSSFLIDY--PFASRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWDEVEGRVLI----------------- 144 (231)
T ss_dssp GHHHHHHC--CGGGGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHHHTTTCEEE-----------------
T ss_pred HHHHHHHH--HHhCCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEe-----------------
Confidence 33333322 2456899999999999998863 99999999999999999999999876542
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCcc---ccHHHHHcCCeEEEEcCCCC--C------C-CCCeeeCCcCchHH
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNIK---NVTAGKALGLRTVLVGKTVN--V------G-EADYALENVNNLPQ 221 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~---Di~~a~~~G~~~v~v~~~~~--~------~-~~~~~~~~~~el~~ 221 (256)
.++|+..++.+++ +++|++|++|||+.+ |+.+|+++|+.++++.++.. . . .+++++.++.+|.+
T Consensus 145 --~~~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~ 220 (231)
T 2p11_A 145 --YIHKELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVE 220 (231)
T ss_dssp --ESSGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGG
T ss_pred --cCChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHH
Confidence 2344577777776 799999999999999 99999999999999987632 1 2 48999999999998
Q ss_pred hHHHHH
Q 025190 222 VVPEIW 227 (256)
Q Consensus 222 ~l~~~~ 227 (256)
+|..++
T Consensus 221 ~l~~~~ 226 (231)
T 2p11_A 221 MDAEWL 226 (231)
T ss_dssp CGGGGC
T ss_pred HHHHHH
Confidence 886544
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.90 E-value=4e-24 Score=163.80 Aligned_cols=121 Identities=16% Similarity=0.133 Sum_probs=102.8
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCCh---------------HHHHHHHHhcCcccccceeEe-----cccCCcccc
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIIC-----FETMNPNLS 144 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~---------------~~~~~~l~~~gl~~~f~~i~~-----~~~~~~~~~ 144 (256)
...++||+.++|+.|+++|+ ++||+.. ..++..++.+| .+|+.++. +++.+.
T Consensus 25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~--- 99 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCAC--- 99 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSS---
T ss_pred HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCC---
Confidence 45789999999999999987 9999986 67788888888 44555552 344443
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC--------CCCCCeeeCCc
Q 025190 145 KATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN--------VGEADYALENV 216 (256)
Q Consensus 145 ~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~--------~~~~~~~~~~~ 216 (256)
+||+|.+|.++++++|++|+++++|||+.+|+.+|+++|+.++++.++.. ...|+++++++
T Consensus 100 -----------~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l 168 (179)
T 3l8h_A 100 -----------RKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDL 168 (179)
T ss_dssp -----------STTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSH
T ss_pred -----------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCH
Confidence 89999999999999999999999999999999999999999999987641 36789999999
Q ss_pred CchHHhHH
Q 025190 217 NNLPQVVP 224 (256)
Q Consensus 217 ~el~~~l~ 224 (256)
.||.++|.
T Consensus 169 ~el~~~l~ 176 (179)
T 3l8h_A 169 AAVAEQLL 176 (179)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988774
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=164.50 Aligned_cols=134 Identities=16% Similarity=0.191 Sum_probs=105.5
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCC---------------hHHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSD---------------RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~---------------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
...++||+.++|+.|+++|+ ++||+. ...++..++.+|+. |+.++.+........+ ..
T Consensus 48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~--~~ 123 (211)
T 2gmw_A 48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVE--EF 123 (211)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSG--GG
T ss_pred cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCccc--cc
Confidence 45789999999999999986 899998 47888899999987 7776643221000000 00
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeE-EEEcCCCCC-----CCCCeeeCCcCchHHhH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRT-VLVGKTVNV-----GEADYALENVNNLPQVV 223 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~-v~v~~~~~~-----~~~~~~~~~~~el~~~l 223 (256)
.+....+||+|.+|..++++++++++++++|||+.+|+.+|+++|+.+ +++.++... ..|++++.++.+|.++|
T Consensus 124 ~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 124 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 112335899999999999999999999999999999999999999999 999876532 34899999999998877
Q ss_pred HH
Q 025190 224 PE 225 (256)
Q Consensus 224 ~~ 225 (256)
..
T Consensus 204 ~~ 205 (211)
T 2gmw_A 204 KK 205 (211)
T ss_dssp HC
T ss_pred Hh
Confidence 54
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.7e-24 Score=168.57 Aligned_cols=192 Identities=14% Similarity=0.212 Sum_probs=125.5
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-hh--hhH-HHHHHcCCCCChhhHhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKA-YG--STL-AGLRALGYDIGADDYHG 78 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~-~~~~~~~~~~~~~~~~~ 78 (256)
+++|+|+||+||||+|+.. +.. +++.+|.+......... +... .. ... ...... ....+.+.+
T Consensus 12 ~~~k~viFD~DGTLvd~~~-----~~~-----~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 78 (225)
T 1nnl_A 12 YSADAVCFDVDSTVIREEG-----IDE-----LAKICGVEDAVSEMTRR-AMGGAVPFKAALTERLALI--QPSREQVQR 78 (225)
T ss_dssp HHCSEEEEETBTTTBSSCH-----HHH-----HHHHTTCTTTC-------------CHHHHHHHHHHHH--CCCHHHHHH
T ss_pred hhCCEEEEeCccccccccc-----HHH-----HHHHhCCcHHHHHHHHH-HHcCCccHHHHHHHHHHHh--cCCHHHHHH
Confidence 4579999999999999864 222 44556654221111100 0000 00 000 001111 122333433
Q ss_pred hhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc--cccceeE--------ecccCCccccc
Q 025190 79 FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA--DCFDQII--------CFETMNPNLSK 145 (256)
Q Consensus 79 ~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~--~~f~~i~--------~~~~~~~~~~~ 145 (256)
.+.. ....++||+.++|+.|+++|+ ++||+....++..++++|+. ++|+.++ ++.+...
T Consensus 79 ~~~~----~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~---- 150 (225)
T 1nnl_A 79 LIAE----QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQ---- 150 (225)
T ss_dssp HHHH----SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTS----
T ss_pred HHHh----ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCC----
Confidence 3322 246799999999999999986 99999999999999999997 3777654 3322211
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC----CCCCeeeCCcCchHH
Q 025190 146 ATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV----GEADYALENVNNLPQ 221 (256)
Q Consensus 146 ~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~----~~~~~~~~~~~el~~ 221 (256)
..+..||||..+..+++++|+ ++|++|||+.+|+.+|+++|+ +++++..... ..+++++.++.+|.+
T Consensus 151 ------~~~~~~~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (225)
T 1nnl_A 151 ------PTAESGGKGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLG 221 (225)
T ss_dssp ------GGGSTTHHHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC
T ss_pred ------cccCCCchHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHH
Confidence 111246788999999999998 789999999999999999999 7877654221 358999999999887
Q ss_pred hHH
Q 025190 222 VVP 224 (256)
Q Consensus 222 ~l~ 224 (256)
+|.
T Consensus 222 ~l~ 224 (225)
T 1nnl_A 222 ELE 224 (225)
T ss_dssp ---
T ss_pred HHh
Confidence 663
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-24 Score=167.26 Aligned_cols=101 Identities=22% Similarity=0.418 Sum_probs=92.1
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHh-cCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKR-LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
..++||+.++|+.|+++|+ ++||+....++..++. +|+..+|+.++++++.+. .||+|..+.
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~--------------~Kp~~~~~~ 155 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGM--------------RKPEARIYQ 155 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTC--------------CTTCHHHHH
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCC--------------CCCCHHHHH
Confidence 5789999999999998886 8999988877777776 788899999999988776 799999999
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
.+++++|++++++++|||+.+|+.+|+.+|+.+++++.+
T Consensus 156 ~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 194 (206)
T 2b0c_A 156 HVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK 194 (206)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred HHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCC
Confidence 999999999999999999999999999999999999765
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.9e-23 Score=171.99 Aligned_cols=200 Identities=11% Similarity=0.085 Sum_probs=131.3
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh---hhhHHHHHHcCCCCChhhHhhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY---GSTLAGLRALGYDIGADDYHGF 79 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 79 (256)
+++|+|+||+||||+++... .. +...+|...... .....+.... ................+.+...
T Consensus 106 ~~~kaviFDlDGTLid~~~~-----~~-----la~~~g~~~~~~-~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i~~~ 174 (317)
T 4eze_A 106 PANGIIAFDMDSTFIAEEGV-----DE-----IARELGMSTQIT-AITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAV 174 (317)
T ss_dssp CCSCEEEECTBTTTBSSCHH-----HH-----HHHHTTCHHHHH-HHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHH
T ss_pred CCCCEEEEcCCCCccCCccH-----HH-----HHHHhCCcHHHH-HHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHH
Confidence 57799999999999998753 21 344556543221 1111111110 0001111111112333333333
Q ss_pred hhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCC
Q 025190 80 VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 80 ~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
. ..+.++||+.++|+.|+++|+ ++||+....++.+++.+|+..+|+.++..++... .+ ..+.....+
T Consensus 175 ~------~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~---tg-~i~~~~~~~ 244 (317)
T 4eze_A 175 C------DRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVL---TD-NITLPIMNA 244 (317)
T ss_dssp H------HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEE---EE-EECSSCCCH
T ss_pred H------hCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCee---ee-eEecccCCC
Confidence 2 345799999999999999987 9999999999999999999999988776543210 00 011223346
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeee--CCcCchHHhH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~--~~~~el~~~l 223 (256)
||+|..+..+++++|++++++++|||+.+|+.+|+.+|+++++.........++.++ .++.++..+|
T Consensus 245 kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~~~~~~~~~a~~~i~~~~L~~ll~~L 313 (317)
T 4eze_A 245 ANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWKAKPVVREKIHHQINYHGFELLLFLI 313 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHHHCCEEESSSCGGGGGGGT
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeCCCHHHHHhcCeeeCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999888832222223345443 4666665554
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-23 Score=161.02 Aligned_cols=190 Identities=10% Similarity=0.071 Sum_probs=130.4
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHH-----HHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhh
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSET-----KASSLRVELFKAYGSTLAGLRALGYDIGADDYHGF 79 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (256)
+|+|+||+||||+| .++.. +++.+|.+.. ... .+....+.....+... ..+.+.+.+.
T Consensus 2 ~k~viFD~DGTL~d------~~~~~-----~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~ 64 (206)
T 1rku_A 2 MEIACLDLEGVLVP------EIWIA-----FAEKTGIDALKATTRDIP----DYDVLMKQRLRILDEH--GLKLGDIQEV 64 (206)
T ss_dssp CEEEEEESBTTTBC------CHHHH-----HHHHHTCGGGGCCTTTCC----CHHHHHHHHHHHHHHT--TCCHHHHHHH
T ss_pred CcEEEEccCCcchh------hHHHH-----HHHHcCChHHHHHhcCcC----CHHHHHHHHHHHHHHC--CCCHHHHHHH
Confidence 68999999999999 23444 4455665421 000 0011112112222221 2234444432
Q ss_pred hhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc-ceeEecccCCcccccCCCCCCCCCC
Q 025190 80 VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 80 ~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f-~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
+ ....++||+.++|+.|+++ + ++||+....++..++++|+..+| +.++++++.... ..
T Consensus 65 ~------~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~-----------~~ 126 (206)
T 1rku_A 65 I------ATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV-----------GY 126 (206)
T ss_dssp H------TTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEE-----------EE
T ss_pred H------HhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEE-----------ee
Confidence 2 3567899999999999987 5 99999999999999999999999 566665544210 00
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-CCCCCCee-eCCcCchHHhHHHHHhc
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-NVGEADYA-LENVNNLPQVVPEIWVS 229 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-~~~~~~~~-~~~~~el~~~l~~~~~~ 229 (256)
-||+|..+..+++++++++++|++|||+.+|+.+|+.+|+++++..... ....++++ ++++.++.++|..+++.
T Consensus 127 ~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 202 (206)
T 1rku_A 127 QLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSR 202 (206)
T ss_dssp ECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEECSHHHHHHHHHHHCSS
T ss_pred ecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhccccchHHHHHHHHHHhcc
Confidence 1488899999999999999999999999999999999999977532211 12346664 89999999888776543
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.4e-22 Score=155.48 Aligned_cols=131 Identities=10% Similarity=0.167 Sum_probs=97.0
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
..+.|++.++++.|+++|+ ++|++....++..++.+++..+|+.++...+.. +.+.. .......++|+..+..
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~K~~~l~~ 150 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK---LTGDV-EGEVLKENAKGEILEK 150 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE---EEEEE-ECSSCSTTHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCE---EcCCc-ccCccCCccHHHHHHH
Confidence 4567999999999999987 889888888888899999877776544322100 00000 0001125677899999
Q ss_pred HHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCC--cCchHHhH
Q 025190 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALEN--VNNLPQVV 223 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~--~~el~~~l 223 (256)
+++++|+++++|++|||+.||+++++.+|+.+++......+..+++++.+ +.+|.+++
T Consensus 151 ~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~~~~~~~~~a~~v~~~~~~~~l~~~l 210 (211)
T 1l7m_A 151 IAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKADICIEKRDLREILKYI 210 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEESCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred HHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEECCCHHHHhhcceeecchhHHHHHHhh
Confidence 99999999999999999999999999999986544332334568999988 88876653
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-24 Score=175.13 Aligned_cols=121 Identities=15% Similarity=0.069 Sum_probs=99.8
Q ss_pred CCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccc---eeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFD---QIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~---~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
.++|++.++++.|+ .|+ ++||.........+...++..+|+ .+++++.... +||+|.++.
T Consensus 122 ~~~~~~~~~l~~l~-~~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~Kp~~~~~~ 186 (259)
T 2ho4_A 122 FHYQLLNQAFRLLL-DGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVV--------------GKPEKTFFL 186 (259)
T ss_dssp CBHHHHHHHHHHHH-TTCCEEESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEEC--------------STTSHHHHH
T ss_pred CCHHHHHHHHHHHH-CCCEEEEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEe--------------cCCCHHHHH
Confidence 47899999999999 665 788877665555667778877776 4555555544 799999999
Q ss_pred HHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC--------CCCCCeeeCCcCchHHhHHH
Q 025190 165 LALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN--------VGEADYALENVNNLPQVVPE 225 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~~~~~~~~~~el~~~l~~ 225 (256)
.+++++|+++++|++|||+. +|+.+|+.+|+.++++.++.. ...|+++++++.++.++|..
T Consensus 187 ~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~ 256 (259)
T 2ho4_A 187 EALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHILQ 256 (259)
T ss_dssp HHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHHHH
T ss_pred HHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHHHH
Confidence 99999999999999999999 999999999999999987631 35699999999999887754
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-23 Score=167.46 Aligned_cols=119 Identities=16% Similarity=0.179 Sum_probs=94.2
Q ss_pred CCCCCChhHHHHHHhhhcCcE--EEecCChHH--HHH-HHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI--IFTNSDRNH--AIT-CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~--~~~-~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
....++||+.++++.|+ +|+ ++||+.... ... .++..++..+|+.++++++.+. +||+|.
T Consensus 123 ~~~~~~~~~~~~l~~l~-~g~~~i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~--------------~KP~p~ 187 (264)
T 1yv9_A 123 DTELSYEKVVLATLAIQ-KGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYI--------------GKPKAI 187 (264)
T ss_dssp CTTCCHHHHHHHHHHHH-TTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEC--------------STTSHH
T ss_pred CCCcCHHHHHHHHHHHh-CCCEEEEECCCCcccCCCCcccCCcHHHHHHHHHhCCCcccc--------------CCCCHH
Confidence 34578999999999997 666 788876532 111 2233446677888887776554 799999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC--------CCCCeeeCCcCchH
Q 025190 162 AMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV--------GEADYALENVNNLP 220 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~--------~~~~~~~~~~~el~ 220 (256)
+|..+++++|++|++|++|||++ +|+.+|+++|+.++++.++... ..|+++++++.++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~ 255 (264)
T 1yv9_A 188 IMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 255 (264)
T ss_dssp HHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred HHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence 99999999999999999999995 9999999999999999865421 16999999988764
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-23 Score=165.29 Aligned_cols=130 Identities=13% Similarity=0.134 Sum_probs=99.8
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCC-CCCCCCCHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEF-PVLLKPSMDA 162 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~-~~~~Kp~~~~ 162 (256)
....++||+.++|+.|+++|+ ++||+....++..++ |+..+ +.+++++..... ... ....||+|..
T Consensus 74 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~-------~~~~~~~~kp~p~~ 143 (236)
T 2fea_A 74 EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDN-------DYIHIDWPHSCKGT 143 (236)
T ss_dssp HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSS-------SBCEEECTTCCCTT
T ss_pred cCCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcC-------CceEEecCCCCccc
Confidence 346899999999999999886 999999999998888 77666 888887765420 000 0015788774
Q ss_pred -HH-------HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCC-CCCeeeCCcCchHHhHHHH
Q 025190 163 -MK-------LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVG-EADYALENVNNLPQVVPEI 226 (256)
Q Consensus 163 -~~-------~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~-~~~~~~~~~~el~~~l~~~ 226 (256)
+. .++++++++++++++|||+.+|+.+|+.+|+.++..+... ... .+++++.++.+|.++|..+
T Consensus 144 ~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 218 (236)
T 2fea_A 144 CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENV 218 (236)
T ss_dssp CCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTS
T ss_pred cccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeecCCHHHHHHHHHHh
Confidence 44 8899999999999999999999999999999987422111 123 3889999999998887654
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.8e-24 Score=170.73 Aligned_cols=196 Identities=16% Similarity=0.152 Sum_probs=117.8
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhH------h
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDY------H 77 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 77 (256)
++|+|+||+||||+++...+..+ .++++ .+++.|++........ ..........+...+.......+ .
T Consensus 2 ~~k~i~fDlDGTLl~~~~~~~~~-~~~~~--~l~~~g~~~~~~t~~~---g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 75 (250)
T 2c4n_A 2 TIKNVICDIDGVLMHDNVAVPGA-AEFLH--GIMDKGLPLVLLTNYP---SQTGQDLANRFATAGVDVPDSVFYTSAMAT 75 (250)
T ss_dssp CCCEEEEECBTTTEETTEECTTH-HHHHH--HHHHTTCCEEEEESCC---SCCHHHHHHHHHHTTCCCCGGGEEEHHHHH
T ss_pred CccEEEEcCcceEEeCCEeCcCH-HHHHH--HHHHcCCcEEEEECCC---CCCHHHHHHHHHHcCCCCCHHHeEcHHHHH
Confidence 47999999999999998776655 33333 2345565432110000 00000001112223332222211 1
Q ss_pred hhhhcCCCCCCCCCChhHHHHHHhhhcCcE-EE-----------------------------------ecCChHHHHHHH
Q 025190 78 GFVHGRLPYDLIKPDPQLRNLLCSITQRKI-IF-----------------------------------TNSDRNHAITCL 121 (256)
Q Consensus 78 ~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~-iv-----------------------------------s~~~~~~~~~~l 121 (256)
..+.+.+ .....++||+.++++.+++.|+ +. |+.. ......+
T Consensus 76 ~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~ 153 (250)
T 2c4n_A 76 ADFLRRQ-EGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFY 153 (250)
T ss_dssp HHHHHTS-SCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTC
T ss_pred HHHHHhc-CCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCee
Confidence 1111211 3455678999999999998876 22 2222 1111112
Q ss_pred HhcC-cccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccccHHHHHcCCeEEE
Q 025190 122 KRLE-IADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDN-IKNVTAGKALGLRTVL 199 (256)
Q Consensus 122 ~~~g-l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~G~~~v~ 199 (256)
+.+| +..+|+.+.+.+. ...+||++.+++.+++++|+++++|++|||+ .||+++++.+|+++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~--------------~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~ 219 (250)
T 2c4n_A 154 PACGALCAGIEKISGRKP--------------FYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETIL 219 (250)
T ss_dssp BCHHHHHHHHHHHHCCCC--------------EECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEE
T ss_pred ecchHHHHHHHHHhCCCc--------------eEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEE
Confidence 2222 2223333333333 2348999999999999999999999999999 6999999999999999
Q ss_pred EcCCCCC--------CCCCeeeCCcCchHH
Q 025190 200 VGKTVNV--------GEADYALENVNNLPQ 221 (256)
Q Consensus 200 v~~~~~~--------~~~~~~~~~~~el~~ 221 (256)
+..+... ..|+++++++.+|.+
T Consensus 220 v~~g~~~~~~~~~~~~~~~~v~~~~~el~~ 249 (250)
T 2c4n_A 220 VLSGVSSLDDIDSMPFRPSWIYPSVAEIDV 249 (250)
T ss_dssp ESSSSCCGGGGSSCSSCCSEEESSGGGCCC
T ss_pred ECCCCCChhhhhhcCCCCCEEECCHHHhhc
Confidence 9765321 479999999988753
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=152.10 Aligned_cols=121 Identities=11% Similarity=0.113 Sum_probs=94.1
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....++||+.++++.|+++|+ ++|++....++.. +.+|+..+++.+.+.+..... .+|.+...
T Consensus 76 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~k 141 (201)
T 4ap9_A 76 EKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQG-------------IRLRFRDK 141 (201)
T ss_dssp GGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEE-------------EECCSSCH
T ss_pred HhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceEC-------------CcCCccCH
Confidence 445899999999999999986 8999988888888 999998886665554432210 34444445
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHH
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~ 226 (256)
..+++++ ++++|++|||+.+|+++|+.+|+++++.+... .+++++.++.+|.++|+.+
T Consensus 142 ~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~---~ad~v~~~~~el~~~l~~l 199 (201)
T 4ap9_A 142 GEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP---GADLLVKDLKELVDFIKNL 199 (201)
T ss_dssp HHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT---TCSEEESSHHHHHHHHHTC
T ss_pred HHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc---cccEEEccHHHHHHHHHHh
Confidence 5666666 89999999999999999999999855444333 8999999999998888654
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.8e-22 Score=176.20 Aligned_cols=102 Identities=26% Similarity=0.355 Sum_probs=87.9
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecC--ChHHHHHHHHhc--CcccccceeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNS--DRNHAITCLKRL--EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~--~~~~~~~~l~~~--gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
...++||+.++|+.|+++|+ ++||+ ........+... |+..+||.++++++++. +||+|
T Consensus 98 ~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~--------------~KP~p 163 (555)
T 3i28_A 98 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGM--------------VKPEP 163 (555)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTC--------------CTTCH
T ss_pred hcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCC--------------CCCCH
Confidence 35899999999999999986 89998 222223333333 78889999999999887 89999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
++|..+++++|++|++|++|||+.+|+.+|+++|+.+++++++
T Consensus 164 ~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~ 206 (555)
T 3i28_A 164 QIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 206 (555)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSH
T ss_pred HHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCC
Confidence 9999999999999999999999999999999999999999754
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-21 Score=168.47 Aligned_cols=198 Identities=16% Similarity=0.097 Sum_probs=127.5
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh---hhhHHHHHHcCCCCChhhHhhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY---GSTLAGLRALGYDIGADDYHGF 79 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 79 (256)
+++|+|+||+||||++++. +.. +....|...... .....+.... ................+.+...
T Consensus 183 ~~~k~viFD~DgTLi~~~~-----~~~-----la~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~ 251 (415)
T 3p96_A 183 RAKRLIVFDVDSTLVQGEV-----IEM-----LAAKAGAEGQVA-AITDAAMRGELDFAQSLQQRVATLAGLPATVIDEV 251 (415)
T ss_dssp TCCCEEEECTBTTTBSSCH-----HHH-----HHHHTTCHHHHH-HHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHHH
T ss_pred cCCcEEEEcCcccCcCCch-----HHH-----HHHHcCCcHHHH-HHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHHH
Confidence 5689999999999999863 221 444556532221 1111111110 0001111111122333334333
Q ss_pred hhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCC
Q 025190 80 VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 80 ~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
. ..+.++||+.++++.|+++|+ ++||+....++.+++.+|+..+|+..+...+.. +.+ ........+
T Consensus 252 ~------~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~---~tg-~~~~~v~~~ 321 (415)
T 3p96_A 252 A------GQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGT---LTG-RVVGPIIDR 321 (415)
T ss_dssp H------HHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTE---EEE-EECSSCCCH
T ss_pred H------HhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCE---EEe-eEccCCCCC
Confidence 2 235899999999999999987 999999999999999999988776543221110 000 001123347
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeC--CcCchHH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALE--NVNNLPQ 221 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~--~~~el~~ 221 (256)
|||+..+..+++++|++++++++|||+.+|+.+|+.+|+++++...+.....+++++. ++..+..
T Consensus 322 kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~~~~~~~~~~ad~~i~~~~l~~ll~ 388 (415)
T 3p96_A 322 AGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFNAKPALREVADASLSHPYLDTVLF 388 (415)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHHHCSEEECSSCTTHHHH
T ss_pred cchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEECCCHHHHHhCCEEEccCCHHHHHH
Confidence 9999999999999999999999999999999999999999988333333345777765 3444433
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.85 E-value=9e-21 Score=150.70 Aligned_cols=108 Identities=9% Similarity=0.011 Sum_probs=85.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
.++||+.++|+.|+++|+ |+|++....++.+++.+|+..++...+...+.. +.+ ........+++|+..+..+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~g-~~~~~~~~~~~K~~~~~~~ 167 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGR---YTG-RIEGTPSFREGKVVRVNQW 167 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTE---EEE-EEESSCSSTHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCE---Eee-eecCCCCcchHHHHHHHHH
Confidence 579999999999999986 999999999999999999987765544322210 000 0001233467888999999
Q ss_pred HHHcC---CCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 167 LHVAN---VDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 167 ~~~~~---~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
++++| +++++|++||||.+|+++++.+|+.++..+
T Consensus 168 ~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~ 205 (232)
T 3fvv_A 168 LAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANP 205 (232)
T ss_dssp HHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESC
T ss_pred HHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECc
Confidence 99999 999999999999999999999999887653
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.4e-22 Score=154.51 Aligned_cols=125 Identities=12% Similarity=0.103 Sum_probs=92.1
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc--cccce-eEe-cccCCcccccCCCCCCCCCCCCCCH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA--DCFDQ-IIC-FETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~--~~f~~-i~~-~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
...++||+.++++.|+++|+ ++|++....++..++.+|+. .+|.. ++. .+.... .....||++
T Consensus 80 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 149 (219)
T 3kd3_A 80 PNLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFK----------ELDNSNGAC 149 (219)
T ss_dssp TTTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEE----------EEECTTSTT
T ss_pred cccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCcee----------ccCCCCCCc
Confidence 34588999999999999986 89999999999999999994 35543 222 222100 011256665
Q ss_pred HHH-HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC------CCCCeeeCCcCchHHhH
Q 025190 161 DAM-KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV------GEADYALENVNNLPQVV 223 (256)
Q Consensus 161 ~~~-~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~------~~~~~~~~~~~el~~~l 223 (256)
..+ +.+++.+|++++++++|||+.+|++++ ++|+.++++..+... ..++++++++.+|.++|
T Consensus 150 ~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 150 DSKLSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp TCHHHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred ccHHHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 544 445555799999999999999999998 589998777644322 35999999999988764
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-21 Score=141.57 Aligned_cols=98 Identities=22% Similarity=0.333 Sum_probs=89.9
Q ss_pred ChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHH
Q 025190 92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALH 168 (256)
Q Consensus 92 ~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~ 168 (256)
+||+.++|+.|+++|+ ++||+....++..++.+|+..+|+.++++++.+. .||+|..|..+++
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------~Kp~~~~~~~~~~ 85 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGV--------------EKPEEAAFQAAAD 85 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSC--------------CTTSHHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCC--------------CCCCHHHHHHHHH
Confidence 4678888999998885 8999999999999999999999999999888775 7999999999999
Q ss_pred HcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 169 VANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 169 ~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
+++++++++++|||+.+|+.+|+++|+.++++.++
T Consensus 86 ~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 86 AIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp HTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCH
T ss_pred HcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCCh
Confidence 99999999999999999999999999999998754
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-21 Score=151.89 Aligned_cols=135 Identities=17% Similarity=0.204 Sum_probs=103.3
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCCh---------------HHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDR---------------NHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~---------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
...++||+.++|+.|+++|+ ++||+.. ..++..++.+|+. |+.++.+.....+.+. ..
T Consensus 54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~--~~ 129 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGP--LA 129 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCST--TC
T ss_pred cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCcee--ec
Confidence 35789999999999999886 8999987 6888899999975 6654432100000000 00
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeE-EEEcCCCCC-----CCCCeeeCCcCchHHhH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRT-VLVGKTVNV-----GEADYALENVNNLPQVV 223 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~-v~v~~~~~~-----~~~~~~~~~~~el~~~l 223 (256)
.+....+||+|.+|..++++++++++++++|||+.+|+.+|+++|+.+ +++.++... ..|+++++++.+|.++|
T Consensus 130 ~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l 209 (218)
T 2o2x_A 130 IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAI 209 (218)
T ss_dssp CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHH
T ss_pred ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHH
Confidence 011234899999999999999999999999999999999999999999 999876421 35788899998888877
Q ss_pred HHH
Q 025190 224 PEI 226 (256)
Q Consensus 224 ~~~ 226 (256)
..+
T Consensus 210 ~~~ 212 (218)
T 2o2x_A 210 ETL 212 (218)
T ss_dssp HHT
T ss_pred HHH
Confidence 654
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=157.89 Aligned_cols=137 Identities=12% Similarity=0.071 Sum_probs=101.7
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
...++||+.++++.|++.|+ ++||+....++.+++.+|+..+|+..+...+... .+ ..+.....+|||+..+.
T Consensus 176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~---tg-~~~~~~~~~kpk~~~~~ 251 (335)
T 3n28_A 176 TLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKL---TG-QVLGEVVSAQTKADILL 251 (335)
T ss_dssp TCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE---EE-EEESCCCCHHHHHHHHH
T ss_pred hCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCee---ee-eecccccChhhhHHHHH
Confidence 46799999999999999987 9999999999999999999888876543221100 00 00011223799999999
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeee--CCcCchHHhHHHHHh
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYAL--ENVNNLPQVVPEIWV 228 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~--~~~~el~~~l~~~~~ 228 (256)
.+++++|+++++|++|||+.+|+.+++.+|+++++...+..+..+++++ .++.++..+|...+.
T Consensus 252 ~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~ 317 (335)
T 3n28_A 252 TLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAYHAKPKVEAKAQTAVRFAGLGGVVCILSAALV 317 (335)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHTTSSEEESSSCTHHHHHHHHHHHH
T ss_pred HHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEEecCCHHHHHHHHHhHHH
Confidence 9999999999999999999999999999999988833333345567665 334445555555543
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=145.45 Aligned_cols=99 Identities=11% Similarity=0.202 Sum_probs=89.3
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCC-hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSD-RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~-~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
....++||+.++|+.|+++|+ ++||+. ...++..++.+|+..+|+.++.. .+|++..
T Consensus 65 ~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~-------------------~~~k~~~ 125 (187)
T 2wm8_A 65 QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY-------------------PGSKITH 125 (187)
T ss_dssp CEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEES-------------------SSCHHHH
T ss_pred cccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEE-------------------eCchHHH
Confidence 356789999999999999886 899998 68999999999999999987542 4678899
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
|..+++++|+++++|++|||+.+|+.+|+++|+.++++.++.
T Consensus 126 ~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~ 167 (187)
T 2wm8_A 126 FERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGM 167 (187)
T ss_dssp HHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSC
T ss_pred HHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCCC
Confidence 999999999999999999999999999999999999998764
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.1e-22 Score=161.32 Aligned_cols=121 Identities=17% Similarity=0.192 Sum_probs=93.9
Q ss_pred CCCCChhHHHHHHhhhcCcE--EEecCChHHHHH---HHHhcCcccccceeEeccc-CCcccccCCCCCCCCCCCCCCHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI--IFTNSDRNHAIT---CLKRLEIADCFDQIICFET-MNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~---~l~~~gl~~~f~~i~~~~~-~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
...++|++.++++.| +.++ ++||........ .++..++..+|+.+++.+. ... +||++.
T Consensus 135 ~~~~~~~~~~~l~~l-~~~~~~i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------------~kpk~~ 199 (271)
T 1vjr_A 135 KTLTYERLKKACILL-RKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIA--------------GKPNPL 199 (271)
T ss_dssp TTCCHHHHHHHHHHH-TTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEEC--------------STTSTH
T ss_pred CCcCHHHHHHHHHHH-HCCCeEEEECCCccccCCCCccccccHHHHHHHHHhCCCCcccC--------------CCCCHH
Confidence 346789999999999 5665 777765432211 2233345566776666655 444 799999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC--------CCCCeeeCCcCchHHhH
Q 025190 162 AMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV--------GEADYALENVNNLPQVV 223 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~--------~~~~~~~~~~~el~~~l 223 (256)
+++.+++++|++++++++|||++ +|+++|+.+|+.++++.++... ..|+++++++.+|.++|
T Consensus 200 ~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 200 VVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 99999999999999999999995 9999999999999999876532 37999999998887765
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.8e-19 Score=151.59 Aligned_cols=135 Identities=16% Similarity=0.220 Sum_probs=111.5
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccc--eeEecccCCcccccCCCCCCCCCCCCCCHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFD--QIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
....++||+.++|+.|+++|+ ++||+....++..++++|+.++|+ .+++++++... +.........+||+|.
T Consensus 212 ~~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~---~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 212 IILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA---ENMYPQARPLGKPNPF 288 (384)
T ss_dssp CBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH---HHHSTTSCCCCTTSTH
T ss_pred cCCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc---ccccccccCCCCCCHH
Confidence 356899999999999999986 999999999999999999999999 88988875310 0000000012799999
Q ss_pred HHHHHHHHcC--------------CCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC---------CCCCCeeeCCcCc
Q 025190 162 AMKLALHVAN--------------VDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN---------VGEADYALENVNN 218 (256)
Q Consensus 162 ~~~~~~~~~~--------------~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~---------~~~~~~~~~~~~e 218 (256)
.|..++++++ ++|++|++|||+.+|+.+|+++|+.++++.++.. ...|+++++++.+
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~e 368 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGE 368 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGG
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHH
Confidence 9999999999 8999999999999999999999999999987642 2469999999999
Q ss_pred hHHhHH
Q 025190 219 LPQVVP 224 (256)
Q Consensus 219 l~~~l~ 224 (256)
|.++|.
T Consensus 369 L~~~l~ 374 (384)
T 1qyi_A 369 LRGVLD 374 (384)
T ss_dssp HHHHHS
T ss_pred HHHHHH
Confidence 987763
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.7e-21 Score=154.72 Aligned_cols=122 Identities=16% Similarity=0.151 Sum_probs=97.8
Q ss_pred CCCCCChhHHHHHHhhhcCcE--EEecCChHHH--HHHHHh-cCcccccceeEecccCCcccccCCCCCCCCCCCCCCHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI--IFTNSDRNHA--ITCLKR-LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~--~~~l~~-~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
....++|++.++++.|+ +|+ ++||...... ...+.. .++..+|+.+++++.... +||+|.
T Consensus 127 ~~~~~~~~~~~~l~~L~-~g~~~i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~--------------~KP~~~ 191 (263)
T 1zjj_A 127 DPDLTYEKLKYATLAIR-NGATFIGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIII--------------GKPNEP 191 (263)
T ss_dssp CTTCBHHHHHHHHHHHH-TTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEEC--------------STTSHH
T ss_pred CCCCCHHHHHHHHHHHH-CCCEEEEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEe--------------cCCCHH
Confidence 34578999999999999 666 8888876543 222333 456667888877776554 799999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC--------CCCCeeeCCcCchHHhHHH
Q 025190 162 AMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV--------GEADYALENVNNLPQVVPE 225 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~--------~~~~~~~~~~~el~~~l~~ 225 (256)
+|..++++ ++|+++++|||++ +|+.+|+++|+.++++.++... ..|+++++++.+|.++|..
T Consensus 192 ~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~~ 262 (263)
T 1zjj_A 192 MYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLKT 262 (263)
T ss_dssp HHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC-
T ss_pred HHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHhh
Confidence 99999999 9999999999996 9999999999999999876431 2699999999999887643
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.2e-21 Score=142.99 Aligned_cols=114 Identities=14% Similarity=0.147 Sum_probs=93.2
Q ss_pred ChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHH
Q 025190 92 DPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALH 168 (256)
Q Consensus 92 ~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~ 168 (256)
.|+..++|+.|+++|+ ++||+....++..++.+|+..+|+. +||++..+.++++
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~-----------------------~kp~~~~~~~~~~ 94 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG-----------------------SYKKLEIYEKIKE 94 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC-----------------------C--CHHHHHHHHH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC-----------------------CCCCHHHHHHHHH
Confidence 4667899999999986 9999999999999999998766542 5999999999999
Q ss_pred HcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-CCCCCCeeeCCcCc---hHHhHHHHHh
Q 025190 169 VANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-NVGEADYALENVNN---LPQVVPEIWV 228 (256)
Q Consensus 169 ~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-~~~~~~~~~~~~~e---l~~~l~~~~~ 228 (256)
+++++++++++|||+.+|+.+|+.+|+.+++.+... ....+++++.++.+ +.++++.++.
T Consensus 95 ~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~~~~~~~~~~ 158 (162)
T 2p9j_A 95 KYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGALREVAELIHF 158 (162)
T ss_dssp HTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHHHHHHHHHHH
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999977543221 22358999999887 5566766653
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-20 Score=141.35 Aligned_cols=102 Identities=14% Similarity=0.284 Sum_probs=86.5
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecC---------------ChHHHHHHHHhcCcccccceeEec-----ccCCccc
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNS---------------DRNHAITCLKRLEIADCFDQIICF-----ETMNPNL 143 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~---------------~~~~~~~~l~~~gl~~~f~~i~~~-----~~~~~~~ 143 (256)
....++||+.++|+.|+++|+ ++||+ ....++..++.+|+. |+.++.+ ++.+.
T Consensus 39 ~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~-- 114 (176)
T 2fpr_A 39 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDC-- 114 (176)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSS--
T ss_pred HHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccc--
Confidence 346789999999999999987 89998 567888899999987 8888654 55554
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 144 SKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 144 ~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
.||+|.+|..++++++++|+++++|||+.+|+.+|+++|+.++++.++.
T Consensus 115 ------------~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 115 ------------RKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 163 (176)
T ss_dssp ------------STTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred ------------cCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence 7999999999999999999999999999999999999999999998764
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=9.2e-22 Score=152.54 Aligned_cols=174 Identities=14% Similarity=0.082 Sum_probs=118.8
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhcCC
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRL 84 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (256)
.|+|+||+||||+|+...+..++.++ +. |++....+... .+. ....+..+ .....+.+...+.+..
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~-----~~--g~~~~~~~~~~-----~~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 67 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRR-----FP--EEPHVPLEQRR-----GFL-AREQYRAL-RPDLADKVASVYEAPG 67 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHH-----ST--TSCCCCGGGCC-----SSC-HHHHHHHH-CTTHHHHHHHHHTSTT
T ss_pred CcEEEEECCCcCccchhHHHHHHHHH-----hc--CCCCCCHHHHH-----Hhh-HHHHHHHH-hHHHHHHHHHHHHhcC
Confidence 58999999999999988887777753 22 43311000000 000 00011111 1111233444444432
Q ss_pred CCCCCCCChhHHHHHHhhhcC-cE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 85 PYDLIKPDPQLRNLLCSITQR-KI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 85 ~~~~~~~~pg~~~~l~~l~~~-~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
......++||+.++|+.|+++ |+ ++||+....++..++.+|+ |+.++++
T Consensus 68 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~------------------------ 120 (193)
T 2i7d_A 68 FFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGP------------------------ 120 (193)
T ss_dssp TTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCH------------------------
T ss_pred ccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCH------------------------
Confidence 234678999999999999998 86 9999999889999999998 7776642
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccc----cHHHH-HcCCeEEEEcCCCCCC---CCCe-eeCCc-CchHHhH
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKN----VTAGK-ALGLRTVLVGKTVNVG---EADY-ALENV-NNLPQVV 223 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~D----i~~a~-~~G~~~v~v~~~~~~~---~~~~-~~~~~-~el~~~l 223 (256)
.+++++|++|++|++|||+.+| +.+|+ ++|+.++++.++.... .+++ .+.++ +++.++|
T Consensus 121 ----~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 189 (193)
T 2i7d_A 121 ----QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWSDNWREIL 189 (193)
T ss_dssp ----HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTTSCHHHHH
T ss_pred ----HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHHHHHHHHh
Confidence 2688899999999999999998 99999 9999999998654322 2344 68888 5566555
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.9e-21 Score=158.41 Aligned_cols=124 Identities=19% Similarity=0.206 Sum_probs=99.8
Q ss_pred CCCCCChhHHHHHHhhhcCcE--EEecCChHHH--H-HHHHhcC-cccccceeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI--IFTNSDRNHA--I-TCLKRLE-IADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~--~-~~l~~~g-l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
....++|++.++++.|++.++ ++||...... . ..+...| +..+|+.+++++.... +||+|
T Consensus 153 ~~~~~~~~~~~~l~~l~~~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~--------------~KP~~ 218 (306)
T 2oyc_A 153 DEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVV--------------GKPSP 218 (306)
T ss_dssp CTTCCHHHHHHHHHHHTSTTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEEC--------------STTST
T ss_pred CCCCCHHHHHHHHHHHHcCCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceee--------------CCCCH
Confidence 345678999999999998776 8888765543 1 2333444 5667777777666654 79999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC--------------CCCCeeeCCcCchHHhHH
Q 025190 161 DAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV--------------GEADYALENVNNLPQVVP 224 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~--------------~~~~~~~~~~~el~~~l~ 224 (256)
.+|+.+++++|++|+++++|||++ +|+.+|+.+|+.++++.++... ..|+++++++.+|.++++
T Consensus 219 ~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 219 YMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp HHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-
T ss_pred HHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHH
Confidence 999999999999999999999997 9999999999999999876431 469999999999987764
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.1e-21 Score=150.02 Aligned_cols=174 Identities=10% Similarity=0.062 Sum_probs=119.9
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhc
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCG-FSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHG 82 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (256)
+.|+|+||+||||+|+...+..++.+++. .+. .+..... .+.. ...+..+. ....+.+...+.+
T Consensus 3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~-----~~~~~~~~~~~--------~~~~-~~~~~~~~-~~~~~~~~~~~~~ 67 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGGFLRKFRARFP-----DQPFIALEDRR--------GFWV-SEQYGRLR-PGLSEKAISIWES 67 (197)
T ss_dssp CCEEEEECSBTTTBCHHHHHHHHHHHHCT-----TSCCCCGGGCC--------SSCH-HHHHHHHS-TTHHHHHHHHHTS
T ss_pred CceEEEEeCCCCCccCcHHHHHHHHHHHh-----cCCCCCHHHhc--------CCcH-HHHHHhcC-HHHHHHHHHHHHh
Confidence 56899999999999999888888877433 221 1111100 0000 00011111 0111223333333
Q ss_pred CCCCCCCCCChhHHHHHHhhhcC-cE---EEecCChHHHHHHHHhcCccc-ccceeEecccCCcccccCCCCCCCCCCCC
Q 025190 83 RLPYDLIKPDPQLRNLLCSITQR-KI---IFTNSDRNHAITCLKRLEIAD-CFDQIICFETMNPNLSKATRPDEFPVLLK 157 (256)
Q Consensus 83 ~~~~~~~~~~pg~~~~l~~l~~~-~~---ivs~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~~~~~~~~~~~~~~~K 157 (256)
........++||+.++|+.|+++ |+ ++||+....++..++++|+.+ +|+
T Consensus 68 ~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~-------------------------- 121 (197)
T 1q92_A 68 KNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG-------------------------- 121 (197)
T ss_dssp TTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC--------------------------
T ss_pred hhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch--------------------------
Confidence 22234678999999999999998 76 999999888888999999887 775
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCccc----cHHHH-HcCCeEEEEcCCCCC---CCCC-eeeCCc-CchHHhHH
Q 025190 158 PSMDAMKLALHVANVDPRHALFLDDNIKN----VTAGK-ALGLRTVLVGKTVNV---GEAD-YALENV-NNLPQVVP 224 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~~~~i~vGDs~~D----i~~a~-~~G~~~v~v~~~~~~---~~~~-~~~~~~-~el~~~l~ 224 (256)
..++++++++|++|++|||+..| +.+|+ ++|+.++++.++... ..++ .++.++ .++..+|.
T Consensus 122 ------~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l~ 192 (197)
T 1q92_A 122 ------PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILD 192 (197)
T ss_dssp ------GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHH
T ss_pred ------HHHHHHhccCCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHHHHHHhc
Confidence 14567789999999999999998 99999 999999999866433 2233 478999 57877765
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.1e-21 Score=155.18 Aligned_cols=72 Identities=24% Similarity=0.315 Sum_probs=63.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC--------CCCCCeeeCCcCchHHhHHH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN--------VGEADYALENVNNLPQVVPE 225 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~~~~~~~~~~el~~~l~~ 225 (256)
.+||++.+++.+++++|+++++|++|||+. ||+.+|+.+|+.++++.++.. ...|+++++++.++.++|..
T Consensus 188 ~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 267 (271)
T 2x4d_A 188 VGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQ 267 (271)
T ss_dssp ESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHh
Confidence 489999999999999999999999999999 999999999999999987621 24589999999999887754
Q ss_pred H
Q 025190 226 I 226 (256)
Q Consensus 226 ~ 226 (256)
.
T Consensus 268 ~ 268 (271)
T 2x4d_A 268 H 268 (271)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.2e-19 Score=145.00 Aligned_cols=72 Identities=32% Similarity=0.472 Sum_probs=63.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCCC------------CCCCeeeCCcCch
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVNV------------GEADYALENVNNL 219 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~~------------~~~~~~~~~~~el 219 (256)
...+||++.++..+++++|++++++++|||++ +|+.+|+.+|+.+++|.++... ..|+++++++.+|
T Consensus 183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el 262 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM 262 (268)
T ss_dssp EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence 56799999999999999999999999999995 9999999999999999876422 2699999999999
Q ss_pred HHhHH
Q 025190 220 PQVVP 224 (256)
Q Consensus 220 ~~~l~ 224 (256)
.++|.
T Consensus 263 ~~~l~ 267 (268)
T 3qgm_A 263 VEALE 267 (268)
T ss_dssp HHTC-
T ss_pred HHHHh
Confidence 88764
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-20 Score=141.71 Aligned_cols=107 Identities=12% Similarity=0.164 Sum_probs=88.0
Q ss_pred HHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 025190 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (256)
Q Consensus 98 ~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 174 (256)
+++.|+++|+ ++||+....++..++++|+..+|+. .||+|..+..+++++++++
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~-----------------------~kpk~~~~~~~~~~~~~~~ 95 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG-----------------------VVDKLSAAEELCNELGINL 95 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS-----------------------CSCHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc-----------------------cCChHHHHHHHHHHcCCCH
Confidence 7888888886 9999999999999999998765544 4999999999999999999
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc---hHHhHHHHH
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN---LPQVVPEIW 227 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e---l~~~l~~~~ 227 (256)
+++++|||+.+|+.+++.+|+.+++.+.. .....+++++.+... +.++++.++
T Consensus 96 ~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll 152 (164)
T 3e8m_A 96 EQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVEKVL 152 (164)
T ss_dssp GGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred HHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHHHHH
Confidence 99999999999999999999988765432 223558888877442 556666655
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-19 Score=145.61 Aligned_cols=66 Identities=24% Similarity=0.398 Sum_probs=58.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCC-ccccHHHHHcCCeEEEEcCCCCC--------CCCCeeeCCcCchH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDN-IKNVTAGKALGLRTVLVGKTVNV--------GEADYALENVNNLP 220 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~G~~~v~v~~~~~~--------~~~~~~~~~~~el~ 220 (256)
.+||++.++..+++++|++++++++|||+ .+|+.+|+.+|+.++++.++... ..|+++++++.+|.
T Consensus 180 ~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~ 254 (264)
T 3epr_A 180 IGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWT 254 (264)
T ss_dssp CSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred CCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHh
Confidence 38999999999999999999999999999 59999999999999999876421 27999999998774
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-20 Score=155.08 Aligned_cols=113 Identities=19% Similarity=0.224 Sum_probs=93.0
Q ss_pred hhHHHHHHhhhcCcE--EEecCChHHH--H--HHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 93 PQLRNLLCSITQRKI--IFTNSDRNHA--I--TCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 93 pg~~~~l~~l~~~~~--ivs~~~~~~~--~--~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
+...++++.|+++|+ ++||...... . ..++..++..+|+.++++++... +||+|.+|..+
T Consensus 148 ~~~~~l~~~L~~~g~~~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~--------------~KP~p~~~~~a 213 (284)
T 2hx1_A 148 HDLNKTVNLLRKRTIPAIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRF--------------GKPDSQMFMFA 213 (284)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEE--------------STTSSHHHHHH
T ss_pred ccHHHHHHHHhcCCCeEEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEe--------------cCCCHHHHHHH
Confidence 366667778877776 9999876655 3 12356678888999888877665 79999999999
Q ss_pred HHHc----CCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC----------C--CCCCeeeCCcCch
Q 025190 167 LHVA----NVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN----------V--GEADYALENVNNL 219 (256)
Q Consensus 167 ~~~~----~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~----------~--~~~~~~~~~~~el 219 (256)
++++ |++|++|++|||++ +||.+|+++|+.++++.++.. . ..|+++++++.+|
T Consensus 214 ~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 214 YDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp HHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred HHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 9999 99999999999996 999999999999999987642 1 4689999998876
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-20 Score=143.05 Aligned_cols=95 Identities=12% Similarity=0.199 Sum_probs=80.2
Q ss_pred HHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 025190 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (256)
Q Consensus 98 ~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 174 (256)
+|+.|+++|+ ++|++....++..++.+|+. ++.+ .|||+..+..+++++++++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-----~~~~-------------------~~~k~~~l~~~~~~~~~~~ 102 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-----VLHG-------------------IDRKDLALKQWCEEQGIAP 102 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----EEES-------------------CSCHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----eEeC-------------------CCChHHHHHHHHHHcCCCH
Confidence 8899999887 99999999999999999986 3331 4899999999999999999
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCc
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENV 216 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~ 216 (256)
+++++|||+.+|+++++.+|+.+++.+.. .....+++++.+.
T Consensus 103 ~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~ 145 (176)
T 3mmz_A 103 ERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVP 145 (176)
T ss_dssp GGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSC
T ss_pred HHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCC
Confidence 99999999999999999999887654422 2234588998883
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-19 Score=147.00 Aligned_cols=123 Identities=18% Similarity=0.172 Sum_probs=83.6
Q ss_pred CCCChhHHHHHHhhhcCcE-EEecCChHHHHH---HHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI-IFTNSDRNHAIT---CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~-ivs~~~~~~~~~---~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
...++++.+.+..++.... ++++........ .....++..+|+.++..+... .+||++.+++
T Consensus 125 ~~~~~~~~~~~~~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~kp~~~~~~ 190 (266)
T 3pdw_A 125 SITYEKFAVGCLAIRNGARFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVF--------------IGKPESIIME 190 (266)
T ss_dssp TCCHHHHHHHHHHHHTTCEEEESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEE--------------CSTTSSHHHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEcCCceeECCCceEecchHHHHHHHHHhCCCccc--------------cCCCCHHHHH
Confidence 3456777777766665333 555543221100 000111223344444444333 3899999999
Q ss_pred HHHHHcCCCCCcEEEEcCC-ccccHHHHHcCCeEEEEcCCCC-----CC---CCCeeeCCcCchHHhHHH
Q 025190 165 LALHVANVDPRHALFLDDN-IKNVTAGKALGLRTVLVGKTVN-----VG---EADYALENVNNLPQVVPE 225 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~G~~~v~v~~~~~-----~~---~~~~~~~~~~el~~~l~~ 225 (256)
.+++++|++++++++|||+ .+|+.+|+.+|+.+++++++.. +. .|++++.++.||.+-++.
T Consensus 191 ~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~~ 260 (266)
T 3pdw_A 191 QAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIEG 260 (266)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHHHH
T ss_pred HHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhhc
Confidence 9999999999999999999 6999999999999999986531 12 599999999999876643
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-19 Score=146.72 Aligned_cols=78 Identities=10% Similarity=0.110 Sum_probs=61.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHHHhc
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEIWVS 229 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~~~~ 229 (256)
...+++|+.+++++++++|++++++++|||+.||++|++.+|+++++-+.. ..+..|++++.+..+ +..+|+.++..
T Consensus 192 ~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~ 271 (279)
T 4dw8_A 192 VPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFNV 271 (279)
T ss_dssp ECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC--
T ss_pred ecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHhc
Confidence 344778899999999999999999999999999999999999877765432 233558999988877 77788776643
Q ss_pred C
Q 025190 230 Q 230 (256)
Q Consensus 230 ~ 230 (256)
.
T Consensus 272 ~ 272 (279)
T 4dw8_A 272 E 272 (279)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.3e-20 Score=143.43 Aligned_cols=98 Identities=20% Similarity=0.198 Sum_probs=77.6
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
.++|++.++|+.|+++|+ ++||+.....+..++. +.++|+.++.+.+.. .....||+|..+..+
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~-----------~~~~~KP~p~~~~~~ 154 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPV-----------IFAGDKPGQNTKSQW 154 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCC-----------EECCCCTTCCCSHHH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchh-----------hhcCCCCCHHHHHHH
Confidence 368899999999999886 8999977766666666 556677653322110 001269999999999
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
++++|+ |++|||+.+|+.+|+++|+.++++.++.
T Consensus 155 ~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~~g~ 188 (211)
T 2b82_A 155 LQDKNI----RIFYGDSDNDITAARDVGARGIRILRAS 188 (211)
T ss_dssp HHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred HHHCCC----EEEEECCHHHHHHHHHCCCeEEEEecCC
Confidence 999998 9999999999999999999999998764
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-20 Score=144.70 Aligned_cols=108 Identities=14% Similarity=0.189 Sum_probs=89.3
Q ss_pred HHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 025190 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (256)
Q Consensus 98 ~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 174 (256)
+|+.|+++|+ ++|+.....++.+++.+|+..+|+. .|||+..+..+++++|+++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~-----------------------~k~K~~~l~~~~~~lg~~~ 140 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQG-----------------------QSDKLVAYHELLATLQCQP 140 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECS-----------------------CSSHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhcc-----------------------cCChHHHHHHHHHHcCcCc
Confidence 8999999987 9999999999999999998766653 3778899999999999999
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc---hHHhHHHHHh
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN---LPQVVPEIWV 228 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e---l~~~l~~~~~ 228 (256)
++|++|||+.+|+++++.+|+.++..+.. .....+++++.+..+ +.++++.++.
T Consensus 141 ~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll~ 198 (211)
T 3ij5_A 141 EQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRGAVREVCDLILL 198 (211)
T ss_dssp GGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHHHHHH
T ss_pred ceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999987765432 344569999988743 4555555553
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-19 Score=146.53 Aligned_cols=111 Identities=12% Similarity=0.165 Sum_probs=90.2
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
...++||+.++|+.|+++|+ ++||+....++..++.+|+..+|+.++ +++| .
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~---------------------~~~K----~ 215 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL---------------------PHQK----S 215 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC---------------------TTCH----H
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecC---------------------hHHH----H
Confidence 45789999999999999986 999999999999999999988887653 1232 5
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC-CCCCCCCCeee--CCcCchHHhHH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK-TVNVGEADYAL--ENVNNLPQVVP 224 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~-~~~~~~~~~~~--~~~~el~~~l~ 224 (256)
.++++++.. ++|++|||+.+|+.+|+.+|+.+++.+. ......+++++ .++.++.++|.
T Consensus 216 ~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~ 277 (287)
T 3a1c_A 216 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 277 (287)
T ss_dssp HHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEEESSSCTHHHHHHHH
T ss_pred HHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 788888998 9999999999999999999998444322 22345689999 88888877663
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.4e-20 Score=150.60 Aligned_cols=110 Identities=18% Similarity=0.256 Sum_probs=87.7
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
.++||+.++|+.|+++|+ ++|++....++..++.+|+..+|+.+++.+. ....+..
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~k---------------------~~~~k~~ 202 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHEK---------------------AEKVKEV 202 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGGH---------------------HHHHHHH
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHHH---------------------HHHHHHH
Confidence 688999999999999886 8999999999999999999999988776433 2444444
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeee--CCcCchHHhHHH
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYAL--ENVNNLPQVVPE 225 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~--~~~~el~~~l~~ 225 (256)
.+.+ ++++|||+.||+++++.+|+.+++.+.. .....+++++ .++.++.++|..
T Consensus 203 ~~~~-----~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~ 259 (280)
T 3skx_A 203 QQKY-----VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVEL 259 (280)
T ss_dssp HTTS-----CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHHHHH
T ss_pred HhcC-----CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHHHHH
Confidence 4444 7899999999999999999876665432 3345678887 888888887754
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.5e-20 Score=143.19 Aligned_cols=96 Identities=11% Similarity=0.123 Sum_probs=81.4
Q ss_pred HHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 025190 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (256)
Q Consensus 98 ~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 174 (256)
+|+.|+++|+ ++|+.....++..++++|+..+|+.+ ++||..+..+++++|+++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~-----------------------~~K~~~~~~~~~~~g~~~ 110 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR-----------------------EDKLVVLDKLLAELQLGY 110 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC-----------------------SCHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc-----------------------CChHHHHHHHHHHcCCCh
Confidence 8899999886 99999999999999999998777653 555599999999999999
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCc
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENV 216 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~ 216 (256)
++|++|||+.+|+.+++.+|+.+++.+.. .....+++++.+.
T Consensus 111 ~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~ 153 (189)
T 3mn1_A 111 EQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQ 153 (189)
T ss_dssp GGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSC
T ss_pred hHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCC
Confidence 99999999999999999999987654422 2235689998884
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=6e-19 Score=135.18 Aligned_cols=113 Identities=13% Similarity=0.040 Sum_probs=91.5
Q ss_pred hhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHH
Q 025190 93 PQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHV 169 (256)
Q Consensus 93 pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~ 169 (256)
+...++|+.|+++|+ ++|++....++..++.+|+..+|+. .||++..+++++++
T Consensus 38 ~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~-----------------------~k~k~~~~~~~~~~ 94 (180)
T 1k1e_A 38 VRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG-----------------------KLEKETACFDLMKQ 94 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES-----------------------CSCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC-----------------------CCCcHHHHHHHHHH
Confidence 445689999999886 9999999999999999998765531 58999999999999
Q ss_pred cCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hH-HhHHHHHh
Q 025190 170 ANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LP-QVVPEIWV 228 (256)
Q Consensus 170 ~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~-~~l~~~~~ 228 (256)
++++++++++|||+.+|+.+++.+|+.+++.+.. .....+++++.+..+ +. ++++.++.
T Consensus 95 ~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~ 157 (180)
T 1k1e_A 95 AGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQ 157 (180)
T ss_dssp HTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHH
T ss_pred cCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999998865432 223568999988754 23 44555543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.4e-19 Score=136.18 Aligned_cols=107 Identities=14% Similarity=0.167 Sum_probs=86.0
Q ss_pred HHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 025190 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (256)
Q Consensus 98 ~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 174 (256)
.|+.|++.|+ ++||+....++.+++.+|+..+|+. .||++..+..+++++++++
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~-----------------------~k~k~~~~~~~~~~~~~~~ 116 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQG-----------------------QDDKVQAYYDICQKLAIAP 116 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECS-----------------------CSSHHHHHHHHHHHHCCCG
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeC-----------------------CCCcHHHHHHHHHHhCCCH
Confidence 5888998886 9999999999999999998765532 4899999999999999999
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc---hHHhHHHHH
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN---LPQVVPEIW 227 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e---l~~~l~~~~ 227 (256)
+++++|||+.||+++++.+|+.+++.+.. ..+..+++++.+..+ +.++++.++
T Consensus 117 ~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il 173 (195)
T 3n07_A 117 EQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVREVCDLIL 173 (195)
T ss_dssp GGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHHHHHHHHHH
T ss_pred HHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHHHHHHHHHH
Confidence 99999999999999999999887754332 223468899887543 334444444
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-18 Score=143.21 Aligned_cols=126 Identities=9% Similarity=0.068 Sum_probs=95.4
Q ss_pred CCChhHHHHHHhhhcC-cE---EEecC---------------------ChHHHHHHHHhcCccccccee----------E
Q 025190 90 KPDPQLRNLLCSITQR-KI---IFTNS---------------------DRNHAITCLKRLEIADCFDQI----------I 134 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~-~~---ivs~~---------------------~~~~~~~~l~~~gl~~~f~~i----------~ 134 (256)
.+.+++.++++.++++ |+ +.|+. ....+...++..|+..+|..+ +
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence 6789999999999876 65 55554 345667778888887666543 3
Q ss_pred ecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeee
Q 025190 135 CFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYAL 213 (256)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~ 213 (256)
+.+... .+++|+..+.++++++|+++++|++|||+.||+.+++.+|+.+++.+.. ..+..+++++
T Consensus 202 ~~~~~~--------------~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v~ 267 (289)
T 3gyg_A 202 DVDFIP--------------IGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLIT 267 (289)
T ss_dssp EEEEEE--------------SCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCBC
T ss_pred EEEEEe--------------CCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEEc
Confidence 333333 3799999999999999999999999999999999999999776554322 1234578888
Q ss_pred CCcCc--hHHhHHHHHhc
Q 025190 214 ENVNN--LPQVVPEIWVS 229 (256)
Q Consensus 214 ~~~~e--l~~~l~~~~~~ 229 (256)
.+..+ +.+.|+.++..
T Consensus 268 ~~~~~~gv~~~~~~~~~~ 285 (289)
T 3gyg_A 268 DSEYSKGITNTLKKLIGF 285 (289)
T ss_dssp SSCHHHHHHHHHHHHTCC
T ss_pred CCCCcCHHHHHHHHHHHH
Confidence 88877 77777776653
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=9.5e-18 Score=137.78 Aligned_cols=78 Identities=8% Similarity=0.057 Sum_probs=65.1
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHHHh
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEIWV 228 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~~~ 228 (256)
....+.+|+.+++++++++|++++++++|||+.||++|++.+|+.+++.+.. ..+..+++++.+..+ +.++|+.++.
T Consensus 196 i~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~ 275 (290)
T 3dnp_A 196 IVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFR 275 (290)
T ss_dssp EEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHH
Confidence 3445788999999999999999999999999999999999999887765533 234568999999988 8888887764
Q ss_pred c
Q 025190 229 S 229 (256)
Q Consensus 229 ~ 229 (256)
.
T Consensus 276 ~ 276 (290)
T 3dnp_A 276 M 276 (290)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.2e-17 Score=142.28 Aligned_cols=94 Identities=18% Similarity=0.241 Sum_probs=83.7
Q ss_pred CChhHHHHHHhhhcCcE---EEecCC------------hHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNSD------------RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~~------------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
++||+.++|+.|+++|+ |+||.. ...+...++.+|+. |+.+++++++..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~-------------- 151 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLN-------------- 151 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTT--------------
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCC--------------
Confidence 79999999999999987 899965 23377889999985 899999988876
Q ss_pred CCCCHHHHHHHHHHcC----CCCCcEEEEcCCc-----------------cccHHHHHcCCeEEEE
Q 025190 156 LKPSMDAMKLALHVAN----VDPRHALFLDDNI-----------------KNVTAGKALGLRTVLV 200 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~----~~~~~~i~vGDs~-----------------~Di~~a~~~G~~~v~v 200 (256)
+||+|.+|..+++++| +++++|+||||+. +|+.+|+++|+.++..
T Consensus 152 ~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~p 217 (416)
T 3zvl_A 152 RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATP 217 (416)
T ss_dssp STTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECH
T ss_pred CCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCc
Confidence 8999999999999997 9999999999997 7999999999998755
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=2e-18 Score=133.46 Aligned_cols=97 Identities=13% Similarity=0.166 Sum_probs=81.5
Q ss_pred HHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 025190 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (256)
Q Consensus 98 ~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 174 (256)
.|+.|+++|+ ++||+....++..++.+|+..+|+. .||++..+..+++++++++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~-----------------------~kpk~~~~~~~~~~~~~~~ 110 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKG-----------------------QVDKRSAYQHLKKTLGLND 110 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECS-----------------------CSSCHHHHHHHHHHHTCCG
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeC-----------------------CCChHHHHHHHHHHhCCCH
Confidence 5788888886 9999999999999999998765553 3899999999999999999
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcC
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVN 217 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~ 217 (256)
+++++|||+.+|+.+++.+|+.+++.+.. .....+++++.+..
T Consensus 111 ~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~ 154 (191)
T 3n1u_A 111 DEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTG 154 (191)
T ss_dssp GGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCT
T ss_pred HHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCC
Confidence 99999999999999999999998643322 12345889988854
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=7.9e-17 Score=124.17 Aligned_cols=108 Identities=14% Similarity=0.194 Sum_probs=88.0
Q ss_pred HHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 025190 98 LLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDP 174 (256)
Q Consensus 98 ~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 174 (256)
+|+.|+++|+ ++||+....++..++.+|+..+|+. .||++..+.++++++|+++
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~-----------------------~kpk~~~~~~~~~~~g~~~ 117 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG-----------------------QSNKLIAFSDLLEKLAIAP 117 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS-----------------------CSCSHHHHHHHHHHHTCCG
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC-----------------------CCCCHHHHHHHHHHcCCCH
Confidence 8888988886 9999999999999999998755431 5999999999999999999
Q ss_pred CcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc---hHHhHHHHHh
Q 025190 175 RHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN---LPQVVPEIWV 228 (256)
Q Consensus 175 ~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e---l~~~l~~~~~ 228 (256)
+++++|||+.+|+.+++.+|+.+++.+.. .....+++++.+..+ +.++++.++.
T Consensus 118 ~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~~ll~ 175 (188)
T 2r8e_A 118 ENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLL 175 (188)
T ss_dssp GGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999998765422 223458999998733 3355655553
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=9.9e-18 Score=136.94 Aligned_cols=74 Identities=9% Similarity=0.013 Sum_probs=50.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHHHh
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEIWV 228 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~~~ 228 (256)
.+..|+.+++.+++++|++++++++|||+.||++|++.+|+++++-+.. ..+..|++++.+..+ +..+|+.++.
T Consensus 194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~ 270 (279)
T 3mpo_A 194 RRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYAL 270 (279)
T ss_dssp SSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC----
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHHHHhc
Confidence 3556889999999999999999999999999999999999877665533 334568899888766 7777766553
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.6e-17 Score=124.05 Aligned_cols=165 Identities=13% Similarity=0.170 Sum_probs=104.4
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhhHhhhhhcCC
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRL 84 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (256)
.|+|+||+||||+|+.+.+..++.+ .+|.+..... .. |...... ++ ...+.+...+....
T Consensus 4 ~~~viFD~DGtL~Ds~~~~~~~~~~--------~~g~~~~~~~------~~--g~~~~~~--~~--~~~~~~~~~~~~~~ 63 (180)
T 3bwv_A 4 RQRIAIDMDEVLADTLGAVVKAVNE--------RADLNIKMES------LN--GKKLKHM--IP--EHEGLVMDILKEPG 63 (180)
T ss_dssp CCEEEEETBTTTBCHHHHHHHHHHH--------HSCCCCCGGG------CT--TCCC------------CHHHHHHHSTT
T ss_pred ccEEEEeCCCcccccHHHHHHHHHH--------HhCCCCCHHH------Hc--CccHHHH--CC--chHHHHHHHHhCcc
Confidence 4899999999999998877666553 4555322110 00 1100000 01 11223333332222
Q ss_pred CCCCCCCChhHHHHHHhhhcCcE---EEecC---ChH--HHHHHHHh-cCcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 85 PYDLIKPDPQLRNLLCSITQRKI---IFTNS---DRN--HAITCLKR-LEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 85 ~~~~~~~~pg~~~~l~~l~~~~~---ivs~~---~~~--~~~~~l~~-~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
......++||+.++|+.|++. + ++||+ ... .....+.. ++...+++.++++++.
T Consensus 64 ~~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~---------------- 126 (180)
T 3bwv_A 64 FFRNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN---------------- 126 (180)
T ss_dssp GGGSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG----------------
T ss_pred hhccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC----------------
Confidence 234678999999999999985 4 89988 321 22334544 5776777888875431
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-CCCCCeeeCCcCchHHhHHHH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-VGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-~~~~~~~~~~~~el~~~l~~~ 226 (256)
.+ ++|++||||.+|+. ..+| .+++++++.. ...+++++.++.||..+|..+
T Consensus 127 -------------~l----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~~~~~~~i~~~~el~~~l~~~ 178 (180)
T 3bwv_A 127 -------------II----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVYEHRFERVSGWRDVKNYFNSI 178 (180)
T ss_dssp -------------GB----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTTCCSSEEECSHHHHHHHHHHH
T ss_pred -------------ee----cccEEecCCcchHH--HhCC-CeEEeCCCcccCCCCceecCCHHHHHHHHHHh
Confidence 11 67999999999985 5689 9999986532 256889999999998887653
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.68 E-value=6.8e-16 Score=122.73 Aligned_cols=192 Identities=13% Similarity=0.065 Sum_probs=118.2
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHh--------CCCHHHHHHHHHHHHHHhhhhHHHHHHcCCCCChhh
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKC--------GFSETKASSLRVELFKAYGSTLAGLRALGYDIGADD 75 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
|+|+|+||+||||+++...+.....++++++ ++. |++....... .... +.....-.
T Consensus 2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l--~~~G~~v~i~TGR~~~~~~~~----~~~l----------~~~~~~i~ 65 (231)
T 1wr8_A 2 KIKAISIDIDGTITYPNRMIHEKALEAIRRA--ESLGIPIMLVTGNTVQFAEAA----SILI----------GTSGPVVA 65 (231)
T ss_dssp CCCEEEEESTTTTBCTTSCBCHHHHHHHHHH--HHTTCCEEEECSSCHHHHHHH----HHHH----------TCCSCEEE
T ss_pred ceeEEEEECCCCCCCCCCcCCHHHHHHHHHH--HHCCCEEEEEcCCChhHHHHH----HHHc----------CCCCeEEE
Confidence 3799999999999998877766667665543 233 4443322211 1111 11110000
Q ss_pred Hhh-h-h-hcCCCCCCCCCChhHHHHHHhhh-cC-cE--------------EEe-cCChHHHHHHHHhcCcccccceeEe
Q 025190 76 YHG-F-V-HGRLPYDLIKPDPQLRNLLCSIT-QR-KI--------------IFT-NSDRNHAITCLKRLEIADCFDQIIC 135 (256)
Q Consensus 76 ~~~-~-~-~~~~~~~~~~~~pg~~~~l~~l~-~~-~~--------------ivs-~~~~~~~~~~l~~~gl~~~f~~i~~ 135 (256)
... . + ........ .+ +.+.++++.++ +. ++ +++ +...+.++..++.++ ..|+.+ +
T Consensus 66 ~nGa~i~~~~~~~~~~-~l-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~ 140 (231)
T 1wr8_A 66 EDGGAISYKKKRIFLA-SM-DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELN--LNLVAV-D 140 (231)
T ss_dssp GGGTEEEETTEEEESC-CC-SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT--CSCEEE-E
T ss_pred eCCcEEEeCCEEEEec-cH-HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC--CcEEEE-e
Confidence 000 0 0 00000111 12 67777777776 43 32 233 336677777887765 456655 3
Q ss_pred cccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeee
Q 025190 136 FETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYAL 213 (256)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~ 213 (256)
+... . +....++||+..++++++++|++++++++|||+.||+++++.+|+.+ .+.+.. .+..+++++
T Consensus 141 ~~~~-~---------ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v-~~~~~~~~~~~~a~~v~ 209 (231)
T 1wr8_A 141 SGFA-I---------HVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKV-AVAQAPKILKENADYVT 209 (231)
T ss_dssp CSSC-E---------EEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEE-ECTTSCHHHHTTCSEEC
T ss_pred cCcE-E---------EEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE-EecCCCHHHHhhCCEEe
Confidence 3211 1 22334799999999999999999999999999999999999999984 454432 224689999
Q ss_pred CCcCc--hHHhHHHHH
Q 025190 214 ENVNN--LPQVVPEIW 227 (256)
Q Consensus 214 ~~~~e--l~~~l~~~~ 227 (256)
.+..+ +.++|+.++
T Consensus 210 ~~~~e~Gv~~~l~~~~ 225 (231)
T 1wr8_A 210 KKEYGEGGAEAIYHIL 225 (231)
T ss_dssp SSCHHHHHHHHHHHHH
T ss_pred cCCCcchHHHHHHHHH
Confidence 98877 777776654
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.7e-18 Score=138.55 Aligned_cols=112 Identities=13% Similarity=0.255 Sum_probs=94.0
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
...++||+.++|+.|++.|+ ++||.....++.+++++|+.++|+.++. ..+.
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~p-------------------------~~k~ 188 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLSP-------------------------EDKV 188 (263)
Confidence 45789999999999999987 9999999999999999999988877641 3356
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC-CCCCCCCCeee--CCcCchHHhHH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK-TVNVGEADYAL--ENVNNLPQVVP 224 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~-~~~~~~~~~~~--~~~~el~~~l~ 224 (256)
.++++++.++++|+||||+.+|+.+++.+|+.+++... ......+++++ +++.+|.+++.
T Consensus 189 ~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~ 251 (263)
T 2yj3_A 189 RIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIK 251 (263)
Confidence 78889999999999999999999999999988766532 22345689999 99999887663
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.65 E-value=6.2e-17 Score=134.01 Aligned_cols=76 Identities=12% Similarity=0.045 Sum_probs=63.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHHHh
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEIWV 228 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~~~ 228 (256)
...+.+|+.+++++++++|++++++++|||+.||++|++.+|+.+++-+.. ..+..|++++.+..+ +..+|+.++.
T Consensus 223 ~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~ 301 (304)
T 3l7y_A 223 ITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLA 301 (304)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHH
Confidence 344678889999999999999999999999999999999999877664432 234568999999888 8888877664
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=3e-17 Score=133.58 Aligned_cols=74 Identities=9% Similarity=-0.007 Sum_probs=60.1
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
...+++|+.+++++++++|++++++++|||+.||++|++.+|+.+++-+.. ..+..+++++.+..+ +..+|+.+
T Consensus 195 ~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 195 IQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp EETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred eeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence 334789999999999999999999999999999999999999877765433 233568999988876 55666543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.8e-17 Score=134.26 Aligned_cols=76 Identities=5% Similarity=0.113 Sum_probs=63.3
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
+....++||+.+++++++++|++++++++|||+.||+++++.+|+.+++.+.. ..+..+++++.+..+ +.++|+.+
T Consensus 180 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 180 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred EecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 44667899999999999999999999999999999999999999976653221 122458999999999 88888764
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.5e-16 Score=118.86 Aligned_cols=104 Identities=10% Similarity=0.154 Sum_probs=79.9
Q ss_pred HHHhhhcCcE---EEecCChHHHHHHHH--hcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCC
Q 025190 98 LLCSITQRKI---IFTNSDRNHAITCLK--RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANV 172 (256)
Q Consensus 98 ~l~~l~~~~~---ivs~~~~~~~~~~l~--~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 172 (256)
.|+.|+++|+ ++|+. ..++..++ .+|+. ++. + .++|+..++++++++++
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-----~~~----g---------------~~~K~~~l~~~~~~~gi 97 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-----TEV----S---------------VSDKLATVDEWRKEMGL 97 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-----EEC----S---------------CSCHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-----EEE----C---------------CCChHHHHHHHHHHcCc
Confidence 6888888887 88888 67888899 55543 232 1 47788999999999999
Q ss_pred CCCcEEEEcCCccccHHHHHcCCeEEEEcC-CCCCCCCCeeeCCcCc---hHHhHHHHH
Q 025190 173 DPRHALFLDDNIKNVTAGKALGLRTVLVGK-TVNVGEADYALENVNN---LPQVVPEIW 227 (256)
Q Consensus 173 ~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~-~~~~~~~~~~~~~~~e---l~~~l~~~~ 227 (256)
+++++++|||+.||+++++.+|+.+++.+. ...+..+++++.+..+ +.++++.++
T Consensus 98 ~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~G~~~~~~~~il 156 (168)
T 3ewi_A 98 CWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGRGAIREFAEHIF 156 (168)
T ss_dssp CGGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTTTHHHHHHHHHH
T ss_pred ChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCccHHHHHHHHHH
Confidence 999999999999999999999999764332 2234678999887654 445555554
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.59 E-value=7.8e-16 Score=126.19 Aligned_cols=75 Identities=5% Similarity=0.050 Sum_probs=58.1
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-CCCCCC--eeeCCcCc--hHHhHHHHH
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-NVGEAD--YALENVNN--LPQVVPEIW 227 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-~~~~~~--~~~~~~~e--l~~~l~~~~ 227 (256)
...+.+|+.+++++++.+|++++++++|||+.||++|++.+|+.+++-+... .+..++ +++.+..+ +..+|+.++
T Consensus 204 ~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 204 MAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence 3346788999999999999999999999999999999999998777665432 233354 46666665 666776654
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-15 Score=122.98 Aligned_cols=75 Identities=8% Similarity=0.135 Sum_probs=59.7
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
....+-.|..+++++++.+|++++++++|||+.||++|++.+|+++++-+.. ..+..+++++.+..+ +...|+.+
T Consensus 177 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~~ 254 (258)
T 2pq0_A 177 VLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQL 254 (258)
T ss_dssp EEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHHT
T ss_pred EEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHHh
Confidence 3445667889999999999999999999999999999999999988864322 223568999988776 66666554
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.58 E-value=3.5e-16 Score=128.15 Aligned_cols=74 Identities=9% Similarity=0.099 Sum_probs=61.0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
...+.+|+.+++++++++|++++++++|||+.||++|++.+|+.+++-+.. ..+..|++++.+..+ +..+|+.+
T Consensus 206 ~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 206 NAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred eeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence 344678899999999999999999999999999999999999877765433 234568999998887 77777654
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-15 Score=123.31 Aligned_cols=76 Identities=16% Similarity=0.173 Sum_probs=61.4
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
+....+.+|+.+++++++++|++++++++|||+.||++|++.+|+.+++-+.. ..+..|++++.+..+ +..+|+.+
T Consensus 187 ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~ 265 (268)
T 3r4c_A 187 DVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHF 265 (268)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred EEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence 34445778899999999999999999999999999999999999887765533 234568999998877 66666543
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.6e-14 Score=116.41 Aligned_cols=96 Identities=13% Similarity=0.130 Sum_probs=72.6
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCC---hHHHHHHHHhcCcc--cccceeEecccCCcccccCCCCCCCCCCCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKRLEIA--DCFDQIICFETMNPNLSKATRPDEFPVLLKPS 159 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~---~~~~~~~l~~~gl~--~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~ 159 (256)
...++||+.++|+.|+++|+ ++||+. ...+...|+.+|+. .+++.+++.+.. .||.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~----------------~K~~ 162 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE----------------KGKE 162 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC----------------CSSH
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC----------------CCcH
Confidence 45789999999999999986 899987 55677788999998 677777765432 3664
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCccccHHHH-------H---------cCCeEEEEcCCC
Q 025190 160 MDAMKLALHVANVDPRHALFLDDNIKNVTAGK-------A---------LGLRTVLVGKTV 204 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~-------~---------~G~~~v~v~~~~ 204 (256)
+ ...++ ..+. ..+++|||+.+|+.+|+ + +|++++.++++.
T Consensus 163 ~--~~~~~-~~~~--~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~ 218 (258)
T 2i33_A 163 K--RRELV-SQTH--DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPM 218 (258)
T ss_dssp H--HHHHH-HHHE--EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred H--HHHHH-HhCC--CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCC
Confidence 3 33333 2333 34899999999999983 4 799999997764
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1.5e-14 Score=117.67 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=60.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeCCcCc--hHHhHHHHHh
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALENVNN--LPQVVPEIWV 228 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~~~~e--l~~~l~~~~~ 228 (256)
.+++|+.+++++++++|++++++++|||+.||+++++.+|+.++ +++.. .+..+++++.+..+ +.++|+.++.
T Consensus 188 ~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va-~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~ 264 (271)
T 1rlm_A 188 PGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA-MGNAAENIKQIARYATDDNNHEGALNVIQAVLD 264 (271)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-CTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEE-eCCccHHHHHhCCeeCcCCCCChHHHHHHHHHh
Confidence 47899999999999999999999999999999999999999765 43332 22458999988876 7777877664
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.8e-14 Score=117.86 Aligned_cols=78 Identities=10% Similarity=0.120 Sum_probs=61.3
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeCCcCc--hHHhHHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
+....+-+|+.+++++++++|++++++++|||+.||+++++.+|+.++ +++.. .+..+++++.+..+ +.++|+.+
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~ 269 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVA-VDNAIPSVKEVANFVTKSNLEDGVAFAIEKY 269 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTSCHHHHHHCSEECCCTTTTHHHHHHHHH
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEE-ecCCcHHHHhhCCEEecCCCcchHHHHHHHH
Confidence 334446688899999999999999999999999999999999998544 44332 22358999988776 88888776
Q ss_pred Hhc
Q 025190 227 WVS 229 (256)
Q Consensus 227 ~~~ 229 (256)
+..
T Consensus 270 ~~~ 272 (282)
T 1rkq_A 270 VLN 272 (282)
T ss_dssp TTC
T ss_pred Hhc
Confidence 533
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.43 E-value=9.5e-14 Score=110.02 Aligned_cols=72 Identities=7% Similarity=0.012 Sum_probs=56.9
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeCCcCc--hHHhHHHH
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
+.+.+|+..+++++++++++++++++|||+.||+++++.+|+.++ +++.. .+..+++++.+..+ +.++|+.+
T Consensus 149 ~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va-~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~~~ 224 (227)
T 1l6r_A 149 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKAC-PANATDNIKAVSDFVSDYSYGEEIGQIFKHF 224 (227)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEE-CTTSCHHHHHHCSEECSCCTTHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEE-ecCchHHHHHhCCEEecCCCCcHHHHHHHHH
Confidence 446788899999999999999999999999999999999998754 44332 12358899888765 56666554
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.4e-12 Score=109.48 Aligned_cols=73 Identities=18% Similarity=0.176 Sum_probs=60.7
Q ss_pred CCCCCCCCHHHHHHHHHHc----------------------C-----CCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCC
Q 025190 152 FPVLLKPSMDAMKLALHVA----------------------N-----VDPRHALFLDDNI-KNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~----------------------~-----~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~ 203 (256)
....+||.+.+|+.+++.+ | .+++++++|||++ +||.+|+++|+.+++|.++
T Consensus 241 ~~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G 320 (352)
T 3kc2_A 241 DYTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTG 320 (352)
T ss_dssp CEECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSS
T ss_pred ceEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccC
Confidence 3679999999999887654 2 2679999999999 6999999999999999875
Q ss_pred C-------CCCCCCeeeCCcCchHHhHH
Q 025190 204 V-------NVGEADYALENVNNLPQVVP 224 (256)
Q Consensus 204 ~-------~~~~~~~~~~~~~el~~~l~ 224 (256)
. ....|+++++++.+|.++|.
T Consensus 321 ~~~~~~~~~~~~pd~vi~~l~el~~~il 348 (352)
T 3kc2_A 321 VYNEGDDLKECKPTLIVNDVFDAVTKTL 348 (352)
T ss_dssp SCCTTCCCTTCCCSEECSSHHHHHHHHH
T ss_pred CCCcccccccCCCCEEECCHHHHHHHHH
Confidence 3 13569999999999888764
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.41 E-value=2.3e-13 Score=111.59 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=57.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC--CCCCCeeeCCcCc--hHHhHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN--VGEADYALENVNN--LPQVVPE 225 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~--~~~~~~~~~~~~e--l~~~l~~ 225 (256)
+....+-.|..+++.+++.+|++++++++|||+.||++|++.+|+. +.+++... +..+++++.+..+ +.+.|+.
T Consensus 209 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 209 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKG-VAMGNAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEE-EECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcE-EEEcCCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 3445566788999999999999999999999999999999999995 44544322 2348888887765 5555543
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.40 E-value=5.4e-13 Score=110.07 Aligned_cols=98 Identities=9% Similarity=-0.003 Sum_probs=83.1
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChH---HHHHHHHh--------cCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKR--------LEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~---~~~~~l~~--------~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
..++||+.++|+.|+++|+ ++||.... .+...+++ +|+ +|+.++++++..
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~-------------- 250 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGD-------------- 250 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTC--------------
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCC--------------
Confidence 4679999999999999986 88988644 34566777 888 488888876543
Q ss_pred CCCCCHHHHHHHHHHcCCCCCc-EEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 155 LLKPSMDAMKLALHVANVDPRH-ALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~-~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
.||+|..+..++++++.++.+ +++|||+.+|+.+|+++|+.+++|.++
T Consensus 251 -~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 251 -TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp -CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred -CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 699999999999999887655 799999999999999999999999876
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.7e-13 Score=110.59 Aligned_cols=75 Identities=13% Similarity=0.007 Sum_probs=59.1
Q ss_pred CCCCCCCHHHHHHHHHHcCCCC--CcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCc--hHHhHHHHHh
Q 025190 153 PVLLKPSMDAMKLALHVANVDP--RHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNN--LPQVVPEIWV 228 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~--~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~e--l~~~l~~~~~ 228 (256)
... ++|+.+++++++++|+++ +++++|||+.||+.|++.+|+.+++-+... ..++++..+..+ +.++|+.++.
T Consensus 172 ~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~~~~~~~~~~~~~gv~~~~~~~~~ 248 (259)
T 3zx4_A 172 AKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--PEGVLATPAPGPEGFRYAVERYLL 248 (259)
T ss_dssp ESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--CTTCEECSSCHHHHHHHHHHHHTT
T ss_pred cCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--cCCcEEeCCCCchHHHHHHHHHHH
Confidence 344 788999999999999998 999999999999999999998876655444 367788766544 5666766664
Q ss_pred cC
Q 025190 229 SQ 230 (256)
Q Consensus 229 ~~ 230 (256)
..
T Consensus 249 ~~ 250 (259)
T 3zx4_A 249 PR 250 (259)
T ss_dssp TC
T ss_pred hC
Confidence 33
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.31 E-value=5e-13 Score=111.83 Aligned_cols=56 Identities=13% Similarity=0.145 Sum_probs=43.4
Q ss_pred CCCCCc----EEEEcCCccccHHHHHc----CCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHHH
Q 025190 171 NVDPRH----ALFLDDNIKNVTAGKAL----GLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEIW 227 (256)
Q Consensus 171 ~~~~~~----~i~vGDs~~Di~~a~~~----G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~~ 227 (256)
++++++ |++|||+.||++|++.+ |+.+++ +.. ..+..+++++.+..+ +..+|+.++
T Consensus 214 gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~ 280 (332)
T 1y8a_A 214 GYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALKHADVVIISPTAMSEAKVIELFM 280 (332)
T ss_dssp HHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHTTCSEEEECSSTHHHHHHHHHHH
T ss_pred ccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHhhCcEEecCCCCCHHHHHHHHHH
Confidence 677788 99999999999999999 998776 532 233568999887544 667776655
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.30 E-value=9.4e-13 Score=108.69 Aligned_cols=77 Identities=12% Similarity=0.168 Sum_probs=60.5
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeC-CcCc--hHHhHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALE-NVNN--LPQVVPE 225 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~-~~~e--l~~~l~~ 225 (256)
+....+-+|+.+++.+++.+|++++++++|||+.||++|++.+|+.++ +++.. .+..+++++. +..+ +.++|+.
T Consensus 217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-VANATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-CTTCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE-EcCCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 334456688899999999999999999999999999999999999754 44332 2235889988 7665 7777777
Q ss_pred HHh
Q 025190 226 IWV 228 (256)
Q Consensus 226 ~~~ 228 (256)
++.
T Consensus 296 ~~~ 298 (301)
T 2b30_A 296 VFD 298 (301)
T ss_dssp HHT
T ss_pred HHh
Confidence 653
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.8e-13 Score=109.92 Aligned_cols=72 Identities=15% Similarity=0.120 Sum_probs=55.9
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC-CCCCCCeeeCCcCc--hHHhHHHH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV-NVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~-~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
.+.+|+.+++++++.+|++++++++|||+.||+++++.+|+.+++.+... .+..+++++.+..+ +.++|+.+
T Consensus 187 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~ 261 (268)
T 1nf2_A 187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERI 261 (268)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTB
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHHHH
Confidence 36688899999999999999999999999999999999999765433211 12348899887665 55555544
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.24 E-value=3.3e-11 Score=96.31 Aligned_cols=83 Identities=12% Similarity=0.104 Sum_probs=62.1
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCCh----HHHHHHHHhcCcccccc-eeEecccCCcccccCCCCCCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDR----NHAITCLKRLEIADCFD-QIICFETMNPNLSKATRPDEFPVLLKP 158 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~----~~~~~~l~~~gl~~~f~-~i~~~~~~~~~~~~~~~~~~~~~~~Kp 158 (256)
....++||+.++++.|+++|+ +||+... +.+...|+.+|+..+++ .++.... ...
T Consensus 98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~-----------------~~~ 160 (262)
T 3ocu_A 98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKD-----------------KSA 160 (262)
T ss_dssp TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESS-----------------CSC
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCC-----------------CCC
Confidence 456899999999999999997 8998754 58888999999987663 4554332 133
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHH
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTA 189 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~ 189 (256)
|......+.++ |. ..+++|||..+|+.+
T Consensus 161 K~~~r~~l~~~-Gy--~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 161 KAARFAEIEKQ-GY--EIVLYVGDNLDDFGN 188 (262)
T ss_dssp CHHHHHHHHHT-TE--EEEEEEESSGGGGCS
T ss_pred hHHHHHHHHhc-CC--CEEEEECCChHHhcc
Confidence 44666666655 33 239999999999997
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.21 E-value=6.6e-11 Score=94.46 Aligned_cols=97 Identities=13% Similarity=0.151 Sum_probs=68.3
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCCh----HHHHHHHHhcCcccccc-eeEecccCCcccccCCCCCCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDR----NHAITCLKRLEIADCFD-QIICFETMNPNLSKATRPDEFPVLLKP 158 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~----~~~~~~l~~~gl~~~f~-~i~~~~~~~~~~~~~~~~~~~~~~~Kp 158 (256)
....++||+.++|+.|+++|+ ++|+... +.+...|+.+|+..+++ .++...+ ...
T Consensus 98 g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~-----------------~~~ 160 (260)
T 3pct_A 98 RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKD-----------------KSN 160 (260)
T ss_dssp TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESS-----------------CSS
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCC-----------------CCC
Confidence 456899999999999999987 8998854 58888999999987664 4444322 122
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHH--------HHH---------cCCeEEEEcCC
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTA--------GKA---------LGLRTVLVGKT 203 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~--------a~~---------~G~~~v~v~~~ 203 (256)
|......+. +.|. .-+++|||+.+|+.+ +++ .|-+.+.++++
T Consensus 161 K~~~r~~L~-~~gy--~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp 219 (260)
T 3pct_A 161 KSVRFKQVE-DMGY--DIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNT 219 (260)
T ss_dssp SHHHHHHHH-TTTC--EEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCC
T ss_pred hHHHHHHHH-hcCC--CEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 334444444 4344 349999999999998 333 46667766554
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.3e-09 Score=89.61 Aligned_cols=107 Identities=10% Similarity=0.077 Sum_probs=68.5
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCC--cccccCCCCCCCCCCCCCCHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMN--PNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~--~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
..+++.||+.++++.|+++|+ ++|++....++.+++.+|+......+++..... ..+..+..........|+.+.
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~ 217 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 217 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence 467899999999999999987 999999999999999999864322333221100 000111111112223444333
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCccccHHHHHc
Q 025190 162 AMKLALHVANVDPRHALFLDDNIKNVTAGKAL 193 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 193 (256)
.-......+.-+..+++++|||.||+.|++.+
T Consensus 218 ~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l 249 (297)
T 4fe3_A 218 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGV 249 (297)
T ss_dssp HTCHHHHHHTTTCCEEEEEESSGGGGGTTTTC
T ss_pred HHHHHHHHhhccCCEEEEEeCcHHHHHHHhCc
Confidence 32233334445667899999999999998744
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.06 E-value=9e-12 Score=96.03 Aligned_cols=122 Identities=11% Similarity=0.037 Sum_probs=91.3
Q ss_pred CCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
..++||+.+||+.|++.. + |+|++....++.+++.++...+|+.+++.+++.. .| ..+.+.
T Consensus 67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~--------------~k---~~~lK~ 129 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVF--------------HR---GNYVKD 129 (195)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEE--------------ET---TEEECC
T ss_pred EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEccccee--------------cC---Cceeee
Confidence 567899999999999872 2 9999999999999999999999999999887764 23 456778
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHHHhcCCCCC
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEIWVSQSDDG 234 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~~~~ 234 (256)
++.+|.++++|++|||+..++.++.++|+.++.+... ..| ..+.+|..+|+.+......+|
T Consensus 130 L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~~~----~~D---~eL~~L~~~L~~l~~~~~~~~ 190 (195)
T 2hhl_A 130 LSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDD----MTD---TELLDLIPFFEGLSREDDEGH 190 (195)
T ss_dssp GGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCSSC----TTC---CHHHHHHHHHHHHHC------
T ss_pred HhHhCCChhHEEEEECCHHHhhhCccCccEEeeecCC----CCh---HHHHHHHHHHHHHHhCcCccc
Confidence 8899999999999999999999999999887544321 111 123345555666554444443
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=99.00 E-value=5.6e-10 Score=94.80 Aligned_cols=105 Identities=10% Similarity=0.038 Sum_probs=68.5
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc--ceeEecccC--CcccccC-CCCCCCCCCCCCCH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF--DQIICFETM--NPNLSKA-TRPDEFPVLLKPSM 160 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~--~~~~~~~-~~~~~~~~~~Kp~~ 160 (256)
++++||++++++.|+++|+ |||++....++.+.+.+|+.--+ +.|++..-. ..+.+.+ ..+..+...+.-|+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~ 299 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKV 299 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHH
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchH
Confidence 3479999999999999997 99999999999999998864211 334432210 0001111 11112233344455
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcC
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALG 194 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G 194 (256)
..++.++.. ......++++|||.+|+.|.+..+
T Consensus 300 ~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~ 332 (385)
T 4gxt_A 300 QTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFD 332 (385)
T ss_dssp HHHHHHTCC-TTEECCSEEEECSGGGHHHHHHCT
T ss_pred HHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCc
Confidence 666665543 244456999999999999999854
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.92 E-value=7.1e-10 Score=90.16 Aligned_cols=76 Identities=9% Similarity=0.032 Sum_probs=44.2
Q ss_pred CCCCCCCCCHHHHHHHHHHcC-CCCCc--EEEEcCCccccHHHHHcCCeEEEEcCCC---CC--C--CCC-eeeCCcCc-
Q 025190 151 EFPVLLKPSMDAMKLALHVAN-VDPRH--ALFLDDNIKNVTAGKALGLRTVLVGKTV---NV--G--EAD-YALENVNN- 218 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~-~~~~~--~i~vGDs~~Di~~a~~~G~~~v~v~~~~---~~--~--~~~-~~~~~~~e- 218 (256)
+....+-+|+.+++++++.+| +++++ +++|||+.||++|++.+|+. +.+++.. .. . .++ +++.+..+
T Consensus 182 eI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~~d 260 (275)
T 1xvi_A 182 HVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREGPE 260 (275)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC-----------------------
T ss_pred EEecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCCch
Confidence 444456788899999999999 99999 99999999999999999986 4444332 22 1 367 77766554
Q ss_pred -hHHhHHHHH
Q 025190 219 -LPQVVPEIW 227 (256)
Q Consensus 219 -l~~~l~~~~ 227 (256)
+.++|+.++
T Consensus 261 GVa~~l~~~l 270 (275)
T 1xvi_A 261 GWREGLDHFF 270 (275)
T ss_dssp ----------
T ss_pred HHHHHHHHHH
Confidence 556665554
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.87 E-value=1.5e-10 Score=88.22 Aligned_cols=93 Identities=16% Similarity=0.104 Sum_probs=80.6
Q ss_pred CCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
..++||+.+||+.+++.. + |+|++....++.+++.++...+|+.+++.+++.. .| ..+.+.
T Consensus 54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~--------------~k---~~~~k~ 116 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF--------------HR---GNYVKD 116 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEE--------------ET---TEEECC
T ss_pred EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCcee--------------cC---CcEecc
Confidence 578999999999999862 2 9999999999999999999999999998887653 12 346677
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
++.+|.++++|++|||+..++.++..+|+.+.
T Consensus 117 L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~ 148 (181)
T 2ght_A 117 LSRLGRDLRRVLILDNSPASYVFHPDNAVPVA 148 (181)
T ss_dssp GGGTCSCGGGEEEECSCGGGGTTCTTSBCCCC
T ss_pred HHHhCCCcceEEEEeCCHHHhccCcCCEeEec
Confidence 88899999999999999999999999999853
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.62 E-value=9.9e-08 Score=86.38 Aligned_cols=109 Identities=13% Similarity=0.198 Sum_probs=83.4
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
++.|++.+.++.|++.|+ ++|+.....++.+.+.+|++.++..+. ++.|...++.+
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~---------------------P~~K~~~v~~l 515 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL---------------------PHQKSEEVKKL 515 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC---------------------TTCHHHHHHHH
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeCC---------------------HHhHHHHHHHH
Confidence 688999999999999997 899999999999999999864332221 34545555554
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc-CCCCCCCCCeee--CCcCchHHhHH
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG-KTVNVGEADYAL--ENVNNLPQVVP 224 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~-~~~~~~~~~~~~--~~~~el~~~l~ 224 (256)
.+ . +++++|||+.||+.+.+.+|++.++-+ .......+|+++ +++..+.+.+.
T Consensus 516 ~~----~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~ 571 (645)
T 3j08_A 516 QA----K-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 571 (645)
T ss_dssp TT----T-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHH
T ss_pred hh----C-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence 33 3 789999999999999999998876653 233456789998 67777776553
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1e-07 Score=82.91 Aligned_cols=113 Identities=20% Similarity=0.217 Sum_probs=80.9
Q ss_pred CCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhc-Cc-------------ccccceeEecccCCcccccCCCCC--
Q 025190 89 IKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRL-EI-------------ADCFDQIICFETMNPNLSKATRPD-- 150 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~-gl-------------~~~f~~i~~~~~~~~~~~~~~~~~-- 150 (256)
+...|++..+|++|++.|. ++||+....+...++.+ |. .++||.|++... .+.-|+..+.-
T Consensus 245 v~kdp~l~~~L~~Lr~~GKlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~-KP~FF~~~~pfr~ 323 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDAR-KPLFFGEGTVLRQ 323 (555)
T ss_dssp BCCCTHHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCC-TTGGGTTCCCEEE
T ss_pred cCCChHHHHHHHHHHHcCCEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCC-CCCcccCCCcceE
Confidence 5677899999999999874 99999999999999987 63 368898666432 22122210000
Q ss_pred -----------CCCCCCCCCHHH-----HHHHHHHcCCCCCcEEEEcCCc-cccHHHH-HcCCeEEEEcCC
Q 025190 151 -----------EFPVLLKPSMDA-----MKLALHVANVDPRHALFLDDNI-KNVTAGK-ALGLRTVLVGKT 203 (256)
Q Consensus 151 -----------~~~~~~Kp~~~~-----~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~-~~G~~~v~v~~~ 203 (256)
.....-+ +... +..+++.+|+..++++||||.. .||..++ .+|+.+++|-..
T Consensus 324 Vd~~tg~l~~~~~~~~l~-~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE 393 (555)
T 2jc9_A 324 VDTKTGKLKIGTYTGPLQ-HGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE 393 (555)
T ss_dssp EETTTTEECSSCCCSCCC-TTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred eecCCCcccccccccccc-CCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence 0000000 0111 4888899999999999999999 8999997 899999999654
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.46 E-value=4.1e-07 Score=83.46 Aligned_cols=109 Identities=13% Similarity=0.180 Sum_probs=82.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
++.|++.+.++.|++.|+ ++|+.....++.+.+.+|++.++..+ . +..|...++.+
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~------~---------------P~~K~~~v~~l 593 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEV------L---------------PHQKSEEVKKL 593 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSC------C---------------TTCHHHHHHHH
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccC------C---------------HHHHHHHHHHH
Confidence 688999999999999997 89999999999999999986433221 1 34444555544
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc-CCCCCCCCCeee--CCcCchHHhHH
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG-KTVNVGEADYAL--ENVNNLPQVVP 224 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~-~~~~~~~~~~~~--~~~~el~~~l~ 224 (256)
.+ . +++++|||+.||+.+.+.+|++.++-+ .......+|+++ +++..+.+.+.
T Consensus 594 ~~----~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 594 QA----K-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp TT----T-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHH
T ss_pred hc----C-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHH
Confidence 33 3 789999999999999999998766543 233456799998 66777766553
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=98.39 E-value=5.8e-06 Score=71.11 Aligned_cols=115 Identities=17% Similarity=0.161 Sum_probs=78.5
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc---------CcccccceeEecccCCcccccCCC--------
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---------EIADCFDQIICFETMNPNLSKATR-------- 148 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~---------gl~~~f~~i~~~~~~~~~~~~~~~-------- 148 (256)
+...|.+..+|++|++.|. ++||+.-..+...+..+ ...++||.|++... .+.-|...+
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~-KP~FF~~~~~~~~v~~~ 263 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLAN-KPRFFYDNLRFLSVNPE 263 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCC-TTHHHHSCCCEEEECTT
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCC-CCCcccCCCcceEEECC
Confidence 4557899999999999985 99999999998888864 24579999888653 222221100
Q ss_pred -CC--CCCCCCCCC---HHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHH-cCCeEEEEcCCC
Q 025190 149 -PD--EFPVLLKPS---MDAMKLALHVANVDPRHALFLDDNI-KNVTAGKA-LGLRTVLVGKTV 204 (256)
Q Consensus 149 -~~--~~~~~~Kp~---~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~-~G~~~v~v~~~~ 204 (256)
+. ......+|. ..-...+.+.+|....+|+||||+. .||..+++ .|+.|+.|-...
T Consensus 264 ~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL 327 (470)
T 4g63_A 264 NGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL 327 (470)
T ss_dssp TCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTTH
T ss_pred CCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHHH
Confidence 00 000111110 1225566777899888999999999 89776665 699999996553
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=8e-06 Score=67.67 Aligned_cols=36 Identities=8% Similarity=0.055 Sum_probs=32.7
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL 124 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~ 124 (256)
..++|+..++++.|+.+|+ |||++....++.+.+.+
T Consensus 142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 4689999999999999997 99999999999998874
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=1.6e-07 Score=74.89 Aligned_cols=43 Identities=9% Similarity=-0.070 Sum_probs=34.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCC----ccccHHHHHcCCeEEEEc
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDN----IKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs----~~Di~~a~~~G~~~v~v~ 201 (256)
.+-.|..+++++++ +++++++|||+ .||++|.+.+|...+.+.
T Consensus 184 ~gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~ 230 (246)
T 3f9r_A 184 VGWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT 230 (246)
T ss_dssp TTCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS
T ss_pred CCCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC
Confidence 35566688888887 88999999995 999999998886555553
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.11 E-value=1.7e-06 Score=79.23 Aligned_cols=109 Identities=11% Similarity=0.099 Sum_probs=79.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
++.|++.+.++.|++.|+ ++|+.....++.+.+.+|+++++.. -.|+-...+
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~-------------------------~~P~~K~~~ 608 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAE-------------------------IMPEDKSRI 608 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECS-------------------------CCHHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEe-------------------------cCHHHHHHH
Confidence 677999999999999987 8999999999999999998643221 112333344
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeee--CCcCchHHhH
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYAL--ENVNNLPQVV 223 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~--~~~~el~~~l 223 (256)
+++++-..+.+++|||+.||+.+.+.++++.++-+.. .....+|+++ .++..+...+
T Consensus 609 v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai 668 (736)
T 3rfu_A 609 VSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKAR 668 (736)
T ss_dssp HHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHH
T ss_pred HHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHH
Confidence 4444334567999999999999999999887765322 2235588887 5566666544
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.03 E-value=1.7e-06 Score=72.70 Aligned_cols=80 Identities=20% Similarity=0.253 Sum_probs=60.9
Q ss_pred CCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCccc-ccc-eeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIAD-CFD-QIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~-~f~-~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.+...||+.+||+.+++.. + |.|.+....+..+++.++... +|+ .+++.+.++. ...|.
T Consensus 73 ~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~------------~~~Kd----- 135 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS------------LAQKS----- 135 (372)
T ss_dssp EEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSC------------SSCCC-----
T ss_pred EEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCC------------cceec-----
Confidence 4577899999999999542 2 899999999999999999887 786 6776655432 01232
Q ss_pred HHHHHH-cCCCCCcEEEEcCCcccc
Q 025190 164 KLALHV-ANVDPRHALFLDDNIKNV 187 (256)
Q Consensus 164 ~~~~~~-~~~~~~~~i~vGDs~~Di 187 (256)
++. +|.++++||+|+|++.-.
T Consensus 136 ---L~~L~~~dl~~viiiDd~~~~~ 157 (372)
T 3ef0_A 136 ---LRRLFPCDTSMVVVIDDRGDVW 157 (372)
T ss_dssp ---GGGTCSSCCTTEEEEESCSGGG
T ss_pred ---HHHhcCCCCceEEEEeCCHHHc
Confidence 444 388999999999999543
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.01 E-value=7.2e-06 Score=77.89 Aligned_cols=122 Identities=12% Similarity=0.124 Sum_probs=81.5
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc----ceeEecccCCcc-------------cccCCCC
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF----DQIICFETMNPN-------------LSKATRP 149 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f----~~i~~~~~~~~~-------------~~~~~~~ 149 (256)
++.|++.+.++.|++.|+ ++|+.....+..+.+.+|+.... +.++++++.... +|.
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~---- 678 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFA---- 678 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEE----
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEE----
Confidence 678999999999999997 89999999999999999996532 223333221100 000
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeC--CcCchHHhH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALE--NVNNLPQVV 223 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~--~~~el~~~l 223 (256)
...| +-...+.+.++-..+.++++||+.||+.+.+.++++.++- .+. .+..+|+++. ++..+.+.+
T Consensus 679 -----r~~P--~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i 748 (995)
T 3ar4_A 679 -----RVEP--SHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAV 748 (995)
T ss_dssp -----SCCS--SHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHH
T ss_pred -----EeCH--HHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHH
Confidence 0123 2222333333333478999999999999999999988764 332 2356898884 466665544
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.3e-06 Score=69.57 Aligned_cols=72 Identities=7% Similarity=0.091 Sum_probs=54.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC--CC-------CCCeeeCCcCc--hHH
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN--VG-------EADYALENVNN--LPQ 221 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~--~~-------~~~~~~~~~~e--l~~ 221 (256)
...+-+|+.+++++++++|++++++++|||+.||++|++.+|+.+++ ++... +. .+++++.+..+ +.+
T Consensus 157 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~-~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~ 235 (244)
T 1s2o_A 157 LPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV-RNAQPELLHWYDQWGDSRHYRAQSSHAGAILE 235 (244)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC-TTCCHHHHHHHHHHCCTTEEECSSCHHHHHHH
T ss_pred ccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEE-cCCcHHHHHHHhcccccceeecCCcchhHHHH
Confidence 33467888999999999999999999999999999999999986444 43321 12 26788877655 455
Q ss_pred hHHH
Q 025190 222 VVPE 225 (256)
Q Consensus 222 ~l~~ 225 (256)
.|+.
T Consensus 236 ~i~~ 239 (244)
T 1s2o_A 236 AIAH 239 (244)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.93 E-value=1.6e-05 Score=57.42 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=26.9
Q ss_pred CChhHHHHHHhhhcCcE---EEecCC---hHHHHHHHHhcCcc
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLKRLEIA 127 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~~---~~~~~~~l~~~gl~ 127 (256)
+.|++.+.|++|+++|+ ++|+.. ...+...++.+|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 44689999999999986 777776 34455566677764
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.81 E-value=1.8e-06 Score=68.81 Aligned_cols=50 Identities=8% Similarity=-0.021 Sum_probs=43.2
Q ss_pred CCCCCCCCCHHHHHHHHHHcCC-CCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 151 EFPVLLKPSMDAMKLALHVANV-DPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~-~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
+... +-.|..+++++++.+++ +++++++|||+.||++|++.+|+..++-+
T Consensus 173 ei~~-g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gn 223 (249)
T 2zos_A 173 TVHG-NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGS 223 (249)
T ss_dssp EEEC-SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESS
T ss_pred EEeC-CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCC
Confidence 4455 67788999999999998 99999999999999999999998765543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.73 E-value=1.9e-05 Score=62.44 Aligned_cols=70 Identities=13% Similarity=0.080 Sum_probs=56.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHc--CCeEEEEcCCCCCCCCCeeeCC---cCchHHhHHHHHh
Q 025190 154 VLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKAL--GLRTVLVGKTVNVGEADYALEN---VNNLPQVVPEIWV 228 (256)
Q Consensus 154 ~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~--G~~~v~v~~~~~~~~~~~~~~~---~~el~~~l~~~~~ 228 (256)
..+-.|..+++++++++| +++|||+.||++|.+.+ |...++-+. +..+++++.+ -..+.++|+.++.
T Consensus 156 ~~~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~Na---~~~A~~v~~~~~~~~gV~~~l~~~~~ 227 (239)
T 1u02_A 156 VPGVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVGEG---ETHAKFHVADYIEMRKILKFIEMLGV 227 (239)
T ss_dssp CTTCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEESSS---CCCCSEEESSHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEECCC---CCcceEEeCCCCCHHHHHHHHHHHHH
Confidence 345678899999999998 99999999999999999 987776654 4678999888 5557778877654
Q ss_pred cCC
Q 025190 229 SQS 231 (256)
Q Consensus 229 ~~~ 231 (256)
...
T Consensus 228 ~~~ 230 (239)
T 1u02_A 228 QKK 230 (239)
T ss_dssp HHC
T ss_pred hcc
Confidence 433
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.72 E-value=4.9e-05 Score=72.40 Aligned_cols=133 Identities=11% Similarity=0.017 Sum_probs=80.8
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc------------------------ceeEecccCCcc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF------------------------DQIICFETMNPN 142 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f------------------------~~i~~~~~~~~~ 142 (256)
++.|++.+.++.|++.|+ ++|+.....+..+.+.+|+...- ..+++++.....
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~ 678 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL 678 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence 678999999999999997 89999999999999999986310 112222211000
Q ss_pred c---ccC--CCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeCC
Q 025190 143 L---SKA--TRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALEN 215 (256)
Q Consensus 143 ~---~~~--~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~~ 215 (256)
. +.. ..+ ....+.+..|.-...+.+.++-..+.++++||+.||+.|.+.++++.++-..+. .+..+|+++.+
T Consensus 679 ~~~~l~~~~~~~-~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~ 757 (1028)
T 2zxe_A 679 STEVLDDILHYH-TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLD 757 (1028)
T ss_dssp CHHHHHHHHHHC-SEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETT
T ss_pred CHHHHHHHHhhC-CcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecC
Confidence 0 000 000 000122333443333333332223679999999999999999999988643333 23458888755
Q ss_pred --cCchHHhH
Q 025190 216 --VNNLPQVV 223 (256)
Q Consensus 216 --~~el~~~l 223 (256)
+..+.+.+
T Consensus 758 ~~~~~I~~~i 767 (1028)
T 2zxe_A 758 DNFASIVTGV 767 (1028)
T ss_dssp CCTHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 44444433
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00014 Score=69.39 Aligned_cols=128 Identities=13% Similarity=0.007 Sum_probs=78.3
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc------------------------ceeEecccCCcc
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF------------------------DQIICFETMNPN 142 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f------------------------~~i~~~~~~~~~ 142 (256)
++.|++.+.++.|++.|+ ++|+.....+..+.+.+|+...- ..++.+......
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 683 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM 683 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC
Confidence 678999999999999997 89999999999999999984211 011111110000
Q ss_pred c---ccC-CCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC--CCCCCCCeeeCCc
Q 025190 143 L---SKA-TRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT--VNVGEADYALENV 216 (256)
Q Consensus 143 ~---~~~-~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~--~~~~~~~~~~~~~ 216 (256)
. +.. ..........+..|.-...+.+.++-....++++||+.||+.|.+.+|++.++-..+ ..+..+|+++.+.
T Consensus 684 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~ 763 (1034)
T 3ixz_A 684 DPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDD 763 (1034)
T ss_pred CHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccC
Confidence 0 000 000000011222333333444433333456999999999999999999998875232 3456788888664
Q ss_pred C
Q 025190 217 N 217 (256)
Q Consensus 217 ~ 217 (256)
+
T Consensus 764 ~ 764 (1034)
T 3ixz_A 764 N 764 (1034)
T ss_pred C
Confidence 3
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.57 E-value=7.3e-05 Score=70.01 Aligned_cols=120 Identities=9% Similarity=0.063 Sum_probs=74.2
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc-c---eeEecccCCc-ccccCCCCCCCCCC--CCC-
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-D---QIICFETMNP-NLSKATRPDEFPVL--LKP- 158 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f-~---~i~~~~~~~~-~~~~~~~~~~~~~~--~Kp- 158 (256)
+|.|++.+.++.|++.|+ ++|+.....+..+.+.+|+.... + .++++++... .-+.. .......+ ..|
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~-~~~~~~V~arv~P~ 613 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYD-FVEAADGFAEVFPQ 613 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGT-TTTTTSCEESCCST
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHH-HHhhCeEEEEeCHH
Confidence 688999999999999997 89999999999999999986321 1 0111110000 00000 00000011 222
Q ss_pred -CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeCC
Q 025190 159 -SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALEN 215 (256)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~~ 215 (256)
|...++.+.+ . .+.+.++||+.||..+.+.++++.++- .+. .+..+|+++.+
T Consensus 614 ~K~~iV~~Lq~-~---g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~ 668 (920)
T 1mhs_A 614 HKYNVVEILQQ-R---GYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLA 668 (920)
T ss_dssp HHHHHHHHHHT-T---TCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESS
T ss_pred HHHHHHHHHHh-C---CCeEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcC
Confidence 3333333332 2 367999999999999999999988875 332 22458888743
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0001 Score=56.64 Aligned_cols=92 Identities=12% Similarity=0.053 Sum_probs=71.8
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcc-cccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIA-DCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
+...||+.+||+.+++. + |.|.+....+..+++.++.. .+|+.++..+.+.. ++ ..+.
T Consensus 58 v~~RPgl~eFL~~l~~~-yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~---------------~~--g~y~ 119 (204)
T 3qle_A 58 TAKRPGADYFLGYLSQY-YEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVY---------------KD--GVHI 119 (204)
T ss_dssp EEECTTHHHHHHHHTTT-EEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEE---------------ET--TEEE
T ss_pred EEeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeE---------------EC--Ceee
Confidence 46789999999999954 4 99999999999999999987 48888777666542 11 1244
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
+-++.+|.++++||+|+|+..-+......|+.+.
T Consensus 120 KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~ 153 (204)
T 3qle_A 120 KDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPME 153 (204)
T ss_dssp CCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECC
T ss_pred ecHHHhCCChHHEEEEECCHHHHhhCccCceEee
Confidence 5567789999999999999998876666666554
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00029 Score=65.88 Aligned_cols=124 Identities=9% Similarity=0.053 Sum_probs=73.9
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccc-cc-ceeEecccCCcccccCCCC----CCCCCCCCCCH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIAD-CF-DQIICFETMNPNLSKATRP----DEFPVLLKPSM 160 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~-~f-~~i~~~~~~~~~~~~~~~~----~~~~~~~Kp~~ 160 (256)
++.|++.+.++.|++.|+ ++|+.....+..+.+.+|+.. .+ +.++.+.+.... ...... .....+..-.|
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~-~~~~~l~~~~~~~~v~arv~P 566 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDAN-LASIPVEELIEKADGFAGVFP 566 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTT-SCCSCHHHHHHTSCCEECCCH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccc-cchhHHHHHHhhCcEEEEECH
Confidence 678999999999999997 899999999999999999853 11 112221111000 000000 00001122223
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeCC
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALEN 215 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~~ 215 (256)
+--..+.+.++-..+.+.++||+.||..+.+.++++.++- .+. .+..+|+++.+
T Consensus 567 ~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~ 622 (885)
T 3b8c_A 567 EHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTE 622 (885)
T ss_dssp HHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSS
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeecc
Confidence 3333333332222367999999999999999999988764 232 22446776643
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0013 Score=52.05 Aligned_cols=31 Identities=13% Similarity=0.173 Sum_probs=23.1
Q ss_pred HHHHhhhcCcE---EEecCChHHHHHHHHhcCcc
Q 025190 97 NLLCSITQRKI---IFTNSDRNHAITCLKRLEIA 127 (256)
Q Consensus 97 ~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~ 127 (256)
+.|++|+++|+ ++|++....+...++.+++.
T Consensus 24 ~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 24 PIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp HHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 45666666776 78888888888888888765
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.81 E-value=9.9e-05 Score=60.77 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=62.4
Q ss_pred CCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCccccc--ceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
...||+.+||+.+.+.. + |-|.+....+..+++.++....+ ...+..+.+... +...........|. +..
T Consensus 164 ~~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~--~~~~~~~g~~~vKd----Ls~ 237 (320)
T 3shq_A 164 LMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMI--SVHVPERGVVDVKP----LGV 237 (320)
T ss_dssp HBCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCE--EEEETTTEEEEECC----HHH
T ss_pred EeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccc--cccccCCCCEEEEE----hHH
Confidence 45789999999999653 2 99999999999999999876543 222222211000 00000000001233 222
Q ss_pred HHHHc-CCCCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 166 ALHVA-NVDPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 166 ~~~~~-~~~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
+...+ |.+.+++|+|+|++.-.......|+...
T Consensus 238 Lw~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~I~ 271 (320)
T 3shq_A 238 IWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIR 271 (320)
T ss_dssp HHHHCTTCCGGGEEEEESCGGGGTTSGGGEEECC
T ss_pred hhcccCCCChhHEEEEeCChHHhccCcCceEEeC
Confidence 22222 7889999999999988877767766544
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0012 Score=46.48 Aligned_cols=17 Identities=41% Similarity=0.573 Sum_probs=14.7
Q ss_pred CeEEEEecCCCccCCCc
Q 025190 5 FNCLVFDLDDTLYPSET 21 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~ 21 (256)
+|+|+||+||||+++..
T Consensus 1 ik~i~~DlDGTL~~~~~ 17 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANT 17 (126)
T ss_dssp CCEEEECSTTTTBCCCC
T ss_pred CCEEEEecCCCCCCCCC
Confidence 47999999999998764
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.012 Score=45.90 Aligned_cols=77 Identities=8% Similarity=0.108 Sum_probs=62.3
Q ss_pred EEEecCChHHHHHHHHhcCccccc--ceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc
Q 025190 107 IIFTNSDRNHAITCLKRLEIADCF--DQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184 (256)
Q Consensus 107 ~ivs~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~ 184 (256)
++||++.-...-..+=.+|+..+| +.|+++-.++ |...|+++.+++| +...-++|||+.
T Consensus 180 VLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~kiG------------------KesCFerI~~RFG-~k~~yvvIGDG~ 240 (274)
T 3geb_A 180 VLVTTTQLIPALAKVLLYGLGSVFPIENIYSATKTG------------------KESCFERIMQRFG-RKAVYVVIGDGV 240 (274)
T ss_dssp EEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTTTC------------------HHHHHHHHHHHHC-TTSEEEEEESSH
T ss_pred EEEecCchHHHHHHHHHhhcccceecccccchhhcC------------------HHHHHHHHHHHhC-CCceEEEECCCH
Confidence 389999777666666678888887 4688876543 3389999999997 456789999999
Q ss_pred cccHHHHHcCCeEEEEcC
Q 025190 185 KNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 185 ~Di~~a~~~G~~~v~v~~ 202 (256)
.--++|+..+++++-+..
T Consensus 241 eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 241 EEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp HHHHHHHHTTCCEEECCS
T ss_pred HHHHHHHHcCCCeEEeec
Confidence 999999999999987753
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0011 Score=52.31 Aligned_cols=45 Identities=9% Similarity=-0.127 Sum_probs=35.1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcC----CccccHHHHHcCCeEEEEcC
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDD----NIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~~~G~~~v~v~~ 202 (256)
.+-.|..+++++ +|++++++++||| +.||++|.+.+|...+.+++
T Consensus 185 ~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~N 233 (246)
T 2amy_A 185 DGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 233 (246)
T ss_dssp TTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred CCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeC
Confidence 355666788888 8999999999999 99999999999875555543
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0027 Score=50.65 Aligned_cols=46 Identities=4% Similarity=-0.273 Sum_probs=38.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CccccHHHHHcCCeEEEEc
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDD----NIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~~~G~~~v~v~ 201 (256)
...+-.|..+++++ +|++++++++||| +.||++|.+.+|...+.+.
T Consensus 192 ~~~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~ 241 (262)
T 2fue_A 192 FPEGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV 241 (262)
T ss_dssp EETTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS
T ss_pred ecCCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec
Confidence 33455677889888 8999999999999 9999999999997666553
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0027 Score=50.57 Aligned_cols=31 Identities=26% Similarity=0.330 Sum_probs=22.4
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHH
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEG 33 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~ 33 (256)
.++|+|+||+||||++....+.....+++++
T Consensus 11 ~~~kli~~DlDGTLl~~~~~is~~~~~al~~ 41 (262)
T 2fue_A 11 KERVLCLFDVDGTLTPARQKIDPEVAAFLQK 41 (262)
T ss_dssp --CEEEEEESBTTTBSTTSCCCHHHHHHHHH
T ss_pred cCeEEEEEeCccCCCCCCCcCCHHHHHHHHH
Confidence 3579999999999999876665555555554
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.77 E-value=0.0023 Score=50.44 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=24.0
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHH
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEG 33 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~ 33 (256)
|++|+|+||+||||++.+..+.....+++++
T Consensus 4 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~ 34 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAPRQKITKEMDDFLQK 34 (246)
T ss_dssp CCSEEEEEESBTTTBCTTSCCCHHHHHHHHH
T ss_pred CCceEEEEECCCCcCCCCcccCHHHHHHHHH
Confidence 5789999999999999877665555665554
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=94.84 E-value=0.015 Score=45.56 Aligned_cols=15 Identities=33% Similarity=0.592 Sum_probs=12.8
Q ss_pred CeEEEEecCCCccCC
Q 025190 5 FNCLVFDLDDTLYPS 19 (256)
Q Consensus 5 ~k~viFD~DGTL~d~ 19 (256)
+|+|+||+||||++.
T Consensus 1 ikli~~DlDGTLl~~ 15 (239)
T 1u02_A 1 MSLIFLDYDGTLVPI 15 (239)
T ss_dssp -CEEEEECBTTTBCC
T ss_pred CeEEEEecCCCCcCC
Confidence 478999999999984
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=94.75 E-value=0.013 Score=46.07 Aligned_cols=16 Identities=31% Similarity=0.349 Sum_probs=13.7
Q ss_pred eEEEEecCCCccCCCc
Q 025190 6 NCLVFDLDDTLYPSET 21 (256)
Q Consensus 6 k~viFD~DGTL~d~~~ 21 (256)
.+|+||+||||++...
T Consensus 4 ~li~~DlDGTLl~~~~ 19 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQQ 19 (244)
T ss_dssp EEEEECTBTTTBSCHH
T ss_pred eEEEEeCCCCCcCCHH
Confidence 3899999999999763
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=93.20 E-value=0.058 Score=46.11 Aligned_cols=78 Identities=21% Similarity=0.278 Sum_probs=58.7
Q ss_pred CCCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCccc-ccce-eEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIAD-CFDQ-IICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~-~f~~-i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
.+...||+.+||+.+++.. + |.|.+...++..+++.++... +|.. +++.+.++. ...|.
T Consensus 81 ~V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~------------~~~Kd----- 143 (442)
T 3ef1_A 81 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS------------LAQKS----- 143 (442)
T ss_dssp EEEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSC------------SSCCC-----
T ss_pred EEEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCC------------ceeee-----
Confidence 3577899999999999653 2 999999999999999998876 6764 665555432 01232
Q ss_pred HHHHHH-cCCCCCcEEEEcCCcc
Q 025190 164 KLALHV-ANVDPRHALFLDDNIK 185 (256)
Q Consensus 164 ~~~~~~-~~~~~~~~i~vGDs~~ 185 (256)
+.. +|.+.+.+|+|+|++.
T Consensus 144 ---L~~ll~rdl~~vvIIDd~p~ 163 (442)
T 3ef1_A 144 ---LRRLFPCDTSMVVVIDDRGD 163 (442)
T ss_dssp ---GGGTCSSCCTTEEEEESCSG
T ss_pred ---hHHhcCCCcceEEEEECCHH
Confidence 332 4888999999999984
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=91.04 E-value=0.42 Score=40.22 Aligned_cols=31 Identities=16% Similarity=0.349 Sum_probs=21.7
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHH
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLI 36 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~ 36 (256)
+|.|+||+|||+++...-+ +...-++..++.
T Consensus 1 ~~~~~fdvdgv~~~~~~~~-d~~~ltv~~~l~ 31 (384)
T 1qyi_A 1 MKKILFDVDGVFLSEERCF-DVSALTVYELLM 31 (384)
T ss_dssp CCEEEECSBTTTBCSHHHH-HHHHHHHHHHHH
T ss_pred CceEEEecCceeechhhhc-cHHHHHHHHHHc
Confidence 4789999999999886544 344556665443
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=88.65 E-value=0.88 Score=35.68 Aligned_cols=80 Identities=24% Similarity=0.293 Sum_probs=50.7
Q ss_pred hhHHHHHHhhhcCcE---EEecCChHH---HHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 93 PQLRNLLCSITQRKI---IFTNSDRNH---AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 93 pg~~~~l~~l~~~~~---ivs~~~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
|++.+.++.|+++|+ ++||+.... ....++.+|+....+.++++.. .....
T Consensus 20 ~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~-----------------------~~~~~ 76 (263)
T 1zjj_A 20 PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGL-----------------------ATRLY 76 (263)
T ss_dssp TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHH-----------------------HHHHH
T ss_pred ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHH-----------------------HHHHH
Confidence 678899999988876 899876533 3444556787655567776432 23333
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeE
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRT 197 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~ 197 (256)
+++. .+..++.++|.. .....++..|+..
T Consensus 77 l~~~-~~~~~v~viG~~-~l~~~l~~~G~~~ 105 (263)
T 1zjj_A 77 MSKH-LDPGKIFVIGGE-GLVKEMQALGWGI 105 (263)
T ss_dssp HHHH-SCCCCEEEESCH-HHHHHHHHHTSCB
T ss_pred HHHh-CCCCEEEEEcCH-HHHHHHHHcCCee
Confidence 4433 233578888874 4566667777654
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=88.36 E-value=0.67 Score=36.77 Aligned_cols=47 Identities=19% Similarity=0.181 Sum_probs=37.5
Q ss_pred CChhHHHHHHhhhcCcE---EEec---CChHHHHHHHHhcCcc-cccceeEecc
Q 025190 91 PDPQLRNLLCSITQRKI---IFTN---SDRNHAITCLKRLEIA-DCFDQIICFE 137 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~---~~~~~~~~~l~~~gl~-~~f~~i~~~~ 137 (256)
++|++.+.|+.|+++|+ ++|| .........++.+|+. ..++.++++.
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~~~ 84 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISSG 84 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEEHH
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEcHH
Confidence 45788899999999986 8887 4667778888999998 7777777753
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.18 E-value=0.44 Score=36.00 Aligned_cols=17 Identities=47% Similarity=0.714 Sum_probs=14.6
Q ss_pred CCeEEEEecCCCccCCC
Q 025190 4 PFNCLVFDLDDTLYPSE 20 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~ 20 (256)
..+++++|+||||+++.
T Consensus 27 ~k~~LVLDLD~TLvhs~ 43 (195)
T 2hhl_A 27 GKKCVVIDLDETLVHSS 43 (195)
T ss_dssp TCCEEEECCBTTTEEEE
T ss_pred CCeEEEEccccceEccc
Confidence 45789999999999874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 256 | ||||
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 1e-11 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 4e-11 | |
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 6e-10 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 2e-09 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 2e-09 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 3e-09 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 4e-09 | |
| d2hcfa1 | 228 | c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C | 4e-09 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 5e-09 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 2e-08 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 2e-08 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 4e-08 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 4e-08 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 5e-08 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 1e-07 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 2e-07 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 2e-07 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 6e-07 | |
| d2ah5a1 | 210 | c.108.1.6 (A:1-210) predicted phosphatase SP0104 { | 3e-06 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-04 | |
| d2c4na1 | 250 | c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId | 4e-04 | |
| d1vjra_ | 261 | c.108.1.14 (A:) Hypothetical protein TM1742 {Therm | 6e-04 | |
| d2fpwa1 | 161 | c.108.1.19 (A:3-163) Histidine biosynthesis bifunc | 0.002 | |
| d1yv9a1 | 253 | c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En | 0.003 |
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 60.6 bits (145), Expect = 1e-11
Identities = 35/224 (15%), Positives = 70/224 (31%), Gaps = 10/224 (4%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL 64
F ++FDLD + + A K L E+ G + + +L +
Sbjct: 2 FKAVLFDLDGVITDTAEYHFRAWKA-----LAEEIGINGVDRQFNEQLKGVSREDSLQKI 56
Query: 65 RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRL 124
L + + + R + +K + I + L
Sbjct: 57 LDLADKKVSAEEFKELAKRKNDNYVKMIQD----VSPADVYPGILQLLKDLRSNKIKIAL 112
Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184
A + A KP+ D A H V P ++ L+D+
Sbjct: 113 ASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQ 172
Query: 185 KNVTAGKALGLRTVLVGKTVNVGEADYALENVNNL-PQVVPEIW 227
+ A K G + VG+ ++G+ + + ++ + + E+W
Sbjct: 173 AGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVW 216
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 58.2 bits (139), Expect = 4e-11
Identities = 29/196 (14%), Positives = 63/196 (32%), Gaps = 19/196 (9%)
Query: 9 VFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRALG 68
+FDL + + + ++ + + + S A AL
Sbjct: 4 IFDLGNVIVDIDFNRVLGAWSDLTRIPLASL-KKSFHMGEAFHQHERGEISDEAFAEALC 62
Query: 69 YDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL- 124
+++ + + P++ ++ + ++ + +N++R H +
Sbjct: 63 HEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP 122
Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184
EI D D I + + KP + L P +F DDN
Sbjct: 123 EIRDAADHIYLSQDLGMR--------------KPEARIYQHVLQAEGFSPSDTVFFDDNA 168
Query: 185 KNVTAGKALGLRTVLV 200
N+ LG+ ++LV
Sbjct: 169 DNIEGANQLGITSILV 184
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 55.6 bits (132), Expect = 6e-10
Identities = 30/218 (13%), Positives = 59/218 (27%), Gaps = 16/218 (7%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
+FD+D L SE A ++ G ++ + L L + A
Sbjct: 6 AIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRRNELPDTLGLRIDMVVDLWYA- 59
Query: 68 GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIA 127
V + + + L + +
Sbjct: 60 RQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPL---- 115
Query: 128 DCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNV 187
+ + + A E KP VDP + L+D++ +
Sbjct: 116 -HMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGM 174
Query: 188 TAGKALGLRTVLVGKTVNVGE-----ADYALENVNNLP 220
A KA +R+++V + A+ L ++ L
Sbjct: 175 IASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 212
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 54.5 bits (129), Expect = 2e-09
Identities = 31/236 (13%), Positives = 78/236 (33%), Gaps = 29/236 (12%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
+ F + FDLD TL S +A ++ ++ + + + + +
Sbjct: 2 TQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDW 61
Query: 63 GLRALGYDIGADDY------HGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNS---D 113
+ ++ D++ GF +G ++ + P ++ L ++ + I
Sbjct: 62 ACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKP 121
Query: 114 RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVD 173
H L I F +++ +++ KP +
Sbjct: 122 TKHVQPILTAFGIDHLFSEMLGGQSLPEI--------------KPHPAPFYYLCGKFGLY 167
Query: 174 PRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGE------ADYALENVNNLPQVV 223
P+ LF+ D+ ++ A + G V + N D+ ++ ++ ++
Sbjct: 168 PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 223
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.0 bits (128), Expect = 2e-09
Identities = 38/234 (16%), Positives = 58/234 (24%), Gaps = 36/234 (15%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIE---------------KCGFSETKASSLRVE 52
VFDLD L S +
Sbjct: 5 AVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIP 64
Query: 53 LFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNS 112
L + + + F + +P Q +L I TN+
Sbjct: 65 LMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNT 124
Query: 113 DRNHAITCLKR----LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALH 168
+ E+ FD +I + KP K L
Sbjct: 125 WLDDRAERDGLAQLMCELKMHFDFLIESCQVGMV--------------KPEPQIYKFLLD 170
Query: 169 VANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQV 222
P +FLDD N+ + LG+ T+LV + A LE V + +
Sbjct: 171 TLKASPSEVVFLDDIGANLKPARDLGMVTILV---QDTDTALKELEKVTGIQLL 221
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.3 bits (126), Expect = 3e-09
Identities = 28/225 (12%), Positives = 56/225 (24%), Gaps = 34/225 (15%)
Query: 5 FNCLVFDLDDTLYPSETG---IAAAVKRNIEGFLIEKCGFSETKA---------SSLRVE 52
++ + D++ T+ P + + + + S
Sbjct: 3 YSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQA 62
Query: 53 LFKAYGSTLAGLRALGYDIGADDYHGFVHGRLP-------YDLIKPDPQLRNLLCSITQR 105
+ L G HG+ G++ D IK ++ +
Sbjct: 63 HILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKA 122
Query: 106 KIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165
+ + ++ L++ D T K +
Sbjct: 123 QKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGK---------------KTETQSYAN 167
Query: 166 ALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEAD 210
L LFL DN + A +G+ T L + N D
Sbjct: 168 ILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPD 212
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 53.2 bits (126), Expect = 4e-09
Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)
Query: 8 LVFDLDDTLYPSETGIA---AAVKRNI-EGFLIEKCGFSETKASSLRVELFKAYGSTLAG 63
FDLD L A + + FL+ + + ++ K S
Sbjct: 3 AAFDLDGVLALPSIAGAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQWVP 62
Query: 64 L---------RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQR-------KI 107
L +A G ++ + + + + + ++ ++
Sbjct: 63 LMDESYRKSSKACGANLPENFSISQIFSQA-MAARSINRPMLQAAIALKKKGFTTCIVTN 121
Query: 108 IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLAL 167
+ + E++ FD +I + KP L
Sbjct: 122 NWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMI--------------KPEPQIYNFLL 167
Query: 168 HVANVDPRHALFLDDNIKNVTAGKALGLRTVLV 200
P +FLDD N+ + +G+ T+LV
Sbjct: 168 DTLKAKPNEVVFLDDFGSNLKPARDMGMVTILV 200
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Score = 53.3 bits (126), Expect = 4e-09
Identities = 30/230 (13%), Positives = 58/230 (25%), Gaps = 19/230 (8%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFL-----IEKCGFSETKASSLRVELFKAYGSTLA 62
++FD+D TL E+ + + FS ++ E+ G A
Sbjct: 5 VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERA 64
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLK 122
+ +D + Y R + I +R + + +T
Sbjct: 65 EIADK-FDKAKETYIALFRERARREDITLLEGVRE-----LLDALSSRSDVLLGLLTGNF 118
Query: 123 RLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDD 182
D L + AN P + + D
Sbjct: 119 EASGRHKLKLPGIDHYFPFGAFADDALDRNE--LPHIALERARRMTGANYSPSQIVIIGD 176
Query: 183 NIKNVTAGKALGLRTVLVGKTVNVGE------ADYALENVNNLPQVVPEI 226
++ + L R++ V E +N +V+ I
Sbjct: 177 TEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASI 226
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 52.5 bits (124), Expect = 5e-09
Identities = 21/217 (9%), Positives = 68/217 (31%), Gaps = 18/217 (8%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
++DLD TL S I + ++ + K ++ + +
Sbjct: 4 FIWDLDGTLLDSYEAILSGIEE-----TFAQFSIPYDKE-----KVREFIFKYSVQDLLV 53
Query: 68 GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIA 127
+ ++ L + + Q+ + + + + T
Sbjct: 54 RVAEDRNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTH------K 107
Query: 128 DCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNV 187
I + + + + KPS +A L ++ + ++ D +V
Sbjct: 108 GNNAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDV 167
Query: 188 TAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVP 224
+ G++++ ++ E ++ ++ + ++ ++
Sbjct: 168 EFAQNSGIQSINFLESTY--EGNHRIQALADISRIFE 202
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 51.4 bits (121), Expect = 2e-08
Identities = 26/218 (11%), Positives = 58/218 (26%), Gaps = 10/218 (4%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
+ FDL TL+ + + + + + + +
Sbjct: 5 IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATED 64
Query: 68 GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIA 127
+ R L +L + + + ++ I
Sbjct: 65 ALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSID 124
Query: 128 DCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNV 187
+ + L + + KP +LA +D LF+ N +
Sbjct: 125 AVVSHAGLRDGFDHLL-----SVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDA 179
Query: 188 TAGKALGLRTVLVGKTVNVGE-----ADYALENVNNLP 220
T + G T + +T NV E D+ + ++ +
Sbjct: 180 TGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVV 217
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 51.4 bits (121), Expect = 2e-08
Identities = 30/233 (12%), Positives = 65/233 (27%), Gaps = 23/233 (9%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL 64
F+ ++FD D L SE A R L+ + G+ + +
Sbjct: 2 FDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEEMGE-RFAGMTWKNILLQ 55
Query: 65 RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRL 124
I +L ++ D ++ + + R N + L +
Sbjct: 56 VESEASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMM 115
Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184
+ A R P + V P + ++D++
Sbjct: 116 LTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQF-------GVSPDRVVVVEDSV 168
Query: 185 KNVTAGKALGLRTVLVGKTVNVGE----------ADYALENVNNLPQVVPEIW 227
+ +A G+R + + A+ + + +LP V+ +
Sbjct: 169 HGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMA 221
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 50.6 bits (119), Expect = 4e-08
Identities = 33/193 (17%), Positives = 53/193 (27%), Gaps = 7/193 (3%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
+VFD TL+ + +A A +R G + L +A A ++
Sbjct: 5 VVFDAYGTLFDVQ-SVADATERAYPGRGEY--ITQVWRQKQLEYSWLRALMGRYADFWSV 61
Query: 68 GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIA 127
+ A L L + + + AI
Sbjct: 62 TREALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGA---- 117
Query: 128 DCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNV 187
Q + + A + + KP D+ L V V P LF+ N +V
Sbjct: 118 PDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDV 177
Query: 188 TAGKALGLRTVLV 200
K G V
Sbjct: 178 GGAKNFGFSVARV 190
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 49.4 bits (117), Expect = 4e-08
Identities = 31/211 (14%), Positives = 60/211 (28%), Gaps = 63/211 (29%)
Query: 7 CLVFDLDDTLYPSE--TGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL 64
VFDLD TL+P T + ++ +G + ++ G ++L+ L L
Sbjct: 7 LAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQ--------NIQLYPEVPEVLGRL 58
Query: 65 RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRL 124
++LG + S+ A L+
Sbjct: 59 QSLGVPVA----------------------------------AASRTSEIQGANQLLELF 84
Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184
++ F Q + + H V +F DD
Sbjct: 85 DLGKYFIQREIYPGSKV-------------------THFERLHHKTGVPFSQMVFFDDEN 125
Query: 185 KNVTAGKALGLRTVLVGKTVNVGEADYALEN 215
+N+ LG+ + + +++ LE
Sbjct: 126 RNIIDVGRLGVTCIHIRDGMSLQTLTQGLET 156
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 50.2 bits (118), Expect = 5e-08
Identities = 33/252 (13%), Positives = 71/252 (28%), Gaps = 38/252 (15%)
Query: 1 MD-SPFNCLVFDLDDTLYPSETGIAAAVKRNIE------GFLIEKCGFSETKASSLRVEL 53
M S + FDLD+TL + + I+ + E + L E
Sbjct: 1 MGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKEC 60
Query: 54 FKAYGSTLAGLRALGYDIGADDYHG------------FVHGRLPYDLIKPDPQLRNLLCS 101
F Y + + +R ++ + G F+ + ++ +L
Sbjct: 61 FHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTE 120
Query: 102 ITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMD 161
+ + + ++ + K A KP+
Sbjct: 121 LRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEE------------KPAPS 168
Query: 162 AMKLALHVANVDPRHALFLDDNIKN-VTAGKALGLRTVLV------GKTVNVGEADYALE 214
+ V P + + D ++ + G GL+ + + Y +
Sbjct: 169 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS 228
Query: 215 NVNNLPQVVPEI 226
+V LP ++ I
Sbjct: 229 SVLELPALLQSI 240
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 49.1 bits (115), Expect = 1e-07
Identities = 26/230 (11%), Positives = 62/230 (26%), Gaps = 14/230 (6%)
Query: 7 CLVFDLDDTLYPSETGIAAAVK---RNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG 63
+ FD TL E +K + + + + R G
Sbjct: 4 AVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRP 63
Query: 64 LRALGYDI---GADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITC 120
+R + ++ A+ Y ++ + L + + IT
Sbjct: 64 IRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGKYHVGMITD 123
Query: 121 LKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFL 180
+ + + T +E
Sbjct: 124 ----SDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVG 179
Query: 181 DDNIKNVTAGKALGLRTVLVGKTVNVGE----ADYALENVNNLPQVVPEI 226
D+ +K+ K LG+ ++L+ + E D+ + ++ + ++V E+
Sbjct: 180 DNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 48.2 bits (113), Expect = 2e-07
Identities = 28/204 (13%), Positives = 63/204 (30%), Gaps = 23/204 (11%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGL 64
++ ++DL TL + AA + + I + S +A + +
Sbjct: 3 YHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETFAP---- 58
Query: 65 RALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRL 124
+ + Y L + ++ S + + + + L++
Sbjct: 59 ---NLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKT 115
Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184
IA F +++ + ++M + L + D
Sbjct: 116 SIAAYFTEVVTSSSGFKRKPNP--------------ESMLYLREKYQISS--GLVIGDRP 159
Query: 185 KNVTAGKALGLRTVLVGKTVNVGE 208
++ AG+A GL T L VN+ +
Sbjct: 160 IDIEAGQAAGLDTHLFTSIVNLRQ 183
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (113), Expect = 2e-07
Identities = 24/248 (9%), Positives = 57/248 (22%), Gaps = 51/248 (20%)
Query: 1 MDSPFNCLVFDLDDTLYPSETGIAAA---VKRNIEGFLIEKCGFSETKASSLRVELFKAY 57
+ + ++ D++ T P ++ N++ +L E + +
Sbjct: 3 VPAEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEE 62
Query: 58 GSTLAGLRALGYDIGAD-----------------------------------DYHGFVHG 82
+ L G + G F G
Sbjct: 63 DAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAG 122
Query: 83 RLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPN 142
R+ + + I+++ D + +
Sbjct: 123 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIG 182
Query: 143 LSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK 202
K ++ + + LFL D + +A + + +V +
Sbjct: 183 H-------------KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVR 229
Query: 203 TVNVGEAD 210
N G D
Sbjct: 230 PGNAGLTD 237
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 46.8 bits (109), Expect = 6e-07
Identities = 26/223 (11%), Positives = 61/223 (27%), Gaps = 22/223 (9%)
Query: 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG 63
+ L+FD+D TL S+ ++ ++ G + A + K +
Sbjct: 2 TYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPFSPA-----QAQKTFPMA--- 48
Query: 64 LRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKR 123
+ + + D + I +
Sbjct: 49 -----AEQAMTELGIAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGIV 103
Query: 124 LEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDN 183
+ T + KP + AL NV P++ALF+ D+
Sbjct: 104 TSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDS 163
Query: 184 IKNVTAGKALGLRTVLV----GKTVNVGEADYALENVNNLPQV 222
+ + +A + L + + + + ++ ++
Sbjct: 164 VSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL 206
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 44.4 bits (103), Expect = 3e-06
Identities = 42/227 (18%), Positives = 71/227 (31%), Gaps = 29/227 (12%)
Query: 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA 62
+ + FDLD TL S GI A ++ G A ++R + S+ A
Sbjct: 2 TSITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKTIRGFMGPPLESSFA 56
Query: 63 GLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLL--CSITQRKIIFTNSDRNHAITC 120
+ A + + + PQ+ +LL S + I T D + A
Sbjct: 57 TCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDM 116
Query: 121 LKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFL 180
K LEI FD I P+ D + AL + P A+ +
Sbjct: 117 AKNLEIHHFFDGIYGSSPEAPH----------------KADVIHQALQTHQLAPEQAIII 160
Query: 181 DDNIKNVTAGKALGLRTVLVGKTVNVGE------ADYALENVNNLPQ 221
D ++ + G++ + + DY +
Sbjct: 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 39.6 bits (91), Expect = 2e-04
Identities = 25/225 (11%), Positives = 62/225 (27%), Gaps = 21/225 (9%)
Query: 8 LVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAGLRAL 67
++ D D T+ ++ I + K L L + + + L
Sbjct: 7 IICDFDGTITMNDNIINIMKTFAPP-------EWMALKDGVLSKTL--SIKEGVGRMFGL 57
Query: 68 GYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL 124
++ FV + K R + I + +I + + L+ +
Sbjct: 58 LPSSLKEEITSFVL-----EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI 112
Query: 125 EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI 184
D N + +H + ++ + + D++
Sbjct: 113 VEKDRIYC-NHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSV 171
Query: 185 KNVTAGKALGL---RTVLVGKTVNVGEADYALENVNNLPQVVPEI 226
+V A K L R L+ + ++ + + + +
Sbjct: 172 TDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENV 216
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Score = 38.5 bits (88), Expect = 4e-04
Identities = 33/247 (13%), Positives = 70/247 (28%), Gaps = 32/247 (12%)
Query: 7 CLVFDLDDTLYPSETGIAAAV-------KRNIEGFLI-------EKCGFSETKASSLRVE 52
++ D+D L + A + + L+ + + + + V
Sbjct: 5 NVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64
Query: 53 LFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKIIFTNS 112
Y S +A L G Y G L ++L K + ++ + +
Sbjct: 65 DSVFYTSAMATADFLRRQEGKKAYV-VGEGALIHELYKAGFTITDVNPDFVIVGETRSYN 123
Query: 113 DRNHAITCLKRLEIA--------DCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164
A + + + KPS ++
Sbjct: 124 WDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIR 183
Query: 165 LALHVANVDPRHALFLDDNIKN-VTAGKALGLRTVLVGKTVNVGE--------ADYALEN 215
AL+ + + DN++ + AG GL T+LV V+ + + +
Sbjct: 184 AALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243
Query: 216 VNNLPQV 222
V + +
Sbjct: 244 VAEIDVI 250
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Score = 38.1 bits (87), Expect = 6e-04
Identities = 28/254 (11%), Positives = 62/254 (24%), Gaps = 35/254 (13%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAV-------KRNIEGFLI------------EKCGFSETK 45
+ D+D T Y ++ + ++ ++N K
Sbjct: 7 IELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 66
Query: 46 ASSLRVELFKAYGSTLAGLRALGYDIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSIT-- 103
V + R I Y + + ++
Sbjct: 67 VPDDAVVTSGEITAEHMLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVLGFDKT 126
Query: 104 -----QRKIIFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP 158
+K I + + ++ + +T + KP
Sbjct: 127 LTYERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKP 186
Query: 159 SMDAMKLALHVANVDPRHALFLDDNIKN-VTAGKALGLRTVLVGKTVNVGE--------A 209
+ + + V + D + V GK G+ ++LV E
Sbjct: 187 NPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKP 246
Query: 210 DYALENVNNLPQVV 223
D+ +N+ L + V
Sbjct: 247 DFVFKNLGELAKAV 260
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Score = 35.6 bits (81), Expect = 0.002
Identities = 6/46 (13%), Positives = 20/46 (43%)
Query: 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK 202
KP + ++ L +D ++ + D ++ + +G+ + +
Sbjct: 104 KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDR 149
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Score = 35.8 bits (81), Expect = 0.003
Identities = 27/223 (12%), Positives = 69/223 (30%), Gaps = 27/223 (12%)
Query: 5 FNCLVFDLDDTLYPSETGIAAAV-------KRNIEGFLI-----------EKCGFSETKA 46
+ + DLD T+Y + I A ++++ + + +E
Sbjct: 2 YQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDI 61
Query: 47 SSLRVELFKAYGSTLAGLRALGYD------IGADDYHGFVHGRLPYDLIKPDPQLRNLLC 100
++ A +T+ ++ A + +D PD + L
Sbjct: 62 HVPASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVVGLDT 121
Query: 101 SITQRKIIFTNS--DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKP 158
++ K++ + + ++ + + + KP
Sbjct: 122 ELSYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKP 181
Query: 159 SMDAMKLALHVANVDPRHALFLDDNIKN-VTAGKALGLRTVLV 200
M+ A+ V+ + + DN + + +G G+ ++LV
Sbjct: 182 KAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLV 224
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 256 | |||
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.97 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.97 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.97 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.97 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.96 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.96 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.96 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.96 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.96 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.96 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.96 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.96 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.95 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.94 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.92 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.89 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.89 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.89 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.88 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.86 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.83 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.82 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.82 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.81 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.81 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.81 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.79 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.78 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.75 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.72 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.65 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.61 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.58 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.44 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.36 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.33 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.25 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.23 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.18 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.15 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 99.14 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.11 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.1 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.03 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.01 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.97 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.84 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.71 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.7 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.65 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.57 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.54 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.47 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.38 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.99 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.87 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 97.44 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.65 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 94.06 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 92.62 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 87.47 |
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.97 E-value=1.3e-31 Score=208.58 Aligned_cols=196 Identities=18% Similarity=0.269 Sum_probs=151.6
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhh-HHHHHHcCCC-CChhhHhhhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGST-LAGLRALGYD-IGADDYHGFV 80 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~ 80 (256)
|++|+|+||+||||+|+.+.+..++.. +++.+|.+....+. ...++.. ...+...+.. ...+.+...+
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPFSPAQA-----QKTFPMAAEQAMTELGIAASEFDHFQAQY 70 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHH-----HHHTTTCCCCHHHH-----HHHTTSCHHHHHHHTTCCGGGHHHHHHHH
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHhcchhhhhhhccccchhhHHHHHHHh
Confidence 468999999999999998888888887 56677776444322 2223222 2334443332 1222333322
Q ss_pred hcCC--CCCCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCC
Q 025190 81 HGRL--PYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 81 ~~~~--~~~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
.+.+ .....+++||+.++|+.|++++. ++||+....++..++++|+..+|+.++++++.+. +
T Consensus 71 ~~~~~~~~~~~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~--------------~ 136 (207)
T d2hdoa1 71 EDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPK--------------R 136 (207)
T ss_dssp HHHHTTCGGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSC--------------C
T ss_pred hhhhcccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccccccccc--------------c
Confidence 2211 13467899999999999987654 9999999999999999999999999999998876 8
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----CCCCCeeeCCcCchHHh
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN----VGEADYALENVNNLPQV 222 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----~~~~~~~~~~~~el~~~ 222 (256)
||+|.++.++++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++++.++.||.++
T Consensus 137 KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~l 206 (207)
T d2hdoa1 137 KPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL 206 (207)
T ss_dssp TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGG
T ss_pred hhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHhh
Confidence 9999999999999999999999999999999999999999999975532 24688999998888764
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.97 E-value=4.8e-31 Score=207.18 Aligned_cols=202 Identities=14% Similarity=0.253 Sum_probs=151.8
Q ss_pred CCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhh----hh-HHHHHHcCCCCChhhH
Q 025190 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYG----ST-LAGLRALGYDIGADDY 76 (256)
Q Consensus 2 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~ 76 (256)
|+++|+|+||+||||+|+.+.+..++.+ .++.+|.+................ .. .............+.+
T Consensus 1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEF 75 (224)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred CCCCCEEEEeCCCCcccCHHHHHHHHHH-----HHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHH
Confidence 4689999999999999998888888877 556667654433322111000000 00 0011112222232221
Q ss_pred hh-------hhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccC
Q 025190 77 HG-------FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKA 146 (256)
Q Consensus 77 ~~-------~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~ 146 (256)
.. ...+. ......++||+.++|+.|+++|+ ++||+....++..++.+|+.++|+.++++++.+.
T Consensus 76 ~~~~~~~~~~~~~~-~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----- 149 (224)
T d2hsza1 76 KYFKRQFGFYYGEN-LCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE----- 149 (224)
T ss_dssp HHHHHHHHHHHHHH-TTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS-----
T ss_pred HHHHHHHHHHHHHh-hccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccccccccc-----
Confidence 11 11111 13566899999999999999987 8999999999999999999999999999998886
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC------CCCCCeeeCCcCchH
Q 025190 147 TRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN------VGEADYALENVNNLP 220 (256)
Q Consensus 147 ~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~------~~~~~~~~~~~~el~ 220 (256)
.||+|..+..++++++++++++++|||+.+|+.+|+++|+.+|++.++.. +.+|+++++++.||.
T Consensus 150 ---------~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~ 220 (224)
T d2hsza1 150 ---------IKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADIL 220 (224)
T ss_dssp ---------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGG
T ss_pred ---------ccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHH
Confidence 79999999999999999999999999999999999999999999986542 356999999999999
Q ss_pred HhH
Q 025190 221 QVV 223 (256)
Q Consensus 221 ~~l 223 (256)
++|
T Consensus 221 ~ii 223 (224)
T d2hsza1 221 KIT 223 (224)
T ss_dssp GGT
T ss_pred Hhh
Confidence 876
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=4.5e-31 Score=206.88 Aligned_cols=194 Identities=17% Similarity=0.201 Sum_probs=145.2
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHH-----HHHHcCC-CCChhhH
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLA-----GLRALGY-DIGADDY 76 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~ 76 (256)
+++|+|+||+||||+|+.+.+..++.+ +++++|.+........ ...+.... ....... ......+
T Consensus 1 ~~i~a~iFD~DGTL~dt~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (218)
T d1te2a_ 1 RQILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRRNELP----DTLGLRIDMVVDLWYARQPWNGPSRQEV 71 (218)
T ss_dssp CCCCEEEECCBTTTBCCHHHHHHHHHH-----HHHHTTCCGGGGGGSC----CCTTCCHHHHHHHHHHHSCCSSSCHHHH
T ss_pred CcceEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHHH----HHhCCCccchhhhhhhcccccchhHHHH
Confidence 368999999999999998877778776 5566777654332211 11111111 1111111 1111111
Q ss_pred hh----hhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 77 HG----FVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 77 ~~----~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
.. .+...+ .....++||+.++|+.|+++|+ ++||+....++..++.+|+.++|+.++++++.+.
T Consensus 72 ~~~~~~~~~~~~-~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~-------- 142 (218)
T d1te2a_ 72 VERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY-------- 142 (218)
T ss_dssp HHHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC--------
T ss_pred HHHHHHHHHHhh-hccccccchHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc--------
Confidence 11 111111 1234678999999999999987 9999999999999999999999999999998886
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----CCCCCeeeCCcCchH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----VGEADYALENVNNLP 220 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~~~~~~~~~~el~ 220 (256)
+||+|..|..+++++|++|+++++|||+.+|+.+|+++|+.+++++.+.. ...++++++++.||.
T Consensus 143 ------~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 143 ------SKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp ------CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred ------chhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCC
Confidence 89999999999999999999999999999999999999999999976532 246899999999874
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=3.7e-31 Score=206.15 Aligned_cols=196 Identities=20% Similarity=0.245 Sum_probs=148.4
Q ss_pred CCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHH-HHHcCCCCCh----hhH
Q 025190 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG-LRALGYDIGA----DDY 76 (256)
Q Consensus 2 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~ 76 (256)
|.++|+|+||+||||+|+...+..++.+ +++++|++....+..+. ..+..... +......... +.+
T Consensus 1 M~~ik~VifD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKTIRG----FMGPPLESSFATCLSKDQISEAVQIY 71 (210)
T ss_dssp CTTCCEEEECSBTTTEECHHHHHHHHHH-----HHHHHTCCCCCHHHHHH----TSSSCHHHHHHTTSCGGGHHHHHHHH
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----hhhcchhhhccccccchhhHHHHHHH
Confidence 4679999999999999998888888887 45666766444332211 12222211 1111111111 111
Q ss_pred hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCC
Q 025190 77 HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 77 ~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
...+.... .....++||+.++++.|+.++. ++||+....++..++++|+..+|+.++++++.
T Consensus 72 ~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~--------------- 135 (210)
T d2ah5a1 72 RSYYKAKG-IYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPE--------------- 135 (210)
T ss_dssp HHHHHHTG-GGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSS---------------
T ss_pred HHHHHhhh-hhcccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhccccccccccccccc---------------
Confidence 22222221 3456789999999999998874 99999999999999999999999999988775
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC------CCCCCCeeeCCcCchHHhH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV------NVGEADYALENVNNLPQVV 223 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~------~~~~~~~~~~~~~el~~~l 223 (256)
+||+|..+.++++++|++|+++++|||+.+|+.+|+++|++++++.++. ...+|+++++++.||.++|
T Consensus 136 -~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~l 209 (210)
T d2ah5a1 136 -APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp -CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred -ccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence 5888999999999999999999999999999999999999999998764 2357999999999998776
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.96 E-value=2.5e-29 Score=201.77 Aligned_cols=203 Identities=15% Similarity=0.138 Sum_probs=146.4
Q ss_pred CCeEEEEecCCCccCCCcc-HHHHHHHHHHHHHHHHhCCCHHHHHHHH------HHHHHH----hhhhHHHHHHcCCCCC
Q 025190 4 PFNCLVFDLDDTLYPSETG-IAAAVKRNIEGFLIEKCGFSETKASSLR------VELFKA----YGSTLAGLRALGYDIG 72 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~~~~~~~~~~~~~~ 72 (256)
++|+|+||+||||+|+... ...++.+ +.+++|.+....+... ...... ...........+....
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFME-----IFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPT 75 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHH-----HHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCC
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHH-----HHHHcCCCCCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCC
Confidence 5799999999999998764 3556665 4455665432211100 000000 1111111111222222
Q ss_pred hhhH-------hhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc-ceeEecccCCc
Q 025190 73 ADDY-------HGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF-DQIICFETMNP 141 (256)
Q Consensus 73 ~~~~-------~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f-~~i~~~~~~~~ 141 (256)
...+ ...+...+ .....++||+.++|+.|+++|+ ++||+....++..++.+|+..+| |.++++++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~ 154 (257)
T d1swva_ 76 EADIQEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA 154 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSC
T ss_pred HHHHHHHHHHHHHHHHHHh-hccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccc
Confidence 2222 22222222 2456899999999999999987 99999999999999999999987 78889888876
Q ss_pred ccccCCCCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEcCCccccHHHHHcCCeEEEEcCCCC---------------
Q 025190 142 NLSKATRPDEFPVLLKPSMDAMKLALHVANVD-PRHALFLDDNIKNVTAGKALGLRTVLVGKTVN--------------- 205 (256)
Q Consensus 142 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~--------------- 205 (256)
+||+|..|..+++++|+. +++|++|||+.+|+.+|+++|+.+|+|.++..
T Consensus 155 --------------~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~ 220 (257)
T d1swva_ 155 --------------GRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSV 220 (257)
T ss_dssp --------------CTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHH
T ss_pred --------------cccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHH
Confidence 799999999999999995 58999999999999999999999999987642
Q ss_pred --------------CCCCCeeeCCcCchHHhHHHH
Q 025190 206 --------------VGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 206 --------------~~~~~~~~~~~~el~~~l~~~ 226 (256)
..+||++++++.||+.+|+.+
T Consensus 221 ~~~~~~~~~~~~l~~~gad~vi~~l~eL~~ii~~~ 255 (257)
T d1swva_ 221 ELREKIEVVRNRFVENGAHFTIETMQELESVMEHI 255 (257)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEECCHHHHHHHHHHH
Confidence 135999999999999999765
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.96 E-value=1.5e-29 Score=198.60 Aligned_cols=205 Identities=18% Similarity=0.241 Sum_probs=151.5
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh-hhhHHHHHHcCCCCChhhHhh---hh
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAY-GSTLAGLRALGYDIGADDYHG---FV 80 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~ 80 (256)
+|+|+||+||||+|+...+..++.+ +++++|++....+.......... ..........+.....+.+.. .+
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKLL 76 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHHHHHH
T ss_pred ceEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHHHHHhhhccccccccccccccccccccchhHHHHHH
Confidence 7999999999999998888888887 55667776543322111000000 111122233444444333322 22
Q ss_pred hcCCCCCCCCCChhHHHHHHhhhcCcEEEecCChHHHHHHHHhcCcccccceeE-ecccCCcccccCCCCCCCCCCCCCC
Q 025190 81 HGRLPYDLIKPDPQLRNLLCSITQRKIIFTNSDRNHAITCLKRLEIADCFDQII-CFETMNPNLSKATRPDEFPVLLKPS 159 (256)
Q Consensus 81 ~~~~~~~~~~~~pg~~~~l~~l~~~~~ivs~~~~~~~~~~l~~~gl~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~Kp~ 159 (256)
.... .....++||+.++|+.|+.++.++|++....++..++++++.++|+.++ ++++.+. ..+||+
T Consensus 77 ~~~~-~~~~~~~~g~~~~L~~l~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~------------~~~KP~ 143 (222)
T d2fdra1 77 DMRL-ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA------------DRVKPK 143 (222)
T ss_dssp HHHH-HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT------------TCCTTS
T ss_pred HHHh-hhccchhhhHHHHhhhccccceeeeecchhhhhhhhcccccccccceeecccccccc------------cccccC
Confidence 2211 2356889999999999999988999999999999999999999998754 4443321 137999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC----------CCCCeeeCCcCchHHhHHHHH
Q 025190 160 MDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV----------GEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~----------~~~~~~~~~~~el~~~l~~~~ 227 (256)
|+.|.++++++|++|++|++|||+..|+.+|+++|+.++++.++... .+|+++++++.||..+|..+.
T Consensus 144 ~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll~~l~ 221 (222)
T d2fdra1 144 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMA 221 (222)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHHHHT
T ss_pred HHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999876422 359999999999999998764
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.96 E-value=9.3e-29 Score=195.26 Aligned_cols=125 Identities=26% Similarity=0.405 Sum_probs=112.5
Q ss_pred CCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHH
Q 025190 88 LIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKL 165 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~ 165 (256)
...++||+.++|+.|++... ++||+....++..++.+|+.++|+.++++++.+. +||+|++|..
T Consensus 98 ~~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~--------------~KP~~~~~~~ 163 (230)
T d1x42a1 98 YGELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGF--------------FKPHPRIFEL 163 (230)
T ss_dssp HCCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTB--------------CTTSHHHHHH
T ss_pred hCcccccHHHHHHHhhccCceeeeeccccccchhhhcccccccccccccccccccc--------------cchhhHHHHH
Confidence 35789999999999976432 8999999999999999999999999999999886 8999999999
Q ss_pred HHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC----CCCCCeeeCCcCchHHhHHHH
Q 025190 166 ALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN----VGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 166 ~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~----~~~~~~~~~~~~el~~~l~~~ 226 (256)
+++++|++|++|++|||+. +|+.+|+++|+.++++++... ...+++++.++.||.++|+++
T Consensus 164 ~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~l 229 (230)
T d1x42a1 164 ALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229 (230)
T ss_dssp HHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHHHHH
T ss_pred HHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHHHHc
Confidence 9999999999999999996 899999999999999976532 246899999999999999764
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.96 E-value=1.1e-29 Score=196.88 Aligned_cols=192 Identities=17% Similarity=0.252 Sum_probs=142.4
Q ss_pred eEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH---HHHHHcCCCCChhhHhhhhhc
Q 025190 6 NCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL---AGLRALGYDIGADDYHGFVHG 82 (256)
Q Consensus 6 k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 82 (256)
++++||+||||+|+.+.+..++++ ..+.+|.+........ .....+... ......+ ...+.+......
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 72 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEE-----TFAQFSIPYDKEKVRE--FIFKYSVQDLLVRVAEDRN--LDVEVLNQVRAQ 72 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHH-----HHHHHTCCCCHHHHHH--HHHHSCHHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred EEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCHHHHHH--hhcccccccccccccchhh--hhHHHHHHHHHH
Confidence 689999999999998888888876 5566776543322211 111111111 1111111 222222222211
Q ss_pred CC--CCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCC
Q 025190 83 RL--PYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLK 157 (256)
Q Consensus 83 ~~--~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~K 157 (256)
.. ......++||+.++|+.|+++|+ ++||+.. .+..+++++|+.++|+.++++++.+. +|
T Consensus 73 ~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~--------------~K 137 (204)
T d2go7a1 73 SLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFV--------------RK 137 (204)
T ss_dssp HHTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCC--------------CT
T ss_pred HHHhhcccCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccc--------------cc
Confidence 11 23457889999999999999987 8888765 45678999999999999999988876 89
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhH
Q 025190 158 PSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVV 223 (256)
Q Consensus 158 p~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l 223 (256)
|+|.+|..++++++++|++|++|||+.+|+.+|+++|+.++++.++. ..+++.+.++.++.+++
T Consensus 138 p~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~--~~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 138 PSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST--YEGNHRIQALADISRIF 201 (204)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS--CTTEEECSSTTHHHHHT
T ss_pred hhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC--CCcCeecCCHHHHHHHh
Confidence 99999999999999999999999999999999999999999997663 45788899988887765
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.96 E-value=7.1e-28 Score=191.46 Aligned_cols=127 Identities=23% Similarity=0.412 Sum_probs=115.2
Q ss_pred CCCCCCChhHHHHHHhhhcCcE-EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 86 YDLIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
+....++|++.+.|+.|++.++ ++||+....++..++..++..+||.++++++.+. +||+|++|.
T Consensus 89 ~~~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~--------------~KP~p~~f~ 154 (245)
T d1qq5a_ 89 YNRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV--------------FKPHPDSYA 154 (245)
T ss_dssp GGSCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC--------------CTTSHHHHH
T ss_pred ccccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhhcccccccccccccccccc--------------cCccHHHHH
Confidence 3467889999999999998877 9999999999999999999999999999999886 799999999
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC----------------------------CCCCCCeeeCCc
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV----------------------------NVGEADYALENV 216 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~----------------------------~~~~~~~~~~~~ 216 (256)
.+++++|++|++|++|||+.+||.+|+++||++|||+++. ....||++++++
T Consensus 155 ~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l 234 (245)
T d1qq5a_ 155 LVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPAL 234 (245)
T ss_dssp HHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSG
T ss_pred HHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCH
Confidence 9999999999999999999999999999999999997531 124699999999
Q ss_pred CchHHhHHHH
Q 025190 217 NNLPQVVPEI 226 (256)
Q Consensus 217 ~el~~~l~~~ 226 (256)
.||+++|+.+
T Consensus 235 ~el~~lv~~~ 244 (245)
T d1qq5a_ 235 GDLPRLVRGM 244 (245)
T ss_dssp GGHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998764
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=5.6e-28 Score=192.54 Aligned_cols=212 Identities=17% Similarity=0.234 Sum_probs=147.9
Q ss_pred CCCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHH---HHHHHH----hhhh---------HHHHH
Q 025190 2 DSPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLR---VELFKA----YGST---------LAGLR 65 (256)
Q Consensus 2 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~---------~~~~~ 65 (256)
|+++|+|+||+||||+|+......++.+.++.+ ...++.......... ...... +... ...+.
T Consensus 3 m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (247)
T d2gfha1 3 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLL-QSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQ 81 (247)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHH-HHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEcCCCCcCcChHHHHHHHHHHHHHh-ccccCcHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHH
Confidence 368999999999999998877777777655532 233333222111100 000000 0000 01111
Q ss_pred HcCCCCChhhHhhh----hhcCCCCCCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEecccC
Q 025190 66 ALGYDIGADDYHGF----VHGRLPYDLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETM 139 (256)
Q Consensus 66 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~ 139 (256)
..........+... +... ......++||+.++|+.|++.+. ++||+....++..++++|+.++|+.++++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~ 160 (247)
T d2gfha1 82 ETKGGADNRKLAEECYFLWKST-RLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQ 160 (247)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHH-HHHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGS
T ss_pred HhccccchHHHHHHHHHHHHHh-hhccCccCccHHHHHHHhhcccceEEeecccchhhhhhhhhcccccccccccccccc
Confidence 11222222221111 1110 12456899999999999996543 89999999999999999999999999999998
Q ss_pred CcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEE-EEcCCC-----CCCCCCee
Q 025190 140 NPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTV-LVGKTV-----NVGEADYA 212 (256)
Q Consensus 140 ~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v-~v~~~~-----~~~~~~~~ 212 (256)
+. +||+|.+|..+++++|++|++|++|||+. +|+.+|+++|++++ +++... ....|+++
T Consensus 161 ~~--------------~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~ 226 (247)
T d2gfha1 161 KE--------------EKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYM 226 (247)
T ss_dssp SS--------------CTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEE
T ss_pred cc--------------chhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEE
Confidence 86 89999999999999999999999999997 79999999999855 554332 33569999
Q ss_pred eCCcCchHHhHHHHHhc
Q 025190 213 LENVNNLPQVVPEIWVS 229 (256)
Q Consensus 213 ~~~~~el~~~l~~~~~~ 229 (256)
+.++.+|.++|+.+-..
T Consensus 227 i~~l~eL~~ll~~i~~~ 243 (247)
T d2gfha1 227 VSSVLELPALLQSIDCK 243 (247)
T ss_dssp ESSGGGHHHHHHHHTTC
T ss_pred ECCHHHHHHHHHHHhhh
Confidence 99999999999887543
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.96 E-value=4.7e-29 Score=196.66 Aligned_cols=204 Identities=16% Similarity=0.183 Sum_probs=146.1
Q ss_pred CeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHH---------HHHHHHHHHHhhhhHHHHHHcCCCCChhh
Q 025190 5 FNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKA---------SSLRVELFKAYGSTLAGLRALGYDIGADD 75 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
.|+|+||+||||+|+...+..++.+++.+. ++...... .......+...+......... .....+.
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 76 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEV----YGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADK-FDKAKET 76 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHH----HSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHH-HHHHHHH
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHH----cCCCccHHHHHHhcCchHHHHHHHHHHhCCChHHHHHH-HHHHHHH
Confidence 589999999999999998888888765543 22211100 011111111111111100000 0001112
Q ss_pred HhhhhhcCCCCCCCCCChhHHHHHHhhhcCc-E---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 76 YHGFVHGRLPYDLIKPDPQLRNLLCSITQRK-I---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 76 ~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~-~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
+...+.+........++||+.++|+.|+++| + ++||+....++..++.+|+.++|+.++++++...
T Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~---------- 146 (228)
T d2hcfa1 77 YIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALD---------- 146 (228)
T ss_dssp HHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSS----------
T ss_pred HHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccccccccccccc----------
Confidence 2223333333455688999999999999886 5 8899999999999999999999999999988765
Q ss_pred CCCCCCCCHHHHHHHHHHc---CCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC------CCCCCCeeeCCcCchHHh
Q 025190 152 FPVLLKPSMDAMKLALHVA---NVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV------NVGEADYALENVNNLPQV 222 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~---~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~------~~~~~~~~~~~~~el~~~ 222 (256)
.||+|..+...+..+ +++|++|++|||+.+|+.+|+++|+++|+|.++. ...+|+++++++.||.++
T Consensus 147 ----~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~ 222 (228)
T d2hcfa1 147 ----RNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEV 222 (228)
T ss_dssp ----GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHH
T ss_pred ----ccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHH
Confidence 689988877666665 7899999999999999999999999999998654 345799999999999999
Q ss_pred HHHHH
Q 025190 223 VPEIW 227 (256)
Q Consensus 223 l~~~~ 227 (256)
|..++
T Consensus 223 l~~l~ 227 (228)
T d2hcfa1 223 LASIL 227 (228)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98765
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.96 E-value=4e-29 Score=196.00 Aligned_cols=204 Identities=21% Similarity=0.288 Sum_probs=144.8
Q ss_pred CCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhh--hH-HHHHHcCCCCChhhHhh--
Q 025190 4 PFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGS--TL-AGLRALGYDIGADDYHG-- 78 (256)
Q Consensus 4 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~-- 78 (256)
|+|+|+||+||||+|+...+..++.+ ++..+|++......... ....+. .. ..........+.+.+..
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKA-----LAEEIGINGVDRQFNEQ--LKGVSREDSLQKILDLADKKVSAEEFKELA 73 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHH-----HHHHTTCCCCCHHHHTT--TTTCCHHHHHHHHHTTSSSCCCHHHHHHHH
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHH-----HHHHcCCCCChHHHHHH--HhhccchhhhhhccccccccchhhhhhhHH
Confidence 57999999999999988777777776 55666765433221110 000010 01 11112223344433322
Q ss_pred -----hhhcCC-CCCCCCCChhHHHHHHhhhcCcE-EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCC
Q 025190 79 -----FVHGRL-PYDLIKPDPQLRNLLCSITQRKI-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDE 151 (256)
Q Consensus 79 -----~~~~~~-~~~~~~~~pg~~~~l~~l~~~~~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~ 151 (256)
.+.+.. ......++||+.++|+.|++.++ +++.+.....+..++.+|+.++|+.++++++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~~~~~l~~~~l~~~f~~i~~~~~~~~---------- 143 (221)
T d1o08a_ 74 KRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPAEVAA---------- 143 (221)
T ss_dssp HHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTTHHHHHHHTTCGGGCSEECCTTTSSS----------
T ss_pred HHHHhhccccccccccccccCCceeccccccccccceEEEeecchhhHHHHhhccccccccccccccccc----------
Confidence 111111 12346789999999999999987 3333333557889999999999999999988886
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCch-HHhHHHHHh
Q 025190 152 FPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNL-PQVVPEIWV 228 (256)
Q Consensus 152 ~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el-~~~l~~~~~ 228 (256)
+||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+++|+|+++.....++.+++++.++ .+.|++++.
T Consensus 144 ----~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~l~el~~ 217 (221)
T d1o08a_ 144 ----SKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWL 217 (221)
T ss_dssp ----CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGGGCCHHHHHHHHH
T ss_pred ----cccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChhhcccccEEcCCcccCCHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999876666677777777664 355666553
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.95 E-value=8.9e-28 Score=187.98 Aligned_cols=122 Identities=18% Similarity=0.330 Sum_probs=110.9
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
....++|++.++++.++++++ ++||+.....+..++..++..+||.++++++.+. .||+|..|
T Consensus 90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~--------------~KP~p~~~ 155 (220)
T d1zrna_ 90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV--------------YKPDNRVY 155 (220)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC--------------CTTSHHHH
T ss_pred ccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeec--------------cccHHHHH
Confidence 456789999999999999876 9999999999999999999999999999999887 79999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC-----CCCCCeeeCCcCchHHh
Q 025190 164 KLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN-----VGEADYALENVNNLPQV 222 (256)
Q Consensus 164 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~~~~~~~~~~el~~~ 222 (256)
..+++++|++|++|+||||+..|+.+|+++|+.+|+++++.. ...||++++++.+|.++
T Consensus 156 ~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 156 ELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp HHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence 999999999999999999999999999999999999975532 35589999999888764
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.94 E-value=2.8e-27 Score=181.03 Aligned_cols=172 Identities=17% Similarity=0.211 Sum_probs=128.2
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhH-HHHHHcCCC--CChhhHhhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTL-AGLRALGYD--IGADDYHGF 79 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~ 79 (256)
|++|+|+||+||||+|+...+..++.+ .++.+|++...... ....+... ..+...... ...+.+...
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVE-----TLALYGITQDHDSV-----YQALKVSTPFAIETFAPNLENFLEKYKEN 70 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHH-----HHHHHHCHHHHHHHHCTTCTTHHHHHHHH
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHH-----HHHHcCCCccHHHH-----HhhhhccchhhhhhhhHHHHHHHHHHHHH
Confidence 579999999999999988887788776 55677876543322 11222211 122222221 112223332
Q ss_pred hhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCC
Q 025190 80 VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 80 ~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
.... .....++||+.++|+.|+++|+ ++||+..... ..++++++.++|+.++++++... .
T Consensus 71 ~~~~--~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~--------------~ 133 (187)
T d2fi1a1 71 EARE--LEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFK--------------R 133 (187)
T ss_dssp HHHH--TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCC--------------C
T ss_pred HHHH--hhcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccc--------------c
Confidence 2221 3466889999999999999986 8888776554 57999999999999999998876 7
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
||+|+.|..+++++++ +++++|||+..|+.+|+++|+++++++.+
T Consensus 134 KP~p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~ 178 (187)
T d2fi1a1 134 KPNPESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSI 178 (187)
T ss_dssp TTSCHHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred CCCHHHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 9999999999999987 45999999999999999999999999754
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=8.1e-25 Score=173.63 Aligned_cols=120 Identities=10% Similarity=0.069 Sum_probs=103.2
Q ss_pred CCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEec-ccCCcccccCCCCCCCCCCCCCCHH
Q 025190 86 YDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICF-ETMNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~-~~~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
.....++||+.++|++|+++|+ ++||+.....+..++..|+.++++..... +.... .||+|.
T Consensus 123 ~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--------------~KP~p~ 188 (253)
T d1zs9a1 123 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIG--------------HKVESE 188 (253)
T ss_dssp SCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGC--------------CTTCHH
T ss_pred hcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccc--------------cCCCcH
Confidence 3456889999999999999987 99999999999999999999888765443 33332 799999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCC------CCCCeeeCCcCch
Q 025190 162 AMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNV------GEADYALENVNNL 219 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~------~~~~~~~~~~~el 219 (256)
+|..+++++|++|++|++|||+.+|+.+|+++||++|+|.++... ..++.+++|+.||
T Consensus 189 ~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 189 SYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred HHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 999999999999999999999999999999999999999765432 3367889998887
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=3e-24 Score=167.80 Aligned_cols=102 Identities=21% Similarity=0.304 Sum_probs=91.0
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecC----ChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNS----DRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~----~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
...++|++.++|..|+++++ ++|++ .....+..+...++.++||.++++++++. +||+|
T Consensus 95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~--------------~KP~p 160 (222)
T d1cr6a1 95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGM--------------IKPEP 160 (222)
T ss_dssp TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSC--------------CTTCH
T ss_pred cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccC--------------CCCCh
Confidence 45789999999999999986 77764 34455667788899999999999999886 89999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
++|..++++++++|++|+||||+..|+.+|+++|+++|+|.++
T Consensus 161 ~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~ 203 (222)
T d1cr6a1 161 QIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNT 203 (222)
T ss_dssp HHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSS
T ss_pred HHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCc
Confidence 9999999999999999999999999999999999999998654
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=1.8e-23 Score=156.29 Aligned_cols=99 Identities=15% Similarity=0.231 Sum_probs=87.9
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCCh-HHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDR-NHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDA 162 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~-~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 162 (256)
..+.++||+.++|+.|+++|+ ++|++.. ...+..++.+++..+|+.+... .||+|..
T Consensus 43 ~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~-------------------~kp~~~~ 103 (164)
T d1u7pa_ 43 QNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY-------------------PGSKVTH 103 (164)
T ss_dssp CEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEES-------------------SSCHHHH
T ss_pred cccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecc-------------------cCCChHH
Confidence 457899999999999999997 8887765 4567788999999888887652 6999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 163 MKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 163 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
+.++++++|++|+++++|||+..|+.+|+++|+.+|+|.++.
T Consensus 104 ~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~ 145 (164)
T d1u7pa_ 104 FERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGM 145 (164)
T ss_dssp HHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCC
T ss_pred HHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC
Confidence 999999999999999999999999999999999999998763
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=3.7e-23 Score=161.19 Aligned_cols=103 Identities=23% Similarity=0.270 Sum_probs=89.8
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHH----HHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNH----AITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPS 159 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~----~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~ 159 (256)
....++||+.++|..|+++|+ ++||+.... .+......++.++||.++++++.+. +||+
T Consensus 96 ~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~--------------~KP~ 161 (225)
T d1zd3a1 96 SARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGM--------------VKPE 161 (225)
T ss_dssp HHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTC--------------CTTC
T ss_pred hcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEecccccc--------------chhH
Confidence 345789999999999999986 889875443 3444556678899999999999887 8999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 160 MDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
|++|+++++.+|++|+++++|||+..|+.+|+++|+++|++.++
T Consensus 162 ~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~ 205 (225)
T d1zd3a1 162 PQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 205 (225)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred HHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence 99999999999999999999999999999999999999999754
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.88 E-value=2.5e-24 Score=168.31 Aligned_cols=117 Identities=16% Similarity=0.169 Sum_probs=92.9
Q ss_pred CCCCCChhHHHHHHhhhcCcEEEecCChHHHHH-----------HHHhcCcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKIIFTNSDRNHAIT-----------CLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~ivs~~~~~~~~~-----------~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
....+++++.+++..++..++ .++........ .++.+|+.++|+.+++++..+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~--------------- 157 (225)
T d2g80a1 94 IKAPVYADAIDFIKRKKRVFI-YSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG--------------- 157 (225)
T ss_dssp CCBCCCHHHHHHHHHCSCEEE-ECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC---------------
T ss_pred ccccchhhHHHHHhhHHhhhh-hhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccC---------------
Confidence 455789999999988777543 44443333332 345678889999999887654
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC----CCCCCeeeCCcCch
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN----VGEADYALENVNNL 219 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~----~~~~~~~~~~~~el 219 (256)
.||+|.+|..+++++|++|++|++|||+.+|+.+|+++||.+|+++++.. ...+..++.++.||
T Consensus 158 ~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 158 KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred CCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 69999999999999999999999999999999999999999999986542 24466678888775
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=9.1e-23 Score=155.47 Aligned_cols=102 Identities=22% Similarity=0.421 Sum_probs=92.3
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc-CcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL-EIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~-gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
..+++++.+++..++.+++ ++||+........+..+ ++..+|+.++++++.+. +||+|.+|.
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~--------------~Kp~~~~~~ 148 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGM--------------RKPEARIYQ 148 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTC--------------CTTCHHHHH
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccc--------------cccchHHHH
Confidence 4688999999999999886 88888877777777775 88899999999999887 899999999
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
.+++++|++|++|++|||+.+|+++|+++|+++++++++.
T Consensus 149 ~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 149 HVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred HHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 9999999999999999999999999999999999997653
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.83 E-value=3.7e-21 Score=150.66 Aligned_cols=137 Identities=9% Similarity=0.007 Sum_probs=101.0
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce---eEecccCCcccccCCCCCCCCCCCCCCH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ---IICFETMNPNLSKATRPDEFPVLLKPSM 160 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~---i~~~~~~~~~~~~~~~~~~~~~~~Kp~~ 160 (256)
..++++||+.++++.|+++|+ ++|++....++.+++++|+.++|.. .+..+... ...........+++++
T Consensus 72 ~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~----~~~~~~~~~~~~~~k~ 147 (226)
T d2feaa1 72 EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIH----IDWPHSCKGTCSNQCG 147 (226)
T ss_dssp HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCE----EECTTCCCTTCCSCCS
T ss_pred hccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcce----eccccccccccccCCH
Confidence 346789999999999999986 9999999999999999998776632 11111110 1111123344467778
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC---CCCCCCCeeeCCcCchHHhHHHHH
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT---VNVGEADYALENVNNLPQVVPEIW 227 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~---~~~~~~~~~~~~~~el~~~l~~~~ 227 (256)
.....+++++++++++++|||||.+|+++|++||+.++..... .+...+...+.++.++...|+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 217 (226)
T d2feaa1 148 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVK 217 (226)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSH
T ss_pred HHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999765432211 233456677889888887776543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.82 E-value=1.2e-20 Score=145.34 Aligned_cols=200 Identities=13% Similarity=0.167 Sum_probs=129.6
Q ss_pred CCCeEEEEecCCCccCCCccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhhHHH---HHHcCCCCChhhHhhh
Q 025190 3 SPFNCLVFDLDDTLYPSETGIAAAVKRNIEGFLIEKCGFSETKASSLRVELFKAYGSTLAG---LRALGYDIGADDYHGF 79 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 79 (256)
++.|+|+||+||||+|++. +.. +++..|...... ................ ................
T Consensus 2 ~kkKlv~FDlDGTL~d~es-----~~~-----l~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (210)
T d1j97a_ 2 KKKKLILFDFDSTLVNNET-----IDE-----IAREAGVEEEVK-KITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKA 70 (210)
T ss_dssp CCCCEEEECCCCCCBSSCH-----HHH-----HHHHTTCHHHHH-HHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHH
T ss_pred CCCeEEEEeCCCCcCCchH-----HHH-----HHHHcCCcHHHH-HHHHHHhcccchhHHHHHHHHHHHhhhHHHHHHHH
Confidence 4679999999999999863 332 455666643221 1111111111111111 1111111222222222
Q ss_pred hhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCC
Q 025190 80 VHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLL 156 (256)
Q Consensus 80 ~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
.....+++|+.++++.++.+|. ++|+.....+....+..+...++...+..++.... .........+
T Consensus 71 ------~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 140 (210)
T d1j97a_ 71 ------IKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLT----GDVEGEVLKE 140 (210)
T ss_dssp ------HHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE----EEEECSSCST
T ss_pred ------hhhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccccc----cccccccccc
Confidence 2445788999999999999986 88888888889899988887777655544433210 0011233456
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCc--CchHHhH
Q 025190 157 KPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENV--NNLPQVV 223 (256)
Q Consensus 157 Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~--~el~~~l 223 (256)
++++..+..++++++++++++++||||.||++|++.+|++.++.+.+..+..+++++++. .+|.++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 141 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEESCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEECCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 788899999999999999999999999999999999999887733334446799999854 4555544
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=5.7e-21 Score=141.49 Aligned_cols=107 Identities=14% Similarity=0.262 Sum_probs=76.9
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCC---------------hHHHHHHHHhcCcccccceeEecccCCcccccCCC
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSD---------------RNHAITCLKRLEIADCFDQIICFETMNPNLSKATR 148 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~---------------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~ 148 (256)
..+.++||+.++|+.|+++|+ ++||.+ ...+...+...|+. ++.++.+.....
T Consensus 27 ~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~i~~~~~~~~------- 97 (161)
T d2fpwa1 27 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPA------- 97 (161)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGG-------
T ss_pred HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc--cceeeecccccc-------
Confidence 456789999999999999998 899864 12334455666653 333332211111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC
Q 025190 149 PDEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV 204 (256)
Q Consensus 149 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~ 204 (256)
.....+||+|.++.++++++++++++++||||+..|+++|+++||+++++++..
T Consensus 98 --~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~ 151 (161)
T d2fpwa1 98 --DECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 151 (161)
T ss_dssp --GCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred --ccccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence 111237999999999999999999999999999999999999999999997664
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=6.5e-20 Score=138.93 Aligned_cols=133 Identities=16% Similarity=0.166 Sum_probs=93.1
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChH---------------HHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRN---------------HAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~---------------~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
.++++||+.++|+.|+++|+ ++||.... .+...+...+.. ..+..++........ ..-
T Consensus 25 ~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~cp~~p~~~~---~~~ 100 (182)
T d2gmwa1 25 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-LDGIYYCPHHPQGSV---EEF 100 (182)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-CSEEEEECCBTTCSS---GGG
T ss_pred HeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccc-ccceeeccccccccc---ccc
Confidence 45788999999999999987 88986531 122223333332 223333332211100 000
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeE-EEEcCCCCC-----CCCCeeeCCcCchHHhH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRT-VLVGKTVNV-----GEADYALENVNNLPQVV 223 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~-v~v~~~~~~-----~~~~~~~~~~~el~~~l 223 (256)
......+||+|.++..+++++++++++++||||+.+|+++|+++|+++ +++..+... ..|+++++++.||.++|
T Consensus 101 ~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~i 180 (182)
T d2gmwa1 101 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 180 (182)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred cccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHHh
Confidence 122335799999999999999999999999999999999999999975 666655422 35999999999999887
Q ss_pred H
Q 025190 224 P 224 (256)
Q Consensus 224 ~ 224 (256)
+
T Consensus 181 k 181 (182)
T d2gmwa1 181 K 181 (182)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.81 E-value=4.2e-20 Score=142.55 Aligned_cols=130 Identities=15% Similarity=0.206 Sum_probs=89.7
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCC---------------hHHHHHHHHhcCcccccceeEecccCCcccccCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSD---------------RNHAITCLKRLEIADCFDQIICFETMNPNLSKATRP 149 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~---------------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~ 149 (256)
.++++||+.++|++|+++|+ ++||.. ...+...++..|. +++.++........ .+...
T Consensus 46 ~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~--~~~~~~~~~~~~~~--~~~~~ 121 (209)
T d2o2xa1 46 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV--FVDMVLACAYHEAG--VGPLA 121 (209)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC--CCSEEEEECCCTTC--CSTTC
T ss_pred HeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhccc--ccceEEEecccccc--ccccc
Confidence 34689999999999999987 899832 1122333444443 24444433211100 00000
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHH
Q 025190 150 DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQ 221 (256)
Q Consensus 150 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~ 221 (256)
......+||+|.++..+++++++++++++||||+.+|+++|+++|++++++..+.....+++.+.++.++.+
T Consensus 122 ~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~~~~~~~~~~~~~e 193 (209)
T d2o2xa1 122 IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSE 193 (209)
T ss_dssp CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHH
T ss_pred ccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcccCCccccCccchhH
Confidence 111224699999999999999999999999999999999999999999999877766566777666655444
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=9.5e-21 Score=147.64 Aligned_cols=130 Identities=11% Similarity=0.117 Sum_probs=89.5
Q ss_pred CCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEeccc--CCcccccCCCCCCCCCCCCCCHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFET--MNPNLSKATRPDEFPVLLKPSMD 161 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~--~~~~~~~~~~~~~~~~~~Kp~~~ 161 (256)
....++||+.++++.|+++|+ +||++....++.+++.+|++.+ .+++..- ...+.+.+.....+....+.|..
T Consensus 79 ~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~--~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~ 156 (217)
T d1nnla_ 79 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANRLKFYFNGEYAGFDETQPTAESGGKGK 156 (217)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEECEEECTTSCEEEECTTSGGGSTTHHHH
T ss_pred hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCccc--ceeeeeeeeeehhccccceeeeeeeccchHHH
Confidence 346789999999999999997 9999999999999999998742 1221110 00000111111122233444667
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC---CCCCCeeeCCcCchH
Q 025190 162 AMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN---VGEADYALENVNNLP 220 (256)
Q Consensus 162 ~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~---~~~~~~~~~~~~el~ 220 (256)
.++.+.+++ ++++|++||||.+|+.+++.+|+++++-+.... ...+++++.++.||.
T Consensus 157 ~v~~~~~~~--~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~ell 216 (217)
T d1nnla_ 157 VIKLLKEKF--HFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELL 216 (217)
T ss_dssp HHHHHHHHH--CCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred HHHHHHhcc--CccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHhc
Confidence 777766654 568999999999999999999987665443332 245899999998874
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=1.7e-20 Score=149.37 Aligned_cols=66 Identities=24% Similarity=0.332 Sum_probs=58.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC--------CCCCCeeeCCcCchH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN--------VGEADYALENVNNLP 220 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~~~~~~~~~~el~ 220 (256)
.+||+|.+|.++++++|++|++|++|||++ +||.+|+++||++++|.+|.. ...||++++++.||+
T Consensus 174 ~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~ 248 (250)
T d2c4na1 174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred cccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence 379999999999999999999999999998 599999999999999976531 245899999999975
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.78 E-value=7.9e-20 Score=146.24 Aligned_cols=71 Identities=20% Similarity=0.303 Sum_probs=63.4
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC--------CCCCCeeeCCcCchHHhH
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN--------VGEADYALENVNNLPQVV 223 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~~~~~~~~~~el~~~l 223 (256)
...+||+|.++..+++++|++|++++||||++ +||.+|+++|+++|||.++.. ...||++++++.||.++|
T Consensus 181 ~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l 260 (261)
T d1vjra_ 181 LIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 260 (261)
T ss_dssp EECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred cccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 34579999999999999999999999999997 699999999999999987642 346899999999998876
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.75 E-value=7.7e-18 Score=133.96 Aligned_cols=65 Identities=26% Similarity=0.354 Sum_probs=57.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCCC--------CCCCCeeeCCcCch
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTVN--------VGEADYALENVNNL 219 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~~~~~~~~~~el 219 (256)
.+||+|.+|.++++++|++|++|+||||++ +||.+|+++||++|+|.++.. ...||++++|+.|+
T Consensus 178 ~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 178 IGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp CSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred eccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 369999999999999999999999999998 599999999999999976531 23579999999876
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.72 E-value=1.8e-18 Score=137.60 Aligned_cols=65 Identities=18% Similarity=0.346 Sum_probs=57.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHHHcCCeEEEEcCCC--------CCCCCCeeeCCcCch
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNI-KNVTAGKALGLRTVLVGKTV--------NVGEADYALENVNNL 219 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~G~~~v~v~~~~--------~~~~~~~~~~~~~el 219 (256)
.+||+|.+|.++++++|++|++|+||||++ +||.+|+++||++++|.++. ....||++++|+.|+
T Consensus 178 ~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~ 251 (253)
T d1yv9a1 178 IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 251 (253)
T ss_dssp CSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred ecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence 389999999999999999999999999997 69999999999999996553 123589999999886
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.65 E-value=2.3e-16 Score=132.33 Aligned_cols=136 Identities=15% Similarity=0.218 Sum_probs=108.2
Q ss_pred CCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccce--eEecccCCcccccCCCCCCCCCCCCCCHHHH
Q 025190 89 IKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQ--IICFETMNPNLSKATRPDEFPVLLKPSMDAM 163 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~--i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 163 (256)
+.|.||+.++|+.|+++|+ ++||.....++..++++|+.++|+. ++++++.... ...........||+|..+
T Consensus 214 i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~---~~~~~~~~~~~KP~p~~~ 290 (380)
T d1qyia_ 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA---ENMYPQARPLGKPNPFSY 290 (380)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH---HHHSTTSCCCCTTSTHHH
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhh---hhhccccccccCCChHHH
Confidence 4578899999999999998 9999999999999999999999964 5555543100 000012233489999999
Q ss_pred HHHHHHc--------------CCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCC---------CCCCCeeeCCcCchH
Q 025190 164 KLALHVA--------------NVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVN---------VGEADYALENVNNLP 220 (256)
Q Consensus 164 ~~~~~~~--------------~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~---------~~~~~~~~~~~~el~ 220 (256)
..++... +.++++|+||||+.+|+.+|+++|+.+|+|..+.. +..||++++++.+|.
T Consensus 291 ~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~ 370 (380)
T d1qyia_ 291 IAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELR 370 (380)
T ss_dssp HHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHH
T ss_pred HHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHH
Confidence 9887654 56788999999999999999999999999976542 247999999999999
Q ss_pred HhHHHHH
Q 025190 221 QVVPEIW 227 (256)
Q Consensus 221 ~~l~~~~ 227 (256)
++|..++
T Consensus 371 ~il~~l~ 377 (380)
T d1qyia_ 371 GVLDNLL 377 (380)
T ss_dssp HHHSCTT
T ss_pred HHHHHHH
Confidence 9886654
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.61 E-value=5.9e-16 Score=118.28 Aligned_cols=127 Identities=7% Similarity=0.019 Sum_probs=91.1
Q ss_pred CCCCCChhHHHHHHhhhcCcE--EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHH
Q 025190 87 DLIKPDPQLRNLLCSITQRKI--IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMK 164 (256)
Q Consensus 87 ~~~~~~pg~~~~l~~l~~~~~--ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~ 164 (256)
......++...++..++.... ++|++...........++....+...+....... ......+++....
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~~~~~~~ 135 (206)
T d1rkua_ 66 ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR----------VVGYQLRQKDPKR 135 (206)
T ss_dssp TTCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC----------EEEEECCSSSHHH
T ss_pred hhccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccc----------cccccccchhhHH
Confidence 455778888888888876554 8899999999999999888765544332222111 1111334446678
Q ss_pred HHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCee-eCCcCchHHhHH
Q 025190 165 LALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYA-LENVNNLPQVVP 224 (256)
Q Consensus 165 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~-~~~~~el~~~l~ 224 (256)
..+++++++++++++|||+.||++|.+.+|++.++ +... .+..++++ ..+.++|.+.|.
T Consensus 136 ~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~~~~~d~~~~~~ 197 (206)
T d1rkua_ 136 QSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred HHHHHhcccccceEEecCCccCHHHHHhCCccEEE-CCCHHHHHhCCCceeecCHHHHHHHHH
Confidence 88999999999999999999999999999999988 5442 33456775 566777765553
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.58 E-value=1e-15 Score=111.50 Aligned_cols=101 Identities=9% Similarity=-0.023 Sum_probs=70.7
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChH---HHHHHHHhcC------cccccceeEecccCCcccccCCCCCCCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRN---HAITCLKRLE------IADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~---~~~~~l~~~g------l~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
...++||+.++|+.|+++|+ ++||.... .....++..+ ....++.........
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 98 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGD--------------- 98 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTC---------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccc---------------
Confidence 34789999999999999987 88987532 2222233221 112234444333222
Q ss_pred CCCCHHHHHHHHHHcCCCCCcE-EEEcCCccccHHHHHcCCeEEEEcCC
Q 025190 156 LKPSMDAMKLALHVANVDPRHA-LFLDDNIKNVTAGKALGLRTVLVGKT 203 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~-i~vGDs~~Di~~a~~~G~~~v~v~~~ 203 (256)
.+|+.......++++..+..++ ++|||+..|+++|+++|++++.|.++
T Consensus 99 ~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 99 TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred cCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 5777788888888877766664 67899999999999999999999876
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.44 E-value=4.7e-13 Score=103.62 Aligned_cols=73 Identities=14% Similarity=0.186 Sum_probs=57.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC-CCCCCCCCeeeCCcCc--hHHhHHHHH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK-TVNVGEADYALENVNN--LPQVVPEIW 227 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~-~~~~~~~~~~~~~~~e--l~~~l~~~~ 227 (256)
.+.+|+.+++.++++++++++++++|||+.||+.|++.+|+++++.+. +..+..+++++.+..+ +.+.|..++
T Consensus 149 ~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 149 PWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp TTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred CCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence 478889999999999999999999999999999999999987654332 2344668999876543 556666555
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.36 E-value=8.3e-13 Score=105.06 Aligned_cols=71 Identities=8% Similarity=0.093 Sum_probs=56.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
+-.|..+++.+++.++++++++++|||+.||+.|.+.+|...++-+.. ..+..+++++.+..+ +.+.|+++
T Consensus 195 ~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~ 268 (271)
T d1rkqa_ 195 RVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKY 268 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHH
T ss_pred CCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHH
Confidence 335778999999999999999999999999999999999777654422 233557888887776 66666554
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.33 E-value=1.6e-13 Score=106.50 Aligned_cols=63 Identities=6% Similarity=-0.029 Sum_probs=50.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC-CCCCCCCCeeeCCcCc
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK-TVNVGEADYALENVNN 218 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~-~~~~~~~~~~~~~~~e 218 (256)
+..|..+++++++++|++++++++||||.||+.+++.+|+.+++.+. +..+..+++++++...
T Consensus 149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~ 212 (225)
T d1l6ra_ 149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYG 212 (225)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTT
T ss_pred ccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCc
Confidence 45677899999999999999999999999999999999976664332 2233458888766643
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.25 E-value=5.7e-12 Score=100.76 Aligned_cols=71 Identities=11% Similarity=0.068 Sum_probs=55.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHH
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEI 226 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~ 226 (256)
+-.|..+++++++++|++++++++|||+.||+.|.+.+|..+++-+.. ..+..|++++.+..+ +.++|+.+
T Consensus 211 ~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 211 KASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred cchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHh
Confidence 446779999999999999999999999999999999999777654432 334568888887654 44555443
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.23 E-value=8.5e-13 Score=105.00 Aligned_cols=73 Identities=15% Similarity=0.104 Sum_probs=57.9
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHHH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEIW 227 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~~ 227 (256)
.+-.|..++++++++++++++++++|||+.||++|.+.+|..+++-+.. ..+..|++++.+..+ +..+|++++
T Consensus 187 ~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll 262 (267)
T d1nf2a_ 187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS 262 (267)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred CCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999876544332 234668999988776 556665554
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.18 E-value=1.6e-11 Score=97.37 Aligned_cols=76 Identities=12% Similarity=0.077 Sum_probs=62.3
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc--hHHhHHHHHhcC
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN--LPQVVPEIWVSQ 230 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e--l~~~l~~~~~~~ 230 (256)
.+-.|..+++++++++|++++++++|||+.||++|.+.+|.++++-+.. ..+..|++++.+..+ +.+.|+.++...
T Consensus 187 ~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~ 265 (269)
T d1rlma_ 187 PGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNT 265 (269)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTC
T ss_pred CchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcC
Confidence 3456789999999999999999999999999999999999888865533 334668899888776 778888877543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.15 E-value=2.3e-10 Score=91.30 Aligned_cols=119 Identities=10% Similarity=0.086 Sum_probs=74.8
Q ss_pred CCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCC--cccc
Q 025190 70 DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMN--PNLS 144 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~--~~~~ 144 (256)
.++.+.+.....+ ..+.+.||+.++++.|+++++ ++|+|....++.+++++|+...--.+++..-.- ..+.
T Consensus 119 ~l~~~~i~~~v~~----~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~ 194 (291)
T d2bdua1 119 GIPKAKLKEIVAD----SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVL 194 (291)
T ss_dssp CCBGGGHHHHHHH----SCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBE
T ss_pred CCCHHHHHHHHHh----cCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeE
Confidence 3456666665543 467899999999999999987 999999999999999998753111233321100 0011
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHH--cCCCCCcEEEEcCCccccHHHHHcC
Q 025190 145 KATRPDEFPVLLKPSMDAMKLALHV--ANVDPRHALFLDDNIKNVTAGKALG 194 (256)
Q Consensus 145 ~~~~~~~~~~~~Kp~~~~~~~~~~~--~~~~~~~~i~vGDs~~Di~~a~~~G 194 (256)
+++.+. .....-+.......... ..-+..++|++|||.+|+.||..+.
T Consensus 195 ~~~~~~--~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~ 244 (291)
T d2bdua1 195 KGFKGE--LIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA 244 (291)
T ss_dssp EEECSS--CCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred eeccCC--ccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence 111111 11122222333333332 2335678999999999999998764
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.14 E-value=4.6e-11 Score=89.61 Aligned_cols=92 Identities=18% Similarity=0.248 Sum_probs=70.0
Q ss_pred CChhHHHHHHhhhcCcE---EEecC--------ChH----HHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCC
Q 025190 91 PDPQLRNLLCSITQRKI---IFTNS--------DRN----HAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVL 155 (256)
Q Consensus 91 ~~pg~~~~l~~l~~~~~---ivs~~--------~~~----~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
++|++.+.|+.|+++|+ ||||- ..+ ....+++.++.. +...++..... .
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~~~~~~--------------~ 114 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGL--------------N 114 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSS--------------S
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEecCccc--------------c
Confidence 46999999999999886 88883 222 234456666643 34444444333 4
Q ss_pred CCCCHHHHHHHHHHcC----CCCCcEEEEcCCc-----------------cccHHHHHcCCeEE
Q 025190 156 LKPSMDAMKLALHVAN----VDPRHALFLDDNI-----------------KNVTAGKALGLRTV 198 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~----~~~~~~i~vGDs~-----------------~Di~~a~~~G~~~v 198 (256)
+||++.++..++++++ ++.++++||||.. +|++.|+++|+++.
T Consensus 115 RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 115 RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp STTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred CCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 8999999999999985 7889999999953 89999999999965
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.11 E-value=1.9e-10 Score=89.32 Aligned_cols=68 Identities=7% Similarity=0.018 Sum_probs=50.1
Q ss_pred CCCCCCCHHHHHHHHHHc-CCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhH
Q 025190 153 PVLLKPSMDAMKLALHVA-NVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVV 223 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~-~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l 223 (256)
...+-.|..++..+++++ ++.++++++|||+.||++|.+.+|.++++-+...+ ..-.+.++.|+.+.|
T Consensus 174 ~~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na~~~---~~~~~~~i~~~~~~i 242 (243)
T d1wzca1 174 VHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHK---KAQNVSSIIDVLEVI 242 (243)
T ss_dssp EECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCT---TCEEESCHHHHHHHH
T ss_pred hhhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCCChH---HHhhhhHHHHHHHhh
Confidence 344556788999999998 48889999999999999999999977776543322 233455555555544
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.10 E-value=9.7e-11 Score=93.14 Aligned_cols=74 Identities=11% Similarity=0.148 Sum_probs=57.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc---hHHhHHHHHh
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN---LPQVVPEIWV 228 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e---l~~~l~~~~~ 228 (256)
.+..|...+..+++.++++++++++|||+.||+.|.+.+|.++++-+.. ..+..+++++.+-.+ +..+|+.++.
T Consensus 204 ~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~ 281 (283)
T d2b30a1 204 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD 281 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred CcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHc
Confidence 3567789999999999999999999999999999999999876654322 233557888865433 6677777653
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=7.2e-10 Score=85.21 Aligned_cols=48 Identities=8% Similarity=-0.035 Sum_probs=39.2
Q ss_pred CCCCCCCCCHHHHHHHHH---HcCCCCCcEEEEcCCccccHHHHHcCCeEE
Q 025190 151 EFPVLLKPSMDAMKLALH---VANVDPRHALFLDDNIKNVTAGKALGLRTV 198 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~---~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v 198 (256)
+.....-.|....+.+++ ++|++++++++|||+.||++|.+.+|.+++
T Consensus 177 ~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~va 227 (232)
T d1xvia_ 177 HVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVI 227 (232)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEE
T ss_pred eccCCCchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEE
Confidence 334455677788888776 468999999999999999999999997654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.01 E-value=1.8e-11 Score=96.77 Aligned_cols=73 Identities=5% Similarity=0.099 Sum_probs=55.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC-CCCCCCCCeeeCCcCc--hHHhHHH
Q 025190 153 PVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK-TVNVGEADYALENVNN--LPQVVPE 225 (256)
Q Consensus 153 ~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~-~~~~~~~~~~~~~~~e--l~~~l~~ 225 (256)
.+.+-.|..+++++++++|++++++++|||+.||+.|.+.+|..+++-+. +..+..++++..+..+ +.++|+.
T Consensus 181 ~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 181 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 44456788999999999999999999999999999999999987654432 2233557888877654 4455543
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=3.4e-10 Score=85.09 Aligned_cols=92 Identities=17% Similarity=0.202 Sum_probs=64.4
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCC---hHHHHHHHH-hcCccc--ccceeEecccCCcccccCCCCCCCCCCCCC
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSD---RNHAITCLK-RLEIAD--CFDQIICFETMNPNLSKATRPDEFPVLLKP 158 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~---~~~~~~~l~-~~gl~~--~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp 158 (256)
...|.||+.+|++.++++|+ .|||+. .+.....|+ .+|+.. .-+.++..+.. .|.
T Consensus 84 ~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~----------------~K~ 147 (209)
T d2b82a1 84 FSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKP----------------GQN 147 (209)
T ss_dssp GCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT----------------TCC
T ss_pred ccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCC----------------Cch
Confidence 34688999999999999997 899974 333444554 477742 23344443321 233
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcC
Q 025190 159 SMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~ 202 (256)
. -+..++++++ ++++||..+|+.+|+.+|+.++.+-+
T Consensus 148 ~---rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~iRi~r 184 (209)
T d2b82a1 148 T---KSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILR 184 (209)
T ss_dssp C---SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred H---HHHHHHHcCe----EEEecCCHHHHhHHHHcCCCceEeec
Confidence 2 2233356777 89999999999999999999998854
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.84 E-value=4.7e-09 Score=80.32 Aligned_cols=70 Identities=14% Similarity=0.072 Sum_probs=52.5
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCCCCCeeeCCcCchHHhHHHH
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVGEADYALENVNNLPQVVPEI 226 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~~~~~~~~~~~el~~~l~~~ 226 (256)
+..+.+-.|..++++++++ .++++|||+.||+.|.+.+|..... ..+..+..|.+.+++..|+.++|+.+
T Consensus 152 di~p~g~~Kg~al~~l~~~-----~~~i~~GDs~ND~~Mf~~~~~~~av-~~g~~~~~A~~~~~~~~ev~~~l~~l 221 (229)
T d1u02a_ 152 ELRVPGVNKGSAIRSVRGE-----RPAIIAGDDATDEAAFEANDDALTI-KVGEGETHAKFHVADYIEMRKILKFI 221 (229)
T ss_dssp EEECTTCCHHHHHHHHHTT-----SCEEEEESSHHHHHHHHTTTTSEEE-EESSSCCCCSEEESSHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHhcc-----ccceeecCCCChHHHHhccCCeEEE-EeCCCCccCeEEcCCHHHHHHHHHHH
Confidence 4444556677788777653 5799999999999999999876432 22334567899999999988888665
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.71 E-value=8.3e-09 Score=80.15 Aligned_cols=47 Identities=9% Similarity=0.063 Sum_probs=41.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEc
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVG 201 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~ 201 (256)
.+..|..+++++++.+|++++++++|||+.||++|.+.+|..+++-+
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~n 205 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRN 205 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTT
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCC
Confidence 35567799999999999999999999999999999999997666433
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.70 E-value=6.3e-09 Score=76.88 Aligned_cols=108 Identities=14% Similarity=0.103 Sum_probs=83.5
Q ss_pred HHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 025190 99 LCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLALHVANVDPR 175 (256)
Q Consensus 99 l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 175 (256)
+..|++.++ ++|+.....+....+.+++...+.. .+++...++.++++++++++
T Consensus 41 i~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~~~~-----------------------~~~K~~~l~~~~~~~~i~~~ 97 (177)
T d1k1ea_ 41 IKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG-----------------------KLEKETACFDLMKQAGVTAE 97 (177)
T ss_dssp HHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES-----------------------CSCHHHHHHHHHHHHTCCGG
T ss_pred HHHHhhhcEEEEEecCCchhHHHHHHhhhcccccccc-----------------------cccHHHHHHHHHHHhcCCcc
Confidence 556666665 8999999999999999887532221 46777889999999999999
Q ss_pred cEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCCcCc---hHHhHHHHHhc
Q 025190 176 HALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALENVNN---LPQVVPEIWVS 229 (256)
Q Consensus 176 ~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~~~e---l~~~l~~~~~~ 229 (256)
+|+||||+.||+++.+.+|+.++..+.. ..+..++++..+-.- +.++++.++..
T Consensus 98 ~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~ 155 (177)
T d1k1ea_ 98 QTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQA 155 (177)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHH
T ss_pred eeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHHHHHHH
Confidence 9999999999999999999887766533 345678999877542 56666665543
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.65 E-value=3.4e-08 Score=74.17 Aligned_cols=105 Identities=13% Similarity=0.063 Sum_probs=67.8
Q ss_pred CCCCCCChhHHHHHHhhhcCc-E---EEecCChH---HH---HHHHHhc-CcccccceeEecccCCcccccCCCCCCCCC
Q 025190 86 YDLIKPDPQLRNLLCSITQRK-I---IFTNSDRN---HA---ITCLKRL-EIADCFDQIICFETMNPNLSKATRPDEFPV 154 (256)
Q Consensus 86 ~~~~~~~pg~~~~l~~l~~~~-~---ivs~~~~~---~~---~~~l~~~-gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~ 154 (256)
+..++|+||+.++++.|++.+ . ++|..... .. ...|+++ +-......+++.
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~------------------ 131 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTR------------------ 131 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECS------------------
T ss_pred HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEcc------------------
Confidence 578899999999999998743 2 67775322 11 2234443 322222334432
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCCCCC----CCCeeeCCcCchHHhH
Q 025190 155 LLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTVNVG----EADYALENVNNLPQVV 223 (256)
Q Consensus 155 ~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~~~~----~~~~~~~~~~el~~~l 223 (256)
.|. .+.. -++|+|++..+..+..+|+.++....+.++. ..-..+.++.|+.+.|
T Consensus 132 -~K~------------~~~~--d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~~~~i 189 (195)
T d1q92a_ 132 -DKT------------VVSA--DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAI 189 (195)
T ss_dssp -CST------------TSCC--SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHH
T ss_pred -ccc------------eecC--eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHHHHHH
Confidence 121 1111 2899999999999999999999998766553 2346789998865443
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.57 E-value=1e-07 Score=66.93 Aligned_cols=100 Identities=14% Similarity=0.142 Sum_probs=71.5
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
++.|++.+.++.|++.|+ ++|+.....++.+.+.+|++. +++ .-.|+-...+
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~----v~~---------------------~~~p~~k~~~ 75 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL----VIA---------------------EVLPHQKSEE 75 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----EEC---------------------SCCHHHHHHH
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh----hcc---------------------ccchhHHHHH
Confidence 578999999999999997 999999999999999999853 332 1222334455
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCC-CCCCCCCeeeCC
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKT-VNVGEADYALEN 215 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~-~~~~~~~~~~~~ 215 (256)
.++++-. ..+.|+||+.||..+.+.+++..++.+.. ..+..+|+++.+
T Consensus 76 v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~ 124 (135)
T d2b8ea1 76 VKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIR 124 (135)
T ss_dssp HHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESS
T ss_pred HHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEEC
Confidence 5555543 57899999999999999999887654322 245678888754
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.54 E-value=1.2e-07 Score=72.70 Aligned_cols=49 Identities=4% Similarity=-0.229 Sum_probs=38.4
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCc----cccHHHHHcCCeEEEEcC
Q 025190 151 EFPVLLKPSMDAMKLALHVANVDPRHALFLDDNI----KNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 151 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~----~Di~~a~~~G~~~v~v~~ 202 (256)
+....+-.|..+++++++ .+.+++++|||+. ||++|.+.+|...+.|++
T Consensus 178 ei~~~~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n 230 (244)
T d2fuea1 178 DVFPEGWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 230 (244)
T ss_dssp EEEETTCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred eecchhccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence 445556677788888874 5889999999975 999999999976666643
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.47 E-value=2.4e-06 Score=71.05 Aligned_cols=116 Identities=17% Similarity=0.165 Sum_probs=78.4
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhc---------CcccccceeEecccCCcccccC---------
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRL---------EIADCFDQIICFETMNPNLSKA--------- 146 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~---------gl~~~f~~i~~~~~~~~~~~~~--------- 146 (256)
-+...|.+..+|++|++.|. ++||+.-..+...+..+ ...++||.|++... .+.-|..
T Consensus 183 Yv~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~-KP~FF~~~~~~~~v~~ 261 (458)
T d2bdea1 183 YVIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLAN-KPRFFYDNLRFLSVNP 261 (458)
T ss_dssp SEECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCC-HHHHHHSCCCEEEECT
T ss_pred hhcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCC-CCCccCCCCcceEEeC
Confidence 34567999999999999885 99999999998888763 34469999888542 1111111
Q ss_pred CCC--CCCCCCCCCC---HHHHHHHHHHcCCCCCcEEEEcCCc-cccHHHH-HcCCeEEEEcCCC
Q 025190 147 TRP--DEFPVLLKPS---MDAMKLALHVANVDPRHALFLDDNI-KNVTAGK-ALGLRTVLVGKTV 204 (256)
Q Consensus 147 ~~~--~~~~~~~Kp~---~~~~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~-~~G~~~v~v~~~~ 204 (256)
.++ .......|+. ..-...+.+.+|....+|+||||+. .||...+ ..|+.|++|-...
T Consensus 262 ~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL 326 (458)
T d2bdea1 262 ENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL 326 (458)
T ss_dssp TTCCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTH
T ss_pred CCCccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHHH
Confidence 000 0001111110 1225667777899888999999999 8977665 6799999996653
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.38 E-value=1.3e-07 Score=72.50 Aligned_cols=44 Identities=9% Similarity=-0.121 Sum_probs=32.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcC----CccccHHHHHcCCeEEEEcC
Q 025190 156 LKPSMDAMKLALHVANVDPRHALFLDD----NIKNVTAGKALGLRTVLVGK 202 (256)
Q Consensus 156 ~Kp~~~~~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~~~G~~~v~v~~ 202 (256)
+-.|..++++++ +++++++++||| |.||++|.+.+|...++++.
T Consensus 183 ~vsKg~al~~l~---~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 183 GWDKRYCLRHVE---NDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 230 (243)
T ss_dssp TCSGGGGGGGTT---TSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred ccCHHHHHHHHh---CCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence 444556666654 678899999999 66999999999966666644
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.99 E-value=1.3e-05 Score=58.00 Aligned_cols=133 Identities=10% Similarity=0.065 Sum_probs=80.9
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHHHHHHHhcCccccc----ceeEecccCCcccccC--CCCCCCCCCCCCCH
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHAITCLKRLEIADCF----DQIICFETMNPNLSKA--TRPDEFPVLLKPSM 160 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~~~~l~~~gl~~~f----~~i~~~~~~~~~~~~~--~~~~~~~~~~Kp~~ 160 (256)
+|.|++++.++.|++.|+ ++|+.....+..+.+.+|+...- +..+.+.......... ........+.+-.|
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p 99 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP 99 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCH
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccch
Confidence 678999999999999997 89999999999999999985321 1112211110000000 00000011123334
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCccccHHHHHcCCeEEEEcCCC--CCCCCCeeeCC--cCchHHhH
Q 025190 161 DAMKLALHVANVDPRHALFLDDNIKNVTAGKALGLRTVLVGKTV--NVGEADYALEN--VNNLPQVV 223 (256)
Q Consensus 161 ~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~v~v~~~~--~~~~~~~~~~~--~~el~~~l 223 (256)
+--..+.+.++-....+.++||+.||..+.+.+.++...- .+. .+..+|+++.+ +..+...|
T Consensus 100 ~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I 165 (168)
T d1wpga2 100 SHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAV 165 (168)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHH
T ss_pred hHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHH
Confidence 4444444544444467999999999999999999777653 332 23458888665 44444444
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.87 E-value=2.9e-05 Score=52.90 Aligned_cols=46 Identities=17% Similarity=0.221 Sum_probs=36.0
Q ss_pred CCCCChhHHHHHHhhhcCcE---EEecCC---------------hHHHHHHHHhcCcccccceeEe
Q 025190 88 LIKPDPQLRNLLCSITQRKI---IFTNSD---------------RNHAITCLKRLEIADCFDQIIC 135 (256)
Q Consensus 88 ~~~~~pg~~~~l~~l~~~~~---ivs~~~---------------~~~~~~~l~~~gl~~~f~~i~~ 135 (256)
...|.+++.+.++.|++.|. +.|++. .+.....|+..|+. +|.++.
T Consensus 22 ~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~--Yd~Li~ 85 (124)
T d1xpja_ 22 NVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP--YDEILV 85 (124)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC--CSEEEE
T ss_pred ccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC--ceEEEE
Confidence 34789999999999999986 777763 24567788899984 688776
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.44 E-value=0.0019 Score=48.41 Aligned_cols=140 Identities=12% Similarity=0.092 Sum_probs=83.1
Q ss_pred CCChhhHhhhhhcCCCCCCCCCChhHHHHHHhhhcCc--EEEecCChHHHHHHHHhcCcccccceeEeccc-CC---c--
Q 025190 70 DIGADDYHGFVHGRLPYDLIKPDPQLRNLLCSITQRK--IIFTNSDRNHAITCLKRLEIADCFDQIICFET-MN---P-- 141 (256)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~l~~l~~~~--~ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~-~~---~-- 141 (256)
..+.+++.+.- ..++.+.||+.+.|+.+++.- +|+|.+...+++.+.+++|+. +. .++.+- .. .
T Consensus 66 Gvt~edL~~fS-----E~~~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~~gfp--~e-~~~T~~~lD~~~~p~ 137 (308)
T d1y8aa1 66 GVKNRDVERIA-----ELSAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGVR--GE-LHGTEVDFDSIAVPE 137 (308)
T ss_dssp TCCHHHHHHHH-----HHHCCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC--SE-EEEEBCCGGGCCCCH
T ss_pred CCCHHHHHHHh-----hhceeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhhcCCC--ce-eecccccccccCCCh
Confidence 34666666554 246789999999999999864 499999999999999999874 22 221111 00 0
Q ss_pred -------------------c-------cccC----CCC-CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCccccHHH
Q 025190 142 -------------------N-------LSKA----TRP-DEFPVLLKPSMDAMKLALHVANVDPRHALFLDDNIKNVTAG 190 (256)
Q Consensus 142 -------------------~-------~~~~----~~~-~~~~~~~Kp~~~~~~~~~~~~~~~~~~~i~vGDs~~Di~~a 190 (256)
. +|.+ .-+ +...+-+-.+..+.+.++...++++. ++||||.+|+++.
T Consensus 138 ee~e~ll~i~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~--~~VGDSITDve~L 215 (308)
T d1y8aa1 138 GLREELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFP--VVVGDSISDYKMF 215 (308)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSC--EEEECSGGGHHHH
T ss_pred HHHHHHHHHhhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcc--eeccCccccHHHH
Confidence 0 0000 000 00001112244556667777888764 9999999998887
Q ss_pred HHc----CCeEEEEcCCCCCCCCCeeeCCcCch
Q 025190 191 KAL----GLRTVLVGKTVNVGEADYALENVNNL 219 (256)
Q Consensus 191 ~~~----G~~~v~v~~~~~~~~~~~~~~~~~el 219 (256)
+.+ |+...+.++...-..|+..+-+.+..
T Consensus 216 r~~r~~gGlaIsFNGN~Yal~eA~VaiiS~~~~ 248 (308)
T d1y8aa1 216 EAARGLGGVAIAFNGNEYALKHADVVIISPTAM 248 (308)
T ss_dssp HHHHHTTCEEEEESCCHHHHTTCSEEEECSSTH
T ss_pred HHHhcCCCeeEEecCccccccccceEEeccchh
Confidence 665 43333333333234456665555543
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.65 E-value=0.0014 Score=44.18 Aligned_cols=42 Identities=14% Similarity=0.128 Sum_probs=29.9
Q ss_pred CCChhHHHHHHhhhcCcE---EEecCChHHH---HHHHHhcCccccccee
Q 025190 90 KPDPQLRNLLCSITQRKI---IFTNSDRNHA---ITCLKRLEIADCFDQI 133 (256)
Q Consensus 90 ~~~pg~~~~l~~l~~~~~---ivs~~~~~~~---~~~l~~~gl~~~f~~i 133 (256)
+|.|++.++|+.|++.|. +.|++..... ...|+..|+. |+.+
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~--yd~i 68 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE--FYAA 68 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC--CSEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC--ceeh
Confidence 588999999999999885 7777755443 4456666654 4544
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.06 E-value=0.0048 Score=44.57 Aligned_cols=92 Identities=16% Similarity=0.110 Sum_probs=66.5
Q ss_pred CCCChhHHHHHHhhhcCc-E-EEecCChHHHHHHHHhcCcccccceeEecccCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 025190 89 IKPDPQLRNLLCSITQRK-I-IFTNSDRNHAITCLKRLEIADCFDQIICFETMNPNLSKATRPDEFPVLLKPSMDAMKLA 166 (256)
Q Consensus 89 ~~~~pg~~~~l~~l~~~~-~-ivs~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~ 166 (256)
+...||+.+||+.+.+.. + |-|.+....++.+++.+.....+...+..+.+... +. .+.+-
T Consensus 54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~--------------~~---~~~Kd 116 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH--------------RG---NYVKD 116 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEE--------------TT---EEECC
T ss_pred EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeec--------------CC---ccccc
Confidence 467899999999999874 3 99999999999999999887777776666554321 11 01223
Q ss_pred HHHcCCCCCcEEEEcCCccccHHHHHcCCeE
Q 025190 167 LHVANVDPRHALFLDDNIKNVTAGKALGLRT 197 (256)
Q Consensus 167 ~~~~~~~~~~~i~vGDs~~Di~~a~~~G~~~ 197 (256)
++.+|-+.+++++|+|+..-...-...|+..
T Consensus 117 L~~l~~~l~~vvivDd~~~~~~~~~~N~I~I 147 (181)
T d1ta0a_ 117 LSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp GGGSCSCGGGEEEECSCGGGGTTCGGGBCCC
T ss_pred HhhcCCCHHHeEEEcCChhhhhcCccCeeEe
Confidence 4566778899999999997655434445543
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=92.62 E-value=0.021 Score=40.89 Aligned_cols=18 Identities=17% Similarity=0.331 Sum_probs=15.5
Q ss_pred CCCeEEEEecCCCccCCC
Q 025190 3 SPFNCLVFDLDDTLYPSE 20 (256)
Q Consensus 3 ~~~k~viFD~DGTL~d~~ 20 (256)
..+|+++||+||||+|..
T Consensus 3 ~~ik~~i~DvDGVlTDG~ 20 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDGQ 20 (177)
T ss_dssp GGCCEEEEECTTTTSCSE
T ss_pred ccCeEEEEccCCcccCCe
Confidence 468999999999999864
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=87.47 E-value=0.095 Score=42.08 Aligned_cols=20 Identities=20% Similarity=0.454 Sum_probs=16.3
Q ss_pred CeEEEEecCCCccCCCccHH
Q 025190 5 FNCLVFDLDDTLYPSETGIA 24 (256)
Q Consensus 5 ~k~viFD~DGTL~d~~~~~~ 24 (256)
+|.|+||+||||++....+.
T Consensus 1 ~~~i~fd~dGVll~~~~~~D 20 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFD 20 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHH
T ss_pred CceEEEeCCcEEEcceeecc
Confidence 37899999999999875443
|