Citrus Sinensis ID: 025290

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
Protein Sequence
MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGRKNVWDIPEVII
Secondary Structure (PSIPRED)
cccccEEEEEccccccHHHHHHHHHHHHHcccccccccccEEEEcccccccccHHHHHHHHHccccccccccEEEEcccHHHHHHHHHcccccccccccccccHHHHccHHHHccccccccccHHHHccccccccHHHEcccccccccccccccccccccccccccccHHHHHcccHHHHHHHHHccccEEcccEEEEcccccccccEEEEEEcccccccHHHHHHHHHHccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEcccccHHHHHHHHHHHHHHHccccccccEEEEEccccccccccHHHHHHHHHccccccccEEEEEcccHHHHHHHHHHcccccccccccHHHHHHHccccHccccccccccccccccccccccEEEEEEcccccccccccccccccHHHHcccccccHHHHHHccHHHHHHHHccccEEccccEEEEcccccEccEEEEEEccccccccHHHHHHHHHHccccccccHHHcccccccccccEcc
Coil and Loop (DISEMBL)
msrprrvccigdVHGYISKLQNLWKNLethigpsdfnSAIIIFLGdycdrgpntREVIDFLIslptkypnqkhvflsgnhdlgFAAFvgvlpepggglgfkegWKQYEQNeeregwfkgdgyekmhlqgrrwggkiTVKFnaakgteykgsiydaaptfesygvahgsadlvkavpDHHKKFLADMLWVheedevcvetndgikhCKLIAVHAGLERGKKVGEQLELLkakdtrvpkvealsgrknvwdipevii
Flexible Loop (DISEMBL)
msrprrvccigdVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHlqgrrwggkiTVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLellkakdtrvpkvealsgrknvwdipevii
Low Complexity Region (SEG)
MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAfvgvlpepggglgfKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGRKNVWDIPEVII
Disordered region (IsUnstruct)
*****RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAK***V**VEALSGRKNVWDI*****
Disordered Region (DISOPRED)
*SRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGRKNVWDIPEVII
Disordered Region (DISEMBL)
MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGRKNVWDIPEVII
Disordered Region (DISPRO)
**RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGRKNVWDIPEVII
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGRKNVWDIPEVII
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	255	2.2.26 [Sep-21-2011]
P48487	316	Serine/threonine-protein	N/A	no	0.290	0.234	0.385	2e-05
P23880	322	Serine/threonine-protein	yes	no	0.290	0.229	0.385	4e-05
Q60EX6	883	Serine/threonine-protein	no	no	0.290	0.083	0.333	7e-05
Q8L7U5	881	Serine/threonine-protein	no	no	0.290	0.083	0.333	7e-05
Q2QM47	1009	Serine/threonine-protein	no	no	0.388	0.098	0.313	8e-05
Q9LR78	793	Serine/threonine-protein	no	no	0.396	0.127	0.324	8e-05
P48490	314	Serine/threonine-protein	N/A	no	0.282	0.229	0.382	8e-05
P23636	322	Major serine/threonine-pr	no	no	0.270	0.214	0.371	9e-05
P48577	307	Serine/threonine-protein	N/A	no	0.270	0.224	0.371	9e-05
Q09496	331	Putative serine/threonine	no	no	0.282	0.217	0.382	9e-05

>sp|P48487|PP1_BRAOL Serine/threonine-protein phosphatase PP1 OS=Brassica oleracea GN=PP1 PE=2 SV=1

 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 9/83 (10%)

Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P ++C  GD+HG  S L  L+   E    P D N    +FLGDY DRG  + E I F
Sbjct: 70  LEAPIKIC--GDIHGQYSDLLRLF---EYGGFPPDAN---YLFLGDYVDRGKQSLETICF 121

Query: 61  LISLPTKYPNQKHVFLSGNHDLG 83
           L++   KYP +    L GNH+  
Sbjct: 122 LLAYKIKYP-ENFFLLRGNHECA 143

Brassica oleracea (taxid: 3712)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6

>sp|P23880|PP12_SCHPO Serine/threonine-protein phosphatase PP1-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sds21 PE=3 SV=1

 Score = 48.5 bits (114), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 9/83 (10%)

Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P ++C  GD+HG  S L  L+   E    P D N    +FLGDY DRG  + EVI  
Sbjct: 51  LEAPLKIC--GDIHGQYSDLLRLF---EYGGYPPDAN---YLFLGDYVDRGKQSLEVICL 102

Query: 61  LISLPTKYPNQKHVFLSGNHDLG 83
           L +   KYP +    L GNH+  
Sbjct: 103 LFAYKIKYP-ENFFLLRGNHEFA 124

Essential role in cell cycle control. PP1 is perhaps required for exit from mitosis.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q60EX6|BSL1_ORYSJ Serine/threonine-protein phosphatase BSL1 homolog OS=Oryza sativa subsp. japonica GN=BSL1 PE=2 SV=1

 Score = 47.8 bits (112), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 7   VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPT 66
           +   GD+HG    L  L+          D      +FLGDY DRG ++ E I  L++L  
Sbjct: 581 IKVFGDLHGQFGDLMRLFDEYGYPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKI 640

Query: 67  KYPNQKHVFLSGNHD 81
           +YP   H  + GNH+
Sbjct: 641 EYPENVH-LIRGNHE 654

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q8L7U5|BSL1_ARATH Serine/threonine-protein phosphatase BSL1 OS=Arabidopsis thaliana GN=BSL1 PE=1 SV=2

 Score = 47.8 bits (112), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 7   VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPT 66
           +   GD+HG    L  L+          D      +FLGDY DRG ++ E I  L++L  
Sbjct: 579 IKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKI 638

Query: 67  KYPNQKHVFLSGNHD 81
           +YP   H+ + GNH+
Sbjct: 639 EYPENVHL-IRGNHE 652

Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q2QM47|BSL2_ORYSJ Serine/threonine-protein phosphatase BSL2 homolog OS=Oryza sativa subsp. japonica GN=BSL2 PE=2 SV=2

 Score = 47.8 bits (112), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 3/102 (2%)

Query: 11  GDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPN 70
           GD+HG    L  L+          D      +FLGDY DRG ++ E I  L++L  +YP 
Sbjct: 710 GDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPL 769

Query: 71  QKHVFLSGNHDLG-FAAFVGVLPEPGGGLGFKEG-WKQYEQN 110
             H+ + GNH+     A  G   E    +G ++G W  +  N
Sbjct: 770 NVHL-IRGNHEAADINALFGFRIECIERMGERDGIWTWHRMN 810

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q9LR78|BSU1_ARATH Serine/threonine-protein phosphatase BSU1 OS=Arabidopsis thaliana GN=BSU1 PE=2 SV=2

 Score = 47.8 bits (112), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 7/108 (6%)

Query: 7   VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPT 66
           +   GD+HG    L  L+          D      +FLGDY DRG ++ E+I  L +L  
Sbjct: 505 IKVFGDIHGQYGDLMRLFHEYGHPSVEGDITHIDYLFLGDYVDRGQHSLEIIMLLFALKI 564

Query: 67  KYPNQKHVFLSGNHD-LGFAAFVGVLPE----PGGGLGFKEGWKQYEQ 109
           +YP   H+ + GNH+ L      G L E     G   GF E W +  Q
Sbjct: 565 EYPKNIHL-IRGNHESLAMNRIYGFLTECEERMGESYGF-EAWLKINQ 610

Phosphatase that acts as a positive regulator of brassinolide signaling. Dephosphorylates BES1, a transcription factor that regulates the expression of brassinolide-response genes, thereby playing an important role in the regulation of response to brassinosteroids.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|P48490|PP1_PHAVU Serine/threonine-protein phosphatase PP1 OS=Phaseolus vulgaris PE=2 SV=1

 Score = 47.8 bits (112), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 9/81 (11%)

Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P RVC  GD+HG   + Q+L +  E    P    +A  +FLGDY DRG  + E I  
Sbjct: 49  LRAPMRVC--GDIHG---QYQDLLRLFEYGGYPP---AANYLFLGDYVDRGKQSLETICL 100

Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L++   +YP+ K   L GNH+
Sbjct: 101 LLAYKIRYPD-KIFLLRGNHE 120

Phaseolus vulgaris (taxid: 3885)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|P23636|PP2A2_SCHPO Major serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppa2 PE=3 SV=1

 Score = 47.4 bits (111), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 9/78 (11%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GD+HG    L  L+K     IG  D      +F+GDY DRG ++ E +  L++
Sbjct: 64  PVTVC--GDIHGQFHDLMELFK-----IG-GDVPDMNYLFMGDYVDRGYHSVETVSLLVA 115

Query: 64  LPTKYPNQKHVFLSGNHD 81
           +  +YPN+  + L GNH+
Sbjct: 116 MKLRYPNRITI-LRGNHE 132

Essential role in cell cycle control. PP2A may be involved in controlling the entry into mitosis, possibly acting as an inhibitor.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|P48577|PP2A_ACECL Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Acetabularia cliftonii PE=2 SV=1

 Score = 47.4 bits (111), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 9/78 (11%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GD+HG    +  L+K     IG +  ++  + F+GDY DRG N+ E +  L+S
Sbjct: 48  PVTVC--GDIHGQFHDMVELFK-----IGGTCPDTNYL-FMGDYVDRGYNSVETVTLLVS 99

Query: 64  LPTKYPNQKHVFLSGNHD 81
           L  +YP ++   L GNH+
Sbjct: 100 LKVRYP-ERITILRGNHE 116

Acetabularia cliftonii (taxid: 35862)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q09496|PPH6_CAEEL Putative serine/threonine-protein phosphatase pph-6 OS=Caenorhabditis elegans GN=pph-6 PE=3 SV=2

 Score = 47.4 bits (111), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 9/81 (11%)

Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +S P  +C  GD+HG    L  L+K      G +  N+  + F+GDY DRG  + E +  
Sbjct: 70  VSSPVTIC--GDIHGQFYDLLELFKT-----GGTVPNTKYV-FMGDYVDRGHYSLETVTL 121

Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L  L  KYPNQ    L GNH+
Sbjct: 122 LFCLLLKYPNQI-TLLRGNHE 141

Caenorhabditis elegans (taxid: 6239)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
449440213	315	PREDICTED: uncharacterized protein LOC10	0.984	0.796	0.760	1e-114
224067860	319	predicted protein [Populus trichocarpa]	0.988	0.789	0.742	1e-114
255587044	324	hydrolase, putative [Ricinus communis] g	0.992	0.780	0.738	1e-113
225440958	321	PREDICTED: uncharacterized protein LOC10	0.980	0.778	0.764	1e-112
147805412	321	hypothetical protein VITISV_043402 [Viti	0.980	0.778	0.764	1e-112
351721901	311	calcineurin-like phosphoesterase [Glycin	0.988	0.810	0.749	1e-111
168988217	311	calcineurin-like phosphoesterase [Cucumi	0.968	0.794	0.745	1e-110
350536791	315	ACI14 protein [Solanum lycopersicum] gi|	0.984	0.796	0.705	1e-107
18398699	309	calcineurin-like metallo-phosphoesterase	0.980	0.809	0.676	1e-104
224067858	319	predicted protein [Populus trichocarpa]	0.988	0.789	0.730	1e-103

>gi|449440213|ref|XP_004137879.1| PREDICTED: uncharacterized protein LOC101210827 [Cucumis sativus] gi|449500956|ref|XP_004161238.1| PREDICTED: uncharacterized LOC101210827 [Cucumis sativus]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 191/251 (76%), Positives = 219/251 (87%)

Query: 2   SRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
           ++ R VCCIGDVHGYI+KLQNLW NLE+ I PSDFNSA+IIFLGDYCDRG NTREVIDFL
Sbjct: 9   AKTRVVCCIGDVHGYITKLQNLWSNLESSIHPSDFNSALIIFLGDYCDRGSNTREVIDFL 68

Query: 62  ISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDG 121
           ++LP+KYPNQKHVFL+GNHD  FAAF+G+LP P  G  F + W Q+E +EEREGWF+G+G
Sbjct: 69  VNLPSKYPNQKHVFLAGNHDFAFAAFLGILPPPADGSPFSDTWTQFEASEEREGWFRGEG 128

Query: 122 YEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKK 181
           YE MH+QGRRW GKITVK N AKGT+Y+GSIYDA PTFESYGV HGSADLVKAVPD HKK
Sbjct: 129 YENMHVQGRRWAGKITVKTNLAKGTDYQGSIYDAGPTFESYGVPHGSADLVKAVPDEHKK 188

Query: 182 FLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEAL 241
           FL++M WVHEED+VC++T DGIKH KLIAVHAGLERGK V EQL  LKAKDT+VPK+E L
Sbjct: 189 FLSNMAWVHEEDDVCLDTEDGIKHYKLIAVHAGLERGKDVQEQLNSLKAKDTKVPKIECL 248

Query: 242 SGRKNVWDIPE 252
           SGR+NVWDIP+
Sbjct: 249 SGRRNVWDIPK 259

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067860|ref|XP_002302569.1| predicted protein [Populus trichocarpa] gi|222844295|gb|EEE81842.1| predicted protein [Populus trichocarpa]

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 187/252 (74%), Positives = 217/252 (86%)

Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +++PR V CIGD+HGYI+KLQNLW NLET   P  FN+A IIFLGDYCDRGP+T++V+DF
Sbjct: 12  LAKPRLVICIGDIHGYITKLQNLWSNLETQFDPQHFNAATIIFLGDYCDRGPDTKKVLDF 71

Query: 61  LISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGD 120
           LI LP++YPNQKHVFLSGNHD  FAAFVGVLPEP  G+ FKEGWK+YE++E+REGW+KGD
Sbjct: 72  LIDLPSRYPNQKHVFLSGNHDFAFAAFVGVLPEPQNGVSFKEGWKEYEESEDREGWYKGD 131

Query: 121 GYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHK 180
           GYE MHLQGRRW G I V+FN +KG EYKGSIYDA PTF SYGV HGS+DL+KAVPD HK
Sbjct: 132 GYENMHLQGRRWAGHIKVRFNTSKGIEYKGSIYDAGPTFTSYGVPHGSSDLLKAVPDDHK 191

Query: 181 KFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEA 240
           KFLAD +WVHEED+VC+E  +GI+HCKLIA HAGLE GK VGEQL  LKAK+T VPK+EA
Sbjct: 192 KFLADTVWVHEEDDVCIEDEEGIRHCKLIAAHAGLEEGKNVGEQLRFLKAKETHVPKIEA 251

Query: 241 LSGRKNVWDIPE 252
           LSGRK VWDIP+
Sbjct: 252 LSGRKTVWDIPK 263

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587044|ref|XP_002534112.1| hydrolase, putative [Ricinus communis] gi|223525835|gb|EEF28272.1| hydrolase, putative [Ricinus communis]

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 189/256 (73%), Positives = 219/256 (85%), Gaps = 3/256 (1%)

Query: 3   RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLI 62
           +PR V CIGD+HGY SKLQ LW NLE  + P DFNSA++IFLGDYCDRGP+T++V+DFLI
Sbjct: 16  KPRVVICIGDIHGYFSKLQKLWSNLEAIVNPQDFNSALVIFLGDYCDRGPDTKKVLDFLI 75

Query: 63  SLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGY 122
            LP+ YPNQKHVFLSGNHDL FAAF+G+LPEPG G+ F+EGWK+YE NEEREGW+KG GY
Sbjct: 76  KLPSFYPNQKHVFLSGNHDLAFAAFLGLLPEPGNGMLFQEGWKEYELNEEREGWYKGVGY 135

Query: 123 EKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKF 182
           E M+LQGRRW G I VKFN AKGTEYKGSIYDA PTFESYGV HGSADL+K VPD HKKF
Sbjct: 136 ENMYLQGRRWAGNIKVKFNVAKGTEYKGSIYDAGPTFESYGVPHGSADLIKVVPDEHKKF 195

Query: 183 LADMLWVHEE---DEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVE 239
           L DM+W+HEE   ++VC+E  +G+KHCKLIAVHAGLE+GK V EQL  LK KDTRVPK+E
Sbjct: 196 LVDMVWIHEEARLEDVCIENEEGMKHCKLIAVHAGLEKGKNVEEQLAFLKVKDTRVPKIE 255

Query: 240 ALSGRKNVWDIPEVII 255
           ALSGRKNVWDIP+ ++
Sbjct: 256 ALSGRKNVWDIPKELV 271

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440958|ref|XP_002283250.1| PREDICTED: uncharacterized protein LOC100261391 [Vitis vinifera]

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/250 (76%), Positives = 212/250 (84%)

Query: 3   RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLI 62
           +PR VCCIGD+HG+I+KLQNLW NLET I P DF +A+IIFLGDYCDRGP+TREVIDFLI
Sbjct: 16  KPRLVCCIGDIHGFITKLQNLWSNLETLIDPVDFQTALIIFLGDYCDRGPDTREVIDFLI 75

Query: 63  SLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGY 122
           SL + YPNQ HVFLSGNHD  FAAFVGVLP P  G  F E WK+Y  +EEREGWFKGDGY
Sbjct: 76  SLRSNYPNQSHVFLSGNHDFAFAAFVGVLPPPPDGSEFSETWKEYTSSEEREGWFKGDGY 135

Query: 123 EKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKF 182
           E MHLQGRRW G I VKFN  KGTEY+GSIYDA  TFESYGV HGSADLVKAVPD HKKF
Sbjct: 136 ENMHLQGRRWAGTIKVKFNVTKGTEYQGSIYDARLTFESYGVPHGSADLVKAVPDEHKKF 195

Query: 183 LADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALS 242
           LADM+WVHEED+VC++T +GIKHCKLIAVHAGLER + V EQL+ LKAKDTRVPKV  LS
Sbjct: 196 LADMVWVHEEDDVCIQTEEGIKHCKLIAVHAGLERDEAVDEQLKTLKAKDTRVPKVGPLS 255

Query: 243 GRKNVWDIPE 252
           GR +VW+IP+
Sbjct: 256 GRASVWEIPK 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147805412|emb|CAN63087.1| hypothetical protein VITISV_043402 [Vitis vinifera]

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/250 (76%), Positives = 212/250 (84%)

Query: 3   RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLI 62
           +PR VCCIGD+HG+I+KLQNLW NLET I P DF +A+IIFLGDYCDRGP+TREVIDFLI
Sbjct: 16  KPRLVCCIGDIHGFITKLQNLWSNLETLIDPVDFQTALIIFLGDYCDRGPDTREVIDFLI 75

Query: 63  SLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGY 122
           SL + YPNQ HVFLSGNHD  FAAFVGVLP P  G  F E WK+Y  +EEREGWFKGDGY
Sbjct: 76  SLRSNYPNQSHVFLSGNHDFAFAAFVGVLPPPPDGSEFSETWKEYTSSEEREGWFKGDGY 135

Query: 123 EKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKF 182
           E MHLQGRRW G I VKFN  KGTEY+GSIYDA  TFESYGV HGSADLVKAVPD HKKF
Sbjct: 136 ENMHLQGRRWAGTIKVKFNVTKGTEYQGSIYDARLTFESYGVPHGSADLVKAVPDEHKKF 195

Query: 183 LADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALS 242
           LADM+WVHEED+VC++T +GIKHCKLIAVHAGLER + V EQL+ LKAKDTRVPKV  LS
Sbjct: 196 LADMVWVHEEDDVCIQTEEGIKHCKLIAVHAGLERDEAVDEQLKXLKAKDTRVPKVGPLS 255

Query: 243 GRKNVWDIPE 252
           GR +VW+IP+
Sbjct: 256 GRASVWEIPK 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721901|ref|NP_001237737.1| calcineurin-like phosphoesterase [Glycine max] gi|223452552|gb|ACM89603.1| calcineurin-like phosphoesterase [Glycine max]

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/255 (74%), Positives = 219/255 (85%), Gaps = 3/255 (1%)

Query: 1   MSRP---RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREV 57
           MS P   R V C+GD+HG+I+KLQ+LWKNLE  +  S+F +A +IFLGDYCDRGP TR+V
Sbjct: 1   MSEPPKTRAVICVGDIHGFITKLQSLWKNLEGSLDRSEFETATLIFLGDYCDRGPATRQV 60

Query: 58  IDFLISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWF 117
           IDFLISLP++YP QKHVFL GNHDL FAAF+ +LP P  G GF EGW++YE +EEREGWF
Sbjct: 61  IDFLISLPSRYPRQKHVFLCGNHDLAFAAFLRLLPAPADGCGFSEGWREYEASEEREGWF 120

Query: 118 KGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPD 177
           KG+GYE MHLQGRRW GKI VKFN  KGTEY+GSIYDA PTFESYGV HGSADLVKAVPD
Sbjct: 121 KGEGYEDMHLQGRRWSGKIKVKFNTVKGTEYQGSIYDAGPTFESYGVPHGSADLVKAVPD 180

Query: 178 HHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPK 237
            HKKFLAD++WVHEED+V V T+DG+K CKLIAVHAGLE+GK V EQL+LLKA+DTRVPK
Sbjct: 181 DHKKFLADLVWVHEEDDVFVNTDDGVKCCKLIAVHAGLEKGKDVKEQLKLLKARDTRVPK 240

Query: 238 VEALSGRKNVWDIPE 252
           VEALSGRK+VWDIPE
Sbjct: 241 VEALSGRKSVWDIPE 255

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168988217|gb|ACA35284.1| calcineurin-like phosphoesterase [Cucumis sativus]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/251 (74%), Positives = 215/251 (85%), Gaps = 4/251 (1%)

Query: 2   SRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
           ++ R VCCIGDVHGYI+KLQNLW NLE+ I PSDFNSA+IIFLGDYCDRG NTREVIDFL
Sbjct: 9   AKTRVVCCIGDVHGYITKLQNLWSNLESSIHPSDFNSALIIFLGDYCDRGSNTREVIDFL 68

Query: 62  ISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDG 121
           ++LP+KYPNQKHVFL+GNHD  FAAF+G+LP P  G  F + W Q+E +EEREGWF+G+G
Sbjct: 69  VNLPSKYPNQKHVFLAGNHDFAFAAFLGILPPPADGSPFSDTWTQFEASEEREGWFRGEG 128

Query: 122 YEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKK 181
           YE MH+QGRRW GKITVK N AKGT+Y+GSIYDA PTFESYGV HGSADLVKAVPD HKK
Sbjct: 129 YENMHVQGRRWAGKITVKTNLAKGTDYQGSIYDAGPTFESYGVPHGSADLVKAVPDEHKK 188

Query: 182 FLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEAL 241
           FL++M W    D+VC++T DGIKH KLIAVHAGLERGK V EQL  LKAKDT+VPK+E L
Sbjct: 189 FLSNMAW----DDVCLDTEDGIKHYKLIAVHAGLERGKDVQEQLNSLKAKDTKVPKIECL 244

Query: 242 SGRKNVWDIPE 252
           SGR+NVWDIP+
Sbjct: 245 SGRRNVWDIPK 255

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350536791|ref|NP_001234777.1| ACI14 protein [Solanum lycopersicum] gi|68449770|gb|AAY97872.1| ACI14 [Solanum lycopersicum]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 177/251 (70%), Positives = 211/251 (84%)

Query: 2   SRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
           ++PR VCCIGD+HGYI+KLQNLW NLE+ + PSDF +A+IIFLGDYCDRGP T +V+DFL
Sbjct: 9   TKPRVVCCIGDIHGYITKLQNLWSNLESCVNPSDFETALIIFLGDYCDRGPETSKVVDFL 68

Query: 62  ISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDG 121
           ISLP+KYP Q HVFL GNHD  F AF+GVLP P  G  F E WK+YE NEEREGW+KG+ 
Sbjct: 69  ISLPSKYPKQSHVFLCGNHDFAFGAFLGVLPSPPDGSEFCETWKEYEMNEEREGWYKGES 128

Query: 122 YEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKK 181
           +E MHLQGRRW G  TVKFNA +G +YKGSIYDAAPTF+SYGV HGSADL+KAVPD HKK
Sbjct: 129 FENMHLQGRRWAGNHTVKFNAVRGIDYKGSIYDAAPTFQSYGVPHGSADLMKAVPDEHKK 188

Query: 182 FLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEAL 241
           FLA+++W+HEED+V ++T  GIK CKLIAVHAGLE+ K V +Q+  LKAKDTR+PKV AL
Sbjct: 189 FLANLVWIHEEDDVTIKTEKGIKRCKLIAVHAGLEKNKSVEQQINTLKAKDTRIPKVAAL 248

Query: 242 SGRKNVWDIPE 252
           SGRK+VW+IP+
Sbjct: 249 SGRKDVWEIPQ 259

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18398699|ref|NP_566364.1| calcineurin-like metallo-phosphoesterase-like protein [Arabidopsis thaliana] gi|6143879|gb|AAF04426.1|AC010927_19 unknown protein [Arabidopsis thaliana] gi|23297516|gb|AAN12986.1| unknown protein [Arabidopsis thaliana] gi|332641321|gb|AEE74842.1| calcineurin-like metallo-phosphoesterase-like protein [Arabidopsis thaliana]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 169/250 (67%), Positives = 208/250 (83%)

Query: 3   RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLI 62
           +PR V C+GD+HGYISKL NLW NL++ I PSDF+SA++IFLGDYCDRGP TR+VIDFLI
Sbjct: 4   KPRTVICVGDIHGYISKLNNLWLNLQSAIDPSDFSSALVIFLGDYCDRGPETRKVIDFLI 63

Query: 63  SLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGY 122
           SLP K+P+Q HVFL+GNHD  F+ F+G+LP P  G   K+ WK+Y ++EE EGW+ G+G+
Sbjct: 64  SLPEKHPDQTHVFLAGNHDFAFSGFLGLLPRPSDGSDLKDTWKEYSKSEETEGWYTGEGF 123

Query: 123 EKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKF 182
           E MHLQGRRW GKI   FN+ KG  YKGSIYDA  TFESYGV HGS+DL+KAVP+ HKKF
Sbjct: 124 EDMHLQGRRWAGKIKATFNSVKGMAYKGSIYDAGSTFESYGVPHGSSDLMKAVPESHKKF 183

Query: 183 LADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALS 242
           L +M+WVHEED+VC+ET +G+KHCKLIAVHAGLE+G  V EQL+LL+AKDT + K++ LS
Sbjct: 184 LTNMVWVHEEDDVCIETEEGLKHCKLIAVHAGLEKGNNVEEQLKLLRAKDTSISKIQHLS 243

Query: 243 GRKNVWDIPE 252
           GRKNVWDIP+
Sbjct: 244 GRKNVWDIPQ 253

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067858|ref|XP_002302568.1| predicted protein [Populus trichocarpa] gi|222844294|gb|EEE81841.1| predicted protein [Populus trichocarpa]

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 184/252 (73%), Positives = 215/252 (85%)

Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +++PR V CIGD+HG+I+KLQNLW NLET   P  FN+A IIFLGDYCDRGP+T++V+DF
Sbjct: 12  VAKPRLVICIGDIHGHITKLQNLWSNLETQFDPQHFNAATIIFLGDYCDRGPDTKKVLDF 71

Query: 61  LISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGD 120
           LI LP++YPNQKHVFLSGNHD  FAAFVGVLPEP  G+ FKEGW++YE++E+REGW+KGD
Sbjct: 72  LIDLPSRYPNQKHVFLSGNHDFAFAAFVGVLPEPQNGVSFKEGWEEYEESEDREGWYKGD 131

Query: 121 GYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHK 180
           GYE MHL+GRRW G I V FN  KGTE KGSIYDA PTF SYGV HGS+DL+KAVPD HK
Sbjct: 132 GYENMHLEGRRWAGHIKVGFNTIKGTECKGSIYDAGPTFASYGVPHGSSDLLKAVPDDHK 191

Query: 181 KFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEA 240
           KFLAD +WVHEED+VC+E  +GI+HCKLIA HAGLE GK VGEQL  LKAK+T VPK+EA
Sbjct: 192 KFLADTVWVHEEDDVCIEDEEGIRHCKLIAAHAGLEEGKNVGEQLRFLKAKETHVPKIEA 251

Query: 241 LSGRKNVWDIPE 252
           LSGRK VWDIP+
Sbjct: 252 LSGRKTVWDIPK 263

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
TAIR|locus:2100098	309	AT3G09970 "AT3G09970" [Arabido	0.980	0.809	0.652	1.8e-94
TAIR|locus:2100113	311	AT3G09960 "AT3G09960" [Arabido	0.980	0.803	0.621	3.2e-88
TIGR_CMR|SPO_3358	244	SPO_3358 "serine/threonine pro	0.298	0.311	0.380	7.9e-10
TIGR_CMR|CBU_0488	235	CBU_0488 "serine/threonine pro	0.290	0.314	0.421	9.9e-08
UNIPROTKB|C9J9S3	125	PPP1CB "Serine/threonine-prote	0.278	0.568	0.353	2.7e-06
UNIPROTKB|C9JP48	138	PPP1CB "Serine/threonine-prote	0.278	0.514	0.353	2.7e-06
CGD|CAL0003480	314	SIT4 [Candida albicans (taxid:	0.282	0.229	0.417	3.5e-06
UNIPROTKB|Q59KY8	314	SIT4 "Serine/threonine-protein	0.282	0.229	0.417	3.5e-06
TIGR_CMR|BA_0570	234	BA_0570 "serine/threonine phos	0.266	0.290	0.350	2.1e-05
UNIPROTKB|E9PPC8	132	PPP3CA "Serine/threonine-prote	0.266	0.515	0.392	2.7e-05

TAIR|locus:2100098 AT3G09970 "AT3G09970" [Arabidopsis thaliana (taxid:3702)]

 Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
 Identities = 163/250 (65%), Positives = 200/250 (80%)

Query:     3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLI 62
             +PR V C+GD+HGYISKL NLW NL++ I PSDF+SA++IFLGDYCDRGP TR+VIDFLI
Sbjct:     4 KPRTVICVGDIHGYISKLNNLWLNLQSAIDPSDFSSALVIFLGDYCDRGPETRKVIDFLI 63

Query:    63 SLPTKYPNQKHVFLSGNHDLGFAAXXXXXXXXXXXXXXKEGWKQYEQNEEREGWFKGDGY 122
             SLP K+P+Q HVFL+GNHD  F+               K+ WK+Y ++EE EGW+ G+G+
Sbjct:    64 SLPEKHPDQTHVFLAGNHDFAFSGFLGLLPRPSDGSDLKDTWKEYSKSEETEGWYTGEGF 123

Query:   123 EKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKF 182
             E MHLQGRRW GKI   FN+ KG  YKGSIYDA  TFESYGV HGS+DL+KAVP+ HKKF
Sbjct:   124 EDMHLQGRRWAGKIKATFNSVKGMAYKGSIYDAGSTFESYGVPHGSSDLMKAVPESHKKF 183

Query:   183 LADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALS 242
             L +M+WVHEED+VC+ET +G+KHCKLIAVHAGLE+G  V EQL+LL+AKDT + K++ LS
Sbjct:   184 LTNMVWVHEEDDVCIETEEGLKHCKLIAVHAGLEKGNNVEEQLKLLRAKDTSISKIQHLS 243

Query:   243 GRKNVWDIPE 252
             GRKNVWDIP+
Sbjct:   244 GRKNVWDIPQ 253

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

TAIR|locus:2100113 AT3G09960 "AT3G09960" [Arabidopsis thaliana (taxid:3702)]

 Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
 Identities = 156/251 (62%), Positives = 195/251 (77%)

Query:     3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLI 62
             +PR V C+GD+HG ISKL  LW NL++ I  SDF+SA++IFLGDYCDRGP TR+VIDFLI
Sbjct:     5 KPRTVICVGDIHGNISKLNKLWLNLQSDIQNSDFSSALVIFLGDYCDRGPETRKVIDFLI 64

Query:    63 SLPTKYPNQKHVFLSGNHDLGFAAXXXXXXXXXXXXXXKEGWKQYEQNEEREGWFKGDGY 122
             SLP K+P+Q HVFL+GNHD  FA               KE WK+Y ++EEREGW+KG+G+
Sbjct:    65 SLPEKHPDQTHVFLAGNHDFAFAGFLGLLPRPSDGSEFKETWKEYSKSEEREGWYKGEGF 124

Query:   123 EKMHLQGRRWGGKITVKFN-AAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKK 181
             E MHLQ RRW GKI V+F+ +A G  Y GSIYDAA TFESYGV HGS+DL+KAVP+ HKK
Sbjct:   125 ENMHLQSRRWAGKIRVQFDYSAYGVLYNGSIYDAASTFESYGVPHGSSDLIKAVPESHKK 184

Query:   182 FLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEAL 241
             FL +M+WVH+ED+VC+ET +G+ HCKLIAVHAGLE    V EQL+LL+ KDT +P+++ L
Sbjct:   185 FLTNMVWVHKEDDVCIETEEGLTHCKLIAVHAGLETKNNVEEQLKLLRDKDTSIPRIQPL 244

Query:   242 SGRKNVWDIPE 252
             +GRK VW IP+
Sbjct:   245 TGRKTVWGIPQ 255

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0005575 "cellular_component" evidence=ND

GO:0016787 "hydrolase activity" evidence=IEA

TIGR_CMR|SPO_3358 SPO_3358 "serine/threonine protein phosphatase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 136 (52.9 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
 Identities = 32/84 (38%), Positives = 47/84 (55%)

Query:     1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
             MS P  +  +GD+HG   +L+     +E   GP     A ++FLGDY DRGP++R V+D 
Sbjct:     1 MSTP--IYAVGDIHGQAEQLETALARIEADGGPD----ARVVFLGDYTDRGPDSRAVLDR 54

Query:    61 LISLPTKYPNQKHVFLSGNHDLGF 84
             LI+   +   +  + L GNHD  F
Sbjct:    55 LIAGQAQ--GRDWITLKGNHDRMF 76

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0006470 "protein dephosphorylation" evidence=ISS

TIGR_CMR|CBU_0488 CBU_0488 "serine/threonine protein phosphatase" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 139 (54.0 bits), Expect = 9.9e-08, P = 9.9e-08
 Identities = 32/76 (42%), Positives = 44/76 (57%)

Query:     6 RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLP 65
             RV  IGDVHG    L  + KN+E        +  I++ LGDY DRGP++R+VI+ LI LP
Sbjct:     8 RVYVIGDVHGCADLLTRMLKNIEKDAQLHPQSRHILVTLGDYIDRGPHSRKVIETLIHLP 67

Query:    66 TKYPNQKHVFLSGNHD 81
                   +  +L GNH+
Sbjct:    68 LNGFETR--YLKGNHE 81

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0006470 "protein dephosphorylation" evidence=ISS

GO:0008287 "protein serine/threonine phosphatase complex" evidence=ISS

UNIPROTKB|C9J9S3 PPP1CB "Serine/threonine-protein phosphatase" [Homo sapiens (taxid:9606)]

 Score = 112 (44.5 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 29/82 (35%), Positives = 44/82 (53%)

Query:     1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIG-PSDFNSAIIIFLGDYCDRGPNTREVID 59
             +  P ++C  GD+HG  + L  L++    + G P + N    +FLGDY DRG  + E I 
Sbjct:    54 LEAPLKIC--GDIHGQYTDLLRLFE----YGGFPPEAN---YLFLGDYVDRGKQSLETIC 104

Query:    60 FLISLPTKYPNQKHVFLSGNHD 81
              L++   KYP +    L GNH+
Sbjct:   105 LLLAYKIKYP-ENFFLLRGNHE 125

GO:0000164 "protein phosphatase type 1 complex" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA

GO:0005979 "regulation of glycogen biosynthetic process" evidence=IEA

GO:0005981 "regulation of glycogen catabolic process" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0042587 "glycogen granule" evidence=IEA

UNIPROTKB|C9JP48 PPP1CB "Serine/threonine-protein phosphatase" [Homo sapiens (taxid:9606)]

 Score = 112 (44.5 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 29/82 (35%), Positives = 44/82 (53%)

Query:     1 MSRPRRVCCIGDVHGYISKLQNLWKNLETHIG-PSDFNSAIIIFLGDYCDRGPNTREVID 59
             +  P ++C  GD+HG  + L  L++    + G P + N    +FLGDY DRG  + E I 
Sbjct:    54 LEAPLKIC--GDIHGQYTDLLRLFE----YGGFPPEAN---YLFLGDYVDRGKQSLETIC 104

Query:    60 FLISLPTKYPNQKHVFLSGNHD 81
              L++   KYP +    L GNH+
Sbjct:   105 LLLAYKIKYP-ENFFLLRGNHE 125

GO:0000164 "protein phosphatase type 1 complex" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA

GO:0005979 "regulation of glycogen biosynthetic process" evidence=IEA

GO:0005981 "regulation of glycogen catabolic process" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0042587 "glycogen granule" evidence=IEA

CGD|CAL0003480 SIT4 [Candida albicans (taxid:5476)]

 Score = 124 (48.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
 Identities = 33/79 (41%), Positives = 42/79 (53%)

Query:     4 PRRVCCIGDVHGYISKLQNLWKNLETHIG-PSDFNSAIIIFLGDYCDRGPNTREVIDFLI 62
             P  VC  GD+HG    L  L++   T  G PSD N    IFLGDY DRG  + E    L+
Sbjct:    47 PVTVC--GDIHGQFHDLLELFR---TAGGLPSDDNQTNFIFLGDYVDRGYFSLETFTLLM 101

Query:    63 SLPTKYPNQKHVFLSGNHD 81
              L  KYP+ +   + GNH+
Sbjct:   102 VLKVKYPH-RITLVRGNHE 119

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IGI;ISS

GO:0006468 "protein phosphorylation" evidence=IGI;ISS

GO:0009405 "pathogenesis" evidence=IMP

GO:0036180 "filamentous growth of a population of unicellular organisms in response to biotic stimulus" evidence=IMP

GO:0036178 "filamentous growth of a population of unicellular organisms in response to neutral pH" evidence=IMP

GO:0036170 "filamentous growth of a population of unicellular organisms in response to starvation" evidence=IMP

GO:1900436 "positive regulation of filamentous growth of a population of unicellular organisms in response to starvation" evidence=IMP

GO:1900442 "positive regulation of filamentous growth of a population of unicellular organisms in response to neutral pH" evidence=IMP

GO:0030447 "filamentous growth" evidence=IMP

GO:0036244 "cellular response to neutral pH" evidence=IMP

GO:0071216 "cellular response to biotic stimulus" evidence=IMP

GO:0070887 "cellular response to chemical stimulus" evidence=IMP

GO:0031929 "TOR signaling cascade" evidence=IGI

GO:0005829 "cytosol" evidence=IEA

GO:0000790 "nuclear chromatin" evidence=IEA

GO:0036171 "filamentous growth of a population of unicellular organisms in response to chemical stimulus" evidence=IGI;IMP

GO:1900439 "positive regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus" evidence=IMP

GO:0036168 "filamentous growth of a population of unicellular organisms in response to heat" evidence=IMP

GO:0002098 "tRNA wobble uridine modification" evidence=IEA

GO:0051983 "regulation of chromosome segregation" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0007346 "regulation of mitotic cell cycle" evidence=IEA

GO:0031505 "fungal-type cell wall organization" evidence=IEA

GO:0008360 "regulation of cell shape" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0001302 "replicative cell aging" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=IEA

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA

GO:0016311 "dephosphorylation" evidence=IEA

UNIPROTKB|Q59KY8 SIT4 "Serine/threonine-protein phosphatase" [Candida albicans SC5314 (taxid:237561)]

 Score = 124 (48.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
 Identities = 33/79 (41%), Positives = 42/79 (53%)

Query:     4 PRRVCCIGDVHGYISKLQNLWKNLETHIG-PSDFNSAIIIFLGDYCDRGPNTREVIDFLI 62
             P  VC  GD+HG    L  L++   T  G PSD N    IFLGDY DRG  + E    L+
Sbjct:    47 PVTVC--GDIHGQFHDLLELFR---TAGGLPSDDNQTNFIFLGDYVDRGYFSLETFTLLM 101

Query:    63 SLPTKYPNQKHVFLSGNHD 81
              L  KYP+ +   + GNH+
Sbjct:   102 VLKVKYPH-RITLVRGNHE 119

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IGI

GO:0006468 "protein phosphorylation" evidence=IGI

GO:0009405 "pathogenesis" evidence=IMP

GO:0030447 "filamentous growth" evidence=IMP

GO:0031929 "TOR signaling cascade" evidence=IGI

GO:0036168 "filamentous growth of a population of unicellular organisms in response to heat" evidence=IMP

GO:0036170 "filamentous growth of a population of unicellular organisms in response to starvation" evidence=IMP

GO:0036171 "filamentous growth of a population of unicellular organisms in response to chemical stimulus" evidence=IGI;IMP

GO:0036178 "filamentous growth of a population of unicellular organisms in response to neutral pH" evidence=IMP

GO:0036180 "filamentous growth of a population of unicellular organisms in response to biotic stimulus" evidence=IMP

GO:0036244 "cellular response to neutral pH" evidence=IMP

GO:0070887 "cellular response to chemical stimulus" evidence=IMP

GO:0071216 "cellular response to biotic stimulus" evidence=IMP

GO:1900436 "positive regulation of filamentous growth of a population of unicellular organisms in response to starvation" evidence=IMP

GO:1900439 "positive regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus" evidence=IMP

GO:1900442 "positive regulation of filamentous growth of a population of unicellular organisms in response to neutral pH" evidence=IMP

TIGR_CMR|BA_0570 BA_0570 "serine/threonine phosphatase, putative" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 105 (42.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
 Identities = 27/77 (35%), Positives = 38/77 (49%)

Query:     5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISL 64
             +R+  I D+HG I K + L +  +      D     +I LGDY DRGPN R VI+ +  L
Sbjct:     2 KRILVISDIHGEIEKFEQLLEEAQY-----DAKQDQLILLGDYVDRGPNARAVIEKVKEL 56

Query:    65 PTKYPNQKHVFLSGNHD 81
                      + L GNH+
Sbjct:    57 K----EDGALVLKGNHE 69

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0006470 "protein dephosphorylation" evidence=ISS

GO:0008287 "protein serine/threonine phosphatase complex" evidence=ISS

UNIPROTKB|E9PPC8 PPP3CA "Serine/threonine-protein phosphatase" [Homo sapiens (taxid:9606)]

 Score = 103 (41.3 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 31/79 (39%), Positives = 43/79 (54%)

Query:     4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
             P  VC  GD+HG    L  L++     +G S  N+  + FLGDY DRG  + E + +L +
Sbjct:    34 PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 85

Query:    64 LPTKYPNQKHVFL-SGNHD 81
             L   YP  K +FL  GNH+
Sbjct:    86 LKILYP--KTLFLLRGNHE 102

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA

GO:0001975 "response to amphetamine" evidence=IEA

GO:0004723 "calcium-dependent protein serine/threonine phosphatase activity" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005955 "calcineurin complex" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0006606 "protein import into nucleus" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0014883 "transition between fast and slow fiber" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030018 "Z disc" evidence=IEA

GO:0033173 "calcineurin-NFAT signaling cascade" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0046676 "negative regulation of insulin secretion" evidence=IEA

GO:0046982 "protein heterodimerization activity" evidence=IEA

GO:0048741 "skeletal muscle fiber development" evidence=IEA

GO:0050804 "regulation of synaptic transmission" evidence=IEA

GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IEA

GO:0071333 "cellular response to glucose stimulus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.6.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	255
cd07421	304	cd07421, MPP_Rhilphs, Rhilph phosphatases, metallo	1e-159
cd00144	225	cd00144, MPP_PPP_family, phosphoprotein phosphatas	2e-15
cd07419	311	cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 pho	3e-09
PTZ00239	303	PTZ00239, PTZ00239, serine/threonine protein phosp	5e-09
smart00156	271	smart00156, PP2Ac, Protein phosphatase 2A homologu	2e-08
pfam00149	185	pfam00149, Metallophos, Calcineurin-like phosphoes	1e-07
cd07414	293	cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-li	5e-07
cd07413	222	cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087	3e-06
cd07416	305	cd07416, MPP_PP2B, PP2B, metallophosphatase domain	4e-06
PHA02239	235	PHA02239, PHA02239, putative protein phosphatase	5e-06
cd07415	285	cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phos	6e-06
PTZ00480	320	PTZ00480, PTZ00480, serine/threonine-protein phosp	1e-05
PRK13625	245	PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphospha	5e-05
cd07420	321	cd07420, MPP_RdgC, Drosophila melanogaster RdgC an	9e-05
cd07424	207	cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophos	1e-04
cd07422	257	cd07422, MPP_ApaH, Escherichia coli ApaH and relat	2e-04
cd07417	316	cd07417, MPP_PP5_C, PP5, C-terminal metallophospha	2e-04
cd00838	131	cd00838, MPP_superfamily, metallophosphatase super	2e-04
PRK00166	275	PRK00166, apaH, diadenosine tetraphosphatase; Revi	2e-04
cd07423	234	cd07423, MPP_PrpE, Bacillus subtilis PrpE and rela	5e-04
TIGR04075	851	TIGR04075, bacter_Pnkp, polynucleotide kinase-phos	5e-04
cd07425	208	cd07425, MPP_Shelphs, Shewanella-like phosphatases	9e-04
PTZ00244	294	PTZ00244, PTZ00244, serine/threonine-protein phosp	0.001

>gnl|CDD|163664 cd07421, MPP_Rhilphs, Rhilph phosphatases, metallophosphatase domain

 Score =  444 bits (1144), Expect = e-159
 Identities = 174/249 (69%), Positives = 209/249 (83%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           PR V C+GD+HGYISKL NLW NL++ +GPSDF SA++IFLGDYCDRGP TR+VIDFLIS
Sbjct: 1   PRVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLIS 60

Query: 64  LPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYE 123
           LP K+P Q+HVFL GNHD  FAAF+GVLP P  G  FK  WK+YE+NEEREGW+KG+G+E
Sbjct: 61  LPEKHPKQRHVFLCGNHDFAFAAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFE 120

Query: 124 KMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFL 183
            MHLQGRRW GK+ V FN  +G  YKGSIYDA PTFESYGV HGS+DL+KAVP+ HKKFL
Sbjct: 121 NMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVPHGSSDLIKAVPEEHKKFL 180

Query: 184 ADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSG 243
            +++WVHEED+VC+ET +G+KHCKLIAVHAGLE+   V EQL+LL+ KDT +PK+  LSG
Sbjct: 181 RNLVWVHEEDDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPKIAPLSG 240

Query: 244 RKNVWDIPE 252
           RKNVW+IP+
Sbjct: 241 RKNVWNIPQ 249

Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 304

>gnl|CDD|163613 cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain

 Score = 72.5 bits (178), Expect = 2e-15
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 8/73 (10%)

Query: 9  CIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKY 68
           IGD+HG +  L  L +     IG     +  +IFLGDY DRGP++ EVID L++L  K 
Sbjct: 2  VIGDIHGCLDDLLRLLE----KIGFPP--NDKLIFLGDYVDRGPDSVEVIDLLLAL--KI 53

Query: 69 PNQKHVFLSGNHD 81
               + L GNH+
Sbjct: 54 LPDNVILLRGNHE 66

The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 225

>gnl|CDD|163662 cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain

 Score = 56.3 bits (136), Expect = 3e-09
 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 9/76 (11%)

Query: 11  GDVHGYISKLQNLWKNLETHIGPSDFNSAII-----IFLGDYCDRGPNTREVIDFLISLP 65
           GD+HG    L  L+    +   P    +  I     +FLGDY DRG N+ E I  L++L 
Sbjct: 54  GDIHGQFGDLMRLFDEYGS---PVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALK 110

Query: 66  TKYPNQKHVFLSGNHD 81
            KYPNQ H+ + GNH+
Sbjct: 111 VKYPNQIHL-IRGNHE 125

Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 311

>gnl|CDD|173488 PTZ00239, PTZ00239, serine/threonine protein phosphatase 2A; Provisional

 Score = 55.2 bits (133), Expect = 5e-09
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P  VC  GD+HG    LQ L+K         D  +A  IF+GD+ DRG N+ E +++
Sbjct: 41  VRAPVNVC--GDIHGQFYDLQALFKE------GGDIPNANYIFIGDFVDRGYNSVETMEY 92

Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L+ L  KYP      L GNH+
Sbjct: 93  LLCLKVKYP-GNITLLRGNHE 112

Length = 303

>gnl|CDD|197547 smart00156, PP2Ac, Protein phosphatase 2A homologues, catalytic domain

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 7/74 (9%)

Query: 7  VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPT 66
          V   GD+HG    L  L    + +  P + N    +FLGDY DRGP + EVI  L +L  
Sbjct: 30 VTVCGDIHGQFDDLLRL---FDKNGQPPETN---YVFLGDYVDRGPFSIEVILLLFALKI 83

Query: 67 KYPNQKHVFLSGNH 80
           YPN + V L GNH
Sbjct: 84 LYPN-RIVLLRGNH 96

Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. Length = 271

>gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase

 Score = 50.1 bits (119), Expect = 1e-07
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 6  RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLP 65
          R+  IGD+HG    L +L   L       +    +++FLGD  DRGP + EV+  L +L 
Sbjct: 1  RILVIGDLHG---GLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPPSLEVLALLFALK 57

Query: 66 TKYPNQKHVFLSGNHDLGFAA 86
           K P   ++ + GNHD     
Sbjct: 58 LKAPGPVYL-VRGNHDFDSGN 77

This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185

>gnl|CDD|163657 cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 11/79 (13%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIG-PSDFNSAIIIFLGDYCDRGPNTREVIDFLI 62
           P ++C  GD+HG    L  L++    + G P + N    +FLGDY DRG  + E I  L+
Sbjct: 51  PLKIC--GDIHGQYYDLLRLFE----YGGFPPESN---YLFLGDYVDRGKQSLETICLLL 101

Query: 63  SLPTKYPNQKHVFLSGNHD 81
           +   KYP      L GNH+
Sbjct: 102 AYKIKYPEN-FFLLRGNHE 119

PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 293

>gnl|CDD|163656 cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 7/81 (8%)

Query: 10 IGDVHGYISKLQNLWKNL--ETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTK 67
          IGD+HG+  KL  L   L  +   G        ++FLGD  DRGP  RE+++ + S+   
Sbjct: 4  IGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA 63

Query: 68 YPNQKHVF-LSGNHDLGFAAF 87
               H   + GNH+    A+
Sbjct: 64 ----GHALAVMGNHEFNAIAW 80

PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 222

>gnl|CDD|163659 cd07416, MPP_PP2B, PP2B, metallophosphatase domain

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 9/78 (11%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GD+HG    L  L    E    P++      +FLGDY DRG  + E + +L +
Sbjct: 44  PVTVC--GDIHGQFYDLLKL---FEVGGSPANTR---YLFLGDYVDRGYFSIECVLYLWA 95

Query: 64  LPTKYPNQKHVFLSGNHD 81
           L   YP      L GNH+
Sbjct: 96  LKILYPKT-LFLLRGNHE 112

PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 305

>gnl|CDD|107154 PHA02239, PHA02239, putative protein phosphatase

 Score = 45.8 bits (108), Expect = 5e-06
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)

Query: 10 IGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYP 69
          + D+HG   KL  +   +     P +     I+FLGDY DRG  +++V++++  L +   
Sbjct: 6  VPDIHGEYQKLLTIMDKINNERKPEE----TIVFLGDYVDRGKRSKDVVNYIFDLMSNDD 61

Query: 70 NQKHVFLSGNHD 81
          N   V L GNHD
Sbjct: 62 NV--VTLLGNHD 71

Length = 235

>gnl|CDD|163658 cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain

 Score = 46.1 bits (110), Expect = 6e-06
 Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 13/82 (15%)

Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIG--PSDFNSAIIIFLGDYCDRGPNTREVI 58
           +  P  VC  GD+HG    L  L++     +G  P D N    +FLGDY DRG  + E  
Sbjct: 40  VRSPVTVC--GDIHGQFYDLLELFR-----VGGDPPDTN---YLFLGDYVDRGYYSVETF 89

Query: 59  DFLISLPTKYPNQKHVFLSGNH 80
             L++L  +YP  +   L GNH
Sbjct: 90  LLLLALKVRYP-DRITLLRGNH 110

PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2A belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 285

>gnl|CDD|185658 PTZ00480, PTZ00480, serine/threonine-protein phosphatase; Provisional

 Score = 45.4 bits (107), Expect = 1e-05
 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 9/81 (11%)

Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P ++C  GDVHG    L  L+   E    P + N    +FLGDY DRG  + E I  
Sbjct: 57  LEAPLKIC--GDVHGQYFDLLRLF---EYGGYPPESN---YLFLGDYVDRGKQSLETICL 108

Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L++   KYP +    L GNH+
Sbjct: 109 LLAYKIKYP-ENFFLLRGNHE 128

Length = 320

>gnl|CDD|184187 PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 10 IGDVHGYISKLQNLWKNLETHIG---PSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPT 66
          IGD+HG   + Q L + L  +     P   +   + F+GD  DRGP++  +I+ +  L  
Sbjct: 6  IGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWEL-- 63

Query: 67 KYPNQKHVFLSGNH 80
              +   ++ GNH
Sbjct: 64 -VEKKAAYYVPGNH 76

Length = 245

>gnl|CDD|163663 cd07420, MPP_RdgC, Drosophila melanogaster RdgC and related proteins, metallophosphatase domain

 Score = 42.8 bits (101), Expect = 9e-05
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 10/76 (13%)

Query: 7   VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPT 66
           +C  GD+HG   KL +L+     +  PS  N    +F GD+ DRG  + E++  L +   
Sbjct: 55  IC--GDLHG---KLDDLFLIFYKNGLPSPENP--YVFNGDFVDRGKRSIEILIILFAFFL 107

Query: 67  KYPNQKHVFLS-GNHD 81
            YPN   V L+ GNH+
Sbjct: 108 VYPN--EVHLNRGNHE 121

RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 321

>gnl|CDD|163667 cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 20/77 (25%)

Query: 10 IGDVHGYISKLQNLWKNLETHIGPSDFNSAI--IIFLGDYCDRGPNTREVIDFLISLPTK 67
          +GD+HG+ S LQ     L+       F+ A   +I +GD  DRGP +   ++ L      
Sbjct: 6  VGDIHGHYSLLQKA---LDAV----GFDPARDRLISVGDLIDRGPESLACLELL------ 52

Query: 68 YPNQKHVFLS--GNHDL 82
              +  F +  GNH+ 
Sbjct: 53 ---LEPWFHAVRGNHEQ 66

PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 207

>gnl|CDD|163665 cd07422, MPP_ApaH, Escherichia coli ApaH and related proteins, metallophosphatase domain

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 14/75 (18%)

Query: 10 IGDVHGYISKLQNLWKNLETHIGPSDFNSA--IIIFLGDYCDRGPNTREVIDFLISLPTK 67
          IGD+ G   +LQ L   LE  I   +F+ A   +  +GD  +RGP++ E + F+ SL   
Sbjct: 4  IGDIQGCYDELQRL---LE-KI---NFDPAKDRLWLVGDLVNRGPDSLETLRFVKSL--- 53

Query: 68 YPNQKHVFLSGNHDL 82
            +     L GNHDL
Sbjct: 54 -GDSAKTVL-GNHDL 66

ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathways in unknown. The PPP (phosphoprotein phosphatase) family, to which ApaH belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and PrpA/PrpB. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 257

>gnl|CDD|163660 cd07417, MPP_PP5_C, PP5, C-terminal metallophosphatase domain

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 10/76 (13%)

Query: 7   VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPT 66
           VC  GD HG    L N++   E +  PS+ N    +F GD+ DRG  + EVI  L +   
Sbjct: 64  VC--GDTHGQFYDLLNIF---ELNGLPSETNP--YLFNGDFVDRGSFSVEVILTLFAFKL 116

Query: 67  KYPNQKHVFLS-GNHD 81
            YPN  H  L+ GNH+
Sbjct: 117 LYPN--HFHLNRGNHE 130

Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 316

>gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 9  CIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKY 68
           I D+HG +  L+ + +         DF    ++ LGD    GP+  EV+   ++L    
Sbjct: 2  VISDIHGNLEALEAVLEAALAAAEKPDF----VLVLGDLVGDGPDPEEVLAAALALLLLL 57

Query: 69 PNQKHVFLSGNHDL 82
              +  + GNHD+
Sbjct: 58 GIPVY-VVPGNHDI 70

Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131

>gnl|CDD|234673 PRK00166, apaH, diadenosine tetraphosphatase; Reviewed

 Score = 41.3 bits (98), Expect = 2e-04
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 14/76 (18%)

Query: 9  CIGDVHGYISKLQNLWKNLETHIGPSDFNSA--IIIFLGDYCDRGPNTREVIDFLISLPT 66
           IGD+ G   +LQ L   LE      DF+ A   +  +GD  +RGP++ EV+ F+ SL  
Sbjct: 5  AIGDIQGCYDELQRL---LEK----IDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL-- 55

Query: 67 KYPNQKHVFLSGNHDL 82
             +     L GNHDL
Sbjct: 56 --GDSAVTVL-GNHDL 68

Length = 275

>gnl|CDD|163666 cd07423, MPP_PrpE, Bacillus subtilis PrpE and related proteins, metallophosphatase domain

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 13/79 (16%)

Query: 10 IGDVHGYISKLQNL-------WKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLI 62
          IGDVHG   +L+ L        K + T   P        +F+GD  DRGP++ EV+  ++
Sbjct: 6  IGDVHGCYDELEELLEKLGYRIKRVGTVTHP---EGRRAVFVGDLVDRGPDSPEVLRLVM 62

Query: 63 SLPTKYPNQKHVFLSGNHD 81
          S+         + + GNHD
Sbjct: 63 SM---VAAGAALCVPGNHD 78

PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 234

>gnl|CDD|234457 TIGR04075, bacter_Pnkp, polynucleotide kinase-phosphatase

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 14/82 (17%)

Query: 10  IGDVHGYISKLQNLWKNLETHIGPSDFNSAI---------IIFLGDYCDRGPNTREVIDF 60
           IGDVHG   +L+ L + L   I   +    +          +F+GD  DRGP++  V+  
Sbjct: 185 IGDVHGCRDELETLLEELGYQIERDEGGRPVDVTHPEGRKAVFVGDLVDRGPDSPGVLRL 244

Query: 61  LISLPTKYPNQKHVF-LSGNHD 81
           ++ +            + GNHD
Sbjct: 245 VMGM----VAAGTALCVPGNHD 262

Members of this protein family are the bacterial polynucleotide kinase-phosphatase (Pnkp) whose genes occur paired with genes for the 3' terminal RNA ribose 2'-O-methyltransferase Hen1. All members of the seed alignment belong to a cassette with the Hen1. The pair acts in bacterial RNA repair. This enzyme performs end-healing reactions on broken RNA, preparing from the RNA ligase to close the break. The working hypothesis is that the combination of Pnkp (RNA repair) and Hen1 (RNA modification) serves to first repair RNA damage from ribotoxins and then perform a modification that prevents the damage from recurring [Transcription, RNA processing]. Length = 851

>gnl|CDD|163668 cd07425, MPP_Shelphs, Shewanella-like phosphatases, metallophosphatase domain

 Score = 39.2 bits (92), Expect = 9e-04
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 12/82 (14%)

Query: 9  CIGDVHGYISKLQNLWK-----NLETH-IGPSDFNSAIIIFLGDYCDRGPNTREVIDFLI 62
           IGD+HG +   + + K     +   H IG S      ++ LGD  DRGP+  E++  L 
Sbjct: 2  AIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTH----LVQLGDIFDRGPDVIEILWLLY 57

Query: 63 SLPT--KYPNQKHVFLSGNHDL 82
           L         K  FL GNH+L
Sbjct: 58 KLEQEAAKAGGKVHFLLGNHEL 79

This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 208

>gnl|CDD|140271 PTZ00244, PTZ00244, serine/threonine-protein phosphatase PP1; Provisional

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 9/78 (11%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P RVC  GD HG   +  +L +  E    P   N    +FLGDY DRG ++ E I     
Sbjct: 53  PVRVC--GDTHG---QYYDLLRIFEKCGFPPYSN---YLFLGDYVDRGKHSVETITLQFC 104

Query: 64  LPTKYPNQKHVFLSGNHD 81
               YP +    L GNH+
Sbjct: 105 YKIVYP-ENFFLLRGNHE 121

Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	255
cd07421	304	MPP_Rhilphs Rhilph phosphatases, metallophosphatas	100.0
PHA02239	235	putative protein phosphatase	99.96
PRK13625	245	bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision	99.94
cd07420	321	MPP_RdgC Drosophila melanogaster RdgC and related	99.93
cd07413	222	MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat	99.93
TIGR00668	279	apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric	99.93
cd07423	234	MPP_PrpE Bacillus subtilis PrpE and related protei	99.92
PRK11439	218	pphA serine/threonine protein phosphatase 1; Provi	99.92
PRK00166	275	apaH diadenosine tetraphosphatase; Reviewed	99.92
cd07422	257	MPP_ApaH Escherichia coli ApaH and related protein	99.91
KOG0372	303	consensus Serine/threonine specific protein phosph	99.9
cd07418	377	MPP_PP7 PP7, metallophosphatase domain. PP7 is a p	99.9
cd07417	316	MPP_PP5_C PP5, C-terminal metallophosphatase domai	99.9
smart00156	271	PP2Ac Protein phosphatase 2A homologues, catalytic	99.9
cd07416	305	MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca	99.9
PTZ00239	303	serine/threonine protein phosphatase 2A; Provision	99.9
PTZ00244	294	serine/threonine-protein phosphatase PP1; Provisio	99.9
cd07415	285	MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein	99.9
cd07414	293	MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme	99.89
PTZ00480	320	serine/threonine-protein phosphatase; Provisional	99.89
cd07419	311	MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a	99.89
KOG0373	306	consensus Serine/threonine specific protein phosph	99.89
cd00144	225	MPP_PPP_family phosphoprotein phosphatases of the	99.87
PRK09968	218	serine/threonine-specific protein phosphatase 2; P	99.86
cd07425	208	MPP_Shelphs Shewanella-like phosphatases, metallop	99.86
KOG0371	319	consensus Serine/threonine protein phosphatase 2A,	99.85
cd07424	207	MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do	99.84
KOG0374	331	consensus Serine/threonine specific protein phosph	99.82
KOG0375	517	consensus Serine-threonine phosphatase 2B, catalyt	99.79
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	99.6
PRK09453	182	phosphodiesterase; Provisional	99.32
KOG0376	476	consensus Serine-threonine phosphatase 2A, catalyt	99.17
cd07388	224	MPP_Tt1561 Thermus thermophilus Tt1561 and related	99.14
TIGR00040	158	yfcE phosphoesterase, MJ0936 family. Members of th	99.0
PF00149	200	Metallophos: Calcineurin-like phosphoesterase; Int	98.98
PF12850	156	Metallophos_2: Calcineurin-like phosphoesterase su	98.94
cd00841	155	MPP_YfcE Escherichia coli YfcE and related protein	98.92
cd07385	223	MPP_YkuE_C Bacillus subtilis YkuE and related prot	98.8
PRK11340	271	phosphodiesterase YaeI; Provisional	98.79
cd07392	188	MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel	98.75
cd07379	135	MPP_239FB Homo sapiens 239FB and related proteins,	98.68
cd07397	238	MPP_DevT Myxococcus xanthus DevT and related prote	98.68
PRK05340	241	UDP-2,3-diacylglucosamine hydrolase; Provisional	98.66
cd07404	166	MPP_MS158 Microscilla MS158 and related proteins,	98.57
TIGR03729	239	acc_ester putative phosphoesterase. Members of thi	98.57
TIGR00619	253	sbcd exonuclease SbcD. This family is based on the	98.4
cd07402	240	MPP_GpdQ Enterobacter aerogenes GpdQ and related p	98.37
cd07396	267	MPP_Nbla03831 Homo sapiens Nbla03831 and related p	98.35
PRK11148	275	cyclic 3',5'-adenosine monophosphate phosphodieste	98.34
cd07390	168	MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro	98.31
PHA02546	340	47 endonuclease subunit; Provisional	98.31
TIGR01854	231	lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase.	98.3
cd00838	131	MPP_superfamily metallophosphatase superfamily, me	98.3
cd07394	178	MPP_Vps29 Homo sapiens Vps29 and related proteins,	98.27
cd07400	144	MPP_YydB Bacillus subtilis YydB and related protei	98.24
cd07391	172	MPP_PF1019 Pyrococcus furiosus PF1019 and related	98.23
cd00840	223	MPP_Mre11_N Mre11 nuclease, N-terminal metallophos	98.21
COG2129	226	Predicted phosphoesterases, related to the Icc pro	98.16
cd07393	232	MPP_DR1119 Deinococcus radiodurans DR1119 and rela	98.14
cd07403	129	MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel	98.12
COG4186	186	Predicted phosphoesterase or phosphohydrolase [Gen	98.11
PRK10966	407	exonuclease subunit SbcD; Provisional	98.09
TIGR00583	405	mre11 DNA repair protein (mre11). All proteins in	98.09
cd07399	214	MPP_YvnB Bacillus subtilis YvnB and related protei	98.09
TIGR00024	225	SbcD_rel_arch putative phosphoesterase, SbcD/Mre11	98.08
cd08165	156	MPP_MPPE1 human MPPE1 and related proteins, metall	98.07
cd07395	262	MPP_CSTP1 Homo sapiens CSTP1 and related proteins,	98.07
COG1408	284	Predicted phosphohydrolases [General function pred	98.07
COG1409	301	Icc Predicted phosphohydrolases [General function	98.06
PRK04036	504	DNA polymerase II small subunit; Validated	98.05
COG0622	172	Predicted phosphoesterase [General function predic	98.02
COG0420	390	SbcD DNA repair exonuclease [DNA replication, reco	97.99
cd07383	199	MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase	97.96
PF14582	255	Metallophos_3: Metallophosphoesterase, calcineurin	97.93
cd00844	262	MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t	97.9
cd07386	243	MPP_DNA_pol_II_small_archeal_C archeal DNA polymer	97.89
cd07398	217	MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat	97.87
COG2908	237	Uncharacterized protein conserved in bacteria [Fun	97.77
cd07401	256	MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal	97.76
cd00845	252	MPP_UshA_N_like Escherichia coli UshA-like family,	97.73
cd00839	294	MPP_PAPs purple acid phosphatases of the metalloph	97.72
cd08166	195	MPP_Cdc1_like_1 uncharacterized subgroup related t	97.41
cd07410	277	MPP_CpdB_N Escherichia coli CpdB and related prote	97.38
cd07384	171	MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re	97.33
KOG0373	306	consensus Serine/threonine specific protein phosph	97.21
cd07380	150	MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re	97.2
KOG0372	303	consensus Serine/threonine specific protein phosph	97.15
PLN02533	427	probable purple acid phosphatase	97.11
COG1768	230	Predicted phosphohydrolase [General function predi	97.02
COG1407	235	Predicted ICC-like phosphoesterases [General funct	97.02
cd07408	257	MPP_SA0022_N Staphylococcus aureus SA0022 and rela	96.99
cd08163	257	MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related	96.87
cd07412	288	MPP_YhcR_N Bacillus subtilis YhcR endonuclease and	96.77
cd08164	193	MPP_Ted1 Saccharomyces cerevisiae Ted1 and related	96.7
cd07378	277	MPP_ACP5 Homo sapiens acid phosphatase 5 and relat	96.68
cd07406	257	MPP_CG11883_N Drosophila melanogaster CG11883 and	96.62
TIGR00282	266	metallophosphoesterase, MG_246/BB_0505 family. A m	96.59
cd07411	264	MPP_SoxB_N Thermus thermophilus SoxB and related p	96.53
PF06874	640	FBPase_2: Firmicute fructose-1,6-bisphosphatase; I	96.44
KOG3662	410	consensus Cell division control protein/predicted	96.4
cd00842	296	MPP_ASMase acid sphingomyelinase and related prote	96.2
PRK09419	1163	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	96.17
cd07409	281	MPP_CD73_N CD73 ecto-5'-nucleotidase and related p	96.17
cd07382	255	MPP_DR1281 Deinococcus radiodurans DR1281 and rela	96.1
cd08162	313	MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA	95.66
KOG1432	379	consensus Predicted DNA repair exonuclease SIA1 [G	95.37
PRK09420	649	cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp	94.98
cd07407	282	MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and	94.94
cd07405	285	MPP_UshA_N Escherichia coli UshA and related prote	94.9
TIGR01390	626	CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod	94.88
COG3855	648	Fbp Uncharacterized protein conserved in bacteria	94.82
TIGR01530	550	nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi	94.53
PRK11907	814	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	94.26
PRK09419	1163	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	94.19
COG0737	517	UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras	94.19
KOG2310	646	consensus DNA repair exonuclease MRE11 [Replicatio	93.6
PF04042	209	DNA_pol_E_B: DNA polymerase alpha/epsilon subunit	93.54
KOG2863	456	consensus RNA lariat debranching enzyme [RNA proce	93.47
PRK09418	780	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	93.31
PRK09558	551	ushA bifunctional UDP-sugar hydrolase/5'-nucleotid	93.04
cd07387	257	MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2	92.8
COG1311	481	HYS2 Archaeal DNA polymerase II, small subunit/DNA	92.65
KOG2476	528	consensus Uncharacterized conserved protein [Funct	91.06
KOG0371	319	consensus Serine/threonine protein phosphatase 2A,	90.29
PTZ00422	394	glideosome-associated protein 50; Provisional	90.04
KOG3947	305	consensus Phosphoesterases [General function predi	89.87
KOG1378	452	consensus Purple acid phosphatase [Carbohydrate tr	89.84
COG1692	266	Calcineurin-like phosphoesterase [General function	88.56
KOG2679	336	consensus Purple (tartrate-resistant) acid phospha	87.7
KOG3325	183	consensus Membrane coat complex Retromer, subunit	87.47
PTZ00235	291	DNA polymerase epsilon subunit B; Provisional	87.42
KOG3770	577	consensus Acid sphingomyelinase and PHM5 phosphate	81.24

>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain

Probab=100.00  E-value=1.1e-50  Score=362.53  Aligned_cols=251  Identities=69%  Similarity=1.307  Sum_probs=231.8

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      ++++++||||||+++.|+++|+.+...........+.+||+||+|||||+|.+|+++++++...+|..++++|+||||.+
T Consensus         1 ~~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~   80 (304)
T cd07421           1 PRVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFA   80 (304)
T ss_pred             CceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHH
Confidence            35899999999999999999998865422111234689999999999999999999999998877644689999999999


Q ss_pred             hhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290           84 FAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG  163 (255)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~  163 (255)
                      ++.+++..+.++++..|.+.|++|..++|.+.|+++.|||-||.++|+|++.+.++||.+.+.+|.+++|++.+|+.||+
T Consensus        81 ~l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYG  160 (304)
T cd07421          81 FAAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYG  160 (304)
T ss_pred             HHhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcC
Confidence            99999987788889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccC
Q 025290          164 VAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSG  243 (255)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~  243 (255)
                      +.+....+.++++++|++||++||++++.+++|+.+.++...|+.+|||||+.|+.++++|.+.|..+++..|+.+.+.+
T Consensus       161 v~~~~~~l~~avP~~H~~fl~~l~~~~~~~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~~~~l~~  240 (304)
T cd07421         161 VPHGSSDLIKAVPEEHKKFLRNLVWVHEEDDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPKIAPLSG  240 (304)
T ss_pred             CCcchHHHHHhCCHHHHHHHHhCCceEEeCcccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccccccccc
Confidence            99888889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCccc
Q 025290          244 RKNVWDIPEVI  254 (255)
Q Consensus       244 ~~~~w~~~~~~  254 (255)
                      |+.+|++|...
T Consensus       241 R~~f~~~~~~~  251 (304)
T cd07421         241 RKNVWNIPQEL  251 (304)
T ss_pred             chhhhcCcccc
Confidence            99999998754

Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol

>PHA02239 putative protein phosphatase

Probab=99.96  E-value=2.4e-29  Score=220.95  Aligned_cols=160  Identities=27%  Similarity=0.372  Sum_probs=121.5

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      ||+++||||||++..|+++++.+.....    +.+.+|++||+|||||.|.++++.++++....  .++++|+||||.++
T Consensus         1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~----~~d~li~lGD~iDrG~~s~~v~~~l~~~~~~~--~~~~~l~GNHE~~~   74 (235)
T PHA02239          1 MAIYVVPDIHGEYQKLLTIMDKINNERK----PEETIVFLGDYVDRGKRSKDVVNYIFDLMSND--DNVVTLLGNHDDEF   74 (235)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHhhcCC----CCCEEEEecCcCCCCCChHHHHHHHHHHhhcC--CCeEEEECCcHHHH
Confidence            6899999999999999999999865421    24899999999999999999999998875432  26899999999999


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhh-cccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEER-EGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG  163 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~  163 (255)
                      ++++..   +..             .... ..|++             +||                     .+|+.||+
T Consensus        75 l~~~~~---~~~-------------~~~~~~~wl~-------------~GG---------------------~~Tl~Syg  104 (235)
T PHA02239         75 YNIMEN---VDR-------------LSIYDIEWLS-------------RYC---------------------IETLNSYG  104 (235)
T ss_pred             HHHHhC---chh-------------cccchHHHHH-------------cCC---------------------HHHHHHcC
Confidence            998753   100             0000 13443             444                     77777776


Q ss_pred             CCcChH------------------HH----HhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCCh
Q 025290          164 VAHGSA------------------DL----VKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKV  221 (255)
Q Consensus       164 ~~~~~~------------------~~----~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l  221 (255)
                      ......                  .+    .....+++..|+++||++++.+             +++|||||++|..++
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~-------------~~ifVHAGi~p~~~~  171 (235)
T PHA02239        105 VSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKED-------------KYIFSHSGGVSWKPV  171 (235)
T ss_pred             CCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEEC-------------CEEEEeCCCCCCCCh
Confidence            543210                  00    0123478889999999999999             899999999999999


Q ss_pred             HHHHH--HhhhccC
Q 025290          222 GEQLE--LLKAKDT  233 (255)
Q Consensus       222 ~~q~~--~~~~r~~  233 (255)
                      .+|..  ++|+|++
T Consensus       172 ~~q~~~~llWiR~f  185 (235)
T PHA02239        172 EEQTIDQLIWSRDF  185 (235)
T ss_pred             hhCCHhHeEEeccc
Confidence            99988  6899983

>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional

Probab=99.94  E-value=3.9e-26  Score=201.70  Aligned_cols=143  Identities=22%  Similarity=0.332  Sum_probs=106.1

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCC---CCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPS---DFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~---~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      ||++||||||||+++|+++|+++++.....   .+..+++||+||+|||||+|.+|+++++++...   .++++|+||||
T Consensus         1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~~~---~~~~~l~GNHE   77 (245)
T PRK13625          1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELVEK---KAAYYVPGNHC   77 (245)
T ss_pred             CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHhhC---CCEEEEeCccH
Confidence            689999999999999999999988752111   013589999999999999999999999988533   26999999999


Q ss_pred             cchhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhh
Q 025290           82 LGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFES  161 (255)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~s  161 (255)
                      .++++++...                      ..|.             .+|+                     .+|+.+
T Consensus        78 ~~~l~~~~~~----------------------~~~~-------------~~gg---------------------~~tl~~  101 (245)
T PRK13625         78 NKLYRFFLGR----------------------NVTI-------------AHGL---------------------ETTVAE  101 (245)
T ss_pred             HHHHHHHhCC----------------------Cccc-------------cchh---------------------HhHHHH
Confidence            9999876531                      0122             2333                     667777


Q ss_pred             cCCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCC
Q 025290          162 YGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGK  219 (255)
Q Consensus       162 y~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~  219 (255)
                      |.....  .....+.+.+.+|++++|+++....           ++++|||||+.|..
T Consensus       102 ~~~~~~--~~~~~~~~~~~~~~~~lPl~~~~~~-----------~~~~~vHAG~~~~~  146 (245)
T PRK13625        102 YEALPS--HKQNMIKEKFITLYEQAPLYHILDE-----------GRLVVAHAGIRQDY  146 (245)
T ss_pred             HhccCh--hhHHHHHHHHHHHHHhCCceEEEeC-----------CCEEEEECCCChHh
Confidence            643211  1122355678999999999986631           17999999998873

>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain

Probab=99.93  E-value=9.5e-26  Score=205.75  Aligned_cols=135  Identities=20%  Similarity=0.286  Sum_probs=106.1

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .+++|||||||++..|.++++..+...     +.++++|+||+||||+.|.+|+.++..++..+|+ +++++|||||.+.
T Consensus        51 ~~~~vvGDiHG~~~dL~~il~~~g~~~-----~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~-~v~llRGNHE~~~  124 (321)
T cd07420          51 KQVTICGDLHGKLDDLFLIFYKNGLPS-----PENPYVFNGDFVDRGKRSIEILIILFAFFLVYPN-EVHLNRGNHEDHI  124 (321)
T ss_pred             CCeEEEEeCCCCHHHHHHHHHHcCCCC-----ccceEEEeccccCCCCCcHHHHHHHHHHhhcCCC-cEEEecCchhhhh
Confidence            589999999999999999999876532     2478999999999999999999999999999985 8999999999988


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      ++...+                                           -                    ..++...|+.
T Consensus       125 ~~~~yG-------------------------------------------f--------------------~~e~~~~y~~  141 (321)
T cd07420         125 MNLRYG-------------------------------------------F--------------------TKEVMSKYKL  141 (321)
T ss_pred             hhhhcC-------------------------------------------h--------------------HHHHHHHhCc
Confidence            764321                                           0                    0344444542


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHH
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLE  226 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~  226 (255)
                      .      ...+.....++++.||++..++.            ++++|||||.|..++++-..
T Consensus       142 ~------~~~l~~~~~~~F~~LPlaaii~~------------~i~cvHGGi~~~~~l~~i~~  185 (321)
T cd07420         142 H------GKKILRLLEDVFSWLPLATIIDN------------KILVVHGGISDSTDLDLLDK  185 (321)
T ss_pred             c------HHHHHHHHHHHHHhCCceEEEcC------------CEEEEeCCCCCccCHHHHHh
Confidence            1      12345678999999999998872            79999999987666654333

RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all

>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain

Probab=99.93  E-value=1.2e-25  Score=195.99  Aligned_cols=140  Identities=22%  Similarity=0.359  Sum_probs=101.2

Q ss_pred             EEEccCCCCHHHHHHHHHHhhhccCCC--CCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccchh
Q 025290            8 CCIGDVHGYISKLQNLWKNLETHIGPS--DFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFA   85 (255)
Q Consensus         8 ~vigDIHG~~~~l~~lL~~~~~~~~~~--~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~   85 (255)
                      +||||||||+++|+++|++++++....  ..+.+++||+||+|||||+|.+|+++++++...   .++++|+||||.+++
T Consensus         2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~---~~~~~l~GNHE~~ll   78 (222)
T cd07413           2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA---GHALAVMGNHEFNAI   78 (222)
T ss_pred             EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC---CCEEEEEccCcHHHH
Confidence            799999999999999999998753211  012579999999999999999999999998654   269999999999999


Q ss_pred             hhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCCC
Q 025290           86 AFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVA  165 (255)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~~  165 (255)
                      +++...  |                 ....|++..            |+..               .....++++++...
T Consensus        79 ~~~~~~--~-----------------~~~~w~~~~------------~~~~---------------~~~~~~~l~~~~~~  112 (222)
T cd07413          79 AWHTKD--P-----------------SGGEWLRAH------------SKKN---------------LRQHQAFLEQFREH  112 (222)
T ss_pred             HhhhCC--c-----------------ccchhhhcC------------CCcc---------------cccHHHHHHHHhcc
Confidence            876431  1                 112343211            1100               00013455554311


Q ss_pred             cChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeecc
Q 025290          166 HGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLE  216 (255)
Q Consensus       166 ~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~  216 (255)
                             .+..+++++||++||++++.+             +++|||||++
T Consensus       113 -------~~~~~~~~~~l~~lP~~~~~~-------------~~~~VHAg~~  143 (222)
T cd07413         113 -------SEEHKDWLEWFKTLPLFLDLG-------------GVRVVHACWD  143 (222)
T ss_pred             -------chhHHHHHHHHhcCCcEEEEC-------------CEEEEECCcC
Confidence                   234578999999999999988             8999999986

PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of

>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical)

Probab=99.93  E-value=2.4e-25  Score=198.85  Aligned_cols=134  Identities=26%  Similarity=0.388  Sum_probs=104.7

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      |++|||||||||+++|+++|+++++...     .|.++|+||+|||||+|.+|+++++++..     ++++|+||||.++
T Consensus         1 m~~YvIGDIHGc~daL~~LL~~i~f~~~-----~D~l~~lGDlVdRGP~slevL~~l~~l~~-----~~~~VlGNHD~~l   70 (279)
T TIGR00668         1 MATYLIGDLHGCYDELQALLERVEFDPG-----QDTLWLTGDLVARGPGSLEVLRYVKSLGD-----AVRLVLGNHDLHL   70 (279)
T ss_pred             CcEEEEEcccCCHHHHHHHHHHhCcCCC-----CCEEEEeCCccCCCCCHHHHHHHHHhcCC-----CeEEEEChhHHHH
Confidence            5799999999999999999999987642     58999999999999999999999999864     4789999999998


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      +..+......                                      .                     ...++.    
T Consensus        71 L~~~~g~~~~--------------------------------------~---------------------~~d~l~----   87 (279)
T TIGR00668        71 LAVFAGISRN--------------------------------------K---------------------PKDRLD----   87 (279)
T ss_pred             HHHhcCCCcc--------------------------------------C---------------------chHHHH----
Confidence            8865421000                                      0                     011211    


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHH
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLE  226 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~  226 (255)
                          +.+.....+++++||+++|+.++.+.           .++++|||||.|..++.+...
T Consensus        88 ----~~l~a~~~~ell~wLr~lPl~i~~~~-----------~~~~lVHAGi~P~w~l~~a~~  134 (279)
T TIGR00668        88 ----PLLEAPDADELLNWLRRQPLLQHDEE-----------KKLVMAHAGITPQWDLQTAKE  134 (279)
T ss_pred             ----HHHHccCHHHHHHHHHcCCcEEEeCC-----------CCEEEEecCCCCCCcHHHHHH
Confidence                12345667899999999999986541           169999999999999865544

Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.

>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain

Probab=99.92  E-value=6.5e-25  Score=192.47  Aligned_cols=139  Identities=24%  Similarity=0.333  Sum_probs=102.0

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCC----CCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCc
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGP----SDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNH   80 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~----~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNH   80 (255)
                      |||+||||||||+.+|+++|+++++....    ...+.+++||+||+|||||.|.+|+++++++..+   .++++|+|||
T Consensus         1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~---~~~~~v~GNH   77 (234)
T cd07423           1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA---GAALCVPGNH   77 (234)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC---CcEEEEECCc
Confidence            68999999999999999999999775321    0112589999999999999999999999998643   2589999999


Q ss_pred             ccchhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhh
Q 025290           81 DLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFE  160 (255)
Q Consensus        81 E~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~  160 (255)
                      |.++++++....                      .+.             ..|+                     ..|+.
T Consensus        78 E~~l~~~~~~~~----------------------~~~-------------~~~~---------------------~~t~~  101 (234)
T cd07423          78 DNKLYRKLQGRN----------------------VKI-------------THGL---------------------EETVA  101 (234)
T ss_pred             HHHHHHHhcCCC----------------------ccc-------------cCcc---------------------cchHH
Confidence            999998765310                      000             0111                     33444


Q ss_pred             hcCCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCC
Q 025290          161 SYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGK  219 (255)
Q Consensus       161 sy~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~  219 (255)
                      +|..      ....+.+++.+||++||++++.+.           ++++|||||+.+..
T Consensus       102 ~~~~------~~~~~~~~~~~~l~~lP~~~~~~~-----------~~~~~vHag~~~~~  143 (234)
T cd07423         102 QLEA------ESEEFKEEVIEFYESLPSHLVLDE-----------GKLVVAHAGIKEEM  143 (234)
T ss_pred             HHhh------ccHHHHHHHHHHHHhCCcEEEeCC-----------CcEEEEeCCCChHh
Confidence            4431      123445678999999999887641           17999999987653

PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp

>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional

Probab=99.92  E-value=6.4e-25  Score=190.73  Aligned_cols=75  Identities=23%  Similarity=0.344  Sum_probs=66.2

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .+|++||||||||+.+|+++|+.+++..     ..|++|++||+|||||+|.+|++++++.       ++++|+||||.+
T Consensus        16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~-----~~D~li~lGDlvDrGp~s~~vl~~l~~~-------~~~~v~GNHE~~   83 (218)
T PRK11439         16 WRHIWLVGDIHGCFEQLMRKLRHCRFDP-----WRDLLISVGDLIDRGPQSLRCLQLLEEH-------WVRAVRGNHEQM   83 (218)
T ss_pred             CCeEEEEEcccCCHHHHHHHHHhcCCCc-----ccCEEEEcCcccCCCcCHHHHHHHHHcC-------CceEeeCchHHH
Confidence            4699999999999999999999997753     2589999999999999999999999763       468999999999


Q ss_pred             hhhhhcC
Q 025290           84 FAAFVGV   90 (255)
Q Consensus        84 ~~~~~~~   90 (255)
                      +++++..
T Consensus        84 ~l~~~~~   90 (218)
T PRK11439         84 ALDALAS   90 (218)
T ss_pred             HHHHHHC
Confidence            9987653

>PRK00166 apaH diadenosine tetraphosphatase; Reviewed

Probab=99.92  E-value=9.2e-25  Score=195.90  Aligned_cols=131  Identities=26%  Similarity=0.406  Sum_probs=100.1

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      |+++||||||||+.+|+++|+++++...     .|.+|++||+|||||+|.+|+++++++..     ++++|+||||.++
T Consensus         1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~-----~D~li~lGDlVdrGp~s~~vl~~l~~l~~-----~~~~VlGNHD~~l   70 (275)
T PRK00166          1 MATYAIGDIQGCYDELQRLLEKIDFDPA-----KDTLWLVGDLVNRGPDSLEVLRFVKSLGD-----SAVTVLGNHDLHL   70 (275)
T ss_pred             CcEEEEEccCCCHHHHHHHHHhcCCCCC-----CCEEEEeCCccCCCcCHHHHHHHHHhcCC-----CeEEEecChhHHH
Confidence            6899999999999999999999876432     58999999999999999999999999842     5899999999998


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      +........+                                      .                     ...++.++- 
T Consensus        71 l~~~~g~~~~--------------------------------------~---------------------~~~~l~~~l-   90 (275)
T PRK00166         71 LAVAAGIKRN--------------------------------------K---------------------KKDTLDPIL-   90 (275)
T ss_pred             HHhhcCCccc--------------------------------------c---------------------chhHHHHHH-
Confidence            8764321000                                      0                     022222221 


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHH
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGE  223 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~  223 (255)
                             .....+++++||+++|++++...           .+++|||||+.|..++.+
T Consensus        91 -------~~~~~~~~~~~L~~lPl~~~~~~-----------~~~l~vHAGi~p~~~~~~  131 (275)
T PRK00166         91 -------EAPDRDELLDWLRHQPLLHVDEE-----------LGLVMVHAGIPPQWDLAT  131 (275)
T ss_pred             -------ccccHHHHHHHHHCCCcEEEECC-----------CCEEEEccCCCCCCCHHH
Confidence                   12334679999999999998521           189999999999987644

>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain

Probab=99.91  E-value=2.2e-24  Score=191.62  Aligned_cols=129  Identities=25%  Similarity=0.398  Sum_probs=100.0

Q ss_pred             EEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccchhh
Q 025290            7 VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAA   86 (255)
Q Consensus         7 i~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~   86 (255)
                      ++||||||||+.+|+++|+++++...     .|++||+||+|||||+|.+|+++++++..     ++++|+||||.+++.
T Consensus         1 ~yvIGDIHG~~~~L~~LL~~i~~~~~-----~D~Li~lGDlVdRGp~s~evl~~l~~l~~-----~v~~VlGNHD~~ll~   70 (257)
T cd07422           1 TYAIGDIQGCYDELQRLLEKINFDPA-----KDRLWLVGDLVNRGPDSLETLRFVKSLGD-----SAKTVLGNHDLHLLA   70 (257)
T ss_pred             CEEEECCCCCHHHHHHHHHhcCCCCC-----CCEEEEecCcCCCCcCHHHHHHHHHhcCC-----CeEEEcCCchHHHHH
Confidence            48999999999999999999987532     58999999999999999999999999873     589999999999887


Q ss_pred             hhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCCCc
Q 025290           87 FVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAH  166 (255)
Q Consensus        87 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~~~  166 (255)
                      ......                                      ..++                     ..++.++    
T Consensus        71 ~~~g~~--------------------------------------~~~~---------------------~~t~~~~----   87 (257)
T cd07422          71 VAAGIK--------------------------------------KPKK---------------------KDTLDDI----   87 (257)
T ss_pred             HhcCcc--------------------------------------cccc---------------------HhHHHHH----
Confidence            543200                                      0000                     1222221    


Q ss_pred             ChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHH
Q 025290          167 GSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGE  223 (255)
Q Consensus       167 ~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~  223 (255)
                          +.....+++++||+++|++++.+.           .+++||||||.|..++.+
T Consensus        88 ----l~~~~~~~~~~wLr~lPl~~~~~~-----------~~~l~vHAGi~p~w~~~~  129 (257)
T cd07422          88 ----LNAPDRDELLDWLRHQPLLHRDPE-----------LGILMVHAGIPPQWSIEQ  129 (257)
T ss_pred             ----HhccchHHHHHHHHhCCCEEEECC-----------ccEEEEccCCCCCCCHHH
Confidence                223445789999999999998762           169999999999987644

ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa

>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]

Probab=99.90  E-value=3.5e-24  Score=185.03  Aligned_cols=156  Identities=26%  Similarity=0.419  Sum_probs=118.3

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .++.|+|||||++..|..+++.-+..      +....+|+||+||||-+|++++-+|..++.+||+ ++++||||||...
T Consensus        43 tPvtvcGDIHGQf~Dllelf~igG~~------~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~-ritLiRGNHEsRq  115 (303)
T KOG0372|consen   43 TPVTVCGDIHGQFYDLLELFRIGGDV------PETNYLFLGDYVDRGYYSVETFLLLLALKVRYPD-RITLIRGNHESRQ  115 (303)
T ss_pred             CCcEEeecccchHHHHHHHHHhCCCC------CCCceEeecchhccccchHHHHHHHHHHhhcCcc-eeEEeeccchhhh
Confidence            46899999999999999999875432      3578999999999999999999999999999997 9999999999887


Q ss_pred             hh-hhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290           85 AA-FVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG  163 (255)
Q Consensus        85 ~~-~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~  163 (255)
                      +. .++++                                                                .+++..||
T Consensus       116 itqvYGFY----------------------------------------------------------------~EclrKYG  131 (303)
T KOG0372|consen  116 ITQVYGFY----------------------------------------------------------------DECLRKYG  131 (303)
T ss_pred             hhhhhhHH----------------------------------------------------------------HHHHHHcC
Confidence            74 34442                                                                55566666


Q ss_pred             CCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccC
Q 025290          164 VAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSG  243 (255)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~  243 (255)
                      ..        .+.+-.-+.+.-||+...++.            ++++||||+.|+..--+|...+ .|.-..|  +....
T Consensus       132 ~~--------~vWr~c~eiFdyL~l~aiid~------------kifCVHGGlSP~i~~lDqIr~l-DR~~Eip--h~g~m  188 (303)
T KOG0372|consen  132 SA--------NVWRYCTEIFDYLSLAAIIDG------------KIFCVHGGLSPSIQTLDQIRVL-DRKQEVP--HDGAM  188 (303)
T ss_pred             Ch--------HHHHHHHHHHHhhhHhheecC------------cEEEEcCCCCcchhhHHHHHHh-hccccCC--CCCcc
Confidence            32        222234466777788776662            8999999999999877777754 2222222  23334


Q ss_pred             CccccCCCccc
Q 025290          244 RKNVWDIPEVI  254 (255)
Q Consensus       244 ~~~~w~~~~~~  254 (255)
                      -+.+||||++.
T Consensus       189 ~DllWSDPee~  199 (303)
T KOG0372|consen  189 CDLLWSDPEEG  199 (303)
T ss_pred             hheeccCcccC
Confidence            48899999974

>cd07418 MPP_PP7 PP7, metallophosphatase domain

Probab=99.90  E-value=1.2e-23  Score=194.99  Aligned_cols=77  Identities=30%  Similarity=0.468  Sum_probs=68.5

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .+++|||||||++.+|.++++.++....     ++.+||+||+||||+.|.+++.++..++..+|+ +++++|||||...
T Consensus        66 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~-----~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~-~v~lLRGNHE~~~  139 (377)
T cd07418          66 CEVVVVGDVHGQLHDVLFLLEDAGFPDQ-----NRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPD-RVYLLRGNHESKF  139 (377)
T ss_pred             CCEEEEEecCCCHHHHHHHHHHhCCCCC-----CceEEEeccccCCCCChHHHHHHHHHHhhccCC-eEEEEeeeccccc
Confidence            5799999999999999999998876432     467999999999999999999999999988885 8999999999987


Q ss_pred             hhh
Q 025290           85 AAF   87 (255)
Q Consensus        85 ~~~   87 (255)
                      ++.
T Consensus       140 i~~  142 (377)
T cd07418         140 CTS  142 (377)
T ss_pred             chh
Confidence            653

PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,

>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain

Probab=99.90  E-value=1e-23  Score=192.44  Aligned_cols=77  Identities=29%  Similarity=0.426  Sum_probs=68.8

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .+++|||||||++.+|.++|+..++...     +++++|+||+||||+.|.+|+.++..++..+|+ +++++|||||...
T Consensus        60 ~~~~VvGDIHG~~~dL~~ll~~~g~~~~-----~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~-~v~lLRGNHE~~~  133 (316)
T cd07417          60 EKITVCGDTHGQFYDLLNIFELNGLPSE-----TNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPN-HFHLNRGNHETDN  133 (316)
T ss_pred             ceeEEeecccCCHHHHHHHHHhcCCCCc-----cCeEEEEeeEecCCCChHHHHHHHHHhhhccCC-ceEEEeeccchHH
Confidence            6799999999999999999998876432     478999999999999999999999999988885 7999999999977


Q ss_pred             hhh
Q 025290           85 AAF   87 (255)
Q Consensus        85 ~~~   87 (255)
                      ++.
T Consensus       134 ~~~  136 (316)
T cd07417         134 MNK  136 (316)
T ss_pred             HHH
Confidence            654

Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel

>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain

Probab=99.90  E-value=1.7e-23  Score=187.50  Aligned_cols=154  Identities=25%  Similarity=0.387  Sum_probs=112.8

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      ++++|||||||++.+|.++++..+..      +.++++|+||+||||+.+.+++.+++.++..+|+ +++++|||||...
T Consensus        28 ~~i~vvGDiHG~~~~l~~ll~~~~~~------~~~~~vfLGD~VDrG~~s~e~l~~l~~lk~~~p~-~v~llrGNHE~~~  100 (271)
T smart00156       28 APVTVCGDIHGQFDDLLRLFDLNGPP------PDTNYVFLGDYVDRGPFSIEVILLLFALKILYPN-RVVLLRGNHESRS  100 (271)
T ss_pred             CCEEEEEeCcCCHHHHHHHHHHcCCC------CCceEEEeCCccCCCCChHHHHHHHHHHHhcCCC-CEEEEeccccHHH
Confidence            68999999999999999999988753      3589999999999999999999999999988885 8999999999987


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      ++......                                                               .+....|+ 
T Consensus       101 ~~~~~gf~---------------------------------------------------------------~e~~~~~~-  116 (271)
T smart00156      101 MNEIYGFY---------------------------------------------------------------DECKRKYG-  116 (271)
T ss_pred             HHHhccch---------------------------------------------------------------hhhhhhcC-
Confidence            75322100                                                               11122222 


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR  244 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~  244 (255)
                              ..+.....++++.||++..++.            ++++||||+.|...--++...+ .|....  +....-.
T Consensus       117 --------~~l~~~~~~~f~~LPl~aii~~------------~~~~vHgGi~~~~~~l~~i~~i-~r~~~~--~~~~~~~  173 (271)
T smart00156      117 --------EEIYEKFQEAFSWLPLAALIDN------------KILCMHGGLSPDLTTLDDIRKL-KRPQEP--PDEGLLI  173 (271)
T ss_pred             --------HHHHHHHHHHHhhChhheEEcC------------eEEEEecCCCCccCCHHHHhcc-cCCCCC--Cchhhhh
Confidence                    1334568899999999988762            6999999999886533333322 111111  1222345


Q ss_pred             ccccCCCc
Q 025290          245 KNVWDIPE  252 (255)
Q Consensus       245 ~~~w~~~~  252 (255)
                      +.+||||.
T Consensus       174 dllWsDP~  181 (271)
T smart00156      174 DLLWSDPD  181 (271)
T ss_pred             heeecCCC
Confidence            78999995

Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.

>cd07416 MPP_PP2B PP2B, metallophosphatase domain

Probab=99.90  E-value=1.5e-23  Score=190.61  Aligned_cols=155  Identities=23%  Similarity=0.316  Sum_probs=111.9

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .+++|||||||++.+|.++++..+..      +.++++||||+||||+.|.+++.++..++..+|+ +++++|||||...
T Consensus        43 ~~i~ViGDIHG~~~dL~~l~~~~g~~------~~~~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~-~v~lLRGNHE~~~  115 (305)
T cd07416          43 APVTVCGDIHGQFYDLLKLFEVGGSP------ANTRYLFLGDYVDRGYFSIECVLYLWALKILYPK-TLFLLRGNHECRH  115 (305)
T ss_pred             CCEEEEEeCCCCHHHHHHHHHhcCCC------CCceEEEECCccCCCCChHHHHHHHHHHHhhcCC-CEEEEeCCCcHHH
Confidence            57999999999999999999877543      3589999999999999999999999999999996 8999999999987


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      ++......                                                               .++...|+ 
T Consensus       116 l~~~~gf~---------------------------------------------------------------~e~~~~y~-  131 (305)
T cd07416         116 LTEYFTFK---------------------------------------------------------------QECKIKYS-  131 (305)
T ss_pred             HHHhhCch---------------------------------------------------------------hHHHHhcc-
Confidence            65422100                                                               11111221 


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR  244 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~  244 (255)
                              ..+.....++++.||++..+++            ++++||||+.|...--++...+ .|-...|..  ..-.
T Consensus       132 --------~~l~~~~~~~f~~LPlaaii~~------------~i~~vHGGi~p~~~~l~~i~~i-~r~~~~~~~--~~~~  188 (305)
T cd07416         132 --------ERVYDACMEAFDCLPLAALMNQ------------QFLCVHGGLSPELKTLDDIRKL-DRFREPPAF--GPMC  188 (305)
T ss_pred             --------HHHHHHHHHHHhhccceeEEcC------------CEEEEcCCCCcccccHHHhccc-CCCCCCCCC--Ccce
Confidence                    1223568899999999987762            8999999999886543444332 111111111  1234


Q ss_pred             ccccCCCcc
Q 025290          245 KNVWDIPEV  253 (255)
Q Consensus       245 ~~~w~~~~~  253 (255)
                      +.+||||..
T Consensus       189 dllWsDP~~  197 (305)
T cd07416         189 DLLWSDPLE  197 (305)
T ss_pred             eeeecCccc
Confidence            789999964

PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G

>PTZ00239 serine/threonine protein phosphatase 2A; Provisional

Probab=99.90  E-value=1.4e-23  Score=190.36  Aligned_cols=156  Identities=26%  Similarity=0.429  Sum_probs=114.4

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .+++|||||||++.+|.++++..+..      +.++++|+||+||||+.+.+++.++..++..+|+ +++++|||||...
T Consensus        43 ~~i~vvGDIHG~~~~L~~l~~~~~~~------~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~-~v~llrGNHE~~~  115 (303)
T PTZ00239         43 APVNVCGDIHGQFYDLQALFKEGGDI------PNANYIFIGDFVDRGYNSVETMEYLLCLKVKYPG-NITLLRGNHESRQ  115 (303)
T ss_pred             CCEEEEEeCCCCHHHHHHHHHhcCCC------CCceEEEeeeEcCCCCCHHHHHHHHHHhhhcCCC-cEEEEecccchHH
Confidence            46999999999999999999887643      3579999999999999999999999999998885 8999999999877


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      +.....                         |                                      ..++..+|+.
T Consensus       116 ~~~~~g-------------------------f--------------------------------------~~e~~~ky~~  132 (303)
T PTZ00239        116 CTQVYG-------------------------F--------------------------------------YEEILRKYGN  132 (303)
T ss_pred             HhhhcC-------------------------h--------------------------------------HHHHHHHhcC
Confidence            653221                         0                                      0334444542


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR  244 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~  244 (255)
                      .        .+.....++++.||++..+++            ++++|||||.|...--++...+ .|....|.....  .
T Consensus       133 ~--------~~~~~~~~~f~~LPlaaii~~------------~i~cvHgGi~p~~~~l~~i~~i-~r~~~~~~~~~~--~  189 (303)
T PTZ00239        133 S--------NPWRLFMDVFDCLPLAALIEG------------QILCVHGGLSPDMRTIDQIRTI-DRKIEIPHEGPF--C  189 (303)
T ss_pred             h--------hHHHHHHHHHHhCchheEEcC------------eEEEEcCccCcccccHhhhccc-cCCCCCCCCCCc--e
Confidence            1        123456889999999987662            7999999999886544444432 232222322222  3


Q ss_pred             ccccCCCcc
Q 025290          245 KNVWDIPEV  253 (255)
Q Consensus       245 ~~~w~~~~~  253 (255)
                      +.+||||..
T Consensus       190 dllWsDP~~  198 (303)
T PTZ00239        190 DLMWSDPEE  198 (303)
T ss_pred             eeEecCccc
Confidence            799999963

>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional

Probab=99.90  E-value=1.4e-23  Score=189.87  Aligned_cols=155  Identities=23%  Similarity=0.314  Sum_probs=113.6

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      ..++|||||||++.+|.++++.+++..      .++++|+||+||||+.|.+++.++..++..+|. +++++|||||...
T Consensus        52 ~p~~ViGDIHG~~~~L~~l~~~~~~~~------~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~-~v~llrGNHE~~~  124 (294)
T PTZ00244         52 PPVRVCGDTHGQYYDLLRIFEKCGFPP------YSNYLFLGDYVDRGKHSVETITLQFCYKIVYPE-NFFLLRGNHECAS  124 (294)
T ss_pred             CCceeeccCCCCHHHHHHHHHHcCCCC------cccEEEeeeEecCCCCHHHHHHHHHHHhhccCC-eEEEEecccchHh
Confidence            358999999999999999999887643      468999999999999999999999998888885 8999999999876


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      ++....                         |                                      ..++...|+ 
T Consensus       125 ~~~~~g-------------------------f--------------------------------------~~e~~~~y~-  140 (294)
T PTZ00244        125 INKMYG-------------------------F--------------------------------------FDDVKRRYN-  140 (294)
T ss_pred             HhhccC-------------------------h--------------------------------------HHHHHHHhh-
Confidence            653211                         0                                      022223333 


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR  244 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~  244 (255)
                              ..+...+.++++.||++..+++            ++++||||+.|....-++...+. |-...+  ....-.
T Consensus       141 --------~~l~~~~~~~f~~lPlaaii~~------------~il~vHgGi~p~~~~l~~i~~i~-rp~~~~--~~~~~~  197 (294)
T PTZ00244        141 --------IKLFKAFTDVFNTMPVCCVISE------------KIICMHGGLSPDLTSLASVNEIE-RPCDVP--DRGILC  197 (294)
T ss_pred             --------HHHHHHHHHHHHhCchheEecC------------eeEEEcCCCCchhhHHHHhhhhc-cccCCC--ccchhh
Confidence                    2334678999999999987762            79999999999876444444321 211122  222235


Q ss_pred             ccccCCCcc
Q 025290          245 KNVWDIPEV  253 (255)
Q Consensus       245 ~~~w~~~~~  253 (255)
                      +.+||||..
T Consensus       198 dllWsDP~~  206 (294)
T PTZ00244        198 DLLWADPED  206 (294)
T ss_pred             eeeecCccc
Confidence            789999974

>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain

Probab=99.90  E-value=1.5e-23  Score=188.93  Aligned_cols=156  Identities=24%  Similarity=0.364  Sum_probs=114.8

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .+++|||||||++.+|.++++..++.      +.++++|+||+||||+.+.+++.++..++..+|+ +++++|||||...
T Consensus        42 ~~i~vvGDIHG~~~dL~~ll~~~~~~------~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~-~v~llrGNHE~~~  114 (285)
T cd07415          42 SPVTVCGDIHGQFYDLLELFRVGGDP------PDTNYLFLGDYVDRGYYSVETFLLLLALKVRYPD-RITLLRGNHESRQ  114 (285)
T ss_pred             CCEEEEEeCCCCHHHHHHHHHHcCCC------CCCeEEEEeEECCCCcCHHHHHHHHHHHhhcCCC-cEEEEecccchHh
Confidence            46999999999999999999887653      2478999999999999999999999999988885 8999999999876


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      +.....                                           -                    ..++..+|+.
T Consensus       115 ~~~~yg-------------------------------------------f--------------------~~e~~~~y~~  131 (285)
T cd07415         115 ITQVYG-------------------------------------------F--------------------YDECLRKYGN  131 (285)
T ss_pred             hhhhcc-------------------------------------------h--------------------hHHHHHhcCc
Confidence            653211                                           0                    0334444442


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR  244 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~  244 (255)
                              ..+.....++++.||++..++.            ++++|||||.|...-.+|...+ .|-...+...  .-.
T Consensus       132 --------~~l~~~~~~~f~~lPlaaii~~------------~i~cvHgGi~p~~~~~~~i~~i-~r~~~~~~~~--~~~  188 (285)
T cd07415         132 --------ANVWKYCTDLFDYLPLAALIDN------------QIFCVHGGLSPSIDTLDQIRAI-DRFQEVPHEG--PMC  188 (285)
T ss_pred             --------hHHHHHHHHHHHHhHHHhEeCC------------eEEEEcCCCCCCcccHHHhhcc-cCCCCCCCCC--Ccc
Confidence                    1233567889999999977662            7999999999987755555533 1211222211  234


Q ss_pred             ccccCCCcc
Q 025290          245 KNVWDIPEV  253 (255)
Q Consensus       245 ~~~w~~~~~  253 (255)
                      +.+||||..
T Consensus       189 dllWsDP~~  197 (285)
T cd07415         189 DLLWSDPDD  197 (285)
T ss_pred             ceEecCCCc
Confidence            689999974

PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2

>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain

Probab=99.89  E-value=2.2e-23  Score=188.59  Aligned_cols=155  Identities=25%  Similarity=0.334  Sum_probs=113.5

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .+++|||||||++.+|.++++..++..      .++++|+||+||||+.+.+++.++..++..+|+ +++++|||||...
T Consensus        50 ~~i~viGDIHG~~~~L~~l~~~~~~~~------~~~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~-~i~llrGNHE~~~  122 (293)
T cd07414          50 APLKICGDIHGQYYDLLRLFEYGGFPP------ESNYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECAS  122 (293)
T ss_pred             CceEEEEecCCCHHHHHHHHHhcCCCC------cceEEEEeeEecCCCCcHHHHHHHHHhhhhCCC-cEEEEecccchhh
Confidence            479999999999999999999887643      478999999999999999999999999999996 8999999999987


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      ++......                                                               .++...|+ 
T Consensus       123 ~~~~~gf~---------------------------------------------------------------~e~~~~y~-  138 (293)
T cd07414         123 INRIYGFY---------------------------------------------------------------DECKRRYN-  138 (293)
T ss_pred             Hhhhcchh---------------------------------------------------------------hHHHHhhh-
Confidence            76432100                                                               11111222 


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR  244 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~  244 (255)
                              ..+......+++.||++..++.            ++++||||+.|...--++...+ .|....|..  ..-.
T Consensus       139 --------~~l~~~~~~~f~~lPlaa~i~~------------~i~cvHgGi~p~~~~l~~i~~i-~r~~~~~~~--~~~~  195 (293)
T cd07414         139 --------IKLWKTFTDCFNCLPVAAIIDE------------KIFCMHGGLSPDLQSMEQIRRI-MRPTDVPDQ--GLLC  195 (293)
T ss_pred             --------HHHHHHHHHHHHHhHHHHhhCC------------cEEEEccCCCcccCcHHHHhcc-cCCCCCCch--hhHh
Confidence                    1233567889999999987662            7899999999987654554433 121122221  2234


Q ss_pred             ccccCCCcc
Q 025290          245 KNVWDIPEV  253 (255)
Q Consensus       245 ~~~w~~~~~  253 (255)
                      +.+||||..
T Consensus       196 dllWsDP~~  204 (293)
T cd07414         196 DLLWSDPDK  204 (293)
T ss_pred             hhhccCccc
Confidence            789999974

PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg

>PTZ00480 serine/threonine-protein phosphatase; Provisional

Probab=99.89  E-value=4.8e-23  Score=187.84  Aligned_cols=155  Identities=25%  Similarity=0.346  Sum_probs=113.2

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .+++|||||||++.+|.++++..++..      .+.++|+||+||||+.+.+++.++..++..+|+ +++++|||||...
T Consensus        59 ~~i~vvGDIHG~~~dL~~l~~~~g~~~------~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~-~v~llRGNHE~~~  131 (320)
T PTZ00480         59 APLKICGDVHGQYFDLLRLFEYGGYPP------ESNYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECAS  131 (320)
T ss_pred             CCeEEEeecccCHHHHHHHHHhcCCCC------cceEEEeceecCCCCCcHHHHHHHHHhcccCCC-ceEEEecccchhh
Confidence            479999999999999999998876643      478999999999999999999999999999985 8999999999877


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      ++.....                         .                                      .+....|+ 
T Consensus       132 ~~~~ygF-------------------------~--------------------------------------~e~~~~y~-  147 (320)
T PTZ00480        132 INRIYGF-------------------------Y--------------------------------------DECKRRYT-  147 (320)
T ss_pred             hhhhcch-------------------------H--------------------------------------HHHHhhcC-
Confidence            6532210                         0                                      11111222 


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR  244 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~  244 (255)
                              ..+.......+..||++..+++            ++++|||||.|....-++...+ .|....|..  ..-.
T Consensus       148 --------~~l~~~~~~~F~~LPlaAiI~~------------~i~cvHGGI~p~~~~l~~i~~i-~rp~~~~~~--~~~~  204 (320)
T PTZ00480        148 --------IKLWKTFTDCFNCLPVAALIDE------------KILCMHGGLSPELSNLEQIRRI-MRPTDVPDT--GLLC  204 (320)
T ss_pred             --------HHHHHHHHHHHHhccHhheecC------------cEEEEcCCcCcccCCHHHHhcc-cCCCCCCcc--chhh
Confidence                    1223457788899999977663            8999999999987654554432 122222222  2234


Q ss_pred             ccccCCCcc
Q 025290          245 KNVWDIPEV  253 (255)
Q Consensus       245 ~~~w~~~~~  253 (255)
                      +.+||||..
T Consensus       205 dllWSDP~~  213 (320)
T PTZ00480        205 DLLWSDPDK  213 (320)
T ss_pred             heeecCccc
Confidence            789999974

>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain

Probab=99.89  E-value=9e-23  Score=186.11  Aligned_cols=83  Identities=33%  Similarity=0.572  Sum_probs=69.4

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccC--CCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIG--PSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~--~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      .+++||||||||+.+|.++++.++....  .++..+.++||+||+|||||.|.+|+.++..++..+|+ ++++||||||.
T Consensus        48 ~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~-~v~lLRGNHE~  126 (311)
T cd07419          48 APIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPN-QIHLIRGNHED  126 (311)
T ss_pred             CCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChHHHHHHHHHhhhcCCC-cEEEeccccch
Confidence            4689999999999999999998865321  01111357999999999999999999999999988885 89999999999


Q ss_pred             chhhhh
Q 025290           83 GFAAFV   88 (255)
Q Consensus        83 ~~~~~~   88 (255)
                      +.++..
T Consensus       127 ~~l~~~  132 (311)
T cd07419         127 RDINAL  132 (311)
T ss_pred             HHHHHH
Confidence            888753

Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most

>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]

Probab=99.89  E-value=1.5e-23  Score=178.89  Aligned_cols=155  Identities=28%  Similarity=0.462  Sum_probs=118.8

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .++.|+|||||++..|.++++.-+..+      ....||+||+||||-.|.++..+++-|+.+||+ ++.++|||||...
T Consensus        46 tPVTvCGDIHGQFyDL~eLFrtgG~vP------~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~-~ITLlRGNHEsRq  118 (306)
T KOG0373|consen   46 TPVTVCGDIHGQFYDLLELFRTGGQVP------DTNYIFMGDFVDRGYYSLETFTLLLLLKARYPA-KITLLRGNHESRQ  118 (306)
T ss_pred             CCeeEeeccchhHHHHHHHHHhcCCCC------CcceEEeccccccccccHHHHHHHHHHhhcCCc-eeEEeeccchhhh
Confidence            468999999999999999998866543      478999999999999999999999999999996 8999999999887


Q ss_pred             h-hhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290           85 A-AFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG  163 (255)
Q Consensus        85 ~-~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~  163 (255)
                      + +.+++++++......+.+||                                                          
T Consensus       119 itqVYGFydECq~KYGnan~wk----------------------------------------------------------  140 (306)
T KOG0373|consen  119 ITQVYGFYDECQNKYGNANVWK----------------------------------------------------------  140 (306)
T ss_pred             hhhhhhhHHHHHhhcCCchHHH----------------------------------------------------------
Confidence            7 45665433322222222221                                                          


Q ss_pred             CCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccC
Q 025290          164 VAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSG  243 (255)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~  243 (255)
                                    ---+.+.-|++...++.            ++++||||+.|+...-+|...+ .|.-..|...+.+ 
T Consensus       141 --------------ycckVFD~LtlaAiID~------------~vLCVHGGLSPdirtlDqir~i-~R~qEiPh~G~fc-  192 (306)
T KOG0373|consen  141 --------------YCCKVFDFLTLAAIIDE------------KVLCVHGGLSPDIRTLDQIRLI-ERNQEIPHEGPFC-  192 (306)
T ss_pred             --------------HHHHHHhhhhHHHHhcC------------cEEEEcCCCCccceeHHHHHhH-HhhccCCCCCCcc-
Confidence                          22344555566655552            8999999999999888888865 5666666666665 


Q ss_pred             CccccCCCcc
Q 025290          244 RKNVWDIPEV  253 (255)
Q Consensus       244 ~~~~w~~~~~  253 (255)
                       +.+||||+.
T Consensus       193 -DlmWSDPed  201 (306)
T KOG0373|consen  193 -DLMWSDPED  201 (306)
T ss_pred             -ceeccChhh
Confidence             889999985

>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain

Probab=99.87  E-value=9.4e-22  Score=169.95  Aligned_cols=135  Identities=30%  Similarity=0.539  Sum_probs=100.3

Q ss_pred             EEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccchhhh
Q 025290            8 CCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAF   87 (255)
Q Consensus         8 ~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~~   87 (255)
                      +|||||||++.+|.++|+.++..      +.+++|++||+|||||.+.++++++.++... | .++++|+||||.+++..
T Consensus         1 ~~igDiHg~~~~l~~~l~~~~~~------~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~-~~~~~l~GNHe~~~~~~   72 (225)
T cd00144           1 YVIGDIHGCLDDLLRLLEKIGFP------PNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-P-DNVILLRGNHEDMLLNF   72 (225)
T ss_pred             CEEeCCCCCHHHHHHHHHHhCCC------CCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-C-CcEEEEccCchhhhhhh
Confidence            58999999999999999998763      2589999999999999999999999998765 4 37999999999998876


Q ss_pred             hcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCCCcC
Q 025290           88 VGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHG  167 (255)
Q Consensus        88 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~~~~  167 (255)
                      .......                   ..|.               ++                     ..+...      
T Consensus        73 ~~~~~~~-------------------~~~~---------------~~---------------------~~~~~~------   91 (225)
T cd00144          73 LYGFYDE-------------------DEWI---------------GG---------------------TLRLLK------   91 (225)
T ss_pred             hcCCcch-------------------hhcc---------------ch---------------------hHHHHH------
Confidence            5431100                   0010               00                     111111      


Q ss_pred             hHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHH
Q 025290          168 SADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQ  224 (255)
Q Consensus       168 ~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q  224 (255)
                        .....+.+.+..|+.+||+.+.++.           ++++|||||+.|..+...+
T Consensus        92 --~~~~~~~~~~~~~~~~lp~~~~~~~-----------~~~~~vHag~~~~~~~~~~  135 (225)
T cd00144          92 --KLGEDLWEEFNDVFFYLPLAALIET-----------KKVLCVHGGLSPGLPLEEQ  135 (225)
T ss_pred             --hhCHHHHHHHHHHHHhCcHheEeCC-----------CeEEEEeCCCCCccchHHh
Confidence              1123445678899999999988871           2799999999999876644

The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate

>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional

Probab=99.86  E-value=2.4e-21  Score=168.44  Aligned_cols=74  Identities=27%  Similarity=0.409  Sum_probs=64.8

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      ..|++||||||||+.+|+++|+.+.+..     ..|++|++||+|||||.|.++++++.+.       ++++|+||||.+
T Consensus        14 ~~ri~visDiHg~~~~l~~~l~~~~~~~-----~~d~l~~lGD~vdrG~~~~~~l~~l~~~-------~~~~v~GNHE~~   81 (218)
T PRK09968         14 YRHIWVVGDIHGEYQLLQSRLHQLSFCP-----ETDLLISVGDNIDRGPESLNVLRLLNQP-------WFISVKGNHEAM   81 (218)
T ss_pred             CCeEEEEEeccCCHHHHHHHHHhcCCCC-----CCCEEEECCCCcCCCcCHHHHHHHHhhC-------CcEEEECchHHH
Confidence            3599999999999999999999986543     2589999999999999999999999752       478999999999


Q ss_pred             hhhhhc
Q 025290           84 FAAFVG   89 (255)
Q Consensus        84 ~~~~~~   89 (255)
                      +++++.
T Consensus        82 ~~~~~~   87 (218)
T PRK09968         82 ALDAFE   87 (218)
T ss_pred             HHHHHh
Confidence            998764

>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain

Probab=99.86  E-value=1.9e-21  Score=167.94  Aligned_cols=80  Identities=30%  Similarity=0.417  Sum_probs=64.8

Q ss_pred             EEEccCCCCHHHHHHHHHHhhhccCCCC--CCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCC--CCcEEEECCCcccc
Q 025290            8 CCIGDVHGYISKLQNLWKNLETHIGPSD--FNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYP--NQKHVFLSGNHDLG   83 (255)
Q Consensus         8 ~vigDIHG~~~~l~~lL~~~~~~~~~~~--~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p--~~~v~~i~GNHE~~   83 (255)
                      +|||||||++.+|+++|+.+++......  ...+.+|++||+|||||.+.+|+++++++..+++  +.++++|+||||.+
T Consensus         1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~   80 (208)
T cd07425           1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM   80 (208)
T ss_pred             CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence            5899999999999999998875321111  1368999999999999999999999999864321  24799999999999


Q ss_pred             hhhh
Q 025290           84 FAAF   87 (255)
Q Consensus        84 ~~~~   87 (255)
                      ++..
T Consensus        81 ~l~~   84 (208)
T cd07425          81 NLCG   84 (208)
T ss_pred             HHcc
Confidence            8863

This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal

>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]

Probab=99.85  E-value=1.7e-21  Score=169.47  Aligned_cols=162  Identities=28%  Similarity=0.521  Sum_probs=132.7

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      ...+.|+|||||+++.|.+++ +++...     +....+|+||+||||++|.+++.++..++.+||+ +|.++|||||..
T Consensus        59 ~~pvtvcGDvHGqf~dl~ELf-kiGG~~-----pdtnylfmGDyvdrGy~SvetVS~lva~Kvry~~-rvtilrGNHEsr  131 (319)
T KOG0371|consen   59 NCPVTVCGDVHGQFHDLIELF-KIGGLA-----PDTNYLFMGDYVDRGYYSVETVSLLVALKVRYPD-RVTILRGNHESR  131 (319)
T ss_pred             ccceEEecCcchhHHHHHHHH-HccCCC-----CCcceeeeeeecccccchHHHHHHHHHhhccccc-eeEEecCchHHH
Confidence            346899999999999999999 455443     3578999999999999999999999999999996 999999999986


Q ss_pred             hhh-hhcCCCC---------------------------------------------------------CCCCCccccccc
Q 025290           84 FAA-FVGVLPE---------------------------------------------------------PGGGLGFKEGWK  105 (255)
Q Consensus        84 ~~~-~~~~~~~---------------------------------------------------------~~~~~~~~~~w~  105 (255)
                      .+. .++++++                                                         |.++.+++.+| 
T Consensus       132 qitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLw-  210 (319)
T KOG0371|consen  132 QITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLW-  210 (319)
T ss_pred             HHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheec-
Confidence            653 3332111                                                         77888888888 


Q ss_pred             ccccchhhcccc---cCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCCCcChHHHHhcCCHHHHHH
Q 025290          106 QYEQNEEREGWF---KGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKF  182 (255)
Q Consensus       106 ~~~~~~~~~~w~---~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~~~~~~~~~~~~~~~~~~~  182 (255)
                        +++.++-.|-   ++.||        .+|.+++.+||.++++++.                          .++|...
T Consensus       211 --sdpddr~gwg~sprgag~--------tfg~di~~~fn~~n~lsli--------------------------sRahqlv  254 (319)
T KOG0371|consen  211 --SDPDDRCGWGISPRGAGY--------TFGQDISEQFNHKNGLSLI--------------------------SRAHQLV  254 (319)
T ss_pred             --cCcccCCCCCCCCCCCCc--------ccchhhHHHhhccCCchHh--------------------------HHHHHHH
Confidence              7788888885   66666        6888888889888876533                          5688999


Q ss_pred             HhcCcceEEecCeeeecCCCc-cccCeE
Q 025290          183 LADMLWVHEEDEVCVETNDGI-KHCKLI  209 (255)
Q Consensus       183 l~~LP~~~~~~~~~~~~~~~~-~~~~~~  209 (255)
                      ++...++.+-+.++++|++|+ ++|+..
T Consensus       255 m~g~nW~~~~~~vtiFSapnycYrcgn~  282 (319)
T KOG0371|consen  255 MEGYNWYHLWNVVTIFSAPNYCYRCGNQ  282 (319)
T ss_pred             hcccceeeecceeEEccCCchhhccccH
Confidence            999999999999999999987 666654

>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain

Probab=99.84  E-value=7.8e-21  Score=163.58  Aligned_cols=73  Identities=26%  Similarity=0.373  Sum_probs=63.3

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      +||++||||||++.+|+++++.+++..     ..|.+|++||++|+||.+.++++++.+.       ++++|+||||.++
T Consensus         1 ~ri~~isDiHg~~~~l~~~l~~~~~~~-----~~d~~~~~GD~v~~g~~~~~~~~~l~~~-------~~~~v~GNhe~~~   68 (207)
T cd07424           1 GRDFVVGDIHGHYSLLQKALDAVGFDP-----ARDRLISVGDLIDRGPESLACLELLLEP-------WFHAVRGNHEQMA   68 (207)
T ss_pred             CCEEEEECCCCCHHHHHHHHHHcCCCC-----CCCEEEEeCCcccCCCCHHHHHHHHhcC-------CEEEeECCChHHH
Confidence            589999999999999999999886532     2489999999999999999999999761       5899999999998


Q ss_pred             hhhhc
Q 025290           85 AAFVG   89 (255)
Q Consensus        85 ~~~~~   89 (255)
                      +..+.
T Consensus        69 ~~~~~   73 (207)
T cd07424          69 IDALR   73 (207)
T ss_pred             HhHhh
Confidence            87653

PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all

>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]

Probab=99.82  E-value=9.5e-21  Score=173.41  Aligned_cols=154  Identities=28%  Similarity=0.412  Sum_probs=114.8

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhh-hccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLE-THIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~-~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      -+|.|+|||||++..|.+++...+ +.      +...++|||||||||+.|++++-++..++.+||+ +++.+|||||.+
T Consensus        59 aPV~i~GDiHGq~~DLlrlf~~~g~~p------p~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~-~~~lLRGNHE~~  131 (331)
T KOG0374|consen   59 APVKIVGDIHGQFGDLLRLFDLLGSFP------PDQNYVFLGDYVDRGKQSLETICLLFALKIKYPE-NVFLLRGNHECA  131 (331)
T ss_pred             CCEEEEccCcCCHHHHHHHHHhcCCCC------CcccEEEecccccCCccceEEeehhhhhhhhCCc-eEEEeccccccc
Confidence            479999999999999999999987 54      3589999999999999999999999999999996 999999999998


Q ss_pred             hhhh-hcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhc
Q 025290           84 FAAF-VGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESY  162 (255)
Q Consensus        84 ~~~~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy  162 (255)
                      .++. ++++++                                ..  |+|++                            
T Consensus       132 ~in~~yGFydE--------------------------------~~--rr~~~----------------------------  149 (331)
T KOG0374|consen  132 SINRIYGFYDE--------------------------------CK--RRYGE----------------------------  149 (331)
T ss_pred             cccceeeeHHH--------------------------------HH--Hhcch----------------------------
Confidence            7763 222100                                00  22221                            


Q ss_pred             CCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHH-hhhccCCCCchhhc
Q 025290          163 GVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLEL-LKAKDTRVPKVEAL  241 (255)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~-~~~r~~~~~~~~~~  241 (255)
                                ..+......-+..||++..+..            +++++|||+.|...-.+|... .+.  +..|...  
T Consensus       150 ----------~~~w~~F~~~f~~mp~~a~i~~------------kI~CmhGGlsp~l~~~~~i~~i~rp--~~~~~~g--  203 (331)
T KOG0374|consen  150 ----------IKLWKAFNDAFNCLPLAALIDG------------KILCMHGGLSPHLKSLDQIRAIPRP--TDSPDKG--  203 (331)
T ss_pred             ----------HHHHHHHHHHHhhCchhheecc------------eEEEecCCCChhhcChHHHhhccCC--cCCCccc--
Confidence                      0112356778999999887763            999999999999775555553 222  2333322  


Q ss_pred             cCCccccCCCcc
Q 025290          242 SGRKNVWDIPEV  253 (255)
Q Consensus       242 ~~~~~~w~~~~~  253 (255)
                      .--+.+|+||+.
T Consensus       204 ll~DLlWsdp~~  215 (331)
T KOG0374|consen  204 LLCDLLWSDPDD  215 (331)
T ss_pred             eeeeeeecCCCC
Confidence            334778999974

>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]

Probab=99.79  E-value=1.3e-19  Score=164.02  Aligned_cols=154  Identities=23%  Similarity=0.325  Sum_probs=115.4

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      ..|.|+|||||++..|.+|++.= ..+     ...+.+||||+||||..|++|+-+|..|+..||+ ...++|||||...
T Consensus        88 APiTVCGDIHGQf~DLmKLFEVG-G~P-----A~t~YLFLGDYVDRGyFSiECvlYLwsLKi~yp~-tl~lLRGNHECrH  160 (517)
T KOG0375|consen   88 APITVCGDIHGQFFDLMKLFEVG-GSP-----ANTRYLFLGDYVDRGYFSIECVLYLWSLKINYPK-TLFLLRGNHECRH  160 (517)
T ss_pred             CCeeEecccchHHHHHHHHHHcc-CCc-----ccceeEeeccccccceeeeehHHHHHHHhcCCCC-eEEEecCCcchhh
Confidence            47899999999999999999863 322     3689999999999999999999999999999996 8899999999987


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      +.-+...                                                               .+++...|. 
T Consensus       161 LT~YFTF---------------------------------------------------------------KqEc~iKYs-  176 (517)
T KOG0375|consen  161 LTEYFTF---------------------------------------------------------------KQECKIKYS-  176 (517)
T ss_pred             hHhHhhH---------------------------------------------------------------HHHHhHhcc-
Confidence            7533210                                                               034444444 


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCC-ChHHHHHHhhhccCCCCchhhccC
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGK-KVGEQLELLKAKDTRVPKVEALSG  243 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~-~l~~q~~~~~~r~~~~~~~~~~~~  243 (255)
                              .++..+-.+-+..||++...+            +.+++||||+.|.. ++++-..+-+.+++  |..-.  .
T Consensus       177 --------e~vYdaCmesFd~LPLAAlmN------------qQflCVHGGlSPEi~tl~DIr~l~RF~Ep--Pa~Gp--m  232 (517)
T KOG0375|consen  177 --------ERVYDACMESFDCLPLAALMN------------QQFLCVHGGLSPEIHTLDDIRKLDRFKEP--PAFGP--M  232 (517)
T ss_pred             --------HHHHHHHHHHhccchHHHHhc------------CceEEecCCCCcccccHHHHHhhhhccCC--CccCc--c
Confidence                    344556777788899986655            28999999999996 46665555444433  22222  3


Q ss_pred             CccccCCCcc
Q 025290          244 RKNVWDIPEV  253 (255)
Q Consensus       244 ~~~~w~~~~~  253 (255)
                      =+.+|+||-+
T Consensus       233 CDLLWsDPlE  242 (517)
T KOG0375|consen  233 CDLLWSDPLE  242 (517)
T ss_pred             hhhhccChhh
Confidence            4789999965

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=99.60  E-value=6.7e-17  Score=149.50  Aligned_cols=77  Identities=30%  Similarity=0.447  Sum_probs=67.0

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      ..+.|+||+||.++.|.-+|-+-+....     ....||.||+||||..|+|||-.+..+...+|+ .+++-|||||..+
T Consensus       165 ~qVTiCGDLHGklDDL~~I~yKNGlPS~-----~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~-~~~LNRGNHED~m  238 (631)
T KOG0377|consen  165 QQVTICGDLHGKLDDLLVILYKNGLPSS-----SNPYVFNGDFVDRGKRSIEVLMILFALYLVYPN-AVHLNRGNHEDHM  238 (631)
T ss_pred             cceEEeccccccccceEEEEecCCCCCC-----CCCeeecCchhhccccchhhHHHHHHHHhcCch-hhhccCCchHHHH
Confidence            4689999999999999888766655433     467999999999999999999999999888995 7899999999998


Q ss_pred             hhh
Q 025290           85 AAF   87 (255)
Q Consensus        85 ~~~   87 (255)
                      ++.
T Consensus       239 mNl  241 (631)
T KOG0377|consen  239 MNL  241 (631)
T ss_pred             HHH
Confidence            875

>PRK09453 phosphodiesterase; Provisional

Probab=99.32  E-value=5.5e-12  Score=106.29  Aligned_cols=70  Identities=20%  Similarity=0.342  Sum_probs=58.0

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC--------hHHHHHHHHhCCCCCCCCcEEEE
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN--------TREVIDFLISLPTKYPNQKHVFL   76 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~--------s~~vl~~l~~l~~~~p~~~v~~i   76 (255)
                      ||+++|||+||+..+++++++.+....      .|.+|++||++++|+.        +.++++.+.++..     ++++|
T Consensus         1 mri~viSD~Hg~~~~~~~~l~~~~~~~------~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~v~~V   69 (182)
T PRK09453          1 MKLMFASDTHGSLPATEKALELFAQSG------ADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYAD-----KIIAV   69 (182)
T ss_pred             CeEEEEEeccCCHHHHHHHHHHHHhcC------CCEEEEcccccccCcCCCCccccCHHHHHHHHHhcCC-----ceEEE
Confidence            689999999999999999998885543      4899999999998873        5678888877642     58999


Q ss_pred             CCCcccchh
Q 025290           77 SGNHDLGFA   85 (255)
Q Consensus        77 ~GNHE~~~~   85 (255)
                      +||||..+.
T Consensus        70 ~GNhD~~~~   78 (182)
T PRK09453         70 RGNCDSEVD   78 (182)
T ss_pred             ccCCcchhh
Confidence            999997653

>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]

Probab=99.17  E-value=4e-11  Score=112.97  Aligned_cols=155  Identities=23%  Similarity=0.294  Sum_probs=113.2

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      ..++.++||+||++..+.++++..+....     ....+|.||++|||..+.++...+...+..+|+ ++++.|||||.-
T Consensus       213 d~~~sv~gd~hGqfydl~nif~l~g~Ps~-----t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn-~~fl~rgn~Es~  286 (476)
T KOG0376|consen  213 DVKISVCGDTHGQFYDLLNIFELNGLPSE-----TNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPN-NFFLLRGNHESD  286 (476)
T ss_pred             CceEEecCCccccccchhhhHhhcCCCCC-----cccccccCceeeecccceeeeeeehhhcccCCc-ceeeccCCccch
Confidence            46899999999999999999998876543     567999999999999999999999999999996 899999999976


Q ss_pred             hh-hhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhc
Q 025290           84 FA-AFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESY  162 (255)
Q Consensus        84 ~~-~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy  162 (255)
                      .+ ..+++..++..                                                           ..|.   
T Consensus       287 ~m~~iy~f~~e~~~-----------------------------------------------------------kyte---  304 (476)
T KOG0376|consen  287 NMNKIYGFEGEVKA-----------------------------------------------------------KYTE---  304 (476)
T ss_pred             HHHHHhCCCcchhh-----------------------------------------------------------hhHH---
Confidence            55 44554222210                                                           1111   


Q ss_pred             CCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccC--CCChHHHHHHhhhccCCCCchhh
Q 025290          163 GVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLER--GKKVGEQLELLKAKDTRVPKVEA  240 (255)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p--~~~l~~q~~~~~~r~~~~~~~~~  240 (255)
                                 +...-.-+-+..||+...++.            +++.+|||+..  +.++.+...+.+.    --+++.
T Consensus       305 -----------~~~~~f~~~f~~LPl~~~i~~------------~~~~~hgglf~~~~v~l~d~r~i~r~----~~~~~~  357 (476)
T KOG0376|consen  305 -----------EMFNLFSEVFIWLPLAHLINN------------KVLVMHGGLFSPDGVTLEDFRNIDRF----EQPPEE  357 (476)
T ss_pred             -----------HHHHhhhhhhccccchhhhcC------------ceEEEecCcCCCCCccHHHHHhhhhc----cCCccc
Confidence                       111111256778898877763            89999999973  3466666665322    223466


Q ss_pred             ccCCccccCCCcc
Q 025290          241 LSGRKNVWDIPEV  253 (255)
Q Consensus       241 ~~~~~~~w~~~~~  253 (255)
                      ......+|++|+.
T Consensus       358 ~~~~~~lws~pq~  370 (476)
T KOG0376|consen  358 GLMCELLWSDPQP  370 (476)
T ss_pred             ccccccccCCCcc
Confidence            6777889999986

>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain

Probab=99.14  E-value=1.4e-10  Score=101.45  Aligned_cols=77  Identities=14%  Similarity=0.238  Sum_probs=60.4

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      +.+||++||||||+..+++++++.+....      .|.+|++||++++++...++.+++..+....  ..+++|+||||.
T Consensus         3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~------~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~--~pv~~V~GNhD~   74 (224)
T cd07388           3 TVRYVLATSNPKGDLEALEKLVGLAPETG------ADAIVLIGNLLPKAAKSEDYAAFFRILGEAH--LPTFYVPGPQDA   74 (224)
T ss_pred             ceeEEEEEEecCCCHHHHHHHHHHHhhcC------CCEEEECCCCCCCCCCHHHHHHHHHHHHhcC--CceEEEcCCCCh
Confidence            46899999999999999999998775443      3899999999999976766666666654331  148999999997


Q ss_pred             chhhh
Q 025290           83 GFAAF   87 (255)
Q Consensus        83 ~~~~~   87 (255)
                      .+...
T Consensus        75 ~v~~~   79 (224)
T cd07388          75 PLWEY   79 (224)
T ss_pred             HHHHH
Confidence            64443

This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,

>TIGR00040 yfcE phosphoesterase, MJ0936 family

Probab=99.00  E-value=9.1e-10  Score=90.52  Aligned_cols=65  Identities=22%  Similarity=0.268  Sum_probs=52.2

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      ||+++|||+||+..+++.+++.+....     ..|.++++||++     +.++++.+.++..     ++++|+||||...
T Consensus         1 m~i~viSD~H~~~~~~~~~~~~~~~~~-----~~d~ii~~GD~~-----~~~~~~~l~~~~~-----~~~~V~GN~D~~~   65 (158)
T TIGR00040         1 MKILVISDTHGPLRATELPVELFNLES-----NVDLVIHAGDLT-----SPFVLKEFEDLAA-----KVIAVRGNNDGER   65 (158)
T ss_pred             CEEEEEecccCCcchhHhHHHHHhhcc-----CCCEEEEcCCCC-----CHHHHHHHHHhCC-----ceEEEccCCCchh
Confidence            689999999999988888777776541     148999999998     4678888876642     4899999999854

Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.

>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11

Probab=98.98  E-value=1.4e-09  Score=85.87  Aligned_cols=74  Identities=30%  Similarity=0.343  Sum_probs=51.3

Q ss_pred             CeEEEEccCCCCHHHH----HHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHH----HhCCCCCCCCcEEEE
Q 025290            5 RRVCCIGDVHGYISKL----QNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFL----ISLPTKYPNQKHVFL   76 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l----~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l----~~l~~~~p~~~v~~i   76 (255)
                      |||++|||+|+.....    ..+.+.....      ..+.+|++||+++++..+.......    ......   ..++++
T Consensus         1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~------~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~   71 (200)
T PF00149_consen    1 MRILVISDLHGGYDDDSDAFRKLDEIAAEN------KPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPK---IPVYFI   71 (200)
T ss_dssp             EEEEEEEBBTTTHHHHCHHHHHHHHHHHHT------TTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTT---TTEEEE
T ss_pred             CeEEEEcCCCCCCcchhHHHHHHHHHhccC------CCCEEEeeccccccccccccchhhhccchhhhhcc---cccccc
Confidence            6899999999998877    3333333332      2489999999999998876655432    111111   269999


Q ss_pred             CCCcccchhhh
Q 025290           77 SGNHDLGFAAF   87 (255)
Q Consensus        77 ~GNHE~~~~~~   87 (255)
                      +||||......
T Consensus        72 ~GNHD~~~~~~   82 (200)
T PF00149_consen   72 LGNHDYYSGNS   82 (200)
T ss_dssp             E-TTSSHHHHH
T ss_pred             ccccccceecc
Confidence            99999886543

The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....

>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily []

Probab=98.94  E-value=1.5e-09  Score=87.65  Aligned_cols=61  Identities=28%  Similarity=0.530  Sum_probs=47.6

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      |||+++||+|++..++.++++.++.        .+.+|++||+++    ..++++.+.+.       ++++|+||||...
T Consensus         1 Mki~~~sD~H~~~~~~~~~~~~~~~--------~d~vi~~GDi~~----~~~~~~~~~~~-------~~~~v~GNHD~~~   61 (156)
T PF12850_consen    1 MKIAVISDLHGNLDALEAVLEYINE--------PDFVIILGDIFD----PEEVLELLRDI-------PVYVVRGNHDNWA   61 (156)
T ss_dssp             EEEEEEE--TTTHHHHHHHHHHHTT--------ESEEEEES-SCS----HHHHHHHHHHH-------EEEEE--CCHSTH
T ss_pred             CEEEEEeCCCCChhHHHHHHHHhcC--------CCEEEECCCchh----HHHHHHHHhcC-------CEEEEeCCccccc
Confidence            7999999999999999999998821        389999999998    48888888776       3899999999655

; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....

>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain

Probab=98.92  E-value=2.2e-09  Score=87.53  Aligned_cols=60  Identities=27%  Similarity=0.376  Sum_probs=48.6

Q ss_pred             eEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            6 RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         6 ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      |++++||+||+...+.++++.+..        .|.+|++||++++++.+.     +   ...   ..+++|+||||...
T Consensus         1 ~i~~isD~H~~~~~~~~~~~~~~~--------~d~ii~~GD~~~~~~~~~-----~---~~~---~~~~~V~GNhD~~~   60 (155)
T cd00841           1 KIGVISDTHGSLELLEKALELFGD--------VDLIIHAGDVLYPGPLNE-----L---ELK---APVIAVRGNCDGEV   60 (155)
T ss_pred             CEEEEecCCCCHHHHHHHHHHhcC--------CCEEEECCccccccccch-----h---hcC---CcEEEEeCCCCCcC
Confidence            689999999999999999998753        289999999999988655     1   111   25899999999764

YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph

>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain

Probab=98.80  E-value=1.7e-08  Score=86.77  Aligned_cols=72  Identities=19%  Similarity=0.281  Sum_probs=55.8

Q ss_pred             CCeEEEEccCCCCHH----HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH-HHHHHHHhCCCCCCCCcEEEECC
Q 025290            4 PRRVCCIGDVHGYIS----KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR-EVIDFLISLPTKYPNQKHVFLSG   78 (255)
Q Consensus         4 ~~ri~vigDIHG~~~----~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~-~vl~~l~~l~~~~p~~~v~~i~G   78 (255)
                      ++|++++||+|....    .++++++.+....      .|.++++||++|.+.... .+.+++..+....   .++++.|
T Consensus         1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~------~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~---~v~~v~G   71 (223)
T cd07385           1 GLRIAHLSDLHLGPFVSRERLERLVEKINALK------PDLVVLTGDLVDGSVDVLELLLELLKKLKAPL---GVYAVLG   71 (223)
T ss_pred             CCEEEEEeecCCCccCCHHHHHHHHHHHhccC------CCEEEEcCcccCCcchhhHHHHHHHhccCCCC---CEEEECC
Confidence            479999999998743    6778887776543      389999999999887664 6777777765443   4899999


Q ss_pred             Ccccch
Q 025290           79 NHDLGF   84 (255)
Q Consensus        79 NHE~~~   84 (255)
                      |||...
T Consensus        72 NHD~~~   77 (223)
T cd07385          72 NHDYYS   77 (223)
T ss_pred             Cccccc
Confidence            999753

YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia

>PRK11340 phosphodiesterase YaeI; Provisional

Probab=98.79  E-value=2e-08  Score=90.01  Aligned_cols=71  Identities=23%  Similarity=0.211  Sum_probs=54.0

Q ss_pred             CCeEEEEccCCCC----HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC--CChHHHHHHHHhCCCCCCCCcEEEEC
Q 025290            4 PRRVCCIGDVHGY----ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG--PNTREVIDFLISLPTKYPNQKHVFLS   77 (255)
Q Consensus         4 ~~ri~vigDIHG~----~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG--~~s~~vl~~l~~l~~~~p~~~v~~i~   77 (255)
                      ++||+++||+|..    ...++++++.+....      .|.++++||++|.+  ....++.+.+..+....   .+++|.
T Consensus        49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~------pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~---pv~~V~  119 (271)
T PRK11340         49 PFKILFLADLHYSRFVPLSLISDAIALGIEQK------PDLILLGGDYVLFDMPLNFSAFSDVLSPLAECA---PTFACF  119 (271)
T ss_pred             CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcC------CCEEEEccCcCCCCccccHHHHHHHHHHHhhcC---CEEEec
Confidence            5899999999976    556777887776543      38999999999943  23345667777776544   499999


Q ss_pred             CCcccc
Q 025290           78 GNHDLG   83 (255)
Q Consensus        78 GNHE~~   83 (255)
                      ||||..
T Consensus       120 GNHD~~  125 (271)
T PRK11340        120 GNHDRP  125 (271)
T ss_pred             CCCCcc
Confidence            999974

>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain

Probab=98.75  E-value=2e-08  Score=83.52  Aligned_cols=65  Identities=25%  Similarity=0.405  Sum_probs=46.9

Q ss_pred             EEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-hHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            7 VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-TREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         7 i~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      |+++|||||+...+.+  ..+...      ..|.+|++||+++++.. ..+.++.+.++..     .+++|+||||...
T Consensus         1 i~~~sD~H~~~~~~~~--~~~~~~------~~D~vv~~GDl~~~~~~~~~~~~~~l~~~~~-----p~~~v~GNHD~~~   66 (188)
T cd07392           1 ILAISDIHGDVEKLEA--IILKAE------EADAVIVAGDITNFGGKEAAVEINLLLAIGV-----PVLAVPGNCDTPE   66 (188)
T ss_pred             CEEEEecCCCHHHHHH--HHhhcc------CCCEEEECCCccCcCCHHHHHHHHHHHhcCC-----CEEEEcCCCCCHH
Confidence            5789999999988876  333222      24899999999999875 3344455554432     5899999999754

PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina

>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain

Probab=98.68  E-value=3e-08  Score=79.40  Aligned_cols=62  Identities=32%  Similarity=0.657  Sum_probs=44.3

Q ss_pred             eEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH--HHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            6 RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR--EVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         6 ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~--~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      ||++|||+||+..    .   +...      ..|.+|++||+++++....  .+++++.++...    .+++|+||||..
T Consensus         1 ~i~~isD~H~~~~----~---~~~~------~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~GNHD~~   63 (135)
T cd07379           1 RFVCISDTHSRHR----T---ISIP------DGDVLIHAGDLTERGTLEELQKFLDWLKSLPHP----HKIVIAGNHDLT   63 (135)
T ss_pred             CEEEEeCCCCCCC----c---CcCC------CCCEEEECCCCCCCCCHHHHHHHHHHHHhCCCC----eEEEEECCCCCc
Confidence            5899999999976    1   1111      2489999999999876432  467777766431    357899999965


Q ss_pred             h
Q 025290           84 F   84 (255)
Q Consensus        84 ~   84 (255)
                      .
T Consensus        64 ~   64 (135)
T cd07379          64 L   64 (135)
T ss_pred             C
Confidence            3

239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme

>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain

Probab=98.68  E-value=5.3e-08  Score=85.79  Aligned_cols=65  Identities=28%  Similarity=0.526  Sum_probs=47.5

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .||++||||||+.....  .+.+....      .|.++++||+++   .+.++++.+.++..     .+++|+||||.+.
T Consensus         1 ~rIa~isDiHg~~~~~~--~~~l~~~~------pD~Vl~~GDi~~---~~~~~~~~l~~l~~-----p~~~V~GNHD~~~   64 (238)
T cd07397           1 LRIAIVGDVHGQWDLED--IKALHLLQ------PDLVLFVGDFGN---ESVQLVRAISSLPL-----PKAVILGNHDAWY   64 (238)
T ss_pred             CEEEEEecCCCCchHHH--HHHHhccC------CCEEEECCCCCc---ChHHHHHHHHhCCC-----CeEEEcCCCcccc
Confidence            37999999999976532  12232222      389999999986   45778888877642     4899999999865


Q ss_pred             h
Q 025290           85 A   85 (255)
Q Consensus        85 ~   85 (255)
                      .
T Consensus        65 ~   65 (238)
T cd07397          65 D   65 (238)
T ss_pred             c
Confidence            4

DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy

>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional

Probab=98.66  E-value=3.1e-08  Score=87.14  Aligned_cols=75  Identities=21%  Similarity=0.274  Sum_probs=48.7

Q ss_pred             CeEEEEccCCCCH---HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-------CChHHHHHHHHhCCCCCCCCcEE
Q 025290            5 RRVCCIGDVHGYI---SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-------PNTREVIDFLISLPTKYPNQKHV   74 (255)
Q Consensus         5 ~ri~vigDIHG~~---~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-------~~s~~vl~~l~~l~~~~p~~~v~   74 (255)
                      ||+++|||+|...   ....++++.+.....    ..|.++++||++|..       +...++++.+.++...  +..++
T Consensus         1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~----~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~--g~~v~   74 (241)
T PRK05340          1 MPTLFISDLHLSPERPAITAAFLRFLRGEAR----QADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS--GVPCY   74 (241)
T ss_pred             CcEEEEeecCCCCCChhHHHHHHHHHHhhhc----cCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc--CCeEE
Confidence            6899999999542   222233333322111    248999999999862       2245677777777543  12599


Q ss_pred             EECCCcccchh
Q 025290           75 FLSGNHDLGFA   85 (255)
Q Consensus        75 ~i~GNHE~~~~   85 (255)
                      +|.||||..+.
T Consensus        75 ~v~GNHD~~~~   85 (241)
T PRK05340         75 FMHGNRDFLLG   85 (241)
T ss_pred             EEeCCCchhhh
Confidence            99999997544

>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain

Probab=98.57  E-value=4.9e-08  Score=80.60  Aligned_cols=67  Identities=16%  Similarity=0.197  Sum_probs=45.3

Q ss_pred             EEEEccCCCCHHHHHHHHH-HhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            7 VCCIGDVHGYISKLQNLWK-NLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         7 i~vigDIHG~~~~l~~lL~-~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      +.++||+|++.......+. .+...      ..|.++++||+++.+.....+. ++......   ..+++|+||||..
T Consensus         1 ~~~iSDlH~~~~~~~~~~~~~~~~~------~~d~li~~GDi~~~~~~~~~~~-~~~~~~~~---~~v~~v~GNHD~~   68 (166)
T cd07404           1 IQYLSDLHLEFEDNLADLLNFPIAP------DADILVLAGDIGYLTDAPRFAP-LLLALKGF---EPVIYVPGNHEFY   68 (166)
T ss_pred             CceEccccccCccccccccccCCCC------CCCEEEECCCCCCCcchHHHHH-HHHhhcCC---ccEEEeCCCcceE
Confidence            4689999999876665542 12111      3589999999999887654443 22222222   2599999999986

MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t

>TIGR03729 acc_ester putative phosphoesterase

Probab=98.57  E-value=1.7e-07  Score=82.19  Aligned_cols=68  Identities=24%  Similarity=0.284  Sum_probs=50.6

Q ss_pred             eEEEEccCCCCH------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCC
Q 025290            6 RVCCIGDVHGYI------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGN   79 (255)
Q Consensus         6 ri~vigDIHG~~------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GN   79 (255)
                      ||++|||+|.+.      ..+.++++.+....      .|.+|++||+++..+.+.++++.+.++. ..   .+++|+||
T Consensus         1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~------~d~vv~~GDl~~~~~~~~~~~~~l~~~~-~~---pv~~v~GN   70 (239)
T TIGR03729         1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQK------IDHLHIAGDISNDFQRSLPFIEKLQELK-GI---KVTFNAGN   70 (239)
T ss_pred             CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcC------CCEEEECCccccchhhHHHHHHHHHHhc-CC---cEEEECCC
Confidence            689999999653      23667777775443      4899999999998766667777666542 12   58999999


Q ss_pred             cccc
Q 025290           80 HDLG   83 (255)
Q Consensus        80 HE~~   83 (255)
                      ||..
T Consensus        71 HD~~   74 (239)
T TIGR03729        71 HDML   74 (239)
T ss_pred             CCCC
Confidence            9964

Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.

>TIGR00619 sbcd exonuclease SbcD

Probab=98.40  E-value=9.4e-07  Score=78.54  Aligned_cols=72  Identities=26%  Similarity=0.345  Sum_probs=48.9

Q ss_pred             CeEEEEccCC-CC-----------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHH----HHHHHHhCCCCC
Q 025290            5 RRVCCIGDVH-GY-----------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTRE----VIDFLISLPTKY   68 (255)
Q Consensus         5 ~ri~vigDIH-G~-----------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~----vl~~l~~l~~~~   68 (255)
                      ||++.+||+| |.           ...|..+++.+....      .|.++++||++|+...+..    ..+++..+....
T Consensus         1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~------~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~   74 (253)
T TIGR00619         1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQ------IDALLVAGDVFDTANPPAEAQELFNAFFRNLSDAN   74 (253)
T ss_pred             CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcC------CCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence            7899999999 32           234566666665433      4899999999998754432    234555554432


Q ss_pred             CCCcEEEECCCcccc
Q 025290           69 PNQKHVFLSGNHDLG   83 (255)
Q Consensus        69 p~~~v~~i~GNHE~~   83 (255)
                      | ..+++|.||||..
T Consensus        75 ~-i~v~~i~GNHD~~   88 (253)
T TIGR00619        75 P-IPIVVISGNHDSA   88 (253)
T ss_pred             C-ceEEEEccCCCCh
Confidence            1 2589999999974

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain

Probab=98.37  E-value=1.2e-06  Score=76.02  Aligned_cols=69  Identities=23%  Similarity=0.401  Sum_probs=49.3

Q ss_pred             eEEEEccCCCC------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--HHHHHHHHhCCCCCCCC
Q 025290            6 RVCCIGDVHGY------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--REVIDFLISLPTKYPNQ   71 (255)
Q Consensus         6 ri~vigDIHG~------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--~~vl~~l~~l~~~~p~~   71 (255)
                      |+++|||+|=.            ...++++++.+.....    ..+.+|++||+++.+...  ..+++.+.++..     
T Consensus         1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~----~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~~~-----   71 (240)
T cd07402           1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHP----RPDLVLVTGDLTDDGSPESYERLRELLAALPI-----   71 (240)
T ss_pred             CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCC----CCCEEEECccCCCCCCHHHHHHHHHHHhhcCC-----
Confidence            68999999933            3467888887765421    248999999999986532  345555555532     


Q ss_pred             cEEEECCCcccc
Q 025290           72 KHVFLSGNHDLG   83 (255)
Q Consensus        72 ~v~~i~GNHE~~   83 (255)
                      .+++|+||||..
T Consensus        72 p~~~v~GNHD~~   83 (240)
T cd07402          72 PVYLLPGNHDDR   83 (240)
T ss_pred             CEEEeCCCCCCH
Confidence            589999999974

GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa

>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain

Probab=98.35  E-value=1.6e-06  Score=77.44  Aligned_cols=69  Identities=25%  Similarity=0.309  Sum_probs=48.9

Q ss_pred             eEEEEccCC-CC------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-h----HHHHHHHHhCCCC
Q 025290            6 RVCCIGDVH-GY------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-T----REVIDFLISLPTK   67 (255)
Q Consensus         6 ri~vigDIH-G~------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s----~~vl~~l~~l~~~   67 (255)
                      |+++|||+| +.            ...++++++.+....      .|.+|++||+++.+.. +    .++.+.+..+.. 
T Consensus         2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~------~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~-   74 (267)
T cd07396           2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRES------LDFVVQLGDIIDGDNARAEEALDAVLAILDRLKG-   74 (267)
T ss_pred             eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCC------CCEEEECCCeecCCCchHHHHHHHHHHHHHhcCC-
Confidence            799999999 21            456777888876543      3899999999988863 2    223444444432 


Q ss_pred             CCCCcEEEECCCcccchh
Q 025290           68 YPNQKHVFLSGNHDLGFA   85 (255)
Q Consensus        68 ~p~~~v~~i~GNHE~~~~   85 (255)
                          .+++++||||....
T Consensus        75 ----p~~~v~GNHD~~~~   88 (267)
T cd07396          75 ----PVHHVLGNHDLYNP   88 (267)
T ss_pred             ----CEEEecCccccccc
Confidence                59999999997543

Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.

>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional

Probab=98.34  E-value=1.4e-06  Score=78.02  Aligned_cols=70  Identities=21%  Similarity=0.316  Sum_probs=49.6

Q ss_pred             CCeEEEEccCC-C-----------CHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-h-HHHHHHHHhCCCCCC
Q 025290            4 PRRVCCIGDVH-G-----------YISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-T-REVIDFLISLPTKYP   69 (255)
Q Consensus         4 ~~ri~vigDIH-G-----------~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s-~~vl~~l~~l~~~~p   69 (255)
                      ++|++.|||+| .           ....|+++++.+.....    ..|.+|++||+++.+.. . ..+.+.+.++..   
T Consensus        14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~----~~D~vvitGDl~~~~~~~~~~~~~~~l~~l~~---   86 (275)
T PRK11148         14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQH----EFDLIVATGDLAQDHSSEAYQHFAEGIAPLRK---   86 (275)
T ss_pred             CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCC----CCCEEEECCCCCCCCCHHHHHHHHHHHhhcCC---
Confidence            58999999999 1           14668888888765422    24899999999998742 1 233444444432   


Q ss_pred             CCcEEEECCCccc
Q 025290           70 NQKHVFLSGNHDL   82 (255)
Q Consensus        70 ~~~v~~i~GNHE~   82 (255)
                        .+++|+||||.
T Consensus        87 --Pv~~v~GNHD~   97 (275)
T PRK11148         87 --PCVWLPGNHDF   97 (275)
T ss_pred             --cEEEeCCCCCC
Confidence              59999999996

>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain

Probab=98.31  E-value=2e-06  Score=71.54  Aligned_cols=70  Identities=23%  Similarity=0.386  Sum_probs=48.1

Q ss_pred             EEEEccCCCCHHH---------------HHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCC
Q 025290            7 VCCIGDVHGYISK---------------LQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQ   71 (255)
Q Consensus         7 i~vigDIHG~~~~---------------l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~   71 (255)
                      +++|||+|=....               ..++++.+.....    +.|.+|++||+++++..+.. ++++.++..     
T Consensus         1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~d~vi~~GDl~~~~~~~~~-~~~l~~~~~-----   70 (168)
T cd07390           1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVG----PDDTVYHLGDFSFGGKAGTE-LELLSRLNG-----   70 (168)
T ss_pred             CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcC----CCCEEEEeCCCCCCCChHHH-HHHHHhCCC-----
Confidence            3799999944332               2345555554322    35899999999999886544 666666542     


Q ss_pred             cEEEECCCcccchhh
Q 025290           72 KHVFLSGNHDLGFAA   86 (255)
Q Consensus        72 ~v~~i~GNHE~~~~~   86 (255)
                      .+++|+||||.....
T Consensus        71 ~~~~v~GNHD~~~~~   85 (168)
T cd07390          71 RKHLIKGNHDSSLER   85 (168)
T ss_pred             CeEEEeCCCCchhhh
Confidence            589999999976553

This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d

>PHA02546 47 endonuclease subunit; Provisional

Probab=98.31  E-value=9.5e-07  Score=81.77  Aligned_cols=71  Identities=27%  Similarity=0.355  Sum_probs=47.4

Q ss_pred             CeEEEEccCC-CC-----------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-CChHHHHHHHHh-----CCC
Q 025290            5 RRVCCIGDVH-GY-----------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-PNTREVIDFLIS-----LPT   66 (255)
Q Consensus         5 ~ri~vigDIH-G~-----------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-~~s~~vl~~l~~-----l~~   66 (255)
                      ||++.+||+| |.           ...|.++++.+....      .|.++++||++|.. +.+.+++.++.+     +..
T Consensus         1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~------vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~   74 (340)
T PHA02546          1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHG------ITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKE   74 (340)
T ss_pred             CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcC------CCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            7999999999 42           244556666665443      38999999999985 344444443332     221


Q ss_pred             CCCCCcEEEECCCcccc
Q 025290           67 KYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        67 ~~p~~~v~~i~GNHE~~   83 (255)
                      .  +..+++|.||||..
T Consensus        75 ~--gi~v~~I~GNHD~~   89 (340)
T PHA02546         75 A--GITLHVLVGNHDMY   89 (340)
T ss_pred             C--CCeEEEEccCCCcc
Confidence            1  23699999999974

>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase

Probab=98.30  E-value=1.1e-06  Score=76.96  Aligned_cols=72  Identities=18%  Similarity=0.198  Sum_probs=45.5

Q ss_pred             EEEEccCCCCH---HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCC-----C--hHHHHHHHHhCCCCCCCCcEEEE
Q 025290            7 VCCIGDVHGYI---SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGP-----N--TREVIDFLISLPTKYPNQKHVFL   76 (255)
Q Consensus         7 i~vigDIHG~~---~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~-----~--s~~vl~~l~~l~~~~p~~~v~~i   76 (255)
                      +++|||+|...   ...+.+++.+.....    ..|.+|++||++|...     .  ..++.+.+..+....  ..+++|
T Consensus         1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~----~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~--~~v~~v   74 (231)
T TIGR01854         1 TLFISDLHLSPERPDITALFLDFLREEAR----KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQG--VPCYFM   74 (231)
T ss_pred             CeEEEecCCCCCChhHHHHHHHHHHhhhc----cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCC--CeEEEE
Confidence            37899999543   233444554433211    1489999999999531     1  235566666665431  269999


Q ss_pred             CCCcccch
Q 025290           77 SGNHDLGF   84 (255)
Q Consensus        77 ~GNHE~~~   84 (255)
                      .||||...
T Consensus        75 ~GNHD~~~   82 (231)
T TIGR01854        75 HGNRDFLI   82 (231)
T ss_pred             cCCCchhh
Confidence            99999754

This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.

>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain

Probab=98.30  E-value=1.8e-06  Score=66.18  Aligned_cols=66  Identities=27%  Similarity=0.476  Sum_probs=44.4

Q ss_pred             EEEccCCCCHHHHHHHH--HHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHH-HHhCCCCCCCCcEEEECCCcc
Q 025290            8 CCIGDVHGYISKLQNLW--KNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF-LISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         8 ~vigDIHG~~~~l~~lL--~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~-l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      +++||+|+.........  ......      ..+.+|++||+++.+......... +..+...  ...++++.||||
T Consensus         1 ~~~gD~h~~~~~~~~~~~~~~~~~~------~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~GNHD   69 (131)
T cd00838           1 AVISDIHGNLEALEAVLEAALAAAE------KPDFVLVLGDLVGDGPDPEEVLAAALALLLLL--GIPVYVVPGNHD   69 (131)
T ss_pred             CeeecccCCccchHHHHHHHHhccc------CCCEEEECCcccCCCCCchHHHHHHHHHhhcC--CCCEEEeCCCce
Confidence            47999999988887754  222221      358999999999988776544332 2222211  125999999999

Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me

>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain

Probab=98.27  E-value=2.4e-06  Score=72.07  Aligned_cols=62  Identities=24%  Similarity=0.408  Sum_probs=43.4

Q ss_pred             eEEEEccCC-CCHH-HH-HHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            6 RVCCIGDVH-GYIS-KL-QNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         6 ri~vigDIH-G~~~-~l-~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      +|.||||+| |... .+ ..+++.++..      ..|.+|.+||+++     .++++++.++..     ++++|+||||.
T Consensus         1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~------~~d~iih~GDi~~-----~~~~~~l~~~~~-----~~~~V~GN~D~   64 (178)
T cd07394           1 LVLVIGDLHIPHRASDLPAKFKKLLVPG------KIQHVLCTGNLCS-----KETYDYLKTIAP-----DVHIVRGDFDE   64 (178)
T ss_pred             CEEEEEecCCCCCchhhHHHHHHHhccC------CCCEEEECCCCCC-----HHHHHHHHhhCC-----ceEEEECCCCc
Confidence            589999999 5432 12 2344444322      2489999999986     778888877642     48999999997


Q ss_pred             c
Q 025290           83 G   83 (255)
Q Consensus        83 ~   83 (255)
                      .
T Consensus        65 ~   65 (178)
T cd07394          65 N   65 (178)
T ss_pred             c
Confidence            5

Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl

>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain

Probab=98.24  E-value=3e-06  Score=68.01  Aligned_cols=68  Identities=25%  Similarity=0.475  Sum_probs=44.4

Q ss_pred             EEEEccCCCCHH------H----HHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--HHHHHHHHhCCCCCCCCcEE
Q 025290            7 VCCIGDVHGYIS------K----LQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--REVIDFLISLPTKYPNQKHV   74 (255)
Q Consensus         7 i~vigDIHG~~~------~----l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--~~vl~~l~~l~~~~p~~~v~   74 (255)
                      |+.|||+|=...      .    |.++++.+...      ..|.++++||+++.+...  ....+++..+....  ..++
T Consensus         1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~------~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~--~~~~   72 (144)
T cd07400           1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKAL------DPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL--EPVL   72 (144)
T ss_pred             CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhcc------CCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC--CcEE
Confidence            578999992211      1    12244444333      248999999999987642  34556677766532  1589


Q ss_pred             EECCCccc
Q 025290           75 FLSGNHDL   82 (255)
Q Consensus        75 ~i~GNHE~   82 (255)
                      +|+||||.
T Consensus        73 ~v~GNHD~   80 (144)
T cd07400          73 VVPGNHDV   80 (144)
T ss_pred             EeCCCCeE
Confidence            99999998

YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv

>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain

Probab=98.23  E-value=2.6e-06  Score=71.08  Aligned_cols=73  Identities=25%  Similarity=0.374  Sum_probs=43.3

Q ss_pred             EEEccCC-CCH----------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-HHHHHH--HHhCCCC
Q 025290            8 CCIGDVH-GYI----------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-REVIDF--LISLPTK   67 (255)
Q Consensus         8 ~vigDIH-G~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-~~vl~~--l~~l~~~   67 (255)
                      ++|||+| |.-                +.++++++.+....      .+.+|++||+++....+ .+....  +..+...
T Consensus         1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~------~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~   74 (172)
T cd07391           1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYG------PERLIILGDLKHSFGGLSRQEFEEVAFLRLLAK   74 (172)
T ss_pred             CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcC------CCEEEEeCcccccccccCHHHHHHHHHHHhccC
Confidence            3799999 322                23445555554432      38999999999865432 222221  1222211


Q ss_pred             CCCCcEEEECCCcccchhhhh
Q 025290           68 YPNQKHVFLSGNHDLGFAAFV   88 (255)
Q Consensus        68 ~p~~~v~~i~GNHE~~~~~~~   88 (255)
                        +.++++|+||||..+...+
T Consensus        75 --~~~v~~i~GNHD~~~~~~~   93 (172)
T cd07391          75 --DVDVILIRGNHDGGLPEIL   93 (172)
T ss_pred             --CCeEEEEcccCccchhhhh
Confidence              2369999999998766543

This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro

>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain

Probab=98.21  E-value=2.1e-06  Score=73.36  Aligned_cols=72  Identities=19%  Similarity=0.242  Sum_probs=48.9

Q ss_pred             eEEEEccCC-CCH--------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH----HHHHHHHhCCC
Q 025290            6 RVCCIGDVH-GYI--------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR----EVIDFLISLPT   66 (255)
Q Consensus         6 ri~vigDIH-G~~--------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~----~vl~~l~~l~~   66 (255)
                      |++.+||+| |..              ..|.++++.+....      .|.++++||+++....+.    .+.+.+.++..
T Consensus         1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~   74 (223)
T cd00840           1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEK------VDFVLIAGDLFDSNNPSPEALELLIEALRRLKE   74 (223)
T ss_pred             CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcC------CCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH
Confidence            689999999 322              24666777665543      389999999999876443    34555555531


Q ss_pred             CCCCCcEEEECCCcccchh
Q 025290           67 KYPNQKHVFLSGNHDLGFA   85 (255)
Q Consensus        67 ~~p~~~v~~i~GNHE~~~~   85 (255)
                        ++..++++.||||....
T Consensus        75 --~~~~v~~~~GNHD~~~~   91 (223)
T cd00840          75 --AGIPVFIIAGNHDSPSR   91 (223)
T ss_pred             --CCCCEEEecCCCCCccc
Confidence              11258999999997543

Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi

>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]

Probab=98.16  E-value=6.9e-06  Score=71.32  Aligned_cols=72  Identities=19%  Similarity=0.287  Sum_probs=55.1

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcC--CCCCChHHHH----HHHHhCCCCCCCCcEEEE
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYC--DRGPNTREVI----DFLISLPTKYPNQKHVFL   76 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlv--DrG~~s~~vl----~~l~~l~~~~p~~~v~~i   76 (255)
                      ++||+.+++|+||..+.+.+++..+....      .|.+|+.||+.  +.|+.-....    +.+.....     .++++
T Consensus         2 ~~mkil~vtDlHg~~~~~~k~~~~~~~~~------~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~~~-----~v~av   70 (226)
T COG2129           2 KKMKILAVTDLHGSEDSLKKLLNAAADIR------ADLLVIAGDLTYFHFGPKEVAEELNKLEALKELGI-----PVLAV   70 (226)
T ss_pred             CcceEEEEeccccchHHHHHHHHHHhhcc------CCEEEEecceehhhcCchHHHHhhhHHHHHHhcCC-----eEEEE
Confidence            57899999999999999999998876432      48999999999  8887543322    34443332     69999


Q ss_pred             CCCcccchh
Q 025290           77 SGNHDLGFA   85 (255)
Q Consensus        77 ~GNHE~~~~   85 (255)
                      +||.|...+
T Consensus        71 pGNcD~~~v   79 (226)
T COG2129          71 PGNCDPPEV   79 (226)
T ss_pred             cCCCChHHH
Confidence            999996544

>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain

Probab=98.14  E-value=6.9e-06  Score=71.91  Aligned_cols=67  Identities=22%  Similarity=0.369  Sum_probs=43.6

Q ss_pred             EEEEccCCCC--------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC--hHHHHHHHHhCCCCCCC
Q 025290            7 VCCIGDVHGY--------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN--TREVIDFLISLPTKYPN   70 (255)
Q Consensus         7 i~vigDIHG~--------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~--s~~vl~~l~~l~~~~p~   70 (255)
                      |++++|+|-.              .+.++++.+.++...+    ..|.+|++||++++++.  ..+.++++.++..    
T Consensus         1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~----~~D~viiaGDl~~~~~~~~~~~~l~~l~~l~~----   72 (232)
T cd07393           1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVA----PEDIVLIPGDISWAMKLEEAKLDLAWIDALPG----   72 (232)
T ss_pred             CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCC----CCCEEEEcCCCccCCChHHHHHHHHHHHhCCC----
Confidence            5899999955              1233344444333221    34999999999987653  2355566665432    


Q ss_pred             CcEEEECCCccc
Q 025290           71 QKHVFLSGNHDL   82 (255)
Q Consensus        71 ~~v~~i~GNHE~   82 (255)
                       .+++|+||||.
T Consensus        73 -~v~~V~GNHD~   83 (232)
T cd07393          73 -TKVLLKGNHDY   83 (232)
T ss_pred             -CeEEEeCCccc
Confidence             48999999997

DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat

>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain

Probab=98.12  E-value=3.9e-06  Score=67.01  Aligned_cols=57  Identities=21%  Similarity=0.375  Sum_probs=40.4

Q ss_pred             EEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            8 CCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         8 ~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      .||||+||....+.++....  .      ..|.++++||+.      .++++.+.++..    ..+++|+||||.
T Consensus         1 ~viSDtH~~~~~~~~~~~~~--~------~~d~ii~~GD~~------~~~~~~~~~~~~----~~~~~V~GN~D~   57 (129)
T cd07403           1 LVISDTESPALYSPEIKVRL--E------GVDLILSAGDLP------KEYLEYLVTMLN----VPVYYVHGNHDV   57 (129)
T ss_pred             CeeccccCccccchHHHhhC--C------CCCEEEECCCCC------hHHHHHHHHHcC----CCEEEEeCCCcc
Confidence            48999999977777765541  1      248999999974      344566666521    148899999993

TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.

>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]

Probab=98.11  E-value=1.3e-05  Score=65.98  Aligned_cols=71  Identities=21%  Similarity=0.312  Sum_probs=51.5

Q ss_pred             CCeEEEEccCC------------CCHHHHHH-HHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCC
Q 025290            4 PRRVCCIGDVH------------GYISKLQN-LWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPN   70 (255)
Q Consensus         4 ~~ri~vigDIH------------G~~~~l~~-lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~   70 (255)
                      +..+++|||+|            .+.+.+.+ +|..+.....    +.|.+++|||+.-.--...+..+++..|.     
T Consensus         3 m~mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~----p~D~lwhLGDl~~~~n~~~~a~~IlerLn-----   73 (186)
T COG4186           3 MTMMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVG----PDDVLWHLGDLSSGANRERAAGLILERLN-----   73 (186)
T ss_pred             eeEEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCC----ccceEEEecccccccchhhHHHHHHHHcC-----
Confidence            34689999999            45555544 5566654433    57999999999875555667777777775     


Q ss_pred             CcEEEECCCcccc
Q 025290           71 QKHVFLSGNHDLG   83 (255)
Q Consensus        71 ~~v~~i~GNHE~~   83 (255)
                      +++++|+||||-.
T Consensus        74 Grkhlv~GNhDk~   86 (186)
T COG4186          74 GRKHLVPGNHDKC   86 (186)
T ss_pred             CcEEEeeCCCCCC
Confidence            3689999999954

>PRK10966 exonuclease subunit SbcD; Provisional

Probab=98.09  E-value=7.4e-06  Score=77.70  Aligned_cols=71  Identities=30%  Similarity=0.420  Sum_probs=45.7

Q ss_pred             CeEEEEccCC-CCH-------HH----HHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHH---H-HHHHHhCCCCC
Q 025290            5 RRVCCIGDVH-GYI-------SK----LQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTRE---V-IDFLISLPTKY   68 (255)
Q Consensus         5 ~ri~vigDIH-G~~-------~~----l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~---v-l~~l~~l~~~~   68 (255)
                      ||++.+||+| |..       ..    +..+++.+....      .|.+|++||++|++..+..   . .+++..+... 
T Consensus         1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~------~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-   73 (407)
T PRK10966          1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQ------VDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-   73 (407)
T ss_pred             CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcC------CCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-
Confidence            6899999999 321       11    334555554433      4899999999998754432   2 2344444432 


Q ss_pred             CCCcEEEECCCcccc
Q 025290           69 PNQKHVFLSGNHDLG   83 (255)
Q Consensus        69 p~~~v~~i~GNHE~~   83 (255)
                       +..+++|.||||..
T Consensus        74 -~~~v~~I~GNHD~~   87 (407)
T PRK10966         74 -GCQLVVLAGNHDSV   87 (407)
T ss_pred             -CCcEEEEcCCCCCh
Confidence             12599999999964

>TIGR00583 mre11 DNA repair protein (mre11)

Probab=98.09  E-value=1e-05  Score=76.72  Aligned_cols=50  Identities=14%  Similarity=0.188  Sum_probs=39.5

Q ss_pred             CCCeEEEEccCCCC------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHH
Q 025290            3 RPRRVCCIGDVHGY------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVI   58 (255)
Q Consensus         3 ~~~ri~vigDIHG~------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl   58 (255)
                      ..|||+++||+|-.            +.+|.++++.+....      .|.+++.||++|+..-|.+++
T Consensus         2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~------vD~VLiaGDLFd~~~Ps~~~~   63 (405)
T TIGR00583         2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQD------VDMILLGGDLFHENKPSRKSL   63 (405)
T ss_pred             CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcC------CCEEEECCccCCCCCCCHHHH
Confidence            35899999999933            457788888886554      399999999999987776554

All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.

>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain

Probab=98.09  E-value=8.5e-06  Score=70.50  Aligned_cols=68  Identities=26%  Similarity=0.347  Sum_probs=43.8

Q ss_pred             eEEEEccCCCC----HHHH----HHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH---HHHHHHHhCC-CCCCCCcE
Q 025290            6 RVCCIGDVHGY----ISKL----QNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR---EVIDFLISLP-TKYPNQKH   73 (255)
Q Consensus         6 ri~vigDIHG~----~~~l----~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~---~vl~~l~~l~-~~~p~~~v   73 (255)
                      +++++||+|-.    ...+    ..+++.+....      .+.+|++||+++.+....   ...+.+..+. ...   .+
T Consensus         2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~------~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~---p~   72 (214)
T cd07399           2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALN------IAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGI---PY   72 (214)
T ss_pred             EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcC------CCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCC---cE
Confidence            78999999942    2333    33444443322      389999999999887432   3334444443 223   48


Q ss_pred             EEECCCccc
Q 025290           74 VFLSGNHDL   82 (255)
Q Consensus        74 ~~i~GNHE~   82 (255)
                      ++++||||.
T Consensus        73 ~~~~GNHD~   81 (214)
T cd07399          73 SVLAGNHDL   81 (214)
T ss_pred             EEECCCCcc
Confidence            899999994

YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for

>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related

Probab=98.08  E-value=1.2e-05  Score=70.33  Aligned_cols=73  Identities=19%  Similarity=0.292  Sum_probs=45.3

Q ss_pred             CeEEEEccCC-CCHHHHH------------HHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC---hHHHHHHHHhCCCCC
Q 025290            5 RRVCCIGDVH-GYISKLQ------------NLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN---TREVIDFLISLPTKY   68 (255)
Q Consensus         5 ~ri~vigDIH-G~~~~l~------------~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~---s~~vl~~l~~l~~~~   68 (255)
                      .++++|||+| |....+.            +.|+.+.....  ....+.+|++||+.+....   ..++.+++..+..  
T Consensus        15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~--~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~~--   90 (225)
T TIGR00024        15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIAD--KYGIEALIINGDLKHEFKKGLEWRFIREFIEVTFR--   90 (225)
T ss_pred             cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHh--hcCCCEEEEcCccccccCChHHHHHHHHHHHhcCC--
Confidence            4789999999 5433322            23333322110  0124899999999975543   3445556666542  


Q ss_pred             CCCcEEEECCCcccch
Q 025290           69 PNQKHVFLSGNHDLGF   84 (255)
Q Consensus        69 p~~~v~~i~GNHE~~~   84 (255)
                         .+++|+||||...
T Consensus        91 ---~v~~V~GNHD~~~  103 (225)
T TIGR00024        91 ---DLILIRGNHDALI  103 (225)
T ss_pred             ---cEEEECCCCCCcc
Confidence               5999999999765

Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.

>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain

Probab=98.07  E-value=6.7e-06  Score=67.86  Aligned_cols=46  Identities=24%  Similarity=0.474  Sum_probs=29.4

Q ss_pred             CcEEEEeCCcCCCCCCh-H----HHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290           38 SAIIIFLGDYCDRGPNT-R----EVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        38 ~d~li~lGDlvDrG~~s-~----~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .|.+|++||+++.+... .    +.+..+.++....++..+++|+||||..
T Consensus        39 pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~   89 (156)
T cd08165          39 PDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG   89 (156)
T ss_pred             CCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence            48999999999987532 1    2233333332222223699999999974

MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to

>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain

Probab=98.07  E-value=1.8e-05  Score=70.13  Aligned_cols=75  Identities=21%  Similarity=0.283  Sum_probs=49.1

Q ss_pred             CCCCeEEEEccCCCCH----------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH-------HHH
Q 025290            2 SRPRRVCCIGDVHGYI----------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR-------EVI   58 (255)
Q Consensus         2 ~~~~ri~vigDIHG~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~-------~vl   58 (255)
                      +.+-+++++||+|-..                ..++++++.+....+    ..+.+|++||+++.+....       ...
T Consensus         2 ~~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~----~pd~ii~~GDl~~~~~~~~~~~~~~~~~~   77 (262)
T cd07395           2 SGPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNP----KPKFVVVCGDLVNAMPGDELRERQVSDLK   77 (262)
T ss_pred             CCCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCC----CCCEEEEeCCcCCCCcchhhHHHHHHHHH
Confidence            3467899999999552                235666666654321    2489999999999886531       223


Q ss_pred             HHHHhCCCCCCCCcEEEECCCcccc
Q 025290           59 DFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        59 ~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      +.+.++.   ++..++.++||||..
T Consensus        78 ~~~~~~~---~~vp~~~i~GNHD~~   99 (262)
T cd07395          78 DVLSLLD---PDIPLVCVCGNHDVG   99 (262)
T ss_pred             HHHhhcc---CCCcEEEeCCCCCCC
Confidence            3333332   223599999999973

CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th

>COG1408 Predicted phosphohydrolases [General function prediction only]

Probab=98.07  E-value=1.2e-05  Score=72.87  Aligned_cols=73  Identities=23%  Similarity=0.402  Sum_probs=55.6

Q ss_pred             CCeEEEEccCCCCHHH--HHHHHHHhhhccCCCCCCCcEEEEeCCcCCC--CCChHHHHHHHHhCCCCCCCCcEEEECCC
Q 025290            4 PRRVCCIGDVHGYISK--LQNLWKNLETHIGPSDFNSAIIIFLGDYCDR--GPNTREVIDFLISLPTKYPNQKHVFLSGN   79 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~--l~~lL~~~~~~~~~~~~~~d~li~lGDlvDr--G~~s~~vl~~l~~l~~~~p~~~v~~i~GN   79 (255)
                      ..||+.+||+|.+...  ..+++..+....      .|.++++||++|+  -+...++...+..+...++   +++|.||
T Consensus        44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~------~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~g---v~av~GN  114 (284)
T COG1408          44 GLKIVQLSDLHSLPFREEKLALLIAIANEL------PDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLG---VFAVLGN  114 (284)
T ss_pred             CeEEEEeehhhhchhhHHHHHHHHHHHhcC------CCEEEEEeeeecCCCCCCHHHHHHHHHhhhccCC---EEEEecc
Confidence            4689999999977433  344555554433      3999999999995  5667788999999988764   9999999


Q ss_pred             cccchh
Q 025290           80 HDLGFA   85 (255)
Q Consensus        80 HE~~~~   85 (255)
                      ||...-
T Consensus       115 Hd~~~~  120 (284)
T COG1408         115 HDYGVD  120 (284)
T ss_pred             cccccc
Confidence            997543

>COG1409 Icc Predicted phosphohydrolases [General function prediction only]

Probab=98.06  E-value=1.8e-05  Score=69.93  Aligned_cols=75  Identities=23%  Similarity=0.328  Sum_probs=51.2

Q ss_pred             CeEEEEccCCCC------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-h-HHHHHHHHhCCCCCCCCcEEEE
Q 025290            5 RRVCCIGDVHGY------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-T-REVIDFLISLPTKYPNQKHVFL   76 (255)
Q Consensus         5 ~ri~vigDIHG~------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s-~~vl~~l~~l~~~~p~~~v~~i   76 (255)
                      +||+.|||+|-.      ...+.++++.++...      .|.+|++||+.+.|.. + ....+++......   ..++++
T Consensus         1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~------~D~~v~tGDl~~~~~~~~~~~~~~~l~~~~~~---~~~~~v   71 (301)
T COG1409           1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLK------PDLLVVTGDLTNDGEPEEYRRLKELLARLELP---APVIVV   71 (301)
T ss_pred             CeEEEEecCcccccccchHHHHHHHHHHHhcCC------CCEEEEccCcCCCCCHHHHHHHHHHHhhccCC---CceEee
Confidence            589999999955      345566777776332      3999999999999653 2 2344455422222   258999


Q ss_pred             CCCcccchhhhh
Q 025290           77 SGNHDLGFAAFV   88 (255)
Q Consensus        77 ~GNHE~~~~~~~   88 (255)
                      +||||.......
T Consensus        72 pGNHD~~~~~~~   83 (301)
T COG1409          72 PGNHDARVVNGE   83 (301)
T ss_pred             CCCCcCCchHHH
Confidence            999997766543

>PRK04036 DNA polymerase II small subunit; Validated

Probab=98.05  E-value=1.4e-05  Score=77.73  Aligned_cols=78  Identities=24%  Similarity=0.372  Sum_probs=50.4

Q ss_pred             CCeEEEEccCC-CCH----HHHHHHHHHhhhccCCC---CCCCcEEEEeCCcCCC-CCCh---------------HHHHH
Q 025290            4 PRRVCCIGDVH-GYI----SKLQNLWKNLETHIGPS---DFNSAIIIFLGDYCDR-GPNT---------------REVID   59 (255)
Q Consensus         4 ~~ri~vigDIH-G~~----~~l~~lL~~~~~~~~~~---~~~~d~li~lGDlvDr-G~~s---------------~~vl~   59 (255)
                      ..++++|||+| |..    ..++.+++.+.......   ....+.+|++||++|. |+.+               .++.+
T Consensus       243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~  322 (504)
T PRK04036        243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE  322 (504)
T ss_pred             ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence            46899999999 542    34566666655221100   0124799999999994 2211               24667


Q ss_pred             HHHhCCCCCCCCcEEEECCCcccch
Q 025290           60 FLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus        60 ~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      ++.++....   .+++++||||...
T Consensus       323 ~L~~L~~~i---~V~~ipGNHD~~~  344 (504)
T PRK04036        323 YLKQIPEDI---KIIISPGNHDAVR  344 (504)
T ss_pred             HHHhhhcCC---eEEEecCCCcchh
Confidence            777776543   5999999999754

>COG0622 Predicted phosphoesterase [General function prediction only]

Probab=98.02  E-value=1.2e-05  Score=67.68  Aligned_cols=66  Identities=23%  Similarity=0.283  Sum_probs=45.7

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHh-CCCCCCCCcEEEECCCccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS-LPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~-l~~~~p~~~v~~i~GNHE~   82 (255)
                      +|+|.|+||+|+...+....++......      .|.+|.+||++...+     +..+.. +..     +++.|+||+|.
T Consensus         1 ~m~ilviSDtH~~~~~~~~~~~~~~~~~------~d~vih~GD~~~~~~-----~~~l~~~~~~-----~i~~V~GN~D~   64 (172)
T COG0622           1 MMKILVISDTHGPLRAIEKALKIFNLEK------VDAVIHAGDSTSPFT-----LDALEGGLAA-----KLIAVRGNCDG   64 (172)
T ss_pred             CcEEEEEeccCCChhhhhHHHHHhhhcC------CCEEEECCCcCCccc-----hHHhhccccc-----ceEEEEccCCC
Confidence            4899999999999865455554443332      489999999996543     222222 222     68999999998


Q ss_pred             chh
Q 025290           83 GFA   85 (255)
Q Consensus        83 ~~~   85 (255)
                      ...
T Consensus        65 ~~~   67 (172)
T COG0622          65 EVD   67 (172)
T ss_pred             ccc
Confidence            643

>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]

Probab=97.99  E-value=1.3e-05  Score=75.34  Aligned_cols=72  Identities=19%  Similarity=0.287  Sum_probs=50.7

Q ss_pred             CeEEEEccCC-C------------CHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHH----HHHHHhCCCC
Q 025290            5 RRVCCIGDVH-G------------YISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREV----IDFLISLPTK   67 (255)
Q Consensus         5 ~ri~vigDIH-G------------~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~v----l~~l~~l~~~   67 (255)
                      ||++.+||.| |            .+.+|..+++.+....      .|.+|+.||++|+..-|..+    ++.++.++. 
T Consensus         1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~------vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~-   73 (390)
T COG0420           1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEK------VDFVLIAGDLFDTNNPSPRALKLFLEALRRLKD-   73 (390)
T ss_pred             CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHcc------CCEEEEccccccCCCCCHHHHHHHHHHHHHhcc-
Confidence            7999999999 4            2455566777765543      39999999999987655443    344444443 


Q ss_pred             CCCCcEEEECCCcccch
Q 025290           68 YPNQKHVFLSGNHDLGF   84 (255)
Q Consensus        68 ~p~~~v~~i~GNHE~~~   84 (255)
                       .+..++.|.||||..-
T Consensus        74 -~~Ipv~~I~GNHD~~~   89 (390)
T COG0420          74 -AGIPVVVIAGNHDSPS   89 (390)
T ss_pred             -CCCcEEEecCCCCchh
Confidence             2346999999999643

>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain

Probab=97.96  E-value=3.1e-05  Score=65.85  Aligned_cols=69  Identities=17%  Similarity=0.241  Sum_probs=42.0

Q ss_pred             CCeEEEEccCCCCHH------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh---HHHHHHHHh-CCC-
Q 025290            4 PRRVCCIGDVHGYIS------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT---REVIDFLIS-LPT-   66 (255)
Q Consensus         4 ~~ri~vigDIHG~~~------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s---~~vl~~l~~-l~~-   66 (255)
                      .+|+++|||+|-...            .+..+.+.+...      ..+.+|++||+++.+...   .+.++.+.+ +.. 
T Consensus         2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~   75 (199)
T cd07383           2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAE------KPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDR   75 (199)
T ss_pred             ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhc------CCCEEEECCccccCCCCchHHHHHHHHHHHHHHHc
Confidence            468999999994221            122222333322      248999999999976643   344433322 221 


Q ss_pred             CCCCCcEEEECCCcc
Q 025290           67 KYPNQKHVFLSGNHD   81 (255)
Q Consensus        67 ~~p~~~v~~i~GNHE   81 (255)
                      ..   .++++.||||
T Consensus        76 ~~---p~~~~~GNHD   87 (199)
T cd07383          76 KI---PWAATFGNHD   87 (199)
T ss_pred             CC---CEEEECccCC
Confidence            22   4889999999

DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP

>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A

Probab=97.93  E-value=2e-05  Score=68.76  Aligned_cols=73  Identities=19%  Similarity=0.283  Sum_probs=44.8

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH----------------------------
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR----------------------------   55 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~----------------------------   55 (255)
                      .++|++|||.||+++.+.++.+.+....+      |.++++||++-....+.                            
T Consensus         5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~------D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~   78 (255)
T PF14582_consen    5 VRKILAISNFRGDFELLERLVEVIPEKGP------DAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEAL   78 (255)
T ss_dssp             --EEEEEE--TT-HHHHHHHHHHHHHHT-------SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHH
T ss_pred             chhheeecCcchHHHHHHHHHhhccccCC------CEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHH
Confidence            57899999999999999999999877654      99999999986543222                            


Q ss_pred             -HHHHHHHhCCCCCCCCcEEEECCCcccchhhh
Q 025290           56 -EVIDFLISLPTKYPNQKHVFLSGNHDLGFAAF   87 (255)
Q Consensus        56 -~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~~   87 (255)
                       +.++.|..+..     .+.+|+||||.-...+
T Consensus        79 ~~ff~~L~~~~~-----p~~~vPG~~Dap~~~~  106 (255)
T PF14582_consen   79 DKFFRILGELGV-----PVFVVPGNMDAPERFF  106 (255)
T ss_dssp             HHHHHHHHCC-S-----EEEEE--TTS-SHHHH
T ss_pred             HHHHHHHHhcCC-----cEEEecCCCCchHHHH
Confidence             23333433332     5899999999744433

>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain

Probab=97.90  E-value=3.6e-05  Score=68.92  Aligned_cols=72  Identities=21%  Similarity=0.383  Sum_probs=44.8

Q ss_pred             EEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-H----------HHH---HHHHhCCCCCCCCc
Q 025290            7 VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-R----------EVI---DFLISLPTKYPNQK   72 (255)
Q Consensus         7 i~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-~----------~vl---~~l~~l~~~~p~~~   72 (255)
                      |+|+||+||+++.+-+.++.......   .+.|.+|++||+-..+..+ .          ...   +++.... +.| ..
T Consensus         1 i~v~Gd~HG~~~~~~~~~~~~~~~~~---~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~-~~p-~~   75 (262)
T cd00844           1 IAVEGCCHGELDKIYETLEKIEKKEG---TKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEK-KAP-IL   75 (262)
T ss_pred             CEEEecCCccHHHHHHHHHHHHHhcC---CCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCc-cCC-ee
Confidence            58999999998888765555433211   1359999999996554332 1          112   2222222 233 23


Q ss_pred             EEEECCCcccc
Q 025290           73 HVFLSGNHDLG   83 (255)
Q Consensus        73 v~~i~GNHE~~   83 (255)
                      +++|.||||..
T Consensus        76 t~fi~GNHE~~   86 (262)
T cd00844          76 TIFIGGNHEAS   86 (262)
T ss_pred             EEEECCCCCCH
Confidence            79999999963

Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s

>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain

Probab=97.89  E-value=4.7e-05  Score=66.93  Aligned_cols=72  Identities=25%  Similarity=0.349  Sum_probs=44.9

Q ss_pred             EEEccCC--CC---HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC----------------hHHHHHHHHhCCC
Q 025290            8 CCIGDVH--GY---ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN----------------TREVIDFLISLPT   66 (255)
Q Consensus         8 ~vigDIH--G~---~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~----------------s~~vl~~l~~l~~   66 (255)
                      ++|||+|  +.   ...++.+++.+....+ .....+.+|++||++|....                -..+.+++.++..
T Consensus         2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~-~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~   80 (243)
T cd07386           2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDD-SASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS   80 (243)
T ss_pred             EEecccCCCchhhhHHHHHHHHHHHcCCcc-cccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc
Confidence            6899999  33   1334455555543211 00124899999999997310                1235566666664


Q ss_pred             CCCCCcEEEECCCcccc
Q 025290           67 KYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        67 ~~p~~~v~~i~GNHE~~   83 (255)
                      ..   .++++.||||..
T Consensus        81 ~~---~v~~ipGNHD~~   94 (243)
T cd07386          81 HI---KIIIIPGNHDAV   94 (243)
T ss_pred             CC---eEEEeCCCCCcc
Confidence            43   599999999975

The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera

>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain

Probab=97.87  E-value=1.8e-05  Score=67.71  Aligned_cols=48  Identities=27%  Similarity=0.479  Sum_probs=29.2

Q ss_pred             CcEEEEeCCcCCCCC-------C-hHHHHHHHHhCCCCCCCCcEEEECCCcccchhhh
Q 025290           38 SAIIIFLGDYCDRGP-------N-TREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAF   87 (255)
Q Consensus        38 ~d~li~lGDlvDrG~-------~-s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~~   87 (255)
                      .+.+|++||++|...       . ..+.+..+..+...  +.++++|.||||..+...
T Consensus        31 ~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~v~~v~GNHD~~~~~~   86 (217)
T cd07398          31 ADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADR--GTRVYYVPGNHDFLLGDF   86 (217)
T ss_pred             CCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHC--CCeEEEECCCchHHHHhH
Confidence            489999999998531       1 11221222222211  236999999999876554

YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l

>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.77  E-value=3.4e-05  Score=67.60  Aligned_cols=70  Identities=26%  Similarity=0.441  Sum_probs=45.7

Q ss_pred             EEEccCC-C-CH----HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-----CC--hHHHHHHHHhCCCCCCCCcEE
Q 025290            8 CCIGDVH-G-YI----SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-----PN--TREVIDFLISLPTKYPNQKHV   74 (255)
Q Consensus         8 ~vigDIH-G-~~----~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-----~~--s~~vl~~l~~l~~~~p~~~v~   74 (255)
                      ++|||+| | .-    +.|..+|+...   +    ..+.++++||++|..     +.  -.+|...+..+..+  +.+++
T Consensus         1 lFISDlHL~~~~p~~t~~fl~Fl~~~a---~----~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~--G~~v~   71 (237)
T COG2908           1 LFISDLHLGPKRPALTAFFLDFLREEA---A----QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARK--GTRVY   71 (237)
T ss_pred             CeeeccccCCCCcHHHHHHHHHHHhcc---c----cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhc--CCeEE
Confidence            4799999 3 23    33344444332   1    348999999999743     11  24677777776665  45799


Q ss_pred             EECCCcccchhh
Q 025290           75 FLSGNHDLGFAA   86 (255)
Q Consensus        75 ~i~GNHE~~~~~   86 (255)
                      ++.||||..+-+
T Consensus        72 ~i~GN~Dfll~~   83 (237)
T COG2908          72 YIHGNHDFLLGK   83 (237)
T ss_pred             EecCchHHHHHH
Confidence            999999954443

>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain

Probab=97.76  E-value=0.0001  Score=65.51  Aligned_cols=70  Identities=20%  Similarity=0.193  Sum_probs=42.4

Q ss_pred             EEEEccCCCCHH---H---H-HHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--------H---HHHHHHHhCCCCC
Q 025290            7 VCCIGDVHGYIS---K---L-QNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--------R---EVIDFLISLPTKY   68 (255)
Q Consensus         7 i~vigDIHG~~~---~---l-~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--------~---~vl~~l~~l~~~~   68 (255)
                      ++.|||+|-...   .   . ..+++.+....      .+.+|++||++|++...        .   +.++.+.......
T Consensus         2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~------pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (256)
T cd07401           2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIK------PALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVIN   75 (256)
T ss_pred             EEEecccccCCcCchhhhhHHHHHHHHHHhhC------CCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCC
Confidence            578999994211   1   2 33455554443      38999999999976521        1   2334333332211


Q ss_pred             CCCcEEEECCCcccc
Q 025290           69 PNQKHVFLSGNHDLG   83 (255)
Q Consensus        69 p~~~v~~i~GNHE~~   83 (255)
                      + ..++.++||||..
T Consensus        76 ~-~p~~~v~GNHD~~   89 (256)
T cd07401          76 K-EKWFDIRGNHDLF   89 (256)
T ss_pred             c-ceEEEeCCCCCcC
Confidence            1 2589999999985

TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.

>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain

Probab=97.73  E-value=0.0001  Score=64.77  Aligned_cols=67  Identities=22%  Similarity=0.399  Sum_probs=49.1

Q ss_pred             eEEEEccCCCCH---------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-----HHHHHHHHhCCCCCCCC
Q 025290            6 RVCCIGDVHGYI---------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-----REVIDFLISLPTKYPNQ   71 (255)
Q Consensus         6 ri~vigDIHG~~---------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-----~~vl~~l~~l~~~~p~~   71 (255)
                      +|+.+||+||.+         ..+..++++++...+     ...++..||+++..+.+     ..+++.+..+..     
T Consensus         2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~-----~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g~-----   71 (252)
T cd00845           2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENE-----NTLLLDAGDNFDGSPPSTATKGEANIELMNALGY-----   71 (252)
T ss_pred             EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCC-----CeEEEeCCccCCCccchhccCCcHHHHHHHhcCC-----
Confidence            789999999776         677788888766532     34778899999987754     367777777653     


Q ss_pred             cEEEECCCcccc
Q 025290           72 KHVFLSGNHDLG   83 (255)
Q Consensus        72 ~v~~i~GNHE~~   83 (255)
                       .+++.||||..
T Consensus        72 -d~~~~GNHe~d   82 (252)
T cd00845          72 -DAVTIGNHEFD   82 (252)
T ss_pred             -CEEeecccccc
Confidence             24567999964

This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich

>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain

Probab=97.72  E-value=4.4e-05  Score=68.41  Aligned_cols=75  Identities=21%  Similarity=0.377  Sum_probs=45.2

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-----HHHHHHHHhCCCCCCCCcEEEEC
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-----REVIDFLISLPTKYPNQKHVFLS   77 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-----~~vl~~l~~l~~~~p~~~v~~i~   77 (255)
                      .+.|++++||.|.....-..+++.+.....    ..+.++++||+++.+...     ...++.+..+....|   ++.++
T Consensus         3 ~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~----~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P---~~~~~   75 (294)
T cd00839           3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELG----NYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP---YMVTP   75 (294)
T ss_pred             CcEEEEEEEECCCCCCCcHHHHHHHHhccC----CccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC---cEEcC
Confidence            467999999999632222334433332111    248999999999644322     233444444433344   88999


Q ss_pred             CCcccch
Q 025290           78 GNHDLGF   84 (255)
Q Consensus        78 GNHE~~~   84 (255)
                      ||||...
T Consensus        76 GNHD~~~   82 (294)
T cd00839          76 GNHEADY   82 (294)
T ss_pred             ccccccc
Confidence            9999753

Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver

>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain

Probab=97.41  E-value=0.00025  Score=60.80  Aligned_cols=46  Identities=30%  Similarity=0.589  Sum_probs=33.4

Q ss_pred             CcEEEEeCCcCCCCCCh--HHHHHHHHhCCCC---CCCCcEEEECCCcccc
Q 025290           38 SAIIIFLGDYCDRGPNT--REVIDFLISLPTK---YPNQKHVFLSGNHDLG   83 (255)
Q Consensus        38 ~d~li~lGDlvDrG~~s--~~vl~~l~~l~~~---~p~~~v~~i~GNHE~~   83 (255)
                      .|.+||+||++|.|+.+  .+..+.+.++...   -++..+++|.||||.-
T Consensus        43 PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG   93 (195)
T cd08166          43 PDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG   93 (195)
T ss_pred             CCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence            48999999999999854  3456655555432   2345789999999964

A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R

>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain

Probab=97.38  E-value=0.00041  Score=62.08  Aligned_cols=66  Identities=21%  Similarity=0.351  Sum_probs=45.2

Q ss_pred             eEEEEccCCCCH----------------HHHHHHHHHhhhccCCCCCCCcEEEE-eCCcCCCCCC-----------hHHH
Q 025290            6 RVCCIGDVHGYI----------------SKLQNLWKNLETHIGPSDFNSAIIIF-LGDYCDRGPN-----------TREV   57 (255)
Q Consensus         6 ri~vigDIHG~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~-lGDlvDrG~~-----------s~~v   57 (255)
                      +|+.++|+||.+                ..+..+++.++...+      +.+++ .||+++..+.           ...+
T Consensus         2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~------~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~   75 (277)
T cd07410           2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENP------NTLLIDNGDTIQGSPLADYYAKIEDGDPHPM   75 (277)
T ss_pred             eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCC------CeEEEeCCccCCccHHHHHhhhcccCCCChH
Confidence            689999999986                446677777765432      45554 8999986652           2346


Q ss_pred             HHHHHhCCCCCCCCcEEEECCCcccc
Q 025290           58 IDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        58 l~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      ++.+..+..     . ++..||||..
T Consensus        76 ~~~ln~~g~-----d-~~~lGNHe~d   95 (277)
T cd07410          76 IAAMNALGY-----D-AGTLGNHEFN   95 (277)
T ss_pred             HHHHHhcCC-----C-EEeecccCcc
Confidence            777777653     2 4567999964

CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos

>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain

Probab=97.33  E-value=0.00044  Score=57.91  Aligned_cols=47  Identities=26%  Similarity=0.516  Sum_probs=30.4

Q ss_pred             CcEEEEeCCcCCCCCCh-----HHHHHHHHhCCCCCC----CCcEEEECCCcccch
Q 025290           38 SAIIIFLGDYCDRGPNT-----REVIDFLISLPTKYP----NQKHVFLSGNHDLGF   84 (255)
Q Consensus        38 ~d~li~lGDlvDrG~~s-----~~vl~~l~~l~~~~p----~~~v~~i~GNHE~~~   84 (255)
                      .+.+|++||++|.+...     .+.++.+.++....+    +..+++|+||||...
T Consensus        46 pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~  101 (171)
T cd07384          46 PDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY  101 (171)
T ss_pred             CCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence            48999999999987642     123444434321110    236999999999864

Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit

>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]

Probab=97.21  E-value=0.00018  Score=62.44  Aligned_cols=117  Identities=18%  Similarity=0.290  Sum_probs=83.3

Q ss_pred             CcEEEECCCc--ccchhhhh----cCCCCCCCCCcccccccccccchhhcccc---cCCCcchhhccccccccccceecc
Q 025290           71 QKHVFLSGNH--DLGFAAFV----GVLPEPGGGLGFKEGWKQYEQNEEREGWF---KGDGYEKMHLQGRRWGGKITVKFN  141 (255)
Q Consensus        71 ~~v~~i~GNH--E~~~~~~~----~~~~~~~~~~~~~~~w~~~~~~~~~~~w~---~~~~~~~~~~~~r~~gg~~~~~~~  141 (255)
                      ..+.||-|-=  |...++.+    +...-|.+|.+++.+|   ++|++.+.|.   ||.||        .+|.+++++|+
T Consensus       157 ~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmW---SDPedve~W~vSpRGAGw--------lFGskVt~eF~  225 (306)
T KOG0373|consen  157 EKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMW---SDPEDVETWAVSPRGAGW--------LFGSKVTTEFN  225 (306)
T ss_pred             CcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceec---cChhhhhhheeCCCCcce--------eechhhhHHHH
Confidence            4688887765  44444322    2344588899999999   7899999997   66676        69999999999


Q ss_pred             cccCCcccCcccCcchhhhhcCCCcChHHHHhcCCHHHHHHHhcCcceEE-ecCeeeecCCCc-cccCeEEEeeeccCCC
Q 025290          142 AAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHE-EDEVCVETNDGI-KHCKLIAVHAGLERGK  219 (255)
Q Consensus       142 ~~~~~~~~~~~~~~~~tl~sy~~~~~~~~~~~~~~~~~~~~l~~LP~~~~-~~~~~~~~~~~~-~~~~~~~VHAGi~p~~  219 (255)
                      ..+++.+.                          .++|.-.-+++...+. .+.+||+|+||| +||+.++.  =+.-+.
T Consensus       226 ~iN~L~Li--------------------------cRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAs--i~~~d~  277 (306)
T KOG0373|consen  226 HINNLNLI--------------------------CRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVAS--IMSFDD  277 (306)
T ss_pred             hccchHHH--------------------------HhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeee--EEEecc
Confidence            88875433                          4567777777777765 447899999999 99988752  222334


Q ss_pred             ChHHHHH
Q 025290          220 KVGEQLE  226 (255)
Q Consensus       220 ~l~~q~~  226 (255)
                      .++.+..
T Consensus       278 ~~~r~~k  284 (306)
T KOG0373|consen  278 NLERETK  284 (306)
T ss_pred             cCCccce
Confidence            4454444

>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain

Probab=97.20  E-value=0.0014  Score=53.87  Aligned_cols=68  Identities=22%  Similarity=0.386  Sum_probs=47.3

Q ss_pred             EEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290            8 CCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         8 ~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      +|+||+||+++.+-+-++.+.....    +-|.+|++||+..-.....+.-.+... .++.| ...+++-|||+
T Consensus         1 LV~G~~~G~l~~~~~kv~~~~~k~g----pFd~~ic~Gdff~~~~~~~~~~~y~~g-~~~~p-ipTyf~ggn~~   68 (150)
T cd07380           1 LVCGDVNGRLKALFEKVNTINKKKG----PFDALLCVGDFFGDDEDDEELEAYKDG-SKKVP-IPTYFLGGNNP   68 (150)
T ss_pred             CeeecCCccHHHHHHHHHHHhcccC----CeeEEEEecCccCCccchhhHHHHhcC-CccCC-CCEEEECCCCC
Confidence            4899999998887666666543222    469999999999765555444444443 33344 35899999998

CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site

>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]

Probab=97.15  E-value=8.8e-05  Score=65.24  Aligned_cols=104  Identities=22%  Similarity=0.379  Sum_probs=79.7

Q ss_pred             CCcEEEECCCcc--cchhhhh----cCCCCCCCCCcccccccccccchhhcccc---cCCCcchhhccccccccccceec
Q 025290           70 NQKHVFLSGNHD--LGFAAFV----GVLPEPGGGLGFKEGWKQYEQNEEREGWF---KGDGYEKMHLQGRRWGGKITVKF  140 (255)
Q Consensus        70 ~~~v~~i~GNHE--~~~~~~~----~~~~~~~~~~~~~~~w~~~~~~~~~~~w~---~~~~~~~~~~~~r~~gg~~~~~~  140 (255)
                      ++++.||-|-=-  .+-++.+    +..+.|+++.+++.+|   ++|++...|-   ||.||        .||+++...|
T Consensus       153 d~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllW---SDPee~~g~~~SPRGaGy--------lFG~dvv~~F  221 (303)
T KOG0372|consen  153 DGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLW---SDPEEGPGWGLSPRGAGY--------LFGEDVVESF  221 (303)
T ss_pred             cCcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheec---cCcccCCCcccCCCCccc--------cccHHHHHHH
Confidence            357899877653  2222222    3355688999999999   7888888896   67776        7999988888


Q ss_pred             ccccCCcccCcccCcchhhhhcCCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCc-cccCeEE
Q 025290          141 NAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGI-KHCKLIA  210 (255)
Q Consensus       141 ~~~~~~~~~~~~~~~~~tl~sy~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~-~~~~~~~  210 (255)
                      +..++.++                          +.++|.-.++++...+....+||+++||| ++|+.++
T Consensus       222 ~~~N~~~~--------------------------I~RaHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~A  266 (303)
T KOG0372|consen  222 LEANGLSL--------------------------ICRAHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVA  266 (303)
T ss_pred             HHhCChHH--------------------------HHHHHHHHHhhHHHhcCCceEEEecCCchhhhcCChH
Confidence            88776542                          34678888899988888889999999999 8888775

>PLN02533 probable purple acid phosphatase

Probab=97.11  E-value=0.00097  Score=63.74  Aligned_cols=70  Identities=17%  Similarity=0.249  Sum_probs=44.6

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh---HHHHHHHHhCCCCCCCCcEEEECCCc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT---REVIDFLISLPTKYPNQKHVFLSGNH   80 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s---~~vl~~l~~l~~~~p~~~v~~i~GNH   80 (255)
                      +.+++++||+|-. .....+++.+....      .|.++++||+++.+...   .+..+.+..+....|   ++.++|||
T Consensus       139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~------pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P---~m~~~GNH  208 (427)
T PLN02533        139 PIKFAVSGDLGTS-EWTKSTLEHVSKWD------YDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP---WMVTHGNH  208 (427)
T ss_pred             CeEEEEEEeCCCC-cccHHHHHHHHhcC------CCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc---eEEeCccc
Confidence            4689999999632 22234555554432      38999999999754322   123344444444444   88999999


Q ss_pred             ccc
Q 025290           81 DLG   83 (255)
Q Consensus        81 E~~   83 (255)
                      |..
T Consensus       209 E~~  211 (427)
T PLN02533        209 ELE  211 (427)
T ss_pred             ccc
Confidence            975

>COG1768 Predicted phosphohydrolase [General function prediction only]

Probab=97.02  E-value=0.0011  Score=56.13  Aligned_cols=72  Identities=24%  Similarity=0.432  Sum_probs=48.6

Q ss_pred             CeEEEEccCCCCH--------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcC--CCCCChHHHHHHHHhCCCCC
Q 025290            5 RRVCCIGDVHGYI--------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYC--DRGPNTREVIDFLISLPTKY   68 (255)
Q Consensus         5 ~ri~vigDIHG~~--------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlv--DrG~~s~~vl~~l~~l~~~~   68 (255)
                      |||++|+|+|=.+              ..-+++-+.+.....    +.|.+++-||+-  -|=++..+-++++-.|.-  
T Consensus         1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k~W~~~v~----~eDiVllpGDiSWaM~l~ea~~Dl~~i~~LPG--   74 (230)
T COG1768           1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKKHWRSKVS----PEDIVLLPGDISWAMRLEEAEEDLRFIGDLPG--   74 (230)
T ss_pred             CceeeeehhhHhhCCCCceeecCCcccCchHHHHHHHHhcCC----hhhEEEecccchhheechhhhhhhhhhhcCCC--
Confidence            7899999999111              112334444433222    358999999994  445667778888888763  


Q ss_pred             CCCcEEEECCCcccchh
Q 025290           69 PNQKHVFLSGNHDLGFA   85 (255)
Q Consensus        69 p~~~v~~i~GNHE~~~~   85 (255)
                         .-+.+|||||++.-
T Consensus        75 ---~K~m~rGNHDYWw~   88 (230)
T COG1768          75 ---TKYMIRGNHDYWWS   88 (230)
T ss_pred             ---cEEEEecCCccccc
Confidence               46789999998754

>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]

Probab=97.02  E-value=0.0026  Score=55.93  Aligned_cols=75  Identities=24%  Similarity=0.341  Sum_probs=46.3

Q ss_pred             CCeEEEEccCCCCHHH----------------HHHHHH-HhhhccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHHHH
Q 025290            4 PRRVCCIGDVHGYISK----------------LQNLWK-NLETHIGPSDFNSAIIIFLGDYCDRGPN-----TREVIDFL   61 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~----------------l~~lL~-~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~~l   61 (255)
                      ..+++||+|+|=.+..                +.+.++ .+...      ..+.+|++||+-.-.+.     ..++-.++
T Consensus        19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~------~p~~lIilGD~KH~~~~~~~~e~~~~~~f~   92 (235)
T COG1407          19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERY------GPKRLIILGDLKHEFGKSLRQEKEEVREFL   92 (235)
T ss_pred             cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhc------CCCEEEEcCccccccCccccccHHHHHHHH
Confidence            4688999999944332                223333 22222      24899999999754332     24455555


Q ss_pred             HhCCCCCCCCcEEEECCCcccchhhhh
Q 025290           62 ISLPTKYPNQKHVFLSGNHDLGFAAFV   88 (255)
Q Consensus        62 ~~l~~~~p~~~v~~i~GNHE~~~~~~~   88 (255)
                      ..+...    .+++|+||||...-..+
T Consensus        93 ~~~~~~----evi~i~GNHD~~i~~~~  115 (235)
T COG1407          93 ELLDER----EVIIIRGNHDNGIEEIL  115 (235)
T ss_pred             HHhccC----cEEEEeccCCCcccccc
Confidence            544433    48999999997655543

>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain

Probab=96.99  E-value=0.0022  Score=56.87  Aligned_cols=66  Identities=20%  Similarity=0.359  Sum_probs=46.7

Q ss_pred             eEEEEccCCCC----------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-----HHHHHHHHhCCCCCCC
Q 025290            6 RVCCIGDVHGY----------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-----REVIDFLISLPTKYPN   70 (255)
Q Consensus         6 ri~vigDIHG~----------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-----~~vl~~l~~l~~~~p~   70 (255)
                      +|+.++|+||.          +..+..++++++.. +     ...++..||+++..+.+     ..+++.+..+..    
T Consensus         2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~-~-----~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----   71 (257)
T cd07408           2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL-D-----NDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----   71 (257)
T ss_pred             EEEEeccCcccccCCCCccccHHHHHHHHHHHHhc-C-----CEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----
Confidence            78999999986          45566777776543 2     47889999999876532     456677766653    


Q ss_pred             CcEEEECCCcccc
Q 025290           71 QKHVFLSGNHDLG   83 (255)
Q Consensus        71 ~~v~~i~GNHE~~   83 (255)
                       .+ ...||||..
T Consensus        72 -d~-~~~GNHefd   82 (257)
T cd07408          72 -DA-VTPGNHEFD   82 (257)
T ss_pred             -cE-Ecccccccc
Confidence             24 467999953

SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet

>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain

Probab=96.87  E-value=0.002  Score=57.50  Aligned_cols=45  Identities=27%  Similarity=0.388  Sum_probs=27.9

Q ss_pred             CcEEEEeCCcCCCCCChH-----HHHHHHHhC-CCCCCCCcEEEECCCccc
Q 025290           38 SAIIIFLGDYCDRGPNTR-----EVIDFLISL-PTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus        38 ~d~li~lGDlvDrG~~s~-----~vl~~l~~l-~~~~p~~~v~~i~GNHE~   82 (255)
                      .|.+|++||++|.|....     +-++.+.++ ........+++|+||||.
T Consensus        46 PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDi   96 (257)
T cd08163          46 PDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDI   96 (257)
T ss_pred             CCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCccc
Confidence            389999999999987521     122222222 211001248999999996

Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site

>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain

Probab=96.77  E-value=0.0035  Score=56.67  Aligned_cols=67  Identities=19%  Similarity=0.359  Sum_probs=47.4

Q ss_pred             eEEEEccCCCCH--------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-h-----HHHHHHHHhCC
Q 025290            6 RVCCIGDVHGYI--------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-T-----REVIDFLISLP   65 (255)
Q Consensus         6 ri~vigDIHG~~--------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s-----~~vl~~l~~l~   65 (255)
                      +|+.++|+||++              ..+..+++.++...+     ...++..||++...+. +     ..+++.+..+.
T Consensus         2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~-----~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g   76 (288)
T cd07412           2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNP-----NSLFVSAGDLIGASPFESALLQDEPTIEALNAMG   76 (288)
T ss_pred             eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCC-----CeEEEeCCcccccccchhhcccCCcHHHHHHhhC
Confidence            689999999874              446677777765432     4688889999986654 2     35677777776


Q ss_pred             CCCCCCcEEEECCCcccc
Q 025290           66 TKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        66 ~~~p~~~v~~i~GNHE~~   83 (255)
                      ..      ....||||+-
T Consensus        77 ~D------a~t~GNHefd   88 (288)
T cd07412          77 VD------ASAVGNHEFD   88 (288)
T ss_pred             Ce------eeeecccccc
Confidence            42      3567999954

YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi

>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain

Probab=96.70  E-value=0.0058  Score=52.36  Aligned_cols=67  Identities=18%  Similarity=0.260  Sum_probs=40.6

Q ss_pred             cCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-HHHHHHHHhCCCCC--------------------CC
Q 025290           12 DVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-REVIDFLISLPTKY--------------------PN   70 (255)
Q Consensus        12 DIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-~~vl~~l~~l~~~~--------------------p~   70 (255)
                      |++|+-.-|.+..+.+.....     .+.++||||++|.+--+ .+-.+.+.++...+                    .+
T Consensus        24 d~~~~D~YL~~~~~~~~~~l~-----Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~   98 (193)
T cd08164          24 DLFGNDYFLGHIVSMMQFWLK-----PDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGK   98 (193)
T ss_pred             hhhhhHHHHHHHHHHHHHhcC-----CCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCC
Confidence            556666666666666554333     48999999999987433 22223332222111                    02


Q ss_pred             CcEEEECCCcccc
Q 025290           71 QKHVFLSGNHDLG   83 (255)
Q Consensus        71 ~~v~~i~GNHE~~   83 (255)
                      ..+++|+||||.-
T Consensus        99 i~~i~V~GNHDIG  111 (193)
T cd08164          99 TPLINIAGNHDVG  111 (193)
T ss_pred             ceEEEECCcccCC
Confidence            4678999999974

Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the

>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain

Probab=96.68  E-value=0.0061  Score=54.12  Aligned_cols=69  Identities=23%  Similarity=0.308  Sum_probs=38.9

Q ss_pred             eEEEEccCCCC--H--HHHHHHH-HHhhhccCCCCCCCcEEEEeCCcC-CCCCCh------HHHHHHHHh-CCCCCCCCc
Q 025290            6 RVCCIGDVHGY--I--SKLQNLW-KNLETHIGPSDFNSAIIIFLGDYC-DRGPNT------REVIDFLIS-LPTKYPNQK   72 (255)
Q Consensus         6 ri~vigDIHG~--~--~~l~~lL-~~~~~~~~~~~~~~d~li~lGDlv-DrG~~s------~~vl~~l~~-l~~~~p~~~   72 (255)
                      +++++||.=..  .  ..+...+ +.+...      ..+.+|++||++ +.|..+      .+.++.+.. +...   ..
T Consensus         2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~------~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~---~P   72 (277)
T cd07378           2 RFLALGDWGGGGTAGQKAVAKAMAKVAAEL------GPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQ---VP   72 (277)
T ss_pred             eEEEEeecCCCCCHHHHHHHHHHHHHHHhc------CCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhc---CC
Confidence            68999997653  1  2333333 333222      248899999997 455322      122222222 2112   35


Q ss_pred             EEEECCCcccc
Q 025290           73 HVFLSGNHDLG   83 (255)
Q Consensus        73 v~~i~GNHE~~   83 (255)
                      ++.++||||..
T Consensus        73 ~~~v~GNHD~~   83 (277)
T cd07378          73 WYLVLGNHDYS   83 (277)
T ss_pred             eEEecCCcccC
Confidence            99999999965

Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma

>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain

Probab=96.62  E-value=0.0063  Score=54.06  Aligned_cols=67  Identities=21%  Similarity=0.347  Sum_probs=49.0

Q ss_pred             eEEEEccCC----------CCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHHHHHhCCCCCCC
Q 025290            6 RVCCIGDVH----------GYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-----TREVIDFLISLPTKYPN   70 (255)
Q Consensus         6 ri~vigDIH----------G~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~~l~~l~~~~p~   70 (255)
                      +|+.+.|+|          |.+..+..++++.+...+     ...++..||+++..+.     ...+++.+..+..    
T Consensus         2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~-----~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~----   72 (257)
T cd07406           2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENP-----NTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV----   72 (257)
T ss_pred             eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCC-----CEEEEECCCccCCccchhhcCCccHHHHHHhcCC----
Confidence            688899999          346778888888765432     3588889999987653     2567777777753    


Q ss_pred             CcEEEECCCcccc
Q 025290           71 QKHVFLSGNHDLG   83 (255)
Q Consensus        71 ~~v~~i~GNHE~~   83 (255)
                        -+.+.||||..
T Consensus        73 --d~~~~GNHefd   83 (257)
T cd07406          73 --DLACFGNHEFD   83 (257)
T ss_pred             --cEEeecccccc
Confidence              25678999963

CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th

>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family

Probab=96.59  E-value=0.0083  Score=53.89  Aligned_cols=68  Identities=24%  Similarity=0.315  Sum_probs=54.2

Q ss_pred             CeEEEEccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-CChHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290            5 RRVCCIGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-PNTREVIDFLISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         5 ~ri~vigDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      |||++||||=|.  ...+...|..++.+..     .|.+|..||....| -.+.++.+.|.++..     .++.+ |||+
T Consensus         1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~-----~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv-----DviT~-GNH~   69 (266)
T TIGR00282         1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQ-----ADLVIANGENTTHGKGLTLKIYEFLKQSGV-----NYITM-GNHT   69 (266)
T ss_pred             CeEEEEEecCCHHHHHHHHHHHHHHHHhCC-----CCEEEEcCcccCCCCCCCHHHHHHHHhcCC-----CEEEc-cchh
Confidence            789999999999  6777888888876543     58999999999766 357899999998875     35544 9997


Q ss_pred             cc
Q 025290           82 LG   83 (255)
Q Consensus        82 ~~   83 (255)
                      +-
T Consensus        70 ~D   71 (266)
T TIGR00282        70 WF   71 (266)
T ss_pred             cc
Confidence            54

A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.

>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain

Probab=96.53  E-value=0.0084  Score=53.35  Aligned_cols=65  Identities=18%  Similarity=0.339  Sum_probs=43.1

Q ss_pred             eEEEEccCCCCH----------------------HHHHHHHHHhhhc-cCCCCCCCcEE-EEeCCcCCCCCCh-----HH
Q 025290            6 RVCCIGDVHGYI----------------------SKLQNLWKNLETH-IGPSDFNSAII-IFLGDYCDRGPNT-----RE   56 (255)
Q Consensus         6 ri~vigDIHG~~----------------------~~l~~lL~~~~~~-~~~~~~~~d~l-i~lGDlvDrG~~s-----~~   56 (255)
                      .|+.++|+||.+                      ..+..++++++.. .+      +.+ +..||+++..+.+     ..
T Consensus         2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~------~~l~l~~GD~~~gs~~~~~~~g~~   75 (264)
T cd07411           2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNP------NTLLLDGGDTWQGSGEALYTRGQA   75 (264)
T ss_pred             EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCC------CeEEEeCCCccCCChHHhhcCChh
Confidence            578899999963                      4456677776654 22      445 5699999876533     35


Q ss_pred             HHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290           57 VIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        57 vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      +++.+..+..      -.+. ||||..
T Consensus        76 ~~~~l~~~g~------da~~-GNHefd   95 (264)
T cd07411          76 MVDALNALGV------DAMV-GHWEFT   95 (264)
T ss_pred             HHHHHHhhCC------eEEe-cccccc
Confidence            6777777553      2334 999964

SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy

>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []

Probab=96.44  E-value=0.0025  Score=62.75  Aligned_cols=46  Identities=26%  Similarity=0.442  Sum_probs=39.3

Q ss_pred             CcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccchhhhhc
Q 025290           38 SAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAFVG   89 (255)
Q Consensus        38 ~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~~~~   89 (255)
                      -|++-++||+.||||.+-.+++.|+...      ++=+--||||..++....
T Consensus       185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~h------svDIQWGNHDIlWMGAa~  230 (640)
T PF06874_consen  185 VDHLHIVGDIYDRGPRPDKIMDRLMNYH------SVDIQWGNHDILWMGAAA  230 (640)
T ss_pred             hhheeecccccCCCCChhHHHHHHhcCC------CccccccchHHHHHHHhh
Confidence            4899999999999999999999999765      467789999987766543

This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis

>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]

Probab=96.40  E-value=0.0091  Score=56.47  Aligned_cols=46  Identities=30%  Similarity=0.597  Sum_probs=31.2

Q ss_pred             CcEEEEeCCcCCCCCCh--HHHHHHHHhCCCCCC---CCcEEEECCCcccc
Q 025290           38 SAIIIFLGDYCDRGPNT--REVIDFLISLPTKYP---NQKHVFLSGNHDLG   83 (255)
Q Consensus        38 ~d~li~lGDlvDrG~~s--~~vl~~l~~l~~~~p---~~~v~~i~GNHE~~   83 (255)
                      .|.++||||++|.|...  .|--+...++++-++   +..+..|.||||.-
T Consensus        94 PdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIG  144 (410)
T KOG3662|consen   94 PDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIG  144 (410)
T ss_pred             CCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCccccc
Confidence            48999999999988743  344444444433222   34688999999953

>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain

Probab=96.20  E-value=0.0096  Score=53.61  Aligned_cols=73  Identities=16%  Similarity=0.228  Sum_probs=45.5

Q ss_pred             EccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH--H------HHHHHHhCCCCCCCCcEEEECCC
Q 025290           10 IGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR--E------VIDFLISLPTKYPNQKHVFLSGN   79 (255)
Q Consensus        10 igDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~--~------vl~~l~~l~~~~p~~~v~~i~GN   79 (255)
                      .|+-.++  ...++.+++.+.....    ..+.+|++||+++.+....  +      .-.+...++...|+..++.+.||
T Consensus        43 ~G~~~CD~p~~l~~s~l~~i~~~~~----~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN  118 (296)
T cd00842          43 WGDYGCDSPWRLVESALEAIKKNHP----KPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN  118 (296)
T ss_pred             CcCcCCCCcHHHHHHHHHHHHHhCC----CCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence            4555433  3566778888776522    3489999999998775321  1      12222223333455579999999


Q ss_pred             cccchhh
Q 025290           80 HDLGFAA   86 (255)
Q Consensus        80 HE~~~~~   86 (255)
                      ||..-..
T Consensus       119 HD~~p~~  125 (296)
T cd00842         119 HDSYPVN  125 (296)
T ss_pred             CCCCccc
Confidence            9976443

Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but

>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed

Probab=96.17  E-value=0.013  Score=62.61  Aligned_cols=66  Identities=18%  Similarity=0.232  Sum_probs=47.1

Q ss_pred             CeEEEEccCCCC---HHHHHHHHHHhhhccCCCCCCCcEEEE-eCCcCCCCCCh-----HHHHHHHHhCCCCCCCCcEEE
Q 025290            5 RRVCCIGDVHGY---ISKLQNLWKNLETHIGPSDFNSAIIIF-LGDYCDRGPNT-----REVIDFLISLPTKYPNQKHVF   75 (255)
Q Consensus         5 ~ri~vigDIHG~---~~~l~~lL~~~~~~~~~~~~~~d~li~-lGDlvDrG~~s-----~~vl~~l~~l~~~~p~~~v~~   75 (255)
                      .+|+.++|+||.   +..+..+++.++...+      +.+++ .||+++..+.+     ..+++.+..+...      ..
T Consensus       661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~------~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~d------~~  728 (1163)
T PRK09419        661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENP------NTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGYD------AS  728 (1163)
T ss_pred             EEEEEEeecccCCCCHHHHHHHHHHHHhhCC------CeEEEecCCCCCCcchhhhcCChHHHHHHhCcCCC------EE
Confidence            589999999987   4566667777665432      44544 99999877643     3577777776542      46


Q ss_pred             ECCCccc
Q 025290           76 LSGNHDL   82 (255)
Q Consensus        76 i~GNHE~   82 (255)
                      +.||||+
T Consensus       729 ~~GNHEf  735 (1163)
T PRK09419        729 TFGNHEF  735 (1163)
T ss_pred             Eeccccc
Confidence            8999995

>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain

Probab=96.17  E-value=0.02  Score=51.47  Aligned_cols=67  Identities=18%  Similarity=0.240  Sum_probs=45.3

Q ss_pred             eEEEEccCCCC---------------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHH
Q 025290            6 RVCCIGDVHGY---------------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-----TREVID   59 (255)
Q Consensus         6 ri~vigDIHG~---------------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~   59 (255)
                      +|+.++|+||.                     +..+..+++.++...+     ...++..||++...+.     ...+++
T Consensus         2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~-----~~l~ld~GD~~~gs~~~~~~~g~~~~~   76 (281)
T cd07409           2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENP-----NVLFLNAGDAFQGTLWYTLYKGNADAE   76 (281)
T ss_pred             EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCC-----CEEEEeCCCCCCCcchhhhcCChHHHH
Confidence            68999999976                     4556667777665422     3456669999987653     355677


Q ss_pred             HHHhCCCCCCCCcEEEECCCcccc
Q 025290           60 FLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        60 ~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .+..+..     .+ +..||||..
T Consensus        77 ~ln~~g~-----D~-~~lGNHefd   94 (281)
T cd07409          77 FMNLLGY-----DA-MTLGNHEFD   94 (281)
T ss_pred             HHHhcCC-----CE-EEecccccc
Confidence            7776654     24 456999964

CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si

>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain

Probab=96.10  E-value=0.024  Score=50.61  Aligned_cols=68  Identities=21%  Similarity=0.275  Sum_probs=51.8

Q ss_pred             eEEEEccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-CChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            6 RVCCIGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-PNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         6 ri~vigDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      ||++||||=|.  ...+...|..++.+..     .|.+|..||..-.| ..+.++.+.+..+..     .+.. .|||++
T Consensus         1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~-----~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~-----D~iT-lGNH~f   69 (255)
T cd07382           1 KILFIGDIVGKPGRKAVKEHLPKLKKEYK-----IDFVIANGENAAGGKGITPKIAKELLSAGV-----DVIT-MGNHTW   69 (255)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHHHHHHCC-----CCEEEECCccccCCCCCCHHHHHHHHhcCC-----CEEE-eccccc
Confidence            68999999998  4566777877765432     58899999998766 467899999999875     3544 499985


Q ss_pred             ch
Q 025290           83 GF   84 (255)
Q Consensus        83 ~~   84 (255)
                      -.
T Consensus        70 D~   71 (255)
T cd07382          70 DK   71 (255)
T ss_pred             Cc
Confidence            43

DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.

>cd08162 MPP_PhoA_N Synechococcus sp

Probab=95.66  E-value=0.036  Score=50.84  Aligned_cols=70  Identities=20%  Similarity=0.315  Sum_probs=46.9

Q ss_pred             eEEEEccCCCCH------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-------------hHHHHHHHHhCCC
Q 025290            6 RVCCIGDVHGYI------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-------------TREVIDFLISLPT   66 (255)
Q Consensus         6 ri~vigDIHG~~------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-------------s~~vl~~l~~l~~   66 (255)
                      +|+.+.|+||++      ..+..+++.++....+ ..++..++..||.+..++.             ...+++++..+..
T Consensus         2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~-~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~   80 (313)
T cd08162           2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAA-EYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV   80 (313)
T ss_pred             eEEEecccccCccccCCHHHHHHHHHHHHHhhhc-cCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC
Confidence            588999999984      4555566666543100 0124678889999986553             3466778877765


Q ss_pred             CCCCCcEEEECCCccc
Q 025290           67 KYPNQKHVFLSGNHDL   82 (255)
Q Consensus        67 ~~p~~~v~~i~GNHE~   82 (255)
                      .      ....||||+
T Consensus        81 D------a~tlGNHEF   90 (313)
T cd08162          81 Q------AIALGNHEF   90 (313)
T ss_pred             c------EEecccccc
Confidence            3      467999995

strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat

>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]

Probab=95.37  E-value=0.048  Score=50.43  Aligned_cols=43  Identities=21%  Similarity=0.288  Sum_probs=26.7

Q ss_pred             CcEEEEeCCcCCCCCChHHHHHHHHhC---CCCCCCCcEEEECCCccc
Q 025290           38 SAIIIFLGDYCDRGPNTREVIDFLISL---PTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus        38 ~d~li~lGDlvDrG~~s~~vl~~l~~l---~~~~p~~~v~~i~GNHE~   82 (255)
                      .|.+||+||.|+. .........+++.   .+.+ +..-..+.||||.
T Consensus       101 PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~-~IPwA~~lGNHDd  146 (379)
T KOG1432|consen  101 PDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR-KIPWAAVLGNHDD  146 (379)
T ss_pred             CCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc-CCCeEEEeccccc
Confidence            4999999999995 4443333333322   1111 2346789999985

>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed

Probab=94.98  E-value=0.068  Score=53.84  Aligned_cols=69  Identities=20%  Similarity=0.260  Sum_probs=49.0

Q ss_pred             CCeEEEEccCCCCH----------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH------------
Q 025290            4 PRRVCCIGDVHGYI----------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR------------   55 (255)
Q Consensus         4 ~~ri~vigDIHG~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~------------   55 (255)
                      ..+|+.++|+||++                ..+..++++++...+     +..++-.||++...|.+-            
T Consensus        25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~-----n~llvD~GD~~qGsp~~~~~~~~~~~~g~~   99 (649)
T PRK09420         25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAK-----NSVLVDNGDLIQGSPLGDYMAAKGLKAGDV   99 (649)
T ss_pred             eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCC-----CEEEEECCCcCCCchhhhhhhhccccCCCc
Confidence            46899999999985                345567777765432     467888999998666431            


Q ss_pred             -HHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290           56 -EVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        56 -~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                       .+++.+..+...      ....||||+.
T Consensus       100 ~p~i~amN~lgyD------a~tlGNHEFd  122 (649)
T PRK09420        100 HPVYKAMNTLDYD------VGNLGNHEFN  122 (649)
T ss_pred             chHHHHHHhcCCc------EEeccchhhh
Confidence             367777777653      4689999953

>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain

Probab=94.94  E-value=0.059  Score=48.77  Aligned_cols=73  Identities=15%  Similarity=0.228  Sum_probs=44.2

Q ss_pred             CCeEEEEccCCCCHH-------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-------hHHHHHHHHh
Q 025290            4 PRRVCCIGDVHGYIS-------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-------TREVIDFLIS   63 (255)
Q Consensus         4 ~~ri~vigDIHG~~~-------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-------s~~vl~~l~~   63 (255)
                      ..+|+.++|+||.+.             .+.++++.++..... ..++..++-.||.+...+.       ...+++++..
T Consensus         5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~-~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~   83 (282)
T cd07407           5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQ-KGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRM   83 (282)
T ss_pred             eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHh-cCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHh
Confidence            457899999998753             223343333221000 0023456679999986543       2446777777


Q ss_pred             CCCCCCCCcEEEECCCcccc
Q 025290           64 LPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        64 l~~~~p~~~v~~i~GNHE~~   83 (255)
                      +...      ....||||..
T Consensus        84 mgyD------a~tlGNHEFd   97 (282)
T cd07407          84 MPYD------LLTIGNHELY   97 (282)
T ss_pred             cCCc------EEeecccccC
Confidence            7653      5789999984

YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at

>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain

Probab=94.90  E-value=0.084  Score=47.65  Aligned_cols=71  Identities=14%  Similarity=0.198  Sum_probs=44.7

Q ss_pred             eEEEEccCCCCH----------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHHHHHhCCCCCCC
Q 025290            6 RVCCIGDVHGYI----------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-----TREVIDFLISLPTKYPN   70 (255)
Q Consensus         6 ri~vigDIHG~~----------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~~l~~l~~~~p~   70 (255)
                      +|+.++|+||.+          ..+..++++++..... ..++..++-.||++...+.     ...+++.+..+...   
T Consensus         2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~-~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D---   77 (285)
T cd07405           2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAA-QGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD---   77 (285)
T ss_pred             EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhc-cCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc---
Confidence            589999999974          3355677666543110 0124577789999964442     24566777777652   


Q ss_pred             CcEEEECCCcccc
Q 025290           71 QKHVFLSGNHDLG   83 (255)
Q Consensus        71 ~~v~~i~GNHE~~   83 (255)
                        + ...||||+-
T Consensus        78 --a-~~~GNHEfD   87 (285)
T cd07405          78 --A-MAVGNHEFD   87 (285)
T ss_pred             --E-Eeecccccc
Confidence              3 455999954

UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs

>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase

Probab=94.88  E-value=0.071  Score=53.49  Aligned_cols=68  Identities=21%  Similarity=0.273  Sum_probs=47.2

Q ss_pred             CeEEEEccCCCCHH----------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-------------H
Q 025290            5 RRVCCIGDVHGYIS----------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-------------R   55 (255)
Q Consensus         5 ~ri~vigDIHG~~~----------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-------------~   55 (255)
                      .+|+.++|+||++.                .+..++++++...+     +..++-.||++...|.+             .
T Consensus         3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~-----n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~   77 (626)
T TIGR01390         3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVK-----NSVLVDNGDLIQGSPLGDYMAAQGLKAGQMH   77 (626)
T ss_pred             EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCC-----CeEEEECCCcCCCccchhhhhhccccCCCcC
Confidence            58999999999853                45556776654332     46788899999866533             2


Q ss_pred             HHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290           56 EVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        56 ~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .+++.+..+..-      ....||||+.
T Consensus        78 p~~~~mN~lgyD------a~tlGNHEFd   99 (626)
T TIGR01390        78 PVYKAMNLLKYD------VGNLGNHEFN   99 (626)
T ss_pred             hHHHHHhhcCcc------EEeccccccc
Confidence            366777776642      4689999953

2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a

>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]

Probab=94.82  E-value=0.023  Score=54.35  Aligned_cols=46  Identities=28%  Similarity=0.447  Sum_probs=38.6

Q ss_pred             CcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccchhhhhc
Q 025290           38 SAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFAAFVG   89 (255)
Q Consensus        38 ~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~~~~   89 (255)
                      .|++-++||+.||||.+-.+++.|..+.      .+-+--||||..++..+.
T Consensus       191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh------svDiQWGNHDilWmgA~s  236 (648)
T COG3855         191 VDHLHIVGDIYDRGPYPDKIMDTLINYH------SVDIQWGNHDILWMGAAS  236 (648)
T ss_pred             hhheeeecccccCCCCchHHHHHHhhcc------cccccccCcceEEeeccc
Confidence            4889999999999999999999999876      356779999987665543

>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN

Probab=94.53  E-value=0.13  Score=50.86  Aligned_cols=67  Identities=19%  Similarity=0.247  Sum_probs=45.8

Q ss_pred             eEEEEccCCCCHH---------------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-----HHHHH
Q 025290            6 RVCCIGDVHGYIS---------------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-----REVID   59 (255)
Q Consensus         6 ri~vigDIHG~~~---------------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-----~~vl~   59 (255)
                      .|+.+.|+||++.                     .+..++++++...+     +..++..||.+...+.+     ...++
T Consensus         2 tILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~-----n~l~ldaGD~~~gs~~~~~~~g~~~i~   76 (550)
T TIGR01530         2 SIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESK-----NALVLHAGDAIIGTLYFTLFGGRADAA   76 (550)
T ss_pred             EEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCC-----CeEEEECCCCCCCccchhhcCCHHHHH
Confidence            5889999998743                     34455666654432     46788899999765533     45677


Q ss_pred             HHHhCCCCCCCCcEEEECCCcccc
Q 025290           60 FLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        60 ~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .+..+...      ....||||+-
T Consensus        77 ~~N~~g~D------a~~lGNHEFd   94 (550)
T TIGR01530        77 LMNAAGFD------FFTLGNHEFD   94 (550)
T ss_pred             HHhccCCC------EEEecccccc
Confidence            77776642      5789999964

This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.

>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed

Probab=94.26  E-value=0.13  Score=53.13  Aligned_cols=68  Identities=19%  Similarity=0.211  Sum_probs=47.3

Q ss_pred             CeEEEEccCCCCHH----------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--------------
Q 025290            5 RRVCCIGDVHGYIS----------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--------------   54 (255)
Q Consensus         5 ~ri~vigDIHG~~~----------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--------------   54 (255)
                      .+|+.+.|+||++.                .+..+++.++...     ++..++-.||++...|.+              
T Consensus       116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~-----~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~  190 (814)
T PRK11907        116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKEN-----PNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQ  190 (814)
T ss_pred             EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhC-----CCEEEEecCCCCCCCcccchhhhccccccCcc
Confidence            58999999999853                3444666665433     246788899999865432              


Q ss_pred             HHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290           55 REVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        55 ~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      ..+++.+..+...      ....||||+.
T Consensus       191 ~P~i~amN~LGyD------A~tLGNHEFD  213 (814)
T PRK11907        191 HPMYAALEALGFD------AGTLGNHEFN  213 (814)
T ss_pred             hHHHHHHhccCCC------EEEechhhcc
Confidence            1367777777653      4789999953

>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed

Probab=94.19  E-value=0.1  Score=55.87  Aligned_cols=67  Identities=21%  Similarity=0.301  Sum_probs=45.7

Q ss_pred             CeEEEEccCCCCH----------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC--------------h
Q 025290            5 RRVCCIGDVHGYI----------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN--------------T   54 (255)
Q Consensus         5 ~ri~vigDIHG~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~--------------s   54 (255)
                      .+|+.++|+||++                ..+..+++.++...+     +..++-.||++...|.              .
T Consensus        42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~-----n~llld~GD~~qGs~l~~~~~~~~~~~~~~~  116 (1163)
T PRK09419         42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENP-----NTLLVDNGDLIQGNPLGEYAVKDNILFKNKT  116 (1163)
T ss_pred             EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCC-----CeEEEeCCCccCCChhhhHHhhhccccCCCc
Confidence            5799999999975                445567777665432     3455559999986651              2


Q ss_pred             HHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290           55 REVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus        55 ~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      ..+++.+..+...      ....||||+
T Consensus       117 ~~~i~~mN~lgyD------a~~lGNHEF  138 (1163)
T PRK09419        117 HPMIKAMNALGYD------AGTLGNHEF  138 (1163)
T ss_pred             CHHHHHHhhcCcc------EEeeccccc
Confidence            3566777666542      467999996

>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]

Probab=94.19  E-value=0.11  Score=50.73  Aligned_cols=69  Identities=22%  Similarity=0.405  Sum_probs=49.5

Q ss_pred             CCeEEEEccCCCCHH---------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCC------ChHHHHHHHH
Q 025290            4 PRRVCCIGDVHGYIS---------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGP------NTREVIDFLI   62 (255)
Q Consensus         4 ~~ri~vigDIHG~~~---------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~------~s~~vl~~l~   62 (255)
                      ..+|+.+.|+||.+.               ....++++++....     +..++-.||+++..+      .....++.+.
T Consensus        26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~-----~~llld~GD~~~G~~l~~~~~~g~~~~~~mN  100 (517)
T COG0737          26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENK-----NVLLLDAGDLIQGSPLSDYLTKGEPTVDLLN  100 (517)
T ss_pred             eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcC-----CeEEEeCCcccCCccccccccCCChHHHHHh
Confidence            358899999999988               44455566554432     467888999999744      3356788888


Q ss_pred             hCCCCCCCCcEEEECCCcccc
Q 025290           63 SLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        63 ~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .+.-.      ....||||..
T Consensus       101 ~m~yD------a~tiGNHEFd  115 (517)
T COG0737         101 ALGYD------AMTLGNHEFD  115 (517)
T ss_pred             hcCCc------EEeecccccc
Confidence            87753      4678999964

>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]

Probab=93.60  E-value=0.18  Score=49.18  Aligned_cols=52  Identities=15%  Similarity=0.258  Sum_probs=40.3

Q ss_pred             CCeEEEEccCC----------C--CHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHH
Q 025290            4 PRRVCCIGDVH----------G--YISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFL   61 (255)
Q Consensus         4 ~~ri~vigDIH----------G--~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l   61 (255)
                      .+||+|.+|+|          |  .+..|+++|+.+....      .|.|++-||++.-..-|+.+|..+
T Consensus        13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~------VDmiLlGGDLFHeNkPSr~~L~~~   76 (646)
T KOG2310|consen   13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQEND------VDMILLGGDLFHENKPSRKTLHRC   76 (646)
T ss_pred             ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcC------CcEEEecCcccccCCccHHHHHHH
Confidence            47999999999          2  3678899999887654      499999999998766666544333

>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast

Probab=93.54  E-value=0.1  Score=44.51  Aligned_cols=73  Identities=18%  Similarity=0.308  Sum_probs=38.2

Q ss_pred             EEEEccCCCC-----HHHHHHHHHHhh-hccCCCCCCCcEEEEeCCcCCCCCCh-------------HHHHHHHHh-CCC
Q 025290            7 VCCIGDVHGY-----ISKLQNLWKNLE-THIGPSDFNSAIIIFLGDYCDRGPNT-------------REVIDFLIS-LPT   66 (255)
Q Consensus         7 i~vigDIHG~-----~~~l~~lL~~~~-~~~~~~~~~~d~li~lGDlvDrG~~s-------------~~vl~~l~~-l~~   66 (255)
                      |+++||+|-.     ++.|.++|+.+. ..      ..+.+|++|+++|.-...             ...+..+.+ +..
T Consensus         1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~------~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (209)
T PF04042_consen    1 IVFASGPFLDSDNLSLEPLRDLLSGVEDAS------KPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLES   74 (209)
T ss_dssp             EEEEES--CTTT-HHHHHHHHHHHCCCHCT------TECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCC
T ss_pred             CEEEecCccCCCHhHHHHHHHHHHhccccC------CCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhh
Confidence            6789999844     455556665554 22      248999999999952211             111111111 122


Q ss_pred             CCCCCcEEEECCCcccchh
Q 025290           67 KYPNQKHVFLSGNHDLGFA   85 (255)
Q Consensus        67 ~~p~~~v~~i~GNHE~~~~   85 (255)
                      ..+..++++|+|+||-...
T Consensus        75 i~~~~~vvlvPg~~D~~~~   93 (209)
T PF04042_consen   75 ILPSTQVVLVPGPNDPTSS   93 (209)
T ss_dssp             CHCCSEEEEE--TTCTT-S
T ss_pred             cccccEEEEeCCCcccccc
Confidence            2234589999999997655

In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.

>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]

Probab=93.47  E-value=0.24  Score=46.23  Aligned_cols=75  Identities=24%  Similarity=0.429  Sum_probs=47.3

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCC-C-C---------CChHHHHHHHHhCC--CCCCCC
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCD-R-G---------PNTREVIDFLISLP--TKYPNQ   71 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvD-r-G---------~~s~~vl~~l~~l~--~~~p~~   71 (255)
                      |||.|-|--||.++.+=+-+..+....   +.+-|.++++||+=. | +         |.-...=+|..-..  ..+| .
T Consensus         1 MrIaVqGCcHG~Ld~iYkti~~~ek~~---~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~AP-V   76 (456)
T KOG2863|consen    1 MRIAVQGCCHGELDNIYKTISLIEKRG---NTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAP-V   76 (456)
T ss_pred             CceeeecccchhHHHHHHHHHHHHHcC---CCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCc-e
Confidence            799999999999888865555554331   124699999999932 1 1         11123333333332  2355 2


Q ss_pred             cEEEECCCcccc
Q 025290           72 KHVFLSGNHDLG   83 (255)
Q Consensus        72 ~v~~i~GNHE~~   83 (255)
                      -.++|-||||.+
T Consensus        77 lTIFIGGNHEAs   88 (456)
T KOG2863|consen   77 LTIFIGGNHEAS   88 (456)
T ss_pred             eEEEecCchHHH
Confidence            457899999975

>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed

Probab=93.31  E-value=0.24  Score=50.98  Aligned_cols=68  Identities=16%  Similarity=0.231  Sum_probs=46.2

Q ss_pred             CCeEEEEccCCCCHH----------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-------------
Q 025290            4 PRRVCCIGDVHGYIS----------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-------------   54 (255)
Q Consensus         4 ~~ri~vigDIHG~~~----------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-------------   54 (255)
                      ..+|+.++|+||++.                .+..++++++...     ++..++-.||++-..|.+             
T Consensus        39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~-----~ntlllD~GD~iqGspl~~~~~~~~~~~~~~  113 (780)
T PRK09418         39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEA-----KNSVLFDDGDALQGTPLGDYVANKINDPKKP  113 (780)
T ss_pred             EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhC-----CCeEEEECCCCCCCchHHHHHhhcccccccc
Confidence            358999999999852                2444666665432     246888899999654432             


Q ss_pred             ------HHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290           55 ------REVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus        55 ------~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                            ..+++++..+...      ....||||+
T Consensus       114 ~~~~~~~p~i~~mN~lgyD------a~tlGNHEF  141 (780)
T PRK09418        114 VDPSYTHPLYRLMNLMKYD------VISLGNHEF  141 (780)
T ss_pred             cccccchHHHHHHhccCCC------EEecccccc
Confidence                  2466777777653      468999995

>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed

Probab=93.04  E-value=0.2  Score=49.36  Aligned_cols=73  Identities=15%  Similarity=0.202  Sum_probs=44.9

Q ss_pred             CCeEEEEccCCCCHH----------HHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-----HHHHHHHHhCCCCC
Q 025290            4 PRRVCCIGDVHGYIS----------KLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-----REVIDFLISLPTKY   68 (255)
Q Consensus         4 ~~ri~vigDIHG~~~----------~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-----~~vl~~l~~l~~~~   68 (255)
                      ...|+.++|+||.+.          .+..+++..+....+ ..++..++..||++...+.+     ..+++.+..+... 
T Consensus        34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~-~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~D-  111 (551)
T PRK09558         34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAA-EGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYD-  111 (551)
T ss_pred             EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhc-cCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCC-
Confidence            357899999999753          334455555432000 01246778899998754422     3467777777642 


Q ss_pred             CCCcEEEECCCcccc
Q 025290           69 PNQKHVFLSGNHDLG   83 (255)
Q Consensus        69 p~~~v~~i~GNHE~~   83 (255)
                          + ...||||+-
T Consensus       112 ----a-~tlGNHEFD  121 (551)
T PRK09558        112 ----A-MAVGNHEFD  121 (551)
T ss_pred             ----E-EcccccccC
Confidence                3 456999954

>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain

Probab=92.80  E-value=0.44  Score=42.64  Aligned_cols=75  Identities=19%  Similarity=0.266  Sum_probs=43.1

Q ss_pred             EEEEccCC-CC----HHHHHHHHHHhhhccCCCC-----CCCcEEEEeCCcCCCCCCh------------------HHHH
Q 025290            7 VCCIGDVH-GY----ISKLQNLWKNLETHIGPSD-----FNSAIIIFLGDYCDRGPNT------------------REVI   58 (255)
Q Consensus         7 i~vigDIH-G~----~~~l~~lL~~~~~~~~~~~-----~~~d~li~lGDlvDrG~~s------------------~~vl   58 (255)
                      |++|||+| |.    ..+++.+.+.+........     ..-.++|+.||.|+.-...                  .+-+
T Consensus         2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (257)
T cd07387           2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV   81 (257)
T ss_pred             EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence            78999999 32    3445555565543321100     0124899999999854211                  1112


Q ss_pred             ----HHHHhCCCCCCCCcEEEECCCcccch
Q 025290           59 ----DFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus        59 ----~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                          .++.++...   ..|.+++||||-.-
T Consensus        82 ~~ld~~l~~l~~~---i~V~imPG~~Dp~~  108 (257)
T cd07387          82 KELDNFLSQLASS---VPVDLMPGEFDPAN  108 (257)
T ss_pred             HHHHHHHHhhhcC---CeEEECCCCCCccc
Confidence                334444433   35889999999643

PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily

>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]

Probab=92.65  E-value=0.4  Score=46.29  Aligned_cols=79  Identities=22%  Similarity=0.191  Sum_probs=44.4

Q ss_pred             CeEEEEccCCC-C----HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-CC-----------hHHHHHHHHhCCCC
Q 025290            5 RRVCCIGDVHG-Y----ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-PN-----------TREVIDFLISLPTK   67 (255)
Q Consensus         5 ~ri~vigDIHG-~----~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-~~-----------s~~vl~~l~~l~~~   67 (255)
                      .++++|||||= .    -+++..+++.++.... ....-.-+++.||+||.. -+           ..+-++.+.++-.+
T Consensus       226 v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~-~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~  304 (481)
T COG1311         226 VYVALISDIHRGSKEFLEDEFEKFIDWLNGPGD-LASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQ  304 (481)
T ss_pred             eEEEEEeeeecccHHHHHHHHHHHHHHhcCCcc-cccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhh
Confidence            36899999994 3    3445556666543221 011225788899999942 11           12223333332222


Q ss_pred             CC-CCcEEEECCCcccch
Q 025290           68 YP-NQKHVFLSGNHDLGF   84 (255)
Q Consensus        68 ~p-~~~v~~i~GNHE~~~   84 (255)
                      -| ...+++.+||||..-
T Consensus       305 vp~~I~v~i~PGnhDa~r  322 (481)
T COG1311         305 VPEHIKVFIMPGNHDAVR  322 (481)
T ss_pred             CCCCceEEEecCCCCccc
Confidence            22 346888999999753

>KOG2476 consensus Uncharacterized conserved protein [Function unknown]

Probab=91.06  E-value=0.96  Score=43.51  Aligned_cols=71  Identities=20%  Similarity=0.357  Sum_probs=51.4

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNH   80 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNH   80 (255)
                      ..||+|+||+-|+++.+-+-++.+.....    +-|.+|++|++++......+++++....+. .| ..+|++-+|-
T Consensus         5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~G----pFd~liCvGnfF~~~~~~~e~~~ykng~~~-vP-iptY~~g~~~   75 (528)
T KOG2476|consen    5 DAKILVCGDVEGRFDELIKRIQKVNKKSG----PFDLLICVGNFFGHDTQNAEVEKYKNGTKK-VP-IPTYFLGDNA   75 (528)
T ss_pred             CceEEEEcCccccHHHHHHHHHHHhhcCC----CceEEEEecccCCCccchhHHHHHhcCCcc-Cc-eeEEEecCCC
Confidence            45999999999999888776666655433    469999999999875567788888776543 33 2456555554

>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]

Probab=90.29  E-value=0.23  Score=44.46  Aligned_cols=75  Identities=19%  Similarity=0.272  Sum_probs=48.0

Q ss_pred             chhhhhcCCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCC
Q 025290          156 APTFESYGVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRV  235 (255)
Q Consensus       156 ~~tl~sy~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~  235 (255)
                      +++++.||..        .+..-.-+.+.-+|+...++.            +++..|||+.|.....++...+ .|.-..
T Consensus       141 declRkyg~a--------nvw~~Ftdlfdy~P~tali~~------------~ifc~HGgLspsi~tld~~r~~-dr~~ev  199 (319)
T KOG0371|consen  141 DECLRKYGNA--------NVWKYFTDLFDYLPLTALIES------------KIFCLHGGLSPSIDTLDLIRLL-DRIQEV  199 (319)
T ss_pred             HHHHhhcccc--------cchHHhhhhhhccchHhhhcc------------ceeeccCCcCcccchHHHHHHH-HHhhcc
Confidence            5666666532        233445566677788776662            8999999999998877777754 222222


Q ss_pred             CchhhccCCccccCCCcc
Q 025290          236 PKVEALSGRKNVWDIPEV  253 (255)
Q Consensus       236 ~~~~~~~~~~~~w~~~~~  253 (255)
                      |-  .+-.-+.+|++|+.
T Consensus       200 ph--egpmcDlLwsdpdd  215 (319)
T KOG0371|consen  200 PH--EGPMCDLLWSDPDD  215 (319)
T ss_pred             cC--CCChhheeccCccc
Confidence            22  22233889999974

>PTZ00422 glideosome-associated protein 50; Provisional

Probab=90.04  E-value=0.64  Score=44.11  Aligned_cols=71  Identities=11%  Similarity=0.115  Sum_probs=42.0

Q ss_pred             CeEEEEccCCCCHHHHH---HHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH------HHHHHHHhCCC--CCCCCcE
Q 025290            5 RRVCCIGDVHGYISKLQ---NLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR------EVIDFLISLPT--KYPNQKH   73 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~---~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~------~vl~~l~~l~~--~~p~~~v   73 (255)
                      .|++++||-=.....-.   +.+..+....     +.+.++.+||.++.|..+.      +..+.+..-..  .  ....
T Consensus        27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~-----~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L--~~Pw   99 (394)
T PTZ00422         27 LRFASLGNWGTGSKQQKLVASYLKQYAKNE-----RVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDM--QIPF   99 (394)
T ss_pred             EEEEEEecCCCCchhHHHHHHHHHHHHHhC-----CCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhh--CCCe
Confidence            48899999653322222   2333332222     3589999999998887653      33344432211  1  1258


Q ss_pred             EEECCCccc
Q 025290           74 VFLSGNHDL   82 (255)
Q Consensus        74 ~~i~GNHE~   82 (255)
                      +.|+||||.
T Consensus       100 y~vLGNHDy  108 (394)
T PTZ00422        100 FTVLGQADW  108 (394)
T ss_pred             EEeCCcccc
Confidence            999999996

>KOG3947 consensus Phosphoesterases [General function prediction only]

Probab=89.87  E-value=0.31  Score=43.95  Aligned_cols=68  Identities=31%  Similarity=0.579  Sum_probs=45.2

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      ..|.++|||.|+......        +.+    ..|.++.+||+..-|. +.+|..+=..+... |-..-+.|.||||..
T Consensus        61 ~~r~VcisdtH~~~~~i~--------~~p----~gDvlihagdfT~~g~-~~ev~~fn~~~gsl-ph~yKIVIaGNHELt  126 (305)
T KOG3947|consen   61 YARFVCISDTHELTFDIN--------DIP----DGDVLIHAGDFTNLGL-PEEVIKFNEWLGSL-PHEYKIVIAGNHELT  126 (305)
T ss_pred             ceEEEEecCcccccCccc--------cCC----CCceEEeccCCccccC-HHHHHhhhHHhccC-cceeeEEEeecccee
Confidence            358999999999855432        111    3588999999987664 56666655544321 212347899999976


Q ss_pred             hh
Q 025290           84 FA   85 (255)
Q Consensus        84 ~~   85 (255)
                      +-
T Consensus       127 Fd  128 (305)
T KOG3947|consen  127 FD  128 (305)
T ss_pred             ec
Confidence            54

>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]

Probab=89.84  E-value=0.5  Score=45.40  Aligned_cols=73  Identities=19%  Similarity=0.323  Sum_probs=41.6

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh----HHHHHHHHhCCCCCCCCcEEEECCC
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT----REVIDFLISLPTKYPNQKHVFLSGN   79 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s----~~vl~~l~~l~~~~p~~~v~~i~GN   79 (255)
                      +.+++++||+=-.. .-...+.......     ..|.++++||+...-..+    -+-.+++..+...-|   -.++.||
T Consensus       147 ~~~~~i~GDlG~~~-~~~s~~~~~~~~~-----k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vP---ymv~~GN  217 (452)
T KOG1378|consen  147 PTRAAIFGDMGCTE-PYTSTLRNQEENL-----KPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVP---YMVCSGN  217 (452)
T ss_pred             ceeEEEEccccccc-cccchHhHHhccc-----CCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCc---eEEeccc
Confidence            46899999984322 2222222222211     148999999997332222    234444444444444   6788999


Q ss_pred             cccchh
Q 025290           80 HDLGFA   85 (255)
Q Consensus        80 HE~~~~   85 (255)
                      ||.-..
T Consensus       218 HE~d~~  223 (452)
T KOG1378|consen  218 HEIDWP  223 (452)
T ss_pred             ccccCC
Confidence            997655

>COG1692 Calcineurin-like phosphoesterase [General function prediction only]

Probab=88.56  E-value=2.1  Score=38.09  Aligned_cols=70  Identities=23%  Similarity=0.321  Sum_probs=51.6

Q ss_pred             CeEEEEccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-hHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290            5 RRVCCIGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-TREVIDFLISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         5 ~ri~vigDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s~~vl~~l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      ||+++||||-|.  ...+...|..+..+.     .-|.+|..|.-.-.|-. ..++.+.+.+....      ++-+|||-
T Consensus         1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~ky-----k~dfvI~N~ENaa~G~Git~k~y~~l~~~G~d------viT~GNH~   69 (266)
T COG1692           1 MRILFIGDVVGKPGRKAVKEHLPQLKSKY-----KIDFVIVNGENAAGGFGITEKIYKELLEAGAD------VITLGNHT   69 (266)
T ss_pred             CeEEEEecccCcchHHHHHHHhHHHHHhh-----cCcEEEEcCccccCCcCCCHHHHHHHHHhCCC------EEeccccc
Confidence            799999999998  456666676665443     24889999998876664 67888888887652      45799996


Q ss_pred             cchh
Q 025290           82 LGFA   85 (255)
Q Consensus        82 ~~~~   85 (255)
                      +..-
T Consensus        70 wd~~   73 (266)
T COG1692          70 WDQK   73 (266)
T ss_pred             ccch
Confidence            5433

>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]

Probab=87.70  E-value=0.95  Score=40.96  Aligned_cols=70  Identities=20%  Similarity=0.321  Sum_probs=43.4

Q ss_pred             CCeEEEEcc--CCCCHHHHHHHHHH--hhhccCCCCCCCcEEEEeCCcC-CCCCChH------HHHHHHH---hCCCCCC
Q 025290            4 PRRVCCIGD--VHGYISKLQNLWKN--LETHIGPSDFNSAIIIFLGDYC-DRGPNTR------EVIDFLI---SLPTKYP   69 (255)
Q Consensus         4 ~~ri~vigD--IHG~~~~l~~lL~~--~~~~~~~~~~~~d~li~lGDlv-DrG~~s~------~vl~~l~---~l~~~~p   69 (255)
                      ..+++||||  -+|-+..-+.++..  ++...     .-|.++.+||-+ |.|+.+.      +-.+-+.   .|++   
T Consensus        43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l-----~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQk---  114 (336)
T KOG2679|consen   43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKL-----DIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQK---  114 (336)
T ss_pred             ceEEEEEcccccCCchhHHHHHHHHHhHHHhc-----cceEEEecCCcccccCCCCCCChhHHhhhhhcccCccccc---
Confidence            358999999  67877665555433  33222     358999999986 5665442      2222222   2222   


Q ss_pred             CCcEEEECCCcccc
Q 025290           70 NQKHVFLSGNHDLG   83 (255)
Q Consensus        70 ~~~v~~i~GNHE~~   83 (255)
                        .-+.|.||||..
T Consensus       115 --pWy~vlGNHDyr  126 (336)
T KOG2679|consen  115 --PWYSVLGNHDYR  126 (336)
T ss_pred             --chhhhccCcccc
Confidence              368899999964

>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]

Probab=87.47  E-value=1.3  Score=36.53  Aligned_cols=60  Identities=25%  Similarity=0.445  Sum_probs=43.5

Q ss_pred             CeEEEEccCCC--CH----HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECC
Q 025290            5 RRVCCIGDVHG--YI----SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSG   78 (255)
Q Consensus         5 ~ri~vigDIHG--~~----~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~G   78 (255)
                      |-+.++||+|=  ..    ..|+++|  +   +  +  .-.+++++|.+.     +.+++++++.+..     .+++|||
T Consensus         1 mLvL~lgD~HiP~Ra~~Lp~KFkklL--v---P--g--ki~hilctGNlc-----s~e~~dylk~l~~-----dvhiVrG   61 (183)
T KOG3325|consen    1 MLVLVLGDLHIPHRANDLPAKFKKLL--V---P--G--KIQHILCTGNLC-----SKESYDYLKTLSS-----DVHIVRG   61 (183)
T ss_pred             CEEEEeccccCCccccccCHHHHhcc--C---C--C--ceeEEEEeCCcc-----hHHHHHHHHhhCC-----CcEEEec
Confidence            45789999992  22    3344444  1   1  1  247899999976     7789999999874     6999999


Q ss_pred             Ccccc
Q 025290           79 NHDLG   83 (255)
Q Consensus        79 NHE~~   83 (255)
                      --|..
T Consensus        62 eFD~~   66 (183)
T KOG3325|consen   62 EFDEN   66 (183)
T ss_pred             ccCcc
Confidence            98865

>PTZ00235 DNA polymerase epsilon subunit B; Provisional

Probab=87.42  E-value=2.3  Score=38.67  Aligned_cols=80  Identities=16%  Similarity=0.161  Sum_probs=47.7

Q ss_pred             CCeEEEEccCCC----CHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC----CCh----HHHHHHHHhC-CCCCC-
Q 025290            4 PRRVCCIGDVHG----YISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG----PNT----REVIDFLISL-PTKYP-   69 (255)
Q Consensus         4 ~~ri~vigDIHG----~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG----~~s----~~vl~~l~~l-~~~~p-   69 (255)
                      ..+++++||+|=    -+++|.++++......+... ....+|++|+++...    ..+    .+-.+.+..+ ..++| 
T Consensus        27 ~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~-~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~  105 (291)
T PTZ00235         27 RHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENE-LPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKL  105 (291)
T ss_pred             ceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccC-CCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChH
Confidence            468999999993    36777777776632211111 136899999998753    112    2223333221 11222 


Q ss_pred             ---CCcEEEECCCcccch
Q 025290           70 ---NQKHVFLSGNHDLGF   84 (255)
Q Consensus        70 ---~~~v~~i~GNHE~~~   84 (255)
                         ...+++|+|-.|-+.
T Consensus       106 L~~~s~fVFVPGpnDPw~  123 (291)
T PTZ00235        106 ILEHCYLIFIPGINDPCA  123 (291)
T ss_pred             HHhcCeEEEECCCCCCCc
Confidence               357999999999753

>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]

Probab=81.24  E-value=3  Score=41.32  Aligned_cols=73  Identities=19%  Similarity=0.260  Sum_probs=48.0

Q ss_pred             HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCC--CCCChH-H---HHHHHHhC-CCCCCCCcEEEECCCcccchhhhhcC
Q 025290           18 SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCD--RGPNTR-E---VIDFLISL-PTKYPNQKHVFLSGNHDLGFAAFVGV   90 (255)
Q Consensus        18 ~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvD--rG~~s~-~---vl~~l~~l-~~~~p~~~v~~i~GNHE~~~~~~~~~   90 (255)
                      ..++.+|+.++....    .-|-++.+||++.  +++.+. +   ++..+-++ .+-+|+..|+...||||..-.+....
T Consensus       195 ~lies~L~~ike~~~----~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~  270 (577)
T KOG3770|consen  195 RLIESALDHIKENHK----DIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAP  270 (577)
T ss_pred             HHHHHHHHHHHhcCC----CCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCC
Confidence            456778888876543    2589999999984  555443 2   33333222 23367888999999999887776554


Q ss_pred             CCCC
Q 025290           91 LPEP   94 (255)
Q Consensus        91 ~~~~   94 (255)
                      ...+
T Consensus       271 ~~~~  274 (577)
T KOG3770|consen  271 GSVP  274 (577)
T ss_pred             CCCc
Confidence            3333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	255
1s70_A	330	Complex Between Protein Ser/thr Phosphatase-1 (delt		4e-05
3v4y_A	306	Crystal Structure Of The First Nuclear Pp1 Holoenzy		7e-05
3n5u_B	300	Crystal Structure Of An Rb C-Terminal Peptide Bound		8e-05
3e7a_A	299	Crystal Structure Of Protein Phosphatase-1 Bound To		8e-05
1u32_A	293	Crystal Structure Of A Protein Phosphatase-1: Calci		8e-05
1fjm_A	330	Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isofor		8e-05
4g9j_A	331	Protein SerTHR PHOSPHATASE-1 In Complex With Cell-P		8e-05
1jk7_A	323	Crystal Structure Of The Tumor-Promoter Okadaic Aci		8e-05
2o8a_A	329	Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Leng		9e-05
3egg_A	329	Crystal Structure Of A Complex Between Protein Phos		9e-05
1wao_1	477	Pp5 Structure Length = 477		2e-04
1s95_A	333	Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5		3e-04
3h60_A	315	Catalytic Domain Of Human SerineTHREONINE PHOSPHATA		4e-04
2nyl_C	293	Crystal Structure Of Protein Phosphatase 2a (Pp2a)		4e-04
3p71_C	304	Crystal Structure Of The Complex Of Lcmt-1 And Pp2a		4e-04
3c5w_C	310	Complex Between Pp2a-Specific Methylesterase Pme-1		5e-04
2ie4_C	309	Structure Of The Protein Phosphatase 2a Core Enzyme		5e-04
2ie3_C	309	Structure Of The Protein Phosphatase 2a Core Enzyme		5e-04
1aui_A	521	Human Calcineurin Heterodimer Length = 521		6e-04
1tco_A	375	Ternary Complex Of A Calcineurin A Fragment, Calcin		7e-04
1mf8_A	373	Crystal Structure Of Human Calcineurin Complexed Wi		7e-04
3ll8_A	357	Crystal Structure Of Calcineurin In Complex With Ak		7e-04
2p6b_A	383	Crystal Structure Of Human Calcineurin In Complex W		8e-04
1m63_A	372	Crystal Structure Of Calcineurin-Cyclophilin-Cyclos		8e-04
2jog_A	327	Structure Of The Calcineurin-Nfat Complex Length =		8e-04

>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 330

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P ++C  GD+HG  + L  L+   E    P + N    +FLGDY DRG  + E I  
Sbjct: 57  LEAPLKIC--GDIHGQYTDLLRLF---EYGGFPPEAN---YLFLGDYVDRGKQSLETICL 108
Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L++   KYP +    L GNH+
Sbjct: 109 LLAYKIKYP-ENFFLLRGNHE 128

>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P ++C  GD+HG   +  +L +  E    P + N    +FLGDY DRG  + E I  
Sbjct: 54  LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 105
Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L++   KYP +    L GNH+
Sbjct: 106 LLAYKIKYP-ENFFLLRGNHE 125

>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The Natural Toxin Nodularin-R Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P ++C  GD+HG   +  +L +  E    P + N    +FLGDY DRG  + E I  
Sbjct: 54  LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 105
Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L++   KYP +    L GNH+
Sbjct: 106 LLAYKIKYP-ENFFLLRGNHE 125

>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin Hybrid Bound To Okadaic Acid Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P ++C  GD+HG   +  +L +  E    P + N    +FLGDY DRG  + E I  
Sbjct: 50  LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESNY---LFLGDYVDRGKQSLETICL 101
Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L++   KYP +    L GNH+
Sbjct: 102 LLAYKIKYP-ENFFLLRGNHE 121

>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type 1) Complexed With Microcystin-Lr Toxin Length = 330

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P ++C  GD+HG   +  +L +  E    P + N    +FLGDY DRG  + E I  
Sbjct: 55  LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 106
Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L++   KYP +    L GNH+
Sbjct: 107 LLAYKIKYP-ENFFLLRGNHE 126

>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With Cell-Permeable Peptide Length = 331

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P ++C  GD+HG   +  +L +  E    P + N    +FLGDY DRG  + E I  
Sbjct: 56  LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 107
Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L++   KYP +    L GNH+
Sbjct: 108 LLAYKIKYP-ENFFLLRGNHE 127

>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound To Protein Phosphatase-1 Length = 323

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P ++C  GD+HG   +  +L +  E    P + N    +FLGDY DRG  + E I  
Sbjct: 55  LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 106
Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L++   KYP +    L GNH+
Sbjct: 107 LLAYKIKYP-ENFFLLRGNHE 126

>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P ++C  GD+HG   +  +L +  E    P + N    +FLGDY DRG  + E I  
Sbjct: 61  LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 112
Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L++   KYP +    L GNH+
Sbjct: 113 LLAYKIKYP-ENFFLLRGNHE 132

>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase 1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of Spinophilin Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P ++C  GD+HG   +  +L +  E    P + N    +FLGDY DRG  + E I  
Sbjct: 54  LEAPLKIC--GDIHG---QYYDLLRLFEYGGFPPESN---YLFLGDYVDRGKQSLETICL 105
Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L++   KYP +    L GNH+
Sbjct: 106 LLAYKIKYP-ENFFLLRGNHE 125

>pdb|1WAO|1 Chain 1, Pp5 Structure Length = 477

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +    ++   GD HG    L N++   E +  PS+ N    IF GD+ DRG  + EVI  
Sbjct: 209 LKETEKITVCGDTHGQFYDLLNIF---ELNGLPSETNP--YIFNGDFVDRGSFSVEVILT 263
Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L      YP+  H+ L GNH+
Sbjct: 264 LFGFKLLYPDHFHL-LRGNHE 283

>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +    ++   GD HG    L N++   E +  PS+ N    IF GD+ DRG  + EVI  
Sbjct: 65  LKETEKITVCGDTHGQFYDLLNIF---ELNGLPSETNP--YIFNGDFVDRGSFSVEVILT 119
Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L      YP+  H+ L GNH+
Sbjct: 120 LFGFKLLYPDHFHL-LRGNHE 139

>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5 (Pp5c)with Two Mn2+ Atoms Length = 315

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +    ++   GD HG    L N++   E +  PS+ N    IF GD+ DRG  + EVI  
Sbjct: 56  LKETEKITVCGDTHGQFYDLLNIF---ELNGLPSETNP--YIFNGDFVDRGSFSVEVILT 110
Query: 61  LISLPTKYPNQKHVFLSGNHD 81
           L      YP+  H+ L GNH+
Sbjct: 111 LFGFKLLYPDHFHL-LRGNHE 130

>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 293

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GDVHG    L  L++     IG    ++  + F+GDY DRG  + E +  L++
Sbjct: 50  PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTNYL-FMGDYVDRGYYSVETVTLLVA 101
Query: 64  LPTKYPNQKHVFLSGNHD 81
           L  +Y  ++   L GNH+
Sbjct: 102 LKVRY-RERITILRGNHE 118

>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a Length = 304

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GDVHG    L  L++     IG    ++  + F+GDY DRG  + E +  L++
Sbjct: 51  PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTNYL-FMGDYVDRGYYSVETVTLLVA 102
Query: 64  LPTKYPNQKHVFLSGNHD 81
           L  +Y  ++   L GNH+
Sbjct: 103 LKVRY-RERITILRGNHE 119

>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And Pp2a Core Enzyme Length = 310

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GDVHG    L  L++     IG    ++  + F+GDY DRG  + E +  L++
Sbjct: 52  PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTNYL-FMGDYVDRGYYSVETVTLLVA 103
Query: 64  LPTKYPNQKHVFLSGNHD 81
           L  +Y  ++   L GNH+
Sbjct: 104 LKVRY-RERITILRGNHE 120

>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Okadaic Acid Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GDVHG    L  L++     IG    ++  + F+GDY DRG  + E +  L++
Sbjct: 51  PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTNYL-FMGDYVDRGYYSVETVTLLVA 102
Query: 64  LPTKYPNQKHVFLSGNHD 81
           L  +Y  ++   L GNH+
Sbjct: 103 LKVRY-RERITILRGNHE 119

>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Tumor- Inducing Toxins Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GDVHG    L  L++     IG    ++  + F+GDY DRG  + E +  L++
Sbjct: 51  PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTNYL-FMGDYVDRGYYSVETVTLLVA 102
Query: 64  LPTKYPNQKHVFLSGNHD 81
           L  +Y  ++   L GNH+
Sbjct: 103 LKVRY-RERITILRGNHE 119

>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer Length = 521

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GD+HG    L  L++     +G S  N+  + FLGDY DRG  + E + +L +
Sbjct: 84  PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 135
Query: 64  LPTKYPNQKHVFLSGNHD 81
           L   YP +    L GNH+
Sbjct: 136 LKILYP-KTLFLLRGNHE 152

>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 375

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GD+HG    L  L++     +G S  N+  + FLGDY DRG  + E + +L +
Sbjct: 67  PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 118
Query: 64  LPTKYPNQKHVFLSGNHD 81
           L   YP +    L GNH+
Sbjct: 119 LKILYP-KTLFLLRGNHE 135

>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 373

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GD+HG    L  L++     +G S  N+  + FLGDY DRG  + E + +L +
Sbjct: 65  PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 116
Query: 64  LPTKYPNQKHVFLSGNHD 81
           L   YP +    L GNH+
Sbjct: 117 LKILYP-KTLFLLRGNHE 133

>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 357

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GD+HG    L  L++     +G S  N+  + FLGDY DRG  + E + +L +
Sbjct: 71  PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 122
Query: 64  LPTKYPNQKHVFLSGNHD 81
           L   YP +    L GNH+
Sbjct: 123 LKILYP-KTLFLLRGNHE 139

>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 383

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GD+HG    L  L++     +G S  N+  + FLGDY DRG  + E + +L +
Sbjct: 87  PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 138
Query: 64  LPTKYPNQKHVFLSGNHD 81
           L   YP +    L GNH+
Sbjct: 139 LKILYP-KTLFLLRGNHE 155

>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin Shows Common But Distinct Recognition Of Immunophilin-Drug Complexes Length = 372

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GD+HG    L  L++     +G S  N+  + FLGDY DRG  + E + +L +
Sbjct: 84  PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 135
Query: 64  LPTKYPNQKHVFLSGNHD 81
           L   YP +    L GNH+
Sbjct: 136 LKILYP-KTLFLLRGNHE 152

>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
           P  VC  GD+HG    L  L++     +G S  N+  + FLGDY DRG  + E + +L +
Sbjct: 64  PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTRYL-FLGDYVDRGYFSIECVLYLWA 115
Query: 64  LPTKYPNQKHVFLSGNHD 81
           L   YP +    L GNH+
Sbjct: 116 LKILYP-KTLFLLRGNHE 132

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	255
2z72_A	342	Protein-tyrosine-phosphatase; cold-active enzyme,	7e-13
1g5b_A	221	Serine/threonine protein phosphatase; bacteriophag	2e-12
2qjc_A	262	Diadenosine tetraphosphatase, putative; putative d	1e-11
1wao_1	477	Serine/threonine protein phosphatase 5; hydrolase,	3e-09
3h63_A	315	Serine/threonine-protein phosphatase 5; metalloenz	3e-09
2dfj_A	280	Diadenosinetetraphosphatase; helices and strands m	1e-08
2ie4_C	309	PP2A-alpha;, serine/threonine-protein phosphatase	1e-08
1nnw_A	252	Hypothetical protein; structural genomics, PSI, pr	2e-08
3e7a_A	299	PP-1A, serine/threonine-protein phosphatase PP1-al	2e-08
1fjm_A	330	Protein serine/threonine phosphatase-1 (alpha ISO	3e-08
1aui_A	521	Calcineurin, serine/threonine phosphatase 2B; hydr	4e-08
3ll8_A	357	Serine/threonine-protein phosphatase 2B catalytic	5e-08
3icf_A	335	PPT, serine/threonine-protein phosphatase T; IRO m	6e-08
3rqz_A	246	Metallophosphoesterase; PSI-biology, midwest cente	9e-07
3qfm_A	270	SAPH, putative uncharacterized protein; sandwich f	2e-06

>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Length = 342

 Score = 66.4 bits (161), Expect = 7e-13
 Identities = 24/118 (20%), Positives = 39/118 (33%), Gaps = 4/118 (3%)

Query: 4   PRRVCCIGDVHGYISKLQNLWK--NLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
            ++V  + DVHG    L  L K   +    G   F    ++  GD  DRG    EV+ F+
Sbjct: 70  IKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFM 129

Query: 62  ISLPTKYPNQKH--VFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWF 117
             L  +  +       L GNH+                +      + Y +    +   
Sbjct: 130 YQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRPYNKLYSADTEI 187

>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 Length = 221

 Score = 63.7 bits (155), Expect = 2e-12
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 2  SRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
          S+ R +  +GD+HG  + L N    +       D    ++I +GD  DRG    E ++ +
Sbjct: 10 SKYRNIWVVGDLHGCYTNLMNKLDTIGF-----DNKKDLLISVGDLVDRGAENVECLELI 64

Query: 62 ISLPTKYPNQKHVFLSGNHDLGFAAF 87
                        + GNH+      
Sbjct: 65 TFP-------WFRAVRGNHEQMMIDG 83

>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} Length = 262

 Score = 62.0 bits (151), Expect = 1e-11
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 16/80 (20%)

Query: 5  RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSA--IIIFLGDYCDRGPNTREVIDFLI 62
           RV  +GD+HG  ++L++L + +        F      ++ +GD  ++GP++  V+  L 
Sbjct: 19 GRVIIVGDIHGCRAQLEDLLRAV-------SFKQGSDTLVAVGDLVNKGPDSFGVVRLLK 71

Query: 63 SLPTKYPNQKHVFLSGNHDL 82
           L           + GNHD 
Sbjct: 72 RL-------GAYSVLGNHDA 84

>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 14/80 (17%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIG--PSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
              VC  GD HG    L N+++     +   PS+ N    IF GD+ DRG  + EVI  L
Sbjct: 214 KITVC--GDTHGQFYDLLNIFE-----LNGLPSETNP--YIFNGDFVDRGSFSVEVILTL 264

Query: 62  ISLPTKYPNQKHVFLS-GNH 80
                 YP+  H  L  GNH
Sbjct: 265 FGFKLLYPD--HFHLLRGNH 282

>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Length = 315

 Score = 55.3 bits (134), Expect = 3e-09
 Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 14/80 (17%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIG--PSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
              VC  GD HG    L N+++     +   PS+ N    IF GD+ DRG  + EVI  L
Sbjct: 61  KITVC--GDTHGQFYDLLNIFE-----LNGLPSETNP--YIFNGDFVDRGSFSVEVILTL 111

Query: 62  ISLPTKYPNQKHVFLS-GNH 80
                 YP+  H  L  GNH
Sbjct: 112 FGFKLLYPD--HFHLLRGNH 129

>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} Length = 280

 Score = 53.6 bits (128), Expect = 1e-08
 Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 15/113 (13%)

Query: 9   CIGDVHGYISKLQNLWKNLETHIGPSDFNSA--IIIFLGDYCDRGPNTREVIDFLISLPT 66
            IGDVHG   +L  L   +       +F      +   GD   RGP + +V+ ++ SL  
Sbjct: 5   LIGDVHGCYDELIALLHKV-------EFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLG- 56

Query: 67  KYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKG 119
                    + GNHDL   A    +             +     +E   W + 
Sbjct: 57  ----DSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEA-PDADELLNWLRR 104

>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Length = 309

 Score = 53.3 bits (129), Expect = 1e-08
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 15/80 (18%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIG--PSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
           P  VC  GDVHG    L  L++     IG    D N    +F+GDY DRG  + E +  L
Sbjct: 51  PVTVC--GDVHGQFHDLMELFR-----IGGKSPDTN---YLFMGDYVDRGYYSVETVTLL 100

Query: 62  ISLPTKYPNQKHVF-LSGNH 80
           ++L  +Y     +  L GNH
Sbjct: 101 VALKVRYRE--RITILRGNH 118

>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A Length = 252

 Score = 52.9 bits (126), Expect = 2e-08
 Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 4/90 (4%)

Query: 6  RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLP 65
           V  + ++ G +  L      +E       +       LG+     P  +EVI+ +  L 
Sbjct: 3  YVAVLANIAGNLPALTAALSRIEEM-REEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLT 61

Query: 66 TKYPNQKHVFLSGNHDLGFAAFVGVLPEPG 95
           K        + G +D   A       +PG
Sbjct: 62 KKE---NVKIIRGKYDQIIAMSDPHATDPG 88

>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Length = 299

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 15/80 (18%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIG--PSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
           P ++C  GD+HG    L  L++      G  P + N    +FLGDY DRG  + E I  L
Sbjct: 57  PLKIC--GDIHGQYYDLLRLFE-----YGGFPPESN---YLFLGDYVDRGKQSLETICLL 106

Query: 62  ISLPTKYPNQKHVF-LSGNH 80
           ++   KYP   + F L GNH
Sbjct: 107 LAYKIKYPE--NFFLLRGNH 124

>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Length = 330

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 15/80 (18%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIG--PSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
           P ++C  GD+HG    L  L++      G  P + N    +FLGDY DRG  + E I  L
Sbjct: 58  PLKIC--GDIHGQYYDLLRLFE-----YGGFPPESN---YLFLGDYVDRGKQSLETICLL 107

Query: 62  ISLPTKYPNQKHVF-LSGNH 80
           ++   KYP   + F L GNH
Sbjct: 108 LAYKIKYPE--NFFLLRGNH 125

>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Length = 521

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 11/81 (13%)

Query: 1   MSRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF 60
           +  P  VC  GD+HG   +  +L K  E    P++      +FLGDY DRG  + E + +
Sbjct: 81  IDAPVTVC--GDIHG---QFFDLMKLFEVGGSPANTR---YLFLGDYVDRGYFSIECVLY 132

Query: 61  LISLPTKYPNQKHVF-LSGNH 80
           L +L   YP    +F L GNH
Sbjct: 133 LWALKILYPK--TLFLLRGNH 151

>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Length = 357

 Score = 51.9 bits (125), Expect = 5e-08
 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 15/80 (18%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIG--PSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
           P  VC  GD+HG    L  L++     +G  P++      +FLGDY DRG  + E + +L
Sbjct: 71  PVTVC--GDIHGQFFDLMKLFE-----VGGSPANTR---YLFLGDYVDRGYFSIECVLYL 120

Query: 62  ISLPTKYPNQKHVF-LSGNH 80
            +L   YP    +F L GNH
Sbjct: 121 WALKILYPK--TLFLLRGNH 138

>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Length = 335

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 10/78 (12%)

Query: 4   PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLIS 63
              VC  GD HG    + NL++                +F GD+ DRG  + EV      
Sbjct: 65  KISVC--GDTHGQFYDVLNLFR-----KFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYC 117

Query: 64  LPTKYPNQKHVFLS-GNH 80
           L   +PN  + FL+ GNH
Sbjct: 118 LKILHPN--NFFLNRGNH 133

>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} Length = 246

 Score = 47.8 bits (113), Expect = 9e-07
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 14/80 (17%)

Query: 2  SRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
          S   R+  I DVH  +  L+ +        G  D     I  LGD    GP  RE ++ +
Sbjct: 1  SNAMRILIISDVHANLVALEAVLS----DAGRVD----DIWSLGDIVGYGPRPRECVELV 52

Query: 62 ISLPTKYPNQKHVFLSGNHD 81
            L        ++ + GNHD
Sbjct: 53 RVLA------PNISVIGNHD 66

>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* Length = 270

 Score = 46.6 bits (110), Expect = 2e-06
 Identities = 18/115 (15%), Positives = 33/115 (28%), Gaps = 15/115 (13%)

Query: 6   RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLP 65
           ++  + D+HG  + L+ +  +                 LGD    G   R ++D L  LP
Sbjct: 13  KIALLSDIHGNTTALEAVLADARQL------GVDEYWLLGDILMPGTGRRRILDLLDQLP 66

Query: 66  TKYPNQKHVFLSGNHD---LGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWF 117
                     + GN +               P      ++     E+    E   
Sbjct: 67  IT------ARVLGNWEDSLWHGVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEV 115

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	255
1fjm_A	330	Protein serine/threonine phosphatase-1 (alpha ISO	99.93
3e7a_A	299	PP-1A, serine/threonine-protein phosphatase PP1-al	99.92
3h63_A	315	Serine/threonine-protein phosphatase 5; metalloenz	99.92
2ie4_C	309	PP2A-alpha;, serine/threonine-protein phosphatase	99.92
3ll8_A	357	Serine/threonine-protein phosphatase 2B catalytic	99.92
3icf_A	335	PPT, serine/threonine-protein phosphatase T; IRO m	99.92
1aui_A	521	Calcineurin, serine/threonine phosphatase 2B; hydr	99.92
2dfj_A	280	Diadenosinetetraphosphatase; helices and strands m	99.9
1wao_1	477	Serine/threonine protein phosphatase 5; hydrolase,	99.89
2qjc_A	262	Diadenosine tetraphosphatase, putative; putative d	99.88
2z72_A	342	Protein-tyrosine-phosphatase; cold-active enzyme,	99.85
1g5b_A	221	Serine/threonine protein phosphatase; bacteriophag	99.79
3rqz_A	246	Metallophosphoesterase; PSI-biology, midwest cente	99.69
3qfm_A	270	SAPH, putative uncharacterized protein; sandwich f	99.68
1nnw_A	252	Hypothetical protein; structural genomics, PSI, pr	99.63
1su1_A	208	Hypothetical protein YFCE; structural genomics, ph	99.31
1uf3_A	228	Hypothetical protein TT1561; metallo-dependent pho	99.23
2yvt_A	260	Hypothetical protein AQ_1956; structural genomics,	99.14
1s3l_A	190	Hypothetical protein MJ0936; phosphodiesterase, nu	99.12
2kkn_A	178	Uncharacterized protein; protein phosphatase 2A ho	98.91
1xm7_A	195	Hypothetical protein AQ_1665; structural genomics,	98.9
3d03_A	274	Phosphohydrolase; glycerophosphodiesterase, metall	98.83
2a22_A	215	Vacuolar protein sorting 29; alpha-beta-BETA-alpha	98.76
3ck2_A	176	Conserved uncharacterized protein (predicted phosp	98.75
1z2w_A	192	Vacuolar protein sorting 29; VPS29, retromer, phos	98.72
2q8u_A	336	Exonuclease, putative; structural genomics, joint	98.66
3ib7_A	330	ICC protein; metallophosphoesterase, alpha-beta fo	98.63
3av0_A	386	DNA double-strand break repair protein MRE11; DNA	98.61
3rl5_A	296	Metallophosphoesterase mpped2; alpha-beta fold, me	98.55
1ii7_A	333	MRE11 nuclease; RAD50, DNA double-strand break rep	98.53
2nxf_A	322	Putative dimetal phosphatase; dinuclear metal cent	98.5
2xmo_A	443	LMO2642 protein; phosphodiesterase, hydrolase; 1.7	98.44
3tho_B	379	Exonuclease, putative; adenosine triphosphate, bac	98.29
4fbw_A	417	DNA repair protein RAD32; DNA double-strand break	98.21
4fbk_A	472	DNA repair and telomere maintenance protein NBS1,	98.19
3t1i_A	431	Double-strand break repair protein MRE11A; DNA rep	98.11
1ute_A	313	Protein (II purple acid phosphatase); tartrate res	97.95
2qfp_A	424	Purple acid phosphatase; binuclear, Fe-Zn, hydrola	97.7
1xzw_A	426	Purple acid phosphatase; hydrolase; HET: NAG FUC M	97.53
3qfk_A	527	Uncharacterized protein; structural genomics, cent	97.29
1t71_A	281	Phosphatase, conserved HYPO; crystal, X-RAY crysta	97.28
3tgh_A	342	Glideosome-associated protein 50; phosphatase fold	97.11
1hp1_A	516	5'-nucleotidase; metallophosphatase, dinuclear, me	97.11
2z1a_A	552	5'-nucleotidase; metal-binding, nucleotide-binding	97.07
3ive_A	509	Nucleotidase; structural genomics, PSI-2, protein	96.95
3ztv_A	579	NAD nucleotidase, NADN; hydrolase, NAD pyrophospha	96.8
4h2g_A	546	5'-nucleotidase; dimer, hydrolase, phosphatase, ex	96.8
3jyf_A	339	2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n	96.53
3gve_A	341	YFKN protein; alpha-beta-BETA-alpha sandwich, stru	96.5
3c9f_A	557	5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p	96.1
1t70_A	255	Phosphatase; crystal, X-RAY crystallography, struc	95.72
4h1s_A	530	5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo	95.67
2z06_A	252	Putative uncharacterized protein TTHA0625; metal b	95.23
2wdc_A	562	SOXB, sulfur oxidation protein SOXB; sulfur-sulfur	94.54
3e0j_A	476	DNA polymerase subunit delta-2; DNA polymerase del	89.78
2yeq_A	527	Apased, PHOD, alkaline phosphatase D; hydrolase, p	88.75

>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3

Probab=99.93  E-value=2.8e-26  Score=209.25  Aligned_cols=156  Identities=25%  Similarity=0.352  Sum_probs=114.5

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .++++|||||||++.+|.++|+.+++..      .+.+||+||+||||+.|.+|+++|..++..+|+ ++++||||||.+
T Consensus        56 ~~~i~viGDIHG~~~~L~~ll~~~g~~~------~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~-~v~~lrGNHE~~  128 (330)
T 1fjm_A           56 EAPLKICGDIHGQYYDLLRLFEYGGFPP------ESNYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECA  128 (330)
T ss_dssp             CSSEEEECBCTTCHHHHHHHHHHHCSTT------SSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTT-TEEECCCTTSSH
T ss_pred             cCceEEecCCCCCHHHHHHHHHHhCCCC------cceEEeCCCcCCCCCChHHHHHHHHHhhhhcCC-ceEEecCCchHh
Confidence            4689999999999999999999987643      478999999999999999999999999877775 899999999999


Q ss_pred             hhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290           84 FAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG  163 (255)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~  163 (255)
                      +++....         |                                                      ..++..+|+
T Consensus       129 ~l~~~~g---------f------------------------------------------------------~~e~~~~y~  145 (330)
T 1fjm_A          129 SINRIYG---------F------------------------------------------------------YDECKRRYN  145 (330)
T ss_dssp             HHHHHHS---------H------------------------------------------------------HHHHHHHSC
T ss_pred             hhhhhhh---------h------------------------------------------------------hhhhhhhcc
Confidence            8864321         0                                                      022223333


Q ss_pred             CCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccC
Q 025290          164 VAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSG  243 (255)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~  243 (255)
                               ..+.+++.+||+.||++..++.            ++++||||+.|..+.-+|...+ .|....|...  .-
T Consensus       146 ---------~~l~~~~~~~f~~LPl~~~i~~------------~i~~vHgGl~p~~~~l~qi~~i-~r~~e~~~~g--~~  201 (330)
T 1fjm_A          146 ---------IKLWKTFTDCFNCLPIAAIVDE------------KIFCCHGGLSPDLQSMEQIRRI-MRPTDVPDQG--LL  201 (330)
T ss_dssp             ---------HHHHHHHHHHHTTCCCEEEETT------------TEEEESSCCCTTCSCHHHHHHC-CSSCCCCSSS--HH
T ss_pred             ---------HHHHHHHHHHHHhCCceEEEcC------------cEEEEccCCCcccCCHHHHhhh-hcCccCcccc--hH
Confidence                     1234578999999999755541            8999999999998766665533 2222222211  11


Q ss_pred             CccccCCCcc
Q 025290          244 RKNVWDIPEV  253 (255)
Q Consensus       244 ~~~~w~~~~~  253 (255)
                      .+.+|++|+.
T Consensus       202 ~dlLWsdp~~  211 (330)
T 1fjm_A          202 CDLLWSDPDK  211 (330)
T ss_dssp             HHHHHCEECT
T ss_pred             HHHHhcCCcc
Confidence            2568888864

>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*

Probab=99.92  E-value=6.1e-26  Score=204.27  Aligned_cols=156  Identities=25%  Similarity=0.352  Sum_probs=115.6

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .+|++|||||||++.+|.++|+.++...      .+.+||+||+||||+.|.+++.++..++..+|+ ++++||||||.+
T Consensus        55 ~~~i~viGDIHG~~~~L~~ll~~~g~~~------~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~-~v~~lrGNHE~~  127 (299)
T 3e7a_A           55 EAPLKICGDIHGQYYDLLRLFEYGGFPP------ESNYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECA  127 (299)
T ss_dssp             CSSEEEECBCTTCHHHHHHHHHHHCSTT------SSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTT-TEEECCCTTSSH
T ss_pred             CCCEEEEecCCCCHHHHHHHHHHhCCCC------CccEEeCCcccCCCCCcHHHHHHHHHHHhhCCC-cEEEEecCchhh
Confidence            4689999999999999999999987653      478999999999999999999999999888885 799999999998


Q ss_pred             hhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290           84 FAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG  163 (255)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~  163 (255)
                      .++....         |                                                      ..+....|+
T Consensus       128 ~i~~~yg---------F------------------------------------------------------~~e~~~ky~  144 (299)
T 3e7a_A          128 SINRIYG---------F------------------------------------------------------YDECKRRYN  144 (299)
T ss_dssp             HHHHHHS---------H------------------------------------------------------HHHHHHHSC
T ss_pred             hhccccc---------c------------------------------------------------------hHHHHHHhh
Confidence            7764221         0                                                      012222232


Q ss_pred             CCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccC
Q 025290          164 VAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSG  243 (255)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~  243 (255)
                               ..+.+...++|+.||++..++.            ++++||||+.|....-+|...+ .|....|...  .-
T Consensus       145 ---------~~l~~~~~~~f~~LPlaaii~~------------~il~vHGGlsp~~~~l~~i~~i-~R~~~~p~~~--~~  200 (299)
T 3e7a_A          145 ---------IKLWKTFTDCFNCLPIAAIVDE------------KIFCCHGGLSPDLQSMEQIRRI-MRPTDVPDQG--LL  200 (299)
T ss_dssp             ---------HHHHHHHHHHHTTCCCEEEETT------------TEEEESSCCCTTCCCTHHHHTC-CSSCCCCSSS--HH
T ss_pred             ---------HHHHHHHHHHHhhCCceEEECC------------eEEEEcCccCcccCCHHHHHhc-cCCCcCCcch--hh
Confidence                     1233578899999999977662            8999999999987655555432 2222222222  23


Q ss_pred             CccccCCCcc
Q 025290          244 RKNVWDIPEV  253 (255)
Q Consensus       244 ~~~~w~~~~~  253 (255)
                      .+.+||||+.
T Consensus       201 ~dllWsDP~~  210 (299)
T 3e7a_A          201 CDLLWSDPDK  210 (299)
T ss_dssp             HHHHHCEECT
T ss_pred             hhhhcCCccc
Confidence            4679999974

>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A

Probab=99.92  E-value=1.4e-25  Score=203.23  Aligned_cols=79  Identities=29%  Similarity=0.445  Sum_probs=70.4

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      ..+|++|||||||++.+|.++|+..+....     .+++||+||+||||+.|.+|+.++..++..+|+ ++++||||||.
T Consensus        58 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~-----~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~-~v~~lrGNHE~  131 (315)
T 3h63_A           58 ETEKITVCGDTHGQFYDLLNIFELNGLPSE-----TNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPD-HFHLLRGNHET  131 (315)
T ss_dssp             TTCEEEEECCCTTCHHHHHHHHHHHCCCBT-----TBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTT-TEEEECCTTSS
T ss_pred             CCceEEEEecCCCCHHHHHHHHHHhCCCCC-----CCEEEEeCCccCCCcChHHHHHHHHHhhhhcCC-cEEEEecCccc
Confidence            358999999999999999999999876543     356999999999999999999999999888885 89999999999


Q ss_pred             chhhh
Q 025290           83 GFAAF   87 (255)
Q Consensus        83 ~~~~~   87 (255)
                      ++++.
T Consensus       132 ~~l~~  136 (315)
T 3h63_A          132 DNMNQ  136 (315)
T ss_dssp             HHHHH
T ss_pred             ccccc
Confidence            88864

>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*

Probab=99.92  E-value=9.5e-26  Score=204.21  Aligned_cols=157  Identities=24%  Similarity=0.372  Sum_probs=116.6

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .++++|||||||++.+|.++|+.++...      .+.+||+||+||||+.|.+|++++.+++.++|+ ++++||||||.+
T Consensus        49 ~~~i~viGDIHG~~~~L~~ll~~~~~~~------~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~-~v~~lrGNHE~~  121 (309)
T 2ie4_C           49 RCPVTVCGDVHGQFHDLMELFRIGGKSP------DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRE-RITILRGNHESR  121 (309)
T ss_dssp             CSSEEEECCCTTCHHHHHHHHHHHCCTT------TSCEEECSCCSSSSTTHHHHHHHHHHHHHHCTT-TEEECCCTTSST
T ss_pred             cCCEEEEecCCCCHHHHHHHHHHcCCCC------CCEEEEeCCccCCCCChHHHHHHHHHHHhhCCC-cEEEEeCCCCHH
Confidence            4789999999999999999999887643      377999999999999999999999999888885 799999999998


Q ss_pred             hhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290           84 FAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG  163 (255)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~  163 (255)
                      ++.....         |                                                      ..+++.+|+
T Consensus       122 ~l~~~~g---------f------------------------------------------------------~~e~~~~yg  138 (309)
T 2ie4_C          122 QITQVYG---------F------------------------------------------------------YDECLRKYG  138 (309)
T ss_dssp             TGGGTSS---------H------------------------------------------------------HHHHHHHSS
T ss_pred             HHhhhhh---------h------------------------------------------------------hHHHHhhcc
Confidence            7753211         0                                                      034445555


Q ss_pred             CCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccC
Q 025290          164 VAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSG  243 (255)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~  243 (255)
                      ..        .+.+...++++.||+....+.            ++++||||+.|..+..+|...+ .|-...|.  ....
T Consensus       139 ~~--------~l~~~~~~~~~~LPl~~~i~~------------~il~vHgGl~p~~~~~~~i~~i-~r~~~~~~--~~~~  195 (309)
T 2ie4_C          139 NA--------NVWKYFTDLFDYLPLTALVDG------------QIFCLHGGLSPSIDTLDHIRAL-DRLQEVPH--EGPM  195 (309)
T ss_dssp             ST--------HHHHHHHHHTTSSCSCEEETT------------TEEECSSCCCTTCCSHHHHHTS-CCSSCCCS--SSHH
T ss_pred             cH--------HHHHHHHHHHHhCCceEEEcC------------cEEEECCCCCCcccCHHHHHhh-cccccCCh--hHHH
Confidence            32        123467899999999875542            8999999999999877776643 12112222  1122


Q ss_pred             CccccCCCcc
Q 025290          244 RKNVWDIPEV  253 (255)
Q Consensus       244 ~~~~w~~~~~  253 (255)
                      .+.+|++|+.
T Consensus       196 ~dllWsdp~~  205 (309)
T 2ie4_C          196 CDLLWSDPDD  205 (309)
T ss_dssp             HHHHHCEECS
T ss_pred             HHHhhCCCcc
Confidence            3678988863

>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A

Probab=99.92  E-value=1.2e-25  Score=206.33  Aligned_cols=156  Identities=23%  Similarity=0.321  Sum_probs=116.0

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .++++|||||||++.+|.++|+..+...      .+.+||+||+||||+.|.+|+.++..++..+|+ ++++||||||.+
T Consensus        69 ~~pi~ViGDIHG~~~dL~~ll~~~g~~~------~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~-~v~llrGNHE~~  141 (357)
T 3ll8_A           69 DAPVTVCGDIHGQFFDLMKLFEVGGSPA------NTRYLFLGDYVDRGYFSIECVLYLWALKILYPK-TLFLLRGNHECR  141 (357)
T ss_dssp             CSSEEEECCCTTCHHHHHHHHHHHCCTT------TCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTT-TEEECCCTTSSH
T ss_pred             cccceeeccCCCCHHHHHHHHHhcCCCC------CcEEEECCCccCCCcChHHHHHHHHHhhhhcCC-cEEEEeCchhhh
Confidence            4689999999999999999999876532      478999999999999999999999999988885 799999999998


Q ss_pred             hhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290           84 FAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG  163 (255)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~  163 (255)
                      .+.....         |                                                      ..++...|+
T Consensus       142 ~i~~~yg---------F------------------------------------------------------~~E~~~ky~  158 (357)
T 3ll8_A          142 HLTEYFT---------F------------------------------------------------------KQECKIKYS  158 (357)
T ss_dssp             HHHHHSS---------H------------------------------------------------------HHHHHHHSC
T ss_pred             hhhcccC---------c------------------------------------------------------hhhhhhccc
Confidence            8764321         0                                                      023333332


Q ss_pred             CCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccC
Q 025290          164 VAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSG  243 (255)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~  243 (255)
                               ..+.++..+||+.||+...++.            ++++||||+.|...--+|...+ .|-...|....  .
T Consensus       159 ---------~~l~~~~~~~f~~LPlaaii~~------------~il~vHGGlsp~l~~ld~I~~i-~R~~e~p~~g~--~  214 (357)
T 3ll8_A          159 ---------ERVYDACMDAFDCLPLAALMNQ------------QFLCVHGGLSPEINTLDDIRKL-DRFKEPPAYGP--M  214 (357)
T ss_dssp             ---------HHHHHHHHHHHHTSCSEEEETT------------TEEECSSCCCTTCCSHHHHHTC-CCSSCCCSSSH--H
T ss_pred             ---------hhHHHHHHHHHHhCCcceEEcc------------cEEEEecCcCcccCCHHHHhhc-cccccCCccCc--h
Confidence                     2334678999999999977652            8999999999987654454432 12222222222  2


Q ss_pred             CccccCCCcc
Q 025290          244 RKNVWDIPEV  253 (255)
Q Consensus       244 ~~~~w~~~~~  253 (255)
                      -+.+||||+.
T Consensus       215 ~DlLWSDP~~  224 (357)
T 3ll8_A          215 CDILWSDPLE  224 (357)
T ss_dssp             HHHHHCEECT
T ss_pred             hHhhccCccc
Confidence            3679999975

>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}

Probab=99.92  E-value=1.2e-25  Score=205.11  Aligned_cols=158  Identities=18%  Similarity=0.271  Sum_probs=115.0

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      ..+|++|||||||++.+|.++|+.+++...     .+++||+||+||||+.|.+|+.++..++..+|+ ++++||||||.
T Consensus        62 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~-----~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~-~v~llrGNHE~  135 (335)
T 3icf_A           62 PDVKISVCGDTHGQFYDVLNLFRKFGKVGP-----KHTYLFNGDFVDRGSWSCEVALLFYCLKILHPN-NFFLNRGNHES  135 (335)
T ss_dssp             TTCEEEEECCCTTCHHHHHHHHHHHCCCBT-----TEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTT-TEEECCCTTSS
T ss_pred             cCceEEEEecCCCCHHHHHHHHHHcCCCCC-----CcEEEEeCCccCCCcChHHHHHHHHHHhhhCCC-cEEEecCchhh
Confidence            357899999999999999999999876532     367999999999999999999999999888885 79999999999


Q ss_pred             chhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhc
Q 025290           83 GFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESY  162 (255)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy  162 (255)
                      +.++....         |                                                      ..++...|
T Consensus       136 ~~i~~~yg---------f------------------------------------------------------~~e~~~k~  152 (335)
T 3icf_A          136 DNMNKIYG---------F------------------------------------------------------EDECKYKY  152 (335)
T ss_dssp             HHHHHHHS---------H------------------------------------------------------HHHHHHHS
T ss_pred             hhhhhccc---------c------------------------------------------------------chHhHhhc
Confidence            88764221         0                                                      02222223


Q ss_pred             CCCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeec-cCCCChHHHHHHhhhccCCCCchhhc
Q 025290          163 GVAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGL-ERGKKVGEQLELLKAKDTRVPKVEAL  241 (255)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi-~p~~~l~~q~~~~~~r~~~~~~~~~~  241 (255)
                      +         ..+.+.+.+||+.||++..++.            ++++||||+ .|....-++...+ .|-...|.  ..
T Consensus       153 ~---------~~l~~~~~~~f~~LPlaaii~~------------~il~vHGGl~sp~~~~ld~i~~i-~R~~~~p~--~g  208 (335)
T 3icf_A          153 S---------QRIFNMFAQSFESLPLATLINN------------DYLVMHGGLPSDPSATLSDFKNI-DRFAQPPR--DG  208 (335)
T ss_dssp             C---------HHHHHHHHHHHTTSCSEEEETT------------TEEECSSCCCSCTTCCHHHHHTC-CCSSCCCS--SS
T ss_pred             c---------HHHHHHHHHHHhhcceeEEEcC------------cEEEecCCcCCCccCCHHHHHhC-cccccccc--cc
Confidence            2         2334678999999999987762            899999999 6775433443322 12112222  22


Q ss_pred             cCCccccCCCcc
Q 025290          242 SGRKNVWDIPEV  253 (255)
Q Consensus       242 ~~~~~~w~~~~~  253 (255)
                      ...+.+||||+.
T Consensus       209 ~~~dlLWSDP~~  220 (335)
T 3icf_A          209 AFMELLWADPQE  220 (335)
T ss_dssp             HHHHHHHCEECS
T ss_pred             chhhhhccCCCC
Confidence            233679999974

>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3

Probab=99.92  E-value=3e-25  Score=211.33  Aligned_cols=156  Identities=23%  Similarity=0.313  Sum_probs=114.8

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .++++|||||||++.+|.++|+..+..      +.+.+||+||+||||+.|.+|+.+|..++..+|+ ++++||||||.+
T Consensus        82 ~~pI~VIGDIHGq~~dL~~LL~~~g~p------~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~-~v~lLRGNHE~~  154 (521)
T 1aui_A           82 DAPVTVCGDIHGQFFDLMKLFEVGGSP------ANTRYLFLGDYVDRGYFSIECVLYLWALKILYPK-TLFLLRGNHECR  154 (521)
T ss_dssp             CSSEEEECCCTTCHHHHHHHHHHHCCT------TTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTT-TEEECCCTTSSH
T ss_pred             ccceeeccCCCCCHHHHHHHHHhcCCC------CcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCC-eEEEecCCccHH
Confidence            478999999999999999999965432      3589999999999999999999999999888885 899999999999


Q ss_pred             hhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290           84 FAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG  163 (255)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~  163 (255)
                      .+.....         |                                                      ..+++.+|+
T Consensus       155 ~l~~~yg---------F------------------------------------------------------~~E~~~ky~  171 (521)
T 1aui_A          155 HLTEYFT---------F------------------------------------------------------KQECKIKYS  171 (521)
T ss_dssp             HHHHHSS---------H------------------------------------------------------HHHHHHHSC
T ss_pred             HHHHHhC---------c------------------------------------------------------cHHHHHhhh
Confidence            8864321         0                                                      023344443


Q ss_pred             CCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccC
Q 025290          164 VAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSG  243 (255)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~  243 (255)
                               ..+.+.+.+||+.||++...+.            +++|||||+.|...--+|...+ .|....|.  ....
T Consensus       172 ---------~~l~~~~~~~f~~LPlaaii~~------------~il~VHGGlsP~~~sld~I~~I-~R~~e~p~--~g~~  227 (521)
T 1aui_A          172 ---------ERVYDACMDAFDCLPLAALMNQ------------QFLCVHGGLSPEINTLDDIRKL-DRFKEPPA--YGPM  227 (521)
T ss_dssp             ---------HHHHHHHHHHHTTSCCEEEETT------------TEEEESSCCCTTCCSHHHHHHS-CCSSSCCS--SSHH
T ss_pred             ---------hHHHHHHHHHHHhCCceEEecC------------CceEECCCcCcccCCHHHhhhc-cCCcCCCc--cchh
Confidence                     1334678999999999965542            8999999999997655555433 12111222  1112


Q ss_pred             CccccCCCcc
Q 025290          244 RKNVWDIPEV  253 (255)
Q Consensus       244 ~~~~w~~~~~  253 (255)
                      .+.+|+||..
T Consensus       228 ~DLLWSDP~~  237 (521)
T 1aui_A          228 CDILWSDPLE  237 (521)
T ss_dssp             HHHHHCEECT
T ss_pred             hhheecCccc
Confidence            3678999975

>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}

Probab=99.90  E-value=3.3e-24  Score=191.56  Aligned_cols=133  Identities=24%  Similarity=0.351  Sum_probs=100.8

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      ||++|||||||++..|.++|+.+++..     ..+.+||+||+|||||.+.+++++++++..     ++++|+||||.++
T Consensus         1 M~i~vigDiHG~~~~l~~ll~~~~~~~-----~~d~~v~lGD~vdrG~~s~~~l~~l~~l~~-----~~~~v~GNHe~~~   70 (280)
T 2dfj_A            1 MATYLIGDVHGCYDELIALLHKVEFTP-----GKDTLWLTGDLVARGPGSLDVLRYVKSLGD-----SVRLVLGNHDLHL   70 (280)
T ss_dssp             -CEEEECCCCSCHHHHHHHHHHTTCCT-----TTCEEEECSCCSSSSSCHHHHHHHHHHTGG-----GEEECCCHHHHHH
T ss_pred             CeEEEEecCCCCHHHHHHHHHHhCCCC-----CCCEEEEeCCcCCCCCccHHHHHHHHhCCC-----ceEEEECCCcHHH
Confidence            689999999999999999999987632     248999999999999999999999999843     6999999999998


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      +.........                                      +                     ...++.++  
T Consensus        71 l~~~~g~~~~--------------------------------------~---------------------~~~~~~~~--   89 (280)
T 2dfj_A           71 LAVFAGISRN--------------------------------------K---------------------PKDRLTPL--   89 (280)
T ss_dssp             HHHHTTSSCC--------------------------------------C---------------------GGGCCHHH--
T ss_pred             HhHhcCCccc--------------------------------------c---------------------hhhhHHHH--
Confidence            8765421000                                      0                     01111111  


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHH
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQL  225 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~  225 (255)
                            +......++.+||++||+++.++.           .+++|||||+.|..++++..
T Consensus        90 ------~~~~~~~~~~~~l~~lP~~~~~~~-----------~~~~~vHaGi~p~~~l~~~~  133 (280)
T 2dfj_A           90 ------LEAPDADELLNWLRRQPLLQIDEE-----------KKLVMAHAGITPQWDLQTAK  133 (280)
T ss_dssp             ------HTSTTHHHHHHHHHTSCSEEEETT-----------TTEEEESSCCCTTCCHHHHH
T ss_pred             ------hhhhHHHHHHHHHHhCCcEEEECC-----------CeEEEEeCCCCcCcCHHHHH
Confidence                  112345678999999999987661           16999999999999876543

>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3

Probab=99.89  E-value=1.6e-23  Score=198.67  Aligned_cols=79  Identities=29%  Similarity=0.445  Sum_probs=70.0

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      ..+|++|||||||++.+|.++|+.++....     .+.+||+||+||||+.|.+|+.+++.++..+|+ ++++||||||.
T Consensus       211 ~~~~~~vigDiHG~~~~l~~~l~~~~~~~~-----~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~-~~~~lrGNHE~  284 (477)
T 1wao_1          211 ETEKITVCGDTHGQFYDLLNIFELNGLPSE-----TNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPD-HFHLLRGNHET  284 (477)
T ss_dssp             SSCEEEEECBCTTCHHHHHHHHHHHCCCBT-----TBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTT-TEEEECCTTSS
T ss_pred             CCcceEEEeCCCCCHHHHHHHHHHcCCCCC-----cCeEEEeccccCCCcchHHHHHHHHHHHhhCCC-ceEeecCCccH
Confidence            358999999999999999999999876432     467999999999999999999999999877775 89999999999


Q ss_pred             chhhh
Q 025290           83 GFAAF   87 (255)
Q Consensus        83 ~~~~~   87 (255)
                      +.++.
T Consensus       285 ~~~~~  289 (477)
T 1wao_1          285 DNMNQ  289 (477)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            88764

>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}

Probab=99.88  E-value=9.9e-23  Score=180.04  Aligned_cols=163  Identities=25%  Similarity=0.395  Sum_probs=111.5

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .+|+++||||||++..|.++|+.++....     .|.+|++||++|||+.+.++++++.++       ++++|+||||.+
T Consensus        18 ~~~i~visDiHg~~~~l~~~l~~~~~~~~-----~d~ii~~GD~vd~g~~~~~~l~~l~~~-------~~~~v~GNHd~~   85 (262)
T 2qjc_A           18 TGRVIIVGDIHGCRAQLEDLLRAVSFKQG-----SDTLVAVGDLVNKGPDSFGVVRLLKRL-------GAYSVLGNHDAK   85 (262)
T ss_dssp             CSCEEEECCCTTCHHHHHHHHHHHTCCTT-----TSEEEECSCCSSSSSCHHHHHHHHHHH-------TCEECCCHHHHH
T ss_pred             CCeEEEEeCCCCCHHHHHHHHHHHhccCC-----CCEEEEecCCCCCCCCHHHHHHHHHHC-------CCEEEeCcChHH
Confidence            45999999999999999999999876431     389999999999999999999999874       378999999998


Q ss_pred             hhhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcC
Q 025290           84 FAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYG  163 (255)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~  163 (255)
                      .+..+....                    ...|+..            .+                      ..++    
T Consensus        86 ~~~~~~~~~--------------------~~~~~~~------------~~----------------------~~~~----  107 (262)
T 2qjc_A           86 LLKLVKKLG--------------------KKECLKG------------RD----------------------AKSS----  107 (262)
T ss_dssp             HHHHHHCC-------------------------------------------------------------------C----
T ss_pred             HHhhhcCCC--------------------ccccccc------------cc----------------------hHHH----
Confidence            887543210                    0112210            00                      1110    


Q ss_pred             CCcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHH--HhhhccCCCCchhhc
Q 025290          164 VAHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLE--LLKAKDTRVPKVEAL  241 (255)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~--~~~~r~~~~~~~~~~  241 (255)
                          .......+.+++.+||++||.+++++.           .+++|||||+.|..++++|..  +.|+|....+.....
T Consensus       108 ----~~~~~~~l~~~~~~~l~~lP~~~~i~~-----------~~i~~vHgg~~p~~~~~~~~~~~l~~ir~~~~~~~~~~  172 (262)
T 2qjc_A          108 ----LAPLAQSIPTDVETYLSQLPHIIRIPA-----------HNVMVAHAGLHPQRPVDRQYEDEVTTMRNLIEKEQEAT  172 (262)
T ss_dssp             ----HHHHHHHCCHHHHHHHHTCCSEEEEGG-----------GTEEEESSCCCTTSCGGGCCHHHHHHCCEEEEC-----
T ss_pred             ----HHHHHhhhhHHHHHHHHcCCcEEEECC-----------CcEEEEECCCCCCCCcccCCHHHHhhhhhcccccccCC
Confidence                012345677889999999999988641           189999999999999988753  567776544222222


Q ss_pred             cCCccccCCC
Q 025290          242 SGRKNVWDIP  251 (255)
Q Consensus       242 ~~~~~~w~~~  251 (255)
                      .+....|++|
T Consensus       173 ~G~~~~~~d~  182 (262)
T 2qjc_A          173 GGVTLTATEE  182 (262)
T ss_dssp             --CCEEEESC
T ss_pred             CCccccccCC
Confidence            2333445544

>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A

Probab=99.85  E-value=1.1e-21  Score=179.57  Aligned_cols=84  Identities=25%  Similarity=0.348  Sum_probs=69.7

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCC--CCcEEEEeCCcCCCCCChHHHHHHHHhCCC---CCCCCcEEEEC
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDF--NSAIIIFLGDYCDRGPNTREVIDFLISLPT---KYPNQKHVFLS   77 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~--~~d~li~lGDlvDrG~~s~~vl~~l~~l~~---~~p~~~v~~i~   77 (255)
                      ..+|++|||||||++.+|.++|+.+++......+  ..+.+||+||+||||+.|.++++++.+++.   .+|+ ++++|+
T Consensus        69 ~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~-~v~~v~  147 (342)
T 2z72_A           69 GIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGG-MVHLLM  147 (342)
T ss_dssp             CCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTC-EEEECC
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCC-eEEEEe
Confidence            4689999999999999999999988764321111  358999999999999999999999999864   4554 799999


Q ss_pred             CCcccchhhh
Q 025290           78 GNHDLGFAAF   87 (255)
Q Consensus        78 GNHE~~~~~~   87 (255)
                      ||||.+++..
T Consensus       148 GNHE~~~l~~  157 (342)
T 2z72_A          148 GNHEQMVLGG  157 (342)
T ss_dssp             CHHHHHHHHT
T ss_pred             cCCcHHHhhC
Confidence            9999998863

>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3

Probab=99.79  E-value=1.5e-19  Score=154.83  Aligned_cols=74  Identities=23%  Similarity=0.398  Sum_probs=63.7

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      ..||+++||||||++.+|.++++.++...     ..|.+|++||++|+|+.+.++++++.+.       ++++|+||||.
T Consensus        11 ~~~~i~visDiHg~~~~l~~~l~~~~~~~-----~~d~~i~~GD~~~~g~~~~~~~~~l~~~-------~~~~v~GNhd~   78 (221)
T 1g5b_A           11 KYRNIWVVGDLHGCYTNLMNKLDTIGFDN-----KKDLLISVGDLVDRGAENVECLELITFP-------WFRAVRGNHEQ   78 (221)
T ss_dssp             GCSCEEEECCCTTCHHHHHHHHHHHTCCT-----TTCEEEECSCCSSSSSCHHHHHGGGGST-------TEEECCCHHHH
T ss_pred             CCceEEEEEcCCCCHHHHHHHHHHccCCC-----CCCEEEEeCCccCCCCChHHHHHHHhcC-------CEEEEccCcHH
Confidence            46899999999999999999999986532     2489999999999999999999887642       48999999999


Q ss_pred             chhhhh
Q 025290           83 GFAAFV   88 (255)
Q Consensus        83 ~~~~~~   88 (255)
                      +.+...
T Consensus        79 ~~~~~~   84 (221)
T 1g5b_A           79 MMIDGL   84 (221)
T ss_dssp             HHHHHH
T ss_pred             HHHhhh
Confidence            887765

>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0

Probab=99.69  E-value=5.7e-17  Score=140.98  Aligned_cols=72  Identities=28%  Similarity=0.411  Sum_probs=63.0

Q ss_pred             CCCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290            2 SRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         2 ~~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      +.+||+++||||||++.+|+++++.+.  .      .|.+|++||++++|+.+.++++++.++..      +++|+||||
T Consensus         1 ~~~mri~~isDiHg~~~~l~~~l~~~~--~------~d~ii~~GDl~~~g~~~~~~~~~l~~~~~------~~~v~GNhD   66 (246)
T 3rqz_A            1 SNAMRILIISDVHANLVALEAVLSDAG--R------VDDIWSLGDIVGYGPRPRECVELVRVLAP------NISVIGNHD   66 (246)
T ss_dssp             -CCCCEEEECCCTTCHHHHHHHHHHHC--S------CSEEEECSCCSSSSSCHHHHHHHHHHHCS------SEECCCHHH
T ss_pred             CCCcEEEEEeecCCCHHHHHHHHHhcc--C------CCEEEECCCcCCCCCCHHHHHHHHHhcCC------CEEEeCchH
Confidence            357899999999999999999999886  2      38999999999999999999999999862      689999999


Q ss_pred             cchhhh
Q 025290           82 LGFAAF   87 (255)
Q Consensus        82 ~~~~~~   87 (255)
                      ..+...
T Consensus        67 ~~~~~~   72 (246)
T 3rqz_A           67 WACIGR   72 (246)
T ss_dssp             HHHTCC
T ss_pred             HHHhcc
Confidence            887643

>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*

Probab=99.68  E-value=1.4e-16  Score=141.09  Aligned_cols=75  Identities=21%  Similarity=0.289  Sum_probs=65.9

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      .+.||++||||||++.+|+++|+.+....      .|.+|++||++++|+.+.++++++.++.      .+++|+||||.
T Consensus        10 ~~~~i~~iSDiHg~~~~l~~vl~~~~~~~------~D~ii~~GDlv~~g~~~~~~~~~l~~~~------~~~~v~GNhD~   77 (270)
T 3qfm_A           10 DMTKIALLSDIHGNTTALEAVLADARQLG------VDEYWLLGDILMPGTGRRRILDLLDQLP------ITARVLGNWED   77 (270)
T ss_dssp             -CEEEEEECCCTTCHHHHHHHHHHHHHTT------CCEEEECSCCSSSSSCSHHHHHHHHTSC------EEEECCCHHHH
T ss_pred             cccEEEEEecCCCCHHHHHHHHHHHHhcC------CCEEEEcCCCCCCCCCHHHHHHHHHccC------CEEEEcCChHH
Confidence            45699999999999999999999987653      3899999999999999999999999874      48899999999


Q ss_pred             chhhhhc
Q 025290           83 GFAAFVG   89 (255)
Q Consensus        83 ~~~~~~~   89 (255)
                      .++....
T Consensus        78 ~~~~~~~   84 (270)
T 3qfm_A           78 SLWHGVR   84 (270)
T ss_dssp             HHHHHHT
T ss_pred             HHHHhhc
Confidence            8887654

>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A

Probab=99.63  E-value=3.9e-16  Score=135.16  Aligned_cols=77  Identities=19%  Similarity=0.211  Sum_probs=63.7

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhh---hccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLE---THIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNH   80 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~---~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNH   80 (255)
                      +||+++||||||++.+|.++++.+.   ....    ..|.+|++||++|+|+.+.++++++.++....   ++++|+|||
T Consensus         1 mm~i~~isD~H~~~~~l~~~l~~~~~~~~~~~----~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~---~~~~v~GNh   73 (252)
T 1nnw_A            1 MVYVAVLANIAGNLPALTAALSRIEEMREEGY----EIEKYYILGNIVGLFPYPKEVIEVIKDLTKKE---NVKIIRGKY   73 (252)
T ss_dssp             -CEEEEEECCTTCHHHHHHHHHHHHHHHHTTC----CEEEEEEESCSSSSSSCHHHHHHHHHHHHHHS---CEEEECCHH
T ss_pred             CcEEEEEeecCCCHHHHHHHHHHHHhhhhccC----CCCEEEEeCccCCCCCCHHHHHHHHHhhHhhc---CeeEEecch
Confidence            4799999999999999999999886   4310    13899999999999999999999999875322   489999999


Q ss_pred             ccchhhh
Q 025290           81 DLGFAAF   87 (255)
Q Consensus        81 E~~~~~~   87 (255)
                      |......
T Consensus        74 D~~~~~~   80 (252)
T 1nnw_A           74 DQIIAMS   80 (252)
T ss_dssp             HHHHHHS
T ss_pred             HHHhhcc
Confidence            9877653

>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7

Probab=99.31  E-value=4.2e-12  Score=107.95  Aligned_cols=74  Identities=19%  Similarity=0.360  Sum_probs=62.5

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCC--------ChHHHHHHHHhCCCCCCCCcEEE
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGP--------NTREVIDFLISLPTKYPNQKHVF   75 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~--------~s~~vl~~l~~l~~~~p~~~v~~   75 (255)
                      +||+++|||+||+...++++++.+....      .|.+|++||++|+|+        .+.++++++.++..     ++++
T Consensus        25 mmki~~iSD~H~~~~~l~~~l~~~~~~~------~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~~-----~v~~   93 (208)
T 1su1_A           25 MMKLMFASDIHGSLPATERVLELFAQSG------AQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAH-----KVIA   93 (208)
T ss_dssp             CCEEEEECCCTTBHHHHHHHHHHHHHHT------CSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGG-----GEEE
T ss_pred             cEEEEEEEcCCCCHHHHHHHHHHHHhcC------CCEEEECCCccccCcccccccccCHHHHHHHHHhcCC-----ceEE
Confidence            5799999999999999999999886543      389999999999998        36889999988753     5899


Q ss_pred             ECCCcccchhhhh
Q 025290           76 LSGNHDLGFAAFV   88 (255)
Q Consensus        76 i~GNHE~~~~~~~   88 (255)
                      |+||||..+....
T Consensus        94 V~GNHD~~~~~~~  106 (208)
T 1su1_A           94 VRGNCDSEVDQML  106 (208)
T ss_dssp             CCCTTCCHHHHHH
T ss_pred             EECCCchHHHHhh
Confidence            9999998765543

>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6

Probab=99.23  E-value=2.4e-11  Score=102.15  Aligned_cols=74  Identities=15%  Similarity=0.235  Sum_probs=56.0

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      +|||++|||+|++...++++++.+....      .|.+|++||++++++.+.++.+++..+....  ..+++|+||||..
T Consensus         5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~------~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~~--~pv~~v~GNHD~~   76 (228)
T 1uf3_A            5 VRYILATSNPMGDLEALEKFVKLAPDTG------ADAIALIGNLMPKAAKSRDYAAFFRILSEAH--LPTAYVPGPQDAP   76 (228)
T ss_dssp             CCEEEEEECCTTCHHHHHHHHTHHHHHT------CSEEEEESCSSCTTCCHHHHHHHHHHHGGGC--SCEEEECCTTSCS
T ss_pred             eEEEEEEeeccCCHHHHHHHHHHHhhcC------CCEEEECCCCCCCCCCHHHHHHHHHHHHhcC--CcEEEECCCCCch
Confidence            5899999999999999999988876543      3899999999999966654444444443221  1499999999976


Q ss_pred             hh
Q 025290           84 FA   85 (255)
Q Consensus        84 ~~   85 (255)
                      ..
T Consensus        77 ~~   78 (228)
T 1uf3_A           77 IW   78 (228)
T ss_dssp             HH
T ss_pred             hH
Confidence            54

>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6

Probab=99.14  E-value=5.5e-11  Score=102.53  Aligned_cols=76  Identities=16%  Similarity=0.234  Sum_probs=56.0

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--------------------------HH
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--------------------------RE   56 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--------------------------~~   56 (255)
                      ++|||++|||+|++...+.++++.+....      .|.+|++||++|+++.+                          ..
T Consensus         4 ~~mri~~iSDlH~~~~~~~~~l~~~~~~~------~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~   77 (260)
T 2yvt_A            4 MPRKVLAIKNFKERFDLLPKLKGVIAEKQ------PDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIET   77 (260)
T ss_dssp             CCCEEEEEECCTTCGGGHHHHHHHHHHHC------CSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             ceEEEEEEeecCCChHHHHHHHHHHHhcC------CCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHH
Confidence            46899999999999999999998876543      38999999999998642                          22


Q ss_pred             HHHHHHhCCCCCCCCcEEEECCCcccchhh
Q 025290           57 VIDFLISLPTKYPNQKHVFLSGNHDLGFAA   86 (255)
Q Consensus        57 vl~~l~~l~~~~p~~~v~~i~GNHE~~~~~   86 (255)
                      ..+++..+....  ..+++|+||||.....
T Consensus        78 ~~~~l~~l~~~~--~pv~~v~GNHD~~~~~  105 (260)
T 2yvt_A           78 LDKFFREIGELG--VKTFVVPGKNDAPLKI  105 (260)
T ss_dssp             HHHHHHHHHTTC--SEEEEECCTTSCCHHH
T ss_pred             HHHHHHHHHhcC--CcEEEEcCCCCchhhh
Confidence            333444443211  2599999999986543

>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A

Probab=99.12  E-value=1.4e-10  Score=97.19  Aligned_cols=66  Identities=17%  Similarity=0.222  Sum_probs=54.1

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      +||+++|||+||+..++.++++.+....      .|.+|++||++|.     ++++.+.++..     .+++|+||||..
T Consensus        25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~~------~D~ii~~GDl~~~-----~~~~~l~~l~~-----~~~~V~GNhD~~   88 (190)
T 1s3l_A           25 HMKIGIMSDTHDHLPNIRKAIEIFNDEN------VETVIHCGDFVSL-----FVIKEFENLNA-----NIIATYGNNDGE   88 (190)
T ss_dssp             -CEEEEECCCTTCHHHHHHHHHHHHHSC------CSEEEECSCCCST-----HHHHHGGGCSS-----EEEEECCTTCCC
T ss_pred             CeEEEEEeeCCCCHHHHHHHHHHHhhcC------CCEEEECCCCCCH-----HHHHHHHhcCC-----CEEEEeCCCcch
Confidence            3899999999999999999998886543      3899999999973     57777776532     599999999987


Q ss_pred             hh
Q 025290           84 FA   85 (255)
Q Consensus        84 ~~   85 (255)
                      ..
T Consensus        89 ~~   90 (190)
T 1s3l_A           89 RC   90 (190)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}

Probab=98.91  E-value=7.6e-10  Score=91.88  Aligned_cols=64  Identities=25%  Similarity=0.232  Sum_probs=51.3

Q ss_pred             CCeEEEEccCCC--CHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290            4 PRRVCCIGDVHG--YISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         4 ~~ri~vigDIHG--~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      +||+++|||+||  +..+|.++++.+. ..      .|.+|++||++|     .++++++.++..     ++++|+||||
T Consensus        22 mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~------~D~ii~~GD~~~-----~~~~~~l~~~~~-----~v~~V~GNhD   84 (178)
T 2kkn_A           22 VKRFLLISDSHVPVRMASLPDEILNSL-KE------YDGVIGLGDYVD-----LDTVILLEKFSK-----EFYGVHGNMD   84 (178)
T ss_dssp             CEEEEEECCCCBTTTTCCCCHHHHHGG-GG------CSEEEESSCBSC-----HHHHHHHHHHTS-----SEEECCCSSS
T ss_pred             ceEEEEEecccCCCCHHHHHHHHHHHh-cC------CCEEEECCCCCC-----HHHHHHHHhcCC-----CEEEEECCCC
Confidence            479999999997  7777888887754 22      489999999998     378888888742     4899999999


Q ss_pred             cch
Q 025290           82 LGF   84 (255)
Q Consensus        82 ~~~   84 (255)
                      ...
T Consensus        85 ~~~   87 (178)
T 2kkn_A           85 YPD   87 (178)
T ss_dssp             CGG
T ss_pred             cHH
Confidence            753

>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8

Probab=98.90  E-value=2.5e-09  Score=89.21  Aligned_cols=73  Identities=22%  Similarity=0.300  Sum_probs=53.9

Q ss_pred             CCeEEEEccCCCCHHH-------------HHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCC
Q 025290            4 PRRVCCIGDVHGYISK-------------LQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPN   70 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~-------------l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~   70 (255)
                      .||+++|||+|+....             +.++++.+.....    ..|.+|++||++++|+...++++++.++..    
T Consensus         1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~D~vi~~GDl~~~~~~~~~~~~~l~~l~~----   72 (195)
T 1xm7_A            1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLK----PEDTLYHLGDFTWHFNDKNEYLRIWKALPG----   72 (195)
T ss_dssp             CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCC----TTCEEEECSCCBSCSCCTTSHHHHHHHSSS----
T ss_pred             CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCC----CCCEEEECCCCCCCchhHHHHHHHHHHCCC----
Confidence            4789999999964332             2334455443211    248999999999998778889999988753    


Q ss_pred             CcEEEECCCcccchh
Q 025290           71 QKHVFLSGNHDLGFA   85 (255)
Q Consensus        71 ~~v~~i~GNHE~~~~   85 (255)
                       .+++|+||||....
T Consensus        73 -~~~~v~GNhD~~~~   86 (195)
T 1xm7_A           73 -RKILVMGNHDKDKE   86 (195)
T ss_dssp             -EEEEECCTTCCCHH
T ss_pred             -CEEEEeCCCCCchh
Confidence             58999999998653

>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A

Probab=98.83  E-value=7.6e-09  Score=89.26  Aligned_cols=70  Identities=20%  Similarity=0.198  Sum_probs=52.9

Q ss_pred             CeEEEEccCCCCH------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH--HHHHHHHhCCCCCCC
Q 025290            5 RRVCCIGDVHGYI------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR--EVIDFLISLPTKYPN   70 (255)
Q Consensus         5 ~ri~vigDIHG~~------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~--~vl~~l~~l~~~~p~   70 (255)
                      |||++|||+|+..            ..|+++++.+....+    ..|.+|++||+++.++.+.  .+.+.+.++..    
T Consensus         1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~----~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~----   72 (274)
T 3d03_A            1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRE----RPDAVVVSGDIVNCGRPEEYQVARQILGSLNY----   72 (274)
T ss_dssp             CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSS----CCSEEEEESCCBSSCCHHHHHHHHHHHTTCSS----
T ss_pred             CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCC----CCCEEEECCCCCCCCCHHHHHHHHHHHHhcCC----
Confidence            6899999999884            678888888865421    2489999999999886432  44555555532    


Q ss_pred             CcEEEECCCcccc
Q 025290           71 QKHVFLSGNHDLG   83 (255)
Q Consensus        71 ~~v~~i~GNHE~~   83 (255)
                       .+++|+||||..
T Consensus        73 -p~~~v~GNHD~~   84 (274)
T 3d03_A           73 -PLYLIPGNHDDK   84 (274)
T ss_dssp             -CEEEECCTTSCH
T ss_pred             -CEEEECCCCCCH
Confidence             499999999974

>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7

Probab=98.76  E-value=3.8e-09  Score=89.86  Aligned_cols=66  Identities=21%  Similarity=0.363  Sum_probs=47.7

Q ss_pred             CCeEEEEccCCCCHHH--HHHHHHH-hhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCc
Q 025290            4 PRRVCCIGDVHGYISK--LQNLWKN-LETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNH   80 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~--l~~lL~~-~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNH   80 (255)
                      .||+++|||+|++...  +.+.+.. +...      ..|.+|++||+++     .++++++.++..     .+++|+|||
T Consensus        25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~------~~D~vi~~GDl~~-----~~~l~~l~~~~~-----~v~~V~GNH   88 (215)
T 2a22_A           25 GDLVLLIGDLKIPYGAKELPSNFRELLATD------KINYVLCTGNVCS-----QEYVEMLKNITK-----NVYIVSGDL   88 (215)
T ss_dssp             CEEEEEECCCCTTTTCSSCCGGGHHHHHCT------TCCEEEECSCCCC-----HHHHHHHHHHCS-----CEEECCCTT
T ss_pred             CcEEEEEecCCCCCChHHHHHHHHHHHhcC------CCCEEEECCCCCC-----HHHHHHHHHcCC-----CEEEecCCC
Confidence            4799999999997532  3233322 2211      2489999999997     578888888753     489999999


Q ss_pred             ccchh
Q 025290           81 DLGFA   85 (255)
Q Consensus        81 E~~~~   85 (255)
                      |....
T Consensus        89 D~~~~   93 (215)
T 2a22_A           89 DSAIF   93 (215)
T ss_dssp             CCSCC
T ss_pred             cCccc
Confidence            97653

>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7

Probab=98.75  E-value=4.1e-09  Score=86.63  Aligned_cols=60  Identities=15%  Similarity=0.075  Sum_probs=45.5

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      +||+++|||+||+..+++++++.+.. .      .|.++++||+..      ++   +..+..     .+++|+||||..
T Consensus         6 ~m~i~~isD~H~~~~~~~~~~~~~~~-~------~d~i~~~GD~~~------~~---l~~l~~-----~~~~v~GNhD~~   64 (176)
T 3ck2_A            6 KQTIIVMSDSHGDSLIVEEVRDRYVG-K------VDAVFHNGDSEL------RP---DSPLWE-----GIRVVKGNMDFY   64 (176)
T ss_dssp             CEEEEEECCCTTCHHHHHHHHHHHTT-T------SSEEEECSCCCS------CT---TCGGGT-----TEEECCCTTCCS
T ss_pred             CcEEEEEecCCCCHHHHHHHHHHhhc-C------CCEEEECCCCch------HH---HHhhhC-----CeEEecCcccch
Confidence            47999999999999999999998853 2      489999999721      11   222221     489999999975


Q ss_pred             h
Q 025290           84 F   84 (255)
Q Consensus        84 ~   84 (255)
                      .
T Consensus        65 ~   65 (176)
T 3ck2_A           65 A   65 (176)
T ss_dssp             T
T ss_pred             h
Confidence            3

>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A

Probab=98.72  E-value=7.2e-09  Score=86.37  Aligned_cols=65  Identities=25%  Similarity=0.344  Sum_probs=46.3

Q ss_pred             CCeEEEEccCCCCHH--HHHH-HHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCc
Q 025290            4 PRRVCCIGDVHGYIS--KLQN-LWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNH   80 (255)
Q Consensus         4 ~~ri~vigDIHG~~~--~l~~-lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNH   80 (255)
                      +||+++|||+|++..  .+.+ +.+.+...      ..|.+|++||+++     .++++.+.++..     .+++|+|||
T Consensus        10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~------~~d~ii~~GDl~~-----~~~~~~l~~~~~-----~~~~v~GNh   73 (192)
T 1z2w_A           10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPG------KIQHILCTGNLCT-----KESYDYLKTLAG-----DVHIVRGDF   73 (192)
T ss_dssp             -CEEEEECCCCBTTTCSSCCHHHHTTCCTT------SCSEEEECSCCBS-----HHHHHHHHHHCS-----EEEECCCTT
T ss_pred             ceEEEEEecCCCCccchhHHHHHHHHhccC------CCCEEEEcCCCCC-----HHHHHHHHhcCC-----CEEEEcCCc
Confidence            589999999998642  2322 32222211      2489999999996     678888887653     589999999


Q ss_pred             ccch
Q 025290           81 DLGF   84 (255)
Q Consensus        81 E~~~   84 (255)
                      |...
T Consensus        74 D~~~   77 (192)
T 1z2w_A           74 DENL   77 (192)
T ss_dssp             CCCT
T ss_pred             Cccc
Confidence            9764

>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A

Probab=98.66  E-value=2.3e-08  Score=90.18  Aligned_cols=73  Identities=23%  Similarity=0.332  Sum_probs=50.1

Q ss_pred             CCCeEEEEccCC-C----C-----------HHHHHHHHHHhhhccCCCCCCCcEEEEeCC-cCCCCCChHH----HHHHH
Q 025290            3 RPRRVCCIGDVH-G----Y-----------ISKLQNLWKNLETHIGPSDFNSAIIIFLGD-YCDRGPNTRE----VIDFL   61 (255)
Q Consensus         3 ~~~ri~vigDIH-G----~-----------~~~l~~lL~~~~~~~~~~~~~~d~li~lGD-lvDrG~~s~~----vl~~l   61 (255)
                      .+||++.+||+| |    .           ...|.++++.+....+      |.+|++|| ++|++..+.+    +.+++
T Consensus        17 ~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~------D~vliaGD~l~d~~~~~~~~~~~~~~~l   90 (336)
T 2q8u_A           17 KELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREV------DLILLTGDLLHSRNNPSVVALHDLLDYL   90 (336)
T ss_dssp             CEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTC------SEEEEESCSBSCSSCCCHHHHHHHHHHH
T ss_pred             CceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCC------CEEEECCccccCCCCCCHHHHHHHHHHH
Confidence            468999999999 7    3           4567788877765543      89999999 9999876544    45666


Q ss_pred             HhCCCCCCCCcEEEECCCcccch
Q 025290           62 ISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus        62 ~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .++....   .+++|.||||...
T Consensus        91 ~~L~~~~---pv~~i~GNHD~~~  110 (336)
T 2q8u_A           91 KRMMRTA---PVVVLPGNHDWKG  110 (336)
T ss_dssp             HHHHHHS---CEEECCC------
T ss_pred             HHHHhcC---CEEEECCCCCccc
Confidence            6664222   4999999999754

>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A

Probab=98.63  E-value=5.8e-08  Score=86.01  Aligned_cols=76  Identities=22%  Similarity=0.327  Sum_probs=51.9

Q ss_pred             CCCeEEEEccCCCC------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH--HHHHHHHhCCCCC
Q 025290            3 RPRRVCCIGDVHGY------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR--EVIDFLISLPTKY   68 (255)
Q Consensus         3 ~~~ri~vigDIHG~------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~--~vl~~l~~l~~~~   68 (255)
                      ..||+++|||+|..            ...|.++++.+.....    ..|.+|++||+++.|....  .+.+.+..+....
T Consensus        24 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~----~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~   99 (330)
T 3ib7_A           24 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGL----RPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQL   99 (330)
T ss_dssp             CSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTC----CCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCC----CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhc
Confidence            36899999999963            6788888888865211    2489999999999886321  3344444331100


Q ss_pred             CCCcEEEECCCcccc
Q 025290           69 PNQKHVFLSGNHDLG   83 (255)
Q Consensus        69 p~~~v~~i~GNHE~~   83 (255)
                       +..+++|+||||..
T Consensus       100 -~~pv~~v~GNHD~~  113 (330)
T 3ib7_A          100 -GAELVWVMGNHDDR  113 (330)
T ss_dssp             -TCEEEECCCTTSCH
T ss_pred             -CCCEEEeCCCCCCH
Confidence             12599999999963

>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*

Probab=98.61  E-value=4.5e-08  Score=90.22  Aligned_cols=74  Identities=18%  Similarity=0.204  Sum_probs=53.0

Q ss_pred             CCCeEEEEccCCCCH-------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-CChH---HHHHHHHhCC
Q 025290            3 RPRRVCCIGDVHGYI-------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-PNTR---EVIDFLISLP   65 (255)
Q Consensus         3 ~~~ri~vigDIHG~~-------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-~~s~---~vl~~l~~l~   65 (255)
                      .+|||+++||+|...             ..|.++++.+....      .|.+|++||++|.+ |.+.   .+.+++.++.
T Consensus        19 ~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~------~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~   92 (386)
T 3av0_A           19 SHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIK------PDVVLHSGDLFNDLRPPVKALRIAMQAFKKLH   92 (386)
T ss_dssp             CCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTC------CSEEEECSCSBSSSSCCHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcC------CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            468999999999762             46778887776543      38999999999988 4322   2455555553


Q ss_pred             CCCCCCcEEEECCCcccch
Q 025290           66 TKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus        66 ~~~p~~~v~~i~GNHE~~~   84 (255)
                      ..  +..+++|.||||...
T Consensus        93 ~~--~~pv~~v~GNHD~~~  109 (386)
T 3av0_A           93 EN--NIKVYIVAGNHEMPR  109 (386)
T ss_dssp             HT--TCEEEECCCGGGSCS
T ss_pred             hc--CCcEEEEcCCCCCCc
Confidence            21  125999999999753

>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*

Probab=98.55  E-value=5e-08  Score=87.42  Aligned_cols=65  Identities=26%  Similarity=0.568  Sum_probs=48.9

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--HHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--REVIDFLISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--~~vl~~l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      .|||++|||+|++...+     .+  .      ..|.+|++||+++.|...  .++++++.++...    .+++|.||||
T Consensus        59 ~mri~~iSD~H~~~~~l-----~i--~------~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l~~~----~v~~V~GNHD  121 (296)
T 3rl5_A           59 HTRFVCISDTRSRTDGI-----QM--P------YGDILLHTGDFTELGLPSEVKKFNDWLGNLPYE----YKIVIAGNHE  121 (296)
T ss_dssp             EEEEEEEBCCTTCCTTC-----CC--C------SCSEEEECSCCSSSCCHHHHHHHHHHHHTSCCS----EEEECCCTTC
T ss_pred             CeEEEEEeeCCCCcchh-----cc--C------CCCEEEECCcccCCCCHHHHHHHHHHHHhCCCC----eEEEEcCCcc
Confidence            38999999999997543     11  1      249999999999998742  4567777776432    4899999999


Q ss_pred             cchh
Q 025290           82 LGFA   85 (255)
Q Consensus        82 ~~~~   85 (255)
                      ..+-
T Consensus       122 ~~~d  125 (296)
T 3rl5_A          122 LTFD  125 (296)
T ss_dssp             GGGC
T ss_pred             cccc
Confidence            8653

>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A

Probab=98.53  E-value=1.7e-07  Score=84.44  Aligned_cols=71  Identities=17%  Similarity=0.201  Sum_probs=49.7

Q ss_pred             CeEEEEccCCCCH-------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH----HHHHHHHhCCCC
Q 025290            5 RRVCCIGDVHGYI-------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR----EVIDFLISLPTK   67 (255)
Q Consensus         5 ~ri~vigDIHG~~-------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~----~vl~~l~~l~~~   67 (255)
                      ||++++||+|...             ..|.++++.+....      .|.++++||++|++..+.    .+.+.+..+...
T Consensus         1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~   74 (333)
T 1ii7_A            1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQEN------VDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEH   74 (333)
T ss_dssp             CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTT------CSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcC------CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHC
Confidence            6899999999764             45667777765543      389999999999873332    233445554321


Q ss_pred             CCCCcEEEECCCcccc
Q 025290           68 YPNQKHVFLSGNHDLG   83 (255)
Q Consensus        68 ~p~~~v~~i~GNHE~~   83 (255)
                        +..+++|.||||..
T Consensus        75 --~~~v~~v~GNHD~~   88 (333)
T 1ii7_A           75 --SIPVFAIEGNHDRT   88 (333)
T ss_dssp             --TCCEEEECCTTTCC
T ss_pred             --CCcEEEeCCcCCCc
Confidence              12599999999975

>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12

Probab=98.50  E-value=9.3e-08  Score=83.72  Aligned_cols=70  Identities=19%  Similarity=0.110  Sum_probs=50.9

Q ss_pred             CCCeEEEEccCCCCH-------------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC----hH----
Q 025290            3 RPRRVCCIGDVHGYI-------------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN----TR----   55 (255)
Q Consensus         3 ~~~ri~vigDIHG~~-------------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~----s~----   55 (255)
                      ..+|+++|||+|...                   ..|.++++.+....      .|.+|++||+++.+..    ..    
T Consensus         4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~d~vi~~GD~~~~~~~~~~~~~~~~~   77 (322)
T 2nxf_A            4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRER------VQCVVQLGDIIDGHNRRRDASDRALD   77 (322)
T ss_dssp             CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTT------CSEEEECSCCBCTHHHHTTCHHHHHH
T ss_pred             CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcC------CCEEEECCCccCCCCCcchHHHHHHH
Confidence            468999999999765                   56777887775532      3899999999998741    12    


Q ss_pred             HHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290           56 EVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        56 ~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .+++.+.++.     ..+++++||||..
T Consensus        78 ~~~~~l~~~~-----~p~~~v~GNHD~~  100 (322)
T 2nxf_A           78 TVMAELDACS-----VDVHHVWGNHEFY  100 (322)
T ss_dssp             HHHHHHHTTC-----SEEEECCCHHHHH
T ss_pred             HHHHHHHhcC-----CcEEEecCCCCcc
Confidence            2444554443     2599999999984

>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}

Probab=98.44  E-value=4e-07  Score=84.63  Aligned_cols=72  Identities=21%  Similarity=0.377  Sum_probs=50.9

Q ss_pred             CCeEEEEccCCCC--------------------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--H
Q 025290            4 PRRVCCIGDVHGY--------------------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--R   55 (255)
Q Consensus         4 ~~ri~vigDIHG~--------------------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--~   55 (255)
                      ++||++|||+|..                          ...+.++++.+....      .|.+|++||+++.|...  .
T Consensus        39 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~d~vi~~GDl~~~~~~~~~~  112 (443)
T 2xmo_A           39 NLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKK------TDVLIISGDLTNNGEKTSHE  112 (443)
T ss_dssp             CEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHT------CSEEEEESCCBSSCCHHHHH
T ss_pred             CeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcC------CCEEEECCCCCCCCCHHHHH
Confidence            5799999999964                          446777777775443      38999999999988643  3


Q ss_pred             HHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290           56 EVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        56 ~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      ++.+.+..+...  +..+++|+||||..
T Consensus       113 ~~~~~l~~l~~~--~~~~~~v~GNHD~~  138 (443)
T 2xmo_A          113 ELAKKLTQVEKN--GTQVFVVPGNHDIN  138 (443)
T ss_dssp             HHHHHHHHHHHT--TCEEEEECCTTTSS
T ss_pred             HHHHHHHHHHhC--CCeEEEECCcCCCC
Confidence            344555554211  12589999999975

>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C

Probab=98.29  E-value=5.5e-07  Score=82.91  Aligned_cols=73  Identities=21%  Similarity=0.264  Sum_probs=50.2

Q ss_pred             CeEEEEccCCCCHH----------------HHHHHHHHhhhccCCCCCCCcEEEEeCCcC-CCCCChHH----HHHHHHh
Q 025290            5 RRVCCIGDVHGYIS----------------KLQNLWKNLETHIGPSDFNSAIIIFLGDYC-DRGPNTRE----VIDFLIS   63 (255)
Q Consensus         5 ~ri~vigDIHG~~~----------------~l~~lL~~~~~~~~~~~~~~d~li~lGDlv-DrG~~s~~----vl~~l~~   63 (255)
                      ||++.+||+|....                .|.++++.+....+      |.+|++||++ |++..+.+    +.+++..
T Consensus         1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~------D~vliaGDl~hd~~~~~~~~~~~~~~~l~~   74 (379)
T 3tho_B            1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREV------DLILLTGDLLHSRNNPSVVALHDLLDYLKR   74 (379)
T ss_dssp             CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTC------SEEEECSCCBSCSSSCCHHHHHHHHHHHHH
T ss_pred             CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCC------CEEEECCCccccCCCCCHHHHHHHHHHHHH
Confidence            79999999996543                66777776655433      8999999999 87654433    3344444


Q ss_pred             CCCCCCCCcEEEECCCcccchhh
Q 025290           64 LPTKYPNQKHVFLSGNHDLGFAA   86 (255)
Q Consensus        64 l~~~~p~~~v~~i~GNHE~~~~~   86 (255)
                      +....   .+++|.||||..-+.
T Consensus        75 l~~~~---~v~~i~GNHD~~~~~   94 (379)
T 3tho_B           75 MMRTA---PVVVLPGNQDWKGLK   94 (379)
T ss_dssp             HHHHS---CEEECCCTTSCTTHH
T ss_pred             HHhCC---CEEEEcCCCccccCc
Confidence            43222   499999999965443

>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*

Probab=98.21  E-value=1.7e-06  Score=80.93  Aligned_cols=76  Identities=17%  Similarity=0.150  Sum_probs=53.3

Q ss_pred             CCCeEEEEccCCCC------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHH----HHHHHh---
Q 025290            3 RPRRVCCIGDVHGY------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREV----IDFLIS---   63 (255)
Q Consensus         3 ~~~ri~vigDIHG~------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~v----l~~l~~---   63 (255)
                      .+||++.+||+|-.            ...|.++++.+....      .|.++++||++|++..+.++    ++.+.+   
T Consensus        12 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~------~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~   85 (417)
T 4fbw_A           12 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERD------VDMILLGGDIFHDNKPSRKALYQALRSLRLNCL   85 (417)
T ss_dssp             TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTT------CSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHB
T ss_pred             CCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcC------CCEEEEcCccccCCCCCHHHHHHHHHHHHHhcc
Confidence            46899999999954            356788888876644      39999999999998776554    333333   


Q ss_pred             ---------CCCC-------------------CCCCcEEEECCCcccch
Q 025290           64 ---------LPTK-------------------YPNQKHVFLSGNHDLGF   84 (255)
Q Consensus        64 ---------l~~~-------------------~p~~~v~~i~GNHE~~~   84 (255)
                               |...                   ..+..|++|.||||...
T Consensus        86 g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~  134 (417)
T 4fbw_A           86 GDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPS  134 (417)
T ss_dssp             SSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC--
T ss_pred             cCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcc
Confidence                     3311                   12457999999999753

>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*

Probab=98.19  E-value=2.2e-06  Score=81.17  Aligned_cols=50  Identities=14%  Similarity=0.169  Sum_probs=39.0

Q ss_pred             CCeEEEEccCCCC------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHH
Q 025290            4 PRRVCCIGDVHGY------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVID   59 (255)
Q Consensus         4 ~~ri~vigDIHG~------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~   59 (255)
                      +||++.+||+|-.            ...|.++++.+....      .|.+|++||++|++..+.+++.
T Consensus        76 ~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~------~D~VliaGDLfd~~~ps~~a~~  137 (472)
T 4fbk_A           76 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERD------VDMILLGGDIFHDNKPSRKALY  137 (472)
T ss_dssp             CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTT------CSEEEECSCSBSSSSCCHHHHH
T ss_pred             CeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcC------CCEEEEcCccccCCCCCHHHHH
Confidence            6899999999954            346788888886644      3999999999999877655433

>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}

Probab=98.11  E-value=2.4e-06  Score=80.20  Aligned_cols=50  Identities=14%  Similarity=0.243  Sum_probs=38.0

Q ss_pred             CCeEEEEccCCCC------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHH
Q 025290            4 PRRVCCIGDVHGY------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVID   59 (255)
Q Consensus         4 ~~ri~vigDIHG~------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~   59 (255)
                      +|||+.+||+|-.            ...|.++++.+....      .|.++++||++|++..+.+++.
T Consensus        32 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~------~D~VliaGDlfd~~~~~~~~~~   93 (431)
T 3t1i_A           32 TFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENE------VDFILLGGDLFHENKPSRKTLH   93 (431)
T ss_dssp             EEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTT------CSEEEECSCCBSSSSCCHHHHH
T ss_pred             CEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcC------CCEEEEcCccccCCCCCHHHHH
Confidence            5899999999943            236788888776644      3899999999999876654433

>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*

Probab=97.95  E-value=1.1e-05  Score=70.09  Aligned_cols=75  Identities=20%  Similarity=0.159  Sum_probs=44.1

Q ss_pred             CCCeEEEEccCCCCH---------HHHHHHHHH-hhhccCCCCCCCcEEEEeCCcCCCC-C---ChHHHHHHHHhCCCC-
Q 025290            3 RPRRVCCIGDVHGYI---------SKLQNLWKN-LETHIGPSDFNSAIIIFLGDYCDRG-P---NTREVIDFLISLPTK-   67 (255)
Q Consensus         3 ~~~ri~vigDIHG~~---------~~l~~lL~~-~~~~~~~~~~~~d~li~lGDlvDrG-~---~s~~vl~~l~~l~~~-   67 (255)
                      ..+|+++|||+|...         ..+.+.+.. +....      .|.+|++||+++.. .   ...+..+.+..+... 
T Consensus         5 ~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~------~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~   78 (313)
T 1ute_A            5 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLG------ADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDP   78 (313)
T ss_dssp             CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHC------CSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSG
T ss_pred             CceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcC------CCEEEECCCccCcCCCCCcchHHHHHHHHHHcCch
Confidence            467999999999763         234343433 33222      38999999997531 1   122344444332210 


Q ss_pred             -CCCCcEEEECCCcccc
Q 025290           68 -YPNQKHVFLSGNHDLG   83 (255)
Q Consensus        68 -~p~~~v~~i~GNHE~~   83 (255)
                       ..+..+++++||||..
T Consensus        79 ~l~~~p~~~v~GNHD~~   95 (313)
T 1ute_A           79 SLRNVPWHVLAGNHDHL   95 (313)
T ss_dssp             GGTTCCEEECCCHHHHH
T ss_pred             hhcCCCEEEECCCCccC
Confidence             1012599999999974

>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*

Probab=97.70  E-value=3.8e-05  Score=71.08  Aligned_cols=72  Identities=17%  Similarity=0.217  Sum_probs=46.6

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh-------HHHHHHHHhCCCCCCCCcEEEE
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT-------REVIDFLISLPTKYPNQKHVFL   76 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s-------~~vl~~l~~l~~~~p~~~v~~i   76 (255)
                      ++|++++||+|....... +++.+.....    ..|.+|++||+++.+...       .+..+++..+....   .++++
T Consensus       119 ~~~f~~igD~~~~~~~~~-~l~~~~~~~~----~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~---P~~~v  190 (424)
T 2qfp_A          119 PYTFGLIGDLGQSFDSNT-TLSHYELSPK----KGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQ---PWIWT  190 (424)
T ss_dssp             CEEEEEECSCTTBHHHHH-HHHHHHTCSS----CCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTS---CEEEC
T ss_pred             CeEEEEEEeCCCCCChHH-HHHHHHhCCC----CCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcC---CeEee
Confidence            579999999998866543 4555543211    248999999999854211       12233444443334   48999


Q ss_pred             CCCcccc
Q 025290           77 SGNHDLG   83 (255)
Q Consensus        77 ~GNHE~~   83 (255)
                      .||||..
T Consensus       191 ~GNHD~~  197 (424)
T 2qfp_A          191 AGNHEIE  197 (424)
T ss_dssp             CCHHHHC
T ss_pred             cCCcccc
Confidence            9999975

>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1

Probab=97.53  E-value=0.0001  Score=68.31  Aligned_cols=73  Identities=18%  Similarity=0.299  Sum_probs=45.5

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-----h--HHHHHHHHhCCCCCCCCcEEEE
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-----T--REVIDFLISLPTKYPNQKHVFL   76 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s--~~vl~~l~~l~~~~p~~~v~~i   76 (255)
                      +.|++++||+|..... ...++.+.....    ..|.+|++||+++....     .  .+..+.+..+....|   ++++
T Consensus       126 ~~~f~~~gD~~~~~~~-~~~l~~i~~~~~----~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P---~~~v  197 (426)
T 1xzw_A          126 PYVFGLIGDIGQTHDS-NTTLTHYEQNSA----KGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQP---WIWT  197 (426)
T ss_dssp             CEEEEEECSCTTBHHH-HHHHHHHHHCTT----CCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSC---EECC
T ss_pred             CeEEEEEEeCCCCCch-HHHHHHHHhCCC----CCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCC---EEEe
Confidence            4799999999987533 344545443211    24899999999965321     1  112334444433344   8999


Q ss_pred             CCCcccch
Q 025290           77 SGNHDLGF   84 (255)
Q Consensus        77 ~GNHE~~~   84 (255)
                      .||||...
T Consensus       198 ~GNHD~~~  205 (426)
T 1xzw_A          198 AGNHEIDY  205 (426)
T ss_dssp             CCGGGCCC
T ss_pred             cccccccc
Confidence            99999753

>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}

Probab=97.29  E-value=0.0002  Score=68.41  Aligned_cols=68  Identities=22%  Similarity=0.351  Sum_probs=49.8

Q ss_pred             CCeEEEEccCCCCH----------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh----------HHH
Q 025290            4 PRRVCCIGDVHGYI----------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT----------REV   57 (255)
Q Consensus         4 ~~ri~vigDIHG~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s----------~~v   57 (255)
                      ..+|+.++|+||.+                ..+..+++.++...+     ...++..||+++..|.+          ..+
T Consensus        19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~-----~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~   93 (527)
T 3qfk_A           19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYD-----QSFKIDNGDFLQGSPFCNYLIAHSGSSQPL   93 (527)
T ss_dssp             EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSS-----EEEEEECSCCSSSSHHHHHHHHTTCSSHHH
T ss_pred             cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCC-----CEEEEECCCcCCCcHHHHHHhhcccCcchH
Confidence            46899999999985                367778888765432     34666789999977543          467


Q ss_pred             HHHHHhCCCCCCCCcEEEECCCccc
Q 025290           58 IDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus        58 l~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      ++.+..+...      .++.||||.
T Consensus        94 ~~~ln~lg~D------~~t~GNHef  112 (527)
T 3qfk_A           94 VDFYNRMAFD------FGTLGNHEF  112 (527)
T ss_dssp             HHHHHHTCCC------EECCCGGGG
T ss_pred             HHHHHhcCCc------EEecccccc
Confidence            8888877642      467899994

>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9

Probab=97.28  E-value=0.00034  Score=61.99  Aligned_cols=72  Identities=19%  Similarity=0.261  Sum_probs=52.7

Q ss_pred             CCCCCeEEEEccCCCCH--HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-CChHHHHHHHHhCCCCCCCCcEEEEC
Q 025290            1 MSRPRRVCCIGDVHGYI--SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-PNTREVIDFLISLPTKYPNQKHVFLS   77 (255)
Q Consensus         1 ~~~~~ri~vigDIHG~~--~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-~~s~~vl~~l~~l~~~~p~~~v~~i~   77 (255)
                      |.+.|||+++|||||..  ..+...++.++....     .+.+++.||-.-.| +.+..+.+.+..+...     + ...
T Consensus         1 ~~~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~-----~d~vi~Ngen~~gG~g~~~~~~~~ln~~G~D-----a-~Tl   69 (281)
T 1t71_A            1 MMNSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQ-----ADLVIVNAENTTHGKGLSLKHYEFLKEAGVN-----Y-ITM   69 (281)
T ss_dssp             CCCCCEEEEECEEBHHHHHHHHHTTHHHHHHHHT-----CSEEEEECTBTTTTSSCCHHHHHHHHHHTCC-----E-EEC
T ss_pred             CcceEEEEEECCcCChHHHHHHHHHHHHHHHhcC-----CCEEEEcCCCCCCCCCcCHHHHHHHHhcCCC-----E-EEE
Confidence            56789999999999884  445566776655321     37888888887655 5577889999888753     3 466


Q ss_pred             CCcccc
Q 025290           78 GNHDLG   83 (255)
Q Consensus        78 GNHE~~   83 (255)
                      ||||+-
T Consensus        70 GNHefD   75 (281)
T 1t71_A           70 GNHTWF   75 (281)
T ss_dssp             CTTTTC
T ss_pred             ccCccc
Confidence            999954

>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}

Probab=97.11  E-value=0.00024  Score=64.56  Aligned_cols=73  Identities=12%  Similarity=0.041  Sum_probs=42.9

Q ss_pred             CCeEEEEccCCCCHHHHHH----HHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH------HHHHHHHhCC-CCCCCCc
Q 025290            4 PRRVCCIGDVHGYISKLQN----LWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR------EVIDFLISLP-TKYPNQK   72 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~----lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~------~vl~~l~~l~-~~~p~~~   72 (255)
                      ..|+++|||.|.....-.+    +.+.+....      .|.+|++||+++.|..+.      +.++.+.... .. -+..
T Consensus         3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~------pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~-~~~P   75 (342)
T 3tgh_A            3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNER------VTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGD-MYMP   75 (342)
T ss_dssp             CEEEEECCSCBSCCHHHHHHHHHHHHHHHHTT------CCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGT-TCSE
T ss_pred             eEEEEEEecCCCCCchHHHHHHHHHHHHhhcC------CCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhh-hCCC
Confidence            4689999999975433222    223332222      489999999998886421      2222222110 00 0235


Q ss_pred             EEEECCCcccc
Q 025290           73 HVFLSGNHDLG   83 (255)
Q Consensus        73 v~~i~GNHE~~   83 (255)
                      ++.|+||||..
T Consensus        76 ~~~vlGNHD~~   86 (342)
T 3tgh_A           76 FFTVLGTRDWT   86 (342)
T ss_dssp             EEECCCHHHHT
T ss_pred             EEEeCCCCccC
Confidence            89999999964

>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A

Probab=97.11  E-value=0.00051  Score=65.31  Aligned_cols=73  Identities=16%  Similarity=0.202  Sum_probs=48.9

Q ss_pred             CCeEEEEccCCCCH----------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHHHHHhCCCCC
Q 025290            4 PRRVCCIGDVHGYI----------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-----TREVIDFLISLPTKY   68 (255)
Q Consensus         4 ~~ri~vigDIHG~~----------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~~l~~l~~~~   68 (255)
                      .++|+.++|+||.+          ..+..+++.++...... .+.+.++..||+++..+.     ...+++.+..+..  
T Consensus         8 ~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~-~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg~--   84 (516)
T 1hp1_A            8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAE-GGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY--   84 (516)
T ss_dssp             EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHH-TCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHTC--
T ss_pred             EEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhcc-CCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccCC--
Confidence            46899999999974          35667776665431000 013689999999986542     2466777777753  


Q ss_pred             CCCcEEEECCCcccc
Q 025290           69 PNQKHVFLSGNHDLG   83 (255)
Q Consensus        69 p~~~v~~i~GNHE~~   83 (255)
                          .+++.||||..
T Consensus        85 ----d~~~~GNHEfd   95 (516)
T 1hp1_A           85 ----DAMAIGNHEFD   95 (516)
T ss_dssp             ----CEEECCGGGGS
T ss_pred             ----CEEeecccccc
Confidence                25789999973

>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2

Probab=97.07  E-value=0.00096  Score=64.12  Aligned_cols=69  Identities=14%  Similarity=0.191  Sum_probs=50.9

Q ss_pred             CCeEEEEccCCCC-----------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHHHH
Q 025290            4 PRRVCCIGDVHGY-----------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-----TREVIDFL   61 (255)
Q Consensus         4 ~~ri~vigDIHG~-----------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~~l   61 (255)
                      ..+|+.++|+||.                 +..+..+++.++...+     +..++..||++++.+.     ...+++.+
T Consensus        29 ~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~-----~~l~l~~GD~~~gs~~~~~~~~~~~~~~l  103 (552)
T 2z1a_A           29 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAK-----NPLFLDAGDVFQGTLYFNQYRGLADRYFM  103 (552)
T ss_dssp             EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSS-----SEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred             eEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCC-----CEEEEeCCCCCCCcHHHHHhCCcHHHHHH
Confidence            4689999999975                 3577888888776533     3477889999997653     34677777


Q ss_pred             HhCCCCCCCCcEEEECCCcccc
Q 025290           62 ISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        62 ~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      ..+..      -+++.||||..
T Consensus       104 n~lg~------d~~~lGNHEfd  119 (552)
T 2z1a_A          104 HRLRY------RAMALGNHEFD  119 (552)
T ss_dssp             HHTTC------CEEECCGGGGT
T ss_pred             HhcCC------Ccccccccccc
Confidence            77753      25788999964

>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*

Probab=96.95  E-value=0.00085  Score=63.85  Aligned_cols=67  Identities=22%  Similarity=0.382  Sum_probs=46.5

Q ss_pred             CCeEEEEccCCCC------------------HHHHHHHHHHhhhccCCCCCCCcEEEE-eCCcCCCCC-----ChHHHHH
Q 025290            4 PRRVCCIGDVHGY------------------ISKLQNLWKNLETHIGPSDFNSAIIIF-LGDYCDRGP-----NTREVID   59 (255)
Q Consensus         4 ~~ri~vigDIHG~------------------~~~l~~lL~~~~~~~~~~~~~~d~li~-lGDlvDrG~-----~s~~vl~   59 (255)
                      ..+|+.++|+||+                  +..+..+++.++...+      +.+++ .||+++..+     ....+++
T Consensus         6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~------~~llldaGD~~~g~~~~~~~~g~~~~~   79 (509)
T 3ive_A            6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNK------ATWFFDAGDYFTGPYISSLTKGKAIID   79 (509)
T ss_dssp             EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCS------SEEEEECSCCSSSSHHHHTTTTHHHHH
T ss_pred             EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCC------CeEEEECCCCCCCchhhhhcCChHHHH
Confidence            4689999999976                  4567778887776543      45555 999998432     1245677


Q ss_pred             HHHhCCCCCCCCcEEEECCCccc
Q 025290           60 FLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus        60 ~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      .+..+..      -++..||||+
T Consensus        80 ~ln~lg~------D~~tlGNHEf   96 (509)
T 3ive_A           80 IMNTMPF------DAVTIGNHEF   96 (509)
T ss_dssp             HHTTSCC------SEECCCGGGG
T ss_pred             HHHhcCC------cEEeeccccc
Confidence            7766653      2456899994

>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*

Probab=96.80  E-value=0.0024  Score=61.72  Aligned_cols=67  Identities=18%  Similarity=0.258  Sum_probs=49.0

Q ss_pred             CeEEEEccCCCC---------------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCC-----ChHHHH
Q 025290            5 RRVCCIGDVHGY---------------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGP-----NTREVI   58 (255)
Q Consensus         5 ~ri~vigDIHG~---------------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~-----~s~~vl   58 (255)
                      .+|+.++|+||+                     +..+..+++.++...+     ...++..||+++..+     ....++
T Consensus        13 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~-----~~l~l~~GD~~~gs~~~~~~~g~~~~   87 (579)
T 3ztv_A           13 LSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYK-----NPLVLHAGDAITGTLYFTLFGGSADA   87 (579)
T ss_dssp             EEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSS-----SEEEEECSCCSCSSHHHHTTTTHHHH
T ss_pred             EEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCC-----CEEEEeCCCCCCCceeeeecCCHHHH
Confidence            689999999987                     4456777777766543     357888999998664     235677


Q ss_pred             HHHHhCCCCCCCCcEEEECCCccc
Q 025290           59 DFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus        59 ~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      +.+..+...      .+..||||+
T Consensus        88 ~~ln~lg~D------~~tlGNHEf  105 (579)
T 3ztv_A           88 AVMNAGNFH------YFTLGNHEF  105 (579)
T ss_dssp             HHHHHHTCS------EEECCSGGG
T ss_pred             HHHHhcCcC------eeecccccc
Confidence            777777642      467899995

>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*

Probab=96.80  E-value=0.0018  Score=62.23  Aligned_cols=68  Identities=19%  Similarity=0.268  Sum_probs=51.0

Q ss_pred             CeEEEEccCCCC--------------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHH
Q 025290            5 RRVCCIGDVHGY--------------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-----TREVID   59 (255)
Q Consensus         5 ~ri~vigDIHG~--------------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~   59 (255)
                      .+|+.++|+||.                    +..+..+++.++...+     ++.++..||+++..+.     ...+++
T Consensus        26 l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~-----~~l~l~~GD~~~g~~~~~~~~g~~~~~  100 (546)
T 4h2g_A           26 LTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEP-----NVLLLDAGDQYQGTIWFTVYKGAEVAH  100 (546)
T ss_dssp             EEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCS-----SEEEEECSCCSSSSHHHHHHTTHHHHH
T ss_pred             EEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCC-----CEEEEECCccCCCchhhhhhCChHHHH
Confidence            589999999975                    4667778888776543     4688899999997753     256777


Q ss_pred             HHHhCCCCCCCCcEEEECCCcccc
Q 025290           60 FLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        60 ~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .+..+...      +++.||||+.
T Consensus       101 ~ln~lg~d------~~~~GNHEfd  118 (546)
T 4h2g_A          101 FMNALRYD------AMALGNHEFD  118 (546)
T ss_dssp             HHHHHTCS------EEECCGGGGT
T ss_pred             HHHhcCCc------EEeccCcccc
Confidence            78777642      4778999953

>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}

Probab=96.53  E-value=0.0039  Score=56.44  Aligned_cols=68  Identities=19%  Similarity=0.270  Sum_probs=47.0

Q ss_pred             CeEEEEccCCCCH----------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH-------------
Q 025290            5 RRVCCIGDVHGYI----------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR-------------   55 (255)
Q Consensus         5 ~ri~vigDIHG~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~-------------   55 (255)
                      .+|+.++|+||++                ..+..+++.++...+     +..++..||++...+.+.             
T Consensus         9 l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~-----n~llld~GD~~qGs~~~~~~~~~~~~~g~~~   83 (339)
T 3jyf_A            9 LRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVK-----NSVLVDNGDVIQGSPLGDYMAAKGLKEGDVH   83 (339)
T ss_dssp             EEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCS-----CEEEEECSCCSSSSHHHHHHHHHCCCTTCCC
T ss_pred             EEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCC-----CEEEEECCCCCCCchhHHhhhhcccccccch
Confidence            5789999999875                456777887776533     357788999997554321             


Q ss_pred             HHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290           56 EVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        56 ~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      .+++.+..+..     . .+..||||+.
T Consensus        84 p~~~~mn~lg~-----D-~~t~GNHEfd  105 (339)
T 3jyf_A           84 PVYKAMNTLNY-----A-VGNLGNHEFN  105 (339)
T ss_dssp             HHHHHHTTSCC-----S-EEECCGGGGT
T ss_pred             HHHHHHHhcCC-----C-EEecchhhhh
Confidence            35666666654     2 3567999953

>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}

Probab=96.50  E-value=0.0037  Score=56.62  Aligned_cols=68  Identities=16%  Similarity=0.280  Sum_probs=47.9

Q ss_pred             CeEEEEccCCCCH----------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--------------
Q 025290            5 RRVCCIGDVHGYI----------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--------------   54 (255)
Q Consensus         5 ~ri~vigDIHG~~----------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--------------   54 (255)
                      .+|+.++|+||++                ..+..+++.++...+     +..++..||++...|.+              
T Consensus        12 l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~-----~~llld~GD~~qGs~~~~~~~~~~~~~g~~~   86 (341)
T 3gve_A           12 LSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNP-----NTLLVDNGDLIQGNPLGEYAVKYQKDDIISG   86 (341)
T ss_dssp             EEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCS-----SEEEEECSCCSCSSHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCC-----CEEEEecCccCCCcHHHHHhhhccccccccc
Confidence            5799999999875                556778877776543     35677899999765432              


Q ss_pred             ---HHHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290           55 ---REVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        55 ---~~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                         ..+++.+..+...      ....||||+.
T Consensus        87 g~~~~~~~~ln~lg~D------a~tlGNHEfd  112 (341)
T 3gve_A           87 TKTHPIISVMNALKYD------AGTLGNHEFN  112 (341)
T ss_dssp             SSCCHHHHHHHHTTCC------BEECCGGGGT
T ss_pred             ccccHHHHHHHhhCCC------eeeccchhhc
Confidence               1366777777642      3568999953

>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2

Probab=96.10  E-value=0.006  Score=58.82  Aligned_cols=70  Identities=19%  Similarity=0.234  Sum_probs=43.8

Q ss_pred             CCeEEEEccCCCCHH-------------HHHHHHHHhhh---ccCCCCCCCcEEEEeCCcCCCCCC-------hHHHHHH
Q 025290            4 PRRVCCIGDVHGYIS-------------KLQNLWKNLET---HIGPSDFNSAIIIFLGDYCDRGPN-------TREVIDF   60 (255)
Q Consensus         4 ~~ri~vigDIHG~~~-------------~l~~lL~~~~~---~~~~~~~~~d~li~lGDlvDrG~~-------s~~vl~~   60 (255)
                      ..+|+.++|+||.+.             .+.++...++.   ...    ++..++..||+++..+.       ...+++.
T Consensus        15 ~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~----~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~   90 (557)
T 3c9f_A           15 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRN----QDLLLIDSGDRHDGNGLSDITSPNGLKSTPI   90 (557)
T ss_dssp             SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTT----CEEEEEECSCCCSSCHHHHSSSSTTTTTHHH
T ss_pred             EEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcC----CCEEEEecCCCCCCccchhhcccCCHHHHHH
Confidence            468999999999742             24444333332   111    12357889999986542       2356777


Q ss_pred             HHhCCCCCCCCcEEEECCCcccc
Q 025290           61 LISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        61 l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      +..+...      .+..||||..
T Consensus        91 ln~lg~D------a~tlGNHEfD  107 (557)
T 3c9f_A           91 FIKQDYD------LLTIGNHELY  107 (557)
T ss_dssp             HTTSCCS------EECCCGGGSS
T ss_pred             HHhcCCC------EEeecchhcc
Confidence            7777642      4578999964

>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9

Probab=95.72  E-value=0.024  Score=49.32  Aligned_cols=66  Identities=24%  Similarity=0.242  Sum_probs=48.9

Q ss_pred             CeEEEEccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCC-CChHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290            5 RRVCCIGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRG-PNTREVIDFLISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         5 ~ri~vigDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG-~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      |||.+||||=|.  ...+..++..++..      . +.+++.|+-+-.| +.+....+.+..+..-     + +..||||
T Consensus         1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~------~-d~vi~nge~~~~G~g~~~~~~~~l~~~G~D-----a-~TlGNHe   67 (255)
T 1t70_A            1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQ------F-DFVIVNMENSAGGFGMHRDAARGALEAGAG-----C-LTLGNHA   67 (255)
T ss_dssp             CEEEEECCBBHHHHHHHHHHHHHHHGGG------C-SEEEEECTBTTTTSSCCHHHHHHHHHHTCS-----E-EECCTTT
T ss_pred             CEEEEEeccCChHHHHHHHHHHHHHHhh------C-CEEEECCCCccCCcCCCHHHHHHHHhCCCC-----E-EEecccc
Confidence            799999999766  56777788887643      1 6777777776555 5677888888888753     4 4569999


Q ss_pred             cc
Q 025290           82 LG   83 (255)
Q Consensus        82 ~~   83 (255)
                      +-
T Consensus        68 fD   69 (255)
T 1t70_A           68 WH   69 (255)
T ss_dssp             TS
T ss_pred             cc
Confidence            65

>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}

Probab=95.67  E-value=0.025  Score=53.81  Aligned_cols=68  Identities=19%  Similarity=0.268  Sum_probs=49.4

Q ss_pred             CeEEEEccCCCC--------------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHH
Q 025290            5 RRVCCIGDVHGY--------------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-----TREVID   59 (255)
Q Consensus         5 ~ri~vigDIHG~--------------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~   59 (255)
                      .+|+.++|+||.                    +..+..++++++...+     +..++..||.+...+.     ...+++
T Consensus         4 LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~-----n~llldaGD~~qGs~~~~~~~g~~~i~   78 (530)
T 4h1s_A            4 LTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEP-----NVLLLDAGDQYQGTIWFTVYKGAEVAH   78 (530)
T ss_dssp             EEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCS-----SEEEEECSCCSCSSHHHHHHTTHHHHH
T ss_pred             EEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCc-----CeEEEEeCCcccchHHHHHhCChHHHH
Confidence            368999999975                    4556777777765543     4577779999987652     356778


Q ss_pred             HHHhCCCCCCCCcEEEECCCcccc
Q 025290           60 FLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        60 ~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                      ++..+..-      ....||||+.
T Consensus        79 ~mN~lgyD------a~~lGNHEFd   96 (530)
T 4h1s_A           79 FMNALRYD------AMALGNHEFD   96 (530)
T ss_dssp             HHHHTTCC------EEECCGGGGT
T ss_pred             HHhccCCC------EEEEchhhhc
Confidence            88887653      4789999964

>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A

Probab=95.23  E-value=0.039  Score=47.97  Aligned_cols=66  Identities=18%  Similarity=0.163  Sum_probs=47.3

Q ss_pred             CeEEEEccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEe-CCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290            5 RRVCCIGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFL-GDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         5 ~ri~vigDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~l-GDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      |||++||||=|.  ...+..+|..++..      . +.+|+. ||....-..+.++.+.+..+..     .+ ...||||
T Consensus         1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~------~-d~vi~ngen~~~G~g~~~~~~~~l~~~G~-----D~-~T~GNHe   67 (252)
T 2z06_A            1 MRVLFIGDVMAEPGLRAVGLHLPDIRDR------Y-DLVIANGENAARGKGLDRRSYRLLREAGV-----DL-VSLGNHA   67 (252)
T ss_dssp             CEEEEECCBCHHHHHHHHHHHHHHHGGG------C-SEEEEECTTTTTTSSCCHHHHHHHHHHTC-----CE-EECCTTT
T ss_pred             CEEEEEEecCCcccHHHHHHHHHHHHhh------C-CEEEEeCCCccCCCCcCHHHHHHHHhCCC-----CE-EEeccEe
Confidence            799999999655  67778888888653      1 556665 4554444467888999988875     34 4679998


Q ss_pred             cc
Q 025290           82 LG   83 (255)
Q Consensus        82 ~~   83 (255)
                      +-
T Consensus        68 fD   69 (252)
T 2z06_A           68 WD   69 (252)
T ss_dssp             TS
T ss_pred             eE
Confidence            54

>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A

Probab=94.54  E-value=0.049  Score=52.45  Aligned_cols=53  Identities=13%  Similarity=0.226  Sum_probs=33.7

Q ss_pred             HHHHHHHhhhc--cCCCCCCCcEEEEeCCcCCCCCCh-----HHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290           20 LQNLWKNLETH--IGPSDFNSAIIIFLGDYCDRGPNT-----REVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus        20 l~~lL~~~~~~--~~~~~~~~d~li~lGDlvDrG~~s-----~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      +..++++++..  .. +  ++..++..||++++.+.+     ..+++++..+..     .+ ++ ||||.
T Consensus       107 la~~v~~~r~~~~~~-g--pd~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~-~~-GNHEf  166 (562)
T 2wdc_A          107 LTALIRDQKARVEAE-G--GKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGV-----DH-MV-SHWEW  166 (562)
T ss_dssp             HHHHHHHHHHHHHHT-T--CCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHTC-----CE-EC-CSGGG
T ss_pred             HHHHHHHHHhhhhcC-C--CCEEEEeCCCCCCcchhhhhhCCHHHHHHHHhhCC-----cE-Ee-cchhc
Confidence            44566666543  20 0  123788899999976532     466778877764     24 46 99996

>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}

Probab=89.78  E-value=0.45  Score=44.93  Aligned_cols=77  Identities=16%  Similarity=0.198  Sum_probs=43.1

Q ss_pred             CCeEEEEccCC--CC----HHHHHHHHHHhhhccCCC-----CCCCcEEEEeCCcCCCCCC-------------------
Q 025290            4 PRRVCCIGDVH--GY----ISKLQNLWKNLETHIGPS-----DFNSAIIIFLGDYCDRGPN-------------------   53 (255)
Q Consensus         4 ~~ri~vigDIH--G~----~~~l~~lL~~~~~~~~~~-----~~~~d~li~lGDlvDrG~~-------------------   53 (255)
                      ...+++|||||  +.    ..+++.+++.+.......     ...-.++|+.||.|+.-..                   
T Consensus       200 ~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~~  279 (476)
T 3e0j_A          200 DRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAAS  279 (476)
T ss_dssp             CCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHHH
T ss_pred             CCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchhh
Confidence            46899999999  32    234455555553221100     0024699999999986311                   


Q ss_pred             --hH-HHHHHHHhCCCCCCCCcEEEECCCcccc
Q 025290           54 --TR-EVIDFLISLPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        54 --s~-~vl~~l~~l~~~~p~~~v~~i~GNHE~~   83 (255)
                        +. ++=.+|.++...   ..|.+++||||-.
T Consensus       280 ~~~~~~ld~~L~~l~~~---i~V~lmPG~~DP~  309 (476)
T 3e0j_A          280 VEAVKMLDEILLQLSAS---VPVDVMPGEFDPT  309 (476)
T ss_dssp             HHHHHHHHHHHHHHHTT---SCEEEECCTTSSS
T ss_pred             HHHHHHHHHHHHhcccC---ceEEecCCCCCcc
Confidence              11 122233333332   3599999999965

>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}

Probab=88.75  E-value=0.46  Score=45.24  Aligned_cols=36  Identities=19%  Similarity=0.331  Sum_probs=26.2

Q ss_pred             CCeEEEEccCC---CCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCC
Q 025290            4 PRRVCCIGDVH---GYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCD   49 (255)
Q Consensus         4 ~~ri~vigDIH---G~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvD   49 (255)
                      +.|++++||.+   |.+..+..+.+    ..      .|.+|++||+|.
T Consensus       116 ~~rfa~~sc~~~~~g~~~~~~~ia~----~~------~D~vlhlGD~iY  154 (527)
T 2yeq_A          116 QMTFAFASCQQYEHGYYTAYKHMAK----EK------LDLVFHLGDYIY  154 (527)
T ss_dssp             CEEEEEECCCCGGGCCCHHHHHHTT----SC------CSEEEECSCSSC
T ss_pred             CeEEEEEecCCCCCCccHHHHHHHh----cC------CCEEEecCCccc
Confidence            57899999987   55666555432    22      489999999994

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	255
d1auia_	473	d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calc	3e-10
d1nnwa_	251	d.159.1.5 (A:) Hypothetical protein PF1291 {Archae	2e-09
d3c5wc1	288	d.159.1.3 (C:6-293) Protein phosphatase 2A catalyt	2e-08
d1g5ba_	219	d.159.1.3 (A:) lambda ser/thr protein phosphatase	4e-08
d1jk7a_	294	d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human	2e-06
d1s95a_	324	d.159.1.3 (A:) Serine/threonine protein phosphatas	7e-06
d1uf3a_	228	d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu	1e-04

>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Length = 473

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 3e-10
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 7/75 (9%)

Query: 7   VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPT 66
           V   GD+HG    L  L    E    P++      +FLGDY DRG  + E + +L +L  
Sbjct: 72  VTVCGDIHGQFFDLMKL---FEVGGSPANTRY---LFLGDYVDRGYFSIECVLYLWALKI 125

Query: 67  KYPNQKHVFLSGNHD 81
            YP      L GNH+
Sbjct: 126 LYPK-TLFLLRGNHE 139

>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 251

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Phosphoesterase-related
domain: Hypothetical protein PF1291
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

 Score = 54.7 bits (130), Expect = 2e-09
 Identities = 21/197 (10%), Positives = 55/197 (27%), Gaps = 9/197 (4%)

Query: 6   RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLP 65
            V  + ++ G +  L      +E  +    +       LG+     P  +EVI+ +  L 
Sbjct: 2   YVAVLANIAGNLPALTAALSRIE-EMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLT 60

Query: 66  TKYPNQKHVFLSGNHDLGFA-----AFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGD 120
                +    + G +D   A     A      +     G  +   ++   +      +  
Sbjct: 61  ---KKENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYL 117

Query: 121 GYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGVAHGSADLVKAVPDHHK 180
               ++L  +  G ++   + +         + +   ++    +       +  V     
Sbjct: 118 RDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMY 177

Query: 181 KFLADMLWVHEEDEVCV 197
              A   +        V
Sbjct: 178 PVDAMTRYGRVVCPGSV 194

>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 7   VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPT 66
           V   GDVHG    L  L++                +F+GDY DRG  + E +  L++L  
Sbjct: 47  VTVCGDVHGQFHDLMELFRIGG------KSPDTNYLFMGDYVDRGYYSVETVTLLVALKV 100

Query: 67  KYPNQKHVFLSGNHD 81
           +Y  +    L GNH+
Sbjct: 101 RYRERIT-ILRGNHE 114

>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} Length = 219

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: lambda ser/thr protein phosphatase
species: Bacteriophage lambda [TaxId: 10710]

 Score = 50.2 bits (119), Expect = 4e-08
 Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 12/103 (11%)

Query: 2   SRPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFL 61
           S+ R +  +GD+HG  + L N    +       D    ++I +GD  DRG    E ++  
Sbjct: 10  SKYRNIWVVGDLHGCYTNLMNKLDTIG-----FDNKKDLLISVGDLVDRGAENVECLEL- 63

Query: 62  ISLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGW 104
                         + GNH+      +         L    GW
Sbjct: 64  ------ITFPWFRAVRGNHEQMMIDGLSERGNVNHWLLNGGGW 100

>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Protein phosphatase-1 (PP-1)
species: Human (Homo sapiens), beta isoform [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 2e-06
 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 7/101 (6%)

Query: 7   VCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPT 66
           +   GD+HG    L  L++             +  +FLGDY DRG  + E I  L++   
Sbjct: 54  LKICGDIHGQYYDLLRLFEY------GGFPPESNYLFLGDYVDRGKQSLETICLLLAYKI 107

Query: 67  KYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQY 107
           KYP      L GNH+      +    +        + WK +
Sbjct: 108 KYPENFF-LLRGNHECASINRIYGFYDECKRRYNIKLWKTF 147

>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Length = 324

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Serine/threonine protein phosphatase 5, PP5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (104), Expect = 7e-06
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 6   RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLP 65
           ++   GD HG    L N+++     +      +   IF GD+ DRG  + EVI  L    
Sbjct: 61  KITVCGDTHGQFYDLLNIFE-----LNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFK 115

Query: 66  TKYPNQKHVFLSGNHD 81
             YP+  H  L GNH+
Sbjct: 116 LLYPDHFH-LLRGNHE 130

>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: TT1561-like
domain: Hypothetical protein TT1561
species: Thermus thermophilus [TaxId: 274]

 Score = 39.7 bits (91), Expect = 1e-04
 Identities = 14/120 (11%), Positives = 30/120 (25%), Gaps = 8/120 (6%)

Query: 3   RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLI 62
             R +    +  G +  L+   K         D  +  I  +G+   +   +R+   F  
Sbjct: 4   TVRYILATSNPMGDLEALEKFVKLAP------DTGADAIALIGNLMPKAAKSRDYAAFFR 57

Query: 63  SLPTKYPNQKHVFLSGNHDLGFAAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGY 122
            L   +      ++ G  D     ++                 +            G G 
Sbjct: 58  ILSEAHLP--TAYVPGPQDAPIWEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGG 115

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	255
d1jk7a_	294	Protein phosphatase-1 (PP-1) {Human (Homo sapiens)	99.9
d3c5wc1	288	Protein phosphatase 2A catalytic subunit alpha iso	99.9
d1auia_	473	Protein phosphatase-2B (PP-2B, calcineurin A subun	99.89
d1s95a_	324	Serine/threonine protein phosphatase 5, PP5 {Human	99.89
d1g5ba_	219	lambda ser/thr protein phosphatase {Bacteriophage	99.87
d1nnwa_	251	Hypothetical protein PF1291 {Archaeon Pyrococcus f	99.77
d1uf3a_	228	Hypothetical protein TT1561 {Thermus thermophilus	99.55
d1su1a_	184	Phosphodiesterase yfcE {Escherichia coli [TaxId: 5	99.37
d1s3la_	165	Putative phosphodiesterase MJ0936 {Methanococcus j	99.17
d2yvta1	257	Uncharacterized protein Aq_1956 {Aquifex aeolicus	99.09
d1z2wa1	182	Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus	98.82
d3ck2a1	173	Uncharacterized protein SP1879 {Streptococcus pneu	98.76
d2a22a1	193	Vacuolar protein sorting 29, VPS29 {Cryptosporidiu	98.61
d1ii7a_	333	Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}	98.6
d3d03a1	271	Glycerophosphodiesterase GpdQ {Enterobacter aeroge	98.47
d1xm7a_	188	Hypothetical protein aq_1666 {Aquifex aeolicus [Ta	98.46
d2hy1a1	256	Rv0805 cyclic nucleotide phosphodiesterase {Mycoba	98.38
d2nxfa1	320	Uncharacterized C17orf48 homolog zgc:64213 {Zebraf	97.94
d1utea_	302	Mammalian purple acid phosphatase {Pig (Sus scrofa	97.45
d2qfra2	312	Plant purple acid phosphatase, catalytic domain {K	97.13
d2z1aa2	302	5'-nucleotidase (syn. UDP-sugar hydrolase), N-term	96.24
d1usha2	337	5'-nucleotidase (syn. UDP-sugar hydrolase), N-term	95.06
d3c9fa2	322	5'-nucleotidase (syn. UDP-sugar hydrolase), N-term	94.89
d1t71a_	281	Hypothetical protein MPN349 {Mycoplasma pneumoniae	94.3
d1t70a_	255	Putative phosphatase DR1281 {Deinococcus radiodura	91.95
d2z06a1	252	Hypothetical protein TTHA0625 {Thermus thermophilu	91.68

>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Protein phosphatase-1 (PP-1)
species: Human (Homo sapiens), beta isoform [TaxId: 9606]

Probab=99.90  E-value=1.4e-24  Score=192.72  Aligned_cols=155  Identities=26%  Similarity=0.375  Sum_probs=116.4

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .+++|||||||++..|.++++..+..+      ...++|||||||||+.|.||+.++..++..+|+ +++++|||||...
T Consensus        52 ~pv~VvGDiHG~~~DL~~if~~~g~p~------~~~ylFLGDYVDRG~~slE~i~lL~aLKi~~P~-~v~lLRGNHE~~~  124 (294)
T d1jk7a_          52 APLKICGDIHGQYYDLLRLFEYGGFPP------ESNYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECAS  124 (294)
T ss_dssp             SSEEEECBCTTCHHHHHHHHHHHCCTT------SSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTT-TEEECCCTTSSHH
T ss_pred             CCeEEEEECCCChHhHHHHHhhcCCCc------cceEEeeccccCCCccchHHHHHHHHHHhhCCC-eEEEecCCccccc
Confidence            468999999999999999999876643      478999999999999999999999999999996 9999999999877


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      +.....         |                                                      ..+....|+ 
T Consensus       125 ~~~~~g---------F------------------------------------------------------~~e~~~~y~-  140 (294)
T d1jk7a_         125 INRIYG---------F------------------------------------------------------YDECKRRYN-  140 (294)
T ss_dssp             HHTTSS---------H------------------------------------------------------HHHHHHHSC-
T ss_pred             cccccc---------c------------------------------------------------------hhHHHhhcC-
Confidence            653221         0                                                      033333343 


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR  244 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~  244 (255)
                              ..+.+...+.++.||++..+++            ++++||||+.|...-.++...+ .|....+.-..+  .
T Consensus       141 --------~~i~~~~~~~F~~LPlaalI~~------------~i~cvHGGi~~~~~~l~~i~~i-~r~~~~~~~~~~--~  197 (294)
T d1jk7a_         141 --------IKLWKTFTDCFNCLPIAAIVDE------------KIFCCHGGLSPDLQSMEQIRRI-MRPTDVPDQGLL--C  197 (294)
T ss_dssp             --------HHHHHHHHHHHTTCCCEEEETT------------TEEEESSCCCTTCCCHHHHHTC-CSSCCCCSSSHH--H
T ss_pred             --------HHHHHHHHHHHhhCceeeEEcC------------eEEEecCcccCCccchhhhhhc-cCCCCCCCcchh--h
Confidence                    1234568889999999998883            8999999999987655555532 122222222222  3


Q ss_pred             ccccCCCcc
Q 025290          245 KNVWDIPEV  253 (255)
Q Consensus       245 ~~~w~~~~~  253 (255)
                      +.+||||+.
T Consensus       198 dllWsDP~~  206 (294)
T d1jk7a_         198 DLLWSDPDK  206 (294)
T ss_dssp             HHHHCEECS
T ss_pred             hhhhcCCcc
Confidence            679999975

>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.8e-24  Score=190.43  Aligned_cols=156  Identities=24%  Similarity=0.380  Sum_probs=116.1

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .+++|||||||++..|.++++..+..      +..+++|+||+||||+.|.||+.++..++..+|+ +++++|||||...
T Consensus        45 ~pv~VvGDlHG~~~DL~~if~~~g~p------~~~~ylFLGDYVDRG~~slEvl~lL~alKi~~P~-~v~lLRGNHE~~~  117 (288)
T d3c5wc1          45 CPVTVCGDVHGQFHDLMELFRIGGKS------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRE-RITILRGNHESRQ  117 (288)
T ss_dssp             SSEEEECBCTTCHHHHHHHHHHHCCT------TTSCEEECSCCCCSSSSHHHHHHHHHHHHHHCTT-TEEECCCTTSSHH
T ss_pred             CCeEEEeeCCCCHHHHHHHHHhcCCC------ccceEEecCcccCCCCcceeHHHHHHHHHhhCCC-eEEEeccCCcccc
Confidence            36899999999999999999887543      2478999999999999999999999999999996 9999999999877


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      ++....         |                                                      ..+....|+.
T Consensus       118 ~~~~~g---------F------------------------------------------------------~~E~~~ky~~  134 (288)
T d3c5wc1         118 ITQVYG---------F------------------------------------------------------YDECLRKYGN  134 (288)
T ss_dssp             HHHHHS---------H------------------------------------------------------HHHHHHHHSS
T ss_pred             cccccC---------c------------------------------------------------------chhhhhhcCc
Confidence            654321         0                                                      0334444442


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR  244 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~  244 (255)
                      +        .+.....+.++.||++..+++            ++++||||+.|...--++...+ .|-...+.  .....
T Consensus       135 ~--------~i~~~~~~~F~~LPlaaiI~~------------~i~cvHGGi~~~~~~~~~i~~i-~r~~~~~~--~~~~~  191 (288)
T d3c5wc1         135 A--------NVWKYFTDLFDYLPLTALVDG------------QIFCLHGGLSPSIDTLDHIRAL-DRLQEVPH--EGPMC  191 (288)
T ss_dssp             S--------HHHHHHHHHHTTSCSEEEETT------------TEEEESSCCCTTCSSHHHHHHS-CCSSSCCS--SSHHH
T ss_pred             H--------HHHHHHHHHHhhccceEEecC------------eEEEecccccCCccchhhHhhc-ccccCCCc--ccccc
Confidence            1        234568899999999988873            8999999999887554444432 11111222  22233


Q ss_pred             ccccCCCcc
Q 025290          245 KNVWDIPEV  253 (255)
Q Consensus       245 ~~~w~~~~~  253 (255)
                      ..+||||+.
T Consensus       192 dllWsDP~~  200 (288)
T d3c5wc1         192 DLLWSDPDD  200 (288)
T ss_dssp             HHHHCEECS
T ss_pred             ccccCCccc
Confidence            779999975

>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.3e-24  Score=199.90  Aligned_cols=155  Identities=23%  Similarity=0.326  Sum_probs=114.8

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .+++|||||||++..|.++++..+..      +..+++|||||||||+.|.||+.+|..++..||+ +++++|||||...
T Consensus        70 ~Pv~VvGDIHGq~~DLl~If~~~G~P------~~~~yLFLGDYVDRG~~SlEvlllL~aLKi~yP~-~V~LLRGNHE~~~  142 (473)
T d1auia_          70 APVTVCGDIHGQFFDLMKLFEVGGSP------ANTRYLFLGDYVDRGYFSIECVLYLWALKILYPK-TLFLLRGNHECRH  142 (473)
T ss_dssp             SSEEEECCCTTCHHHHHHHHHHHCCT------TTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTT-TEEECCCTTSSHH
T ss_pred             CCEEEEEeCCCCHHHHHHHHHHcCCC------CcceEEecCccccCCcccHHHHHHHHHHHHhCCC-eEEEeCCCCccHh
Confidence            46899999999999999999987543      3478999999999999999999999999999996 8999999999887


Q ss_pred             hhhhcCCCCCCCCCcccccccccccchhhcccccCCCcchhhccccccccccceecccccCCcccCcccCcchhhhhcCC
Q 025290           85 AAFVGVLPEPGGGLGFKEGWKQYEQNEEREGWFKGDGYEKMHLQGRRWGGKITVKFNAAKGTEYKGSIYDAAPTFESYGV  164 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~r~~gg~~~~~~~~~~~~~~~~~~~~~~~tl~sy~~  164 (255)
                      +.....         |                                                      ..++...|+ 
T Consensus       143 ~n~~yg---------F------------------------------------------------------~~E~~~ky~-  158 (473)
T d1auia_         143 LTEYFT---------F------------------------------------------------------KQECKIKYS-  158 (473)
T ss_dssp             HHHHSS---------H------------------------------------------------------HHHHHHHSC-
T ss_pred             hhcccc---------c------------------------------------------------------HHHHHHhhc-
Confidence            764332         0                                                      023333333 


Q ss_pred             CcChHHHHhcCCHHHHHHHhcCcceEEecCeeeecCCCccccCeEEEeeeccCCCChHHHHHHhhhccCCCCchhhccCC
Q 025290          165 AHGSADLVKAVPDHHKKFLADMLWVHEEDEVCVETNDGIKHCKLIAVHAGLERGKKVGEQLELLKAKDTRVPKVEALSGR  244 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~~~~~~~~VHAGi~p~~~l~~q~~~~~~r~~~~~~~~~~~~~  244 (255)
                              ..+.....+.++.||++..+++            ++++|||||.|...--++...+ .|-...|.-..  ..
T Consensus       159 --------~~iy~~~~~~F~~LPLAAiI~~------------kifcVHGGIsp~l~~l~dI~~I-~R~~e~p~~~~--~~  215 (473)
T d1auia_         159 --------ERVYDACMDAFDCLPLAALMNQ------------QFLCVHGGLSPEINTLDDIRKL-DRFKEPPAYGP--MC  215 (473)
T ss_dssp             --------HHHHHHHHHHHTTSCCEEEETT------------TEEEESSCCCTTCCSHHHHHHS-CCSSSCCSSSH--HH
T ss_pred             --------HHHHHHHHHHhccchhhhhhcC------------cEEEeeccCCCccCchhhhhhc-ccccCCCCcCc--ee
Confidence                    1334567889999999988873            8999999999986543444322 12122222222  23


Q ss_pred             ccccCCCcc
Q 025290          245 KNVWDIPEV  253 (255)
Q Consensus       245 ~~~w~~~~~  253 (255)
                      +.+|+||..
T Consensus       216 DLLWSDP~~  224 (473)
T d1auia_         216 DILWSDPLE  224 (473)
T ss_dssp             HHHHCEECT
T ss_pred             eeeccCCcc
Confidence            679999964

>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Serine/threonine protein phosphatase 5, PP5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.5e-24  Score=189.51  Aligned_cols=77  Identities=30%  Similarity=0.455  Sum_probs=68.3

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      .+++|||||||++..|.++++..+....     ...++||||+||||+.|.||+.+|..++..+|+ +++++|||||...
T Consensus        60 ~pv~VvGDiHGq~~DL~~if~~~g~p~~-----~~~ylFLGDYVDRG~~slEvi~lL~~lKi~yP~-~v~LLRGNHE~~~  133 (324)
T d1s95a_          60 EKITVCGDTHGQFYDLLNIFELNGLPSE-----TNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPD-HFHLLRGNHETDN  133 (324)
T ss_dssp             CEEEEECCCTTCHHHHHHHHHHHCCCBT-----TBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTT-TEEEECCTTSSHH
T ss_pred             CCEEEEEECCCCHHHHHHHHHHCCCCCC-----CCeEEEecccccCcCcceeehHHHHHHHHhCCC-cEEeccCCccccc
Confidence            5899999999999999999998765432     346999999999999999999999999999996 9999999999877


Q ss_pred             hhh
Q 025290           85 AAF   87 (255)
Q Consensus        85 ~~~   87 (255)
                      ++.
T Consensus       134 ~n~  136 (324)
T d1s95a_         134 MNQ  136 (324)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            754

>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: lambda ser/thr protein phosphatase
species: Bacteriophage lambda [TaxId: 10710]

Probab=99.87  E-value=4.3e-23  Score=174.00  Aligned_cols=76  Identities=22%  Similarity=0.373  Sum_probs=67.1

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      ..+||+||||||||+++|+++|+++++...     .|++|++||+|||||+|.+|++++++.       ++++|+||||.
T Consensus        11 ~~~rI~vIgDIHG~~~~L~~lL~~i~~~~~-----~d~lv~lGD~vDrGp~s~~vl~~l~~~-------~~~~i~GNHE~   78 (219)
T d1g5ba_          11 KYRNIWVVGDLHGCYTNLMNKLDTIGFDNK-----KDLLISVGDLVDRGAENVECLELITFP-------WFRAVRGNHEQ   78 (219)
T ss_dssp             GCSCEEEECCCTTCHHHHHHHHHHHTCCTT-----TCEEEECSCCSSSSSCHHHHHGGGGST-------TEEECCCHHHH
T ss_pred             CCCeEEEEEecccCHHHHHHHHHHcCCCCC-----CCEEEEeCCccccCccHHHHHHHhhcc-------ccccccCcHHH
Confidence            357999999999999999999999986532     589999999999999999999988653       58999999999


Q ss_pred             chhhhhcC
Q 025290           83 GFAAFVGV   90 (255)
Q Consensus        83 ~~~~~~~~   90 (255)
                      ++++++..
T Consensus        79 ~ll~~~~~   86 (219)
T d1g5ba_          79 MMIDGLSE   86 (219)
T ss_dssp             HHHHHHST
T ss_pred             HHHHHHhc
Confidence            99988764

>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Phosphoesterase-related
domain: Hypothetical protein PF1291
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=99.77  E-value=1.6e-19  Score=152.38  Aligned_cols=80  Identities=19%  Similarity=0.238  Sum_probs=66.3

Q ss_pred             eEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccchh
Q 025290            6 RVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGFA   85 (255)
Q Consensus         6 ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~~   85 (255)
                      +|++||||||++.+|+++|+.+.+.... ..+.|.+|++||++|+||.+.+++++++++..+.   ++++|+||||.+++
T Consensus         2 ~I~visDiHg~~~~l~~~l~~i~~~~~~-~~~~D~ii~~GDlvd~G~~~~evi~~l~~l~~~~---~v~~v~GNHD~~~~   77 (251)
T d1nnwa_           2 YVAVLANIAGNLPALTAALSRIEEMREE-GYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKE---NVKIIRGKYDQIIA   77 (251)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHHT-TCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHS---CEEEECCHHHHHHH
T ss_pred             EEEEEEccccCHHHHHHHHHHHHHhhcc-CCCCcEEEEecCcCCCCCCcHHHHHHHHHHhhcC---CEEEEeccHHHHHH
Confidence            7999999999999999999988654221 1134899999999999999999999999986542   58999999999887


Q ss_pred             hhhc
Q 025290           86 AFVG   89 (255)
Q Consensus        86 ~~~~   89 (255)
                      ....
T Consensus        78 ~~~~   81 (251)
T d1nnwa_          78 MSDP   81 (251)
T ss_dssp             HSCT
T ss_pred             hccc
Confidence            6543

>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: TT1561-like
domain: Hypothetical protein TT1561
species: Thermus thermophilus [TaxId: 274]

Probab=99.55  E-value=4.6e-15  Score=122.33  Aligned_cols=77  Identities=14%  Similarity=0.245  Sum_probs=65.3

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      +.++|+++|||||++.+|+++++.+....+      |.+|++||++++|+.+.++..++..++...  ..+++|+||||.
T Consensus         4 ~~~~i~~~sd~hg~~eale~~~~~~~~~~~------D~vv~~GDl~~~~~~~~~~~~~~~~L~~~~--~pv~~i~GNHD~   75 (228)
T d1uf3a_           4 TVRYILATSNPMGDLEALEKFVKLAPDTGA------DAIALIGNLMPKAAKSRDYAAFFRILSEAH--LPTAYVPGPQDA   75 (228)
T ss_dssp             CCCEEEEEECCTTCHHHHHHHHTHHHHHTC------SEEEEESCSSCTTCCHHHHHHHHHHHGGGC--SCEEEECCTTSC
T ss_pred             cccEEEEEeCCCCCHHHHHHHHHHHhhcCC------CEEEECCCCCCCCccchHHHHhhhhhcccc--ceEEEEecCCCc
Confidence            357899999999999999999998877643      999999999999999999888888776642  259999999998


Q ss_pred             chhhh
Q 025290           83 GFAAF   87 (255)
Q Consensus        83 ~~~~~   87 (255)
                      .....
T Consensus        76 ~~~~~   80 (228)
T d1uf3a_          76 PIWEY   80 (228)
T ss_dssp             SHHHH
T ss_pred             hhhhh
Confidence            76544

>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: YfcE-like
domain: Phosphodiesterase yfcE
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=5.1e-13  Score=108.15  Aligned_cols=75  Identities=19%  Similarity=0.340  Sum_probs=62.2

Q ss_pred             CCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--------HHHHHHHHhCCCCCCCCcEEE
Q 025290            4 PRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--------REVIDFLISLPTKYPNQKHVF   75 (255)
Q Consensus         4 ~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--------~~vl~~l~~l~~~~p~~~v~~   75 (255)
                      +|||.+||||||++.+|+++++.+....      .|.+|++||++++|+.+        .++++.+..+..     ++++
T Consensus         1 mMki~iiSDiHg~~~al~~vl~~~~~~~------~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~   69 (184)
T d1su1a_           1 MMKLMFASDIHGSLPATERVLELFAQSG------AQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAH-----KVIA   69 (184)
T ss_dssp             CCEEEEECCCTTBHHHHHHHHHHHHHHT------CSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGG-----GEEE
T ss_pred             CcEEEEEeecCCCHHHHHHHHHHHhhcC------CCEEEEcCcccccCccchhhhccCcHHHHHHHHhcCC-----cEEE
Confidence            5899999999999999999999887653      38999999999998743        567777777654     5899


Q ss_pred             ECCCcccchhhhhc
Q 025290           76 LSGNHDLGFAAFVG   89 (255)
Q Consensus        76 i~GNHE~~~~~~~~   89 (255)
                      |+||||........
T Consensus        70 v~GNhD~~~~~~~~   83 (184)
T d1su1a_          70 VRGNCDSEVDQMLL   83 (184)
T ss_dssp             CCCTTCCHHHHHHS
T ss_pred             ecCCCCchhhhhhh
Confidence            99999988776543

>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: YfcE-like
domain: Putative phosphodiesterase MJ0936
species: Methanococcus jannaschii [TaxId: 2190]

Probab=99.17  E-value=3.4e-11  Score=96.38  Aligned_cols=66  Identities=17%  Similarity=0.225  Sum_probs=54.4

Q ss_pred             CeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcccch
Q 025290            5 RRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      |||.+||||||++.+|+++++.+....      .|.++++||+++.     ++++.+..+..     ++++++||||...
T Consensus         1 MkI~iiSDiHgn~~al~~vl~~~~~~~------~D~ii~~GD~~~~-----~~~~~l~~~~~-----~~~~v~GN~D~~~   64 (165)
T d1s3la_           1 MKIGIMSDTHDHLPNIRKAIEIFNDEN------VETVIHCGDFVSL-----FVIKEFENLNA-----NIIATYGNNDGER   64 (165)
T ss_dssp             CEEEEECCCTTCHHHHHHHHHHHHHSC------CSEEEECSCCCST-----HHHHHGGGCSS-----EEEEECCTTCCCH
T ss_pred             CEEEEEEeCCCCHHHHHHHHHHHHhcC------CCEEEECCCccCH-----HHHHHHhhcCc-----cEEEEcccccccc
Confidence            799999999999999999999887654      3999999999964     45666666553     5999999999765


Q ss_pred             hh
Q 025290           85 AA   86 (255)
Q Consensus        85 ~~   86 (255)
                      ..
T Consensus        65 ~~   66 (165)
T d1s3la_          65 CK   66 (165)
T ss_dssp             HH
T ss_pred             hh
Confidence            54

>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: TT1561-like
domain: Uncharacterized protein Aq 1956
species: Aquifex aeolicus [TaxId: 63363]

Probab=99.09  E-value=5.3e-11  Score=98.74  Aligned_cols=47  Identities=17%  Similarity=0.270  Sum_probs=40.6

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChH
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTR   55 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~   55 (255)
                      ++.||++|||||++++.|.++++.+....+      |.+|++||++|.+..+.
T Consensus         1 ~~~ri~~isD~h~~~~~l~~l~~~~~~~~~------D~vli~GDl~~~~~~~~   47 (257)
T d2yvta1           1 MPRKVLAIKNFKERFDLLPKLKGVIAEKQP------DILVVVGNILKNEALEK   47 (257)
T ss_dssp             CCCEEEEEECCTTCGGGHHHHHHHHHHHCC------SEEEEESCCCCCHHHHH
T ss_pred             CCcEEEEEeCCCCCHHHHHHHHHHHhhcCC------CEEEEecccCCCCCCCH
Confidence            468999999999999999999998887654      99999999999875443

>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: YfcE-like
domain: Vacuolar protein sorting 29, VPS29
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.82  E-value=1.1e-09  Score=89.41  Aligned_cols=63  Identities=24%  Similarity=0.297  Sum_probs=47.0

Q ss_pred             CeEEEEccCCCCHHHH--HH-HHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290            5 RRVCCIGDVHGYISKL--QN-LWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         5 ~ri~vigDIHG~~~~l--~~-lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      |||.||||+||+..++  .+ +.+.+...      ..|.+|++||+++     .++++++.++..     ++++|+||||
T Consensus         1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~------~~D~Ii~~GDi~~-----~e~l~~l~~~~~-----~v~~V~GN~D   64 (182)
T d1z2wa1           1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPG------KIQHILCTGNLCT-----KESYDYLKTLAG-----DVHIVRGDFD   64 (182)
T ss_dssp             CEEEEECCCCBTTTCSSCCHHHHTTCCTT------SCSEEEECSCCBS-----HHHHHHHHHHCS-----EEEECCCTTC
T ss_pred             CEEEEEeecCCCCcchhhHHHHHHHhccc------CCCEEEEccCccc-----hhhHHHHHhhCC-----ceEEEeCCcC
Confidence            7999999999976443  23 33333221      2489999999984     689999988764     5899999999


Q ss_pred             cc
Q 025290           82 LG   83 (255)
Q Consensus        82 ~~   83 (255)
                      ..
T Consensus        65 ~~   66 (182)
T d1z2wa1          65 EN   66 (182)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: YfcE-like
domain: Uncharacterized protein SP1879
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.76  E-value=8.2e-09  Score=83.26  Aligned_cols=60  Identities=15%  Similarity=0.155  Sum_probs=47.4

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      ..+||.||||+||+..+|+++++....+       .|.++++||++..+....        +      ..+++|+||||.
T Consensus         2 ~~~kI~viSD~Hgn~~al~~vl~~~~~~-------~D~iih~GD~~~~~~~~~--------~------~~~~~V~GN~D~   60 (173)
T d3ck2a1           2 AKQTIIVMSDSHGDSLIVEEVRDRYVGK-------VDAVFHNGDSELRPDSPL--------W------EGIRVVKGNMDF   60 (173)
T ss_dssp             CCEEEEEECCCTTCHHHHHHHHHHHTTT-------SSEEEECSCCCSCTTCGG--------G------TTEEECCCTTCC
T ss_pred             CCCEEEEEeccCCCHHHHHHHHHHhhcC-------CCEEEECCcccCcccchh--------h------cCCeEEecCccc
Confidence            3579999999999999999999876332       489999999987655331        1      158999999996


Q ss_pred             c
Q 025290           83 G   83 (255)
Q Consensus        83 ~   83 (255)
                      .
T Consensus        61 ~   61 (173)
T d3ck2a1          61 Y   61 (173)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: YfcE-like
domain: Vacuolar protein sorting 29, VPS29
species: Cryptosporidium parvum [TaxId: 5807]

Probab=98.61  E-value=7e-09  Score=85.03  Aligned_cols=64  Identities=22%  Similarity=0.348  Sum_probs=45.2

Q ss_pred             eEEEEccCCCCHHHHH---HHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCCcEEEECCCccc
Q 025290            6 RVCCIGDVHGYISKLQ---NLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus         6 ri~vigDIHG~~~~l~---~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      -|.|||||||+..++.   ++.+.+...      ..|.+|++||+++     .+++++++++..     ++++|+||||.
T Consensus         5 lIlviSD~H~~~~~~~l~~~~~~~~~~~------~vD~ii~~GDi~~-----~~~l~~l~~l~~-----~v~~V~GN~D~   68 (193)
T d2a22a1           5 LVLLIGDLKIPYGAKELPSNFRELLATD------KINYVLCTGNVCS-----QEYVEMLKNITK-----NVYIVSGDLDS   68 (193)
T ss_dssp             EEEEECCCCTTTTCSSCCGGGHHHHHCT------TCCEEEECSCCCC-----HHHHHHHHHHCS-----CEEECCCTTCC
T ss_pred             EEEEEeCCCCCcccchhhHHHHHHhccC------CCCEEEECCCCCC-----HHHHHHHHhhCC-----CEEEEcCCCCc
Confidence            4899999998644321   222222221      2389999999986     489999988763     58999999997


Q ss_pred             chh
Q 025290           83 GFA   85 (255)
Q Consensus        83 ~~~   85 (255)
                      ...
T Consensus        69 ~~~   71 (193)
T d2a22a1          69 AIF   71 (193)
T ss_dssp             SCC
T ss_pred             chh
Confidence            544

>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: DNA double-strand break repair nuclease
domain: Mre11
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.60  E-value=2.7e-08  Score=85.23  Aligned_cols=71  Identities=18%  Similarity=0.271  Sum_probs=48.4

Q ss_pred             CeEEEEccCC-CC------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHH----HHhCCCC
Q 025290            5 RRVCCIGDVH-GY------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDF----LISLPTK   67 (255)
Q Consensus         5 ~ri~vigDIH-G~------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~----l~~l~~~   67 (255)
                      ||++.+||+| |.            ...|+++++.+....      .|.+|++||++|++.-+.+.+..    +..+...
T Consensus         1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~------~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~   74 (333)
T d1ii7a_           1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQEN------VDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEH   74 (333)
T ss_dssp             CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTT------CSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcC------CCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhc
Confidence            7999999999 31            345666776665543      38999999999987544443333    3333322


Q ss_pred             CCCCcEEEECCCcccc
Q 025290           68 YPNQKHVFLSGNHDLG   83 (255)
Q Consensus        68 ~p~~~v~~i~GNHE~~   83 (255)
                        +..+++|.||||..
T Consensus        75 --~i~v~~i~GNHD~~   88 (333)
T d1ii7a_          75 --SIPVFAIEGNHDRT   88 (333)
T ss_dssp             --TCCEEEECCTTTCC
T ss_pred             --CCcEEEeCCCCccc
Confidence              23599999999963

>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: GpdQ-like
domain: Glycerophosphodiesterase GpdQ
species: Enterobacter aerogenes [TaxId: 548]

Probab=98.47  E-value=1.6e-07  Score=79.77  Aligned_cols=70  Identities=21%  Similarity=0.287  Sum_probs=48.7

Q ss_pred             CeEEEEccCC---------CC---HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--HHHHHHHHhCCCCCCC
Q 025290            5 RRVCCIGDVH---------GY---ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--REVIDFLISLPTKYPN   70 (255)
Q Consensus         5 ~ri~vigDIH---------G~---~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--~~vl~~l~~l~~~~p~   70 (255)
                      |+|+.|||+|         |.   ...++++++.+.....    ..|.+|++||++|.|...  ..+.+++.++..    
T Consensus         1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~----~~D~vv~~GDl~~~~~~~~y~~~~~~l~~l~~----   72 (271)
T d3d03a1           1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRE----RPDAVVVSGDIVNCGRPEEYQVARQILGSLNY----   72 (271)
T ss_dssp             CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSS----CCSEEEEESCCBSSCCHHHHHHHHHHHTTCSS----
T ss_pred             CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCC----CCCEEEECcccCcCCcchhHHHHHHHHhccCC----
Confidence            7999999999         21   2457778877754322    248999999999987532  223444544432    


Q ss_pred             CcEEEECCCcccc
Q 025290           71 QKHVFLSGNHDLG   83 (255)
Q Consensus        71 ~~v~~i~GNHE~~   83 (255)
                       .+++|+||||..
T Consensus        73 -p~~~i~GNHD~~   84 (271)
T d3d03a1          73 -PLYLIPGNHDDK   84 (271)
T ss_dssp             -CEEEECCTTSCH
T ss_pred             -CEEEEecCccch
Confidence             589999999953

>d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Hypothetical protein aq 1666
domain: Hypothetical protein aq 1666
species: Aquifex aeolicus [TaxId: 63363]

Probab=98.46  E-value=1.6e-07  Score=76.51  Aligned_cols=72  Identities=21%  Similarity=0.277  Sum_probs=50.6

Q ss_pred             CeEEEEccCC-CCHHH-----------H-HHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCChHHHHHHHHhCCCCCCCC
Q 025290            5 RRVCCIGDVH-GYISK-----------L-QNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNTREVIDFLISLPTKYPNQ   71 (255)
Q Consensus         5 ~ri~vigDIH-G~~~~-----------l-~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s~~vl~~l~~l~~~~p~~   71 (255)
                      .++++|||+| |....           . +.+++.++....    +.|.+++|||+..+.....+.++++.+|..     
T Consensus         2 ~mi~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~----~~D~v~~LGD~~~~~~~~~~~~~~l~~L~g-----   72 (188)
T d1xm7a_           2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLK----PEDTLYHLGDFTWHFNDKNEYLRIWKALPG-----   72 (188)
T ss_dssp             CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCC----TTCEEEECSCCBSCSCCTTSHHHHHHHSSS-----
T ss_pred             CeEEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcC----CCCEEEEeCCccccCCCHHHHHHHHHHCCC-----
Confidence            3688999999 32221           1 345566654333    469999999998755555667888888863     


Q ss_pred             cEEEECCCcccchh
Q 025290           72 KHVFLSGNHDLGFA   85 (255)
Q Consensus        72 ~v~~i~GNHE~~~~   85 (255)
                      +.++|+||||....
T Consensus        73 ~~~lI~GNHD~~~~   86 (188)
T d1xm7a_          73 RKILVMGNHDKDKE   86 (188)
T ss_dssp             EEEEECCTTCCCHH
T ss_pred             ceEEEecCCCchhh
Confidence            58999999997543

>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: GpdQ-like
domain: Rv0805 cyclic nucleotide phosphodiesterase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.38  E-value=1.3e-07  Score=79.30  Aligned_cols=76  Identities=24%  Similarity=0.354  Sum_probs=49.0

Q ss_pred             CCCCeEEEEccCCCC------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCCh--HHHHHHHHhCCCC
Q 025290            2 SRPRRVCCIGDVHGY------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPNT--REVIDFLISLPTK   67 (255)
Q Consensus         2 ~~~~ri~vigDIHG~------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~s--~~vl~~l~~l~~~   67 (255)
                      .+.|||+.|||+|=.            ...|+++++.+.....    ..|.+|++||+++.|...  ....+.+..+..+
T Consensus         2 ~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~----~pD~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~   77 (256)
T d2hy1a1           2 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGL----RPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQ   77 (256)
T ss_dssp             CCSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTC----CCSEEEECSCCBSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCC----CCCEEEECCCCCCCCChhHHHHHHHHhhhhhhh
Confidence            457899999999921            3457777777754322    248999999999988543  1223333322111


Q ss_pred             CCCCcEEEECCCccc
Q 025290           68 YPNQKHVFLSGNHDL   82 (255)
Q Consensus        68 ~p~~~v~~i~GNHE~   82 (255)
                      . +..+++++||||.
T Consensus        78 ~-~~p~~~v~GNHD~   91 (256)
T d2hy1a1          78 L-GAELVWVMGNHDD   91 (256)
T ss_dssp             H-TCEEEECCCTTSC
T ss_pred             c-CCCEEEEcccccc
Confidence            1 1259999999994

>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: ADPRibase-Mn-like
domain: Uncharacterized C17orf48 homolog zgc:64213
species: Zebrafish (Danio rerio) [TaxId: 7955]

Probab=97.94  E-value=4.6e-06  Score=69.24  Aligned_cols=74  Identities=16%  Similarity=0.122  Sum_probs=47.3

Q ss_pred             CCeEEEEccCCCC-------------------HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCC----ChHHHHHH
Q 025290            4 PRRVCCIGDVHGY-------------------ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGP----NTREVIDF   60 (255)
Q Consensus         4 ~~ri~vigDIHG~-------------------~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~----~s~~vl~~   60 (255)
                      ..|+.+|||+|=.                   ...+.++++.+....      .|.+|++||++|.+.    ...+.++.
T Consensus         3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~------~DfVv~~GDl~~~~~~~~~~~~~~~~~   76 (320)
T d2nxfa1           3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRER------VQCVVQLGDIIDGHNRRRDASDRALDT   76 (320)
T ss_dssp             SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTT------CSEEEECSCCBCTHHHHTTCHHHHHHH
T ss_pred             eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCC------CCEEEECCCCCCCCCcchhHHHHHHHH
Confidence            4689999999922                   345666677665543      389999999998752    23333333


Q ss_pred             HHhCCCCCCCCcEEEECCCcccch
Q 025290           61 LISLPTKYPNQKHVFLSGNHDLGF   84 (255)
Q Consensus        61 l~~l~~~~p~~~v~~i~GNHE~~~   84 (255)
                      +.+.....+ ..++.+.||||...
T Consensus        77 ~~~~~~~~~-~p~~~v~GNHD~~~   99 (320)
T d2nxfa1          77 VMAELDACS-VDVHHVWGNHEFYN   99 (320)
T ss_dssp             HHHHHHTTC-SEEEECCCHHHHHH
T ss_pred             HHHHHHHcC-CCEEEecccCcccc
Confidence            322211111 26999999999643

>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Purple acid phosphatase-like
domain: Mammalian purple acid phosphatase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.45  E-value=6.3e-05  Score=62.75  Aligned_cols=76  Identities=21%  Similarity=0.243  Sum_probs=42.9

Q ss_pred             CCCCeEEEEccCCCCH----------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcC-CCCCCh---HHHHHHHHhCCCC
Q 025290            2 SRPRRVCCIGDVHGYI----------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYC-DRGPNT---REVIDFLISLPTK   67 (255)
Q Consensus         2 ~~~~ri~vigDIHG~~----------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlv-DrG~~s---~~vl~~l~~l~~~   67 (255)
                      ++..|++||||+|+.-          ..+..+.+.+....      .|.+|++||+| +.|..+   .+...........
T Consensus         2 ~~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~   75 (302)
T d1utea_           2 TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLG------ADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSD   75 (302)
T ss_dssp             CCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHC------CSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCS
T ss_pred             CCCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCC------CCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhh
Confidence            4568999999998531          12233444444433      38999999998 334322   1222222221110


Q ss_pred             --CCCCcEEEECCCcccc
Q 025290           68 --YPNQKHVFLSGNHDLG   83 (255)
Q Consensus        68 --~p~~~v~~i~GNHE~~   83 (255)
                        ..+..++.++||||..
T Consensus        76 ~~~~~~P~~~~~GNHD~~   93 (302)
T d1utea_          76 PSLRNVPWHVLAGNHDHL   93 (302)
T ss_dssp             GGGTTCCEEECCCHHHHH
T ss_pred             hhhcCCceEEeecccccc
Confidence              1123589999999953

>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Purple acid phosphatase-like
domain: Plant purple acid phosphatase, catalytic domain
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=97.13  E-value=0.00037  Score=60.10  Aligned_cols=73  Identities=18%  Similarity=0.225  Sum_probs=46.4

Q ss_pred             CCCeEEEEccCCCCHHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCC-CCC---Ch---HHHHHHHHhCCCCCCCCcEEE
Q 025290            3 RPRRVCCIGDVHGYISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCD-RGP---NT---REVIDFLISLPTKYPNQKHVF   75 (255)
Q Consensus         3 ~~~ri~vigDIHG~~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvD-rG~---~s---~~vl~~l~~l~~~~p~~~v~~   75 (255)
                      .+.|++||||++........+........     ..+.++++||++. .|.   ..   .+-++.+..+....|   ++.
T Consensus         6 ~p~~F~v~GD~g~~~~~~~~~~~~~~~~~-----~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P---~~~   77 (312)
T d2qfra2           6 VPYTFGLIGDLGQSFDSNTTLSHYELSPK-----KGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQP---WIW   77 (312)
T ss_dssp             CCEEEEEECSCCSBHHHHHHHHHHHHCSS-----CCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSC---EEE
T ss_pred             CCEEEEEEeeCCCCCchHHHHHHHHHcCC-----CCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcce---EEE
Confidence            46799999999877766655544322221     2489999999973 121   11   134455555444444   889


Q ss_pred             ECCCcccc
Q 025290           76 LSGNHDLG   83 (255)
Q Consensus        76 i~GNHE~~   83 (255)
                      ++||||..
T Consensus        78 ~~GNHD~~   85 (312)
T d2qfra2          78 TAGNHEIE   85 (312)
T ss_dssp             CCCGGGTC
T ss_pred             eccccccc
Confidence            99999953

>d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
species: Thermus thermophilus [TaxId: 274]

Probab=96.24  E-value=0.0053  Score=52.27  Aligned_cols=67  Identities=15%  Similarity=0.224  Sum_probs=48.9

Q ss_pred             eEEEEccCCCCH-----------------HHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCC-----ChHHHHHHHHh
Q 025290            6 RVCCIGDVHGYI-----------------SKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGP-----NTREVIDFLIS   63 (255)
Q Consensus         6 ri~vigDIHG~~-----------------~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~-----~s~~vl~~l~~   63 (255)
                      .|+.++|+||.+                 ..+..++++++...+     ...++-.||++...+     ....+++.+..
T Consensus         4 ~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~-----~~l~ldaGD~~~Gs~~~~~~~g~~~~~~~n~   78 (302)
T d2z1aa2           4 TLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAK-----NPLFLDAGDVFQGTLYFNQYRGLADRYFMHR   78 (302)
T ss_dssp             EEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSS-----SEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred             EEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCC-----CeEEEEcCCCCCCCHhHhhhcchhHHHHHHh
Confidence            588999999864                 467778888765543     467888999997655     33567777777


Q ss_pred             CCCCCCCCcEEEECCCcccc
Q 025290           64 LPTKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        64 l~~~~p~~~v~~i~GNHE~~   83 (255)
                      +...      ....||||+.
T Consensus        79 ~gyD------a~~~GNHEfd   92 (302)
T d2z1aa2          79 LRYR------AMALGNHEFD   92 (302)
T ss_dssp             TTCC------EEECCGGGGT
T ss_pred             cccc------cccccchhhh
Confidence            7642      5789999963

>d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=95.06  E-value=0.012  Score=50.70  Aligned_cols=68  Identities=19%  Similarity=0.234  Sum_probs=42.6

Q ss_pred             CeEEEEccCCCCH----------HHHHHHHHHhhh----ccCCCCCCCcEEEEeCCcCCCCCC-----hHHHHHHHHhCC
Q 025290            5 RRVCCIGDVHGYI----------SKLQNLWKNLET----HIGPSDFNSAIIIFLGDYCDRGPN-----TREVIDFLISLP   65 (255)
Q Consensus         5 ~ri~vigDIHG~~----------~~l~~lL~~~~~----~~~~~~~~~d~li~lGDlvDrG~~-----s~~vl~~l~~l~   65 (255)
                      .+|+.++|+||++          ..+..+++.+..    ..+     +..++-.||++...+.     ...+++.+..+.
T Consensus         9 ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~-----~~l~ldaGD~~~gs~~s~~~~g~~~~~~mn~~g   83 (337)
T d1usha2           9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGG-----SVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG   83 (337)
T ss_dssp             EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTC-----EEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT
T ss_pred             EEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCC-----CEEEEECCCCcccCHHHHHhCChHHHHHHHhcC
Confidence            4689999999865          344445544432    221     2344448999975432     356777887776


Q ss_pred             CCCCCCcEEEECCCcccc
Q 025290           66 TKYPNQKHVFLSGNHDLG   83 (255)
Q Consensus        66 ~~~p~~~v~~i~GNHE~~   83 (255)
                      ..      ....||||+.
T Consensus        84 ~D------a~~~GNHEfd   95 (337)
T d1usha2          84 YD------AMAIGNHEFD   95 (337)
T ss_dssp             CC------EEECCGGGGS
T ss_pred             Ce------EEEechhhhc
Confidence            42      3567999963

>d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain
species: Candida albicans [TaxId: 5476]

Probab=94.89  E-value=0.0088  Score=51.35  Aligned_cols=68  Identities=19%  Similarity=0.282  Sum_probs=41.1

Q ss_pred             CeEEEEccCCCCHH-------------HHHHH---HHHhhhccCCCCCCCcEEEEeCCcCCCCCC-------hHHHHHHH
Q 025290            5 RRVCCIGDVHGYIS-------------KLQNL---WKNLETHIGPSDFNSAIIIFLGDYCDRGPN-------TREVIDFL   61 (255)
Q Consensus         5 ~ri~vigDIHG~~~-------------~l~~l---L~~~~~~~~~~~~~~d~li~lGDlvDrG~~-------s~~vl~~l   61 (255)
                      .+|+.+.|+||.+.             .+.++   +++......    +.-.++-.||+++..+.       ...+++++
T Consensus        12 l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~----~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~m   87 (322)
T d3c9fa2          12 INFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRN----QDLLLIDSGDRHDGNGLSDITSPNGLKSTPIF   87 (322)
T ss_dssp             EEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTT----CEEEEEECSCCCSSCHHHHSSSSTTTTTHHHH
T ss_pred             EEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcC----CCEEEEECCccCCCCchhhhcccCChHHHHHH
Confidence            47899999998542             23333   333221111    12355569999986432       34567777


Q ss_pred             HhCCCCCCCCcEEEECCCccc
Q 025290           62 ISLPTKYPNQKHVFLSGNHDL   82 (255)
Q Consensus        62 ~~l~~~~p~~~v~~i~GNHE~   82 (255)
                      ..+...      ..+.||||.
T Consensus        88 n~lgyD------a~t~GNHEf  102 (322)
T d3c9fa2          88 IKQDYD------LLTIGNHEL  102 (322)
T ss_dssp             TTSCCS------EECCCGGGS
T ss_pred             hccCCc------EEeecceec
Confidence            777642      467799996

>d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: DR1281-like
domain: Hypothetical protein MPN349
species: Mycoplasma pneumoniae [TaxId: 2104]

Probab=94.30  E-value=0.032  Score=47.05  Aligned_cols=70  Identities=20%  Similarity=0.315  Sum_probs=53.5

Q ss_pred             CCCCCeEEEEccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-hHHHHHHHHhCCCCCCCCcEEEEC
Q 025290            1 MSRPRRVCCIGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-TREVIDFLISLPTKYPNQKHVFLS   77 (255)
Q Consensus         1 ~~~~~ri~vigDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s~~vl~~l~~l~~~~p~~~v~~i~   77 (255)
                      |.+.|||++||||=|.  ..++++.|..+..+..     -|.+|..|.-...|-. +.++.+.|.+...-      ++-.
T Consensus         1 m~~~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~-----iDfVIaNgENaa~G~Git~k~~~eL~~~GvD------vIT~   69 (281)
T d1t71a_           1 MMNSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQ-----ADLVIVNAENTTHGKGLSLKHYEFLKEAGVN------YITM   69 (281)
T ss_dssp             CCCCCEEEEECEEBHHHHHHHHHTTHHHHHHHHT-----CSEEEEECTBTTTTSSCCHHHHHHHHHHTCC------EEEC
T ss_pred             CCccceEEEEEccCCHHHHHHHHHHhHHHHHHhC-----CCEEEECCccCCCCcCCCHHHHHHHHHhCCc------EEEc
Confidence            7889999999999998  4566666766655433     4899999999876654 67788888887652      4579


Q ss_pred             CCcc
Q 025290           78 GNHD   81 (255)
Q Consensus        78 GNHE   81 (255)
                      |||=
T Consensus        70 GNH~   73 (281)
T d1t71a_          70 GNHT   73 (281)
T ss_dssp             CTTT
T ss_pred             Cchh
Confidence            9994

>d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: DR1281-like
domain: Putative phosphatase DR1281
species: Deinococcus radiodurans [TaxId: 1299]

Probab=91.95  E-value=0.22  Score=41.15  Aligned_cols=64  Identities=25%  Similarity=0.270  Sum_probs=49.5

Q ss_pred             CeEEEEccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-hHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290            5 RRVCCIGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-TREVIDFLISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         5 ~ri~vigDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s~~vl~~l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      |||++||||=|.  ...+++.|..++.+       -|.+|..|.-...|-. +.++.+.+.++..-      ++-.|||=
T Consensus         1 MkILfiGDIvG~~Gr~~v~~~Lp~lk~~-------~DfVIaNgENaa~G~Git~~~~~~l~~~GvD------viT~GNH~   67 (255)
T d1t70a_           1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQ-------FDFVIVNMENSAGGFGMHRDAARGALEAGAG------CLTLGNHA   67 (255)
T ss_dssp             CEEEEECCBBHHHHHHHHHHHHHHHGGG-------CSEEEEECTBTTTTSSCCHHHHHHHHHHTCS------EEECCTTT
T ss_pred             CeEEEEecCCCHHHHHHHHHHhHHHHhh-------CCEEEECCccCCCCcCCCHHHHHHHHHcCCc------EEEcCchh
Confidence            799999999998  46677888877653       3899999999876654 57778888777652      45799993

>d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: TTHA0625-like
domain: Hypothetical protein TTHA0625
species: Thermus thermophilus [TaxId: 274]

Probab=91.68  E-value=0.25  Score=40.72  Aligned_cols=64  Identities=23%  Similarity=0.325  Sum_probs=49.0

Q ss_pred             CeEEEEccCCCC--HHHHHHHHHHhhhccCCCCCCCcEEEEeCCcCCCCCC-hHHHHHHHHhCCCCCCCCcEEEECCCcc
Q 025290            5 RRVCCIGDVHGY--ISKLQNLWKNLETHIGPSDFNSAIIIFLGDYCDRGPN-TREVIDFLISLPTKYPNQKHVFLSGNHD   81 (255)
Q Consensus         5 ~ri~vigDIHG~--~~~l~~lL~~~~~~~~~~~~~~d~li~lGDlvDrG~~-s~~vl~~l~~l~~~~p~~~v~~i~GNHE   81 (255)
                      |||++||||=|.  ...+++.|..++.+       -|.+|..|.-...|-. +.++.+.|.+...-      ++-.|||=
T Consensus         1 MkiLfiGDIvG~~Gr~~v~~~Lp~Lk~~-------~DfVIaNgENaa~G~Git~k~~~~L~~~GVD------vIT~GNH~   67 (252)
T d2z06a1           1 MRVLFIGDVMAEPGLRAVGLHLPDIRDR-------YDLVIANGENAARGKGLDRRSYRLLREAGVD------LVSLGNHA   67 (252)
T ss_dssp             CEEEEECCBCHHHHHHHHHHHHHHHGGG-------CSEEEEECTTTTTTSSCCHHHHHHHHHHTCC------EEECCTTT
T ss_pred             CeEEEEeccCCHHHHHHHHHHhHHHHhh-------CCEEEEeeeccCCCcCCCHHHHHHHHHhCCC------EEEcCccc
Confidence            799999999998  46677777777643       3889999999876654 56778888887652      45799994