Citrus Sinensis ID: 025292

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
MCLCIDEELGIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLKVHDPVTFGGGRRHHGKRHHRSRSSGTKANDV
ccccccccEEEEEEEEEEEccccccccccEEEEEEEccccccccEEEEEEEEcccccccccEEEEcccccccccEEEEEEEcccEEEEEEccEEEEEEEccccccccccccccEEEEEEEccccccccccEEEEccccccEEEEEccEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHccccEEEEccccccccccccccccccHHHHHHcccccccEEcccccccccccccccccccccccc
cccccccccEEEEEEEEcccccccccccEEEEEEEEcccccccEEEEEEEEEcccccccccEEEEEEEcccccccEEEEEEcccEEEEEEccccEEEEEccHHccccccccccEEEEEEEccccccccccEEEEccccccEEEEEEcEEEccEEcccccccccccccccccccHHHHcccHHHHHHHHHHHHHcEEEEccccccccccccccccccHHHHHHHcccccEEEcccccccccccccccccccccccc
MCLCIDEELGIFTfglqmsngdmfeknhdeidfeflgnirgkdwriqtniygngstsigreerynlwfdpsddfhqysilwtdsqiifyidgipirefkrtasmggdfpakpmsLYATIwdgsdwatnggkyrvnykyapyvtefsdfvlhgcsfdpieqtsskcditesskvsiptgvspsqriKMENFRRKhmtysycydqirykvppfecvinpleaerlkvhdpvtfgggrrhhgkrhhrsrssgtkandv
MCLCIDEELGIFTFGLQMSNGDMFEKNHDEIDFEFLGnirgkdwriqtniygngstsigREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTsskcditesskvsiptgvspsqrikMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLKVHDPVtfgggrrhhgkrhhrsrssgtkandv
MCLCIDEELGIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLKVHDPVTFgggrrhhgkrhhrsrssgTKANDV
*CLCIDEELGIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIE*****************************NFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLKVHDPVTF************************
*CL**DEELGIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDIT************P*QRIKMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAE*L********************************
MCLCIDEELGIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLKVHDPVTFGG**********************
MCLCIDEELGIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIE************KVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLKVHDPVTFG***********************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MCLCIDEELGIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLKVHDPVTFGGGRRHHGKRHHRSRSSGTKANDV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query255 2.2.26 [Sep-21-2011]
Q38909332 Probable xyloglucan endot yes no 0.984 0.756 0.648 9e-97
Q8LDS2333 Probable xyloglucan endot no no 0.917 0.702 0.684 9e-95
Q38908343 Probable xyloglucan endot no no 0.831 0.618 0.593 1e-73
Q8L7H3357 Probable xyloglucan endot no no 0.901 0.644 0.510 5e-66
Q8LC45310 Probable xyloglucan endot no no 0.768 0.632 0.475 3e-51
Q9SV60292 Xyloglucan endotransgluco no no 0.8 0.698 0.431 3e-46
Q9SV61292 Putative xyloglucan endot no no 0.705 0.616 0.440 1e-42
Q9LJR7290 Xyloglucan endotransgluco no no 0.701 0.617 0.442 5e-42
P93046293 Probable xyloglucan endot no no 0.749 0.651 0.378 8e-38
Q9XIW1293 Probable xyloglucan endot no no 0.705 0.614 0.394 3e-37
>sp|Q38909|XTH28_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1 Back     alignment and function desciption
 Score =  353 bits (905), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 164/253 (64%), Positives = 198/253 (78%), Gaps = 2/253 (0%)

Query: 3   LCIDEELGIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREE 62
           L  D   G+      +SNGD++EKNHDEIDFEFLGNIRG++WRIQTNIYGNGST +GREE
Sbjct: 82  LPADYSAGV-VIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREE 140

Query: 63  RYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDG 122
           RYNLWFDP++DFHQYSILW+ S IIFY+D +PIRE KRTASMGGDFPAKPMSLY+TIWDG
Sbjct: 141 RYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPAKPMSLYSTIWDG 200

Query: 123 SDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPS 182
           S WAT+GGKY VNYKYAPYV++F+D +LHGC+ DP E+  S C       + + + ++ S
Sbjct: 201 SKWATDGGKYGVNYKYAPYVSQFTDLILHGCAVDPTEKFPS-CKDEAVQNLRLASEITES 259

Query: 183 QRIKMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLKVHDPVTFGGGRRHHGKRH 242
           QR KME FR+KHMTYSYCYD +RYKV   ECV+NP EA+RL+V+DPVTFGG    H +  
Sbjct: 260 QRNKMEIFRQKHMTYSYCYDHMRYKVVLSECVVNPAEAKRLRVYDPVTFGGIPHGHRRGK 319

Query: 243 HRSRSSGTKANDV 255
           HRSRS   +   +
Sbjct: 320 HRSRSRLARTESI 332
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|Q8LDS2|XTH27_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2 Back     alignment and function description
>sp|Q38908|XTH30_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2 Back     alignment and function description
>sp|Q8L7H3|XTH29_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1 Back     alignment and function description
>sp|Q8LC45|XTH33_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2 Back     alignment and function description
>sp|Q9SV60|XTH2_ARATH Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SV61|XTH1_ARATH Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=3 SV=2 Back     alignment and function description
>sp|Q9LJR7|XTH3_ARATH Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1 Back     alignment and function description
>sp|P93046|XTH31_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2 Back     alignment and function description
>sp|Q9XIW1|XTH5_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query255
255573236338 Xyloglucan endotransglucosylase/hydrolas 0.913 0.689 0.817 1e-107
449449082331 PREDICTED: probable xyloglucan endotrans 0.913 0.703 0.742 1e-107
449481291331 PREDICTED: probable xyloglucan endotrans 0.913 0.703 0.738 1e-106
449504255333 PREDICTED: probable xyloglucan endotrans 0.886 0.678 0.785 1e-106
449450129333 PREDICTED: probable xyloglucan endotrans 0.886 0.678 0.785 1e-106
224099595336 predicted protein [Populus trichocarpa] 0.913 0.693 0.838 1e-104
187373000336 xyloglucan endotransglucosylase/hydrolas 0.835 0.633 0.822 1e-104
124109193336 xyloglucan endotransglycosylase/hydrolas 0.913 0.693 0.834 1e-103
356512283338 PREDICTED: probable xyloglucan endotrans 0.839 0.633 0.795 1e-103
118482018336 unknown [Populus trichocarpa] 0.913 0.693 0.834 1e-103
>gi|255573236|ref|XP_002527547.1| Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis] gi|223533097|gb|EEF34856.1| Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/235 (81%), Positives = 210/235 (89%), Gaps = 2/235 (0%)

Query: 18  MSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQY 77
           MSNGD+FEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERY+LWFDPSDDFHQY
Sbjct: 103 MSNGDIFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYSLWFDPSDDFHQY 162

Query: 78  SILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYK 137
           SILWTDSQIIFY+D +PIRE KRT SMGGDFP+KPMSLYATIWDGSDWATNGGKYRVNY+
Sbjct: 163 SILWTDSQIIFYVDNVPIREVKRTVSMGGDFPSKPMSLYATIWDGSDWATNGGKYRVNYR 222

Query: 138 YAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTY 197
           YAPYVT+FSDFVLHGC+ DPIEQ  SKCD  +SS+ +IPTGV+P Q+IKMENFR K+MTY
Sbjct: 223 YAPYVTQFSDFVLHGCAVDPIEQI-SKCDAAQSSQ-AIPTGVTPLQKIKMENFRTKYMTY 280

Query: 198 SYCYDQIRYKVPPFECVINPLEAERLKVHDPVTFGGGRRHHGKRHHRSRSSGTKA 252
           SYCYD++RYK PP EC++NP EA RLK  DPVTFGG RRH GKR  RSRS    A
Sbjct: 281 SYCYDRVRYKNPPSECLVNPQEAARLKSFDPVTFGGARRHRGKRQRRSRSGHNDA 335

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449449082|ref|XP_004142294.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449481291|ref|XP_004156140.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449504255|ref|XP_004162296.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449450129|ref|XP_004142816.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224099595|ref|XP_002311545.1| predicted protein [Populus trichocarpa] gi|222851365|gb|EEE88912.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|187373000|gb|ACD03234.1| xyloglucan endotransglucosylase/hydrolase 10 [Malus x domestica] Back     alignment and taxonomy information
>gi|124109193|gb|ABM91072.1| xyloglucan endotransglycosylase/hydrolase precursor XTH-39 [Populus tremula] Back     alignment and taxonomy information
>gi|356512283|ref|XP_003524850.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28-like [Glycine max] Back     alignment and taxonomy information
>gi|118482018|gb|ABK92940.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query255
TAIR|locus:2006857332 XTH28 "xyloglucan endotransglu 0.878 0.674 0.685 1.8e-87
TAIR|locus:2059728333 EXGT-A3 "endoxyloglucan transf 0.835 0.639 0.710 8.9e-86
TAIR|locus:2031750343 XTH30 "xyloglucan endotransglu 0.796 0.591 0.604 3.8e-69
TAIR|locus:2117189357 XTH29 "xyloglucan endotransglu 0.843 0.602 0.523 2e-63
TAIR|locus:2194554310 XTH33 "xyloglucan:xyloglucosyl 0.768 0.632 0.480 1.2e-49
TAIR|locus:2123201292 XTH2 "xyloglucan endotransgluc 0.788 0.688 0.432 7.9e-46
TAIR|locus:2086959290 XTH3 "xyloglucan endotransgluc 0.701 0.617 0.442 3.2e-42
TAIR|locus:2123281292 XTH1 "xyloglucan endotransgluc 0.705 0.616 0.450 6.6e-42
TAIR|locus:2075919293 XTH31 "XYLOGLUCAN ENDOTRANSGLU 0.768 0.668 0.391 4.8e-39
TAIR|locus:2058006299 XTH32 "xyloglucan endotransglu 0.760 0.648 0.411 4.3e-38
TAIR|locus:2006857 XTH28 "xyloglucan endotransglucosylase/hydrolase 28" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 155/226 (68%), Positives = 186/226 (82%)

Query:     6 DEELGIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYN 65
             D   G+      +SNGD++EKNHDEIDFEFLGNIRG++WRIQTNIYGNGST +GREERYN
Sbjct:    85 DYSAGV-VIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYN 143

Query:    66 LWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDW 125
             LWFDP++DFHQYSILW+ S IIFY+D +PIRE KRTASMGGDFPAKPMSLY+TIWDGS W
Sbjct:   144 LWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPAKPMSLYSTIWDGSKW 203

Query:   126 ATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRI 185
             AT+GGKY VNYKYAPYV++F+D +LHGC+ DP E+  S C       + + + ++ SQR 
Sbjct:   204 ATDGGKYGVNYKYAPYVSQFTDLILHGCAVDPTEKFPS-CKDEAVQNLRLASEITESQRN 262

Query:   186 KMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLKVHDPVTF 231
             KME FR+KHMTYSYCYD +RYKV   ECV+NP EA+RL+V+DPVTF
Sbjct:   263 KMEIFRQKHMTYSYCYDHMRYKVVLSECVVNPAEAKRLRVYDPVTF 308
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA;ISS
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
GO:0010154 "fruit development" evidence=IMP
GO:0080086 "stamen filament development" evidence=IMP
TAIR|locus:2059728 EXGT-A3 "endoxyloglucan transferase A3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031750 XTH30 "xyloglucan endotransglucosylase/hydrolase 30" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117189 XTH29 "xyloglucan endotransglucosylase/hydrolase 29" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194554 XTH33 "xyloglucan:xyloglucosyl transferase 33" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2123201 XTH2 "xyloglucan endotransglucosylase/hydrolase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086959 XTH3 "xyloglucan endotransglucosylase/hydrolase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2123281 XTH1 "xyloglucan endotransglucosylase/hydrolase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075919 XTH31 "XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2058006 XTH32 "xyloglucan endotransglucosylase/hydrolase 32" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q38909XTH28_ARATH2, ., 4, ., 1, ., 2, 0, 70.64820.98430.7560yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query255
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-104
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 3e-50
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 2e-47
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 9e-21
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 2e-19
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 1e-17
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 3e-11
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 2e-09
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 1e-07
cd02178258 cd02178, GH16_beta_agarase, Beta-agarase, member o 2e-05
cd02177269 cd02177, GH16_kappa_carrageenase, Kappa-carrageena 0.002
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  303 bits (779), Expect = e-104
 Identities = 95/197 (48%), Positives = 129/197 (65%), Gaps = 5/197 (2%)

Query: 18  MSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQY 77
           +S+      NHDEIDFEFLGN+ G+ + +QTN++ NG    GRE+R  LWFDP+ DFH Y
Sbjct: 71  LSSQG--PDNHDEIDFEFLGNVTGQPYTLQTNVFANGVG--GREQRIYLWFDPTADFHTY 126

Query: 78  SILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWATNGGKYRVNY 136
           SILW   QI+FY+D +PIR FK   ++G  +P+ +PM +YA+IWDGSDWAT GG+ ++++
Sbjct: 127 SILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQGGRVKIDW 186

Query: 137 KYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMT 196
            YAP+V  + DF L GC  DP +  SS     +    S    +S +Q+  ME  RR +M 
Sbjct: 187 SYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAMEWVRRNYMV 246

Query: 197 YSYCYDQIRYKVPPFEC 213
           Y YC D+ RY VPP EC
Sbjct: 247 YDYCDDRKRYPVPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185687 cd02178, GH16_beta_agarase, Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185686 cd02177, GH16_kappa_carrageenase, Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 255
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 99.98
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 99.96
cd08023235 GH16_laminarinase_like Laminarinase, member of the 99.96
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 99.95
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 99.95
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.94
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.93
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.93
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.91
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.89
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.84
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.79
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 98.99
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 98.98
PF10287235 DUF2401: Putative TOS1-like glycosyl hydrolase (DU 91.53
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 91.35
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 90.15
smart00560133 LamGL LamG-like jellyroll fold domain. 89.82
smart00159206 PTX Pentraxin / C-reactive protein / pentaxin fami 86.13
>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
Probab=100.00  E-value=3e-69  Score=488.00  Aligned_cols=205  Identities=47%  Similarity=0.926  Sum_probs=187.2

Q ss_pred             CceeecCC--CCceEEEEEeecCCCCCCCCCceEEEEeCCCCCCCcEEEEeEEcCCcccCCcceeeecCCCCCCCcEEEE
Q 025292            1 MCLCIDEE--LGIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYS   78 (255)
Q Consensus         1 ~~~~~~~G--~G~~v~AFwl~s~~~~~~~~dEIDiE~lG~~~g~p~~vqTNv~~~G~~~~~r~~~~~l~fDps~dFH~Y~   78 (255)
                      ||+|+|+|  +|+ ||||||++++  |+.+|||||||||+++|+|+++|||+|.+|.+  ++++++.++|||+++||+|+
T Consensus        53 ~riKlp~g~s~G~-~pAFwl~~~~--wp~~~EID~E~lGn~~g~~~~~qtnv~~~g~g--~r~~~~~l~fdpt~dFHtY~  127 (263)
T cd02176          53 MRIKLPPGDSAGT-VTAFYLSSQG--PDNHDEIDFEFLGNVTGQPYTLQTNVFANGVG--GREQRIYLWFDPTADFHTYS  127 (263)
T ss_pred             EEEEeCCCCCCCe-EEEEEECCCC--CCCCCeEEEEEecccCCCceEEEEEEeCCCCC--CCceeeecCCCCCCCeEEEE
Confidence            58999997  896 9999999986  78999999999999999999999999998874  58889999999999999999


Q ss_pred             EEEcCCeEEEEECCEEEEEEeecCCCCCCCC-CCceeEEEEeecCCCCcCCCCccccCCCcccEEEEEeEEEEeeeccCC
Q 025292           79 ILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDP  157 (255)
Q Consensus        79 IdWtp~~I~fyVDG~~vr~~~~~~~~g~~~P-~~Pm~l~lnlW~gg~Wat~GG~~~id~s~aPf~a~~~~v~v~~c~~~~  157 (255)
                      |+|+|++|+|||||++||++++.+..|.+|| ++||+|++|||+||+|||+||++++||+++||+|.|++|+|.+|.+++
T Consensus       128 i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm~l~~niW~g~~WAt~gG~~~~d~~~aPf~a~~~~~~~~~c~~~~  207 (263)
T cd02176         128 ILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQGGRVKIDWSYAPFVASYRDFKLDGCVVDP  207 (263)
T ss_pred             EEEccceEEEEECCEEEEEEecccccCCCCCccceEEEEEeeEcCCCcccCCCcccccCCCCCeeEEEeeEEEeeeecCC
Confidence            9999999999999999999999877788999 599999999999999999999999999999999999999999999865


Q ss_pred             CCCCCCCCCC---cccCCCCCCCCCCHHHHHHHHHHhhcCeEEcccccCCCCCCCCCcc
Q 025292          158 IEQTSSKCDI---TESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC  213 (255)
Q Consensus       158 ~~~~~~~C~~---~~w~~~~~~~~l~~~q~~~~~~vr~~~m~YdYC~D~~R~p~~p~EC  213 (255)
                      ..   ..|..   ..|+..+.+++|+.+|+++|+|||+||||||||+|++|||.+||||
T Consensus       208 ~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~yC~d~~r~~~~p~ec  263 (263)
T cd02176         208 GD---SFSSCSCTEDWWNGSTYQQLSANQQRAMEWVRRNYMVYDYCDDRKRYPVPPPEC  263 (263)
T ss_pred             CC---ccccCCCccccccccccccCCHHHHHHHHHHHHCCEEEecCCCCCcCCCCcCCC
Confidence            32   23432   2244357789999999999999999999999999999999999999

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling.
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>PF10287 DUF2401: Putative TOS1-like glycosyl hydrolase (DUF2401); InterPro: IPR018805 This entry represents a family of proteins conserved primarily in fungi Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query255
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 6e-40
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 1e-39
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 1e-38
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 2e-38
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 2e-32
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 3e-08
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 5e-08
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 6e-08
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 7e-08
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 7e-08
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 9e-08
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 1e-07
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 2e-07
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 4e-07
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 9e-07
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 7e-06
1ajo_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 4e-04
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure 
Iteration: 1

 Score =  160 bits (405), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 118/199 (59%), Gaps = 12/199 (6%)
Query: 18  MSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTS---IGREERYNLWFDPSDDF 74
           +SN   +   HDEID EFLG I GK + +QTN++  GS     IGRE R +LWFDP+ D+
Sbjct: 82  LSNNQDYPGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDYNIIGRELRIHLWFDPTQDY 141
Query: 75  HQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRV 134
           H Y+I WT S+IIF++D +PIR + R +     FP +PM +Y ++WD S WAT  GKY+ 
Sbjct: 142 HNYAIYWTPSEIIFFVDDVPIRRYPRKSD--ATFPLRPMWVYGSVWDASSWATENGKYKA 199
Query: 135 NYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKH 194
           +Y+Y P+V ++ DF L  C+     + +S C+    + VS    +S  Q   ME  ++ +
Sbjct: 200 DYRYQPFVGKYEDFKLGSCTV----EAASSCN---PASVSPYGQLSQQQVAAMEWVQKNY 252
Query: 195 MTYSYCYDQIRYKVPPFEC 213
           M Y+YC D  R      EC
Sbjct: 253 MVYNYCDDPTRDHTLTPEC 271
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure
>pdb|1AJO|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-127 Length = 214 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query255
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 3e-65
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 5e-64
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 4e-46
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 2e-44
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 8e-44
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 5e-43
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 9e-41
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 9e-36
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 2e-27
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 3e-21
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 3e-07
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 2e-09
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 4e-09
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 8e-09
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 2e-08
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 6e-08
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 7e-08
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 9e-08
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 9e-08
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 9e-08
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 1e-07
3rq0_A269 Glycosyl hydrolases family protein 16; structural 1e-07
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 3e-06
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 5e-05
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  203 bits (518), Expect = 3e-65
 Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 8/208 (3%)

Query: 10  GIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFD 69
           G  T     S        HDEIDFEFLGN  G+ + +QTN++  G     RE+R  LWFD
Sbjct: 75  GTVTAFYLSSQNS----EHDEIDFEFLGNRTGQPYILQTNVFTGGKG--DREQRIYLWFD 128

Query: 70  PSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAK-PMSLYATIWDGSDWATN 128
           P+ +FH YS+LW    I+F +D +PIR FK    +G  FP   PM +Y+++W+  DWAT 
Sbjct: 129 PTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATR 188

Query: 129 GGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKME 188
           GG  + ++  AP++  +  F + GC     E                   +   Q  ++ 
Sbjct: 189 GGLEKTDWSKAPFIASYRSFHIDGCEASV-EAKFCATQGARWWDQKEFQDLDAFQYRRLS 247

Query: 189 NFRRKHMTYSYCYDQIRYKVPPFECVIN 216
             R+K+  Y+YC D+ RY   P EC  +
Sbjct: 248 WVRQKYTIYNYCTDRSRYPSMPPECKRD 275
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Length = 288 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Length = 269 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Length = 363 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query255
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 100.0
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 100.0
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 100.0
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 100.0
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 100.0
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 100.0
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 100.0
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 99.98
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 99.97
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 99.97
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 99.97
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 99.97
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 99.96
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 99.96
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 99.96
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 99.96
3rq0_A269 Glycosyl hydrolases family protein 16; structural 99.96
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 99.95
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 99.95
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 99.95
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.85
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.84
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.84
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 92.49
4dqa_A355 Uncharacterized protein; two domains structure, DU 82.95
3kqr_A204 Serum amyloid P-component; glycoprotein, disulfide 81.26
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
Probab=100.00  E-value=3.5e-64  Score=456.38  Aligned_cols=203  Identities=39%  Similarity=0.828  Sum_probs=183.0

Q ss_pred             CceeecCC--CCceEEEEEeecCCCCCCCCCceEEEEeCCCCCCCcEEEEeEEcCCcccC---CcceeeecCCCCCCCcE
Q 025292            1 MCLCIDEE--LGIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSI---GREERYNLWFDPSDDFH   75 (255)
Q Consensus         1 ~~~~~~~G--~G~~v~AFwl~s~~~~~~~~dEIDiE~lG~~~g~p~~vqTNv~~~G~~~~---~r~~~~~l~fDps~dFH   75 (255)
                      ||+|+|+|  +|+ ||||||++++.+++.+||||||+||+++++++++|||+|.+|.+..   ++++++.+++|++++||
T Consensus        67 ar~Klp~g~~~G~-wpAfwl~~~~~~~~~~gEIDIE~lG~~~~~~~~v~tn~~~~g~~~~~~~~~~~~~~l~~d~~~~FH  145 (274)
T 2uwa_A           67 ANIKLQSGYTAGV-ITSFYLSNNQDYPGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDYNIIGREMRIHLWFDPTQDYH  145 (274)
T ss_dssp             EEEECCCSCCTTE-EEEEEEECTTTSTTSCCEEEEEEECCCTTSCCEEEEEEECTTTTTSSCCCCCEEECCSSCTTSSCE
T ss_pred             EEEEeCCCCCCcE-EEEEEeCCCCCCCCcCCeEEEEEeCCCCCCceEEEEEEeCCCCCCccccCcceEEeCCCCCCCCcE
Confidence            58999999  996 9999999976555799999999999998889999999999886532   47888999999999999


Q ss_pred             EEEEEEcCCeEEEEECCEEEEEEeecCCCCCCCCCCceeEEEEeecCCCCcCCCCccccCCCcccEEEEEeEEEEeeecc
Q 025292           76 QYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSF  155 (255)
Q Consensus        76 ~Y~IdWtp~~I~fyVDG~~vr~~~~~~~~g~~~P~~Pm~l~lnlW~gg~Wat~GG~~~id~s~aPf~a~~~~v~v~~c~~  155 (255)
                      +|+|+|+|++|+|||||++|+++++.+  +..||++||+|+||||+||+||+.||.+++||+.+||+|.|++|+|++|..
T Consensus       146 tY~ieWtp~~I~fyVDG~~v~t~~~~~--~~~~P~~P~~l~lnlw~Gg~Wa~~gG~~~~d~~~~P~~~~v~~v~v~~c~~  223 (274)
T 2uwa_A          146 NYAIYWTPSEIIFFVDDVPIRRYPRKS--DATFPLRPLWVYGSVWDASSWATENGKYKADYRYQPFVGKYEDFKLGSCTV  223 (274)
T ss_dssp             EEEEEECSSEEEEEETTEEEEEEECCC--GGGSCCSCEEEEEEEEECTTTTBGGGTBCCCGGGCCEEEEEEEEEEEEEET
T ss_pred             EEEEEEecCeEEEEECCeEEEEEECCc--CCCCCCCCEEEEEEEEeCCCCccCCCcccccCCCCCEEEEEEEEEEEeccC
Confidence            999999999999999999999998865  568999999999999999999999999899999999999999999999987


Q ss_pred             CCCCCCCCCCCCcccCCCCCCCCCCHHHHHHHHHHhhcCeEEcccccCCCCCCCCCcc
Q 025292          156 DPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC  213 (255)
Q Consensus       156 ~~~~~~~~~C~~~~w~~~~~~~~l~~~q~~~~~~vr~~~m~YdYC~D~~R~p~~p~EC  213 (255)
                      +..    ..|....-   ..++.|+..|+++|+|||+||||||||+|++|||++||||
T Consensus       224 ~~~----~~c~~~~~---~~~~~l~~~~~~~~~~~~~~~~~y~yc~d~~r~~~~~~ec  274 (274)
T 2uwa_A          224 EAA----SSCNPASV---SPYGQLSQQQVAAMEWVQKNYMVYNYCDDPTRDHTLTPEC  274 (274)
T ss_dssp             TSC----TTCCCCCS---SSSSSCCHHHHHHHHHHHHHHEEEEGGGCTTSCGGGCTTC
T ss_pred             CCc----ccccccCc---CccccCCHHHHHHHHHHHhCCEEcccCCCCCcCCCCCCCC
Confidence            642    35875421   2357899999999999999999999999999999999999
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Back     alignment and structure
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 255
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 2e-62
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 4e-34
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 3e-13
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 8e-11
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 7e-08
d1upsa1266 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing 6e-06
d1o4ya_270 b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivo 7e-06
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  194 bits (495), Expect = 2e-62
 Identities = 70/209 (33%), Positives = 104/209 (49%), Gaps = 8/209 (3%)

Query: 9   LGIFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWF 68
            G  T     S        HDEIDFEFLGN  G+ + +QTN++  G     RE+R  LWF
Sbjct: 63  AGTVTAFYLSSQNS----EHDEIDFEFLGNRTGQPYILQTNVFTGGKG--DREQRIYLWF 116

Query: 69  DPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGG-DFPAKPMSLYATIWDGSDWAT 127
           DP+ +FH YS+LW    I+F +D +PIR FK    +G      +PM +Y+++W+  DWAT
Sbjct: 117 DPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWAT 176

Query: 128 NGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKM 187
            GG  + ++  AP++  +  F + GC     E                   +   Q  ++
Sbjct: 177 RGGLEKTDWSKAPFIASYRSFHIDGCEASV-EAKFCATQGARWWDQKEFQDLDAFQYRRL 235

Query: 188 ENFRRKHMTYSYCYDQIRYKVPPFECVIN 216
              R+K+  Y+YC D+ RY   P EC  +
Sbjct: 236 SWVRQKYTIYNYCTDRSRYPSMPPECKRD 264
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Length = 266 Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Length = 270 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query255
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 99.97
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 99.95
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.94
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.92
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.91
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.9
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 90.73
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 89.39
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 89.14
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 88.98
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 88.79
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 88.7
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 87.91
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 86.32
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 84.93
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=3e-66  Score=466.46  Aligned_cols=209  Identities=34%  Similarity=0.682  Sum_probs=187.9

Q ss_pred             CceeecCCCC-ceEEEEEeecCCCCCCCCCceEEEEeCCCCCCCcEEEEeEEcCCcccCCcceeeecCCCCCCCcEEEEE
Q 025292            1 MCLCIDEELG-IFTFGLQMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSI   79 (255)
Q Consensus         1 ~~~~~~~G~G-~~v~AFwl~s~~~~~~~~dEIDiE~lG~~~g~p~~vqTNv~~~G~~~~~r~~~~~l~fDps~dFH~Y~I   79 (255)
                      ||+|+|+|+| .++++|||+++   ++.++|||||+||++.++++++|||+|.+|.+  ++++++.++|||+++||+|+|
T Consensus        53 ariKlp~G~g~g~~~~f~~~s~---~~~~dEIDiE~lG~~~~~~~~v~tn~~~~g~g--~~~~~~~~~~d~s~dFHtY~i  127 (267)
T d1umza_          53 MQMKLVPGDSAGTVTAFYLSSQ---NSEHDEIDFEFLGNRTGQPYILQTNVFTGGKG--DREQRIYLWFDPTKEFHYYSV  127 (267)
T ss_dssp             EEEECCCSCCTTEEEEEEEECS---SSSCCEEEEEEECCSTTSCCEEEEEEEBTTBC--CCCEEECCSSCTTTSCEEEEE
T ss_pred             EEEEcCCCCccEEEEEeeecCC---CCCCCeEEEEEecccCCcccEEEeeEeCCCCC--CcceeEecCCCCccCcEEEEE
Confidence            6899999873 13778888776   47899999999999999999999999999884  688999999999999999999


Q ss_pred             EEcCCeEEEEECCEEEEEEeecCCCCCCCC-CCceeEEEEeecCCCCcCCCCccccCCCcccEEEEEeEEEEeeeccCCC
Q 025292           80 LWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPI  158 (255)
Q Consensus        80 dWtp~~I~fyVDG~~vr~~~~~~~~g~~~P-~~Pm~l~lnlW~gg~Wat~GG~~~id~s~aPf~a~~~~v~v~~c~~~~~  158 (255)
                      +|+|++|+|||||++||++++.+..+.+|| ++||+|++|||+||+|||+||+.+|||+++||+|.|++|+|++|.+++.
T Consensus       128 ~Wtp~~I~fyVDG~~vr~~~n~~~~g~~~p~~~pm~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~~  207 (267)
T d1umza_         128 LWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVE  207 (267)
T ss_dssp             EECSSEEEEEETTEEEEEEECCGGGTCCCSCSSCBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSS
T ss_pred             EECcceEEEEECCEEEEEEeccccCCCCCCcceEEEEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCCC
Confidence            999999999999999999999988888998 8999999999999999999999999999999999999999999988654


Q ss_pred             CCCCCCCC--CcccCCCCCCCCCCHHHHHHHHHHhhcCeEEcccccCCCCCCCCCccccCh
Q 025292          159 EQTSSKCD--ITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFECVINP  217 (255)
Q Consensus       159 ~~~~~~C~--~~~w~~~~~~~~l~~~q~~~~~~vr~~~m~YdYC~D~~R~p~~p~EC~~~~  217 (255)
                      .   ..|.  ...|.+.+.+++|+..|+++|+|||+||||||||+|++|||.+||||..++
T Consensus       208 ~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~yC~d~~r~~~~p~EC~~~~  265 (267)
T d1umza_         208 A---KFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTIYNYCTDRSRYPSMPPECKRDR  265 (267)
T ss_dssp             S---CCCTTTTCSGGGSGGGSSCCHHHHHHHHHHHHHTEEEEGGGCTTTCSSCCTHHHHHT
T ss_pred             C---cccCCCCCccccccccccCCHHHHHHHHHHHHCCcEEccCCCCCcCCCCCcccCCCC
Confidence            2   2333  233444677899999999999999999999999999999999999998765
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure