Citrus Sinensis ID: 025334

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----
MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTEEALARNSSDDISCVVVKFN
cccccEEEEEEEccccccccccEEEEEEcccccccEEEEEEEEcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccEEEEEEccccEEEEEEccEEEEcccccccccHHHHHHHcccEEEEccccccccccHHHHHHccccccccccccccccEEEEEEcccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEEEcc
ccccEEEEEEccccccccccccEEEEEEEccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHcccHcHcHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccEEEEEEcccccEEEEEccEEEEccccccccHHHHHHHHcccEEEEccccccccccEHHHHHHHccHHHHHHccccccEEEEEEccccEEEEEEcccHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHccccccEEEEEEEEc
mkkhvthgyhlvkgkaghpmEDYVVAQFKqvdenelglfaifdghlsheipdFLRTHLFENilnepnfwqdpesAVRRAYCITDTTILEKAVdlgkggstAVTAILINCEKLVVANVGDSRAVICKNGVakqlsvdhepsserehiegrggfvsnfpgdvprvdgQLAVARAFGdkslkmhlssephvvmetiddDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTEEALarnssddiSCVVVKFN
mkkhvthgyhlvkgkaghpMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNepnfwqdpeSAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGvakqlsvdhepsserehiegrggfvsnfpgDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTEealarnssddiscvvvkfn
MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQdaadaiknikdaRSAARHLTEEALARNSSDDISCVVVKFN
******HGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAK********************FVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQD********************************CVV****
**KHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTEEALARNSSDDISCVVVKFN
MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQ**************EGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTEEALARNSSDDISCVVVKFN
***HVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTEEALARNSSDDISCVVVKFN
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDxxxxxxxxxxxxxxxxxxxxxALARNSSDDISCVVVKFN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query254 2.2.26 [Sep-21-2011]
Q9LDA7289 Probable protein phosphat yes no 1.0 0.878 0.811 1e-122
Q0D673290 Probable protein phosphat yes no 0.988 0.865 0.712 1e-105
Q93YW5283 Probable protein phosphat no no 1.0 0.897 0.692 1e-104
Q9SIU8290 Probable protein phosphat no no 0.988 0.865 0.673 1e-98
Q0JAA0321 Probable protein phosphat no no 0.980 0.775 0.625 1e-89
Q9S9Z7282 Probable protein phosphat no no 0.980 0.882 0.614 1e-86
Q9LME4281 Probable protein phosphat no no 0.980 0.886 0.594 1e-85
Q7XQU7284 Probable protein phosphat no no 0.980 0.876 0.598 5e-82
O64583339 Probable protein phosphat no no 0.988 0.740 0.569 2e-80
Q8L7I4283 Probable protein phosphat no no 0.980 0.879 0.571 4e-77
>sp|Q9LDA7|P2C39_ARATH Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1 Back     alignment and function desciption
 Score =  436 bits (1121), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/254 (81%), Positives = 232/254 (91%)

Query: 1   MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFE 60
           M K +THG+HLVKGKA H MEDYVVA+FK+VD+NELGLFAIFDGHLSHEIPD+L +HLFE
Sbjct: 36  MLKQITHGFHLVKGKAFHEMEDYVVAKFKEVDDNELGLFAIFDGHLSHEIPDYLCSHLFE 95

Query: 61  NILNEPNFWQDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDS 120
           NIL EPNFWQ+PE A+++AY ITDTTIL+KA DLGKGGSTAVTAILINC+KLVVANVGDS
Sbjct: 96  NILKEPNFWQEPEKAIKKAYYITDTTILDKADDLGKGGSTAVTAILINCQKLVVANVGDS 155

Query: 121 RAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM 180
           RAVIC+NGVAK LSVDHEP+ E++ IE RGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM
Sbjct: 156 RAVICQNGVAKPLSVDHEPNMEKDEIENRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM 215

Query: 181 HLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTEEALAR 240
           HLSSEP+V +E IDDD EF+ILASDGLWKVMSNQ+A D+IK IKDA++AA+HL EEA+AR
Sbjct: 216 HLSSEPYVTVEIIDDDAEFLILASDGLWKVMSNQEAVDSIKGIKDAKAAAKHLAEEAVAR 275

Query: 241 NSSDDISCVVVKFN 254
            SSDDIS VVVKF 
Sbjct: 276 KSSDDISVVVVKFQ 289

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q0D673|P2C62_ORYSJ Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1 Back     alignment and function description
>sp|Q93YW5|P2C58_ARATH Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1 Back     alignment and function description
>sp|Q9SIU8|P2C20_ARATH Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3 Back     alignment and function description
>sp|Q0JAA0|P2C44_ORYSJ Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9Z7|P2C10_ARATH Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1 Back     alignment and function description
>sp|Q9LME4|P2C09_ARATH Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1 Back     alignment and function description
>sp|Q7XQU7|P2C41_ORYSJ Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0452000 PE=2 SV=2 Back     alignment and function description
>sp|O64583|P2C28_ARATH Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=2 Back     alignment and function description
>sp|Q8L7I4|P2C17_ARATH Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query254
224128087282 predicted protein [Populus trichocarpa] 1.0 0.900 0.842 1e-122
255584729282 protein phosphatase 2c, putative [Ricinu 0.996 0.897 0.837 1e-122
350536387282 protein phosphatase 2C [Solanum lycopers 1.0 0.900 0.826 1e-122
297830082289 hypothetical protein ARALYDRAFT_478958 [ 1.0 0.878 0.814 1e-121
15232538289 putative protein phosphatase 2C 39 [Arab 1.0 0.878 0.811 1e-120
21539551289 putative protein phosphatase type 2C [Ar 1.0 0.878 0.807 1e-119
312283135288 unnamed protein product [Thellungiella h 1.0 0.881 0.799 1e-119
224114900282 predicted protein [Populus trichocarpa] 1.0 0.900 0.811 1e-118
147796432283 hypothetical protein VITISV_029655 [Viti 0.996 0.893 0.802 1e-117
225461504283 PREDICTED: probable protein phosphatase 0.996 0.893 0.802 1e-117
>gi|224128087|ref|XP_002329078.1| predicted protein [Populus trichocarpa] gi|118484386|gb|ABK94070.1| unknown [Populus trichocarpa] gi|222869747|gb|EEF06878.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/254 (84%), Positives = 232/254 (91%)

Query: 1   MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFE 60
           + KH+THG+HLVKGK+ H MEDYVVAQFK+VD+NELGLFAIFDGHLSH IPD+LR+HLF+
Sbjct: 29  ISKHITHGFHLVKGKSHHDMEDYVVAQFKEVDDNELGLFAIFDGHLSHVIPDYLRSHLFD 88

Query: 61  NILNEPNFWQDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDS 120
           NIL EP+FW  P++A+RRAYCITDTTILEKA DLGKGGSTAVTAILINC+KLVVANVGDS
Sbjct: 89  NILKEPDFWTQPKNAMRRAYCITDTTILEKAGDLGKGGSTAVTAILINCQKLVVANVGDS 148

Query: 121 RAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM 180
           RAVICKNGVAKQLSVDHEPS ERE IE RGGFVSNFPGDVPRVDGQLAVARAFGDKSLK 
Sbjct: 149 RAVICKNGVAKQLSVDHEPSMEREEIENRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKE 208

Query: 181 HLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTEEALAR 240
           HLSSEP V ME IDDDT+ IILASDGLWKVMSNQ+A DA+KNIKDA SAA+ LTEEAL R
Sbjct: 209 HLSSEPDVAMEMIDDDTDCIILASDGLWKVMSNQEAVDAVKNIKDALSAAKRLTEEALNR 268

Query: 241 NSSDDISCVVVKFN 254
            SSDDISCVVVKF 
Sbjct: 269 KSSDDISCVVVKFQ 282

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255584729|ref|XP_002533085.1| protein phosphatase 2c, putative [Ricinus communis] gi|223527124|gb|EEF29300.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|350536387|ref|NP_001234500.1| protein phosphatase 2C [Solanum lycopersicum] gi|46277128|gb|AAS86762.1| protein phosphatase 2C [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|297830082|ref|XP_002882923.1| hypothetical protein ARALYDRAFT_478958 [Arabidopsis lyrata subsp. lyrata] gi|297328763|gb|EFH59182.1| hypothetical protein ARALYDRAFT_478958 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15232538|ref|NP_188144.1| putative protein phosphatase 2C 39 [Arabidopsis thaliana] gi|42572445|ref|NP_974318.1| putative protein phosphatase 2C 39 [Arabidopsis thaliana] gi|75273141|sp|Q9LDA7.1|P2C39_ARATH RecName: Full=Probable protein phosphatase 2C 39; Short=AtPP2C39 gi|9294253|dbj|BAB02155.1| protein phosphatase type 2C [Arabidopsis thaliana] gi|26450048|dbj|BAC42144.1| putative protein phosphatase type 2C [Arabidopsis thaliana] gi|30793813|gb|AAP40359.1| putative protein phosphatase 2C (PP2C) [Arabidopsis thaliana] gi|332642116|gb|AEE75637.1| putative protein phosphatase 2C 39 [Arabidopsis thaliana] gi|332642117|gb|AEE75638.1| putative protein phosphatase 2C 39 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21539551|gb|AAM53328.1| putative protein phosphatase type 2C [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|312283135|dbj|BAJ34433.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|224114900|ref|XP_002316888.1| predicted protein [Populus trichocarpa] gi|222859953|gb|EEE97500.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147796432|emb|CAN70385.1| hypothetical protein VITISV_029655 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225461504|ref|XP_002285109.1| PREDICTED: probable protein phosphatase 2C 39 [Vitis vinifera] gi|302142975|emb|CBI20270.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query254
TAIR|locus:2087095289 AT3G15260 [Arabidopsis thalian 0.996 0.875 0.782 3.6e-105
TAIR|locus:2121373283 AT4G28400 [Arabidopsis thalian 1.0 0.897 0.661 3.1e-90
TAIR|locus:2046046290 PIA1 "PP2C induced by AVRRPM1" 0.988 0.865 0.645 8.9e-86
TAIR|locus:2008341282 AT1G34750 [Arabidopsis thalian 0.976 0.879 0.596 7.3e-75
TAIR|locus:2061579339 AT2G34740 [Arabidopsis thalian 0.988 0.740 0.553 1.6e-72
TAIR|locus:2194734283 AT1G78200 [Arabidopsis thalian 0.980 0.879 0.551 3.1e-67
TAIR|locus:2149363 447 AT5G24940 [Arabidopsis thalian 0.960 0.545 0.438 2e-47
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.960 0.689 0.438 1.4e-46
TAIR|locus:2124784311 WIN2 "HOPW1-1-interacting 2" [ 0.960 0.784 0.422 1.5e-44
TAIR|locus:2029172371 AT1G43900 [Arabidopsis thalian 0.956 0.654 0.422 3.1e-44
TAIR|locus:2087095 AT3G15260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
 Identities = 198/253 (78%), Positives = 222/253 (87%)

Query:     1 MKKHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFE 60
             M K +THG+HLVKGKA H MEDYVVA+FK+VD+NELGLFAIFDGHLSHEIPD+L +HLFE
Sbjct:    36 MLKQITHGFHLVKGKAFHEMEDYVVAKFKEVDDNELGLFAIFDGHLSHEIPDYLCSHLFE 95

Query:    61 NILNEPNFWQDPESAVRRAYCITDTTILEKAVDLGKGGSTAVTAILINCEKLVVANVGDS 120
             NIL EPNFWQ+PE A+++AY ITDTTIL+KA DLGKGGSTAVTAILINC+KLVVANVGDS
Sbjct:    96 NILKEPNFWQEPEKAIKKAYYITDTTILDKADDLGKGGSTAVTAILINCQKLVVANVGDS 155

Query:   121 RAVICKNGVAKQLSVDHEPSSEREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM 180
             RAVIC+NGVAK LSVDHEP+ E++ IE RGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM
Sbjct:   156 RAVICQNGVAKPLSVDHEPNMEKDEIENRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM 215

Query:   181 HLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQXXXXXXXXXXXXRSAARHLTEEALAR 240
             HLSSEP+V +E IDDD EF+ILASDGLWKVMSNQ            ++AA+HL EEA+AR
Sbjct:   216 HLSSEPYVTVEIIDDDAEFLILASDGLWKVMSNQEAVDSIKGIKDAKAAAKHLAEEAVAR 275

Query:   241 NSSDDISCVVVKF 253
              SSDDIS VVVKF
Sbjct:   276 KSSDDISVVVVKF 288
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
TAIR|locus:2121373 AT4G28400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046046 PIA1 "PP2C induced by AVRRPM1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008341 AT1G34750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061579 AT2G34740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194734 AT1G78200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149363 AT5G24940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0D673P2C62_ORYSJ3, ., 1, ., 3, ., 1, 60.71250.98810.8655yesno
Q9LDA7P2C39_ARATH3, ., 1, ., 3, ., 1, 60.81101.00.8788yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.01070028
SubName- Full=Putative uncharacterized protein; (283 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 7e-78
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 2e-72
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 5e-56
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-39
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-37
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 4e-32
PRK14559645 PRK14559, PRK14559, putative protein serine/threon 2e-05
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  235 bits (601), Expect = 7e-78
 Identities = 112/260 (43%), Positives = 150/260 (57%), Gaps = 21/260 (8%)

Query: 7   HGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEP 66
            G     G      ED VV +    +E+  GLF +FDGH  H   +F    L E +L E 
Sbjct: 3   AGVSDKGGDR-KTNEDAVVIKPNLNNEDG-GLFGVFDGHGGHAAGEFASKLLVEELLEEL 60

Query: 67  NFW-----QDPESAVRRAYCITDTTILEKA---VDLGKGGSTAVTAILINCEKLVVANVG 118
                   +D E A+R+A+   D  ILE+A    D  + G+TAV A++    KL VANVG
Sbjct: 61  EETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRG-NKLYVANVG 119

Query: 119 DSRAVICKNGVAKQLSVDHEPSS--EREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDK 176
           DSRAV+C+NG A QL+ DH+P +  ERE IE  GG VSN      RV G LAV RA GD 
Sbjct: 120 DSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVSN-----GRVPGVLAVTRALGDF 174

Query: 177 SLKMHLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAIK---NIKDARSAARHL 233
            LK  +S+EP V +  + +D +F+ILASDGLW V+SNQ+A D ++     +D + AA+ L
Sbjct: 175 DLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQEL 234

Query: 234 TEEALARNSSDDISCVVVKF 253
            + AL R S D+I+ VVV+ 
Sbjct: 235 VDLALRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|237756 PRK14559, PRK14559, putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 254
PLN03145365 Protein phosphatase 2c; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 99.98
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.95
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.93
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.93
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.89
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.85
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.77
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.68
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.92
PRK10693303 response regulator of RpoS; Provisional 89.78
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.8e-48  Score=332.12  Aligned_cols=246  Identities=35%  Similarity=0.555  Sum_probs=207.8

Q ss_pred             CceeEEEeeecCCCCCCCCCceEeeeecc--------CCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCCCCCHHH
Q 025334            3 KHVTHGYHLVKGKAGHPMEDYVVAQFKQV--------DENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPES   74 (254)
Q Consensus         3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~--------~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~~~~~~~   74 (254)
                      ..+.++.+|++|.|+ .|||++++..+..        ...+..+|||||||||+.+++++++.+++.+.+...+...+..
T Consensus        63 ~~~~~~~~s~~G~R~-~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~  141 (365)
T PLN03145         63 PVVRSGAWADIGSRS-SMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEK  141 (365)
T ss_pred             CceEEEEEccccCCC-CCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHH
Confidence            346899999999866 9999987533211        1234689999999999999999999999999876665556788


Q ss_pred             HHHHHHHHHHHHHHhhhcc-cCCCCccEEEEEEEeCCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCc--hHHHHHhcCC
Q 025334           75 AVRRAYCITDTTILEKAVD-LGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREHIEGRGG  151 (254)
Q Consensus        75 ~l~~~~~~~~~~l~~~~~~-~~~~~~tt~~~~~~~~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~--e~~r~~~~g~  151 (254)
                      .|.++|..++..+.+.... ....+|||++++++.++.+|++|+||||+|+++++++.+||+||++.+  |..|+.+.|+
T Consensus       142 al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg  221 (365)
T PLN03145        142 VVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGG  221 (365)
T ss_pred             HHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCC
Confidence            8999999999998765432 234589999999999999999999999999999999999999999997  8889999999


Q ss_pred             eEecCCCCCCccCCccccccccCCccccC-------CcCCCCeEEEEEcCCCCeEEEEEcCCCcccCCHHHHHHHH----
Q 025334          152 FVSNFPGDVPRVDGQLAVARAFGDKSLKM-------HLSSEPHVVMETIDDDTEFIILASDGLWKVMSNQDAADAI----  220 (254)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~tr~~G~~~~~~-------~~~~~p~~~~~~l~~~~~~liL~SDG~~~~l~~~~i~~~~----  220 (254)
                      .+..     .+.++...+||++|+..+|.       .+.++|++..+++.+.+++|||||||||++++++++.+++    
T Consensus       222 ~v~~-----g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l  296 (365)
T PLN03145        222 YVYD-----GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRL  296 (365)
T ss_pred             ceec-----ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHH
Confidence            8863     25566678999999976652       3678999999999986778899999999999999975554    


Q ss_pred             HcccCHHHHHHHHHHHHHhCCCCCCcEEEEEEeC
Q 025334          221 KNIKDARSAARHLTEEALARNSSDDISCVVVKFN  254 (254)
Q Consensus       221 ~~~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~~~  254 (254)
                      ....+|+++|+.|++.|+.+++.||+|||||+|+
T Consensus       297 ~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~  330 (365)
T PLN03145        297 QEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQ  330 (365)
T ss_pred             hcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEee
Confidence            4446899999999999999999999999999984

>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>PRK10693 response regulator of RpoS; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 1e-22
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 2e-22
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 1e-21
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 1e-21
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 1e-21
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 1e-21
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 1e-21
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 1e-21
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 5e-21
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 7e-21
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 8e-21
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 1e-20
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 2e-20
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 6e-20
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 1e-19
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-19
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 5e-11
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 7e-10
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 1e-09
2pom_A372 Tab1 With Manganese Ion Length = 372 1e-08
2j4o_A401 Structure Of Tab1 Length = 401 1e-08
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 5e-05
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 8e-05
2irm_A358 Crystal Structure Of Mitogen-Activated Protein Kina 9e-04
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure 
Iteration: 1

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 122/231 (52%), Gaps = 13/231 (5%)
Query: 34  NELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCITDTTI-----L 88
           +E+  FA++DGH      DF  TH+ + I++     ++ E+ +  A+   D        L
Sbjct: 33  DEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARL 92
Query: 89  EKAVDLGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEP--SSEREHI 146
                L   G+TA  A+L +  +LVVA+VGDSRA++C+ G   +L++DH P    E+E I
Sbjct: 93  SADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERI 152
Query: 147 EGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMH-LSSEP---HVVMETIDDDTEFIIL 202
           +  GGFV+      P V+G+LA+ R+ GD  LK   + +EP    + +   DD   F++L
Sbjct: 153 KKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADD--SFLVL 210
Query: 203 ASDGLWKVMSNQXXXXXXXXXXXXRSAARHLTEEALARNSSDDISCVVVKF 253
            +DG+  ++++Q              AA  +TE+A+   + D+ + VVV F
Sbjct: 211 TTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPF 261
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 1 From Anopheles Gambiae Length = 358 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-102
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-100
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 3e-89
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 5e-89
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 3e-86
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 6e-85
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 3e-81
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-79
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-65
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 1e-61
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 5e-60
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 6e-50
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 2e-31
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 1e-19
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 1e-17
1txo_A237 Putative bacterial enzyme; serine/threonine protei 1e-16
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 5e-16
3rnr_A211 Stage II sporulation E family protein; structural 5e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
 Score =  296 bits (760), Expect = e-102
 Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 13/256 (5%)

Query: 8   GYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPN 67
           G     GK     ED           +E+  FA++DGH      DF  TH+ + I++   
Sbjct: 11  GCASQIGKRKE-NEDRFDFA---QLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLP 66

Query: 68  FWQDPESAVRRAYCITDTTILEKA-----VDLGKGGSTAVTAILINCEKLVVANVGDSRA 122
             ++ E+ +  A+   D      A       L   G+TA  A+L +  +LVVA+VGDSRA
Sbjct: 67  KEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRA 126

Query: 123 VICKNGVAKQLSVDHEPS--SEREHIEGRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKM 180
           ++C+ G   +L++DH P    E+E I+  GGFV+      P V+G+LA+ R+ GD  LK 
Sbjct: 127 ILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKT 186

Query: 181 H-LSSEPHVVMETIDD-DTEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHLTEEAL 238
             + +EP      +   D  F++L +DG+  ++++Q+  D +    D   AA  +TE+A+
Sbjct: 187 SGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAI 246

Query: 239 ARNSSDDISCVVVKFN 254
              + D+ + VVV F 
Sbjct: 247 QYGTEDNSTAVVVPFG 262
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query254
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.92
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.91
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.85
3f79_A255 Probable two-component response regulator; adaptor 99.82
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.43
3eq2_A394 Probable two-component response regulator; adaptor 99.04
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=5.1e-49  Score=327.90  Aligned_cols=248  Identities=30%  Similarity=0.431  Sum_probs=213.2

Q ss_pred             CceeEEEeeecCCCCCCCCCceEeeeeccCCCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Q 025334            3 KHVTHGYHLVKGKAGHPMEDYVVAQFKQVDENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPNFWQDPESAVRRAYCI   82 (254)
Q Consensus         3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~   82 (254)
                      ..+.+|+.+++|+|. .|||++++..   ..++..+|+|||||||+.+|+++++.+.+.+.+......++...|+++|..
T Consensus         6 ~~~~~g~~s~~G~R~-~nED~~~~~~---~~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~   81 (274)
T 2iq1_A            6 SLENVGCASQIGKRK-ENEDRFDFAQ---LTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLE   81 (274)
T ss_dssp             CGGGCEEEEECCSSS-SCCEEEEEEE---CSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred             cCCeEEEEecccCCC-CccceEEEee---CCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence            456789999999976 9999997642   235689999999999999999999999888876544456788999999999


Q ss_pred             HHHHHHhhhcc----cCCCCccEEEEEEEeC-CEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCc--hHHHHHhcCCeEec
Q 025334           83 TDTTILEKAVD----LGKGGSTAVTAILINC-EKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREHIEGRGGFVSN  155 (254)
Q Consensus        83 ~~~~l~~~~~~----~~~~~~tt~~~~~~~~-~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~--e~~r~~~~g~~~~~  155 (254)
                      +++.+.+....    ....+|||++++++.+ .+++++|+||||+|++|++++.+||.||++.+  |+.|+++.||.+..
T Consensus        82 ~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~Ri~~~gG~v~~  161 (274)
T 2iq1_A           82 IDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAW  161 (274)
T ss_dssp             HHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCEEE
T ss_pred             HHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHHHHHHHcCCEEEc
Confidence            99999876532    2346789998888875 69999999999999999999999999999985  89999998888876


Q ss_pred             CCCCCCccCCccccccccCCccccCC-cCCCCeEEEEEcCCC-CeEEEEEcCCCcccCCHHHHHHHHHcccCHHHHHHHH
Q 025334          156 FPGDVPRVDGQLAVARAFGDKSLKMH-LSSEPHVVMETIDDD-TEFIILASDGLWKVMSNQDAADAIKNIKDARSAARHL  233 (254)
Q Consensus       156 ~~~~~~~~~~~~~~tr~~G~~~~~~~-~~~~p~~~~~~l~~~-~~~liL~SDG~~~~l~~~~i~~~~~~~~~~~~~a~~l  233 (254)
                      .....++.++.+.+||++|+..+|+. +.++|++..+++.+. +++|||||||||++++++++.+++....+|+++|+.|
T Consensus       162 ~~~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~~~~~~~~a~~L  241 (274)
T 2iq1_A          162 NSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAV  241 (274)
T ss_dssp             CTTSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHTSSSHHHHHHHH
T ss_pred             CCCCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHHcCCHHHHHHHH
Confidence            54333455678899999999988874 778999999999973 3699999999999999999999999888999999999


Q ss_pred             HHHHHhCCCCCCcEEEEEEeC
Q 025334          234 TEEALARNSSDDISCVVVKFN  254 (254)
Q Consensus       234 ~~~a~~~~~~Dn~Tvivv~~~  254 (254)
                      ++.|+++++.||+||||+++.
T Consensus       242 ~~~A~~~g~~DNiTvivv~~~  262 (274)
T 2iq1_A          242 TEQAIQYGTEDNSTAVVVPFG  262 (274)
T ss_dssp             HHHHHHTTCCSCEEEEEEECT
T ss_pred             HHHHHHcCCCCCeEEEEEEcc
Confidence            999999999999999999874
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 254
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 1e-40
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 1e-26
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (351), Expect = 1e-40
 Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 35/280 (12%)

Query: 3   KHVTHGYHLVKGKAGHPMEDYVVAQFKQVD-ENELGLFAIFDGHLSHEIPDFLRTHLFEN 61
             + +G   ++G     MED   A             FA++DGH   ++  +   HL ++
Sbjct: 19  NGLRYGLSSMQGWRVE-MEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDH 77

Query: 62  ILNEPNFWQDP--------ESAVRRAYCITD---TTILEKAVDLGKGGSTAVTAILINCE 110
           I N  +F            ++ +R  +   D     + EK     + GSTAV  +LI+ +
Sbjct: 78  ITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAV-GVLISPQ 136

Query: 111 KLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREHIEGRGGFVSNFPGDVPRVDGQLA 168
                N GDSR ++C+N      + DH+PS+  E+E I+  GG V        RV+G LA
Sbjct: 137 HTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI-----QRVNGSLA 191

Query: 169 VARAFGDKSLKMHLSSEP----------HVVMETIDDDTEFIILASDGLWKVMSNQDAAD 218
           V+RA GD   K      P             +E  ++D +FIILA DG+W VM N++  D
Sbjct: 192 VSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCD 251

Query: 219 AIKNI----KDARSAARHLTEEALARNSSDDISCVVVKFN 254
            +++      D       + +  L + S D++S +++ F 
Sbjct: 252 FVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFP 291
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query254
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-50  Score=335.79  Aligned_cols=246  Identities=28%  Similarity=0.493  Sum_probs=211.8

Q ss_pred             CceeEEEeeecCCCCCCCCCceEeeeeccC-CCceEEEEEEeCCCCChHHHHHHHHHHHHHHcCCC--------CCCCHH
Q 025334            3 KHVTHGYHLVKGKAGHPMEDYVVAQFKQVD-ENELGLFAIFDGHLSHEIPDFLRTHLFENILNEPN--------FWQDPE   73 (254)
Q Consensus         3 ~~~~~~~~s~~G~~~~~neD~~~~~~~~~~-~~~~~l~~V~DG~Gg~~~a~~~~~~~~~~l~~~~~--------~~~~~~   73 (254)
                      +.+.||+++++|+|+ +|||++.+...... .++..+|||||||||+.+|+++++.+++.+.+...        ...++.
T Consensus        19 ~~~~~g~~s~~G~R~-~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~   97 (295)
T d1a6qa2          19 NGLRYGLSSMQGWRV-EMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVK   97 (295)
T ss_dssp             TTEEEEEEEEEETSS-SCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHH
T ss_pred             CceEEEEEeCccCCC-cccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHHHH
Confidence            678999999999998 99999987554322 35678999999999999999999999999876321        112457


Q ss_pred             HHHHHHHHHHHHHHHhhhcc--cCCCCccEEEEEEEeCCEEEEEEcCCCcEEEEeCCeeeeCCCCCCCCc--hHHHHHhc
Q 025334           74 SAVRRAYCITDTTILEKAVD--LGKGGSTAVTAILINCEKLVVANVGDSRAVICKNGVAKQLSVDHEPSS--EREHIEGR  149 (254)
Q Consensus        74 ~~l~~~~~~~~~~l~~~~~~--~~~~~~tt~~~~~~~~~~~~~~~vGDsr~~~~~~~~~~~lt~dh~~~~--e~~r~~~~  149 (254)
                      +.|+++|..+++.+......  ....+|||++++++.++++|++|+||||+|+++++.+.++|.||++.+  |+.|+...
T Consensus        98 ~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E~~Ri~~~  177 (295)
T d1a6qa2          98 NGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNA  177 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccHHHHhhHhhc
Confidence            77889999998887654332  245689999999999999999999999999999999999999999998  99999999


Q ss_pred             CCeEecCCCCCCccCCccccccccCCccccC---------CcCCCCeEEEEEcCC-CCeEEEEEcCCCcccCCHHHHHHH
Q 025334          150 GGFVSNFPGDVPRVDGQLAVARAFGDKSLKM---------HLSSEPHVVMETIDD-DTEFIILASDGLWKVMSNQDAADA  219 (254)
Q Consensus       150 g~~~~~~~~~~~~~~~~~~~tr~~G~~~~~~---------~~~~~p~~~~~~l~~-~~~~liL~SDG~~~~l~~~~i~~~  219 (254)
                      |+.+..     ++.++.+.+||++|+..+|.         .+.++|++..+++.. .+++|||||||||+.++++|+.++
T Consensus       178 gg~v~~-----~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~  252 (295)
T d1a6qa2         178 GGSVMI-----QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDF  252 (295)
T ss_dssp             TCCEET-----TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHH
T ss_pred             CCcccc-----cccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHHHH
Confidence            998874     47788899999999998873         488999999999863 356999999999999999999998


Q ss_pred             HHc----ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEeC
Q 025334          220 IKN----IKDARSAARHLTEEALARNSSDDISCVVVKFN  254 (254)
Q Consensus       220 ~~~----~~~~~~~a~~l~~~a~~~~~~Dn~Tvivv~~~  254 (254)
                      +.+    ..+|+.+|+.|++.|+.+++.||+|||||+|+
T Consensus       253 v~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~  291 (295)
T d1a6qa2         253 VRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFP  291 (295)
T ss_dssp             HHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECT
T ss_pred             HHHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEecc
Confidence            865    36899999999999999999999999999985
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure