Citrus Sinensis ID: 025388

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250---
Protein Sequence
MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVGGAPSQRSFRRLVVKAAAVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS
Secondary Structure (PSIPRED)
ccccccccccEEEccccccccccccccccccccccccccccccccEEEEEEEEcccccEEccccccEEEEEccccEEEcccEEEEccccccccccEEEEEEcccEEccccEEEEEEEEcccEEEEEcccccEEEEccEEEEEEEcccEEEEEEccccccccccccEEEEEEEccccccccEEEEcccccccccEEEEEEEccccccccccEEEcccccccEEEEccccccEEEcccccEEEEEEccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccEEEccccHEHccccccccccccccccccccccccccccccccEEEEEEEEccccccEEcccccEEEEEEEccHccccccEEEcccccccccccEEEEEcccccccccEEEEEEEEcccEEEEEEcccEEEEEccccEEEEEcccEEEEEEcccHHcccccccEEEEEEEccHccccccEEEcccccccccccEEEEEccccccccccEEEcEEccccEEEEEEcccccEccccccEEEEEEHHHHHEEEc
Coil and Loop (DISEMBL)
MATAQLTASsikvparsltsfdglrpssvkfasvggapsqrSFRRLVVKAAAVvapkytsikplgdRVLVKIKTveektdggiflpsaaqtkpqagevvavgegktvgkaKLDISVKVPGTQVIYSKyagtelefnganhlilreddvvgiletdeikdlkplndRVFIKVAEAEETTAGGLLlteaskekpsigmviavgpgpldeegnrkplsiapgntvmyskyagndfkgsdgtnYIALRASEVMAVLS
Flexible Loop (DISEMBL)
mataqltassikvparsltsfdglrpSSVKFAsvggapsqrsfRRLVVKAAAvvapkytsikplgdrvlVKIKTVeektdggiflpsaaqtkpqagEVVAVGegktvgkakldisvkvpgTQVIYSKYAGTELEFNGANHLILREDDVVGILEtdeikdlkplndRVFIKVAEaeettagglllteaskekpsigMVIAVGpgpldeegnrKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS
Low Complexity Region (SEG)
MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVGGAPSQRSFRRLvvkaaavvaPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS
Disordered region (IsUnstruct)
*****************************************SFRRLVVKAAAVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSA******AGEVVAVGEGKTVGKAKLDISVKVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLT********IGMVIAV*******************NTVMYSKYAGNDFKGSDGTNYIALRA********
Disordered Region (DISOPRED)
*************PARSL*********************************AVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS
Disordered Region (DISEMBL)
**********IKVPARSLTSFDGLRPSSVKFASVGGAPSQRSFRRLVVKAAAVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS
Disordered Region (DISPRO)
********SSIKVPARSLTSFDGLRPSSVKFASV****SQRSFRRLVVKAAAVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVGGAPSQRSFRRLVVKAAAVVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	253	2.2.26 [Sep-21-2011]
O65282	253	20 kDa chaperonin, chloro	yes	no	0.996	0.996	0.751	1e-104
Q02073	255	20 kDa chaperonin, chloro	N/A	no	0.992	0.984	0.614	3e-86
P0A348	103	10 kDa chaperonin OS=Ther	N/A	no	0.375	0.922	0.479	4e-21
P0A347	103	10 kDa chaperonin OS=Ther	yes	no	0.375	0.922	0.479	4e-21
B0K3P5	94	10 kDa chaperonin OS=Ther	yes	no	0.363	0.978	0.537	6e-21
B0KBR4	94	10 kDa chaperonin OS=Ther	yes	no	0.363	0.978	0.537	6e-21
Q60023	94	10 kDa chaperonin OS=Ther	yes	no	0.363	0.978	0.537	8e-21
B1XK80	103	10 kDa chaperonin OS=Syne	yes	no	0.367	0.902	0.5	2e-20
B2A5V2	95	10 kDa chaperonin OS=Natr	yes	no	0.367	0.978	0.515	2e-20
A2BYG2	103	10 kDa chaperonin OS=Proc	yes	no	0.367	0.902	0.5	2e-20

>sp|O65282|CH10C_ARATH 20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2

 Score =  377 bits (967), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/254 (75%), Positives = 215/254 (84%), Gaps = 2/254 (0%)

Query: 1   MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVG-GAPSQRSFRRLVVKAAAVVAPKYT 59
           MA  QLTAS + + ARSL S DGLR SSVKF+S+  G   Q  FRRLVVKAA+VVAPKYT
Sbjct: 1   MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKYT 60

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVP 119
           SIKPLGDRVLVKIK  EEKT GGI LPS AQ+KPQ GEVVAVGEG+T+GK K+DI+V   
Sbjct: 61  SIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPT- 119

Query: 120 GTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTA 179
           G Q+IYSKYAGTE+EFN   HLIL+EDD+VGILET++IKDLKPLNDRVFIKVAEAEE TA
Sbjct: 120 GAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTA 179

Query: 180 GGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTN 239
           GGLLLTE +KEKPSIG VIAVGPG LDEEG   PL ++ G+TV+YSKYAGNDFKG DG+N
Sbjct: 180 GGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSN 239

Query: 240 YIALRASEVMAVLS 253
           YIALRAS+VMA+LS
Sbjct: 240 YIALRASDVMAILS 253

Seems to function only as a co-chaperone, along with cpn60, and in certain cases is essential for the discharge of biologically active proteins from cpn60.
Arabidopsis thaliana (taxid: 3702)

>sp|Q02073|CH10C_SPIOL 20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1

 Score =  318 bits (814), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 158/257 (61%), Positives = 200/257 (77%), Gaps = 6/257 (2%)

Query: 1   MATAQLTASSIKVPARSLTSFDGLRPSS----VKFASVGGAPSQRSFRRLVVKAAAVVAP 56
           MA   LT++S  +   +L SF+GLR +S    +  +    + + RSFR LVV+AA++   
Sbjct: 1   MAATHLTSTS-SLTINTLPSFEGLRSASGISKINVSVAYPSFTSRSFRGLVVRAASITTS 59

Query: 57  KYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISV 116
           KYTS+KPLGDRVL+K K VEEKT  GIFLP+AAQ KPQ+GEVVA+G GK VG  KL ++V
Sbjct: 60  KYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAV 119

Query: 117 KVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEE 176
           K  G +V+YSKY GTE+E +G++HLI++EDD++GILETD++KDLKPLNDR+ IKVAE E 
Sbjct: 120 KT-GAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVEN 178

Query: 177 TTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSD 236
            T+GGLLL E+SKEKPS G V+A GPG LDEEGNR PL +  GNTV+YSKYAGNDFKG D
Sbjct: 179 KTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGVD 238

Query: 237 GTNYIALRASEVMAVLS 253
           G++Y+ LR S+VMAVLS
Sbjct: 239 GSDYMVLRVSDVMAVLS 255

Seems to function only as a co-chaperone, along with cpn60, and in certain cases is essential for the discharge of biologically active proteins from cpn60.

Spinacia oleracea (taxid: 3562)

>sp|P0A348|CH10_THEVL 10 kDa chaperonin OS=Thermosynechococcus vulcanus GN=groS PE=3 SV=2

 Score =  101 bits (252), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 71/96 (73%), Gaps = 1/96 (1%)

Query: 157 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSI 216
           +  +KPL DR+F+KVAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ +
Sbjct: 8   VSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDV 67

Query: 217 APGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
             G+ V+YSKYAG + K + G +Y+ L   +++A++
Sbjct: 68  KVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Thermosynechococcus vulcanus (taxid: 32053)

>sp|P0A347|CH10_THEEB 10 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groS PE=3 SV=2

 Score =  101 bits (252), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 71/96 (73%), Gaps = 1/96 (1%)

Query: 157 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSI 216
           +  +KPL DR+F+KVAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ +
Sbjct: 8   VSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDV 67

Query: 217 APGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
             G+ V+YSKYAG + K + G +Y+ L   +++A++
Sbjct: 68  KVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Thermosynechococcus elongatus (strain BP-1) (taxid: 197221)

>sp|B0K3P5|CH10_THEPX 10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1

 Score =  101 bits (251), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 50/93 (53%), Positives = 70/93 (75%), Gaps = 1/93 (1%)

Query: 61  IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPG 120
           +KPLGDRV+VK+   EE T GG+ LP  A+ KPQ GEVVAVG G+ +   K+++ VKV G
Sbjct: 3   LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKV-G 61

Query: 121 TQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
            +VI+SKYAGTE++ +G  +L+LRE D++ I+E
Sbjct: 62  DRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Thermoanaerobacter sp. (strain X514) (taxid: 399726)

>sp|B0KBR4|CH10_THEP3 10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1

 Score =  101 bits (251), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 50/93 (53%), Positives = 70/93 (75%), Gaps = 1/93 (1%)

Query: 61  IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPG 120
           +KPLGDRV+VK+   EE T GG+ LP  A+ KPQ GEVVAVG G+ +   K+++ VKV G
Sbjct: 3   LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKV-G 61

Query: 121 TQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
            +VI+SKYAGTE++ +G  +L+LRE D++ I+E
Sbjct: 62  DRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) (taxid: 340099)

>sp|Q60023|CH10_THEBR 10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1

 Score =  100 bits (250), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 50/93 (53%), Positives = 70/93 (75%), Gaps = 1/93 (1%)

Query: 61  IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPG 120
           +KPLGDRV+VK+   EE T GG+ LP  A+ KPQ GEVVAVG G+ +   K+++ VKV G
Sbjct: 3   LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKV-G 61

Query: 121 TQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
            +VI+SKYAGTE++ +G  +L+LRE D++ I+E
Sbjct: 62  DRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Thermoanaerobacter brockii (taxid: 29323)

>sp|B1XK80|CH10_SYNP2 10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=groS PE=3 SV=1

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 70/94 (74%), Gaps = 1/94 (1%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           LKPL DRVF+KV+E+EE TAGG+LL +++KEKP IG V+AVG G  +++G+R  + +  G
Sbjct: 11  LKPLGDRVFVKVSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVDVKVG 70

Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 253
           + V+YSKYAG D K S G +Y+ L   +++A ++
Sbjct: 71  DKVLYSKYAGTDIKLS-GDDYVLLSEKDILATVA 103

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (taxid: 32049)

>sp|B2A5V2|CH10_NATTJ 10 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groS PE=3 SV=1

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/95 (51%), Positives = 72/95 (75%), Gaps = 2/95 (2%)

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKV 118
           ++KPLGDR+++KI   EEKT+ GI LP  A+ KPQ GEVVAVG GKT+   +K++  VK 
Sbjct: 2   NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKA 61

Query: 119 PGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
            G +V+YSK+AG E+E +G  +LI+R+DD++ ++E
Sbjct: 62  -GDKVVYSKFAGNEVEVDGEEYLIMRQDDILAVIE 95

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) (taxid: 457570)

>sp|A2BYG2|CH10_PROM5 10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9515) GN=groS PE=3 SV=1

 Score = 99.4 bits (246), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 70/94 (74%), Gaps = 1/94 (1%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           +KPL DR+FIKV+E+EE TAGG+LL +++KEKP +G V  VGPG L+++G+R+   ++ G
Sbjct: 11  VKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIG 70

Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 253
           + V+YSKYAG D K   G  Y+ L   +++AV+S
Sbjct: 71  DKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVVS 103

Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.

Prochlorococcus marinus (strain MIT 9515) (taxid: 167542)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
255550363	253	groes chaperonin, putative [Ricinus comm	0.996	0.996	0.814	1e-116
224068518	256	predicted protein [Populus trichocarpa]	0.996	0.984	0.801	1e-112
118489858	256	unknown [Populus trichocarpa x Populus d	0.996	0.984	0.797	1e-112
224141565	258	predicted protein [Populus trichocarpa]	0.996	0.976	0.803	1e-111
21780187	256	cp10-like protein [Gossypium hirsutum]	0.996	0.984	0.778	1e-109
225444649	251	PREDICTED: 20 kDa chaperonin, chloroplas	0.968	0.976	0.760	1e-105
356556406	253	PREDICTED: 20 kDa chaperonin, chloroplas	0.976	0.976	0.756	1e-103
15242045	253	chaperonin 20 [Arabidopsis thaliana] gi|	0.996	0.996	0.751	1e-102
388511263	254	unknown [Medicago truncatula]	0.988	0.984	0.719	1e-100
388494688	254	unknown [Medicago truncatula]	0.988	0.984	0.719	1e-100

>gi|255550363|ref|XP_002516232.1| groes chaperonin, putative [Ricinus communis] gi|223544718|gb|EEF46234.1| groes chaperonin, putative [Ricinus communis]

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/254 (81%), Positives = 235/254 (92%), Gaps = 2/254 (0%)

Query: 1   MATAQLTASSIKVPARSLTSFDGLRPSSVKFASV-GGAPSQRSFRRLVVKAAAVVAPKYT 59
           MATAQLTASS+ + AR+LTSF+GLRPS+VKFAS+  G  SQRSFR LVVKAA VVAPKYT
Sbjct: 1   MATAQLTASSVSLSARNLTSFEGLRPSTVKFASLKAGGLSQRSFRSLVVKAATVVAPKYT 60

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVP 119
           SIKPLGDRVL+KIK  EEKTDGGI LP++AQTKPQ GEVVAVGEG+T+GK KLDISVK  
Sbjct: 61  SIKPLGDRVLLKIKVAEEKTDGGILLPTSAQTKPQGGEVVAVGEGRTIGKNKLDISVKT- 119

Query: 120 GTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTA 179
           G QV+YSKYAGTE+EFNG++HLIL+EDD+VG+LETD+IKDLKPLNDRVFIK+A+AEE TA
Sbjct: 120 GAQVVYSKYAGTEVEFNGSSHLILKEDDIVGVLETDDIKDLKPLNDRVFIKIADAEEKTA 179

Query: 180 GGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTN 239
           GGLLLTEA+KEKPSIG VIAVGPG LDEEGNR+PLS++PGN+V+YSKYAGNDFKGSDGTN
Sbjct: 180 GGLLLTEATKEKPSIGTVIAVGPGTLDEEGNRRPLSVSPGNSVLYSKYAGNDFKGSDGTN 239

Query: 240 YIALRASEVMAVLS 253
           YIALRAS+VMAVLS
Sbjct: 240 YIALRASDVMAVLS 253

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068518|ref|XP_002326137.1| predicted protein [Populus trichocarpa] gi|118488687|gb|ABK96154.1| unknown [Populus trichocarpa] gi|222833330|gb|EEE71807.1| predicted protein [Populus trichocarpa]

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/257 (80%), Positives = 234/257 (91%), Gaps = 5/257 (1%)

Query: 1   MATAQLTASSIKVPARSLTSFDGLRPSSVKFASV----GGAPSQRSFRRLVVKAAAVVAP 56
           MATAQLTASSI V AR+L+SF+GLR S+VKFAS     G A SQR FR LVVKAA VVAP
Sbjct: 1   MATAQLTASSISVSARNLSSFEGLRASNVKFASFKPAGGFALSQRPFRCLVVKAATVVAP 60

Query: 57  KYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISV 116
           KYTSIKPLGDRVLVKIKTVEEK++GGI LPS+AQTKPQAGEVVAVGEGK++GK KLDISV
Sbjct: 61  KYTSIKPLGDRVLVKIKTVEEKSEGGILLPSSAQTKPQAGEVVAVGEGKSIGKTKLDISV 120

Query: 117 KVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEE 176
           K  G +V+YSKYAGTE+EF+G++HLIL+EDD++GILETD+IKDLKPLNDRVFIK+AEAEE
Sbjct: 121 KT-GARVVYSKYAGTEVEFDGSSHLILKEDDIIGILETDDIKDLKPLNDRVFIKLAEAEE 179

Query: 177 TTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSD 236
            TAGGLLLTEA+KEKPSIG VIAVGPGPLDEEGNRK L ++PG+TV+YSKYAGNDFKGSD
Sbjct: 180 KTAGGLLLTEATKEKPSIGTVIAVGPGPLDEEGNRKALPVSPGSTVLYSKYAGNDFKGSD 239

Query: 237 GTNYIALRASEVMAVLS 253
           G NYIAL+AS+VMA+LS
Sbjct: 240 GANYIALKASDVMAILS 256

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489858|gb|ABK96728.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/257 (79%), Positives = 233/257 (90%), Gaps = 5/257 (1%)

Query: 1   MATAQLTASSIKVPARSLTSFDGLRPSSVKFASV----GGAPSQRSFRRLVVKAAAVVAP 56
           MATAQLTASSI V AR+L+S +GLR S+VKFAS     G A SQR FR LVVKAA VVAP
Sbjct: 1   MATAQLTASSISVSARNLSSLEGLRASNVKFASFKPAGGFALSQRPFRCLVVKAATVVAP 60

Query: 57  KYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISV 116
           KYTSIKPLGDRVLVKIKTVEEK++GGI LPS+AQTKPQAGEVVAVGEGK+ GK KLDISV
Sbjct: 61  KYTSIKPLGDRVLVKIKTVEEKSEGGILLPSSAQTKPQAGEVVAVGEGKSTGKTKLDISV 120

Query: 117 KVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEE 176
           K  G +V+YSKYAGTE+EF+G++HLIL+EDD++GILETD+I+DLKPLNDRVFIK+AEAEE
Sbjct: 121 KT-GARVVYSKYAGTEVEFDGSSHLILKEDDIIGILETDDIRDLKPLNDRVFIKIAEAEE 179

Query: 177 TTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSD 236
            TAGGLLLTEA+KEKPSIG VIAVGPGPLDEEGNRK LS++PG+TV+YSKYAGNDFKGSD
Sbjct: 180 KTAGGLLLTEATKEKPSIGTVIAVGPGPLDEEGNRKALSVSPGSTVLYSKYAGNDFKGSD 239

Query: 237 GTNYIALRASEVMAVLS 253
           G NYIAL+AS+VMA+LS
Sbjct: 240 GANYIALKASDVMAILS 256

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141565|ref|XP_002324138.1| predicted protein [Populus trichocarpa] gi|222865572|gb|EEF02703.1| predicted protein [Populus trichocarpa]

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 208/259 (80%), Positives = 233/259 (89%), Gaps = 7/259 (2%)

Query: 1   MATAQLTASSIKVPARSLTSFDGLRPSSVKFAS------VGGAPSQRSFRRLVVKAAAVV 54
           MATAQLTA SI V AR+L+SF+GLR S+VKFAS      VG   S+RSF+ LVVKAA VV
Sbjct: 1   MATAQLTAFSISVSARNLSSFEGLRASNVKFASFKPLVGVGLPLSRRSFQGLVVKAATVV 60

Query: 55  APKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI 114
           APKYTSI PLGDRVLVKIKTVEEKT+ GI LPS+AQ+KPQ GEVVAVGEGKT+GKAKLDI
Sbjct: 61  APKYTSITPLGDRVLVKIKTVEEKTESGILLPSSAQSKPQGGEVVAVGEGKTIGKAKLDI 120

Query: 115 SVKVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEA 174
           SVK  GTQV+YSKYAGTE+EF+G++HLIL+EDD+VGILETD+IKDLKPLNDRVFIKVAEA
Sbjct: 121 SVKT-GTQVVYSKYAGTEVEFDGSSHLILKEDDIVGILETDDIKDLKPLNDRVFIKVAEA 179

Query: 175 EETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKG 234
           EE TAGGLLLTEA+KEKPSIG VIA+GPGPLDEEGNRK LS++PGNTV+YSKYAGNDFKG
Sbjct: 180 EEKTAGGLLLTEATKEKPSIGTVIAIGPGPLDEEGNRKALSVSPGNTVLYSKYAGNDFKG 239

Query: 235 SDGTNYIALRASEVMAVLS 253
           SDG  YIALRAS+VMA+LS
Sbjct: 240 SDGAIYIALRASDVMAILS 258

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21780187|gb|AAM77651.1|AF522274_1 cp10-like protein [Gossypium hirsutum]

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/257 (77%), Positives = 225/257 (87%), Gaps = 5/257 (1%)

Query: 1   MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVG----GAPSQRSFRRLVVKAAAVVAP 56
           MAT+QLTASS+   AR+L S  GLR S+VKF+S G    GA + RSFR LVVKAA VVAP
Sbjct: 1   MATSQLTASSVTASARNLASLQGLRLSTVKFSSFGTLKPGAVTSRSFRGLVVKAATVVAP 60

Query: 57  KYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISV 116
           KYTS+KPLGDRVLVKIK  EEKT+GGI LP+ AQ+KPQ GEVVAVGEGKT+G  K + SV
Sbjct: 61  KYTSVKPLGDRVLVKIKETEEKTEGGILLPTTAQSKPQGGEVVAVGEGKTIGNTKSESSV 120

Query: 117 KVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEE 176
           K  G QVIYSKYAGTE+EFNGANHL+L+EDD+VG+LETD+IKDLKPLNDRVFIKV+EAEE
Sbjct: 121 KT-GAQVIYSKYAGTEVEFNGANHLLLKEDDIVGLLETDDIKDLKPLNDRVFIKVSEAEE 179

Query: 177 TTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSD 236
            TAGGLLLTEASKEKPSIG VIAVGPG LDEEGN KPLS++PGNTV+YSKYAGNDFKG+D
Sbjct: 180 KTAGGLLLTEASKEKPSIGTVIAVGPGTLDEEGNLKPLSVSPGNTVLYSKYAGNDFKGND 239

Query: 237 GTNYIALRASEVMAVLS 253
           G+NYIALRAS+VMAVLS
Sbjct: 240 GSNYIALRASDVMAVLS 256

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444649|ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera] gi|50660327|gb|AAT80888.1| chloroplast chaperonin 21 [Vitis vinifera] gi|297738526|emb|CBI27771.3| unnamed protein product [Vitis vinifera]

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/251 (76%), Positives = 221/251 (88%), Gaps = 6/251 (2%)

Query: 8   ASSIKVPARSLTSFDGLRPSSVKFASVG-----GAPSQRSFRRLVVKAAAVVAPKYTSIK 62
           A++  +  RSL SF+GLRPS+V+ +S+G     G  +QRSFR LVV+AA VV PKYTS+K
Sbjct: 2   ATAPTISTRSLPSFEGLRPSTVRISSMGLPLKAGGLTQRSFRSLVVRAATVVTPKYTSLK 61

Query: 63  PLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPGTQ 122
           PLGDRVLVKIKT EEKT GGI LP+ AQTKPQ GEVVAVGEGKT+GK KLDI VK  G Q
Sbjct: 62  PLGDRVLVKIKTAEEKTVGGILLPTTAQTKPQGGEVVAVGEGKTIGKNKLDICVKT-GAQ 120

Query: 123 VIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGL 182
           V+YSKYAGTE+EFNG+NHLIL+EDD+VGILETD++KDLKPLNDRV IKVAEAEE TAGGL
Sbjct: 121 VVYSKYAGTEVEFNGSNHLILKEDDIVGILETDDVKDLKPLNDRVLIKVAEAEEKTAGGL 180

Query: 183 LLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIA 242
           LLTEASKEKPSIG V+AVGPGPLDE+G RKPLS++PGNTV+YSKYAGNDFKGSDG++YIA
Sbjct: 181 LLTEASKEKPSIGTVVAVGPGPLDEDGKRKPLSVSPGNTVLYSKYAGNDFKGSDGSDYIA 240

Query: 243 LRASEVMAVLS 253
           L+AS++MAVLS
Sbjct: 241 LKASDIMAVLS 251

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556406|ref|XP_003546517.1| PREDICTED: 20 kDa chaperonin, chloroplastic-like [Glycine max] gi|255647873|gb|ACU24395.1| unknown [Glycine max]

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/259 (75%), Positives = 221/259 (85%), Gaps = 12/259 (4%)

Query: 1   MATAQLTA--SSIKVPARSLTSFDGLRPSSVKFASVG----GAPSQRSFRRLVVKAAAVV 54
           MA+AQLTA  SSI     S  SF+GLRPS+V+FAS G    G  SQRSFR LVVKAA VV
Sbjct: 1   MASAQLTAIASSI-----STASFEGLRPSAVQFASTGRIRIGNLSQRSFRGLVVKAATVV 55

Query: 55  APKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI 114
           APKYT+IKPLGDRVL+KIK  EEKT+GGI LPS AQTKPQ GEVVAVGEGKTVGK  ++I
Sbjct: 56  APKYTAIKPLGDRVLIKIKEAEEKTEGGILLPSTAQTKPQGGEVVAVGEGKTVGKNNVEI 115

Query: 115 SVKVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEA 174
           SVK  G QV+YSKYAGTE++FNG  HLI+++DD+VGILETD+IKDLKPLNDRV IKVAEA
Sbjct: 116 SVKT-GAQVVYSKYAGTEVDFNGTKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEA 174

Query: 175 EETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKG 234
           EE T+GGLLLTEA+K+KPSIG VIAVGPG LDEEGNRKPLS+ PGNTV+YSKYAGNDFKG
Sbjct: 175 EEKTSGGLLLTEATKDKPSIGTVIAVGPGHLDEEGNRKPLSVTPGNTVLYSKYAGNDFKG 234

Query: 235 SDGTNYIALRASEVMAVLS 253
            DG++YI LR S+VMAVLS
Sbjct: 235 KDGSDYITLRVSDVMAVLS 253

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242045|ref|NP_197572.1| chaperonin 20 [Arabidopsis thaliana] gi|30687936|ref|NP_851045.1| chaperonin 20 [Arabidopsis thaliana] gi|334187803|ref|NP_001190350.1| chaperonin 20 [Arabidopsis thaliana] gi|297808145|ref|XP_002871956.1| hypothetical protein ARALYDRAFT_488978 [Arabidopsis lyrata subsp. lyrata] gi|12643263|sp|O65282.2|CH10C_ARATH RecName: Full=20 kDa chaperonin, chloroplastic; AltName: Full=Chaperonin 10; Short=Ch-CPN10; Short=Cpn10; AltName: Full=Chaperonin 20; AltName: Full=Protein Cpn21; Flags: Precursor gi|10179872|gb|AAG13931.1|AF268068_1 chaperonin 10 [Arabidopsis thaliana] gi|16226815|gb|AAL16269.1|AF428339_1 AT5g20720/T1M15_120 [Arabidopsis thaliana] gi|16226911|gb|AAL16296.1|AF428366_1 AT5g20720/T1M15_120 [Arabidopsis thaliana] gi|4127456|emb|CAA09368.1| Cpn21 protein [Arabidopsis thaliana] gi|14334612|gb|AAK59484.1| putative chloroplast Cpn21 protein [Arabidopsis thaliana] gi|14587373|dbj|BAB61619.1| chaperonin 20 [Arabidopsis thaliana] gi|17065646|gb|AAL33817.1| putative chloroplast Cpn21 protein [Arabidopsis thaliana] gi|297317793|gb|EFH48215.1| hypothetical protein ARALYDRAFT_488978 [Arabidopsis lyrata subsp. lyrata] gi|332005498|gb|AED92881.1| chaperonin 20 [Arabidopsis thaliana] gi|332005499|gb|AED92882.1| chaperonin 20 [Arabidopsis thaliana] gi|332005500|gb|AED92883.1| chaperonin 20 [Arabidopsis thaliana]

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/254 (75%), Positives = 215/254 (84%), Gaps = 2/254 (0%)

Query: 1   MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVG-GAPSQRSFRRLVVKAAAVVAPKYT 59
           MA  QLTAS + + ARSL S DGLR SSVKF+S+  G   Q  FRRLVVKAA+VVAPKYT
Sbjct: 1   MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKYT 60

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVP 119
           SIKPLGDRVLVKIK  EEKT GGI LPS AQ+KPQ GEVVAVGEG+T+GK K+DI+V   
Sbjct: 61  SIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPT- 119

Query: 120 GTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTA 179
           G Q+IYSKYAGTE+EFN   HLIL+EDD+VGILET++IKDLKPLNDRVFIKVAEAEE TA
Sbjct: 120 GAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTA 179

Query: 180 GGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTN 239
           GGLLLTE +KEKPSIG VIAVGPG LDEEG   PL ++ G+TV+YSKYAGNDFKG DG+N
Sbjct: 180 GGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSN 239

Query: 240 YIALRASEVMAVLS 253
           YIALRAS+VMA+LS
Sbjct: 240 YIALRASDVMAILS 253

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511263|gb|AFK43693.1| unknown [Medicago truncatula]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/257 (71%), Positives = 219/257 (85%), Gaps = 7/257 (2%)

Query: 1   MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVG----GAPSQRSFRRLVVKAAAVVAP 56
           MA++QLTASSI    RS+ SF+GLRPSSV+F S      G P++RSF+ L+VKAA VVAP
Sbjct: 1   MASSQLTASSIST--RSVASFEGLRPSSVQFHSARHVRIGNPARRSFKALIVKAATVVAP 58

Query: 57  KYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISV 116
           KYT+IKPLGDRVLVKIK  EEKT  GI LPS+AQTKPQ GEVVAVGEGKT+GK +++ISV
Sbjct: 59  KYTAIKPLGDRVLVKIKEAEEKTQSGILLPSSAQTKPQGGEVVAVGEGKTLGKNQVEISV 118

Query: 117 KVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEE 176
           K PG QV+YSKYAGTE++FNG  HL+L++DD+VGILETD+IKDLKPLNDRV IK+ +AEE
Sbjct: 119 K-PGAQVVYSKYAGTEVDFNGEKHLVLKDDDIVGILETDDIKDLKPLNDRVLIKIEKAEE 177

Query: 177 TTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSD 236
            T+GGL LTEA+KEKPS G V+AVGPG +DEEGNRKPL++A GNTV+YSKYAGNDFKG D
Sbjct: 178 KTSGGLYLTEATKEKPSFGTVVAVGPGLVDEEGNRKPLTVASGNTVLYSKYAGNDFKGKD 237

Query: 237 GTNYIALRASEVMAVLS 253
           G  YI LR+S+VMAVLS
Sbjct: 238 GFEYITLRSSDVMAVLS 254

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494688|gb|AFK35410.1| unknown [Medicago truncatula]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/257 (71%), Positives = 219/257 (85%), Gaps = 7/257 (2%)

Query: 1   MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVG----GAPSQRSFRRLVVKAAAVVAP 56
           MA++QLTASSI    RS+ SF+GLRPSSV+F S      G P++RSF+ L+VKAA VVAP
Sbjct: 1   MASSQLTASSIST--RSVASFEGLRPSSVQFHSARHVRIGNPARRSFKALIVKAATVVAP 58

Query: 57  KYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISV 116
           KYT+IKPLGDRVLVKIK  EEKT  GI LPS+AQTKPQ GEVVAVGEGKT+GK +++ISV
Sbjct: 59  KYTAIKPLGDRVLVKIKEAEEKTQSGILLPSSAQTKPQGGEVVAVGEGKTLGKNQVEISV 118

Query: 117 KVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEE 176
           K PG QV+YSKYAGTE++FNG  HLIL++DD+VGILETD+IKDLKPLNDRV IK+ +AEE
Sbjct: 119 K-PGAQVVYSKYAGTEVDFNGEKHLILKDDDIVGILETDDIKDLKPLNDRVLIKIEKAEE 177

Query: 177 TTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSD 236
            T+GGL LTEA+KEKPS G V+AVGPG +DEEGNRKPL++A GNTV+YSKYAGNDFKG D
Sbjct: 178 KTSGGLYLTEATKEKPSFGTVVAVGPGLVDEEGNRKPLTVASGNTVLYSKYAGNDFKGKD 237

Query: 237 GTNYIALRASEVMAVLS 253
           G  Y+ LR+S+VMAVLS
Sbjct: 238 GFEYVTLRSSDVMAVLS 254

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
TAIR|locus:2180454	253	CPN20 "chaperonin 20" [Arabido	0.996	0.996	0.720	9.3e-91
UNIPROTKB|P09621	100	groS "10 kDa chaperonin" [Myco	0.371	0.94	0.479	1.7e-20
TIGR_CMR|GSU_3339	95	GSU_3339 "chaperonin, 10 kDa"	0.367	0.978	0.484	4.4e-20
TIGR_CMR|BA_0266	94	BA_0266 "chaperonin, 10 kDa" [	0.363	0.978	0.494	1.5e-19
TIGR_CMR|CHY_0806	94	CHY_0806 "chaperonin, 10 kDa"	0.359	0.968	0.526	5.1e-19
TIGR_CMR|CBU_1719	96	CBU_1719 "chaperonin, 10 kDa"	0.359	0.947	0.442	1.2e-17
GENEDB_PFALCIPARUM|PF13_0180	258	PF13_0180 "chaperonin, putativ	0.747	0.732	0.253	7.7e-16
UNIPROTKB|Q8IDZ8	258	PfCpn20 "Cochaperonin" [Plasmo	0.747	0.732	0.253	7.7e-16
TIGR_CMR|SPO_0886	95	SPO_0886 "chaperonin, 10 kDa"	0.371	0.989	0.414	1.3e-15
TIGR_CMR|DET_1427	98	DET_1427 "chaperonin GroES" [D	0.351	0.908	0.377	3e-14

TAIR|locus:2180454 CPN20 "chaperonin 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 905 (323.6 bits), Expect = 9.3e-91, P = 9.3e-91
 Identities = 183/254 (72%), Positives = 206/254 (81%)

Query:     1 MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVG-GAPSQRSFRRLXXXXXXXXXPKYT 59
             MA  QLTAS + + ARSL S DGLR SSVKF+S+  G   Q  FRRL         PKYT
Sbjct:     1 MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKYT 60

Query:    60 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVP 119
             SIKPLGDRVLVKIK  EEKT GGI LPS AQ+KPQ GEVVAVGEG+T+GK K+DI+V   
Sbjct:    61 SIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPT- 119

Query:   120 GTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTA 179
             G Q+IYSKYAGTE+EFN   HLIL+EDD+VGILET++IKDLKPLNDRVFIKVAEAEE TA
Sbjct:   120 GAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTA 179

Query:   180 GGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTN 239
             GGLLLTE +KEKPSIG VIAVGPG LDEEG   PL ++ G+TV+YSKYAGNDFKG DG+N
Sbjct:   180 GGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSN 239

Query:   240 YIALRASEVMAVLS 253
             YIALRAS+VMA+LS
Sbjct:   240 YIALRASDVMAILS 253

GO:0005737 "cytoplasm" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;ISS;IDA

GO:0005516 "calmodulin binding" evidence=TAS

GO:0009579 "thylakoid" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005739 "mitochondrion" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009658 "chloroplast organization" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

GO:0009536 "plastid" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:1901671 "positive regulation of superoxide dismutase activity" evidence=IDA

UNIPROTKB|P09621 groS "10 kDa chaperonin" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 46/96 (47%), Positives = 69/96 (71%)

Query:   159 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIA 217
             ++KPL D++ ++  EAE TTA GL++ + +KEKP  G V+AVGPG  DE+G ++ PL +A
Sbjct:     5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVA 64

Query:   218 PGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 253
              G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    65 EGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99

GO:0005576 "extracellular region" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0009408 "response to heat" evidence=IEP

GO:0034605 "cellular response to heat" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0046677 "response to antibiotic" evidence=IEP

GO:0046872 "metal ion binding" evidence=IDA

GO:0051260 "protein homooligomerization" evidence=IPI

TIGR_CMR|GSU_3339 GSU_3339 "chaperonin, 10 kDa" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 46/95 (48%), Positives = 67/95 (70%)

Query:    60 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKV 118
             +++PL DR+LVK    E KT GGIF+P  A+ KPQ GE+VAVG GK     K + + +KV
Sbjct:     2 NLRPLQDRILVKRIEEETKTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPVDLKV 61

Query:   119 PGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
              G +V++ KYAGT+++  G   LI+REDD++G++E
Sbjct:    62 -GDKVLFGKYAGTDIKIEGQEFLIMREDDILGVIE 95

GO:0006457 "protein folding" evidence=ISS

GO:0051087 "chaperone binding" evidence=ISS

TIGR_CMR|BA_0266 BA_0266 "chaperonin, 10 kDa" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 46/93 (49%), Positives = 67/93 (72%)

Query:   160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
             LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G
Sbjct:     2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAG 61

Query:   220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
             + +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    62 DLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93

GO:0006457 "protein folding" evidence=ISS

GO:0051087 "chaperone binding" evidence=ISS

TIGR_CMR|CHY_0806 CHY_0806 "chaperonin, 10 kDa" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 49/93 (52%), Positives = 64/93 (68%)

Query:    62 KPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKVPG 120
             +PL DRVLVK    EE T  GI +P  A+ KPQ GEV AVG G+ +    ++ + VKV G
Sbjct:     3 RPLHDRVLVKPLPTEEVTKSGIVIPDTAKEKPQQGEVKAVGSGRILENGERVPMEVKV-G 61

Query:   121 TQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
              +V YSKYAGTE++ +G  +LILRE D++GILE
Sbjct:    62 DRVFYSKYAGTEVKIDGEEYLILRESDILGILE 94

GO:0006457 "protein folding" evidence=ISS

GO:0051087 "chaperone binding" evidence=ISS

TIGR_CMR|CBU_1719 CBU_1719 "chaperonin, 10 kDa" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 42/95 (44%), Positives = 68/95 (71%)

Query:    61 IKPLGDRVLVKIKTVEEKTD-GGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKV 118
             I+PL DRV+V+ +  EE+T  GGI +P +A  KP  GEV++VG GK +   ++  + VKV
Sbjct:     3 IRPLHDRVVVR-RLEEERTSAGGIVIPDSAAEKPSRGEVISVGPGKPLDNGEVRSLDVKV 61

Query:   119 PGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
              G Q+++ KYAGTE++  G  ++++REDD++G++E
Sbjct:    62 -GDQILFGKYAGTEVKLAGDEYIVMREDDIMGVIE 95

GO:0006457 "protein folding" evidence=ISS

GO:0016887 "ATPase activity" evidence=ISS

GENEDB_PFALCIPARUM|PF13_0180 PF13_0180 "chaperonin, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 50/197 (25%), Positives = 103/197 (52%)

Query:    61 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEG--KTVGKAKLDISVKV 118
             + PL + +L++     + TD G+F+    +     G+V++VG G   T    ++ I ++V
Sbjct:    61 LTPLNEYILIQKDEAGDTTDSGVFIGDTLKKNQYIGKVLSVGAGAINTKNGERIPIDIQV 120

Query:   119 PGTQVIYSKYAGTELEFNGANHLILREDDVVG-ILETDEIKDLK--PLNDRVFIKVAEAE 175
              G  VI++   G ++++N    L++  ++V+G I +++EI  L   PL DRV IK+    
Sbjct:   121 -GDVVIFNPNDGNKVKYNDKECLLISNEEVLGKINDSNEINPLNITPLYDRVLIKLINPN 179

Query:   176 ETTAGGLLLTEA-SKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKG 234
               +   +++ E+ + +K + G V+A+G G  DE   + P+ +   + + +S ++    + 
Sbjct:   180 VNSDSLIIIPESKNNDKVTDGQVVAIGNGIYDENNQKVPIDLRIDDYIKFSPFSNESCEF 239

Query:   235 S-DGTNYIALRASEVMA 250
             +     Y  ++A  VMA
Sbjct:   240 TYQNAKYTFVKARYVMA 256

GO:0020011 "apicoplast" evidence=ISS

UNIPROTKB|Q8IDZ8 PfCpn20 "Cochaperonin" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 50/197 (25%), Positives = 103/197 (52%)

Query:    61 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEG--KTVGKAKLDISVKV 118
             + PL + +L++     + TD G+F+    +     G+V++VG G   T    ++ I ++V
Sbjct:    61 LTPLNEYILIQKDEAGDTTDSGVFIGDTLKKNQYIGKVLSVGAGAINTKNGERIPIDIQV 120

Query:   119 PGTQVIYSKYAGTELEFNGANHLILREDDVVG-ILETDEIKDLK--PLNDRVFIKVAEAE 175
              G  VI++   G ++++N    L++  ++V+G I +++EI  L   PL DRV IK+    
Sbjct:   121 -GDVVIFNPNDGNKVKYNDKECLLISNEEVLGKINDSNEINPLNITPLYDRVLIKLINPN 179

Query:   176 ETTAGGLLLTEA-SKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKG 234
               +   +++ E+ + +K + G V+A+G G  DE   + P+ +   + + +S ++    + 
Sbjct:   180 VNSDSLIIIPESKNNDKVTDGQVVAIGNGIYDENNQKVPIDLRIDDYIKFSPFSNESCEF 239

Query:   235 S-DGTNYIALRASEVMA 250
             +     Y  ++A  VMA
Sbjct:   240 TYQNAKYTFVKARYVMA 256

GO:0020011 "apicoplast" evidence=ISS

TIGR_CMR|SPO_0886 SPO_0886 "chaperonin, 10 kDa" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 39/94 (41%), Positives = 60/94 (63%)

Query:    60 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVP 119
             ++KPL DRVLV+    EEKT GG+ +P +A+ KP  G VVA GEG      +L       
Sbjct:     2 ALKPLHDRVLVRRTESEEKTAGGLIIPDSAKEKPSEGVVVACGEGARKDSGELIAMAVKS 61

Query:   120 GTQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
             G +V++ K++GTE+  +G   L+++E D++GI+E
Sbjct:    62 GDRVLFGKWSGTEVTVDGEELLMMKESDIMGIIE 95

GO:0006457 "protein folding" evidence=ISS

GO:0051087 "chaperone binding" evidence=ISS

TIGR_CMR|DET_1427 DET_1427 "chaperonin GroES" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 34/90 (37%), Positives = 63/90 (70%)

Query:   161 KPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGN 220
             +PL++ V I+  E ++ + GG+++ +A++EK   G+++AVGPG LD++G R+ +SI  G+
Sbjct:     6 EPLHNMVLIQPQEKQDMSKGGIIIPDAAQEKSQEGVIVAVGPGRLDKDGKRELMSIKVGD 65

Query:   221 TVMYSKYAGNDFKGSDGTNYIALRASEVMA 250
              V++ K+ G + K S G +YI +  S++MA
Sbjct:    66 KVLFPKFGGVELK-SGGIDYIIMPESQIMA 94

GO:0006457 "protein folding" evidence=ISS

GO:0051087 "chaperone binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O65282	CH10C_ARATH	No assigned EC number	0.7519	0.9960	0.9960	yes	no
Q02073	CH10C_SPIOL	No assigned EC number	0.6147	0.9920	0.9843	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_280199	SubName- Full=Putative uncharacterized protein; (256 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_660263	hypothetical protein (588 aa)	•		•	•			•		0.487
	estExt_fgenesh4_pm.C_LG_IX0706	SubName- Full=Putative uncharacterized protein; (587 aa)	•		•	•			•		0.487
	estExt_fgenesh4_pm.C_LG_I0166	SubName- Full=Putative uncharacterized protein; (575 aa)	•		•	•			•		0.487
	estExt_fgenesh4_pg.C_LG_II2507	hypothetical protein (575 aa)	•		•	•			•		0.484
	estExt_Genewise1_v1.C_LG_III2625	hypothetical protein (607 aa)	•		•	•			•		0.480
	fgenesh4_pm.C_LG_I000009	SubName- Full=Putative uncharacterized protein; (607 aa)	•		•	•			•		0.478
	gw1.XV.2796.1	annotation not avaliable (541 aa)	•		•	•			•		0.427
	fgenesh4_pm.C_LG_X000536	hypothetical protein (475 aa)	•		•	•			•		0.401

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	253
PRK00364	95	PRK00364, groES, co-chaperonin GroES; Reviewed	2e-34
smart00883	93	smart00883, Cpn10, Chaperonin 10 Kd subunit	5e-34
PRK00364	95	PRK00364, groES, co-chaperonin GroES; Reviewed	6e-33
smart00883	93	smart00883, Cpn10, Chaperonin 10 Kd subunit	1e-32
cd00320	93	cd00320, cpn10, Chaperonin 10 Kd subunit (cpn10 or	4e-31
COG0234	96	COG0234, GroS, Co-chaperonin GroES (HSP10) [Posttr	1e-30
cd00320	93	cd00320, cpn10, Chaperonin 10 Kd subunit (cpn10 or	2e-30
COG0234	96	COG0234, GroS, Co-chaperonin GroES (HSP10) [Posttr	2e-30
pfam00166	91	pfam00166, Cpn10, Chaperonin 10 Kd subunit	6e-30
pfam00166	91	pfam00166, Cpn10, Chaperonin 10 Kd subunit	3e-27
PRK14533	91	PRK14533, groES, co-chaperonin GroES; Provisional	7e-18
PRK14533	91	PRK14533, groES, co-chaperonin GroES; Provisional	2e-10
PTZ00414	100	PTZ00414, PTZ00414, 10 kDa heat shock protein; Pro	8e-07
PTZ00414	100	PTZ00414, PTZ00414, 10 kDa heat shock protein; Pro	0.002

>gnl|CDD|178988 PRK00364, groES, co-chaperonin GroES; Reviewed

 Score =  119 bits (300), Expect = 2e-34
 Identities = 51/95 (53%), Positives = 69/95 (72%), Gaps = 2/95 (2%)

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKV 118
           ++KPLGDRVLVK    EEKT GGI LP +A+ KPQ GEVVAVG G+ +   +   + VKV
Sbjct: 2   NLKPLGDRVLVKRLEEEEKTAGGIVLPDSAKEKPQEGEVVAVGPGRRLDNGERVPLDVKV 61

Query: 119 PGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
            G +V++ KYAGTE++ +G  +LILRE D++ I+E
Sbjct: 62  -GDKVLFGKYAGTEVKIDGEEYLILRESDILAIVE 95

Length = 95

>gnl|CDD|197951 smart00883, Cpn10, Chaperonin 10 Kd subunit

 Score =  117 bits (297), Expect = 5e-34
 Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 2/94 (2%)

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKV 118
            IKPLGDRVLVK    EEKT GGI +P  A+ KPQ GEVVAVG GK +   +   + VKV
Sbjct: 1   KIKPLGDRVLVKRIEEEEKTAGGIVIPDTAKEKPQEGEVVAVGPGKRLENGERVPLDVKV 60

Query: 119 PGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 152
            G +V++ KYAGTE++ +G  +LILRE D++ ++
Sbjct: 61  -GDKVLFGKYAGTEVKLDGEEYLILRESDILAVI 93

The chaperonins are 'helper' molecules required for correct folding and subsequent assembly of some proteins. These are required for normal cell growth, and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions. Type I chaperonins present in eubacteria, mitochondria and chloroplasts require the concerted action of 2 proteins, chaperonin 60 (cpn60) and chaperonin 10 (cpn10). The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between six to eight identical subunits, while the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The central cavity of the cylindrical cpn60 tetradecamer provides as isolated environment for protein folding whilst cpn-10 binds to cpn-60 and synchronizes the release of the folded protein in an Mg2+-ATP dependent manner. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. Length = 93

>gnl|CDD|178988 PRK00364, groES, co-chaperonin GroES; Reviewed

 Score =  115 bits (290), Expect = 6e-33
 Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 1/93 (1%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           LKPL DRV +K  E EE TAGG++L +++KEKP  G V+AVGPG   + G R PL +  G
Sbjct: 3   LKPLGDRVLVKRLEEEEKTAGGIVLPDSAKEKPQEGEVVAVGPGRRLDNGERVPLDVKVG 62

Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
           + V++ KYAG + K  DG  Y+ LR S+++A++
Sbjct: 63  DKVLFGKYAGTEVK-IDGEEYLILRESDILAIV 94

Length = 95

>gnl|CDD|197951 smart00883, Cpn10, Chaperonin 10 Kd subunit

 Score =  114 bits (287), Expect = 1e-32
 Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 1/93 (1%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           +KPL DRV +K  E EE TAGG+++ + +KEKP  G V+AVGPG   E G R PL +  G
Sbjct: 2   IKPLGDRVLVKRIEEEEKTAGGIVIPDTAKEKPQEGEVVAVGPGKRLENGERVPLDVKVG 61

Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
           + V++ KYAG + K  DG  Y+ LR S+++AV+
Sbjct: 62  DKVLFGKYAGTEVK-LDGEEYLILRESDILAVI 93

The chaperonins are 'helper' molecules required for correct folding and subsequent assembly of some proteins. These are required for normal cell growth, and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions. Type I chaperonins present in eubacteria, mitochondria and chloroplasts require the concerted action of 2 proteins, chaperonin 60 (cpn60) and chaperonin 10 (cpn10). The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between six to eight identical subunits, while the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The central cavity of the cylindrical cpn60 tetradecamer provides as isolated environment for protein folding whilst cpn-10 binds to cpn-60 and synchronizes the release of the folded protein in an Mg2+-ATP dependent manner. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. Length = 93

>gnl|CDD|238197 cd00320, cpn10, Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts

 Score =  110 bits (277), Expect = 4e-31
 Identities = 47/93 (50%), Positives = 66/93 (70%), Gaps = 1/93 (1%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           +KPL DRV +K  EAEE T GG++L +++KEKP  G V+AVGPG  +E G R PLS+  G
Sbjct: 2   IKPLGDRVLVKRIEAEEKTKGGIILPDSAKEKPQEGKVVAVGPGRRNENGERVPLSVKVG 61

Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
           + V++ KYAG + K  DG  Y+ LR S+++AV+
Sbjct: 62  DKVLFPKYAGTEVK-LDGEEYLILRESDILAVI 93

It forms heptameric rings with a dome-like structure, forming a lid to the large cavity of the tetradecameric cpn60 cylinder and thereby tightly regulating release and binding of proteins to the cpn60 surface. Length = 93

>gnl|CDD|223312 COG0234, GroS, Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones]

 Score =  109 bits (274), Expect = 1e-30
 Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 2/95 (2%)

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKV 118
            IKPLGDRVLVK    EEKT GGI LP +A+ KPQ GEVVAVG G+     +L  + VKV
Sbjct: 2   KIKPLGDRVLVKRVEEEEKTAGGIVLPDSAKEKPQEGEVVAVGPGRRDENGELVPLDVKV 61

Query: 119 PGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
            G +V++ KYAGTE++ +G  +LIL E D++ I+E
Sbjct: 62  -GDRVLFGKYAGTEVKIDGEEYLILSESDILAIVE 95

Length = 96

>gnl|CDD|238197 cd00320, cpn10, Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts

 Score =  108 bits (273), Expect = 2e-30
 Identities = 50/94 (53%), Positives = 67/94 (71%), Gaps = 2/94 (2%)

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKV 118
            IKPLGDRVLVK    EEKT GGI LP +A+ KPQ G+VVAVG G+     +   +SVKV
Sbjct: 1   KIKPLGDRVLVKRIEAEEKTKGGIILPDSAKEKPQEGKVVAVGPGRRNENGERVPLSVKV 60

Query: 119 PGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 152
            G +V++ KYAGTE++ +G  +LILRE D++ ++
Sbjct: 61  -GDKVLFPKYAGTEVKLDGEEYLILRESDILAVI 93

It forms heptameric rings with a dome-like structure, forming a lid to the large cavity of the tetradecameric cpn60 cylinder and thereby tightly regulating release and binding of proteins to the cpn60 surface. Length = 93

>gnl|CDD|223312 COG0234, GroS, Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones]

 Score =  108 bits (273), Expect = 2e-30
 Identities = 44/93 (47%), Positives = 63/93 (67%), Gaps = 1/93 (1%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           +KPL DRV +K  E EE TAGG++L +++KEKP  G V+AVGPG  DE G   PL +  G
Sbjct: 3   IKPLGDRVLVKRVEEEEKTAGGIVLPDSAKEKPQEGEVVAVGPGRRDENGELVPLDVKVG 62

Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
           + V++ KYAG + K  DG  Y+ L  S+++A++
Sbjct: 63  DRVLFGKYAGTEVKI-DGEEYLILSESDILAIV 94

Length = 96

>gnl|CDD|201050 pfam00166, Cpn10, Chaperonin 10 Kd subunit

 Score =  107 bits (269), Expect = 6e-30
 Identities = 48/92 (52%), Positives = 65/92 (70%), Gaps = 1/92 (1%)

Query: 61  IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPG 120
           IKPLGDRVLVK +  EEKT GGI LP +A+ KP  GEVVAVG G       + + VKV G
Sbjct: 1   IKPLGDRVLVKREEAEEKTKGGIILPDSAKEKPNQGEVVAVGPGARNNGEDVPLEVKV-G 59

Query: 121 TQVIYSKYAGTELEFNGANHLILREDDVVGIL 152
            +V++ KYAGTE++ +G  +LIL+E D++ ++
Sbjct: 60  DKVLFPKYAGTEVKIDGEEYLILKEKDILAVI 91

This family contains GroES and Gp31-like chaperonins. Gp31 is a functional co-chaperonin that is required for the folding and assembly of Gp23, a major capsid protein, during phage morphogenesis. Length = 91

>gnl|CDD|201050 pfam00166, Cpn10, Chaperonin 10 Kd subunit

 Score =  100 bits (251), Expect = 3e-27
 Identities = 42/93 (45%), Positives = 63/93 (67%), Gaps = 2/93 (2%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           +KPL DRV +K  EAEE T GG++L +++KEKP+ G V+AVGPG  +  G   PL +  G
Sbjct: 1   IKPLGDRVLVKREEAEEKTKGGIILPDSAKEKPNQGEVVAVGPGARN-NGEDVPLEVKVG 59

Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
           + V++ KYAG + K  DG  Y+ L+  +++AV+
Sbjct: 60  DKVLFPKYAGTEVK-IDGEEYLILKEKDILAVI 91

This family contains GroES and Gp31-like chaperonins. Gp31 is a functional co-chaperonin that is required for the folding and assembly of Gp23, a major capsid protein, during phage morphogenesis. Length = 91

>gnl|CDD|184730 PRK14533, groES, co-chaperonin GroES; Provisional

 Score = 75.7 bits (186), Expect = 7e-18
 Identities = 39/93 (41%), Positives = 62/93 (66%), Gaps = 5/93 (5%)

Query: 61  IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPG 120
           + PLG+R+L+K    E+KT+GGI LP +A+ KP   EVVAVG+         D  +KV G
Sbjct: 3   VIPLGERLLIKPIKEEKKTEGGIVLPDSAKEKPMKAEVVAVGKLDDEE----DFDIKV-G 57

Query: 121 TQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
            +VI+SKYAGTE++ +  +++I+  +D++  +E
Sbjct: 58  DKVIFSKYAGTEIKIDDEDYIIIDVNDILAKIE 90

Length = 91

>gnl|CDD|184730 PRK14533, groES, co-chaperonin GroES; Provisional

 Score = 55.6 bits (134), Expect = 2e-10
 Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 6/91 (6%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           + PL +R+ IK  + E+ T GG++L +++KEKP    V+AVG    +E+       I  G
Sbjct: 3   VIPLGERLLIKPIKEEKKTEGGIVLPDSAKEKPMKAEVVAVGKLDDEED-----FDIKVG 57

Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMA 250
           + V++SKYAG + K  D  +YI +  ++++A
Sbjct: 58  DKVIFSKYAGTEIKIDD-EDYIIIDVNDILA 87

Length = 91

>gnl|CDD|173604 PTZ00414, PTZ00414, 10 kDa heat shock protein; Provisional

 Score = 46.1 bits (109), Expect = 8e-07
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 5/101 (4%)

Query: 53  VVAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL 112
              P    ++PLG RVLVK     ++T  G+ +P     K   G VVAV           
Sbjct: 4   FTVPALKKLQPLGQRVLVKRTLAAKQTKAGVLIPEQVAGKVNEGTVVAVAAATK----DW 59

Query: 113 DISVKVPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
             +VKV G  V+  ++ G+ ++  G    +  ED ++G+L+
Sbjct: 60  TPTVKV-GDTVLLPEFGGSSVKVEGEEFFLYNEDSLLGVLQ 99

Length = 100

>gnl|CDD|173604 PTZ00414, PTZ00414, 10 kDa heat shock protein; Provisional

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 157 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSI 216
           +K L+PL  RV +K   A + T  G+L+ E    K + G V+AV     D        ++
Sbjct: 9   LKKLQPLGQRVLVKRTLAAKQTKAGVLIPEQVAGKVNEGTVVAVAAATKDWTP-----TV 63

Query: 217 APGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 253
             G+TV+  ++ G+  K  +G  +       ++ VL 
Sbjct: 64  KVGDTVLLPEFGGSSVK-VEGEEFFLYNEDSLLGVLQ 99

Length = 100

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	253
COG0234	96	GroS Co-chaperonin GroES (HSP10) [Posttranslationa	100.0
COG0234	96	GroS Co-chaperonin GroES (HSP10) [Posttranslationa	100.0
PRK00364	95	groES co-chaperonin GroES; Reviewed	100.0
PTZ00414	100	10 kDa heat shock protein; Provisional	100.0
PTZ00414	100	10 kDa heat shock protein; Provisional	100.0
PRK00364	95	groES co-chaperonin GroES; Reviewed	100.0
cd00320	93	cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); C	99.98
PRK14533	91	groES co-chaperonin GroES; Provisional	99.97
PRK14533	91	groES co-chaperonin GroES; Provisional	99.97
cd00320	93	cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); C	99.97
PF00166	93	Cpn10: Chaperonin 10 Kd subunit; InterPro: IPR0208	99.97
KOG1641	104	consensus Mitochondrial chaperonin [Posttranslatio	99.97
PF00166	93	Cpn10: Chaperonin 10 Kd subunit; InterPro: IPR0208	99.96
KOG1641	104	consensus Mitochondrial chaperonin [Posttranslatio	99.95

>COG0234 GroS Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=5.4e-36  Score=234.85  Aligned_cols=95  Identities=46%  Similarity=0.844  Sum_probs=92.4

Q ss_pred             ceeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCCCeEEEecCC
Q 025388          158 KDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDG  237 (253)
Q Consensus       158 ~~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kyaG~ev~~~dg  237 (253)
                      ++|+||+|||||++.|+|++|+|||+||++|+|||+.|+|+|||+|..+++|++.|++||+||+|+|++|+|++++. ||
T Consensus         1 m~ikPL~DRVlVk~~e~EekT~gGIvlpdsakeK~~~g~VvAVG~G~~~~~g~~~~~~VkvGD~Vlf~ky~G~evk~-dg   79 (96)
T COG0234           1 MKIKPLGDRVLVKRVEEEEKTAGGIVLPDSAKEKPQEGEVVAVGPGRRDENGELVPLDVKVGDRVLFGKYAGTEVKI-DG   79 (96)
T ss_pred             CCceecCCEEEEEEchhhccccCcEEecCccccCCcceEEEEEccceecCCCCEeccccccCCEEEECccCCcEEEE-CC
Confidence            46999999999999999999999999999999999999999999999999999999999999999999999999995 99


Q ss_pred             eEEEEEeCCceEEEeC
Q 025388          238 TNYIALRASEVMAVLS  253 (253)
Q Consensus       238 ~~y~vlr~~DIlAvi~  253 (253)
                      ++|++++++||||+++
T Consensus        80 eeylil~e~DILAiv~   95 (96)
T COG0234          80 EEYLILSESDILAIVE   95 (96)
T ss_pred             EEEEEechHHeeEEec
Confidence            9999999999999985

>COG0234 GroS Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2.4e-35  Score=231.16  Aligned_cols=94  Identities=54%  Similarity=0.862  Sum_probs=90.3

Q ss_pred             eeceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCC-eeeeeeeeCCcEEEeccCCceEEEEcC
Q 025388           59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKVPGTQVIYSKYAGTELEFNG  137 (253)
Q Consensus        59 ~~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~-~~p~~Vkv~GD~Vl~~ky~G~ev~~~g  137 (253)
                      |+|+||+|||||++.++|++|+|||+||++|++||+.|+|+|||+|..++++ .+|++||+ ||+|+|++|+|+++++||
T Consensus         1 m~ikPL~DRVlVk~~e~EekT~gGIvlpdsakeK~~~g~VvAVG~G~~~~~g~~~~~~Vkv-GD~Vlf~ky~G~evk~dg   79 (96)
T COG0234           1 MKIKPLGDRVLVKRVEEEEKTAGGIVLPDSAKEKPQEGEVVAVGPGRRDENGELVPLDVKV-GDRVLFGKYAGTEVKIDG   79 (96)
T ss_pred             CCceecCCEEEEEEchhhccccCcEEecCccccCCcceEEEEEccceecCCCCEecccccc-CCEEEECccCCcEEEECC
Confidence            5799999999999999999999999999999999999999999999988775 58999999 999999999999999999


Q ss_pred             eeeeEEeecceeeeec
Q 025388          138 ANHLILREDDVVGILE  153 (253)
Q Consensus       138 ~~~~llre~DIlaii~  153 (253)
                      ++|++|+++||||+++
T Consensus        80 eeylil~e~DILAiv~   95 (96)
T COG0234          80 EEYLILSESDILAIVE   95 (96)
T ss_pred             EEEEEechHHeeEEec
Confidence            9999999999999986

>PRK00364 groES co-chaperonin GroES; Reviewed

Probab=100.00  E-value=8.2e-34  Score=222.99  Aligned_cols=94  Identities=48%  Similarity=0.873  Sum_probs=91.8

Q ss_pred             eeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCCCeEEEecCCe
Q 025388          159 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGT  238 (253)
Q Consensus       159 ~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kyaG~ev~~~dg~  238 (253)
                      +|+||+|||||++.+++++|+|||+||+++++|+++|+|+|||||+++++|++.|++||+||+|+|++|+|++|++ ||+
T Consensus         2 ~i~Pl~drVLV~~~~~e~~T~gGI~Lp~~a~~k~~~G~VvaVG~G~~~~~G~~~~~~vk~GD~Vlf~~~~g~ev~~-~~~   80 (95)
T PRK00364          2 NLKPLGDRVLVKRLEEEEKTAGGIVLPDSAKEKPQEGEVVAVGPGRRLDNGERVPLDVKVGDKVLFGKYAGTEVKI-DGE   80 (95)
T ss_pred             cceEcCCEEEEEEcccCccccceEEcCccccCCcceEEEEEECCCeECCCCCEeecccCCCCEEEEcCCCCeEEEE-CCE
Confidence            5999999999999999999999999999999999999999999999999999999999999999999999999997 899


Q ss_pred             EEEEEeCCceEEEeC
Q 025388          239 NYIALRASEVMAVLS  253 (253)
Q Consensus       239 ~y~vlr~~DIlAvi~  253 (253)
                      +|+++|++||||+++
T Consensus        81 ~y~iv~~~DIlavi~   95 (95)
T PRK00364         81 EYLILRESDILAIVE   95 (95)
T ss_pred             EEEEEEHHHEEEEeC
Confidence            999999999999986

>PTZ00414 10 kDa heat shock protein; Provisional

Probab=100.00  E-value=1.5e-33  Score=223.70  Aligned_cols=96  Identities=27%  Similarity=0.490  Sum_probs=90.1

Q ss_pred             eccCccceeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCCCeE
Q 025388          152 LETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND  231 (253)
Q Consensus       152 i~t~~~~~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kyaG~e  231 (253)
                      +.+.++++|+||+||||||+.++|++|+|||+||+++++||++|+|+|||+|..+     .|++||+||+|+|++|+|++
T Consensus         4 ~~~~~~~~ikPL~dRVLVk~~~~e~kT~gGIiLP~sakekp~~g~VvAVG~G~~~-----~~~~Vk~GD~Vl~~~y~Gte   78 (100)
T PTZ00414          4 FTVPALKKLQPLGQRVLVKRTLAAKQTKAGVLIPEQVAGKVNEGTVVAVAAATKD-----WTPTVKVGDTVLLPEFGGSS   78 (100)
T ss_pred             ccccccccceecCCEEEEEEcccccccccCEEcccccccCCceeEEEEECCCCcc-----ccceecCCCEEEEcCCCCcE
Confidence            4567788999999999999999999999999999999999999999999999754     38899999999999999999


Q ss_pred             EEecCCeEEEEEeCCceEEEeC
Q 025388          232 FKGSDGTNYIALRASEVMAVLS  253 (253)
Q Consensus       232 v~~~dg~~y~vlr~~DIlAvi~  253 (253)
                      |++ ||++|+++|++||||+++
T Consensus        79 vk~-dg~ey~i~~e~DILavi~   99 (100)
T PTZ00414         79 VKV-EGEEFFLYNEDSLLGVLQ   99 (100)
T ss_pred             EEE-CCEEEEEEEhHHEEEEec
Confidence            996 999999999999999986

>PTZ00414 10 kDa heat shock protein; Provisional

Probab=100.00  E-value=1.2e-33  Score=224.20  Aligned_cols=94  Identities=31%  Similarity=0.616  Sum_probs=88.5

Q ss_pred             cccceeceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCCeeeeeeeeCCcEEEeccCCceEEE
Q 025388           55 APKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPGTQVIYSKYAGTELE  134 (253)
Q Consensus        55 ~~~~~~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~~~p~~Vkv~GD~Vl~~ky~G~ev~  134 (253)
                      ++++++|+||+||||||+.++|++|+|||+||+++++||++|+|+|||+|+.+    .|++||+ ||+|+|++|+|++|+
T Consensus         6 ~~~~~~ikPL~dRVLVk~~~~e~kT~gGIiLP~sakekp~~g~VvAVG~G~~~----~~~~Vk~-GD~Vl~~~y~Gtevk   80 (100)
T PTZ00414          6 VPALKKLQPLGQRVLVKRTLAAKQTKAGVLIPEQVAGKVNEGTVVAVAAATKD----WTPTVKV-GDTVLLPEFGGSSVK   80 (100)
T ss_pred             ccccccceecCCEEEEEEcccccccccCEEcccccccCCceeEEEEECCCCcc----ccceecC-CCEEEEcCCCCcEEE
Confidence            34678899999999999999999999999999999999999999999999743    4889999 999999999999999


Q ss_pred             EcCeeeeEEeecceeeeec
Q 025388          135 FNGANHLILREDDVVGILE  153 (253)
Q Consensus       135 ~~g~~~~llre~DIlaii~  153 (253)
                      ++|++|++++|+||||+++
T Consensus        81 ~dg~ey~i~~e~DILavi~   99 (100)
T PTZ00414         81 VEGEEFFLYNEDSLLGVLQ   99 (100)
T ss_pred             ECCEEEEEEEhHHEEEEec
Confidence            9999999999999999986

>PRK00364 groES co-chaperonin GroES; Reviewed

Probab=100.00  E-value=8.3e-33  Score=217.28  Aligned_cols=94  Identities=54%  Similarity=0.914  Sum_probs=89.4

Q ss_pred             eeceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCC-eeeeeeeeCCcEEEeccCCceEEEEcC
Q 025388           59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKVPGTQVIYSKYAGTELEFNG  137 (253)
Q Consensus        59 ~~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~-~~p~~Vkv~GD~Vl~~ky~G~ev~~~g  137 (253)
                      ++|+||+|||||++.+++++|+|||+||+++++|++.|+|+|||||+.++++ .+|++||+ ||+|+|++|+|++|+++|
T Consensus         1 ~~i~Pl~drVLV~~~~~e~~T~gGI~Lp~~a~~k~~~G~VvaVG~G~~~~~G~~~~~~vk~-GD~Vlf~~~~g~ev~~~~   79 (95)
T PRK00364          1 MNLKPLGDRVLVKRLEEEEKTAGGIVLPDSAKEKPQEGEVVAVGPGRRLDNGERVPLDVKV-GDKVLFGKYAGTEVKIDG   79 (95)
T ss_pred             CcceEcCCEEEEEEcccCccccceEEcCccccCCcceEEEEEECCCeECCCCCEeecccCC-CCEEEEcCCCCeEEEECC
Confidence            4699999999999999999999999999999999999999999999987765 47999999 999999999999999999


Q ss_pred             eeeeEEeecceeeeec
Q 025388          138 ANHLILREDDVVGILE  153 (253)
Q Consensus       138 ~~~~llre~DIlaii~  153 (253)
                      ++|++++++||||+++
T Consensus        80 ~~y~iv~~~DIlavi~   95 (95)
T PRK00364         80 EEYLILRESDILAIVE   95 (95)
T ss_pred             EEEEEEEHHHEEEEeC
Confidence            9999999999999985

>cd00320 cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts

Probab=99.98  E-value=1.4e-32  Score=215.16  Aligned_cols=93  Identities=51%  Similarity=0.913  Sum_probs=90.5

Q ss_pred             eeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCCCeEEEecCCe
Q 025388          159 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGT  238 (253)
Q Consensus       159 ~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kyaG~ev~~~dg~  238 (253)
                      +|+||+|||||++.++|++|+|||+||+++++|+++|+|+|||||+++++|++.|++|++||+|+|++|+|++|++ ||+
T Consensus         1 ~i~Pl~DrVLV~~~~~e~~T~~GI~Lp~~~~~k~~~g~VvAVG~g~~~~~g~~~~~~vk~GD~Vl~~~~~g~~v~~-~~~   79 (93)
T cd00320           1 KIKPLGDRVLVKRIEAEEKTKGGIILPDSAKEKPQEGKVVAVGPGRRNENGERVPLSVKVGDKVLFPKYAGTEVKL-DGE   79 (93)
T ss_pred             CceecCCEEEEEEccccceecceEEeCCCcCCCceEEEEEEECCCeECCCCCCccccccCCCEEEECCCCceEEEE-CCE
Confidence            4899999999999999999999999999999999999999999999999999999999999999999999999996 899


Q ss_pred             EEEEEeCCceEEEe
Q 025388          239 NYIALRASEVMAVL  252 (253)
Q Consensus       239 ~y~vlr~~DIlAvi  252 (253)
                      +|+++|++||||++
T Consensus        80 ~y~i~~~~DIla~i   93 (93)
T cd00320          80 EYLILRESDILAVI   93 (93)
T ss_pred             EEEEEEHHHEEEEC
Confidence            99999999999986

It forms heptameric rings with a dome-like structure, forming a lid to the large cavity of the tetradecameric cpn60 cylinder and thereby tightly regulating release and binding of proteins to the cpn60 surface.

>PRK14533 groES co-chaperonin GroES; Provisional

Probab=99.97  E-value=2.4e-32  Score=213.53  Aligned_cols=90  Identities=43%  Similarity=0.754  Sum_probs=85.5

Q ss_pred             eeceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCCeeeeeeeeCCcEEEeccCCceEEEEcCe
Q 025388           59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVPGTQVIYSKYAGTELEFNGA  138 (253)
Q Consensus        59 ~~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~~~p~~Vkv~GD~Vl~~ky~G~ev~~~g~  138 (253)
                      ++|+||+|||||++.+++++|+|||+||+++++|++.|+|+|||+|..    ..|++||+ ||+|+|++|+|++|+++|+
T Consensus         1 ~~i~Pl~DRVLVk~~~~e~~T~gGI~Lp~~a~ek~~~G~VvavG~g~~----~~~~~Vk~-GD~Vl~~~y~g~ev~~~~~   75 (91)
T PRK14533          1 MKVIPLGERLLIKPIKEEKKTEGGIVLPDSAKEKPMKAEVVAVGKLDD----EEDFDIKV-GDKVIFSKYAGTEIKIDDE   75 (91)
T ss_pred             CCceEcCCEEEEEEccccceecccEEecccccCCcceEEEEEECCCCc----cccccccC-CCEEEEccCCCeEEEECCE
Confidence            479999999999999999999999999999999999999999999852    45899999 9999999999999999999


Q ss_pred             eeeEEeecceeeeec
Q 025388          139 NHLILREDDVVGILE  153 (253)
Q Consensus       139 ~~~llre~DIlaii~  153 (253)
                      +|++++++||||+++
T Consensus        76 ~y~iv~e~DILa~i~   90 (91)
T PRK14533         76 DYIIIDVNDILAKIE   90 (91)
T ss_pred             EEEEEEhHhEEEEee
Confidence            999999999999986

>PRK14533 groES co-chaperonin GroES; Provisional

Probab=99.97  E-value=5.6e-32  Score=211.43  Aligned_cols=89  Identities=35%  Similarity=0.634  Sum_probs=84.5

Q ss_pred             eeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCCCeEEEecCCe
Q 025388          159 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGT  238 (253)
Q Consensus       159 ~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kyaG~ev~~~dg~  238 (253)
                      +|+||+|||||++.+++++|+|||+||+++++|++.|+|+|||||..     ..|++||+||+|+|++|+|++|++ ||+
T Consensus         2 ~i~Pl~DRVLVk~~~~e~~T~gGI~Lp~~a~ek~~~G~VvavG~g~~-----~~~~~Vk~GD~Vl~~~y~g~ev~~-~~~   75 (91)
T PRK14533          2 KVIPLGERLLIKPIKEEKKTEGGIVLPDSAKEKPMKAEVVAVGKLDD-----EEDFDIKVGDKVIFSKYAGTEIKI-DDE   75 (91)
T ss_pred             CceEcCCEEEEEEccccceecccEEecccccCCcceEEEEEECCCCc-----cccccccCCCEEEEccCCCeEEEE-CCE
Confidence            69999999999999999999999999999999999999999999862     558999999999999999999997 899


Q ss_pred             EEEEEeCCceEEEeC
Q 025388          239 NYIALRASEVMAVLS  253 (253)
Q Consensus       239 ~y~vlr~~DIlAvi~  253 (253)
                      +|+++|++||||+++
T Consensus        76 ~y~iv~e~DILa~i~   90 (91)
T PRK14533         76 DYIIIDVNDILAKIE   90 (91)
T ss_pred             EEEEEEhHhEEEEee
Confidence            999999999999985

>cd00320 cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts

Probab=99.97  E-value=1.4e-31  Score=209.50  Aligned_cols=92  Identities=54%  Similarity=0.916  Sum_probs=87.9

Q ss_pred             eceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCCe-eeeeeeeCCcEEEeccCCceEEEEcCe
Q 025388           60 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKVPGTQVIYSKYAGTELEFNGA  138 (253)
Q Consensus        60 ~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~~-~p~~Vkv~GD~Vl~~ky~G~ev~~~g~  138 (253)
                      +|+||+|||||++.++|++|+|||+||++++++++.|+|+|||||+.++++. +|++||+ ||+|+|++|+|++|+++|+
T Consensus         1 ~i~Pl~DrVLV~~~~~e~~T~~GI~Lp~~~~~k~~~g~VvAVG~g~~~~~g~~~~~~vk~-GD~Vl~~~~~g~~v~~~~~   79 (93)
T cd00320           1 KIKPLGDRVLVKRIEAEEKTKGGIILPDSAKEKPQEGKVVAVGPGRRNENGERVPLSVKV-GDKVLFPKYAGTEVKLDGE   79 (93)
T ss_pred             CceecCCEEEEEEccccceecceEEeCCCcCCCceEEEEEEECCCeECCCCCCccccccC-CCEEEECCCCceEEEECCE
Confidence            4899999999999999999999999999999999999999999999877764 7999999 9999999999999999999


Q ss_pred             eeeEEeecceeeee
Q 025388          139 NHLILREDDVVGIL  152 (253)
Q Consensus       139 ~~~llre~DIlaii  152 (253)
                      +|+|++++||||++
T Consensus        80 ~y~i~~~~DIla~i   93 (93)
T cd00320          80 EYLILRESDILAVI   93 (93)
T ss_pred             EEEEEEHHHEEEEC
Confidence            99999999999985

It forms heptameric rings with a dome-like structure, forming a lid to the large cavity of the tetradecameric cpn60 cylinder and thereby tightly regulating release and binding of proteins to the cpn60 surface.

>PF00166 Cpn10: Chaperonin 10 Kd subunit; InterPro: IPR020818 The chaperonins are `helper' molecules required for correct folding and subsequent assembly of some proteins []

Probab=99.97  E-value=1.2e-30  Score=203.67  Aligned_cols=93  Identities=46%  Similarity=0.876  Sum_probs=87.4

Q ss_pred             eeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCCCeEEEecCCe
Q 025388          159 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGT  238 (253)
Q Consensus       159 ~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kyaG~ev~~~dg~  238 (253)
                      +|+||+|||||++.+++++|+|||+||+++++++++|+|||||+|+++++|+..|+.|++||+|+|++|+|+++++ ||+
T Consensus         1 ki~Pl~drVLV~~~~~e~~T~~GiiLp~~~~~~~~~G~VvaVG~G~~~~~g~~~~~~vk~GD~Vl~~~~~g~~v~~-~~~   79 (93)
T PF00166_consen    1 KIKPLGDRVLVKKIEAEEKTASGIILPESAKEKPNQGKVVAVGPGRYNENGEEVPMDVKVGDKVLFPKYAGTEVKF-DGE   79 (93)
T ss_dssp             EEEESTTEEEEEECSCTCTCTTSCCE-CCSSSSEEEEEEEEE-SEEETTTSSEEETSS-TTSEEEEETTTSEEEEE-TTE
T ss_pred             CceecCCEEEEEEccccceecceEEeccccccccceeEEEEcCCccccCCCcEeeeeeeeccEEeccccCceEEEE-CCE
Confidence            5899999999999999999999999999999999999999999999999999999999999999999999999997 899


Q ss_pred             EEEEEeCCceEEEe
Q 025388          239 NYIALRASEVMAVL  252 (253)
Q Consensus       239 ~y~vlr~~DIlAvi  252 (253)
                      +|+++|++||||++
T Consensus        80 ~~~~~~~~dIlavi   93 (93)
T PF00166_consen   80 KYLIVREDDILAVI   93 (93)
T ss_dssp             EEEEEEGGGEEEEE
T ss_pred             EEEEEEHHHeEEEC
Confidence            99999999999986

These are required for normal cell growth [], and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions. Type I chaperonins present in eubacteria, mitochondria and chloroplasts require the concerted action of 2 proteins, chaperonin 60 (cpn60) and chaperonin 10 (cpn10) []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between six to eight identical subunits, while the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The central cavity of the cylindrical cpn60 tetradecamer provides as isolated environment for protein folding whilst cpn-10 binds to cpn-60 and synchronizes the release of the folded protein in an Mg2+-ATP dependent manner []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. Escherichia coli GroES has also been shown to bind ATP cooperatively, and with an affinity comparable to that of GroEL []. Each GroEL subunit contains three structurally distinct domains: an apical, an intermediate and an equatorial domain. The apical domain contains the binding sites for both GroES and the unfolded protein substrate. The equatorial domain contains the ATP-binding site and most of the oligomeric contacts. The intermediate domain links the apical and equatorial domains and transfers allosteric information between them. The GroEL oligomer is a tetradecamer, cylindrically shaped, that is organised in two heptameric rings stacked back to back. Each GroEL ring contains a central cavity, known as the `Anfinsen cage', that provides an isolated environment for protein folding. The identical 10 kDa subunits of GroES form a dome-like heptameric oligomer in solution. ATP binding to GroES may be important in charging the seven subunits of the interacting GroEL ring with ATP, to facilitate cooperative ATP binding and hydrolysis for substrate protein release.; GO: 0006457 protein folding, 0005737 cytoplasm; PDB: 1PF9_Q 1AON_P 1SX4_T 1SVT_R 2C7D_P 1PCQ_O 2C7C_Q 1GRU_Q 1WNR_F 1P3H_I ....

>KOG1641 consensus Mitochondrial chaperonin [Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=8.9e-31  Score=206.99  Aligned_cols=102  Identities=38%  Similarity=0.586  Sum_probs=96.6

Q ss_pred             eeccCccceeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCCCe
Q 025388          151 ILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGN  230 (253)
Q Consensus       151 ii~t~~~~~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kyaG~  230 (253)
                      +...+.++++.|+.|||||++.+++++|+|||+||+++++|.++|+|+|||||.++++|+.+|..|++||+|||++|+|+
T Consensus         2 ~~~~~~~kk~vPl~DRVLVqr~~a~~KT~gGilLPEks~~K~~~g~VvavGpG~~~~~G~~v~~~Vk~Gd~VLlpeygGt   81 (104)
T KOG1641|consen    2 ISTSWEIKKVVPLLDRVLVQRIEAPTKTAGGILLPEKSVGKLLQGTVVAVGPGSRDKGGEIVPVSVKVGDRVLLPEYGGT   81 (104)
T ss_pred             cchhhhhhhhccccceeeeeeeeccccccceeEeccccccccceEEEEEEcCccccCCCCCcCccccCCCEEEeeccCCc
Confidence            44567889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCeEEEEEeCCceEEEe
Q 025388          231 DFKGSDGTNYIALRASEVMAVL  252 (253)
Q Consensus       231 ev~~~dg~~y~vlr~~DIlAvi  252 (253)
                      +|++.|+++|+++|.+|+|+.+
T Consensus        82 ~V~l~~~~~~~~fr~e~~l~~~  103 (104)
T KOG1641|consen   82 KVKLGDEDEYHLFRDEDDLLAI  103 (104)
T ss_pred             EEeccCCceeEEecchhhhhhh
Confidence            9998767899999999999876

>PF00166 Cpn10: Chaperonin 10 Kd subunit; InterPro: IPR020818 The chaperonins are `helper' molecules required for correct folding and subsequent assembly of some proteins []

Probab=99.96  E-value=1.2e-29  Score=198.02  Aligned_cols=92  Identities=52%  Similarity=0.894  Sum_probs=84.8

Q ss_pred             eceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCCe-eeeeeeeCCcEEEeccCCceEEEEcCe
Q 025388           60 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKVPGTQVIYSKYAGTELEFNGA  138 (253)
Q Consensus        60 ~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~~-~p~~Vkv~GD~Vl~~ky~G~ev~~~g~  138 (253)
                      +|+||+|||||++.+++++|+|||+||++++++++.|+|||||+|+.+.++. +|++|++ ||+|+|++|+|+++++||+
T Consensus         1 ki~Pl~drVLV~~~~~e~~T~~GiiLp~~~~~~~~~G~VvaVG~G~~~~~g~~~~~~vk~-GD~Vl~~~~~g~~v~~~~~   79 (93)
T PF00166_consen    1 KIKPLGDRVLVKKIEAEEKTASGIILPESAKEKPNQGKVVAVGPGRYNENGEEVPMDVKV-GDKVLFPKYAGTEVKFDGE   79 (93)
T ss_dssp             EEEESTTEEEEEECSCTCTCTTSCCE-CCSSSSEEEEEEEEE-SEEETTTSSEEETSS-T-TSEEEEETTTSEEEEETTE
T ss_pred             CceecCCEEEEEEccccceecceEEeccccccccceeEEEEcCCccccCCCcEeeeeeee-ccEEeccccCceEEEECCE
Confidence            5899999999999999999999999999999999999999999999987664 7999999 9999999999999999999


Q ss_pred             eeeEEeecceeeee
Q 025388          139 NHLILREDDVVGIL  152 (253)
Q Consensus       139 ~~~llre~DIlaii  152 (253)
                      +|++++++||||++
T Consensus        80 ~~~~~~~~dIlavi   93 (93)
T PF00166_consen   80 KYLIVREDDILAVI   93 (93)
T ss_dssp             EEEEEEGGGEEEEE
T ss_pred             EEEEEEHHHeEEEC
Confidence            99999999999986

These are required for normal cell growth [], and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions. Type I chaperonins present in eubacteria, mitochondria and chloroplasts require the concerted action of 2 proteins, chaperonin 60 (cpn60) and chaperonin 10 (cpn10) []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between six to eight identical subunits, while the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The central cavity of the cylindrical cpn60 tetradecamer provides as isolated environment for protein folding whilst cpn-10 binds to cpn-60 and synchronizes the release of the folded protein in an Mg2+-ATP dependent manner []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. Escherichia coli GroES has also been shown to bind ATP cooperatively, and with an affinity comparable to that of GroEL []. Each GroEL subunit contains three structurally distinct domains: an apical, an intermediate and an equatorial domain. The apical domain contains the binding sites for both GroES and the unfolded protein substrate. The equatorial domain contains the ATP-binding site and most of the oligomeric contacts. The intermediate domain links the apical and equatorial domains and transfers allosteric information between them. The GroEL oligomer is a tetradecamer, cylindrically shaped, that is organised in two heptameric rings stacked back to back. Each GroEL ring contains a central cavity, known as the `Anfinsen cage', that provides an isolated environment for protein folding. The identical 10 kDa subunits of GroES form a dome-like heptameric oligomer in solution. ATP binding to GroES may be important in charging the seven subunits of the interacting GroEL ring with ATP, to facilitate cooperative ATP binding and hydrolysis for substrate protein release.; GO: 0006457 protein folding, 0005737 cytoplasm; PDB: 1PF9_Q 1AON_P 1SX4_T 1SVT_R 2C7D_P 1PCQ_O 2C7C_Q 1GRU_Q 1WNR_F 1P3H_I ....

>KOG1641 consensus Mitochondrial chaperonin [Posttranslational modification, protein turnover, chaperones]

Probab=99.95  E-value=2.8e-28  Score=192.84  Aligned_cols=97  Identities=34%  Similarity=0.526  Sum_probs=89.6

Q ss_pred             cccceeceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCCe-eeeeeeeCCcEEEeccCCceEE
Q 025388           55 APKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKVPGTQVIYSKYAGTEL  133 (253)
Q Consensus        55 ~~~~~~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~~-~p~~Vkv~GD~Vl~~ky~G~ev  133 (253)
                      .+.++++.|+.|||||++.+++++|+|||+||+++++|.++|+|+|||||.++..++ +|++|++ ||+|+|++|+|++|
T Consensus         5 ~~~~kk~vPl~DRVLVqr~~a~~KT~gGilLPEks~~K~~~g~VvavGpG~~~~~G~~v~~~Vk~-Gd~VLlpeygGt~V   83 (104)
T KOG1641|consen    5 SWEIKKVVPLLDRVLVQRIEAPTKTAGGILLPEKSVGKLLQGTVVAVGPGSRDKGGEIVPVSVKV-GDRVLLPEYGGTKV   83 (104)
T ss_pred             hhhhhhhccccceeeeeeeeccccccceeEeccccccccceEEEEEEcCccccCCCCCcCccccC-CCEEEeeccCCcEE
Confidence            456789999999999999999999999999999999999999999999999987655 7999999 99999999999999


Q ss_pred             EEcC-eeeeEEeecceeeee
Q 025388          134 EFNG-ANHLILREDDVVGIL  152 (253)
Q Consensus       134 ~~~g-~~~~llre~DIlaii  152 (253)
                      ++++ ++|++++++|+|+++
T Consensus        84 ~l~~~~~~~~fr~e~~l~~~  103 (104)
T KOG1641|consen   84 KLGDEDEYHLFRDEDDLLAI  103 (104)
T ss_pred             eccCCceeEEecchhhhhhh
Confidence            9984 689999999988765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	253
1hx5_A	99	Crystal Structure Of M. Tuberculosis Chaperonin-10		4e-20
1lep_A	99	Three-Dimensional Structure Of The Immunodominant H		1e-17
1we3_O	100	Crystal Structure Of The Chaperonin Complex Cpn60CP		4e-16
1we3_O	100	Crystal Structure Of The Chaperonin Complex Cpn60CP		8e-16
1wnr_A	94	Crystal Structure Of The Cpn10 From Thermus Thermop		9e-16
3nx6_A	95	Crystal Structure Of Co-Chaperonin, Groes (Xoo4289)		2e-14
3nx6_A	95	Crystal Structure Of Co-Chaperonin, Groes (Xoo4289)		3e-14
1aon_O	97	Crystal Structure Of The Asymmetric Chaperonin Comp		5e-10

>pdb|1HX5|A Chain A, Crystal Structure Of M. Tuberculosis Chaperonin-10 Length = 99

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 69/96 (71%), Gaps = 2/96 (2%)
Query: 159 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIA 217
           ++KPL D++ ++  EAE TTA GL++ + +KEKP  G V+AVGPG  DE+G ++ PL +A
Sbjct: 4   NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVA 63
Query: 218 PGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 253
            G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct: 64  EGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 98

>pdb|1LEP|A Chain A, Three-Dimensional Structure Of The Immunodominant Heat- Shock Protein Chaperonin-10 Of Mycobacterium Leprae Length = 99

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEG-NRKPLSIAP 218
           +KPL D++ ++  EAE  T  GL++ E +KEKP  G V+AVGPG  DE+G  R P+ ++ 
Sbjct: 5   IKPLEDKILVQAGEAETMTPSGLVIPENAKEKPQEGTVVAVGPGRWDEDGAKRIPVDVSE 64
Query: 219 GNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 253
           G+ V+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct: 65  GDIVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 98

>pdb|1WE3|O Chain O, Crystal Structure Of The Chaperonin Complex Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS Length = 100

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
Query: 59  TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVK 117
           T IKPLGDRV+VK    E KT GGI LP  A+ KPQ G+V+AVG G+ +    ++ + VK
Sbjct: 6   TVIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVK 65
Query: 118 VPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
             G  V+++KY GTE+E +G  ++IL E D++ +L+
Sbjct: 66  -EGDIVVFAKYGGTEIEIDGEEYVILSERDLLAVLQ 100

>pdb|1WE3|O Chain O, Crystal Structure Of The Chaperonin Complex Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS Length = 100

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           +KPL DRV +K  E E  T GG++L + +KEKP  G VIAVG G + E G R PL +  G
Sbjct: 8   IKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEG 67
Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 253
           + V+++KY G + +  DG  Y+ L   +++AVL 
Sbjct: 68  DIVVFAKYGGTEIE-IDGEEYVILSERDLLAVLQ 100

>pdb|1WNR|A Chain A, Crystal Structure Of The Cpn10 From Thermus Thermophilus Hb8 Length = 94

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           +KPL DRV +K  E E  T GG++L + +KEKP  G VIAVG G + E G R PL +  G
Sbjct: 2   IKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEG 61
Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 253
           + V+++KY G + +  DG  Y+ L   +++AVL 
Sbjct: 62  DIVVFAKYGGTEIE-IDGEEYVILSERDLLAVLQ 94

>pdb|3NX6|A Chain A, Crystal Structure Of Co-Chaperonin, Groes (Xoo4289) From Xanthomonas Oryzae Pv. Oryzae Kacc10331 Length = 95

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 58/93 (62%)
Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVP 119
           SIKPL DRV+VK    +E + GGI +P +A+ K   GEVVA+G GK +    L   V   
Sbjct: 2   SIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKV 61
Query: 120 GTQVIYSKYAGTELEFNGANHLILREDDVVGIL 152
           G +VIY +YAG+  +  G  + +LREDD++ ++
Sbjct: 62  GDKVIYGQYAGSSYKSEGVEYKVLREDDILAVI 94

>pdb|3NX6|A Chain A, Crystal Structure Of Co-Chaperonin, Groes (Xoo4289) From Xanthomonas Oryzae Pv. Oryzae Kacc10331 Length = 95

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPG-PLDEEGNRKPLSIAP 218
           +KPL+DRV +K  EA+E +AGG+++ +++KEK + G V+A+G G PLD      P+ +  
Sbjct: 3   IKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPV-VKV 61
Query: 219 GNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
           G+ V+Y +YAG+ +K S+G  Y  LR  +++AV+
Sbjct: 62  GDKVIYGQYAGSSYK-SEGVEYKVLREDDILAVI 94

>pdb|1AON|O Chain O, Crystal Structure Of The Asymmetric Chaperonin Complex GroelGROES(ADP)7 Length = 97

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 57/94 (60%)
Query: 159 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAP 218
           +++PL+DRV +K  E E  +AGG++LT ++  K + G V+AVG G + E G  KPL +  
Sbjct: 2   NIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKV 61
Query: 219 GNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
           G+ V+++   G   +  D    + +  S+++A++
Sbjct: 62  GDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIV 95

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	253
1p3h_A	99	10 kDa chaperonin; beta barrel, acidic cluster, fl	2e-34
1p3h_A	99	10 kDa chaperonin; beta barrel, acidic cluster, fl	8e-32
1we3_O	100	CPN10(groes); chaperonin, chaperone, groel, HSP60,	4e-34
1we3_O	100	CPN10(groes); chaperonin, chaperone, groel, HSP60,	9e-33
3nx6_A	95	10KDA chaperonin; bacterial blight, XOO4289, groes	5e-33
3nx6_A	95	10KDA chaperonin; bacterial blight, XOO4289, groes	6e-33
1pcq_O	97	Groes protein; chaperone; HET: ADP; 2.81A {Escheri	2e-31
1pcq_O	97	Groes protein; chaperone; HET: ADP; 2.81A {Escheri	2e-30

>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A Length = 99

 Score =  118 bits (299), Expect = 2e-34
 Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 3/96 (3%)

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTV--GKAKLDISVK 117
           +IKPL D++LV+    E  T  G+ +P  A+ KPQ G VVAVG G+    G+ ++ + V 
Sbjct: 4   NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVA 63

Query: 118 VPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
             G  VIYSKY GTE+++NG  +LIL   DV+ ++ 
Sbjct: 64  E-GDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVS 98

>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A Length = 99

 Score =  111 bits (281), Expect = 8e-32
 Identities = 47/95 (49%), Positives = 67/95 (70%), Gaps = 2/95 (2%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGN-RKPLSIAP 218
           +KPL D++ ++  EAE TTA GL++ + +KEKP  G V+AVGPG  DE+G  R PL +A 
Sbjct: 5   IKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAE 64

Query: 219 GNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 253
           G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct: 65  GDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 98

>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A Length = 100

 Score =  117 bits (296), Expect = 4e-34
 Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 2/95 (2%)

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKV 118
            IKPLGDRV+VK    E KT GGI LP  A+ KPQ G+V+AVG G+ +   +   + VK 
Sbjct: 7   VIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKE 66

Query: 119 PGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
            G  V+++KY GTE+E +G  ++IL E D++ +L+
Sbjct: 67  -GDIVVFAKYGGTEIEIDGEEYVILSERDLLAVLQ 100

>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A Length = 100

 Score =  114 bits (287), Expect = 9e-33
 Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           +KPL DRV +K  E E  T GG++L + +KEKP  G VIAVG G + E G R PL +  G
Sbjct: 8   IKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEG 67

Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
           + V+++KY G + +  DG  Y+ L   +++AVL
Sbjct: 68  DIVVFAKYGGTEIE-IDGEEYVILSERDLLAVL 99

>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} Length = 95

 Score =  114 bits (289), Expect = 5e-33
 Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKV 118
           SIKPL DRV+VK    +E + GGI +P +A+ K   GEVVA+G GK +    L    VKV
Sbjct: 2   SIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKV 61

Query: 119 PGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 152
            G +VIY +YAG+  +  G  + +LREDD++ ++
Sbjct: 62  -GDKVIYGQYAGSSYKSEGVEYKVLREDDILAVI 94

>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} Length = 95

 Score =  114 bits (288), Expect = 6e-33
 Identities = 36/93 (38%), Positives = 63/93 (67%), Gaps = 1/93 (1%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           +KPL+DRV +K  EA+E +AGG+++ +++KEK + G V+A+G G   + G+     +  G
Sbjct: 3   IKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKVG 62

Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
           + V+Y +YAG+ +K S+G  Y  LR  +++AV+
Sbjct: 63  DKVIYGQYAGSSYK-SEGVEYKVLREDDILAVI 94

>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O Length = 97

 Score =  110 bits (278), Expect = 2e-31
 Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 3/96 (3%)

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKV 118
           +I+PL DRV+VK K VE K+ GGI L  +A  K   GEV+AVG G+ +   ++  + VKV
Sbjct: 2   NIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKV 61

Query: 119 PGTQVIYSK-YAGTELEFNGANHLILREDDVVGILE 153
            G  VI++  Y     + +    LI+ E D++ I+E
Sbjct: 62  -GDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVE 96

>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O Length = 97

 Score =  108 bits (272), Expect = 2e-30
 Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 2/94 (2%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           ++PL+DRV +K  E E  +AGG++LT ++  K + G V+AVG G + E G  KPL +  G
Sbjct: 3   IRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVG 62

Query: 220 NTVMYSK-YAGNDFKGSDGTNYIALRASEVMAVL 252
           + V+++  Y     K  D    + +  S+++A++
Sbjct: 63  DIVIFNDGYGVKSEK-IDNEEVLIMSESDILAIV 95

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	253
3nx6_A	95	10KDA chaperonin; bacterial blight, XOO4289, groes	100.0
1p3h_A	99	10 kDa chaperonin; beta barrel, acidic cluster, fl	100.0
1pcq_O	97	Groes protein; chaperone; HET: ADP; 2.81A {Escheri	100.0
1we3_O	100	CPN10(groes); chaperonin, chaperone, groel, HSP60,	100.0
3nx6_A	95	10KDA chaperonin; bacterial blight, XOO4289, groes	100.0
1p3h_A	99	10 kDa chaperonin; beta barrel, acidic cluster, fl	100.0
1pcq_O	97	Groes protein; chaperone; HET: ADP; 2.81A {Escheri	100.0
1we3_O	100	CPN10(groes); chaperonin, chaperone, groel, HSP60,	100.0
1g31_A	111	GP31; chaperone, CO-chaperonin, groes, in VIVO pro	99.91
1g31_A	111	GP31; chaperone, CO-chaperonin, groes, in VIVO pro	99.91

>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0

Probab=100.00  E-value=4.8e-37  Score=240.58  Aligned_cols=95  Identities=37%  Similarity=0.740  Sum_probs=73.2

Q ss_pred             ceeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCCCeEEEecCC
Q 025388          158 KDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDG  237 (253)
Q Consensus       158 ~~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kyaG~ev~~~dg  237 (253)
                      ++|+||+||||||+.++|++|+|||+||++|++||++|+|+|||||+.+++|+++|++||+||+|+|++|+|+++++ ||
T Consensus         1 m~i~PL~DRVlVk~~e~e~kT~gGI~LP~~a~eK~~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~ky~Gtevk~-dg   79 (95)
T 3nx6_A            1 MSIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKS-EG   79 (95)
T ss_dssp             -CCCCCTTEEEEEEC-------------------CEEEEEEEECSCEECTTSCEECCSCCTTCEEEECTTCSEEEEE-TT
T ss_pred             CCeEEcCCEEEEEEccccccccceEEeCccccCCccccEEEEECCCeECCCCCEEccccCCCCEEEECCcCCeEEEE-CC
Confidence            36899999999999999999999999999999999999999999999999999999999999999999999999996 99


Q ss_pred             eEEEEEeCCceEEEeC
Q 025388          238 TNYIALRASEVMAVLS  253 (253)
Q Consensus       238 ~~y~vlr~~DIlAvi~  253 (253)
                      ++|+++|++||||++|
T Consensus        80 ~ey~i~re~DILavie   95 (95)
T 3nx6_A           80 VEYKVLREDDILAVIG   95 (95)
T ss_dssp             EEEEEEEGGGEEEECC
T ss_pred             EEEEEEEHHHEEEEeC
Confidence            9999999999999986

>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A

Probab=100.00  E-value=1.2e-36  Score=239.93  Aligned_cols=95  Identities=49%  Similarity=0.899  Sum_probs=92.4

Q ss_pred             ceeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCC-CeeeecCCCCCEEEecCCCCeEEEecC
Q 025388          158 KDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSD  236 (253)
Q Consensus       158 ~~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G-~~~p~~Vk~GD~Vlf~kyaG~ev~~~d  236 (253)
                      ++|+||+||||||+.++|++|+|||+||+++++||++|+|+|||||+++++| +++|++||+||+|+|++|+|+++++ |
T Consensus         3 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~ky~Gtevk~-d   81 (99)
T 1p3h_A            3 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKY-N   81 (99)
T ss_dssp             CEEEECTTEEEEEECCCCCBCTTSCBCCCSSCCSEEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEE-T
T ss_pred             ceeEEeCCEEEEEEccccccccceEEeCcccccCCceEEEEEECCCcCcCCCCEEEccccCCCCEEEECCcCCeEEEE-C
Confidence            5799999999999999999999999999999999999999999999999999 9999999999999999999999996 9


Q ss_pred             CeEEEEEeCCceEEEeC
Q 025388          237 GTNYIALRASEVMAVLS  253 (253)
Q Consensus       237 g~~y~vlr~~DIlAvi~  253 (253)
                      |++|+++|++||||+++
T Consensus        82 geey~i~re~DIlavi~   98 (99)
T 1p3h_A           82 GEEYLILSARDVLAVVS   98 (99)
T ss_dssp             TEEEEEEEGGGEEEEEE
T ss_pred             CEEEEEEEhHhEEEEee
Confidence            99999999999999985

>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O

Probab=100.00  E-value=1.4e-36  Score=238.77  Aligned_cols=95  Identities=34%  Similarity=0.626  Sum_probs=92.3

Q ss_pred             ceeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecC-CCCeEEEecC
Q 025388          158 KDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSK-YAGNDFKGSD  236 (253)
Q Consensus       158 ~~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~k-yaG~ev~~~d  236 (253)
                      ++|+||+||||||+.++|++|+|||+||+++++||++|+|+|||||+.+++|+++|++||+||+|+|++ |+|+++++ |
T Consensus         1 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k~y~Gtevk~-d   79 (97)
T 1pcq_O            1 MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKI-D   79 (97)
T ss_dssp             CEEEECSSEEEEEECCTTCTTTTSSCCCCCCSCCCCEEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEEE-T
T ss_pred             CCceEcCCEEEEEEccccccccceEEeCcccccCCcccEEEEEcCceecCCCCEEecccCCCCEEEECCccCCeEEEE-C
Confidence            479999999999999999999999999999999999999999999999999999999999999999999 99999996 9


Q ss_pred             CeEEEEEeCCceEEEeC
Q 025388          237 GTNYIALRASEVMAVLS  253 (253)
Q Consensus       237 g~~y~vlr~~DIlAvi~  253 (253)
                      |++|+++|++||||+++
T Consensus        80 geey~i~re~DIlavv~   96 (97)
T 1pcq_O           80 NEEVLIMSESDILAIVE   96 (97)
T ss_dssp             TEEEEEEEGGGEEEEEE
T ss_pred             CEEEEEEEhHHEEEEec
Confidence            99999999999999985

>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A

Probab=100.00  E-value=1.3e-36  Score=240.00  Aligned_cols=95  Identities=43%  Similarity=0.777  Sum_probs=92.1

Q ss_pred             ceeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCCCeEEEecCC
Q 025388          158 KDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDG  237 (253)
Q Consensus       158 ~~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kyaG~ev~~~dg  237 (253)
                      ++|+||+||||||+.++|++|+|||+||+++++||++|+|+|||||+.+++|+++|++||+||+|+|++|+|+++++ ||
T Consensus         6 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~ky~Gtevk~-dg   84 (100)
T 1we3_O            6 TVIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEI-DG   84 (100)
T ss_dssp             CCEEECTTCEEEEECCCCSSCTTCCCCCTTTSCCCSEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEEEC-SS
T ss_pred             ceeEEeCCEEEEEEccccccccceEEeCcccccCCcCCEEEEECCCcCCCCCCEEeeecCCCCEEEECCCCCeEEEE-CC
Confidence            34999999999999999999999999999999999999999999999999999999999999999999999999996 89


Q ss_pred             eEEEEEeCCceEEEeC
Q 025388          238 TNYIALRASEVMAVLS  253 (253)
Q Consensus       238 ~~y~vlr~~DIlAvi~  253 (253)
                      ++|+++|++||||+++
T Consensus        85 eeyli~re~DIlavi~  100 (100)
T 1we3_O           85 EEYVILSERDLLAVLQ  100 (100)
T ss_dssp             CEEEEECTTTEEEEEC
T ss_pred             EEEEEEEhHHEEEEeC
Confidence            9999999999999986

>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0

Probab=100.00  E-value=2.3e-36  Score=236.65  Aligned_cols=94  Identities=44%  Similarity=0.730  Sum_probs=70.8

Q ss_pred             eeceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCCe-eeeeeeeCCcEEEeccCCceEEEEcC
Q 025388           59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKVPGTQVIYSKYAGTELEFNG  137 (253)
Q Consensus        59 ~~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~~-~p~~Vkv~GD~Vl~~ky~G~ev~~~g  137 (253)
                      |+|+||+|||||++.++|++|+|||+||++|++||+.|+|+|||||+.++++. +|++||+ ||+|+|++|+|++|++||
T Consensus         1 m~i~PL~DRVlVk~~e~e~kT~gGI~LP~~a~eK~~~G~VvAVG~G~~~~~G~~~p~~Vkv-GD~Vl~~ky~Gtevk~dg   79 (95)
T 3nx6_A            1 MSIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKV-GDKVIYGQYAGSSYKSEG   79 (95)
T ss_dssp             -CCCCCTTEEEEEEC-------------------CEEEEEEEECSCEECTTSCEECCSCCT-TCEEEECTTCSEEEEETT
T ss_pred             CCeEEcCCEEEEEEccccccccceEEeCccccCCccccEEEEECCCeECCCCCEEccccCC-CCEEEECCcCCeEEEECC
Confidence            57999999999999999999999999999999999999999999999987764 8999999 999999999999999999


Q ss_pred             eeeeEEeecceeeeec
Q 025388          138 ANHLILREDDVVGILE  153 (253)
Q Consensus       138 ~~~~llre~DIlaii~  153 (253)
                      ++|+++||+||||+++
T Consensus        80 ~ey~i~re~DILavie   95 (95)
T 3nx6_A           80 VEYKVLREDDILAVIG   95 (95)
T ss_dssp             EEEEEEEGGGEEEECC
T ss_pred             EEEEEEEHHHEEEEeC
Confidence            9999999999999985

>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A

Probab=100.00  E-value=7.7e-36  Score=235.30  Aligned_cols=94  Identities=43%  Similarity=0.758  Sum_probs=90.1

Q ss_pred             eeceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCC--eeeeeeeeCCcEEEeccCCceEEEEc
Q 025388           59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA--KLDISVKVPGTQVIYSKYAGTELEFN  136 (253)
Q Consensus        59 ~~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~--~~p~~Vkv~GD~Vl~~ky~G~ev~~~  136 (253)
                      ++|+||+|||||++.++|++|+|||+||+++++||+.|+|||||||+.++++  .+|++||+ ||+|+|++|+|++|++|
T Consensus         3 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~~p~~Vkv-GD~Vlf~ky~Gtevk~d   81 (99)
T 1p3h_A            3 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAE-GDTVIYSKYGGTEIKYN   81 (99)
T ss_dssp             CEEEECTTEEEEEECCCCCBCTTSCBCCCSSCCSEEEEEEEEECCCEECSSSSCEECCSCCT-TCEEEEECTTCEEEEET
T ss_pred             ceeEEeCCEEEEEEccccccccceEEeCcccccCCceEEEEEECCCcCcCCCCEEEccccCC-CCEEEECCcCCeEEEEC
Confidence            7899999999999999999999999999999999999999999999987665  48999999 99999999999999999


Q ss_pred             CeeeeEEeecceeeeec
Q 025388          137 GANHLILREDDVVGILE  153 (253)
Q Consensus       137 g~~~~llre~DIlaii~  153 (253)
                      |++|+|+||+||||+++
T Consensus        82 geey~i~re~DIlavi~   98 (99)
T 1p3h_A           82 GEEYLILSARDVLAVVS   98 (99)
T ss_dssp             TEEEEEEEGGGEEEEEE
T ss_pred             CEEEEEEEhHhEEEEee
Confidence            99999999999999986

>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O

Probab=100.00  E-value=1.1e-35  Score=233.76  Aligned_cols=94  Identities=40%  Similarity=0.666  Sum_probs=89.9

Q ss_pred             eeceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCC-eeeeeeeeCCcEEEecc-CCceEEEEc
Q 025388           59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKVPGTQVIYSK-YAGTELEFN  136 (253)
Q Consensus        59 ~~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~-~~p~~Vkv~GD~Vl~~k-y~G~ev~~~  136 (253)
                      |+|+||+|||||++.++|++|+|||+||+++++||+.|+|+|||||+.++++ .+|++||+ ||+|+|++ |+|++|++|
T Consensus         1 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~Vkv-GD~Vlf~k~y~Gtevk~d   79 (97)
T 1pcq_O            1 MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKV-GDIVIFNDGYGVKSEKID   79 (97)
T ss_dssp             CEEEECSSEEEEEECCTTCTTTTSSCCCCCCSCCCCEEEEEEECSEECTTSSSCEECSCCT-TCEEEECCCSSCEEEEET
T ss_pred             CCceEcCCEEEEEEccccccccceEEeCcccccCCcccEEEEEcCceecCCCCEEecccCC-CCEEEECCccCCeEEEEC
Confidence            5799999999999999999999999999999999999999999999886665 48999999 99999999 999999999


Q ss_pred             CeeeeEEeecceeeeec
Q 025388          137 GANHLILREDDVVGILE  153 (253)
Q Consensus       137 g~~~~llre~DIlaii~  153 (253)
                      |++|+++||+||||+++
T Consensus        80 geey~i~re~DIlavv~   96 (97)
T 1pcq_O           80 NEEVLIMSESDILAIVE   96 (97)
T ss_dssp             TEEEEEEEGGGEEEEEE
T ss_pred             CEEEEEEEhHHEEEEec
Confidence            99999999999999987

>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A

Probab=100.00  E-value=8.4e-36  Score=235.45  Aligned_cols=94  Identities=48%  Similarity=0.831  Sum_probs=89.5

Q ss_pred             eeceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCC-eeeeeeeeCCcEEEeccCCceEEEEcC
Q 025388           59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKVPGTQVIYSKYAGTELEFNG  137 (253)
Q Consensus        59 ~~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~-~~p~~Vkv~GD~Vl~~ky~G~ev~~~g  137 (253)
                      ++|+||+|||||++.++|++|+|||+||+++++||+.|+|+|||||+..+++ .+|++||+ ||+|+|++|+|++|++||
T Consensus         6 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~Vkv-GD~Vlf~ky~Gtevk~dg   84 (100)
T 1we3_O            6 TVIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKE-GDIVVFAKYGGTEIEIDG   84 (100)
T ss_dssp             CCEEECTTCEEEEECCCCSSCTTCCCCCTTTSCCCSEEEESCCCCCEECTTSCEECCSCCT-TCEEEECTTCSEEEECSS
T ss_pred             ceeEEeCCEEEEEEccccccccceEEeCcccccCCcCCEEEEECCCcCCCCCCEEeeecCC-CCEEEECCCCCeEEEECC
Confidence            5699999999999999999999999999999999999999999999887665 48999999 999999999999999999


Q ss_pred             eeeeEEeecceeeeec
Q 025388          138 ANHLILREDDVVGILE  153 (253)
Q Consensus       138 ~~~~llre~DIlaii~  153 (253)
                      ++|+++||+||||+++
T Consensus        85 eeyli~re~DIlavi~  100 (100)
T 1we3_O           85 EEYVILSERDLLAVLQ  100 (100)
T ss_dssp             CEEEEECTTTEEEEEC
T ss_pred             EEEEEEEhHHEEEEeC
Confidence            9999999999999985

>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O

Probab=99.91  E-value=6.6e-26  Score=181.81  Aligned_cols=88  Identities=15%  Similarity=0.164  Sum_probs=80.4

Q ss_pred             eeceecCCeEEEEecc----cccccceeEEecCC-CCCCCcceeEEEEcCceecCCCeeeeeeeeCCcEEEec--cCC--
Q 025388           59 TSIKPLGDRVLVKIKT----VEEKTDGGIFLPSA-AQTKPQAGEVVAVGEGKTVGKAKLDISVKVPGTQVIYS--KYA--  129 (253)
Q Consensus        59 ~~lkPL~DRVLVk~~e----~e~kT~gGI~LP~s-a~~k~~~G~VVAVG~G~~~~~~~~p~~Vkv~GD~Vl~~--ky~--  129 (253)
                      ++|+||+|||||++.+    +|++|+|||+||++ +++||+.|+|+|||+|+      .++.||+ ||+|+|+  +|+  
T Consensus         7 m~ikPL~drVlvk~~~~~~~~E~kT~sGIilp~~aakekp~~g~VvAVG~g~------~~~~vKv-GD~Vl~~kg~~~nv   79 (111)
T 1g31_A            7 LPIRAVGEYVILVSEPAQAGDEEVTESGLIIGKRVQGEVPELCVVHSVGPDV------PEGFCEV-GDLTSLPVGQIRNV   79 (111)
T ss_dssp             CSCEECTTEEEEEECSSCGGGCTTSCTTCCCCHHHHHHSEEEEEEEEECTTS------CTTSCCT-TCEEEEEGGGCEEE
T ss_pred             cCceecCCEEEEEEcccCCCcceEcCCcEEeCCCccccCCceEEEEEECCCC------ccccccC-CCEEEECCCccccC
Confidence            7899999999999988    78999999999999 69999999999999997      3467999 9999994  577  


Q ss_pred             ------ceEEEEcC--eeeeEEeecceeeeec
Q 025388          130 ------GTELEFNG--ANHLILREDDVVGILE  153 (253)
Q Consensus       130 ------G~ev~~~g--~~~~llre~DIlaii~  153 (253)
                            |.+++.++  ++|++++++||||+++
T Consensus        80 p~p~vi~g~i~~~~~~e~y~i~~~~dIlavy~  111 (111)
T 1g31_A           80 PHPFVALGLKQPKEIKQKFVTCHYKAIPCLYK  111 (111)
T ss_dssp             CCHHHHTTSSCGGGCCCCEEEEEGGGCCEECC
T ss_pred             CCcceeeeEEccCCcccEEEEEehHHeEEEeC
Confidence                  78999998  9999999999999873

>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O

Probab=99.91  E-value=2.8e-25  Score=178.14  Aligned_cols=88  Identities=15%  Similarity=0.223  Sum_probs=78.9

Q ss_pred             ceeeecCCeEEEEEec----ccccccceEEeecc-ccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEe--cCCC--
Q 025388          158 KDLKPLNDRVFIKVAE----AEETTAGGLLLTEA-SKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMY--SKYA--  228 (253)
Q Consensus       158 ~~ikPL~DRVLVk~~e----~e~kT~gGIiLp~s-a~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf--~kya--  228 (253)
                      ++|+||+|||||++.+    +|++|+|||+||++ ++|||+.|+|+|||+|.       .++.||+||+|+|  .+|+  
T Consensus         7 m~ikPL~drVlvk~~~~~~~~E~kT~sGIilp~~aakekp~~g~VvAVG~g~-------~~~~vKvGD~Vl~~kg~~~nv   79 (111)
T 1g31_A            7 LPIRAVGEYVILVSEPAQAGDEEVTESGLIIGKRVQGEVPELCVVHSVGPDV-------PEGFCEVGDLTSLPVGQIRNV   79 (111)
T ss_dssp             CSCEECTTEEEEEECSSCGGGCTTSCTTCCCCHHHHHHSEEEEEEEEECTTS-------CTTSCCTTCEEEEEGGGCEEE
T ss_pred             cCceecCCEEEEEEcccCCCcceEcCCcEEeCCCccccCCceEEEEEECCCC-------ccccccCCCEEEECCCccccC
Confidence            5799999999999988    78999999999999 69999999999999997       3467999999999  4577  


Q ss_pred             ------CeEEEecCC--eEEEEEeCCceEEEeC
Q 025388          229 ------GNDFKGSDG--TNYIALRASEVMAVLS  253 (253)
Q Consensus       229 ------G~ev~~~dg--~~y~vlr~~DIlAvi~  253 (253)
                            |.+++. |+  ++|++++++||||+..
T Consensus        80 p~p~vi~g~i~~-~~~~e~y~i~~~~dIlavy~  111 (111)
T 1g31_A           80 PHPFVALGLKQP-KEIKQKFVTCHYKAIPCLYK  111 (111)
T ss_dssp             CCHHHHTTSSCG-GGCCCCEEEEEGGGCCEECC
T ss_pred             CCcceeeeEEcc-CCcccEEEEEehHHeEEEeC
Confidence                  778884 77  7999999999999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	253
d1p3ha_	99	b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium	2e-28
d1p3ha_	99	b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium	3e-25
d1aono_	97	b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia c	4e-28
d1aono_	97	b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia c	3e-27
d1we3o_	96	b.35.1.1 (O:) Chaperonin-10 (GroES) {Thermus therm	1e-26
d1we3o_	96	b.35.1.1 (O:) Chaperonin-10 (GroES) {Thermus therm	9e-23

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 99

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  101 bits (254), Expect = 2e-28
 Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 3/96 (3%)

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTV--GKAKLDISVK 117
           +IKPL D++LV+    E  T  G+ +P  A+ KPQ G VVAVG G+    G+ ++ + V 
Sbjct: 4   NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVA 63

Query: 118 VPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
             G  VIYSKY GTE+++NG  +LIL   DV+ ++ 
Sbjct: 64  E-GDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVS 98

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 99

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 93.7 bits (233), Expect = 3e-25
 Identities = 47/96 (48%), Positives = 68/96 (70%), Gaps = 2/96 (2%)

Query: 159 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGN-RKPLSIA 217
           ++KPL D++ ++  EAE TTA GL++ + +KEKP  G V+AVGPG  DE+G  R PL +A
Sbjct: 4   NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVA 63

Query: 218 PGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 253
            G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct: 64  EGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 98

>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli [TaxId: 562]} Length = 97

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Escherichia coli [TaxId: 562]

 Score =  101 bits (252), Expect = 4e-28
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 1/95 (1%)

Query: 60  SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKVP 119
           +I+PL DRV+VK K VE K+ GGI L  +A  K   GEV+AVG G+ +   ++       
Sbjct: 2   NIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKV 61

Query: 120 GTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 153
           G  VI++   G +  + +    LI+ E D++ I+E
Sbjct: 62  GDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVE 96

>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli [TaxId: 562]} Length = 97

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Escherichia coli [TaxId: 562]

 Score = 98.7 bits (246), Expect = 3e-27
 Identities = 31/93 (33%), Positives = 56/93 (60%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           ++PL+DRV +K  E E  +AGG++LT ++  K + G V+AVG G + E G  KPL +  G
Sbjct: 3   IRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVG 62

Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
           + V+++   G   +  D    + +  S+++A++
Sbjct: 63  DIVIFNDGYGVKSEKIDNEEVLIMSESDILAIV 95

>d1we3o_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Thermus thermophilus [TaxId: 274]} Length = 96

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Thermus thermophilus [TaxId: 274]

 Score = 97.3 bits (242), Expect = 1e-26
 Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 2/96 (2%)

Query: 59  TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVK 117
           T IKPLGDRV+VK    E KT GGI LP  A+ KPQ G+V+AVG G+ +   +   + VK
Sbjct: 2   TVIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVK 61

Query: 118 VPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 153
             G  V+++KY GTE+E +G  ++IL E D++ +L+
Sbjct: 62  E-GDIVVFAKYGGTEIEIDGEEYVILSERDLLAVLQ 96

>d1we3o_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Thermus thermophilus [TaxId: 274]} Length = 96

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Thermus thermophilus [TaxId: 274]

 Score = 87.3 bits (216), Expect = 9e-23
 Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 160 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPG 219
           +KPL DRV +K  E E  T GG++L + +KEKP  G VIAVG G + E G R PL +  G
Sbjct: 4   IKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEG 63

Query: 220 NTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 252
           + V+++KY G + +  DG  Y+ L   +++AVL
Sbjct: 64  DIVVFAKYGGTEIE-IDGEEYVILSERDLLAVL 95

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	253
d1aono_	97	Chaperonin-10 (GroES) {Escherichia coli [TaxId: 56	99.97
d1we3o_	96	Chaperonin-10 (GroES) {Thermus thermophilus [TaxId	99.97
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	99.97
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	99.97
d1aono_	97	Chaperonin-10 (GroES) {Escherichia coli [TaxId: 56	99.96
d1we3o_	96	Chaperonin-10 (GroES) {Thermus thermophilus [TaxId	99.96
d1g31a_	107	GP31 co-chaperonin {Bacteriophage T4 [TaxId: 10665	95.4
d1g31a_	107	GP31 co-chaperonin {Bacteriophage T4 [TaxId: 10665	95.02
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	83.93
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	82.18
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	82.17
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	80.28

>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2.3e-31  Score=205.75  Aligned_cols=95  Identities=34%  Similarity=0.609  Sum_probs=90.3

Q ss_pred             ceeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCCCeE-EEecC
Q 025388          158 KDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGND-FKGSD  236 (253)
Q Consensus       158 ~~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kyaG~e-v~~~d  236 (253)
                      ++|+||+|||||++.+++++|+|||+||++++++++.|+|+|||+|...++|+..|+.+|+||+|+|++|+|.+ ++ .|
T Consensus         1 m~ikPlgdrVLVk~~~~e~kT~gGIiLp~~~~~~~~~g~VvavG~g~~~~~g~~~~~~vk~GD~Vl~~~~~g~~~~~-~d   79 (97)
T d1aono_           1 MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEK-ID   79 (97)
T ss_dssp             CCEEECTTEEEEEECCTTCTTTTSSCCCCCCSCCCCEEEEEEECSBCCTTSSCCCBCSCCTTCEEEECCCSSCEEEE-SS
T ss_pred             CCceEcCCEEEEEEcccccEecceEEECCccccCceeEEEEEEeeeEEccCCcCccccCCCCCEEEEecccCceEEE-EC
Confidence            46999999999999999999999999999999999999999999999999999999999999999999998865 66 49


Q ss_pred             CeEEEEEeCCceEEEeC
Q 025388          237 GTNYIALRASEVMAVLS  253 (253)
Q Consensus       237 g~~y~vlr~~DIlAvi~  253 (253)
                      |++|++++++||||+||
T Consensus        80 g~~y~ii~e~dIlavie   96 (97)
T d1aono_          80 NEEVLIMSESDILAIVE   96 (97)
T ss_dssp             SCEEEEEETTTEEEEEC
T ss_pred             CEEEEEEEHHHEEEEEe
Confidence            99999999999999996

>d1we3o_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=1.5e-31  Score=206.75  Aligned_cols=94  Identities=44%  Similarity=0.785  Sum_probs=91.6

Q ss_pred             eeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCCCeEEEecCCe
Q 025388          159 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGT  238 (253)
Q Consensus       159 ~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kyaG~ev~~~dg~  238 (253)
                      .|+||+|||||++.+++++|+||||||++++++++.|+|+|+|+|..+++|+..|+.+++||+|+|++|+|++|++ ||+
T Consensus         3 ~ikPlgdrVLVk~~~~~~kT~gGIiLp~~~~~k~~~g~VvavG~g~~~~~g~~~p~~vkvGD~Vl~~~~~g~~v~~-~g~   81 (96)
T d1we3o_           3 VIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEI-DGE   81 (96)
T ss_dssp             CEEECTTCEEEEECCCCSSCTTCCCCCTTTSCCCSEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEEEC-SSC
T ss_pred             cceEcCCEEEEEEccccceecccEEecccccccceEEEEeeecceEecCCCCEEEeeEEeCCEEEEccCCCcEEEE-CCE
Confidence            5899999999999999999999999999999999999999999999999999999999999999999999999996 899


Q ss_pred             EEEEEeCCceEEEeC
Q 025388          239 NYIALRASEVMAVLS  253 (253)
Q Consensus       239 ~y~vlr~~DIlAvi~  253 (253)
                      +|++++++||||++|
T Consensus        82 ~y~ii~e~dIlavie   96 (96)
T d1we3o_          82 EYVILSERDLLAVLQ   96 (96)
T ss_dssp             EEEEECTTTEEEEEC
T ss_pred             EEEEEEHHHEEEEeC
Confidence            999999999999986

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=4.7e-31  Score=205.11  Aligned_cols=95  Identities=49%  Similarity=0.899  Sum_probs=89.9

Q ss_pred             ceeeecCCeEEEEEecccccccceEEeeccccCCCceeEEEEecCCccCCCC-CeeeecCCCCCEEEecCCCCeEEEecC
Q 025388          158 KDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSD  236 (253)
Q Consensus       158 ~~ikPL~DRVLVk~~e~e~kT~gGIiLp~sa~ek~~~G~VVAVGpG~~~~~G-~~~p~~Vk~GD~Vlf~kyaG~ev~~~d  236 (253)
                      ++|+||+|||||++.+.+++|+|||+||++++++++.|+|+|||||.++++| ...|+.+|+||+|+|++|+|++|++ |
T Consensus         3 m~ikPlgdrVLVk~~~~~~kT~gGIiLp~~~~~~~~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~~~~g~~v~~-d   81 (99)
T d1p3ha_           3 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKY-N   81 (99)
T ss_dssp             CEEEECTTEEEEEECCCCCBCTTSCBCCCSSCCSEEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEE-T
T ss_pred             ccceEcCCEEEEEEcchhcccccceEeccccccCceEEEEEEECCceEcCCCCEecCCeeecCCEEEEcccCceEEEE-C
Confidence            4799999999999999999999999999999999999999999999998775 5678899999999999999999997 9


Q ss_pred             CeEEEEEeCCceEEEeC
Q 025388          237 GTNYIALRASEVMAVLS  253 (253)
Q Consensus       237 g~~y~vlr~~DIlAvi~  253 (253)
                      |++|++++++||||+|+
T Consensus        82 g~~y~ii~e~dIlavi~   98 (99)
T d1p3ha_          82 GEEYLILSARDVLAVVS   98 (99)
T ss_dssp             TEEEEEEEGGGEEEEEE
T ss_pred             CEEEEEEEHHHEEEEEe
Confidence            99999999999999985

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=3.7e-31  Score=205.65  Aligned_cols=94  Identities=43%  Similarity=0.758  Sum_probs=89.5

Q ss_pred             eeceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCC--eeeeeeeeCCcEEEeccCCceEEEEc
Q 025388           59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA--KLDISVKVPGTQVIYSKYAGTELEFN  136 (253)
Q Consensus        59 ~~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~--~~p~~Vkv~GD~Vl~~ky~G~ev~~~  136 (253)
                      ++|+||+|||||++.+.+++|+|||+||++++++++.|+|+|||+|+...++  .+|++||+ ||+|+|++|+|++|++|
T Consensus         3 m~ikPlgdrVLVk~~~~~~kT~gGIiLp~~~~~~~~~G~VvavG~g~~~~~~~~~~~~~vk~-GD~Vl~~~~~g~~v~~d   81 (99)
T d1p3ha_           3 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAE-GDTVIYSKYGGTEIKYN   81 (99)
T ss_dssp             CEEEECTTEEEEEECCCCCBCTTSCBCCCSSCCSEEEEEEEEECCCEECSSSSCEECCSCCT-TCEEEEECTTCEEEEET
T ss_pred             ccceEcCCEEEEEEcchhcccccceEeccccccCceEEEEEEECCceEcCCCCEecCCeeec-CCEEEEcccCceEEEEC
Confidence            7899999999999999999999999999999999999999999999986654  47899999 99999999999999999


Q ss_pred             CeeeeEEeecceeeeec
Q 025388          137 GANHLILREDDVVGILE  153 (253)
Q Consensus       137 g~~~~llre~DIlaii~  153 (253)
                      |++|++++++||+|+++
T Consensus        82 g~~y~ii~e~dIlavi~   98 (99)
T d1p3ha_          82 GEEYLILSARDVLAVVS   98 (99)
T ss_dssp             TEEEEEEEGGGEEEEEE
T ss_pred             CEEEEEEEHHHEEEEEe
Confidence            99999999999999986

>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.1e-30  Score=201.87  Aligned_cols=95  Identities=40%  Similarity=0.644  Sum_probs=88.1

Q ss_pred             eeceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCC-eeeeeeeeCCcEEEeccCCce-EEEEc
Q 025388           59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKVPGTQVIYSKYAGT-ELEFN  136 (253)
Q Consensus        59 ~~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~-~~p~~Vkv~GD~Vl~~ky~G~-ev~~~  136 (253)
                      |+|+||+|||||++.+.+++|+|||+||++++++++.|+|+|||+|....++ .+|+.||+ ||+|+|++|+|. .+++|
T Consensus         1 m~ikPlgdrVLVk~~~~e~kT~gGIiLp~~~~~~~~~g~VvavG~g~~~~~g~~~~~~vk~-GD~Vl~~~~~g~~~~~~d   79 (97)
T d1aono_           1 MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKV-GDIVIFNDGYGVKSEKID   79 (97)
T ss_dssp             CCEEECTTEEEEEECCTTCTTTTSSCCCCCCSCCCCEEEEEEECSBCCTTSSCCCBCSCCT-TCEEEECCCSSCEEEESS
T ss_pred             CCceEcCCEEEEEEcccccEecceEEECCccccCceeEEEEEEeeeEEccCCcCccccCCC-CCEEEEecccCceEEEEC
Confidence            6899999999999999999999999999999999999999999999987665 47899999 999999998775 57899


Q ss_pred             CeeeeEEeecceeeeecc
Q 025388          137 GANHLILREDDVVGILET  154 (253)
Q Consensus       137 g~~~~llre~DIlaii~t  154 (253)
                      |++|++++++||||+++.
T Consensus        80 g~~y~ii~e~dIlavie~   97 (97)
T d1aono_          80 NEEVLIMSESDILAIVEA   97 (97)
T ss_dssp             SCEEEEEETTTEEEEECC
T ss_pred             CEEEEEEEHHHEEEEEeC
Confidence            999999999999999973

>d1we3o_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=1e-30  Score=201.98  Aligned_cols=94  Identities=48%  Similarity=0.831  Sum_probs=89.2

Q ss_pred             eeceecCCeEEEEecccccccceeEEecCCCCCCCcceeEEEEcCceecCCC-eeeeeeeeCCcEEEeccCCceEEEEcC
Q 025388           59 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKVPGTQVIYSKYAGTELEFNG  137 (253)
Q Consensus        59 ~~lkPL~DRVLVk~~e~e~kT~gGI~LP~sa~~k~~~G~VVAVG~G~~~~~~-~~p~~Vkv~GD~Vl~~ky~G~ev~~~g  137 (253)
                      ++|+||+|||||++.+++++|+||||||++++++++.|+|+|+|+|+...++ .+|+.+++ ||+|+|++|+|++|++||
T Consensus         2 ~~ikPlgdrVLVk~~~~~~kT~gGIiLp~~~~~k~~~g~VvavG~g~~~~~g~~~p~~vkv-GD~Vl~~~~~g~~v~~~g   80 (96)
T d1we3o_           2 TVIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKE-GDIVVFAKYGGTEIEIDG   80 (96)
T ss_dssp             CCEEECTTCEEEEECCCCSSCTTCCCCCTTTSCCCSEEEESCCCCCEECTTSCEECCSCCT-TCEEEECTTCSEEEECSS
T ss_pred             CcceEcCCEEEEEEccccceecccEEecccccccceEEEEeeecceEecCCCCEEEeeEEe-CCEEEEccCCCcEEEECC
Confidence            5799999999999999999999999999999999999999999999986655 47999999 999999999999999999


Q ss_pred             eeeeEEeecceeeeec
Q 025388          138 ANHLILREDDVVGILE  153 (253)
Q Consensus       138 ~~~~llre~DIlaii~  153 (253)
                      ++|++++++||||+++
T Consensus        81 ~~y~ii~e~dIlavie   96 (96)
T d1we3o_          81 EEYVILSERDLLAVLQ   96 (96)
T ss_dssp             CEEEEECTTTEEEEEC
T ss_pred             EEEEEEEHHHEEEEeC
Confidence            9999999999999985

>d1g31a_ b.35.1.1 (A:) GP31 co-chaperonin {Bacteriophage T4 [TaxId: 10665]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: GP31 co-chaperonin
species: Bacteriophage T4 [TaxId: 10665]

Probab=95.40  E-value=0.0073  Score=45.73  Aligned_cols=63  Identities=21%  Similarity=0.321  Sum_probs=48.5

Q ss_pred             eeeecCCeEEEEEec----ccccccceEEeeccc-cCCCceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCC
Q 025388          159 DLKPLNDRVFIKVAE----AEETTAGGLLLTEAS-KEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYA  228 (253)
Q Consensus       159 ~ikPL~DRVLVk~~e----~e~kT~gGIiLp~sa-~ek~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kya  228 (253)
                      .|+-+++.|++....    .|.+|.+||+|-... -|-|..|+|++||+....+       -.|+||.|+.+.-.
T Consensus         4 ~ika~~e~VI~~~~aa~aGdEi~S~~Giiig~r~qgeiPl~~~viSVG~dVpe~-------~~kvG~~vlLP~G~   71 (107)
T d1g31a_           4 PIRAVGEYVILVSEPAQAGDEEVTESGLIIGKRVQGEVPELCVVHSVGPDVPEG-------FCEVGDLTSLPVGQ   71 (107)
T ss_dssp             SCEECTTEEEEEECSSCGGGCTTSCTTCCCCHHHHHHSEEEEEEEEECTTSCTT-------SCCTTCEEEEEGGG
T ss_pred             CccccccEEEEEeccccCCceeecccceEEEeccCCCCceeEEEEEeCCCCCHH-------HhccccEEEccCCc
Confidence            477889999887764    367999999996443 3678999999999976322       46899999998643

>d1g31a_ b.35.1.1 (A:) GP31 co-chaperonin {Bacteriophage T4 [TaxId: 10665]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: GP31 co-chaperonin
species: Bacteriophage T4 [TaxId: 10665]

Probab=95.02  E-value=0.005  Score=46.64  Aligned_cols=61  Identities=25%  Similarity=0.378  Sum_probs=47.0

Q ss_pred             eceecCCeEEEEeccc----ccccceeEEecCCCC-CCCcceeEEEEcCceecCCCeeeeeeeeCCcEEEecc
Q 025388           60 SIKPLGDRVLVKIKTV----EEKTDGGIFLPSAAQ-TKPQAGEVVAVGEGKTVGKAKLDISVKVPGTQVIYSK  127 (253)
Q Consensus        60 ~lkPL~DRVLVk~~e~----e~kT~gGI~LP~sa~-~k~~~G~VVAVG~G~~~~~~~~p~~Vkv~GD~Vl~~k  127 (253)
                      .|+-+++.|++....+    |.+|.+||+|-...+ +-|..|+|++||+....+      -.|+ ||.|+.+.
T Consensus         4 ~ika~~e~VI~~~~aa~aGdEi~S~~Giiig~r~qgeiPl~~~viSVG~dVpe~------~~kv-G~~vlLP~   69 (107)
T d1g31a_           4 PIRAVGEYVILVSEPAQAGDEEVTESGLIIGKRVQGEVPELCVVHSVGPDVPEG------FCEV-GDLTSLPV   69 (107)
T ss_dssp             SCEECTTEEEEEECSSCGGGCTTSCTTCCCCHHHHHHSEEEEEEEEECTTSCTT------SCCT-TCEEEEEG
T ss_pred             CccccccEEEEEeccccCCceeecccceEEEeccCCCCceeEEEEEeCCCCCHH------Hhcc-ccEEEccC
Confidence            4678899999977653    789999999954333 468899999999986322      3567 99999875

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=83.93  E-value=0.54  Score=35.37  Aligned_cols=42  Identities=29%  Similarity=0.453  Sum_probs=27.7

Q ss_pred             ceeEEEEecCCccCCCCCeeeecCCCCCEEEecCCC-CeEEEecCCeEEEEEeCCceE
Q 025388          193 SIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYA-GNDFKGSDGTNYIALRASEVM  249 (253)
Q Consensus       193 ~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~kya-G~ev~~~dg~~y~vlr~~DIl  249 (253)
                      ..|+|+++|++..         .+++||+|.|.... |.      =.+|.++..+.++
T Consensus        64 ~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~------~ae~~~v~~~~~~  106 (147)
T d1qora1          64 AAGIVSKVGSGVK---------HIKAGDRVVYAQSALGA------YSSVHNIIADKAA  106 (147)
T ss_dssp             EEEEEEEECTTCC---------SCCTTCEEEESCCSSCC------SBSEEEEEGGGEE
T ss_pred             cccceeeeeeecc---------cccccceeeeecccccc------ceeEEEEehHHeE
Confidence            5899999999752         48999999864322 10      1356666555543

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=82.18  E-value=0.72  Score=34.61  Aligned_cols=40  Identities=28%  Similarity=0.439  Sum_probs=27.3

Q ss_pred             cceeEEEEcCceecCCCeeeeeeeeCCcEEEecc--CCceEEEEcCeeeeEEeecce
Q 025388           94 QAGEVVAVGEGKTVGKAKLDISVKVPGTQVIYSK--YAGTELEFNGANHLILREDDV  148 (253)
Q Consensus        94 ~~G~VVAVG~G~~~~~~~~p~~Vkv~GD~Vl~~k--y~G~ev~~~g~~~~llre~DI  148 (253)
                      ..|+|+++|++..        .+++ ||+|+|..  +++      -.+|..+..+..
T Consensus        64 ~~G~V~~vG~~v~--------~~~v-GdrV~~~~~~~G~------~ae~~~v~~~~~  105 (147)
T d1qora1          64 AAGIVSKVGSGVK--------HIKA-GDRVVYAQSALGA------YSSVHNIIADKA  105 (147)
T ss_dssp             EEEEEEEECTTCC--------SCCT-TCEEEESCCSSCC------SBSEEEEEGGGE
T ss_pred             cccceeeeeeecc--------cccc-cceeeeecccccc------ceeEEEEehHHe
Confidence            5899999999863        4789 99998743  322      135666655543

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.17  E-value=0.65  Score=35.20  Aligned_cols=43  Identities=23%  Similarity=0.335  Sum_probs=29.1

Q ss_pred             CceeEEEEecCCccCCCCCeeeecCCCCCEEEecC-CCCeEEEecCCeEEEEEeCCceE
Q 025388          192 PSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSK-YAGNDFKGSDGTNYIALRASEVM  249 (253)
Q Consensus       192 ~~~G~VVAVGpG~~~~~G~~~p~~Vk~GD~Vlf~k-yaG~ev~~~dg~~y~vlr~~DIl  249 (253)
                      ...|+|+++|++..         .+++||+|+... ..|.   +   .+|++++++.++
T Consensus        67 e~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~---~---ae~~~v~~~~~~  110 (150)
T d1yb5a1          67 DVAGVIEAVGDNAS---------AFKKGDRVFTSSTISGG---Y---AEYALAADHTVY  110 (150)
T ss_dssp             CEEEEEEEECTTCT---------TCCTTCEEEESCCSSCS---S---BSEEEEEGGGEE
T ss_pred             ceeeeeEeecceee---------ccccCcccccccccccc---c---cccccccccccc
Confidence            36899999999752         489999997542 2221   1   367777766554

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=80.28  E-value=0.31  Score=37.72  Aligned_cols=24  Identities=25%  Similarity=0.346  Sum_probs=19.3

Q ss_pred             cceeEEEEcCceecCCCeeeeeeeeCCcEEEec
Q 025388           94 QAGEVVAVGEGKTVGKAKLDISVKVPGTQVIYS  126 (253)
Q Consensus        94 ~~G~VVAVG~G~~~~~~~~p~~Vkv~GD~Vl~~  126 (253)
                      ..|+|+++|++..        .+++ ||+|...
T Consensus        70 ~~G~V~~~g~~v~--------~~~~-GdrV~~~   93 (177)
T d1jvba1          70 IAGKIEEVGDEVV--------GYSK-GDLVAVN   93 (177)
T ss_dssp             EEEEEEEECTTCC--------SCCT-TCEEEEC
T ss_pred             EEEEEeeeccCcc--------cccc-CceEeee
Confidence            4799999998753        4788 9999754