Citrus Sinensis ID: 025491

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250--
MASNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGPETERHWGLFAPDKQPKYQVNFN
ccccHHHHHHHHHHHcccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHccccEEEEccccEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHccccccccccccEEEEEEEEcccccccccccccEEcccccccEEEEcccc
ccccHHHHHHHHHHHcHHcccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEHHHEEEcccHHHcEEcHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHccccccHHHHHcccccccEEEcccEEccHHHHHHHHHHHHHHHcccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHcEccEcccccEEEEccEccccccccHHHHccccEcccccEccccccc
MASNQAEANTWVQDNVQNFANNVKFKYIAvgneakpgddyaQYLVPAMRNIQNAINGASLGSQIKVSTAIELgaldassppsagsfkqdykpiLDPLIAFlnennspllvnlypyfaiagdrnvpldfalfsaqqpvvsdpplsyLNLFYAQLDATYAALEKagggsldivisesgwptaggdgaltnvdnartYNNNLIQHvkqgspkkprpiETYIFAMFdengktgpeterhwglfapdkqpkyqvnfn
masnqaeantwvqdnVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIqhvkqgspkkprPIETYIFAMFDENGKTGPETERHwglfapdkqpkyqvnfn
MASNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGPETERHWGLFAPDKQPKYQVNFN
*********TWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGA**************DYKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQH***********IETYIFAMFD************WGL**************
***NQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGPETERHWGLFAPDKQPKYQVNFN
*********TWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGPETERHWGLFAPDKQPKYQVNFN
**SNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGPETERHWGLFAPDKQPKYQVNFN
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MASNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGDRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGPETERHWGLFAPDKQPKYQVNFN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query252 2.2.26 [Sep-21-2011]
P52408350 Glucan endo-1,3-beta-gluc N/A no 0.984 0.708 0.641 1e-87
Q03773347 Glucan endo-1,3-beta-gluc no no 0.988 0.717 0.609 5e-83
P36401339 Glucan endo-1,3-beta-gluc N/A no 0.988 0.734 0.605 1e-81
P33157339 Glucan endo-1,3-beta-gluc no no 0.972 0.722 0.586 3e-76
A7PQW3344 Glucan endo-1,3-beta-gluc no no 0.956 0.700 0.591 2e-72
P23431365 Glucan endo-1,3-beta-gluc N/A no 0.984 0.679 0.549 1e-71
P07979370 Lichenase OS=Nicotiana pl N/A no 0.984 0.670 0.558 5e-71
P15797371 Glucan endo-1,3-beta-gluc N/A no 0.984 0.668 0.545 1e-70
P27666370 Glucan endo-1,3-beta-gluc N/A no 0.984 0.670 0.545 2e-70
P23546370 Glucan endo-1,3-beta-gluc N/A no 0.984 0.670 0.541 5e-70
>sp|P52408|E13B_PRUPE Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1 Back     alignment and function desciption
 Score =  322 bits (826), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 163/254 (64%), Positives = 199/254 (78%), Gaps = 6/254 (2%)

Query: 1   MASNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASL 60
           +A +QA AN WVQ+NV+N+AN VKFKYIAVGNE KP D +AQ+LVPAMRNIQ AI+ A L
Sbjct: 101 IALSQANANAWVQNNVRNYAN-VKFKYIAVGNEVKPSDSFAQFLVPAMRNIQEAISLAGL 159

Query: 61  GSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAG 120
             +IKVSTAI+ G L  + PPS GSFK +Y  +L P+I FL  + SPLLVNLYPYFA +G
Sbjct: 160 AKKIKVSTAIDTGVLGETFPPSIGSFKSEYNALLYPIIRFLVSHQSPLLVNLYPYFAYSG 219

Query: 121 D-RNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPT 179
           + +++ LD+ALF+A   VV D    Y NLF A LD  YAALEKAGGGSL +VISE+GWP+
Sbjct: 220 NTQDIRLDYALFTAPSVVVQDGNFGYRNLFDAMLDGVYAALEKAGGGSLKVVISETGWPS 279

Query: 180 AGGDGALTNVDNARTYNNNLIQHVKQGSPKKP-RPIETYIFAMFDENGKTGPETERHWGL 238
           A G    T +DNART+ +NLIQHVK+G+P++P RPIETYIFAMFDEN KT PE E+HWGL
Sbjct: 280 AAGTA--TTIDNARTFISNLIQHVKEGTPRRPGRPIETYIFAMFDENRKT-PELEKHWGL 336

Query: 239 FAPDKQPKYQVNFN 252
           F+P KQPKYQ++FN
Sbjct: 337 FSPTKQPKYQISFN 350
Is thought to be an important plant defense-related product against fungal pathogens.
Prunus persica (taxid: 3760)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 9
>sp|Q03773|E13A_SOYBN Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1 Back     alignment and function description
>sp|P36401|E13H_TOBAC Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1 Back     alignment and function description
>sp|P33157|E13A_ARATH Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Arabidopsis thaliana GN=BG2 PE=1 SV=2 Back     alignment and function description
>sp|A7PQW3|E13B_VITVI Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera GN=VIT_06s0061g00120 PE=1 SV=2 Back     alignment and function description
>sp|P23431|E13B_NICPL Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1 Back     alignment and function description
>sp|P07979|GUB_NICPL Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3 Back     alignment and function description
>sp|P15797|E13B_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2 Back     alignment and function description
>sp|P27666|E13F_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|P23546|E13E_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query252
147667132337 beta-1,3-glucanase [Citrus unshiu] 1.0 0.747 0.892 1e-128
2274915336 beta-1,3-glucanase [Citrus sinensis] 1.0 0.75 0.845 1e-121
63333659336 beta-1,3-glucanase class III [Citrus cle 0.988 0.741 0.858 1e-118
256372804346 beta-1,3-glucanase [Malus hupehensis] 0.984 0.716 0.685 4e-92
313600351346 beta-1,3-glucanase [Malus hupehensis] 0.984 0.716 0.681 3e-91
261942365341 glucanase [Litchi chinensis] 0.980 0.724 0.662 8e-87
16903144343 beta-1,3-glucanase [Prunus persica] 0.976 0.717 0.661 4e-86
16903142350 beta-1,3-glucanase [Prunus persica] 0.984 0.708 0.641 5e-86
320090193343 1,3-beta-D-glucanase GH17_101 [Populus t 0.976 0.717 0.645 6e-86
6960214343 beta-1,3 glucanase [Populus tremula x Po 0.976 0.717 0.645 6e-86
>gi|147667132|gb|ABQ45848.1| beta-1,3-glucanase [Citrus unshiu] Back     alignment and taxonomy information
 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 225/252 (89%), Positives = 233/252 (92%)

Query: 1   MASNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASL 60
           +ASNQAEANTWVQDNVQNF NNVKFKYIAVGNEAKPGDD+AQYLVPAMRNIQNAINGA+L
Sbjct: 86  IASNQAEANTWVQDNVQNFVNNVKFKYIAVGNEAKPGDDFAQYLVPAMRNIQNAINGANL 145

Query: 61  GSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAG 120
           GSQIKVSTAI  GALD SSPPSAGSF QDY+PILDPLI FLNENNSPLLVNLYPYFAI G
Sbjct: 146 GSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNENNSPLLVNLYPYFAIVG 205

Query: 121 DRNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPTA 180
           DR + LD+ALF +QQPVVSDPPLSY NLF AQLDATYAALEKAGGGSLDIVISE GWPTA
Sbjct: 206 DRQISLDYALFRSQQPVVSDPPLSYQNLFDAQLDATYAALEKAGGGSLDIVISERGWPTA 265

Query: 181 GGDGALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDENGKTGPETERHWGLFA 240
           GGDGALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDE  K G E ERHWGLF+
Sbjct: 266 GGDGALTNVDNARTYNNNLIQHVKQGSPKKPRPIETYIFAMFDEKDKKGDEIERHWGLFS 325

Query: 241 PDKQPKYQVNFN 252
           PDKQ KYQVNFN
Sbjct: 326 PDKQTKYQVNFN 337

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|2274915|emb|CAA03908.1| beta-1,3-glucanase [Citrus sinensis] Back     alignment and taxonomy information
>gi|63333659|gb|AAY40462.1| beta-1,3-glucanase class III [Citrus clementina x Citrus reticulata] Back     alignment and taxonomy information
>gi|256372804|gb|ACU78080.1| beta-1,3-glucanase [Malus hupehensis] Back     alignment and taxonomy information
>gi|313600351|gb|ADR71671.1| beta-1,3-glucanase [Malus hupehensis] Back     alignment and taxonomy information
>gi|261942365|gb|ACY06774.1| glucanase [Litchi chinensis] Back     alignment and taxonomy information
>gi|16903144|gb|AAL30426.1|AF435089_1 beta-1,3-glucanase [Prunus persica] Back     alignment and taxonomy information
>gi|16903142|gb|AAL30425.1|AF435088_1 beta-1,3-glucanase [Prunus persica] Back     alignment and taxonomy information
>gi|320090193|gb|ADW08746.1| 1,3-beta-D-glucanase GH17_101 [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|6960214|gb|AAF33405.1|AF230109_1 beta-1,3 glucanase [Populus tremula x Populus alba] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query252
TAIR|locus:2082568340 BG1 ""beta-1,3-glucanase 1"" [ 0.988 0.732 0.582 7.9e-78
TAIR|locus:2082518341 BG3 ""beta-1,3-glucanase 3"" [ 0.968 0.715 0.594 7.3e-75
TAIR|locus:2082543339 BGL2 ""beta-1,3-glucanase 2"" 0.972 0.722 0.586 1.9e-74
TAIR|locus:2130329344 AT4G16260 [Arabidopsis thalian 0.976 0.715 0.484 7.1e-61
TAIR|locus:2164991 506 AT5G56590 [Arabidopsis thalian 0.988 0.492 0.419 8.3e-51
TAIR|locus:2161710 465 AT5G55180 [Arabidopsis thalian 0.992 0.537 0.407 7.7e-48
TAIR|locus:2149209344 AT5G20390 [Arabidopsis thalian 0.968 0.709 0.401 8.8e-47
TAIR|locus:2165432438 AT5G42720 [Arabidopsis thalian 0.984 0.566 0.440 1e-45
TAIR|locus:2037905426 AT1G32860 [Arabidopsis thalian 0.972 0.575 0.412 2.1e-45
TAIR|locus:2038583392 AT2G27500 [Arabidopsis thalian 0.984 0.632 0.383 2.7e-45
TAIR|locus:2082568 BG1 ""beta-1,3-glucanase 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
 Identities = 148/254 (58%), Positives = 193/254 (75%)

Query:     1 MASNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASL 60
             +AS+Q++AN WVQ  V N+AN V+F+YI+VGNE K  D YAQ+LVPAM NI  A+  A L
Sbjct:    88 VASSQSQANAWVQTYVMNYANGVRFRYISVGNEVKISDSYAQFLVPAMENIDRAVLAAGL 147

Query:    61 GSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAG 120
             G +IKVST++++G L  S PPS GSF+ D   +++P+I FL   NSPLL+NLY YF+ AG
Sbjct:   148 GGRIKVSTSVDMGVLRESYPPSKGSFRGDVMVVMEPIIRFLVSKNSPLLLNLYTYFSYAG 207

Query:   121 D-RNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPT 179
             +   + LD+ALF+A   +VSDPP SY NLF A LDA Y+ALEK+GG SL+IV++E+GWPT
Sbjct:   208 NVGQIRLDYALFTAPSGIVSDPPRSYQNLFDAMLDAMYSALEKSGGASLEIVVAETGWPT 267

Query:   180 AGGDGALTNVDNARTYNNNLIQHVKQGSPKKP-RPIETYIFAMFDENGK-TGPETERHWG 237
              GG    TN++NAR YNNNLI+HVK G+PK+P + IETY+FA++DEN K T P  E+ WG
Sbjct:   268 GGGTD--TNIENARIYNNNLIKHVKNGTPKRPGKEIETYLFAIYDENQKPTPPYVEKFWG 325

Query:   238 LFAPDKQPKYQVNF 251
             LF P+KQPKY +NF
Sbjct:   326 LFYPNKQPKYDINF 339
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
TAIR|locus:2082518 BG3 ""beta-1,3-glucanase 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082543 BGL2 ""beta-1,3-glucanase 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130329 AT4G16260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164991 AT5G56590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161710 AT5G55180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149209 AT5G20390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165432 AT5G42720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037905 AT1G32860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038583 AT2G27500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P52396E13I_TOBAC3, ., 2, ., 1, ., 3, 90.50980.95630.8763N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.390.946
3rd Layer3.2.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query252
pfam00332310 pfam00332, Glyco_hydro_17, Glycosyl hydrolases fam 1e-113
COG5309305 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohyd 0.004
>gnl|CDD|215863 pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 Back     alignment and domain information 
 Score =  327 bits (840), Expect = e-113
 Identities = 138/252 (54%), Positives = 181/252 (71%), Gaps = 6/252 (2%)

Query: 2   ASNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLG 61
           A +Q+ A +WVQDNV+ +A  VK +YIAVGNE  PG     +LVPAMRNI+NA+  A LG
Sbjct: 63  AGSQSNAASWVQDNVRPYAPKVKIRYIAVGNEVSPGTT-QSFLVPAMRNIRNALTAAGLG 121

Query: 62  SQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGD 121
           ++IKVST++    L  S PPS GSF+ + +  +DP+I FL   N+PLL N+YPYFA + +
Sbjct: 122 NKIKVSTSVRFDILGNSFPPSYGSFRVETRSFMDPIIVFLAGTNAPLLANVYPYFAYSNN 181

Query: 122 -RNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPTA 180
            R++ L++ALF      V D  L Y NLF A +DA YAALEKAGG S+++V+SESGWP+ 
Sbjct: 182 PRDISLNYALFQPGT-TVVDGGLGYQNLFDAMVDAVYAALEKAGGPSVEVVVSESGWPSD 240

Query: 181 GGDGALTNVDNARTYNNNLIQHVKQGSPKKP-RPIETYIFAMFDENGKTGPETERHWGLF 239
           GG  A   ++NARTYN NLI HVK+G+PK+P   IETY+FAMFDEN K G   E+H+GLF
Sbjct: 241 GGFAA--TIENARTYNQNLINHVKKGTPKRPGWAIETYVFAMFDENQKPGESVEKHFGLF 298

Query: 240 APDKQPKYQVNF 251
            P+KQPKY ++F
Sbjct: 299 YPNKQPKYPIDF 310

Length = 310
>gnl|CDD|227625 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 252
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 100.0
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 100.0
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 98.48
PF11790239 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; 97.39
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 97.21
PRK10150604 beta-D-glucuronidase; Provisional 96.68
PF03198314 Glyco_hydro_72: Glucanosyltransferase; InterPro: I 96.16
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 95.77
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 94.41
PF00232455 Glyco_hydro_1: Glycosyl hydrolase family 1; InterP 89.01
TIGR03356427 BGL beta-galactosidase. 82.17
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information 
Probab=100.00  E-value=1.3e-73  Score=521.40  Aligned_cols=246  Identities=52%  Similarity=0.909  Sum_probs=205.8

Q ss_pred             CCCHHHHHHHHHHhccCCCCCceEEEEEecccccCCCCCHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCC
Q 025491            2 ASNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPP   81 (252)
Q Consensus         2 a~~~~~a~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pP   81 (252)
                      |+++..|..||++||.||+|.++|++|+||||++...... .|+|+|+++|++|+++||+++|||+|+++++++.++|||
T Consensus        63 a~~~~~A~~Wv~~nv~~~~~~~~i~~i~VGnEv~~~~~~~-~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PP  141 (310)
T PF00332_consen   63 ASSQSAAGSWVRTNVLPYLPAVNIRYIAVGNEVLTGTDNA-YLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPP  141 (310)
T ss_dssp             HHHHHHHHHHHHHHTCTCTTTSEEEEEEEEES-TCCSGGG-GHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSG
T ss_pred             ccCHHHHhhhhhhcccccCcccceeeeecccccccCccce-eeccHHHHHHHHHHhcCcCCcceeccccccccccccCCC
Confidence            5678899999999999999999999999999999865422 899999999999999999989999999999999999999


Q ss_pred             CCccccCCCcchhHHHHHHHHhcCCCceeccCccccccCC-CCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHH
Q 025491           82 SAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGD-RNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAAL  160 (252)
Q Consensus        82 s~~~f~~~~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~-~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~  160 (252)
                      |+|.|++++.++|+++++||.++++|||+|+||||.+..+ ..++|+||+|++++... |++++|+||||+|+|++++||
T Consensus       142 S~g~F~~~~~~~~~~~l~fL~~t~spf~vN~yPyfa~~~~~~~~~l~yAlf~~~~~~~-D~~~~y~nlfDa~~da~~~a~  220 (310)
T PF00332_consen  142 SAGVFRSDIASVMDPLLKFLDGTNSPFMVNVYPYFAYQNNPQNISLDYALFQPNSGVV-DGGLAYTNLFDAMVDAVYAAM  220 (310)
T ss_dssp             GG-EESHHHHHHHHHHHHHHHHHT--EEEE--HHHHHHHSTTTS-HHHHTT-SSS-SE-ETTEEESSHHHHHHHHHHHHH
T ss_pred             ccCcccccchhhhhHHHHHhhccCCCceeccchhhhccCCcccCCccccccccccccc-ccchhhhHHHHHHHHHHHHHH
Confidence            9999999988999999999999999999999999999988 89999999999887666 889999999999999999999


Q ss_pred             HHhCCCCCcEEEcccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCC-CceEEEEEeecCCCCCCCCCCCeeeee
Q 025491          161 EKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPR-PIETYIFAMFDENGKTGPETERHWGLF  239 (252)
Q Consensus       161 ~k~g~~~~~v~v~ETGWPs~G~~~a~as~~na~~y~~~l~~~~~~gtp~r~~-~~~~~~F~~fde~~K~g~~~E~~wGlf  239 (252)
                      +|+|+++++|+|+||||||+|+.  .++++||+.|++++++++.+|||+||+ ++++|||++|||+||+++.+|||||||
T Consensus       221 ~~~g~~~~~vvv~ETGWPs~G~~--~a~~~nA~~~~~nl~~~~~~gt~~~~~~~~~~y~F~~FdE~~K~~~~~E~~wGlf  298 (310)
T PF00332_consen  221 EKLGFPNVPVVVGETGWPSAGDP--GATPENAQAYNQNLIKHVLKGTPLRPGNGIDVYIFEAFDENWKPGPEVERHWGLF  298 (310)
T ss_dssp             HTTT-TT--EEEEEE---SSSST--TCSHHHHHHHHHHHHHHCCGBBSSSBSS---EEES-SB--TTSSSSGGGGG--SB
T ss_pred             HHhCCCCceeEEeccccccCCCC--CCCcchhHHHHHHHHHHHhCCCcccCCCCCeEEEEEEecCcCCCCCcccceeeeE
Confidence            99999999999999999999995  899999999999999999999999999 999999999999999987899999999


Q ss_pred             cCCCCceeeccc
Q 025491          240 APDKQPKYQVNF  251 (252)
Q Consensus       240 ~~~~~~ky~~~~  251 (252)
                      ++||++||+++|
T Consensus       299 ~~d~~~ky~~~f  310 (310)
T PF00332_consen  299 YPDGTPKYDLDF  310 (310)
T ss_dssp             -TTSSBSS----
T ss_pred             CCCCCeecCCCC
Confidence            999999999987

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR03356 BGL beta-galactosidase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query252
3em5_A316 Crystal Structure Of A Native Endo Beta-1,3-Glucana 4e-72
3ur7_A323 Higher-density Crystal Structure Of Potato Endo-1,3 5e-65
2cyg_A312 Crystal Structure At 1.45- Resolution Of The Major 1e-64
4gzi_A323 Active-site Mutant Of Potato Endo-1,3-beta-glucanas 3e-64
1aq0_A306 Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space G 7e-53
1ghs_A306 The Three-Dimensional Structures Of Two Plant Beta- 7e-52
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis Length = 316 Back     alignment and structure 
Iteration: 1

 Score =  267 bits (683), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 140/256 (54%), Positives = 184/256 (71%), Gaps = 9/256 (3%)
Query: 3   SNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDD----YAQYLVPAMRNIQNAINGA 58
           +N + A +WVQ NV+ F ++V+F+YIAVGNE  P +      AQ+++PAMRNI +AI  A
Sbjct: 64  TNPSNAKSWVQKNVRGFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSA 123
Query: 59  SLGSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAI 118
            L  QIKVSTAI+L  +  S PPSAG+F+ D +  L+P+I FL+   SPLL N+YPYF  
Sbjct: 124 GLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLNPIIRFLSSIRSPLLANIYPYFTY 183
Query: 119 AGD-RNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGW 177
           AG+ R++ L +ALF++   VV D    Y NLF A LDA Y+ALE+A GGSL++V+SESGW
Sbjct: 184 AGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEVVVSESGW 243
Query: 178 PTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKP-RPIETYIFAMFDENGKTGPETERHW 236
           P+AG   A    DN RTY +NLIQHVK+G+PK+P R IETY+FAMFDEN K  PE E+H+
Sbjct: 244 PSAGAFAA--TFDNGRTYLSNLIQHVKRGTPKRPKRAIETYLFAMFDENKKQ-PEVEKHF 300
Query: 237 GLFAPDKQPKYQVNFN 252
           GLF P+K  KY +NF+
Sbjct: 301 GLFFPNKWQKYNLNFS 316
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase Length = 323 Back     alignment and structure
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome Length = 312 Back     alignment and structure
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose Length = 323 Back     alignment and structure
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group Length = 306 Back     alignment and structure
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities Length = 306 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query252
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 4e-84
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 2e-81
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 7e-80
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 1e-77
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 2e-73
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312 Back     alignment and structure
 Score =  252 bits (645), Expect = 4e-84
 Identities = 130/253 (51%), Positives = 177/253 (69%), Gaps = 4/253 (1%)

Query: 1   MASNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASL 60
           +ASN + A  W++ NV  +  +V F+YIAVGNE  PG D AQY++PAMRNI NA++ A L
Sbjct: 62  LASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGL 121

Query: 61  GSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAG 120
            +QIKVSTA++ G L  S PPSAG+F    +  L P++ FL  N +PLLVN+YPYF+  G
Sbjct: 122 QNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSYTG 181

Query: 121 D-RNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPT 179
           +   + L +ALF+A   VV D   SY NLF A +DA +AALE+ GG ++ +V+SESGWP+
Sbjct: 182 NPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSESGWPS 241

Query: 180 AGGDGALTNVDNARTYNNNLIQHVKQGSPKKP-RPIETYIFAMFDENGKTGPETERHWGL 238
           AGG     +  NA+TYN NLI+HV  G+P++P + IE YIF MF+EN K G   E+++GL
Sbjct: 242 AGGGAE-ASTSNAQTYNQNLIRHVGGGTPRRPGKEIEAYIFEMFNENQKAGG-IEQNFGL 299

Query: 239 FAPDKQPKYQVNF 251
           F P+KQP YQ++F
Sbjct: 300 FYPNKQPVYQISF 312
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306 Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306 Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316 Back     alignment and structure
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query252
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 100.0
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 100.0
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 100.0
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 100.0
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 100.0
2w61_A 555 GAS2P, glycolipid-anchored surface protein 2; glyc 99.52
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 99.28
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 99.25
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 98.97
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 98.36
4ekj_A 500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 98.36
1w91_A 503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 97.84
1uhv_A 500 Beta-xylosidase; family 39 glycoside hydrolase, xy 97.68
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 97.66
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 97.34
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 97.03
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 96.79
3cmg_A 667 Putative beta-galactosidase; structural genomics, 96.71
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 96.69
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 96.43
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 96.35
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 96.12
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 95.99
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 95.89
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 95.52
2d1z_A 436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 95.42
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 95.23
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 95.19
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 95.18
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 95.11
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 95.11
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 94.95
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 94.92
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 94.76
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 94.75
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 94.67
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 94.65
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 94.58
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 93.88
3fn9_A 692 Putative beta-galactosidase; structural genomics, 93.76
4aw7_A 591 GH86A beta-porphyranase; hydrolase, porphyran-hexa 93.6
3icg_A 515 Endoglucanase D; cellulase, xylanase, carbohydrate 93.35
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 92.48
3vny_A 488 Beta-glucuronidase; TIM barrel, greek-KEY, glycosi 92.31
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 91.77
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 91.06
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 91.0
1qw9_A 502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 90.97
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 90.64
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 89.09
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 88.61
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 88.61
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 88.49
2c7f_A 513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 87.93
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 87.17
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 86.87
4f8x_A335 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 86.81
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 86.01
3clw_A507 Conserved exported protein; structural genomics, u 85.26
2wnw_A447 Activated by transcription factor SSRB; hydrolase, 84.26
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 84.24
3vii_A487 Beta-glucosidase; cellulases, glycosyl hydrolase, 84.18
2v3g_A283 Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich 84.02
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 83.87
2nt0_A497 Glucosylceramidase; cerezyme, glucocerebrosidase, 83.53
4b3l_A479 Beta-glucosidase; hydrolase, glycosidase, carbohyd 82.71
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 82.21
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 82.21
3ij6_A312 Uncharacterized metal-dependent hydrolase; structu 81.25
3emz_A331 Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba 81.22
1wky_A 464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 81.01
3apg_A473 Beta-glucosidase; TIM barrel, hydrolase, sugar bin 80.15
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
Probab=100.00  E-value=1.6e-82  Score=578.67  Aligned_cols=246  Identities=56%  Similarity=0.957  Sum_probs=238.1

Q ss_pred             CHHHHHHHHHHhccCCCCCceEEEEEecccccCCCC-C---HHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccC
Q 025491            4 NQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDD-Y---AQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASS   79 (252)
Q Consensus         4 ~~~~a~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~-~---~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~   79 (252)
                      +++.|.+||++||.+|+|+++|++|+||||+|.+++ .   ++.|+|+|++||++|+++||+++|||||++++++|.+||
T Consensus        65 ~~~~A~~WV~~nV~~y~p~~~I~~IaVGNEvl~~~~~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~vl~~s~  144 (316)
T 3em5_A           65 NPSNAKSWVQKNVRGFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSY  144 (316)
T ss_dssp             SHHHHHHHHHHHTGGGTTTSCEEEEEEEESCCTTCTTTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTSEEECS
T ss_pred             CHHHHHHHHHHhhhhcCCCceEEEEEEecccccCCCccccCHHHHHHHHHHHHHHHHHCCCCCceEEEecccccccccCC
Confidence            788999999999999999999999999999999876 4   899999999999999999998899999999999999999


Q ss_pred             CCCCccccCCCcchhHHHHHHHHhcCCCceeccCccccccCC-CCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHH
Q 025491           80 PPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGD-RNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYA  158 (252)
Q Consensus        80 pPs~~~f~~~~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~-~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~  158 (252)
                      |||+|.|++++.++|+|||+||.+++||||+|+||||++..+ ++|+|+||||++.+.++.|++++|+||||+|+|++++
T Consensus       145 pPS~g~F~~~~~~~~~pil~fL~~~~sp~~vN~YPyf~~~~~~~~i~l~yAlf~~~~~~~~~~~~~Y~nlfDa~~Da~~~  224 (316)
T 3em5_A          145 PPSAGAFRDDVRSYLNPIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLDALYS  224 (316)
T ss_dssp             SGGGCEECGGGHHHHHHHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHTTCCSSCSEEETTEEECSHHHHHHHHHHH
T ss_pred             CCCCceechhHHHHHHHHHHHHHhcCCeeEeecchhhhccCCCCCcCchhhcccCCCcccCCCCccHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999877 8999999999998888999999999999999999999


Q ss_pred             HHHHhCCCCCcEEEcccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCC-CceEEEEEeecCCCCCCCCCCCeee
Q 025491          159 ALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPR-PIETYIFAMFDENGKTGPETERHWG  237 (252)
Q Consensus       159 a~~k~g~~~~~v~v~ETGWPs~G~~~a~as~~na~~y~~~l~~~~~~gtp~r~~-~~~~~~F~~fde~~K~g~~~E~~wG  237 (252)
                      ||+|+|+++++|+|+||||||+|+.  +||++||++|+++++||+++|||+||+ .+++|||++|||+||+ ++.|||||
T Consensus       225 Al~~~g~~~~~v~V~EtGWPs~G~~--~as~~na~~y~~~li~~~~~GTP~rp~~~~~~y~F~lfDe~~K~-~~~E~~~G  301 (316)
T 3em5_A          225 ALERASGGSLEVVVSESGWPSAGAF--AATFDNGRTYLSNLIQHVKRGTPKRPKRAIETYLFAMFDENKKQ-PEVEKHFG  301 (316)
T ss_dssp             HHHHTTCTTCCEEEEEECCCSSSST--TCCHHHHHHHHHHHHHHTTSCCSSSCSSCCCEEESCSBCCTTCS-SGGGGCCC
T ss_pred             HHHHcCCCCCceEeccccCCCCCCC--CCCHHHHHHHHHHHHHhccCCCCCCCCCCceEEEEEeecCCCCC-CCCCceee
Confidence            9999999999999999999999975  999999999999999999999999998 8999999999999998 78999999


Q ss_pred             eecCCCCceeecccC
Q 025491          238 LFAPDKQPKYQVNFN  252 (252)
Q Consensus       238 lf~~~~~~ky~~~~~  252 (252)
                      ||++|++|||+++|+
T Consensus       302 lf~~d~~~ky~l~~~  316 (316)
T 3em5_A          302 LFFPNKWQKYNLNFS  316 (316)
T ss_dssp             SBCTTSCBSSCCCCC
T ss_pred             EECCCCCEeecCCCC
Confidence            999999999999986
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} Back     alignment and structure
>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* Back     alignment and structure
>2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... Back     alignment and structure
>4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus} Back     alignment and structure
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 252
d2cyga1312 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana ( 1e-87
d1ghsa_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 3e-81
d1aq0a_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 4e-81
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

 Score =  260 bits (666), Expect = 1e-87
 Identities = 132/253 (52%), Positives = 179/253 (70%), Gaps = 4/253 (1%)

Query: 1   MASNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASL 60
           +ASN + A  W++ NV  +  +V F+YIAVGNE  PG D AQY++PAMRNI NA++ A L
Sbjct: 62  LASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGL 121

Query: 61  GSQIKVSTAIELGALDASSPPSAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAG 120
            +QIKVSTA++ G L  S PPSAG+F    +  L P++ FL  N +PLLVN+YPYF+  G
Sbjct: 122 QNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSYTG 181

Query: 121 D-RNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAALEKAGGGSLDIVISESGWPT 179
           +   + L +ALF+A   VV D   SY NLF A +DA +AALE+ GG ++ +V+SESGWP+
Sbjct: 182 NPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSESGWPS 241

Query: 180 AGGDGALTNVDNARTYNNNLIQHVKQGSPKKP-RPIETYIFAMFDENGKTGPETERHWGL 238
           AGG GA  +  NA+TYN NLI+HV  G+P++P + IE YIF MF+EN K G   E+++GL
Sbjct: 242 AGG-GAEASTSNAQTYNQNLIRHVGGGTPRRPGKEIEAYIFEMFNENQKAGG-IEQNFGL 299

Query: 239 FAPDKQPKYQVNF 251
           F P+KQP YQ++F
Sbjct: 300 FYPNKQPVYQISF 312
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query252
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 100.0
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 98.65
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 98.53
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 98.29
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 98.18
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 98.1
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 97.77
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 97.72
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 97.47
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 97.34
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 97.0
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 96.53
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 96.4
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 96.08
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 95.78
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 95.55
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 95.07
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 94.96
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 93.79
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 92.73
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 92.08
d2v3ga1273 Endoglucanase H N-terminal domain {Clostridium the 91.78
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 91.44
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 91.02
d2f6ka1306 Putative amidohydrolase LP2961 {Lactobacillus plan 90.63
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 90.27
d2j78a1443 Beta-glucosidase A {Thermotoga maritima [TaxId: 23 89.42
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 88.58
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 88.06
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 86.95
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 86.5
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 85.2
d1gnxa_464 Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] 84.24
d2nt0a2354 Glucosylceramidase, catalytic domain {Human (Homo 83.22
d1pbga_468 6-phospho-beta-D-galactosidase, PGAL {Lactococcus 82.07
d1wcga1462 Thioglucosidase {Cabbage aphid (Brevicoryne brassi 80.68
d1qw9a2367 Alpha-L-arabinofuranosidase, catalytic domain {Bac 80.42
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

Probab=100.00  E-value=4.5e-70  Score=495.47  Aligned_cols=248  Identities=53%  Similarity=0.926  Sum_probs=236.8

Q ss_pred             CCCHHHHHHHHHHhccCCCCCceEEEEEecccccCCCCCHHHHHHHHHHHHHHHHhCCCCCCeeEecccccccccccCCC
Q 025491            2 ASNQAEANTWVQDNVQNFANNVKFKYIAVGNEAKPGDDYAQYLVPAMRNIQNAINGASLGSQIKVSTAIELGALDASSPP   81 (252)
Q Consensus         2 a~~~~~a~~wv~~nv~~~~~~~~i~~I~VGNEvl~~~~~~~~L~~ai~~v~~aL~~~gl~~~I~VsT~~~~~~l~~s~pP   81 (252)
                      +++++.|++|++++|.+|++.++|++|+||||+|.+++....++|+|+++|++|+++|+.+.|++++++++.++..|+||
T Consensus        63 ~~~~~~a~~wv~~~v~~~~~~~~I~~IaVGNE~l~~~~~~~~~lpa~~~~~~aL~~~g~~~~i~~t~~~~~~~~~~s~p~  142 (312)
T d2cyga1          63 ASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPP  142 (312)
T ss_dssp             HHCTTHHHHHHHHHTGGGTTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGBSCCSSG
T ss_pred             cCCHHHHHHHHHHHHhccCCCceEEEEEecCEEeeCCcCchhhcccHHHHHHHHHHCCCCCCceeeeeeeeeccccCCCC
Confidence            46788999999999999999999999999999999877667789999999999999999999999999999999999999


Q ss_pred             CCccccCCCcchhHHHHHHHHhcCCCceeccCccccccCC-CCCCcccccccCCCCcccCCCcchhhHHHHHHHHHHHHH
Q 025491           82 SAGSFKQDYKPILDPLIAFLNENNSPLLVNLYPYFAIAGD-RNVPLDFALFSAQQPVVSDPPLSYLNLFYAQLDATYAAL  160 (252)
Q Consensus        82 s~~~f~~~~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~-~~~~l~~a~f~~~~~~~~~~~~~y~n~fda~~Da~~~a~  160 (252)
                      |++.|++++.+.|+++++||+.++|||++|+||||++..+ ..++++||+|++++..+.++++.|+|+||+|+|++++||
T Consensus       143 sa~~~~~~~~~~l~~~~~fl~~~~~~~~~n~ypy~~~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~~d~~~d~~~~a~  222 (312)
T d2cyga1         143 SAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSYTGNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAAL  222 (312)
T ss_dssp             GGCCBCHHHHHHHHHHHHHHHHHTCCEEEECCHHHHHHHSTTTSCHHHHHTCCCSCSEEETTEEECSHHHHHHHHHHHHH
T ss_pred             ccccccchhHHHHHHHHHHHHhcCCeeeEeccchhhhccCcccccchhhhccCCCccccccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999888 899999999999888888999999999999999999999


Q ss_pred             HHhCCCCCcEEEcccccCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCC-CceEEEEEeecCCCCCCCCCCCeeeee
Q 025491          161 EKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPR-PIETYIFAMFDENGKTGPETERHWGLF  239 (252)
Q Consensus       161 ~k~g~~~~~v~v~ETGWPs~G~~~a~as~~na~~y~~~l~~~~~~gtp~r~~-~~~~~~F~~fde~~K~g~~~E~~wGlf  239 (252)
                      +|+|+++++|+|+||||||+|+. +.|+++||++|++++++|+++|||+||+ ++++|+||+|||+||+| ++|||||||
T Consensus       223 ~~~g~~~~~ivI~EtGWPs~G~~-~~as~~na~~y~~~l~~~~~~gtp~~~~~~i~~f~FeaFDE~wK~G-~~E~~wGlf  300 (312)
T d2cyga1         223 ERVGGANVAVVVSESGWPSAGGG-AEASTSNAQTYNQNLIRHVGGGTPRRPGKEIEAYIFEMFNENQKAG-GIEQNFGLF  300 (312)
T ss_dssp             HTTTCTTCCEEEEEECCCSSSSS-TTSSHHHHHHHHHHHHHHGGGCCSSSCSSCCCEEESCSBCCTTSCS-SGGGCCCSB
T ss_pred             HHhCCCCCceEEecCCcccCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCCCCCccEEEEeEeCCCCCCC-CccCccccC
Confidence            99999999999999999999964 4799999999999999999999999999 99999999999999975 799999999


Q ss_pred             cCCCCceeeccc
Q 025491          240 APDKQPKYQVNF  251 (252)
Q Consensus       240 ~~~~~~ky~~~~  251 (252)
                      ++||++||+|+|
T Consensus       301 ~~d~~~ky~l~f  312 (312)
T d2cyga1         301 YPNKQPVYQISF  312 (312)
T ss_dssp             CTTSCBSSCCCC
T ss_pred             CCCCCEecCCCC
Confidence            999999999987
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} Back     information, alignment and structure
>d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure