Citrus Sinensis ID: 025570

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Protein Sequence
MEELPPGYRFFPTEEELVSFYLINKLEELCGEKCQGDTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARREEQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYSGEDHSDYPETNLDNNWNIVADPQPPLWDWEQLNWP
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHccccccccccEEEEccccccccccccccccccccccccccccccEEcccccEEEEEEccEEEccccccccccccEEEEEEcccccccccccccccccccEEEEEEEEEccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHHHHHHHHHHccccHHHccccccEEEEEcccccccccccccccHcccccEEEcccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEEccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccc
Coil and Loop (DISEMBL)
meelppgyrffpteeELVSFYLINKLEELcgekcqgdteqwffftprqereerggrpsrttasgywkatgspsyvyssdnrvigVKKTMVFykgkaptgrktkwKMHEYRAiegasnpssavipkLRHEFSLCRIyvksesfrafdrrpleaarreeqphgggattsapnnimvrgngsntsfqdaimcdgdvattsaqnnimgprasspetsysgedhsdypetnldnnwnivadpqpplwdweqlnwp
Flexible Loop (DISEMBL)
meelppgyrffpteEELVSFYLINKLEELCGEKCQGDTEQWFFFtprqereerggrpsrttasgywkatgspsyvyssdnrviGVKKTMvfykgkaptgrktkwKMHEYRAIegasnpssaviPKLRHEFSLCRiyvksesfrafdrrPLEAArreeqphgggattsapnniMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYSGEDHSDYPETNLDNNWNIVADPqpplwdweqlnwp
Low Complexity Region (SEG)
MEELPPGYRFFPTEEELVSFYLINKLEELCGEKCQGDTEQWFFFTPRQereerggrPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARREEQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYSGEDHSDYPETNLDNNWNIVADPQPPLWDWEQLNWP
Disordered region (IsUnstruct)
*******YRFFPTEEELVSFYLINKLEELCGEKCQGDTEQWFFFT*******************YWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIE*******AVIPKLRHEFSLCRIYVKSESFR*************************************************************************************NNWNIVADPQPPLWDWEQ****
Disordered Region (DISOPRED)
*EELPPGYRFFPTEEELVSFYLINKLEELCGEKCQGDTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAI****************EFSLCRIYVK******************************************************************************************************LWDWEQLNWP
Disordered Region (DISEMBL)
MEELPPGYRFFPTEEELVSFYLINKLEELCGEKCQGDTEQWFFFTPR**************ASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLE*************TTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPR**************DYPETNLDNNWNIVADPQPPLWDWEQLNWP
Disordered Region (DISPRO)
**ELPPGYRFFPTEEELVSFYLINKLEELCGEKCQGDTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEG*********PKLRHEFSLCRIYVKSE*************************************************************************************************QPPLWDWE*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEELPPGYRFFPTEEELVSFYLINKLEELCGEKCQGDTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARREEQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYSGEDHSDYPETNLDNNWNIVADPQPPLWDWEQLNWP
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	250	2.2.26 [Sep-21-2011]
Q9FMR3	235	NAC domain-containing pro	no	no	0.832	0.885	0.470	3e-59
Q9M290	228	Putative NAC domain-conta	no	no	0.792	0.868	0.443	9e-51
Q93VY3	297	NAC domain-containing pro	no	no	0.612	0.515	0.384	3e-28
Q9LDY8	317	NAC domain-containing pro	no	no	0.532	0.419	0.420	1e-25
A0SPJ6	396	NAC transcription factor	N/A	no	0.8	0.505	0.307	2e-25
Q8GY42	323	NAC transcription factor	no	no	0.58	0.448	0.404	2e-25
Q9C932	317	NAC domain-containing pro	no	no	0.532	0.419	0.407	4e-25
Q52QH4	318	NAC domain-containing pro	no	no	0.748	0.588	0.331	5e-25
A0SPJ9	402	NAC transcription factor	N/A	no	0.584	0.363	0.372	7e-25
A2YMR0	425	NAC transcription factor	N/A	no	0.572	0.336	0.369	2e-24

>sp|Q9FMR3|NAC90_ARATH NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1

 Score =  228 bits (581), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 129/274 (47%), Positives = 151/274 (55%), Gaps = 66/274 (24%)

Query: 2   EELPPGYRFFPTEEELVSFYLINKLE-------------------------ELCGEKCQG 36
           +E+  G+RF+PTEEELVSFYL N+LE                          + G +C+G
Sbjct: 3   DEVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRG 62

Query: 37  DTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKA 96
           D EQWFFF PRQERE RGGRPSRTT SGYWKATGSP  V+S DN++IG KKTMVFY GKA
Sbjct: 63  DAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGKA 122

Query: 97  PTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARRE 156
           PTGRKTKWKM+EY A++   N S+  IPKLR EFSLCR+Y+ + S RAFDRRP       
Sbjct: 123 PTGRKTKWKMNEYHAVDETVNAST--IPKLRREFSLCRVYITTGSSRAFDRRP------- 173

Query: 157 EQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYSG 216
                                      Q   M   DVA       +     SS ETS SG
Sbjct: 174 -----------------------EGVLQTERMLTSDVAVAETSFRV----ESSLETSISG 206

Query: 217 EDHSDYPETNLDNNWNIVADPQPPLWDWEQLNWP 250
            +H D     +  N   V     P+WDWEQL WP
Sbjct: 207 GEHID-----VSMNTEFVDGLSEPMWDWEQLTWP 235

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M290|NAC61_ARATH Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1

 Score =  200 bits (508), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/275 (44%), Positives = 146/275 (53%), Gaps = 77/275 (28%)

Query: 2   EELPPGYRFFPTEEELVSFYLI------------------------NKLEELCGEKCQGD 37
           EEL  G+RF+PTE EL+++YL                          +L  L GE+C+GD
Sbjct: 3   EELSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGD 62

Query: 38  TEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAP 97
            EQW FF PRQERE RGGRPSRTT SGYWKATGSP  V+S DNRVIGVKKTMVFY GKAP
Sbjct: 63  AEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAP 122

Query: 98  TGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARREE 157
           TGRKTKWKM+EY+A+E A   S + IP             KS S RAFDRRP EA   E 
Sbjct: 123 TGRKTKWKMNEYKAVETA---SVSTIP-------------KSGSSRAFDRRPTEAYAIER 166

Query: 158 QPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYSGE 217
                G  TS+   I                                  ++SPETS+SG 
Sbjct: 167 NLPSNGVETSSRATI----------------------------------STSPETSHSGG 192

Query: 218 DHSDYP---ETNLDNNWNIVADPQPPLWDWEQLNW 249
           +  D P    T   +  ++V +   P W+WEQ+NW
Sbjct: 193 NQVDLPVNATTITQSISDMVDELSQPFWEWEQMNW 227

Arabidopsis thaliana (taxid: 3702)

>sp|Q93VY3|NAC72_ARATH NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1

 Score =  125 bits (314), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 100/177 (56%), Gaps = 24/177 (13%)

Query: 4   LPPGYRFFPTEEELVSFYLINKLE------ELCGE-------------KCQGDTEQWFFF 44
           LPPG+RF+PT+EEL+  YL  K+       ++ G+             K     ++W+FF
Sbjct: 14  LPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFF 73

Query: 45  TPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKW 104
           +PR  +   G RP+R   SGYWKATG+   + ++D R +G+KK +VFY GKAP G KT W
Sbjct: 74  SPRDRKYPNGSRPNRVAGSGYWKATGTDKII-TADGRRVGIKKALVFYAGKAPKGTKTNW 132

Query: 105 KMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARREEQPHG 161
            MHEYR IE + +  S+ +     ++ LCRIY K+   +     P++A R E   +G
Sbjct: 133 IMHEYRLIEHSRSHGSSKL----DDWVLCRIYKKTSGSQRQAVTPVQACREEHSTNG 185

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDY8|NAC55_ARATH NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1

 Score =  117 bits (292), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 87/157 (55%), Gaps = 24/157 (15%)

Query: 4   LPPGYRFFPTEEELVSFYLINKLE------ELCGE-------------KCQGDTEQWFFF 44
           LPPG+RF+PT+EEL+  YL  K        +L  E             K     ++W+FF
Sbjct: 14  LPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFF 73

Query: 45  TPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKW 104
           +PR  +   G RP+R   SGYWKATG+   V S++ R +G+KK +VFY GKAP G KT W
Sbjct: 74  SPRDRKYPNGSRPNRVAGSGYWKATGTDK-VISTEGRRVGIKKALVFYIGKAPKGTKTNW 132

Query: 105 KMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSES 141
            MHEYR IE +    S  +     ++ LCRIY K  S
Sbjct: 133 IMHEYRLIEPSRRNGSTKL----DDWVLCRIYKKQTS 165

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  115 bits (289), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 44/244 (18%)

Query: 3   ELPPGYRFFPTEEELVSFYLINKLEEL-------------------CGEKCQGDTEQWFF 43
           ELPPG+RF PT+EELV  YL  K  ++                     EK     ++W+F
Sbjct: 27  ELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKATFGEQEWYF 86

Query: 44  FTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSD--NRVIGVKKTMVFYKGKAPTGRK 101
           F+PR  +   G RP+R   SGYWKATG+   + +S      +GVKK +VFY+GK P G K
Sbjct: 87  FSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPPKGLK 146

Query: 102 TKWKMHEYRAIEGASNPSSAVIPKLR----------HEFSLCRIYVKSESFRAFD-RRPL 150
           T W MHEYR  + +S+ +++  P +            ++ LCRIY K     A D +R +
Sbjct: 147 TNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYKKINKAAAGDQQRSM 206

Query: 151 EAARREEQP------------HGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSA 198
           E     E               G GA  S  ++++   +    +F D ++   D   ++ 
Sbjct: 207 ECEDSVEDAVTAYPLYATAGMTGAGAHGSNYDSLLHHQDSHEDNFLDGLLTAEDAGLSAG 266

Query: 199 QNNI 202
             ++
Sbjct: 267 PTSL 270

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score =  115 bits (289), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 94/178 (52%), Gaps = 33/178 (18%)

Query: 3   ELPPGYRFFPTEEELVSFYLINKLE--------------------ELCGEKCQGDTEQWF 42
            LPPG+RF PT+EELV  YL  K +                    EL  +   G+ E W+
Sbjct: 15  HLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHE-WY 73

Query: 43  FFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKT 102
           FF+PR  +   G RP+R   SGYWKATG+   +++ ++  +GVKK +VFY GK P G KT
Sbjct: 74  FFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKGIKT 133

Query: 103 KWKMHEYRAIEGASNPSSAVIP---------KLR-HEFSLCRIYVKSESFRAFDRRPL 150
            W MHEYR  +G  N S+A  P          LR  ++ LCRIY K+ S R    R L
Sbjct: 134 DWIMHEYRLTDG--NLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKNSSQRPTMERVL 189

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C932|NAC19_ARATH NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1

 Score =  115 bits (287), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 87/157 (55%), Gaps = 24/157 (15%)

Query: 4   LPPGYRFFPTEEELVSFYLINKLE------ELCGE-------------KCQGDTEQWFFF 44
           LPPG+RF+PT+EEL+  YL  K        +L  E             K     ++W+FF
Sbjct: 14  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFF 73

Query: 45  TPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKW 104
           +PR  +   G RP+R   SGYWKATG+   + S++ + +G+KK +VFY GKAP G KT W
Sbjct: 74  SPRDRKYPNGSRPNRVAGSGYWKATGTDKII-STEGQRVGIKKALVFYIGKAPKGTKTNW 132

Query: 105 KMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSES 141
            MHEYR IE +    S  +     ++ LCRIY K  S
Sbjct: 133 IMHEYRLIEPSRRNGSTKL----DDWVLCRIYKKQSS 165

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  114 bits (286), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 100/220 (45%), Gaps = 33/220 (15%)

Query: 4   LPPGYRFFPTEEELVSFYLINKLEEL-------------------CGEKCQGDTEQWFFF 44
           LPPG+RF PT+EELV  YL  K+                        EK     ++W+FF
Sbjct: 21  LPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFF 80

Query: 45  TPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDN-RVIGVKKTMVFYKGKAPTGRKTK 103
           TPR  +   G RP+R    GYWKATG+   V    + R +G+KK +VFY GKAP G KT 
Sbjct: 81  TPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTD 140

Query: 104 WKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARREEQPHGGG 163
           W MHEYR  +    P      +   E+ LCR+Y K  ++        E  + E+Q     
Sbjct: 141 WIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNW--------EKVKLEQQDVASV 192

Query: 164 ATTSAPNNIMVRGNGSNTSFQDAI-----MCDGDVATTSA 198
           A  +  N+    G   + +  D +       D D+   SA
Sbjct: 193 AAAAPRNHHHQNGEVMDAAAADTMSDSFQTHDSDIDNASA 232

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  114 bits (284), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 92/177 (51%), Gaps = 31/177 (17%)

Query: 3   ELPPGYRFFPTEEELVSFYLINKLEEL-------------------CGEKCQGDTEQWFF 43
           ELPPG+RF PT+EELV  YL  K  ++                     EK     ++W+F
Sbjct: 27  ELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWYF 86

Query: 44  FTPRQEREERGGRPSRTTASGYWKATGSPSYVYSS--DNRVIGVKKTMVFYKGKAPTGRK 101
           F+PR  +   G RP+R   SGYWKATG+   + +S      +GVK  +VFY+GK P G K
Sbjct: 87  FSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKXALVFYRGKPPKGLK 146

Query: 102 TKWKMHEYRAIEGASNPSSAVIP---------KLR-HEFSLCRIYVKSESFRAFDRR 148
           T W MHEYR  + +S+ +++  P          LR  ++ LCRIY K     A D++
Sbjct: 147 TNWIMHEYRLTDASSSAATSRPPPVTGGSRAASLRLDDWVLCRIYKKINKAAAADQQ 203

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  113 bits (282), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 88/184 (47%), Gaps = 41/184 (22%)

Query: 3   ELPPGYRFFPTEEELVSFYLINKLEEL-------------------CGEKCQGDTEQWFF 43
           ELPPG+RF PT+EELV  YL  K   +                     EK     ++W+F
Sbjct: 28  ELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANFGEQEWYF 87

Query: 44  FTPRQEREERGGRPSRTTASGYWKATGS--PSYVYSSDNRVIGVKKTMVFYKGKAPTGRK 101
           F+PR  +   G RP+R   SGYWKATG+  P     S    +GVKK +VFY+GK P G K
Sbjct: 88  FSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPKGVK 147

Query: 102 TKWKMHEYRAIEGASNPSSAVIPKLRH------------------EFSLCRIYVKSESFR 143
           T W MHEYR  + +S  S+A +   R                   ++ LCRIY K+    
Sbjct: 148 TNWIMHEYRLTDTSS--SAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCRIYKKTNKAG 205

Query: 144 AFDR 147
           A  R
Sbjct: 206 AGQR 209

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
224054472	246	NAC domain protein, IPR003441 [Populus t	0.88	0.894	0.594	1e-75
255565689	240	conserved hypothetical protein [Ricinus	0.86	0.895	0.578	2e-70
443682306	246	NAC protein 13 [Gossypium hirsutum]	0.868	0.882	0.533	5e-68
356550097	253	PREDICTED: NAC domain-containing protein	0.916	0.905	0.525	1e-66
356542033	244	PREDICTED: NAC domain-containing protein	0.868	0.889	0.530	4e-66
224104589	227	NAC domain protein, IPR003441 [Populus t	0.744	0.819	0.550	9e-65
225460442	247	PREDICTED: NAC domain-containing protein	0.884	0.894	0.525	2e-62
147782342	237	hypothetical protein VITISV_038299 [Viti	0.628	0.662	0.744	2e-62
357453129	249	NAC domain protein [Medicago truncatula]	0.888	0.891	0.501	2e-62
296089502	225	unnamed protein product [Vitis vinifera]	0.796	0.884	0.529	1e-61

>gi|224054472|ref|XP_002298277.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|224149083|ref|XP_002336754.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222836661|gb|EEE75054.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222845535|gb|EEE83082.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 164/276 (59%), Positives = 175/276 (63%), Gaps = 56/276 (20%)

Query: 1   MEELPPGYRFFPTEEELVSFYLINKL-------------------------EELCGEKCQ 35
           MEELP GYRF+PTEEEL+SFYL NKL                          +L GE CQ
Sbjct: 1   MEELPLGYRFYPTEEELISFYLHNKLGGGRQERLQRVIPDISIYDIEPWDLPKLSGELCQ 60

Query: 36  GDTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGK 95
           GDTEQWFFFTPRQERE RGGRP+RTTASGYWKATGSP YVYSSDNRVIG+KKTMVFY GK
Sbjct: 61  GDTEQWFFFTPRQEREARGGRPNRTTASGYWKATGSPGYVYSSDNRVIGLKKTMVFYTGK 120

Query: 96  APTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARR 155
           AP GRKTKWKM+EYRAIE     SS   PKLRHEFSLCR+YV S SFRAFDRRPLEA  R
Sbjct: 121 APRGRKTKWKMNEYRAIE-VHESSSNATPKLRHEFSLCRVYVVSGSFRAFDRRPLEAVTR 179

Query: 156 EEQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYS 215
           E Q  G GATTSA                     D  V  T           SSPETSYS
Sbjct: 180 ETQLLGDGATTSAQGP------------------DPTVDMT-----------SSPETSYS 210

Query: 216 GEDHSDYPETNLDNNWNIVADPQPPLWDWE-QLNWP 250
            EDH D+P T    NW  V   +PP W+W  QL+WP
Sbjct: 211 VEDHVDHPGTAASANWGSVDGLEPPAWEWPGQLDWP 246

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565689|ref|XP_002523834.1| conserved hypothetical protein [Ricinus communis] gi|223536922|gb|EEF38560.1| conserved hypothetical protein [Ricinus communis]

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/275 (57%), Positives = 175/275 (63%), Gaps = 60/275 (21%)

Query: 1   MEELPPGYRFFPTEEELVSFYLINKLE-------------------------ELCGEKCQ 35
           MEELPPG+RF+PTEEELVSFYL+NKLE                         +L GE CQ
Sbjct: 1   MEELPPGFRFYPTEEELVSFYLLNKLEGKRQERLNQVIPAIDICSTEPWELPKLAGELCQ 60

Query: 36  GDTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGK 95
           GDTEQWFFFTPRQERE RGGRPSRTTASGYWKATGSP YVYSSDNRVIGVKKTMVFYKGK
Sbjct: 61  GDTEQWFFFTPRQEREARGGRPSRTTASGYWKATGSPGYVYSSDNRVIGVKKTMVFYKGK 120

Query: 96  APTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARR 155
           APTGRKTKWKM+EYRAIEGA + S+  +PKLR       +YV S SFRAFDRRPLE+  R
Sbjct: 121 APTGRKTKWKMNEYRAIEGAPDSSTTHVPKLRXX-----VYVISGSFRAFDRRPLESTAR 175

Query: 156 EEQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYS 215
           E Q  G                             GD+AT SAQ+  +    SS ETS S
Sbjct: 176 ETQFLG-----------------------------GDIATASAQHPRIVDNTSSSETSNS 206

Query: 216 GEDHSDYPETNLDNNWNIVADPQPPLWDWEQLNWP 250
           G DH+D P      NW  V D    LW+WEQL+WP
Sbjct: 207 GGDHADVPRMAESANWE-VDDLANSLWEWEQLSWP 240

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|443682306|gb|AGC97443.1| NAC protein 13 [Gossypium hirsutum]

 Score =  263 bits (672), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 145/272 (53%), Positives = 171/272 (62%), Gaps = 55/272 (20%)

Query: 3   ELPPGYRFFPTEEELVSFYLINKLE------------------------ELCGEKCQGDT 38
           E+P G+RFFPTEEELVSFYL N+L+                        +L GE+C+ DT
Sbjct: 2   EIPAGFRFFPTEEELVSFYLRNQLDGRRQEMHSVIPVLNIYDVEPWDLPQLAGERCRRDT 61

Query: 39  EQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPT 98
           EQWF+FTPRQERE RGGR +RTTASGYWKATGSPSYVYSSD+RVIG+KKTMVFYKGKAP+
Sbjct: 62  EQWFYFTPRQEREARGGRANRTTASGYWKATGSPSYVYSSDDRVIGMKKTMVFYKGKAPS 121

Query: 99  GRKTKWKMHEYRAIEGASNPSSAV-IPKLRHEFSLCRIYVKSESFRAFDRRPLEAARREE 157
           G+KTKWKM+EYRAIE   NP++    P LRHEFSLCRIYV S SFRAFDRRPLE   R  
Sbjct: 122 GKKTKWKMNEYRAIEAVPNPTAVTRTPMLRHEFSLCRIYVVSGSFRAFDRRPLETVSRAT 181

Query: 158 QPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYSGE 217
           Q H                             +   AT S + ++M   +SS  +   G 
Sbjct: 182 QLH-----------------------------ENRTATFSERASMMEVTSSSSTSHSGG- 211

Query: 218 DHSDYPETNLDNNWNIVADPQPPLWDWEQLNW 249
           DHSD PE N D+ W +V D + P   WEQ+NW
Sbjct: 212 DHSDQPEANEDDIWEMVNDLKEPPLGWEQMNW 243

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550097|ref|XP_003543426.1| PREDICTED: NAC domain-containing protein 90-like [Glycine max]

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/274 (52%), Positives = 178/274 (64%), Gaps = 45/274 (16%)

Query: 1   MEELPPGYRFFPTEEELVSFYLINKLE------------------------ELCGEKCQG 36
           ME LPPG+RF+PTEEELV FYL N+LE                         L GE C+G
Sbjct: 1   MEFLPPGFRFYPTEEELVVFYLHNQLEGQIHDTSRVIPVTDINGVEPWNLPTLAGEFCRG 60

Query: 37  DTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKA 96
           DTEQWFFF+PRQERE RGGRP+RTTASGYWKATGSP +VYSSDN+VIG+KKTMVFYKGKA
Sbjct: 61  DTEQWFFFSPRQEREARGGRPNRTTASGYWKATGSPGHVYSSDNKVIGMKKTMVFYKGKA 120

Query: 97  PTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARRE 156
           PTGRKTKWKMH+Y+AIE  S+ S+   PKLRHEFSLCR+YV S SFR+FDRRPLE  R E
Sbjct: 121 PTGRKTKWKMHQYKAIE-HSHQSNTAPPKLRHEFSLCRVYVISGSFRSFDRRPLEMPRIE 179

Query: 157 EQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYSG 216
            +  G             RG  S ++ Q A + DG  ++ ++ ++  G   S    + +G
Sbjct: 180 LRVDGD------------RGAASTSTQQRAAVVDGLSSSDTSSHSGGGRGGSHISEAGAG 227

Query: 217 EDHSDYPETNLDNNWNIVADPQPPLWDWEQLNWP 250
              +++  +N        +  + PLW+WEQLNWP
Sbjct: 228 SSGTNWNASN--------SRVEEPLWEWEQLNWP 253

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542033|ref|XP_003539476.1| PREDICTED: NAC domain-containing protein 90-like [Glycine max]

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 147/277 (53%), Positives = 175/277 (63%), Gaps = 60/277 (21%)

Query: 1   MEELPPGYRFFPTEEELVSFYLINKLE------------------------ELCGEKCQG 36
           M++LPPG+RF+PTEEELV FYL N+LE                         L GE C+G
Sbjct: 1   MDDLPPGFRFYPTEEELVFFYLHNQLEGQIHDTSRVIPVIDINGVEPWNLPSLAGELCRG 60

Query: 37  DTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKA 96
           DTEQWFFF+PRQERE RGGRP+RTTASGYWKATGSP +VYSSDN+VIG+KKTMVFYKGKA
Sbjct: 61  DTEQWFFFSPRQEREARGGRPNRTTASGYWKATGSPGHVYSSDNKVIGMKKTMVFYKGKA 120

Query: 97  PTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARRE 156
           PTGRKTKWKMHEY+AIE  S+ S+   PKLRHEFSLCR+YV S SFR+FDRRPL+  R E
Sbjct: 121 PTGRKTKWKMHEYKAIE-HSDQSNTAPPKLRHEFSLCRVYVISGSFRSFDRRPLDMPRVE 179

Query: 157 EQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGD--VATTSAQNNIMGPRASSPETSY 214
            +                             + DGD   A+TSAQ      R+SS  +  
Sbjct: 180 LR-----------------------------VVDGDRGAASTSAQAQ---QRSSSHTSHS 207

Query: 215 SGEDH-SDYPETNLDNNWNIVADPQPPLWDWEQLNWP 250
            G+ H +D    +   NWN     + PLW+WEQL+WP
Sbjct: 208 GGDAHVTDAGAGSSGTNWNASNRVEEPLWEWEQLDWP 244

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104589|ref|XP_002313490.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222849898|gb|EEE87445.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  252 bits (644), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 142/258 (55%), Positives = 154/258 (59%), Gaps = 72/258 (27%)

Query: 1   MEELPPGYRFFPTEEELVSFYLINKLE------------------------ELCGEKCQG 36
           MEELP GYRF+PTEEELVSFYL NKLE                        +L GE C+G
Sbjct: 1   MEELPLGYRFYPTEEELVSFYLHNKLEGTRQELQRVIPEISIYDIEPGDLPQLSGELCRG 60

Query: 37  DTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKA 96
           +TEQWFFFTPRQ RE RGGRP+RTTA+GYWKATGSP YVYSSDNRVIG+KKTMVFY GKA
Sbjct: 61  NTEQWFFFTPRQAREARGGRPNRTTATGYWKATGSPGYVYSSDNRVIGLKKTMVFYIGKA 120

Query: 97  PTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARRE 156
           PTGRKTKWKM+EYRAIE     S     KLRHEFSLCR+YV S SFRAFDRRPLEA    
Sbjct: 121 PTGRKTKWKMNEYRAIE-VHESSRNATSKLRHEFSLCRVYVVSGSFRAFDRRPLEA---- 175

Query: 157 EQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYSG 216
                                       D I  +                 SSPETSYSG
Sbjct: 176 ----------------------------DPITVE---------------MTSSPETSYSG 192

Query: 217 EDHSDYPETNLDNNWNIV 234
            DH DYP T    NW ++
Sbjct: 193 GDHVDYPGTAASANWGLI 210

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460442|ref|XP_002266232.1| PREDICTED: NAC domain-containing protein 90-like [Vitis vinifera]

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/274 (52%), Positives = 162/274 (59%), Gaps = 53/274 (19%)

Query: 1   MEELPPGYRFFPTEEELVSFYLINKLE-------------------------ELCGEKCQ 35
           ME+LPPG+RF+PTEEELVSFYL  KL+                          L GE C+
Sbjct: 1   MEDLPPGFRFYPTEEELVSFYLRMKLQGKRLQELNRVIPDVNIYELEPWHLPRLSGEVCR 60

Query: 36  GDTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGK 95
            DTEQWFFF PRQ RE +GGRPSRTT SGYWKATGSPSYVYSSDNRVIGVKKTMVFY GK
Sbjct: 61  RDTEQWFFFIPRQAREVQGGRPSRTTGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYNGK 120

Query: 96  APTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARR 155
           AP GRKTKWKM EYRAIE  +       PKLRHEFSL R+YV S SFRAFDRRPL    R
Sbjct: 121 APAGRKTKWKMQEYRAIEADAT------PKLRHEFSLSRVYVISGSFRAFDRRPLGTVTR 174

Query: 156 EEQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYS 215
           EE             +  VR   +  +   A     D    +    +M  R+SSPE SYS
Sbjct: 175 EE------------TSQQVRRQHAAAAAAAAAAVSSDHVQDT---QMMEKRSSSPECSYS 219

Query: 216 GEDHSDYPETNLDNNWNIVADPQPPLWDWEQLNW 249
           G     Y   +L  +   + D    LWDW QL+W
Sbjct: 220 G----GYDHVHLQASSAPIDD---FLWDWGQLDW 246

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147782342|emb|CAN67384.1| hypothetical protein VITISV_038299 [Vitis vinifera]

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 125/168 (74%), Positives = 134/168 (79%), Gaps = 11/168 (6%)

Query: 1   MEELPPGYRFFPTEEELVSFYLINKLE---------ELCGEKCQGDTEQWFFFTPRQERE 51
           ME+LPPG+RF+PTEEELVSFYL  KL           + GE C+ DTEQWFFFTPRQERE
Sbjct: 1   MEDLPPGFRFYPTEEELVSFYLRMKLRGKRLQEISRNMQGEVCKADTEQWFFFTPRQERE 60

Query: 52  ERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRA 111
            RGGRPSRTT SGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAP GRKTKWKMHEYRA
Sbjct: 61  ARGGRPSRTTESGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPAGRKTKWKMHEYRA 120

Query: 112 IE--GASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARREE 157
           IE    +  S+  IPKLRHEF+L R+YV S SFRAFDRRPL    REE
Sbjct: 121 IETDTTTLNSTTAIPKLRHEFTLSRVYVVSGSFRAFDRRPLGTVVREE 168

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357453129|ref|XP_003596841.1| NAC domain protein [Medicago truncatula] gi|355485889|gb|AES67092.1| NAC domain protein [Medicago truncatula]

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/275 (50%), Positives = 174/275 (63%), Gaps = 53/275 (19%)

Query: 1   MEELPPGYRFFPTEEELVSFYLINKLE-------------------------ELCGEKCQ 35
           M + PPG+RF+PTEEELV FYL N+LE                            GE+C+
Sbjct: 1   MGDSPPGFRFYPTEEELVGFYLHNQLEGQKHEDINKIIPLIDINGKEPWNLPTFAGERCR 60

Query: 36  GDTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGK 95
           GDTEQWFFF+PRQ+RE RGGRP+RTT+ GYWKATGSPSYVYSS+N+VIG++KTMVFY GK
Sbjct: 61  GDTEQWFFFSPRQDRELRGGRPNRTTSCGYWKATGSPSYVYSSNNKVIGIRKTMVFYIGK 120

Query: 96  APTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARR 155
           AP+GRKTKWKMHEY+AI+  S+ S+   PKLRHEFSLCR+YV S SF +FDRRPLE    
Sbjct: 121 APSGRKTKWKMHEYKAIQ-QSDQSNTNPPKLRHEFSLCRVYVISGSFSSFDRRPLERPMT 179

Query: 156 EEQPHGGGATTSAPNNIMVRGNGSNT-SFQDAIMCDGDVATTSAQNNIMGPRASSPETSY 214
           E Q     A +++   ++   NGSN+ +    I  D D +      NI G          
Sbjct: 180 ELQ----HAASTSTQQVVAELNGSNSYATSRGIERDHDASL-----NIGGS--------- 221

Query: 215 SGEDHSDYPETNLDNNWNIVADPQPPLWDWEQLNW 249
           SG + +D P   +D       +P+ P+W+WEQLNW
Sbjct: 222 SGTNWNDVPNNGVD-------EPE-PIWEWEQLNW 248

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089502|emb|CBI39321.3| unnamed protein product [Vitis vinifera]

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/274 (52%), Positives = 158/274 (57%), Gaps = 75/274 (27%)

Query: 1   MEELPPGYRFFPTEEELVSFYLINKLE-------------------------ELCGEKCQ 35
           ME+LPPG+RF+PTEEELVSFYL  KL+                          L GE C+
Sbjct: 1   MEDLPPGFRFYPTEEELVSFYLRMKLQGKRLQELNRVIPDVNIYELEPWHLPRLSGEVCR 60

Query: 36  GDTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGK 95
            DTEQWFFF PRQ RE +GGRPSRTT SGYWKATGSPSYVYSSDNRVIGVKKTMVFY GK
Sbjct: 61  RDTEQWFFFIPRQAREVQGGRPSRTTGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYNGK 120

Query: 96  APTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARR 155
           AP GRKTKWKM EYRAIE  +       PKLRHEFSL R+YV S SFRAFDRRPL    R
Sbjct: 121 APAGRKTKWKMQEYRAIEADAT------PKLRHEFSLSRVYVISGSFRAFDRRPLGTVTR 174

Query: 156 EEQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVATTSAQNNIMGPRASSPETSYS 215
           EE                       TS QD  M              M  R+SSPE SYS
Sbjct: 175 EE-----------------------TSQQDTQM--------------MEKRSSSPECSYS 197

Query: 216 GEDHSDYPETNLDNNWNIVADPQPPLWDWEQLNW 249
           G     Y   +L  +   + D    LWDW QL+W
Sbjct: 198 G----GYDHVHLQASSAPIDD---FLWDWGQLDW 224

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
TAIR|locus:2176372	235	NAC090 "NAC domain containing	0.488	0.519	0.645	7.3e-58
TAIR|locus:2100212	241	NAC061 "NAC domain containing	0.68	0.705	0.576	2e-51
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.472	0.324	0.440	2.2e-29
TAIR|locus:2827676	276	NAC036 "NAC domain containing	0.852	0.771	0.326	7.6e-29
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.816	0.631	0.327	1.2e-28
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.5	0.394	0.415	3.2e-28
TAIR|locus:2061082	316	NAC038 "NAC domain containing	0.572	0.452	0.328	3.2e-28
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.504	0.397	0.407	6.6e-28
TAIR|locus:2056266	414	LOV1 "LONG VEGETATIVE PHASE 1"	0.716	0.432	0.321	5.6e-27
TAIR|locus:2095007	314	NAC058 "NAC domain containing	0.48	0.382	0.376	5.8e-27

TAIR|locus:2176372 NAC090 "NAC domain containing protein 90" [Arabidopsis thaliana (taxid:3702)]

 Score = 435 (158.2 bits), Expect = 7.3e-58, Sum P(3) = 7.3e-58
 Identities = 80/124 (64%), Positives = 93/124 (75%)

Query:    26 LEELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGV 85
             L  + G +C+GD EQWFFF PRQ        PSRTT SGYWKATGSP  V+S DN++IG 
Sbjct:    52 LPNVAGVRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGA 111

Query:    86 KKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAF 145
             KKTMVFY GKAPTGRKTKWKM+EY A++   N S+  IPKLR EFSLCR+Y+ + S RAF
Sbjct:   112 KKTMVFYTGKAPTGRKTKWKMNEYHAVDETVNAST--IPKLRREFSLCRVYITTGSSRAF 169

Query:   146 DRRP 149
             DRRP
Sbjct:   170 DRRP 173

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2100212 NAC061 "NAC domain containing protein 61" [Arabidopsis thaliana (taxid:3702)]

 Score = 477 (173.0 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
 Identities = 102/177 (57%), Positives = 114/177 (64%)

Query:    25 KLEELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIG 84
             +L  L GE+C+GD EQW FF PRQ        PSRTT SGYWKATGSP  V+S DNRVIG
Sbjct:    50 QLPNLAGERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIG 109

Query:    85 VKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRA 144
             VKKTMVFY GKAPTGRKTKWKM+EY+A+E AS    + IPKLR EFS+CRIY+KS S RA
Sbjct:   110 VKKTMVFYTGKAPTGRKTKWKMNEYKAVETAS---VSTIPKLRPEFSICRIYIKSGSSRA 166

Query:   145 FDRRPLEAARREEQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDV-ATTSAQN 200
             FDRRP EA   E      G  TS+   I        TS       D  V ATT  Q+
Sbjct:   167 FDRRPTEAYAIERNLPSNGVETSSRATI---STSPETSHSGGNQVDLPVNATTITQS 220

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010200 "response to chitin" evidence=IEP

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 236 (88.1 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
 Identities = 56/127 (44%), Positives = 71/127 (55%)

Query:    28 ELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSD-NRVIGVK 86
             EL  +   G+ E W+FF+PR         P+R   SGYWKATG+   V +SD N+ +GVK
Sbjct:    61 ELPAKASFGEQE-WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVK 119

Query:    87 KTMVFYKGKAPTGRKTKWKMHEYRAIEGASN---PSSAVIPK---LR-HEFSLCRIYVKS 139
             K +VFY GK P G K+ W MHEYR IE   N   P      K   LR  ++ LCRIY K+
Sbjct:   120 KALVFYSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKN 179

Query:   140 ESFRAFD 146
              + R  D
Sbjct:   180 NASRHVD 186

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2827676 NAC036 "NAC domain containing protein 36" [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
 Identities = 79/242 (32%), Positives = 124/242 (51%)

Query:    16 ELVSFYLINKLE--ELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPS 73
             E++ F  I + +  +L G    G+ E W+FF PR+        PSRTT  GYWKATGS  
Sbjct:    36 EVIGFLNIYRHDPWDLPGLSRIGERE-WYFFVPRERKHGNGGRPSRTTEKGYWKATGSDR 94

Query:    74 YVYS-SD-NRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFS 131
              + S S+  RVIG+KKT+VFY+G+AP G KT W M+E+R       P +  +PK   +  
Sbjct:    95 KIISLSEPKRVIGLKKTLVFYRGRAPGGSKTDWVMNEFRM------PDNCSLPK---DVV 145

Query:   132 LCRIYVKSESFRAFDRRP-LEAARREEQPHGGGATTSAPNNIMVRGNGSN--TSFQDAIM 188
             LC+IY K+ S +  ++R  +EA   +  P+   +  S+   I   G   N  TSF+   +
Sbjct:   146 LCKIYRKATSLKVLEQRAEMEAKMNQTCPN---SPLSSSETISFVGKEENMMTSFRAPQV 202

Query:   189 CDGDVATTSAQNNIMGPRASSPETSYSGEDHSDYPETNLDNNWNIVAD---PQPPLWDWE 245
                 +A   A N I   + ++       E  +  P ++L   +  + +   P+P + +W+
Sbjct:   203 ----IAMEEA-NKIQMHQENAKTEEKQREAETKEPSSSLKLPFGSLPELQLPKPGV-EWD 256

Query:   246 QL 247
             QL
Sbjct:   257 QL 258

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010200 "response to chitin" evidence=IEP

GO:0009965 "leaf morphogenesis" evidence=IMP

GO:0045792 "negative regulation of cell size" evidence=IMP

GO:0048281 "inflorescence morphogenesis" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
 Identities = 72/220 (32%), Positives = 106/220 (48%)

Query:    28 ELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKK 87
             EL  +   G+ E W+FF+PR         P+R   SGYWKATG+   +++ ++  +GVKK
Sbjct:    60 ELPSKASFGEHE-WYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKK 118

Query:    88 TMVFYKGKAPTGRKTKWKMHEYRAIEG----ASNPSSAVIPK---LR-HEFSLCRIYVKS 139
              +VFY GK P G KT W MHEYR  +G    A+ P      +   LR  ++ LCRIY K+
Sbjct:   119 ALVFYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKN 178

Query:   140 ESFR-AFDRRPLEAARRE---EQPHGGGATTSAPNNIMVRGNGSNTSFQDAIMCDGDVAT 195
              S R   +R  L     E    +     ++TS  +N     N +   F D ++   D  +
Sbjct:   179 SSQRPTMERVLLREDLMEGMLSKSSANSSSTSVLDNNDNNNNNNEEHFFDGMVVSSDKRS 238

Query:   196 TSAQNNIMGPRASSPETSYSGEDHSDYPET-NLDN-NWNI 233
                Q   MG  AS   +  S      +  T +L+N N+N+
Sbjct:   239 LCGQYR-MGHEASGSSSFGSFLSSKRFHHTGDLNNDNYNV 277

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
 Identities = 54/130 (41%), Positives = 74/130 (56%)

Query:    39 EQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPT 98
             ++W+FF+PR         P+R   SGYWKATG+   V S++ R +G+KK +VFY GKAP 
Sbjct:    68 KEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK-VISTEGRRVGIKKALVFYIGKAPK 126

Query:    99 GRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAARREEQ 158
             G KT W MHEYR IE +    S    KL  ++ LCRIY K  S +      L  + RE  
Sbjct:   127 GTKTNWIMHEYRLIEPSRRNGST---KL-DDWVLCRIYKKQTSAQKQAYNNLMTSGREYS 182

Query:   159 PHGGGATTSA 168
              +G   ++S+
Sbjct:   183 NNGSSTSSSS 192

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2061082 NAC038 "NAC domain containing protein 38" [Arabidopsis thaliana (taxid:3702)]

 Score = 223 (83.6 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
 Identities = 50/152 (32%), Positives = 81/152 (53%)

Query:    23 INKLE--ELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSD- 79
             +NK E  EL  EK +   ++W+FF+ R          +R T +GYWK TG    +++S  
Sbjct:    53 LNKSEPWEL-PEKAKMGGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTT 111

Query:    80 NRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKS 139
             + ++G+KKT+VFY+G+AP G KT W MHEYR    +S  +S      + E+ +CR++ K+
Sbjct:   112 SELVGMKKTLVFYRGRAPRGEKTCWVMHEYRLHSKSSYRTSK-----QDEWVVCRVFKKT 166

Query:   140 ESFRAFDRRPLEAARREEQPHGGGATTSAPNN 171
             E+ + +      +       H   +  S  NN
Sbjct:   167 EATKKYISTSSSSTSHHHNNHTRASILSTNNN 198

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
 Identities = 55/135 (40%), Positives = 78/135 (57%)

Query:    39 EQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPT 98
             ++W+FF+PR         P+R   SGYWKATG+   + S++ + +G+KK +VFY GKAP 
Sbjct:    68 KEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII-STEGQRVGIKKALVFYIGKAPK 126

Query:    99 GRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFR--AFDRRPLEAARRE 156
             G KT W MHEYR IE +    S    KL  ++ LCRIY K  S +   +D     A  RE
Sbjct:   127 GTKTNWIMHEYRLIEPSRRNGST---KL-DDWVLCRIYKKQSSAQKQVYDNGIANA--RE 180

Query:   157 EQPHGGGATTSAPNN 171
                +G  +TTS+ ++
Sbjct:   181 FSNNGTSSTTSSSSH 195

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2056266 LOV1 "LONG VEGETATIVE PHASE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 5.6e-27, Sum P(2) = 5.6e-27
 Identities = 65/202 (32%), Positives = 95/202 (47%)

Query:    16 ELVSFYLINKLE--ELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPS 73
             EL++F  + + +  EL      G+ E W+F+ PR         P+R T SGYWKATG+  
Sbjct:    81 ELITFLDLYRYDPWELPAMAAIGEKE-WYFYVPRDRKYRNGDRPNRVTTSGYWKATGADR 139

Query:    74 YVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLC 133
              + S  +R IG+KKT+VFY GKAP G +T W M+EYR       P        + E SLC
Sbjct:   140 MIRSETSRPIGLKKTLVFYSGKAPKGTRTSWIMNEYRL------PHHETEKYQKAEISLC 193

Query:   134 RIYVK-----------SESFRAFDRRPLEAARR--EEQPHGGGATTSAPNNIMVRGNGSN 180
             R+Y +           S S R  +     ++R    +Q H   ++  + NN+    N +N
Sbjct:   194 RVYKRPGVEDHPSVPRSLSTRHHNHNSSTSSRLALRQQQHHSSSSNHSDNNLNNNNNINN 253

Query:   181 TS-FQDAIMCDGDVATTSAQNN 201
                       DG   TT+  +N
Sbjct:   254 LEKLSTEYSGDGSTTTTTTNSN 275

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2095007 NAC058 "NAC domain containing protein 58" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
 Identities = 49/130 (37%), Positives = 77/130 (59%)

Query:    23 INKLE--ELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDN 80
             +NK E  +L  +   G+ E W+FF+ R          +R T +GYWK TG    +Y S  
Sbjct:    42 LNKCEPWDLPAKASMGEKE-WYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRS-G 99

Query:    81 RVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSE 140
              ++G+KKT+VFYKG+AP G K+ W MHEYR +E +  P +   P  + E+ +CR++ KS 
Sbjct:   100 VLVGMKKTLVFYKGRAPKGEKSNWVMHEYR-LE-SKQPFN---PTNKEEWVVCRVFEKST 154

Query:   141 SFR-AFDRRP 149
             + + A +++P
Sbjct:   155 AAKKAQEQQP 164

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: NAC106 NAC domain protein, IPR003441 (246 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	250
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	2e-55

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  173 bits (442), Expect = 2e-55
 Identities = 58/130 (44%), Positives = 73/130 (56%), Gaps = 21/130 (16%)

Query: 4   LPPGYRFFPTEEELVSFYLINKLE---------------------ELCGEKCQGDTEQWF 42
           LPPG+RF PT+EELV +YL  K+                      +L   K +G   +W+
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWY 60

Query: 43  FFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKT 102
           FF+PR  +   G R +R T SGYWKATG    V S    V+G+KKT+VFYKG+AP G KT
Sbjct: 61  FFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEKT 120

Query: 103 KWKMHEYRAI 112
            W MHEYR  
Sbjct: 121 DWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	250
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=7.9e-37  Score=247.85  Aligned_cols=107  Identities=52%  Similarity=1.050  Sum_probs=78.7

Q ss_pred             CCCCcEEcCCHHHHHHHHHHHhhh---------------------hhhccccCCCCceEEEEccccccccCCCCCccccc
Q 025570            4 LPPGYRFFPTEEELVSFYLINKLE---------------------ELCGEKCQGDTEQWFFFTPRQEREERGGRPSRTTA   62 (250)
Q Consensus         4 LPpGfRF~PTDeELV~~YL~~Ki~---------------------~lp~~~~~g~~e~WYFFs~r~~k~~~G~R~~R~t~   62 (250)
                      |||||||+|||+|||.+||++||.                     +|+. ...+.+++||||+++++++.++.|++|+++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~-~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~   79 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPA-KFKGGDEEWYFFSPRKKKYPNGGRPNRVTG   79 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHH-HSSS-SSEEEEEEE----------S-EEET
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhh-hccCCCceEEEEEecccccCCccccccccc
Confidence            899999999999999999999998                     2231 112345579999999999999999999999


Q ss_pred             CceeEecCCCeeEEcCCCeEEEEEEEEeeecCcCCCCCCcCeEEEEEEe
Q 025570           63 SGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRA  111 (250)
Q Consensus        63 ~G~Wk~tG~~k~V~~~~g~~IG~KktlvFy~g~~p~g~kT~WvMhEYrl  111 (250)
                      +|+||++|+.++|++.++.+||+|++|+||.++.+.+.+|+|+||||+|
T Consensus        80 ~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L  128 (129)
T PF02365_consen   80 GGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSL  128 (129)
T ss_dssp             TEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE
T ss_pred             ceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEe
Confidence            9999999999999987899999999999999888889999999999998

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	250
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		4e-24
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		4e-24
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		9e-22

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 84/157 (53%), Gaps = 24/157 (15%)
Query: 4   LPPGYRFFPTEEELVSFYLINKLE------ELCGE-------------KCQGDTEQWFFF 44
           LPPG+RF+PT+EEL+  YL  K        +L  E             K     ++W+FF
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFF 76
Query: 45  TPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKW 104
           +PR         P+R   SGYWKATG+   + S++ + +G+KK +VFY GKAP G KT W
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKII-STEGQRVGIKKALVFYIGKAPKGTKTNW 135
Query: 105 KMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSES 141
            MHEYR IE +    S  +     ++ LCRIY K  S
Sbjct: 136 IMHEYRLIEPSRRNGSTKL----DDWVLCRIYKKQSS 168

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 84/157 (53%), Gaps = 24/157 (15%)
Query: 4   LPPGYRFFPTEEELVSFYLINKLE------ELCGE-------------KCQGDTEQWFFF 44
           LPPG+RF+PT+EEL+  YL  K        +L  E             K     ++W+FF
Sbjct: 20  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFF 79
Query: 45  TPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKW 104
           +PR         P+R   SGYWKATG+   + S++ + +G+KK +VFY GKAP G KT W
Sbjct: 80  SPRDRKYPNGSRPNRVAGSGYWKATGTDKII-STEGQRVGIKKALVFYIGKAPKGTKTNW 138
Query: 105 KMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSES 141
            MHEYR IE +    S  +     ++ LCRIY K  S
Sbjct: 139 IMHEYRLIEPSRRNGSTKL----DDWVLCRIYKKQSS 171

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  100 bits (248), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 21/156 (13%)
Query: 4   LPPGYRFFPTEEELVSFYLINK----------LEEL---------CGEKCQGDTEQWFFF 44
           LPPG+RF PT++ELV  YL  K          + E+           E+      +W+FF
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFF 74
Query: 45  TPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKW 104
           TPR         P+R   +GYWKATG+   V +   R +G+KK +VFY GKAP G KT W
Sbjct: 75  TPRDRKYPNGSRPNRAAGNGYWKATGADKPV-APRGRTLGIKKALVFYAGKAPRGVKTDW 133
Query: 105 KMHEYRAIEGASNPSSAVIPKLR-HEFSLCRIYVKS 139
            MHEYR  +     + A    LR  ++ LCR+Y K 
Sbjct: 134 IMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKK 169

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	250
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-60
1ut7_A	171	No apical meristem protein; transcription regulati	8e-60

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  187 bits (478), Expect = 1e-60
 Identities = 62/162 (38%), Positives = 84/162 (51%), Gaps = 23/162 (14%)

Query: 3   ELPPGYRFFPTEEELVSFYL------------------INKLE--ELCGEKCQGDTEQWF 42
            LPPG+RF PT++ELV  YL                  + K +  +L  E+      +W+
Sbjct: 14  NLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDL-PERALFGAREWY 72

Query: 43  FFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKT 102
           FFTPR  +   G RP+R   +GYWKATG+   V     R +G+KK +VFY GKAP G KT
Sbjct: 73  FFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPR-GRTLGIKKALVFYAGKAPRGVKT 131

Query: 103 KWKMHEYRAIEGASNPSSAVIPKLR-HEFSLCRIYVKSESFR 143
            W MHEYR  +     + A    LR  ++ LCR+Y K   + 
Sbjct: 132 DWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWE 173

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  185 bits (472), Expect = 8e-60
 Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 26/161 (16%)

Query: 3   ELPPGYRFFPTEEELVSFYL------------------INKLE--ELCGEKCQGDTEQWF 42
            LPPG+RF+PT+EEL+  YL                  + K +   L  +   G+ E W+
Sbjct: 16  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE-WY 74

Query: 43  FFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKT 102
           FF+PR  +   G RP+R   SGYWKATG+   + +   + +G+KK +VFY GKAP G KT
Sbjct: 75  FFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE-GQRVGIKKALVFYIGKAPKGTKT 133

Query: 103 KWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSESFR 143
            W MHEYR IE +             ++ LCRIY K  S +
Sbjct: 134 NWIMHEYRLIEPSRRNG----STKLDDWVLCRIYKKQSSAQ 170

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	250
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=4.7e-49  Score=335.18  Aligned_cols=137  Identities=43%  Similarity=0.856  Sum_probs=109.5

Q ss_pred             CCCCCcEEcCCHHHHHHHHHHHhhh--------------------hhhccccCCCCceEEEEccccccccCCCCCccccc
Q 025570            3 ELPPGYRFFPTEEELVSFYLINKLE--------------------ELCGEKCQGDTEQWFFFTPRQEREERGGRPSRTTA   62 (250)
Q Consensus         3 ~LPpGfRF~PTDeELV~~YL~~Ki~--------------------~lp~~~~~g~~e~WYFFs~r~~k~~~G~R~~R~t~   62 (250)
                      .|||||||+|||||||.|||++||.                    +||+....++. +|||||++++++++|.|++|+|+
T Consensus        14 ~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g~~-ewYFFs~r~~ky~~g~R~nR~t~   92 (174)
T 3ulx_A           14 NLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAR-EWYFFTPRDRKYPNGSRPNRAAG   92 (174)
T ss_dssp             TCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSCSS-EEEEEEECCC-----CCSCEEET
T ss_pred             CCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccCCc-eEEEEeccccccCCCCCceeecC
Confidence            6999999999999999999999998                    45555555654 59999999999999999999999


Q ss_pred             CceeEecCCCeeEEcCCCeEEEEEEEEeeecCcCCCCCCcCeEEEEEEeCCCCCCCC-CCCCCCCCCceEEEEEEEecCC
Q 025570           63 SGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPS-SAVIPKLRHEFSLCRIYVKSES  141 (250)
Q Consensus        63 ~G~Wk~tG~~k~V~~~~g~~IG~KktlvFy~g~~p~g~kT~WvMhEYrl~~~~~~~~-~~~~p~~~~e~VLCRIy~K~~~  141 (250)
                      +||||++|++++|.+ +|.+||+||+|+||.|++|++.||+|+||||+|.+...... +.......++|||||||+|++.
T Consensus        93 ~G~WkatG~dk~I~~-~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K~~~  171 (174)
T 3ulx_A           93 NGYWKATGADKPVAP-RGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE  171 (174)
T ss_dssp             TEEEEECSCCEEECC-SSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEESCC-
T ss_pred             CceEccCCCCcEEee-CCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEcCCC
Confidence            999999999999987 47999999999999999999999999999999987543211 1111123478999999998753

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=2e-48  Score=330.60  Aligned_cols=135  Identities=45%  Similarity=0.880  Sum_probs=106.0

Q ss_pred             CCCCCCcEEcCCHHHHHHHHHHHhhh--------------------hhhccccCCCCceEEEEccccccccCCCCCcccc
Q 025570            2 EELPPGYRFFPTEEELVSFYLINKLE--------------------ELCGEKCQGDTEQWFFFTPRQEREERGGRPSRTT   61 (250)
Q Consensus         2 ~~LPpGfRF~PTDeELV~~YL~~Ki~--------------------~lp~~~~~g~~e~WYFFs~r~~k~~~G~R~~R~t   61 (250)
                      ..|||||||+|||||||.|||++||.                    +||+....++. +||||+++++++++|.|++|+|
T Consensus        15 ~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g~~-ewyFFs~r~~k~~~g~R~~R~t   93 (171)
T 1ut7_A           15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEK-EWYFFSPRDRKYPNGSRPNRVA   93 (171)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSS-EEEEEEECCC-------CCEEE
T ss_pred             cCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcCCc-cEEEEeccccccCCCCcccccC
Confidence            36999999999999999999999998                    45555545555 5999999999999999999999


Q ss_pred             cCceeEecCCCeeEEcCCCeEEEEEEEEeeecCcCCCCCCcCeEEEEEEeCCCCCCCCCCCCCCCCCceEEEEEEEecCC
Q 025570           62 ASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKSES  141 (250)
Q Consensus        62 ~~G~Wk~tG~~k~V~~~~g~~IG~KktlvFy~g~~p~g~kT~WvMhEYrl~~~~~~~~~~~~p~~~~e~VLCRIy~K~~~  141 (250)
                      ++||||++|++++|++ ++.+||+||+|+||++++|++.||+|+||||+|.....    .......++|||||||+|+.+
T Consensus        94 ~~G~Wk~tG~~k~I~~-~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~----~~~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A           94 GSGYWKATGTDKIIST-EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSR----RNGSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             TTEEEEEEEEEEEEEE-TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC------------CCEEEEEEEECC--
T ss_pred             CCCEEeccCCCceEEe-cCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCcc----ccCcccCCCEEEEEEEEcCCC
Confidence            9999999999999997 56999999999999999999999999999999987431    111234579999999999865


Q ss_pred             c
Q 025570          142 F  142 (250)
Q Consensus       142 ~  142 (250)
                      .
T Consensus       169 ~  169 (171)
T 1ut7_A          169 A  169 (171)
T ss_dssp             -
T ss_pred             C
Confidence            3

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	250
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	4e-41

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  137 bits (345), Expect = 4e-41
 Identities = 63/156 (40%), Positives = 84/156 (53%), Gaps = 26/156 (16%)

Query: 3   ELPPGYRFFPTEEELVSFYLINKLE--------------------ELCGEKCQGDTEQWF 42
            LPPG+RF+PT+EEL+  YL  K                       L  +   G+ E W+
Sbjct: 16  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE-WY 74

Query: 43  FFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKT 102
           FF+PR  +   G RP+R   SGYWKATG+   + S++ + +G+KK +VFY GKAP G KT
Sbjct: 75  FFSPRDRKYPNGSRPNRVAGSGYWKATGTD-KIISTEGQRVGIKKALVFYIGKAPKGTKT 133

Query: 103 KWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVK 138
            W MHEYR IE +    S        ++ LCRIY K
Sbjct: 134 NWIMHEYRLIEPSRRNGS----TKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	250
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-45  Score=309.07  Aligned_cols=131  Identities=46%  Similarity=0.916  Sum_probs=103.8

Q ss_pred             CCCCCcEEcCCHHHHHHHHHHHhhh--------------------hhhccccCCCCceEEEEccccccccCCCCCccccc
Q 025570            3 ELPPGYRFFPTEEELVSFYLINKLE--------------------ELCGEKCQGDTEQWFFFTPRQEREERGGRPSRTTA   62 (250)
Q Consensus         3 ~LPpGfRF~PTDeELV~~YL~~Ki~--------------------~lp~~~~~g~~e~WYFFs~r~~k~~~G~R~~R~t~   62 (250)
                      +|||||||+|||||||.|||++||.                    +||+....++. +||||+++.+++++|.|++|+|+
T Consensus        16 ~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~~~-~wyFft~~~~k~~~g~r~~R~~g   94 (166)
T d1ut7a_          16 SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEK-EWYFFSPRDRKYPNGSRPNRVAG   94 (166)
T ss_dssp             CCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSS-EEEEEEECCC-------CCEEET
T ss_pred             cCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccCcc-eEEEEeeeccccCCCCccccccC
Confidence            6999999999999999999999998                    34544444554 59999999999999999999999


Q ss_pred             CceeEecCCCeeEEcCCCeEEEEEEEEeeecCcCCCCCCcCeEEEEEEeCCCCCCCCCCCCCCCCCceEEEEEEEec
Q 025570           63 SGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSSAVIPKLRHEFSLCRIYVKS  139 (250)
Q Consensus        63 ~G~Wk~tG~~k~V~~~~g~~IG~KktlvFy~g~~p~g~kT~WvMhEYrl~~~~~~~~~~~~p~~~~e~VLCRIy~K~  139 (250)
                      +|+||++|+++.|.+ +|.+||+||+|+||+++++++.+|+|+||||+|.+....    ......++|||||||+|+
T Consensus        95 ~G~Wk~~g~~~~i~~-~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~----~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          95 SGYWKATGTDKIIST-EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             TEEEEEEEEEEEEEE-TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC------------CCEEEEEEEECC
T ss_pred             CCEecccCCCceEec-CCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccc----cCccccCCEEEEEEEecC
Confidence            999999999998876 789999999999999999999999999999999764321    122345789999999874