Citrus Sinensis ID: 025707
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 249 | 2.2.26 [Sep-21-2011] | |||||||
| C6TBN2 | 346 | Probable aldo-keto reduct | no | no | 0.919 | 0.661 | 0.777 | 1e-106 | |
| Q3L181 | 337 | Perakine reductase OS=Rau | N/A | no | 0.907 | 0.670 | 0.744 | 4e-97 | |
| Q84M96 | 346 | Probable aldo-keto reduct | yes | no | 0.907 | 0.653 | 0.638 | 9e-82 | |
| Q93ZN2 | 345 | Probable aldo-keto reduct | no | no | 0.899 | 0.649 | 0.654 | 6e-81 | |
| O22707 | 345 | Probable aldo-keto reduct | no | no | 0.903 | 0.652 | 0.647 | 1e-80 | |
| P40691 | 307 | Auxin-induced protein PCN | N/A | no | 0.851 | 0.690 | 0.671 | 2e-79 | |
| F4HPY8 | 330 | Probable aldo-keto reduct | no | no | 0.879 | 0.663 | 0.645 | 2e-79 | |
| Q7XT99 | 351 | Probable aldo-keto reduct | no | no | 0.895 | 0.635 | 0.643 | 1e-78 | |
| A2XRZ0 | 351 | Probable aldo-keto reduct | N/A | no | 0.895 | 0.635 | 0.643 | 1e-78 | |
| Q9ASZ9 | 345 | Probable aldo-keto reduct | no | no | 0.879 | 0.634 | 0.647 | 2e-78 |
| >sp|C6TBN2|AKR1_SOYBN Probable aldo-keto reductase 1 OS=Glycine max GN=AKR1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 178/229 (77%), Positives = 201/229 (87%)
Query: 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKY 65
+ Q+ VKLGTQG EVSKLG+GCM L+G YN PL E+DGIS+IK+AFSKGITFFDTAD Y
Sbjct: 3 QAQIQPVKLGTQGFEVSKLGFGCMGLTGAYNDPLQEQDGISVIKYAFSKGITFFDTADVY 62
Query: 66 GPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVE 125
G NE+L+GKALK+LPRE IQ+ATKFG GF + ++G+PEYVRSCCE L+RLDVE
Sbjct: 63 GANANELLVGKALKQLPREKIQIATKFGIASRGFPDMKIEGSPEYVRSCCETGLKRLDVE 122
Query: 126 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185
YIDLYYQHRVDTSVPIEET+GE+KKLVEEGK+KYIGLSEASPDTIRRAHA+HPITAVQ+E
Sbjct: 123 YIDLYYQHRVDTSVPIEETVGELKKLVEEGKVKYIGLSEASPDTIRRAHAIHPITAVQIE 182
Query: 186 WSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFL 234
WSLW RDIE EIVPLCRELGIGIVPY PLGRGFFGGK VVE+VP +S L
Sbjct: 183 WSLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKGVVENVPTNSSL 231
|
May interfere with the nodulation process and inhibits nodule development. Glycine max (taxid: 3847) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q3L181|PERR_RAUSE Perakine reductase OS=Rauvolfia serpentina GN=PR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 354 bits (908), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 169/227 (74%), Positives = 198/227 (87%), Gaps = 1/227 (0%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
+PRVKLGTQGLEVSKLG+GCM LSG YN L EE GI++IK AF+ GITFFDT+D YG
Sbjct: 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGEN 60
Query: 69 -TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
+NE LLGKALK+LPRE IQV TKFG E+GF+ V KGTP+YVRSCCEASL+RLDV+YI
Sbjct: 61 GSNEELLGKALKQLPREKIQVGTKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLDVDYI 120
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DL+Y HR+DT+VPIE T+GE+KKLVEEGKIKY+GLSEASPDTIRRAHAVHP+TA+Q+E+S
Sbjct: 121 DLFYIHRIDTTVPIEITMGELKKLVEEGKIKYVGLSEASPDTIRRAHAVHPVTALQIEYS 180
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFL 234
LW RDIE+EIVPLCR+LGIGIVPY P+GRG F GKA+ ES+P +S L
Sbjct: 181 LWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFAGKAIKESLPENSVL 227
|
Aldo-keto reductase involved in the biosynthesis of monoterpenoid indole alkaloids. Broad substrate specificity enzyme with a high selectivity in the group of alkaloids. Can use perakine, 19(S),20(R)-dihydro-peraksine-17,21-al, cinnamic aldehyde, p-coumaric aldehyde and 3-(3,4,5-trimethoxyphenyl)propanal as substrates, but not ketosteroids such as progesterone. NADPH could not be replaced by NADH. Rauvolfia serpentina (taxid: 4060) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 1 EC: 7 |
| >sp|Q84M96|ALKR2_ARATH Probable aldo-keto reductase 2 OS=Arabidopsis thaliana GN=AGD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 303 bits (775), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 145/227 (63%), Positives = 178/227 (78%), Gaps = 1/227 (0%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+V R+KLG+QGLEVS G GCM+LS Y +P E D I+++ HA + G+TFFDT+D YGP
Sbjct: 6 RVRRMKLGSQGLEVSAQGLGCMALSARYGAPKPETDAIALLHHAINSGVTFFDTSDMYGP 65
Query: 68 YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
TNE+LLGKALK+ +E +++ATKFGF + V+G PEYVR+ CEASL+RLD+ I
Sbjct: 66 ETNELLLGKALKDGVKEKVELATKFGFFIVEGEISEVRGDPEYVRAACEASLKRLDIACI 125
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DLYYQHR+DT VPIE T+ E+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWS
Sbjct: 126 DLYYQHRIDTRVPIEITMRELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWS 185
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFF-GGKAVVESVPLDSF 233
LW+RD E +I+P+CRELGIGIV Y PLGRGF G + E++ D F
Sbjct: 186 LWSRDAEEDIIPICRELGIGIVAYSPLGRGFLAAGPKLAENLENDDF 232
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q93ZN2|ALKR4_ARATH Probable aldo-keto reductase 4 OS=Arabidopsis thaliana GN=At1g60710 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 300 bits (768), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 148/226 (65%), Positives = 174/226 (76%), Gaps = 2/226 (0%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+KLG+QGLEVS G GCM LS Y +P E + I++I HA G+T DT+D YGP
Sbjct: 7 VRRMKLGSQGLEVSAQGLGCMGLSAFYGAPKPENEAIALIHHAIHSGVTLLDTSDIYGPE 66
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
TNE+LLGKALK+ RE +++ATKFG + V+G PEYVR+ CEASL+RLD+ ID
Sbjct: 67 TNEVLLGKALKDGVREKVELATKFG-ISYAEGKREVRGDPEYVRAACEASLKRLDIACID 125
Query: 129 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
LYYQHRVDT VPIE T+GE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWSL
Sbjct: 126 LYYQHRVDTRVPIEITMGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWSL 185
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESVPLDSF 233
W RD+E EI+P CRELGIGIV Y PLGRGFF G +VE++ D F
Sbjct: 186 WTRDVEEEIIPTCRELGIGIVAYSPLGRGFFASGPKLVENLEKDDF 231
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|O22707|ALKR3_ARATH Probable aldo-keto reductase 3 OS=Arabidopsis thaliana GN=At1g60690 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 299 bits (766), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/227 (64%), Positives = 175/227 (77%), Gaps = 2/227 (0%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+V R+KLG+QGLEVS G GCM L+G Y + E + I++I HA G+TF DT+D YGP
Sbjct: 6 RVRRIKLGSQGLEVSAQGLGCMGLTGHYGASKPETEAIALIHHAIHSGVTFLDTSDMYGP 65
Query: 68 YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
TNEILLGKALK+ RE +++ATKFG + + +KG P YVR+ CEASL+RLDV I
Sbjct: 66 ETNEILLGKALKDGVREKVELATKFG-ISYAEGNREIKGDPAYVRAACEASLKRLDVTCI 124
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DLYYQHR+DT VPIE T+GE+KKL+EEGKIKYIGLSEAS TIRRAH VHPITAVQLEWS
Sbjct: 125 DLYYQHRIDTRVPIEITMGELKKLIEEGKIKYIGLSEASASTIRRAHTVHPITAVQLEWS 184
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESVPLDSF 233
LW RD+E EIVP CRELGIGIV Y PLGRGFF G +VE++ + F
Sbjct: 185 LWTRDVEEEIVPTCRELGIGIVSYSPLGRGFFASGPKLVENLDNNDF 231
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P40691|A115_TOBAC Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 295 bits (756), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 166/216 (76%), Gaps = 4/216 (1%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+VPR+KLG+QGLEVS G GCM +S Y P E D I +I HA + GIT DT+D YGP
Sbjct: 7 KVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGP 66
Query: 68 YTNEILLGKALKELPRENIQVATKFGFV----ELGFTSVIVKGTPEYVRSCCEASLRRLD 123
+TNEILLGKALK RE + +ATKFG V + V G P YVR+ CEASL+RLD
Sbjct: 67 HTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLD 126
Query: 124 VEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQ 183
++ IDLYYQHRVDT VPIE T+GE+KKLVEEGK+KYIGLSEAS TIRRAHAVHPITAVQ
Sbjct: 127 IDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQ 186
Query: 184 LEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219
LEWSLW+RD+E EI+P CRELGIGIV Y PLGRGF
Sbjct: 187 LEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFL 222
|
Nicotiana tabacum (taxid: 4097) |
| >sp|F4HPY8|AKR6_ARATH Probable aldo-keto reductase 6 OS=Arabidopsis thaliana GN=At1g60750 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 295 bits (754), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/220 (64%), Positives = 172/220 (78%), Gaps = 1/220 (0%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE+ QV R+KLG+QGLEVS G GCM LS Y +P E + +++++HA + G+TF D
Sbjct: 1 MAEEA-CQVRRMKLGSQGLEVSAQGLGCMGLSDFYGAPTPETNAVALLRHAINAGVTFLD 59
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
T+D YGP TNE+LLGKALK+ R+ +++ATKFG +G PEYVR CEASL+
Sbjct: 60 TSDIYGPETNELLLGKALKDGLRDKVELATKFGITASEDGKFGFRGDPEYVRIACEASLK 119
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RL V IDLYYQHR+DT++PIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPIT
Sbjct: 120 RLGVTCIDLYYQHRIDTTLPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPIT 179
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220
AVQ+EWSLW+RD+E +I+P CRELGIGIV Y PLGRGF G
Sbjct: 180 AVQIEWSLWSRDVEEDIIPTCRELGIGIVAYSPLGRGFLG 219
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q7XT99|AKR2_ORYSJ Probable aldo-keto reductase 2 OS=Oryza sativa subsp. japonica GN=Os04g0338000 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 293 bits (749), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/227 (64%), Positives = 172/227 (75%), Gaps = 4/227 (1%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+KLG+QGLEVS G GCM +S Y P E D +++I HA + G+T DT+D YGP+
Sbjct: 11 VRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMVALIHHAVAAGVTLLDTSDIYGPH 70
Query: 69 TNEILLGKALKELPRENIQVATKFGFV-ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
TNE+LLGKAL+ R+ +++ATKFG E G V +G P YVR+ CE SLRRL V+ I
Sbjct: 71 TNELLLGKALQGGVRDKVELATKFGIAFEDGKRDV--RGDPAYVRAACEGSLRRLGVDSI 128
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DLYYQHRVD VPIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQLEWS
Sbjct: 129 DLYYQHRVDKKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWS 188
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFF-GGKAVVESVPLDSF 233
LW+RD+E +I+P CRELGIGIV Y PLGRGFF G +VES+ F
Sbjct: 189 LWSRDVEEDIIPTCRELGIGIVAYSPLGRGFFSAGAKLVESLSDQDF 235
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|A2XRZ0|AKR2_ORYSI Probable aldo-keto reductase 2 OS=Oryza sativa subsp. indica GN=OsI_15387 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 292 bits (748), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/227 (64%), Positives = 172/227 (75%), Gaps = 4/227 (1%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+KLG+QGLEVS G GCM +S Y P E D +++I HA + G+T DT+D YGP+
Sbjct: 11 VRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMVALIHHAVAAGVTLLDTSDIYGPH 70
Query: 69 TNEILLGKALKELPRENIQVATKFGFV-ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
TNE+LLGKAL+ R+ +++ATKFG E G V +G P YVR+ CE SLRRL V+ I
Sbjct: 71 TNELLLGKALQGGVRDKVELATKFGIAFEDGKRGV--RGDPAYVRAACEGSLRRLGVDSI 128
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DLYYQHRVD VPIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQLEWS
Sbjct: 129 DLYYQHRVDKKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWS 188
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFF-GGKAVVESVPLDSF 233
LW+RD+E +I+P CRELGIGIV Y PLGRGFF G +VES+ F
Sbjct: 189 LWSRDVEEDIIPTCRELGIGIVAYSPLGRGFFSAGAKLVESLSDQDF 235
|
Oryza sativa subsp. indica (taxid: 39946) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9ASZ9|ALKR5_ARATH Probable aldo-keto reductase 5 OS=Arabidopsis thaliana GN=At1g60730 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 291 bits (746), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/221 (64%), Positives = 171/221 (77%), Gaps = 2/221 (0%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+KLG+QGLEVS G GCM LS Y +P E + I++I HA G+TF DT+D YGP
Sbjct: 7 VRRIKLGSQGLEVSAQGLGCMGLSAFYGTPKPETEAIALIHHAIHSGVTFLDTSDIYGPE 66
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
TNE+LL KALK+ RE +++ATK+G + V KG P YVR+ CEASL R+DV ID
Sbjct: 67 TNELLLSKALKDGVREKVELATKYG-IRYAEGKVEFKGDPAYVRAACEASLMRVDVACID 125
Query: 129 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
LYYQHR+DT VPIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITA+Q+EWSL
Sbjct: 126 LYYQHRIDTRVPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITALQIEWSL 185
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESV 228
W+RD+E +I+P CRELGIGIV Y PLGRGFF G +VE++
Sbjct: 186 WSRDVEEDIIPTCRELGIGIVAYSPLGRGFFASGPKLVENL 226
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 249 | ||||||
| 356571605 | 345 | PREDICTED: LOW QUALITY PROTEIN: auxin-in | 0.931 | 0.672 | 0.775 | 1e-107 | |
| 255542314 | 343 | aldo/keto reductase, putative [Ricinus c | 0.947 | 0.688 | 0.755 | 1e-105 | |
| 449445274 | 347 | PREDICTED: probable aldo-keto reductase | 0.939 | 0.674 | 0.761 | 1e-105 | |
| 225451316 | 347 | PREDICTED: auxin-induced protein PCNT115 | 0.931 | 0.668 | 0.774 | 1e-104 | |
| 224125632 | 348 | predicted protein [Populus trichocarpa] | 0.939 | 0.672 | 0.754 | 1e-104 | |
| 378548275 | 346 | RecName: Full=Probable aldo-keto reducta | 0.919 | 0.661 | 0.777 | 1e-104 | |
| 356573095 | 346 | PREDICTED: LOW QUALITY PROTEIN: auxin-in | 0.927 | 0.667 | 0.780 | 1e-104 | |
| 356505965 | 351 | PREDICTED: auxin-induced protein PCNT115 | 0.943 | 0.669 | 0.762 | 1e-104 | |
| 225451312 | 342 | PREDICTED: auxin-induced protein PCNT115 | 0.911 | 0.663 | 0.780 | 1e-103 | |
| 116781851 | 339 | unknown [Picea sitchensis] | 0.907 | 0.666 | 0.810 | 1e-103 |
| >gi|356571605|ref|XP_003553967.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein PCNT115-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/232 (77%), Positives = 208/232 (89%)
Query: 5 KKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADK 64
+ +Q+PRVKLGTQGLEVSKLGYGCM L+G YN PL EE+GIS+IKHAFSKGITFFDT+D
Sbjct: 3 QSVQMPRVKLGTQGLEVSKLGYGCMGLTGAYNDPLPEEEGISVIKHAFSKGITFFDTSDM 62
Query: 65 YGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDV 124
YGP+ NEI+LGKA+K+LPRE IQ+ATKFG ++ + ++VKGTPEY RSCCEASL+RL V
Sbjct: 63 YGPHANEIVLGKAIKQLPREKIQIATKFGITKIDSSGMVVKGTPEYARSCCEASLKRLGV 122
Query: 125 EYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184
EYIDLYYQHRVD SVPIEETIGE+KKLVEEGK++YIGLSEASPDTIRRAHAVHPITAVQ+
Sbjct: 123 EYIDLYYQHRVDLSVPIEETIGELKKLVEEGKVRYIGLSEASPDTIRRAHAVHPITAVQM 182
Query: 185 EWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVC 236
EWSLW RDIE+EI+PLC+ELGIGIVPY PLGRGFFGGK V+E+V S L+
Sbjct: 183 EWSLWTRDIEDEIIPLCKELGIGIVPYSPLGRGFFGGKGVLETVSTVSSLIT 234
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542314|ref|XP_002512220.1| aldo/keto reductase, putative [Ricinus communis] gi|223548181|gb|EEF49672.1| aldo/keto reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/237 (75%), Positives = 209/237 (88%), Gaps = 1/237 (0%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MA++ Q+PR KLG+QGLEVSKLG+GCM L+G YNSPLS+EDGISI++HAF KGITFFD
Sbjct: 1 MAQEN-FQIPRTKLGSQGLEVSKLGFGCMGLTGVYNSPLSDEDGISILRHAFDKGITFFD 59
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
T+D YGP+TNEIL+GKALK+LPRE +Q+ATKFG V++ +IV G PEYVRS CEASL+
Sbjct: 60 TSDVYGPHTNEILVGKALKQLPREKVQLATKFGIVKMPPPKMIVNGIPEYVRSSCEASLK 119
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RL ++YIDLYYQHRVDTSVPIEET+ E+KKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT
Sbjct: 120 RLGIDYIDLYYQHRVDTSVPIEETMSELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 179
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCF 237
A+Q+EWSLW RD+E EIVPLC+ELGIGIVPY PLGRGFF GK VVE +P +S LV +
Sbjct: 180 ALQIEWSLWTRDVEEEIVPLCKELGIGIVPYSPLGRGFFAGKGVVERLPANSMLVGY 236
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445274|ref|XP_004140398.1| PREDICTED: probable aldo-keto reductase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/235 (76%), Positives = 210/235 (89%), Gaps = 1/235 (0%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE + +Q+PRV+LG+QGLEVSKLG+GCM L+G YNS LS+EDGISI+K AF++GITFFD
Sbjct: 1 MAEGQGVQIPRVQLGSQGLEVSKLGFGCMGLTGVYNSCLSDEDGISILKEAFNRGITFFD 60
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
TAD YGP++NEIL+GKALK LPRE +Q+ATKFG +G +S+ V GTPEYVRSCCEASL+
Sbjct: 61 TADVYGPHSNEILVGKALKRLPREKVQIATKFGITRIG-SSMTVNGTPEYVRSCCEASLK 119
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RLD++YIDLYYQHR DTS IEET+GE+KKLVEEGKIKYIGLSEASPDTI+RAHA+HPIT
Sbjct: 120 RLDIDYIDLYYQHRTDTSTSIEETMGELKKLVEEGKIKYIGLSEASPDTIKRAHAIHPIT 179
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
A+Q+EWS+W RDIE EIVPLCRELGIGIVPY PLGRGFF GKAVVES+P+ S L
Sbjct: 180 ALQMEWSVWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFAGKAVVESLPVGSHLA 234
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451316|ref|XP_002278850.1| PREDICTED: auxin-induced protein PCNT115 isoform 1 [Vitis vinifera] gi|298204869|emb|CBI34176.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/239 (77%), Positives = 210/239 (87%), Gaps = 7/239 (2%)
Query: 1 MAEDKKL--QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITF 58
MAE++++ Q+PRVKLG QGLEVSKLG+GCM LSG YN+P+ ++ GI+IIKHAFSKGITF
Sbjct: 1 MAEEQRVEVQIPRVKLGNQGLEVSKLGFGCMGLSGVYNNPVPDDVGIAIIKHAFSKGITF 60
Query: 59 FDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGF---TSVIVKGTPEYVRSCC 115
FDTAD YGP+TNE+L+GKALKELPRE IQ+ATKFG V GF T + V GTP+YVRSCC
Sbjct: 61 FDTADGYGPFTNEVLIGKALKELPREKIQLATKFGIV--GFDPATGMTVNGTPKYVRSCC 118
Query: 116 EASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHA 175
EASL+RLDVEYIDLYYQHRVD SVPIEET+ E+KKLV EGKIKYIGLSE SPDTIRRAHA
Sbjct: 119 EASLKRLDVEYIDLYYQHRVDKSVPIEETMEELKKLVAEGKIKYIGLSEPSPDTIRRAHA 178
Query: 176 VHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFL 234
VHPITA+Q+EWSLW RDIE EIVPLCRELGIGIVPY PLGRGFFGGK V E+ P ++FL
Sbjct: 179 VHPITALQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKVVDENAPANTFL 237
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125632|ref|XP_002319637.1| predicted protein [Populus trichocarpa] gi|222858013|gb|EEE95560.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/236 (75%), Positives = 211/236 (89%), Gaps = 2/236 (0%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE++K+ +PRVKLG QGLEVSKLG+GCM LSG YN+PL EE GISIIK A+SKGITFFD
Sbjct: 1 MAEEQKVIIPRVKLGNQGLEVSKLGFGCMGLSGMYNAPLPEEVGISIIKEAYSKGITFFD 60
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELG--FTSVIVKGTPEYVRSCCEAS 118
TAD YGP+TNEIL+GKALK LPRE IQ+ATKFG V G F + + G+PEY+R+CC+AS
Sbjct: 61 TADVYGPHTNEILVGKALKHLPREKIQLATKFGIVPNGSDFKNCAINGSPEYIRACCDAS 120
Query: 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHP 178
L+RLD+EYIDLYYQHR DTSVPIEET+GE+KKLVEEGK+KYIGLSEASPDTI+RAHAVHP
Sbjct: 121 LKRLDLEYIDLYYQHRTDTSVPIEETMGELKKLVEEGKVKYIGLSEASPDTIKRAHAVHP 180
Query: 179 ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFL 234
I+AVQ+EWSLW+RDIE EI+PLCRELGI +VPY P+GRGFFGG+AV+ES+P ++ L
Sbjct: 181 ISAVQMEWSLWSRDIEEEIIPLCRELGIAVVPYSPIGRGFFGGRAVMESLPSETVL 236
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|378548275|sp|C6TBN2.1|AKR1_SOYBN RecName: Full=Probable aldo-keto reductase 1; Short=GmAKR1 gi|255637828|gb|ACU19234.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/229 (77%), Positives = 201/229 (87%)
Query: 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKY 65
+ Q+ VKLGTQG EVSKLG+GCM L+G YN PL E+DGIS+IK+AFSKGITFFDTAD Y
Sbjct: 3 QAQIQPVKLGTQGFEVSKLGFGCMGLTGAYNDPLQEQDGISVIKYAFSKGITFFDTADVY 62
Query: 66 GPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVE 125
G NE+L+GKALK+LPRE IQ+ATKFG GF + ++G+PEYVRSCCE L+RLDVE
Sbjct: 63 GANANELLVGKALKQLPREKIQIATKFGIASRGFPDMKIEGSPEYVRSCCETGLKRLDVE 122
Query: 126 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185
YIDLYYQHRVDTSVPIEET+GE+KKLVEEGK+KYIGLSEASPDTIRRAHA+HPITAVQ+E
Sbjct: 123 YIDLYYQHRVDTSVPIEETVGELKKLVEEGKVKYIGLSEASPDTIRRAHAIHPITAVQIE 182
Query: 186 WSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFL 234
WSLW RDIE EIVPLCRELGIGIVPY PLGRGFFGGK VVE+VP +S L
Sbjct: 183 WSLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKGVVENVPTNSSL 231
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356573095|ref|XP_003554700.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein PCNT115-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/232 (78%), Positives = 207/232 (89%), Gaps = 1/232 (0%)
Query: 5 KKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADK 64
+ +++PRVKLGTQGLEVSKLGYGCM L+G YN PL EE+GISIIKHAFSKGITFFDT+D
Sbjct: 3 QSVEIPRVKLGTQGLEVSKLGYGCMGLTGAYNDPLPEEEGISIIKHAFSKGITFFDTSDI 62
Query: 65 YGP-YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLD 123
YGP + NEI++GKALK+LPRE IQ+ATKFG ++ + + VKGTPEY RSCCEASL+RL
Sbjct: 63 YGPDHANEIVVGKALKQLPREKIQIATKFGITKIDSSGMFVKGTPEYARSCCEASLKRLG 122
Query: 124 VEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQ 183
VEYIDLYYQHRVD SVPIEETIGE+KKLVEEGK++YIGLSEASPDTIRRAHAVHPITAVQ
Sbjct: 123 VEYIDLYYQHRVDLSVPIEETIGELKKLVEEGKVRYIGLSEASPDTIRRAHAVHPITAVQ 182
Query: 184 LEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
+EWSLW RDIE+EI+PLC+ELGIGIVPY PLGRGFFGGK V+E+V S LV
Sbjct: 183 MEWSLWTRDIEDEIIPLCKELGIGIVPYSPLGRGFFGGKGVLETVSTVSSLV 234
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356505965|ref|XP_003521759.1| PREDICTED: auxin-induced protein PCNT115-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/236 (76%), Positives = 206/236 (87%), Gaps = 1/236 (0%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE + +Q+P+VKLGTQGL VSKLG GCM+LSG YN PL EE+GIS+IKHAFS+GITFFD
Sbjct: 1 MAEAESVQIPQVKLGTQGLVVSKLGLGCMTLSGRYNDPLPEEEGISVIKHAFSQGITFFD 60
Query: 61 TADKYG-PYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119
T+D YG + NE LLGKALK+LPRE IQVATKFG F + +KGTPEYVRSCCEASL
Sbjct: 61 TSDLYGLDHANEFLLGKALKQLPREKIQVATKFGVAVAKFPNFQIKGTPEYVRSCCEASL 120
Query: 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPI 179
+RLDVEYIDLYYQHR+D +VPIEET+GE+KKLVEEGK+KYIGLSEASPDTIRRAHAVHPI
Sbjct: 121 KRLDVEYIDLYYQHRIDQTVPIEETVGELKKLVEEGKVKYIGLSEASPDTIRRAHAVHPI 180
Query: 180 TAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
TA+Q+EWSLW RDIE EI+PLCRELGIGIVPY PLGRGFFGGK V+E++P + L
Sbjct: 181 TALQIEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKGVLENMPASTVLT 236
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451312|ref|XP_002278643.1| PREDICTED: auxin-induced protein PCNT115 [Vitis vinifera] gi|298204874|emb|CBI34181.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/232 (78%), Positives = 204/232 (87%), Gaps = 5/232 (2%)
Query: 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKY 65
++Q+PRVKLG QGLEVSKLG+GCM LSG YN+P+ ++ GI+IIKHAFSKGITFFDTAD Y
Sbjct: 3 EIQIPRVKLGNQGLEVSKLGFGCMGLSGVYNNPVPDDVGIAIIKHAFSKGITFFDTADVY 62
Query: 66 GPYTNEILLGKALKELPRENIQVATKFGFVELGF---TSVIVKGTPEYVRSCCEASLRRL 122
GP+TNE+L+GKALKELPRE IQ+ATKFG GF T + V GTP+YVRSCCEASL+RL
Sbjct: 63 GPFTNEVLIGKALKELPREKIQLATKFGIA--GFDPATGMTVNGTPKYVRSCCEASLKRL 120
Query: 123 DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAV 182
DVEYIDLYYQHRVD SVPIEET+ E+KKLV EGKIKYIGLSE SPDTIRRAHAVHPITA+
Sbjct: 121 DVEYIDLYYQHRVDKSVPIEETMEELKKLVAEGKIKYIGLSEPSPDTIRRAHAVHPITAL 180
Query: 183 QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFL 234
Q+EWSLW RDIE EIVPLCRELGIGIVPY PLGRGFFGGK V E+ P ++FL
Sbjct: 181 QMEWSLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKVVDENAPANTFL 232
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116781851|gb|ABK22267.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
|---|
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/227 (81%), Positives = 202/227 (88%), Gaps = 1/227 (0%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
+PRVKLG QGLEVSKLGYGCM L+G YN+P+SEEDGISIIK+AF KGITFFDTAD YG
Sbjct: 6 IPRVKLGNQGLEVSKLGYGCMGLTGIYNNPVSEEDGISIIKYAFEKGITFFDTADVYGST 65
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
NE+L+GKALK+LPREN+Q+ATKFG V + + KGTPEYVR CCEASL+RLDVEYID
Sbjct: 66 KNEVLVGKALKQLPRENVQLATKFGIVMID-GKMDAKGTPEYVRKCCEASLKRLDVEYID 124
Query: 129 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
LYYQHRVDT+VPIEETIGE+KKLVEEGKIKYIGLSEAS DTIRRAHAVHPITAVQLEWSL
Sbjct: 125 LYYQHRVDTTVPIEETIGELKKLVEEGKIKYIGLSEASVDTIRRAHAVHPITAVQLEWSL 184
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
W RDIE IVP+CRELGIGIVPY PLGRGFF GKAVVES+P +S LV
Sbjct: 185 WTRDIEESIVPVCRELGIGIVPYSPLGRGFFSGKAVVESLPENSSLV 231
|
Source: Picea sitchensis Species: Picea sitchensis Genus: Picea Family: Pinaceae Order: Coniferales Class: Coniferopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 249 | ||||||
| TAIR|locus:2036591 | 346 | AT1G60680 "AT1G60680" [Arabido | 0.919 | 0.661 | 0.633 | 9.3e-75 | |
| TAIR|locus:2036504 | 345 | ATB2 [Arabidopsis thaliana (ta | 0.891 | 0.643 | 0.656 | 9.3e-75 | |
| TAIR|locus:2036611 | 345 | AT1G60690 "AT1G60690" [Arabido | 0.903 | 0.652 | 0.650 | 1.2e-74 | |
| TAIR|locus:2036551 | 330 | AT1G60750 [Arabidopsis thalian | 0.879 | 0.663 | 0.645 | 1.7e-73 | |
| TAIR|locus:2196446 | 344 | AT1G10810 "AT1G10810" [Arabido | 0.879 | 0.636 | 0.642 | 4.3e-70 | |
| TIGR_CMR|SPO_A0345 | 327 | SPO_A0345 "oxidoreductase, ald | 0.839 | 0.639 | 0.549 | 2.9e-55 | |
| TIGR_CMR|GSU_3126 | 334 | GSU_3126 "oxidoreductase, aldo | 0.835 | 0.622 | 0.516 | 3e-53 | |
| UNIPROTKB|G4NAH9 | 341 | MGG_09715 "Aldo-keto reductase | 0.847 | 0.618 | 0.445 | 5.7e-43 | |
| POMBASE|SPAC1F7.12 | 340 | yak3 "aldose reductase ARK13 f | 0.851 | 0.623 | 0.431 | 3.6e-41 | |
| ASPGD|ASPL0000051701 | 339 | AN10217 [Emericella nidulans ( | 0.855 | 0.628 | 0.420 | 1.6e-38 |
| TAIR|locus:2036591 AT1G60680 "AT1G60680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 147/232 (63%), Positives = 180/232 (77%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE +V R+KLG+QGLEVS G GCM+LS Y +P E D I+++ HA + G+TFFD
Sbjct: 1 MAE--ACRVRRMKLGSQGLEVSAQGLGCMALSARYGAPKPETDAIALLHHAINSGVTFFD 58
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
T+D YGP TNE+LLGKALK+ +E +++ATKFGF + V+G PEYVR+ CEASL+
Sbjct: 59 TSDMYGPETNELLLGKALKDGVKEKVELATKFGFFIVEGEISEVRGDPEYVRAACEASLK 118
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RLD+ IDLYYQHR+DT VPIE T+ E+KKLVEEGKIKYIGLSEAS TIRRAHAVHPIT
Sbjct: 119 RLDIACIDLYYQHRIDTRVPIEITMRELKKLVEEGKIKYIGLSEASASTIRRAHAVHPIT 178
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESVPLD 231
AVQ+EWSLW+RD E +I+P+CRELGIGIV Y PLGRGF G + E++ D
Sbjct: 179 AVQIEWSLWSRDAEEDIIPICRELGIGIVAYSPLGRGFLAAGPKLAENLEND 230
|
|
| TAIR|locus:2036504 ATB2 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 147/224 (65%), Positives = 173/224 (77%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+KLG+QGLEVS G GCM LS Y +P E + I++I HA G+T DT+D YGP
Sbjct: 7 VRRMKLGSQGLEVSAQGLGCMGLSAFYGAPKPENEAIALIHHAIHSGVTLLDTSDIYGPE 66
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
TNE+LLGKALK+ RE +++ATKFG + V+G PEYVR+ CEASL+RLD+ ID
Sbjct: 67 TNEVLLGKALKDGVREKVELATKFG-ISYAEGKREVRGDPEYVRAACEASLKRLDIACID 125
Query: 129 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
LYYQHRVDT VPIE T+GE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWSL
Sbjct: 126 LYYQHRVDTRVPIEITMGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWSL 185
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESVPLD 231
W RD+E EI+P CRELGIGIV Y PLGRGFF G +VE++ D
Sbjct: 186 WTRDVEEEIIPTCRELGIGIVAYSPLGRGFFASGPKLVENLEKD 229
|
|
| TAIR|locus:2036611 AT1G60690 "AT1G60690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 149/229 (65%), Positives = 176/229 (76%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE +V R+KLG+QGLEVS G GCM L+G Y + E + I++I HA G+TF D
Sbjct: 1 MAES--CRVRRIKLGSQGLEVSAQGLGCMGLTGHYGASKPETEAIALIHHAIHSGVTFLD 58
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
T+D YGP TNEILLGKALK+ RE +++ATKFG + + +KG P YVR+ CEASL+
Sbjct: 59 TSDMYGPETNEILLGKALKDGVREKVELATKFG-ISYAEGNREIKGDPAYVRAACEASLK 117
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RLDV IDLYYQHR+DT VPIE T+GE+KKL+EEGKIKYIGLSEAS TIRRAH VHPIT
Sbjct: 118 RLDVTCIDLYYQHRIDTRVPIEITMGELKKLIEEGKIKYIGLSEASASTIRRAHTVHPIT 177
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESV 228
AVQLEWSLW RD+E EIVP CRELGIGIV Y PLGRGFF G +VE++
Sbjct: 178 AVQLEWSLWTRDVEEEIVPTCRELGIGIVSYSPLGRGFFASGPKLVENL 226
|
|
| TAIR|locus:2036551 AT1G60750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 142/220 (64%), Positives = 172/220 (78%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE+ QV R+KLG+QGLEVS G GCM LS Y +P E + +++++HA + G+TF D
Sbjct: 1 MAEEA-CQVRRMKLGSQGLEVSAQGLGCMGLSDFYGAPTPETNAVALLRHAINAGVTFLD 59
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
T+D YGP TNE+LLGKALK+ R+ +++ATKFG +G PEYVR CEASL+
Sbjct: 60 TSDIYGPETNELLLGKALKDGLRDKVELATKFGITASEDGKFGFRGDPEYVRIACEASLK 119
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RL V IDLYYQHR+DT++PIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPIT
Sbjct: 120 RLGVTCIDLYYQHRIDTTLPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPIT 179
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220
AVQ+EWSLW+RD+E +I+P CRELGIGIV Y PLGRGF G
Sbjct: 180 AVQIEWSLWSRDVEEDIIPTCRELGIGIVAYSPLGRGFLG 219
|
|
| TAIR|locus:2196446 AT1G10810 "AT1G10810" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 142/221 (64%), Positives = 169/221 (76%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+KLG+QGLEVS G GCM LS + E D I++I HA + GIT DT+D YGP
Sbjct: 7 VRRIKLGSQGLEVSAQGLGCMGLSIFDGTTKVETDLIALIHHAINSGITLLDTSDIYGPE 66
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
TNE+LLG+ALK+ RE +++ATKFG + L + +G P YVR+ CEASLRRL V ID
Sbjct: 67 TNELLLGQALKDGMREKVELATKFGLL-LKDQKLGYRGDPAYVRAACEASLRRLGVSCID 125
Query: 129 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
LYYQHR+DT+VPIE TIGE+KKLVEEGKIKYIGLSEA TIRRAHAVHP+TAVQLEWSL
Sbjct: 126 LYYQHRIDTTVPIEVTIGELKKLVEEGKIKYIGLSEACASTIRRAHAVHPLTAVQLEWSL 185
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESV 228
W+RD+E +I+P CRELGIGIV Y PLG GFF G +ES+
Sbjct: 186 WSRDVEEDIIPTCRELGIGIVAYSPLGLGFFAAGPKFIESM 226
|
|
| TIGR_CMR|SPO_A0345 SPO_A0345 "oxidoreductase, aldo/keto reductase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 117/213 (54%), Positives = 146/213 (68%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN 70
R KLG Q LEVS +G GCM +S Y P +E + ++ A GI FFDTAD YGP+ N
Sbjct: 3 RRKLG-QDLEVSAIGLGCMGMSEFYG-PRDDEKSLDVMSRAVVLGIDFFDTADMYGPHHN 60
Query: 71 EILLGKALKELPRENIQVATKFGFVEL-GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
E L+G L++ R IQVATKFG V G + + Y R+ CE SLRRL V+ IDL
Sbjct: 61 EELIGTFLRQ-SRARIQVATKFGIVRNPGEYKRSLDNSASYARTACEGSLRRLGVDCIDL 119
Query: 130 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLW 189
YY HRV+T+ PIEET+ + LV+EGKI IGL E S +T+RRAHAVHP+TAVQ E+SLW
Sbjct: 120 YYVHRVNTNQPIEETMEGLAALVKEGKIARIGLCEVSAETLRRAHAVHPVTAVQTEYSLW 179
Query: 190 ARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
+R++EN ++P CR LGIG VPY PLGRGF G+
Sbjct: 180 SREVENSVLPTCRALGIGFVPYSPLGRGFLTGR 212
|
|
| TIGR_CMR|GSU_3126 GSU_3126 "oxidoreductase, aldo/keto reductase family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 111/215 (51%), Positives = 147/215 (68%)
Query: 14 LGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEIL 73
LG GLEVS LG GCM +S Y P E+ I++++ A +GITFFDTA+ YGP+ NE L
Sbjct: 6 LGKSGLEVSALGLGCMGMSFSYGPPKDREEMIALLRTAVERGITFFDTAEVYGPFINEEL 65
Query: 74 LGKALKELPRENIQVATKFGF---VE---LGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
+G+AL L RE + +ATKFGF V+ + ++ PE++R+ EASLRRL + I
Sbjct: 66 VGEALAPL-RERVVIATKFGFDTSVDPRAMKGQGPVLNSRPEHIRAVAEASLRRLRTDVI 124
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DL+YQHRVD +VPIEE G +K+L+ EGK+K+ GLSEA +T+RRAHAV P+ VQ E+S
Sbjct: 125 DLFYQHRVDPAVPIEEVAGAVKELIREGKVKHFGLSEAGIETVRRAHAVQPVACVQNEYS 184
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
LW R E ++ ELGIG+V Y PLG+GF GK
Sbjct: 185 LWFRRPEEGLLQALEELGIGLVAYSPLGKGFLTGK 219
|
|
| UNIPROTKB|G4NAH9 MGG_09715 "Aldo-keto reductase yakc" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 98/220 (44%), Positives = 137/220 (62%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
Q+P ++G G EV+ +G+G M LS Y + SEE+ ++ A+ G T +DTAD YG
Sbjct: 6 QIPTRRMGKDGPEVACIGFGLMGLSFGYGAVESEEERFKVLDRAWEIGATNWDTADIYGD 65
Query: 68 YTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVE 125
+E L+GK K P R++I +ATKFG V ++ +PEY R S RL V+
Sbjct: 66 --SEDLVGKWFKMHPERRKDIFLATKFG-VTGTIENLSANSSPEYCRQASRRSFERLGVD 122
Query: 126 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185
Y+DLYY HR+ SVP+E+TI M +LV+EGK+KY+G+SE S ++RRAH VHPI AVQ+E
Sbjct: 123 YVDLYYVHRLTESVPVEKTIEAMAELVKEGKVKYLGMSECSSSSVRRAHKVHPIAAVQVE 182
Query: 186 WSLWARDIENE----IVPLCRELGIGIVPYCPLGRGFFGG 221
++ W IE + ++ CRELGI +V Y P RG G
Sbjct: 183 YNPWDLAIEGDEGTNLLATCRELGISVVAYSPFSRGLLTG 222
|
|
| POMBASE|SPAC1F7.12 yak3 "aldose reductase ARK13 family YakC" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 95/220 (43%), Positives = 136/220 (61%)
Query: 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG 66
+ +P K+G V +G+GCM L Y P SEE +++ HA G TF+D++D YG
Sbjct: 1 MSIPTRKIGND--TVPAIGFGCMGLHAMYG-PSSEEANQAVLTHAADLGCTFWDSSDMYG 57
Query: 67 PYTNEILLGKALKELPR-ENIQVATKFGFVELGFTSVI-VKGTPEYVRSCCEASLRRLDV 124
NE +G+ K+ R + I +ATKFG+ + T + + P+Y+ + SL+RL +
Sbjct: 58 FGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGI 117
Query: 125 EYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184
+ IDLYY HR PIE+ +G +KK VE GKI+YIGLSE S +TIRRA AV+P++AVQ+
Sbjct: 118 DCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQV 177
Query: 185 EWSLWARDIENE---IVPLCRELGIGIVPYCPLGRGFFGG 221
E+S ++ +IE ++ CRE I IV Y PLGRGF G
Sbjct: 178 EYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTG 217
|
|
| ASPGD|ASPL0000051701 AN10217 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 93/221 (42%), Positives = 135/221 (61%)
Query: 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG 66
+ +P LG G +V +LG+G M LS Y +E+ ++++ A+ G TF+DTA YG
Sbjct: 1 MTLPTRPLGKDGPQVPRLGFGTMGLSAFYGPTKPDEERLAVLDRAYELGETFWDTAMLYG 60
Query: 67 PYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDV 124
+E L+G+ P R +I +ATKF F + V + E + CC SLRRL +
Sbjct: 61 D--SEELIGRWFAANPGKRADIFLATKFYFRWVNGERV-TDTSYENCKRCCNESLRRLGI 117
Query: 125 EYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184
+ IDL+Y HR+D PIEET+ + +L EEGKI+YIGLSE S D++RRA VH + AVQ+
Sbjct: 118 DTIDLFYAHRLDPKTPIEETMKALAELKEEGKIRYIGLSECSSDSLRRACKVHHVAAVQV 177
Query: 185 EWSLWARDIENEIVPL---CRELGIGIVPYCPLGRGFFGGK 222
E+S ++ +IE+E + L RELG+ +V Y PL RG G+
Sbjct: 178 EYSPFSLEIESEQIGLLKTARELGVAVVAYSPLSRGILSGQ 218
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q84M96 | ALKR2_ARATH | 1, ., 1, ., 1, ., - | 0.6387 | 0.9076 | 0.6531 | yes | no |
| Q3L181 | PERR_RAUSE | 1, ., 1, ., 1, ., 3, 1, 7 | 0.7444 | 0.9076 | 0.6706 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 249 | |||
| cd06660 | 285 | cd06660, Aldo_ket_red, Aldo-keto reductases (AKRs) | 1e-86 | |
| COG0667 | 316 | COG0667, Tas, Predicted oxidoreductases (related t | 2e-83 | |
| pfam00248 | 277 | pfam00248, Aldo_ket_red, Aldo/keto reductase famil | 2e-69 | |
| COG0656 | 280 | COG0656, ARA1, Aldo/keto reductases, related to di | 2e-36 | |
| COG4989 | 298 | COG4989, COG4989, Predicted oxidoreductase [Genera | 4e-30 | |
| PLN02587 | 314 | PLN02587, PLN02587, L-galactose dehydrogenase | 6e-27 | |
| COG1453 | 391 | COG1453, COG1453, Predicted oxidoreductases of the | 7e-26 | |
| PRK09912 | 346 | PRK09912, PRK09912, L-glyceraldehyde 3-phosphate r | 1e-23 | |
| PRK10376 | 290 | PRK10376, PRK10376, putative oxidoreductase; Provi | 6e-22 | |
| TIGR01293 | 317 | TIGR01293, Kv_beta, voltage-dependent potassium ch | 2e-20 | |
| PRK10625 | 346 | PRK10625, tas, putative aldo-keto reductase; Provi | 6e-16 | |
| PRK11565 | 275 | PRK11565, dkgA, 2,5-diketo-D-gluconate reductase A | 3e-10 | |
| PRK11172 | 267 | PRK11172, dkgB, 2,5-diketo-D-gluconate reductase B | 1e-06 |
| >gnl|CDD|119408 cd06660, Aldo_ket_red, Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 1e-86
Identities = 92/229 (40%), Positives = 128/229 (55%), Gaps = 11/229 (4%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN 70
LG GL+VS+LG G L G Y + EE+ + ++ A GI F DTAD YG +
Sbjct: 1 YRTLGKTGLKVSRLGLGTWQLGGGY---VDEEEAAAAVRAALDAGINFIDTADVYGDGES 57
Query: 71 EILLGKALKELP-RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
E LLG+ALKE RE + +ATK G +PE++R E SL+RL +YIDL
Sbjct: 58 EELLGEALKERGPREEVFIATKVGPRPGDG----RDLSPEHIRRAVEESLKRLGTDYIDL 113
Query: 130 YYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEW 186
Y H D P IEET+ +++LV+EGKI+ IG+S S + + A A P Q+E+
Sbjct: 114 YLLHWPDPDTPDIEETLRALEELVKEGKIRAIGVSNFSAEQLEEALAAAGVPPAVNQVEY 173
Query: 187 SLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
+L R E E++P CRE GIG++ Y PL G GK + + P + L+
Sbjct: 174 NLLDRQAEEELLPYCREHGIGVIAYSPLAGGLLTGKYLPGAPPPEGDLL 222
|
AKRs are present in all phyla and are of importance to both health and industrial applications. Members have very distinct functions and include the prokaryotic 2,5-diketo-D-gluconic acid reductases and beta-keto ester reductases, the eukaryotic aldose reductases, aldehyde reductases, hydroxysteroid dehydrogenases, steroid 5beta-reductases, potassium channel beta-subunits and aflatoxin aldehyde reductases, among others. Length = 285 |
| >gnl|CDD|223739 COG0667, Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 2e-83
Identities = 96/214 (44%), Positives = 131/214 (61%), Gaps = 4/214 (1%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
+LG GL+VS LG G M+L G + E + I I+ A GI FFDTAD YG +E
Sbjct: 4 RRLGRSGLKVSPLGLGTMTLGGDTDDE-EEAEAIEILDAALDAGINFFDTADVYGDGRSE 62
Query: 72 ILLGKALKELP-RENIQVATKFGFV-ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
+LG+ALKE R+ + +ATK G+ + + + +++R EASL+RL +YIDL
Sbjct: 63 EILGEALKERGRRDKVVIATKVGYRPGDPGPNGVFGLSRDHIRRAVEASLKRLGTDYIDL 122
Query: 130 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV-HPITAVQLEWSL 188
Y HR D PIEET+ + +LV EGKI+YIG+S S + I A AV PI ++Q E++L
Sbjct: 123 YQLHRPDPETPIEETLEALDELVREGKIRYIGVSNYSAEQIAEALAVAAPIDSLQPEYNL 182
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
RD E E++PLCRE GIG++ Y PL G GK
Sbjct: 183 LERDAEKELLPLCREEGIGLLAYSPLASGLLTGK 216
|
Length = 316 |
| >gnl|CDD|215817 pfam00248, Aldo_ket_red, Aldo/keto reductase family | Back alignment and domain information |
|---|
Score = 214 bits (547), Expect = 2e-69
Identities = 82/203 (40%), Positives = 120/203 (59%), Gaps = 10/203 (4%)
Query: 23 KLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKEL- 81
+LG G SL +S+E+ + +++ A GI DTA+ YG +E LLG+ALK+
Sbjct: 1 RLGLGTWSLG---GLAISKEEALELLRAALEAGINLIDTAEVYGDGPSEELLGEALKKYV 57
Query: 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPI 141
PR+ + +ATK G G+ E ++ E SL+RL +Y+DLY H D S+PI
Sbjct: 58 PRDEVFIATKVGPPGPPPDD----GSRENIKKSIEESLKRLGTDYLDLYLLHWPDPSLPI 113
Query: 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRA--HAVHPITAVQLEWSLWARDIENEIVP 199
EET+ +++L +EGKI++IG+S S + +R A H PI VQ+E+SL R E ++
Sbjct: 114 EETLEALEELKKEGKIRHIGVSNFSVEQLREALEHGKVPIVVVQVEYSLLRRLAEEGLLE 173
Query: 200 LCRELGIGIVPYCPLGRGFFGGK 222
LC+E GIGI+ Y PLG G GK
Sbjct: 174 LCQENGIGIIAYSPLGGGLLTGK 196
|
This family includes a number of K+ ion channel beta chain regulatory domains - these are reported to have oxidoreductase activity. Length = 277 |
| >gnl|CDD|223729 COG0656, ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 2e-36
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
+V L G+E+ +G G + +E + ++ A G DTA+ YG
Sbjct: 4 TKVTLNN-GVEIPAIGLGTWQIGD-------DEWAVRAVRAALELGYRLIDTAEIYG--- 52
Query: 70 NEILLGKALKEL--PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
NE +G+A+KE PRE + + TK +LG+ + ++ EASL+RL ++Y+
Sbjct: 53 NEEEVGEAIKESGVPREELFITTKVWPSDLGYDETL--------KAL-EASLKRLGLDYV 103
Query: 128 DLYYQH--RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA--HAVHPITAVQ 183
DLY H + V IEET +++LV+EG I+ IG+S + + A Q
Sbjct: 104 DLYLIHWPVPNKYVVIEETWKALEELVDEGLIRAIGVSNFGVEHLEELLSLAKVKPAVNQ 163
Query: 184 LEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+E+ + R E++P C+ GI + Y PL +G
Sbjct: 164 IEYHPYLRQP--ELLPFCQRHGIAVEAYSPLAKG 195
|
Length = 280 |
| >gnl|CDD|227322 COG4989, COG4989, Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 4e-30
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN 70
R+ L GLE S++ G L+ + +S + +S I+ A GIT FD AD YG Y
Sbjct: 3 RITLAPDGLEFSRIVLGYWRLN---DWNMSARELLSFIETALELGITTFDHADIYGGYQC 59
Query: 71 EILLGKALKELP--RENIQVATKFGFVELGFTSVIVK---GTPEYVRSCCEASLRRLDVE 125
E L G+ALK P RE I++ +K G + + E++ E SL L +
Sbjct: 60 EALFGEALKLAPGLREKIEIVSKCGIRLPSREEPRIGHYDTSKEHIIKSVEQSLINLKTD 119
Query: 126 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIR--RAHAVHPITAVQ 183
Y+DL HR D + EE L + GK+++ G+S +P ++ + Q
Sbjct: 120 YLDLLLIHRPDPLMDAEEVAEAFTHLHKSGKVRHFGVSNFNPAQFELLQSRLPFTLVTNQ 179
Query: 184 LEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRG 217
LE S + + + C++L + + + PLG G
Sbjct: 180 LELSPLHTPMLLDGTLDYCQQLRVRPMAWSPLGGG 214
|
Length = 298 |
| >gnl|CDD|178198 PLN02587, PLN02587, L-galactose dehydrogenase | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 6e-27
Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 13 KLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEI 72
+LG+ GL+VS +G+G L + P+SEED I+ ++ AF GI FFDT+ YG +E
Sbjct: 3 ELGSTGLKVSSVGFGASPLGSVF-GPVSEEDAIASVREAFRLGINFFDTSPYYGGTLSEK 61
Query: 73 LLGKALKEL--PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLY 130
+LGKALK L PRE V+TK G GF + E V + SL RL ++Y+D+
Sbjct: 62 VLGKALKALGIPREKYVVSTKCGRYGEGFDF-----SAERVTKSVDESLARLQLDYVDIL 116
Query: 131 YQHRVD-TSVP--IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
+ H ++ S+ + ETI ++KL E GK+++IG++ P V + S
Sbjct: 117 HCHDIEFGSLDQIVNETIPALQKLKESGKVRFIGITGLPLAIFTYVLDRVPPGTVDVILS 176
Query: 188 LWARDIEN----EIVPLCRELGIGIVPYCPLGRGFFGGK 222
+ + +++P + G+G++ PL G
Sbjct: 177 YCHYSLNDSSLEDLLPYLKSKGVGVISASPLAMGLLTEN 215
|
Length = 314 |
| >gnl|CDD|224370 COG1453, COG1453, Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 7e-26
Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 13 KLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEI 72
K G E+S LG+GCM L + EE+ I +A GI + DTA Y +E
Sbjct: 5 KFPKTGDELSILGFGCMRLPLKEQGSIDEENANETIDYAIEHGINYIDTAWPYHGGESEE 64
Query: 73 LLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQ 132
LGKALK+ RE +++ATK S VK E + L +L +YID Y
Sbjct: 65 FLGKALKDGYREKVKLATK-------LPSWPVK-DREDMERIFNEQLEKLGTDYIDYYLI 116
Query: 133 HRVDTSVPIEETIGEMK---------KLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAV 182
H ++T ET +++ K EGKI+ G S S + + +P V
Sbjct: 117 HGLNT-----ETWEKIERLGVFDFLEKAKAEGKIRNAGFSFHGSTEVFKEIVDAYPWDFV 171
Query: 183 QLEWSLWARDIENEIVP----LCRELGIGIVPYCPLGRG 217
QL+++ D +N+ G+GI PL G
Sbjct: 172 QLQYNYI--DQKNQAGTEGLKYAASKGLGIFIMEPLDGG 208
|
Length = 391 |
| >gnl|CDD|182140 PRK09912, PRK09912, L-glyceraldehyde 3-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Score = 97.0 bits (241), Expect = 1e-23
Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 16/229 (6%)
Query: 15 GTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY--TNEI 72
G GL + L G G + + L + +I++ AF GIT FD A+ YGP + E
Sbjct: 19 GKSGLRLPALSLGLWHNFG-HVNALESQR--AILRKAFDLGITHFDLANNYGPPPGSAEE 75
Query: 73 LLGKALKE---LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
G+ L+E R+ + ++TK G+ ++ G+ +Y+ + + SL+R+ +EY+D+
Sbjct: 76 NFGRLLREDFAAYRDELIISTKAGY-DMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDI 134
Query: 130 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPD-TIRRAHAVH----PITAVQL 184
+Y HRVD + P+EET + V+ GK Y+G+S SP+ T + + P+ Q
Sbjct: 135 FYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQP 194
Query: 185 EWSLWARDIENE-IVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDS 232
++L R ++ ++ + G+G + + PL +G GK + +P DS
Sbjct: 195 SYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGK-YLNGIPQDS 242
|
Length = 346 |
| >gnl|CDD|236676 PRK10376, PRK10376, putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 91.6 bits (228), Expect = 6e-22
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 14/210 (6%)
Query: 18 GLEVSKLGYGCMSLSG--CYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY-TNEILL 74
G V++LGYG M L+G + P + I++++ A + G+ DT+D YGP+ TN+ L+
Sbjct: 14 GRSVNRLGYGAMQLAGPGVFGPPKDRDAAIAVLREAVALGVNHIDTSDFYGPHVTNQ-LI 72
Query: 75 GKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHR 134
+AL P +++ + TK G S + +P +R +LR L ++ +D+ R
Sbjct: 73 REALHPYP-DDLTIVTKVGARRGEDGSWLPAFSPAELRRAVHDNLRNLGLDVLDVV-NLR 130
Query: 135 V--DTSVPIEETIGE-MKKLVE---EGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
+ D P E +I E + L E +G +++IGLS +P + A + I VQ ++L
Sbjct: 131 LMGDGHGPAEGSIEEPLTVLAELQRQGLVRHIGLSNVTPTQVAEARKIAEIVCVQNHYNL 190
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGF 218
R + I L R+ GI VP+ PLG GF
Sbjct: 191 AHRADDALIDALARD-GIAYVPFFPLG-GF 218
|
Length = 290 |
| >gnl|CDD|213602 TIGR01293, Kv_beta, voltage-dependent potassium channel beta subunit, animal | Back alignment and domain information |
|---|
Score = 88.1 bits (218), Expect = 2e-20
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 14 LGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEIL 73
LG GL VS LG G + +S+E ++ A+ GI FDTA+ Y E++
Sbjct: 4 LGKSGLRVSCLGLGTWVT---FGGQISDEMAEQLLTLAYENGINLFDTAEVYAAGKAEVV 60
Query: 74 LGKALKE--LPRENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLY 130
LG LK+ R + + TK + G + +G + +++ +ASL RL +EY+D+
Sbjct: 61 LGNILKKKGWRRSSYVITTK---IFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDIV 117
Query: 131 YQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQL 184
+ +R D + P+EET+ M ++ +G Y G S S I A++V P Q
Sbjct: 118 FANRPDPNTPMEETVRAMTYVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQA 177
Query: 185 EWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
E+ ++ R+ +E ++ L ++G+G + + PL G GK
Sbjct: 178 EYHMFQREKVEVQLPELYHKIGVGAMTWSPLACGLVSGK 216
|
This model describes the conserved core region of the beta subunit of voltage-gated potassium (Kv) channels in animals. Amino-terminal regions differ substantially, in part by alternative splicing, and are not included in the model. Four beta subunits form a complex with four alpha subunit cytoplasmic (T1) regions, and the structure of the complex is solved. The beta subunit belongs to a family of NAD(P)H-dependent aldo-keto reductases, binds NADPH, and couples voltage-gated channel activity to the redox potential of the cell. Plant beta subunits and their closely related bacterial homologs (in Deinococcus radiudurans, Xylella fastidiosa, etc.) appear more closely related to each other than to animal forms. However, the bacterial species lack convincing counterparts the Kv alpha subunit and the Kv beta homolog may serve as an enzyme. Cutoffs are set for this model such that yeast and plant forms and bacterial close homologs score between trusted and noise cutoffs. Length = 317 |
| >gnl|CDD|236727 PRK10625, tas, putative aldo-keto reductase; Provisional | Back alignment and domain information |
|---|
Score = 75.7 bits (186), Expect = 6e-16
Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 38/238 (15%)
Query: 19 LEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG----PYTN---E 71
LEVS LG G M+ G NS E D + + +A ++GI D A+ Y P T E
Sbjct: 11 LEVSTLGLGTMTF-GEQNS---EADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTE 66
Query: 72 ILLGKALKEL-PRENIQVATKFGFVELGFTSVIVKGTP---EYVRSCCEASLRRLDVEYI 127
+G L + RE + +A+K I + +R SL+RL +Y+
Sbjct: 67 TYIGNWLAKRGSREKLIIASKVSGPSRNNDKGIRPNQALDRKNIREALHDSLKRLQTDYL 126
Query: 128 DLY----------------YQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLSEASPDTI 170
DLY Y +V + ET+ + + GKI+YIG+S + +
Sbjct: 127 DLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLETLDALAEQQRAGKIRYIGVSNETAFGV 186
Query: 171 RR------AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
R H + I +Q +SL R E + + + G+ ++ Y L G GK
Sbjct: 187 MRYLHLAEKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLAFGTLTGK 244
|
Length = 346 |
| >gnl|CDD|183203 PRK11565, dkgA, 2,5-diketo-D-gluconate reductase A; Provisional | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 3e-10
Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 23/139 (16%)
Query: 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVEL 97
S E+ I+ I A G DTA Y NE +GKALKE + RE + + TK
Sbjct: 26 SNEEVITAIHKALEVGYRSIDTAAIYK---NEEGVGKALKEASVAREELFITTK------ 76
Query: 98 GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQH----RVDTSVPIEETIGEMKKLVE 153
+ + R E SL++L ++Y+DLY H +D V E M +L +
Sbjct: 77 -----LWNDDHKRPREALEESLKKLQLDYVDLYLMHWPVPAIDHYV---EAWKGMIELQK 128
Query: 154 EGKIKYIGLSEASPDTIRR 172
EG IK IG+ ++R
Sbjct: 129 EGLIKSIGVCNFQIHHLQR 147
|
Length = 275 |
| >gnl|CDD|183012 PRK11172, dkgB, 2,5-diketo-D-gluconate reductase B; Provisional | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 45 ISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVELGFTSV 102
I +K A G DTA Y NE +G+A+ E +PR+ + + TK L +
Sbjct: 19 IDSVKTALELGYRAIDTAQIYD---NEAAVGQAIAESGVPRDELFITTKIWIDNLAKDKL 75
Query: 103 IVKGTPEYVRSCCEASLRRLDVEYIDLYYQH--RVDTSVPIEETIGEMKKLVEEGKIKYI 160
I P + SL++L +Y+DL H + V +EE + + + ++G + I
Sbjct: 76 I----PSL-----KESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQGLTREI 126
Query: 161 GLSEASPDTIRRAHAV---HPITAVQLEWSLWARDIEN-EIVPLCRELGIGIVPYCPLGR 216
G+S + +++A A I Q+E S + ++N ++V +E GI + Y L
Sbjct: 127 GISNFTIALMKQAIAAVGAENIATNQIELSPY---LQNRKVVAFAKEHGIHVTSYMTLAY 183
Query: 217 G 217
G
Sbjct: 184 G 184
|
Length = 267 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 249 | |||
| COG0667 | 316 | Tas Predicted oxidoreductases (related to aryl-alc | 100.0 | |
| KOG1575 | 336 | consensus Voltage-gated shaker-like K+ channel, su | 100.0 | |
| PRK10625 | 346 | tas putative aldo-keto reductase; Provisional | 100.0 | |
| PRK09912 | 346 | L-glyceraldehyde 3-phosphate reductase; Provisiona | 100.0 | |
| COG0656 | 280 | ARA1 Aldo/keto reductases, related to diketogulona | 100.0 | |
| cd06660 | 285 | Aldo_ket_red Aldo-keto reductases (AKRs) are a sup | 100.0 | |
| TIGR01293 | 317 | Kv_beta voltage-dependent potassium channel beta s | 100.0 | |
| PLN02587 | 314 | L-galactose dehydrogenase | 100.0 | |
| PRK10376 | 290 | putative oxidoreductase; Provisional | 100.0 | |
| PF00248 | 283 | Aldo_ket_red: Aldo/keto reductase family; InterPro | 100.0 | |
| KOG1577 | 300 | consensus Aldo/keto reductase family proteins [Gen | 100.0 | |
| PRK11172 | 267 | dkgB 2,5-diketo-D-gluconate reductase B; Provision | 100.0 | |
| PRK14863 | 292 | bifunctional regulator KidO; Provisional | 100.0 | |
| COG4989 | 298 | Predicted oxidoreductase [General function predict | 100.0 | |
| KOG1576 | 342 | consensus Predicted oxidoreductase [Energy product | 100.0 | |
| COG1453 | 391 | Predicted oxidoreductases of the aldo/keto reducta | 100.0 | |
| PRK11565 | 275 | dkgA 2,5-diketo-D-gluconate reductase A; Provision | 100.0 | |
| KOG3023 | 285 | consensus Glutamate-cysteine ligase regulatory sub | 98.88 | |
| cd03319 | 316 | L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase cat | 95.6 | |
| cd03316 | 357 | MR_like Mandelate racemase (MR)-like subfamily of | 92.94 | |
| cd03315 | 265 | MLE_like Muconate lactonizing enzyme (MLE) like su | 91.36 | |
| COG0635 | 416 | HemN Coproporphyrinogen III oxidase and related Fe | 91.16 | |
| KOG0259 | 447 | consensus Tyrosine aminotransferase [Amino acid tr | 90.41 | |
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 90.24 | |
| cd03174 | 265 | DRE_TIM_metallolyase DRE-TIM metallolyase superfam | 90.12 | |
| COG0135 | 208 | TrpF Phosphoribosylanthranilate isomerase [Amino a | 89.93 | |
| PRK01222 | 210 | N-(5'-phosphoribosyl)anthranilate isomerase; Provi | 89.37 | |
| cd06543 | 294 | GH18_PF-ChiA-like PF-ChiA is an uncharacterized ch | 89.28 | |
| PRK13958 | 207 | N-(5'-phosphoribosyl)anthranilate isomerase; Provi | 88.87 | |
| PF00682 | 237 | HMGL-like: HMGL-like of this family is not conserv | 88.43 | |
| cd03323 | 395 | D-glucarate_dehydratase D-Glucarate dehydratase (G | 88.37 | |
| PRK13796 | 365 | GTPase YqeH; Provisional | 88.18 | |
| PRK08609 | 570 | hypothetical protein; Provisional | 85.63 | |
| COG2089 | 347 | SpsE Sialic acid synthase [Cell envelope biogenesi | 85.27 | |
| cd03318 | 365 | MLE Muconate Lactonizing Enzyme (MLE), an homoocta | 85.07 | |
| TIGR02370 | 197 | pyl_corrinoid methyltransferase cognate corrinoid | 84.64 | |
| PF03102 | 241 | NeuB: NeuB family; InterPro: IPR013132 NeuB is the | 83.72 | |
| cd03322 | 361 | rpsA The starvation sensing protein RpsA from E.co | 83.67 | |
| TIGR01928 | 324 | menC_lowGC/arch o-succinylbenzoic acid (OSB) synth | 83.5 | |
| cd04731 | 243 | HisF The cyclase subunit of imidazoleglycerol phos | 83.27 | |
| PRK10550 | 312 | tRNA-dihydrouridine synthase C; Provisional | 83.1 | |
| cd00308 | 229 | enolase_like Enolase-superfamily, characterized by | 82.07 | |
| cd02070 | 201 | corrinoid_protein_B12-BD B12 binding domain of cor | 82.06 | |
| PRK06294 | 370 | coproporphyrinogen III oxidase; Provisional | 82.05 | |
| PRK07379 | 400 | coproporphyrinogen III oxidase; Provisional | 81.86 | |
| PRK08392 | 215 | hypothetical protein; Provisional | 81.69 | |
| PRK00164 | 331 | moaA molybdenum cofactor biosynthesis protein A; R | 81.41 | |
| PRK08446 | 350 | coproporphyrinogen III oxidase; Provisional | 81.39 | |
| COG1140 | 513 | NarY Nitrate reductase beta subunit [Energy produc | 81.06 | |
| PRK07945 | 335 | hypothetical protein; Provisional | 80.32 | |
| PRK13803 | 610 | bifunctional phosphoribosylanthranilate isomerase/ | 80.17 | |
| PRK05692 | 287 | hydroxymethylglutaryl-CoA lyase; Provisional | 80.06 |
| >COG0667 Tas Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-54 Score=374.34 Aligned_cols=217 Identities=44% Similarity=0.719 Sum_probs=197.2
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCC-CCCeE
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIQ 87 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~-r~~~~ 87 (249)
|++|++|++|++||+||||||++|+. ....+++++.++|++|+++||||||||+.||.|.||++||++|+..+ |++++
T Consensus 1 m~~r~lG~~gl~vs~lglG~~~~g~~-~~~~~~~~a~~il~~A~d~Gin~~DTA~~Yg~g~sE~ilG~~l~~~~~Rd~vv 79 (316)
T COG0667 1 MKYRRLGRSGLKVSPLGLGTMTLGGD-TDDEEEAEAIEILDAALDAGINFFDTADVYGDGRSEEILGEALKERGRRDKVV 79 (316)
T ss_pred CCceecCCCCceecceeeeccccCCC-CCchhhhHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHhccCCCCeEE
Confidence 78999999999999999999999985 23335667888999999999999999999999999999999999744 89999
Q ss_pred EEecccccccCCccc-ccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 025707 88 VATKFGFVELGFTSV-IVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 166 (249)
Q Consensus 88 I~tK~~~~~~~~~~~-~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 166 (249)
|+||++.....+... ..+.++++|+++++.||+|||+||||+|++|++|...+.++++++|++|+++|+||+||+||++
T Consensus 80 IaTK~g~~~~~~~~~~~~~~s~~~i~~~v~~SL~RLgtd~IDl~~iH~~d~~~p~~e~~~aL~~l~~~G~ir~iG~S~~~ 159 (316)
T COG0667 80 IATKVGYRPGDPGPNGVFGLSRDHIRRAVEASLKRLGTDYIDLYQLHRPDPETPIEETLEALDELVREGKIRYIGVSNYS 159 (316)
T ss_pred EEEeeccCCCCCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeeEEEecCCC
Confidence 999998765321111 2567999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc-CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCC
Q 025707 167 PDTIRRAHAV-HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVE 226 (249)
Q Consensus 167 ~~~l~~~~~~-~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~ 226 (249)
.++++++++. .+++++|.+||+++|..+.+++++|+++||++++||||++|+|+||+...
T Consensus 160 ~~~i~~a~~~~~~~~~~Q~~ynl~~R~~e~~l~~~~~~~gi~~~~~spla~G~Ltgk~~~~ 220 (316)
T COG0667 160 AEQIAEALAVAAPIDSLQPEYNLLERDAEKELLPLCREEGIGLLAYSPLASGLLTGKYLPG 220 (316)
T ss_pred HHHHHHHHHhcCCceeecccCccccccchhHHHHHHHHcCCeEEEecCccccccCCCcCCC
Confidence 9999999999 69999999999999876677999999999999999999999999996653
|
|
| >KOG1575 consensus Voltage-gated shaker-like K+ channel, subunit beta/KCNAB [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-52 Score=356.17 Aligned_cols=233 Identities=45% Similarity=0.716 Sum_probs=208.0
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCC
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~ 84 (249)
..|+|+++|++|++||++|||||.+.. |+.+.+++++.+++++|+++|+|+||||++||.+.||..+|+++++ .+|+
T Consensus 10 ~~~~~~~lg~~gl~Vs~lglG~m~~~~-~~~~~~~e~a~~~m~~a~e~Gin~fDtAe~Yg~~~~E~llg~~i~~~~~~R~ 88 (336)
T KOG1575|consen 10 LGMLRRKLGNSGLKVSPLGLGCMGWTT-FGGQIDKEEAFELLDHAYEAGINFFDTAEVYGNGQSEELLGEFIKSRGWRRD 88 (336)
T ss_pred hcceeeeccCCCceecceeecceeeec-cccCCCHHHHHHHHHHHHHcCCCEEehhhhcCCcccHHHHHHHHHhcCCcCC
Confidence 368999999999999999999975544 5556899999999999999999999999999999999999999998 7899
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
+++|+||++.... .......+..++.+.++.|++||+++|||+|++||+|...++++++++|.+++++|+|++||+|+
T Consensus 89 ~vviaTK~~~~~~--~~~~~G~~~~~i~~~~~~s~~rl~~~~IDl~q~Hr~D~~~piee~m~aL~~lve~Gki~yiGlSe 166 (336)
T KOG1575|consen 89 KVVIATKFGFDYG--GETPRGLSRKHIIEGVRDSLRRLQTDYIDLLQVHRWDPMVPIEETMRALTDLVEQGKIRYWGLSE 166 (336)
T ss_pred cEEEEEEEeccCC--CcCCCCCcHHHHHHHHHHHHHhcCCCeeEEEEEcccCCCCCHHHHHHHHHHHHhcCceEEEEecc
Confidence 9999999987662 22245677899999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCC--ceEEeeecCccccchh-hhHHHHHHHhCCcEEecccCcccccCCCCC-CCCCCCCcccccCCCc
Q 025707 165 ASPDTIRRAHAVHP--ITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGKAV-VESVPLDSFLVCFSSI 240 (249)
Q Consensus 165 ~~~~~l~~~~~~~~--~~~~q~~~n~~~~~~~-~~~~~~~~~~gi~v~a~spl~~G~l~g~~~-~~~~~~~~~~~~~~~~ 240 (249)
++.+++.+++...+ +.++|++||++.|+.+ .++++.|++.||++++||||++|+||||+. .++.+..+.+..++.+
T Consensus 167 ~sa~~I~~a~~~~~~p~~s~Q~eysl~~Rd~ee~~i~~~c~~~Gi~li~ysPL~~G~Ltgk~~~~e~~~~~~~~~~~~~~ 246 (336)
T KOG1575|consen 167 WSAEEIREAHAVAPIPIVAVQVEYSLLSRDKEERGIIPLCRELGIGLIAWSPLGRGLLTGKYKLGEDSRNGDKRFQFLGL 246 (336)
T ss_pred CCHHHHHHHHHhcCCCceEeeeechhhhcchhhhhHHHHHHHcCcceEEecccccceeccCccccccccccccccccccc
Confidence 99999999999876 9999999999999855 669999999999999999999999999944 4666676665555444
Q ss_pred ce
Q 025707 241 SV 242 (249)
Q Consensus 241 ~~ 242 (249)
..
T Consensus 247 ~~ 248 (336)
T KOG1575|consen 247 SP 248 (336)
T ss_pred cc
Confidence 33
|
|
| >PRK10625 tas putative aldo-keto reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-49 Score=347.34 Aligned_cols=213 Identities=27% Similarity=0.382 Sum_probs=183.1
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcC-------CCchHHHHHHHHHc-
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG-------PYTNEILLGKALKE- 80 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg-------~g~se~~lg~~l~~- 80 (249)
|+||+||++|++||.||||||++|. ..+++++.++|+.|++.|||+||||+.|| .|.+|+.+|++|+.
T Consensus 1 m~~r~lg~t~~~vs~iglGt~~~g~----~~~~~~a~~~l~~al~~Gi~~~DTA~~Yg~~~~~~~~g~sE~~iG~aL~~~ 76 (346)
T PRK10625 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYIGNWLAKR 76 (346)
T ss_pred CCceecCCCCCccccEeEeccccCC----CCCHHHHHHHHHHHHHcCCCEEECccccCCCcCCCCCCchHHHHHHHHhhc
Confidence 7899999999999999999999764 34689999999999999999999999998 47899999999985
Q ss_pred CCCCCeEEEecccccccC-Ccc--cccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-----------------CCC
Q 025707 81 LPRENIQVATKFGFVELG-FTS--VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-----------------SVP 140 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~-~~~--~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-----------------~~~ 140 (249)
..|++++|+||++..... ... .....+++.+++++++||+|||+||||+|++|+|+. ..+
T Consensus 77 ~~R~~v~i~TK~~~~~~~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~ 156 (346)
T PRK10625 77 GSREKLIIASKVSGPSRNNDKGIRPNQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_pred CCcceEEEEcccccCCcCCCCCcCCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEeeccCcccccccccccccccccCCCC
Confidence 469999999998632110 000 012468999999999999999999999999999864 245
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc------CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccC
Q 025707 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV------HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~------~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl 214 (249)
++++|++|++|+++|+|++||+||++.++++++... ..+.++|++||++++..+.+++++|+++||++++|+||
T Consensus 157 ~~e~~~aL~~l~~~GkIr~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~q~~y~l~~r~~~~~ll~~~~~~gi~via~spL 236 (346)
T PRK10625 157 LLETLDALAEQQRAGKIRYIGVSNETAFGVMRYLHLAEKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCHHHHHHHHHHHHHcCCCCcEEecCCCCcccccchhHHHHHHHHcCCeEEEeccc
Confidence 789999999999999999999999999988776432 35788999999999876678999999999999999999
Q ss_pred cccccCCCCCC
Q 025707 215 GRGFFGGKAVV 225 (249)
Q Consensus 215 ~~G~l~g~~~~ 225 (249)
++|+|++++..
T Consensus 237 ~~G~Ltg~~~~ 247 (346)
T PRK10625 237 AFGTLTGKYLN 247 (346)
T ss_pred cCeeccCCCCC
Confidence 99999998543
|
|
| >PRK09912 L-glyceraldehyde 3-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-48 Score=344.85 Aligned_cols=216 Identities=29% Similarity=0.528 Sum_probs=187.0
Q ss_pred ccccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC--CchHHHHHHHHHc--
Q 025707 5 KKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP--YTNEILLGKALKE-- 80 (249)
Q Consensus 5 ~~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~--g~se~~lg~~l~~-- 80 (249)
-+..|++|+||++|++||+||||||+. +|...+.+++.++|+.|+++|||+||||+.||+ |.+|+.+|++|++
T Consensus 9 ~~~~m~~r~lg~tg~~vs~lglG~~~~---~g~~~~~~~~~~~l~~A~~~Gin~~DTA~~YG~~~g~sE~~lG~~l~~~~ 85 (346)
T PRK09912 9 RYGQMQYRYCGKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDF 85 (346)
T ss_pred CCCCcceeecCCCCcccccccccCccc---cCCCCCHHHHHHHHHHHHHCCCCEEEChhhhCCCCCCcHHHHHHHHHhcc
Confidence 346799999999999999999999962 333346788999999999999999999999994 8899999999985
Q ss_pred -CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeE
Q 025707 81 -LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY 159 (249)
Q Consensus 81 -~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~ 159 (249)
..|++++|+||++.....+ ......+++.+++++++||+|||+||||+|++|+|+...++++++++|++|+++|+||+
T Consensus 86 ~~~Rd~~~I~TK~g~~~~~~-~~~~~~s~~~i~~~~e~SL~rLg~d~iDl~~lH~~~~~~~~~e~~~al~~l~~~GkIr~ 164 (346)
T PRK09912 86 AAYRDELIISTKAGYDMWPG-PYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALY 164 (346)
T ss_pred cCCCCeEEEEEEecccCCCC-cCCCCCCHHHHHHHHHHHHHHHCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCeeE
Confidence 2699999999987531111 01124679999999999999999999999999999988889999999999999999999
Q ss_pred EEcCCCCHHHHHHHhhc-----CCceEEeeecCccccchh-hhHHHHHHHhCCcEEecccCcccccCCCCC
Q 025707 160 IGLSEASPDTIRRAHAV-----HPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (249)
Q Consensus 160 iGvs~~~~~~l~~~~~~-----~~~~~~q~~~n~~~~~~~-~~~~~~~~~~gi~v~a~spl~~G~l~g~~~ 224 (249)
||+|||++++++++.+. .++.++|++||++++..+ .+++++|+++||+|++|+||++|+|++++.
T Consensus 165 iGvSn~~~~~~~~~~~~~~~~~~~~~~~Q~~ynll~~~~~~~~ll~~~~~~gI~via~spl~~G~Lt~~~~ 235 (346)
T PRK09912 165 VGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL 235 (346)
T ss_pred EEecCCCHHHHHHHHHHHHhcCCCcEEeeccCCceecccchhhHHHHHHHcCceEEEehhhcCccccCCCC
Confidence 99999999988766542 367899999999998654 579999999999999999999999999853
|
|
| >COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-50 Score=336.68 Aligned_cols=216 Identities=29% Similarity=0.495 Sum_probs=188.5
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCe
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENI 86 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~ 86 (249)
+.+.++ ++|.+||.||||||++++ .+...+.+.+|++.|+|+||||..|| +|+.+|+++++ .+|+++
T Consensus 3 ~~~~~l-~~g~~iP~iGlGt~~~~~-------~~~~~~av~~Al~~Gyr~IDTA~~Yg---nE~~VG~aI~~s~v~Reel 71 (280)
T COG0656 3 KTKVTL-NNGVEIPAIGLGTWQIGD-------DEWAVRAVRAALELGYRLIDTAEIYG---NEEEVGEAIKESGVPREEL 71 (280)
T ss_pred Cceeec-CCCCcccCcceEeeecCC-------chhHHHHHHHHHHhCcceEecHhHhc---CHHHHHHHHHhcCCCHHHe
Confidence 445667 568889999999999765 23389999999999999999999999 99999999998 789999
Q ss_pred EEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC--CCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS--VPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~--~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
||+||+|... .+.+.+.+++++||++||+||+|||++|||... ..+.++|++|++++++|+||+|||||
T Consensus 72 FittKvw~~~---------~~~~~~~~a~e~Sl~rLg~dyvDLyLiHwP~~~~~~~~~etw~alE~l~~~G~ir~IGVSN 142 (280)
T COG0656 72 FITTKVWPSD---------LGYDETLKALEASLKRLGLDYVDLYLIHWPVPNKYVVIEETWKALEELVDEGLIRAIGVSN 142 (280)
T ss_pred EEEeecCCcc---------CCcchHHHHHHHHHHHhCCCceeEEEECCCCCccCccHHHHHHHHHHHHhcCCccEEEeeC
Confidence 9999999764 568899999999999999999999999999753 33789999999999999999999999
Q ss_pred CCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc-cCCCCCCCCCCCCcccccCCCcc
Q 025707 165 ASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF-FGGKAVVESVPLDSFLVCFSSIS 241 (249)
Q Consensus 165 ~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~-l~g~~~~~~~~~~~~~~~~~~~~ 241 (249)
|+.++++++++. ..+.++|++||++.+. .+++++|+++||.++|||||++|. +...+....+++ .+.++.+|+.
T Consensus 143 F~~~~L~~l~~~~~~~p~~NQIe~hp~~~q--~el~~~~~~~gI~v~AysPL~~g~~l~~~~~l~~Ia~-k~g~t~AQv~ 219 (280)
T COG0656 143 FGVEHLEELLSLAKVKPAVNQIEYHPYLRQ--PELLPFCQRHGIAVEAYSPLAKGGKLLDNPVLAEIAK-KYGKTPAQVA 219 (280)
T ss_pred CCHHHHHHHHHhcCCCCceEEEEeccCCCc--HHHHHHHHHcCCEEEEECCcccccccccChHHHHHHH-HhCCCHHHHH
Confidence 999999999887 4589999999999986 459999999999999999999654 555544455555 6766889999
Q ss_pred eeeeee
Q 025707 242 VSFCFI 247 (249)
Q Consensus 242 ~~~~~~ 247 (249)
+||+..
T Consensus 220 L~W~i~ 225 (280)
T COG0656 220 LRWHIQ 225 (280)
T ss_pred HHHHHh
Confidence 999864
|
|
| >cd06660 Aldo_ket_red Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-49 Score=338.28 Aligned_cols=231 Identities=40% Similarity=0.643 Sum_probs=202.2
Q ss_pred ceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCC-CCCeEEE
Q 025707 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIQVA 89 (249)
Q Consensus 11 ~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~-r~~~~I~ 89 (249)
+|+||++|++||+||||||+++..| .+.+++.++++.|++.|||+||||+.||+|.+|+.+|++|+..+ |++++|+
T Consensus 1 ~r~lg~tg~~vs~lg~G~~~~~~~~---~~~~~~~~~l~~A~~~Gi~~iDTA~~Yg~g~sE~~lG~al~~~~~R~~~~i~ 77 (285)
T cd06660 1 YRTLGKTGLKVSRLGLGTWQLGGGY---VDEEEAAAAVRAALDAGINFIDTADVYGDGESEELLGEALKERGPREEVFIA 77 (285)
T ss_pred CcccCCCCceecCcceeccccCCCC---CCHHHHHHHHHHHHHcCCCeEECccccCCCCCHHHHHHHHhccCCcCcEEEE
Confidence 5789999999999999999988755 47899999999999999999999999999999999999999755 9999999
Q ss_pred ecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCC-HHHHHHHHHHHHHcCCeeEEEcCCCCHH
Q 025707 90 TKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSEASPD 168 (249)
Q Consensus 90 tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~-~~~~~~~l~~l~~~G~ir~iGvs~~~~~ 168 (249)
||++..... .++.+++.+++++++||++||+||||+|++|+|+.... ..++|++|++++++|+||+||+||++++
T Consensus 78 tK~~~~~~~----~~~~~~~~~~~~l~~sL~~L~~~~iDl~~lh~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~ 153 (285)
T cd06660 78 TKVGPRPGD----GRDLSPEHIRRAVEESLKRLGTDYIDLYLLHWPDPDTPDIEETLRALEELVKEGKIRAIGVSNFSAE 153 (285)
T ss_pred eeecCCCCC----CCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCCHHHHHHHHHHHHHcCCccEEEeeCCCHH
Confidence 999865321 13468999999999999999999999999999988766 8999999999999999999999999999
Q ss_pred HHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCC-C-----------CCccc
Q 025707 169 TIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESV-P-----------LDSFL 234 (249)
Q Consensus 169 ~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~-~-----------~~~~~ 234 (249)
.++++... .+++++|++||++++....+++++|+++||+|++|+||++|.++++...... + .....
T Consensus 154 ~l~~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~~l~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd06660 154 QLEEALAAAGVPPAVNQVEYNLLDRQAEEELLPYCREHGIGVIAYSPLAGGLLTGKYLPGAPPPEGDLLEALKEIAEKHG 233 (285)
T ss_pred HHHHHHHhhCCCceEEecccCcccCchHHHHHHHHHHcCcEEEEeccccCceecCCCCCCCCCChhhHHHHHHHHHHHhC
Confidence 99999888 8999999999999997655799999999999999999999999988443211 1 11234
Q ss_pred ccCCCcceeeeeec
Q 025707 235 VCFSSISVSFCFIT 248 (249)
Q Consensus 235 ~~~~~~~~~~~~~~ 248 (249)
.+.++++++|++..
T Consensus 234 ~s~~q~al~~~l~~ 247 (285)
T cd06660 234 VTPAQVALRWLLQQ 247 (285)
T ss_pred CCHHHHHHHHHhcC
Confidence 56678889988764
|
AKRs are present in all phyla and are of importance to both health and industrial applications. Members have very distinct functions and include the prokaryotic 2,5-diketo-D-gluconic acid reductases and beta-keto ester reductases, the eukaryotic aldose reductases, aldehyde reductases, hydroxysteroid dehydrogenases, steroid 5beta-reductases, potassium channel beta-subunits and aflatoxin aldehyde reductases, among others. |
| >TIGR01293 Kv_beta voltage-dependent potassium channel beta subunit, animal | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-48 Score=338.85 Aligned_cols=210 Identities=30% Similarity=0.465 Sum_probs=183.9
Q ss_pred ceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCeEE
Q 025707 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQV 88 (249)
Q Consensus 11 ~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~~I 88 (249)
||+||++|++||+||||||++. +...+.+++.++|+.|+++|||+||||+.||.|.||+.+|++|+. .+|++++|
T Consensus 1 ~r~lg~tg~~vs~lglGt~~~~---g~~~~~~~a~~~l~~al~~Gi~~~DTA~~Yg~g~sE~~lG~~l~~~~~~R~~~~i 77 (317)
T TIGR01293 1 YRNLGKSGLRVSCLGLGTWVTF---GGQISDEMAEQLLTLAYENGINLFDTAEVYAAGKAEVVLGNILKKKGWRRSSYVI 77 (317)
T ss_pred CcccCCCCCeecceeecCCccC---CCCCCHHHHHHHHHHHHHcCCCeEECccccCCCccHHHHHHHHHhcCCCcccEEE
Confidence 5889999999999999999742 224578999999999999999999999999999999999999985 36999999
Q ss_pred EecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHH
Q 025707 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPD 168 (249)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~ 168 (249)
+||++..... ....+.+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++|+||+||+||++.+
T Consensus 78 aTK~~~~~~~--~~~~~~~~~~i~~~~~~SL~rL~td~iDl~~lH~~~~~~~~~e~~~aL~~l~~~G~ir~iGvSn~~~~ 155 (317)
T TIGR01293 78 TTKIFWGGKA--ETERGLSRKHIIEGLKASLERLQLEYVDIVFANRPDPNTPMEETVRAMTYVINQGMAMYWGTSRWSSM 155 (317)
T ss_pred EeeeccCCCC--CCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEeccCCCCCCHHHHHHHHHHHHHcCCeeEEEecCCCHH
Confidence 9998642110 01134679999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHhhc------CCceEEeeecCccccch-hhhHHHHHHHhCCcEEecccCcccccCCCCCC
Q 025707 169 TIRRAHAV------HPITAVQLEWSLWARDI-ENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (249)
Q Consensus 169 ~l~~~~~~------~~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~ 225 (249)
+++++... .+++++|++||++++.. +..++++|+++||++++|+||++|+|++++..
T Consensus 156 ~l~~~~~~~~~~~~~~~~~~Q~~~~l~~r~~~e~~l~~~~~~~gi~v~a~spl~~G~Ltg~~~~ 219 (317)
T TIGR01293 156 EIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELYHKIGVGAMTWSPLACGLVSGKYDS 219 (317)
T ss_pred HHHHHHHHHHHcCCCCcceeccccChHhcchhHHHHHHHHHHcCCeEEEeccccccccCCCCCC
Confidence 98776533 46789999999999864 56899999999999999999999999998643
|
Plant beta subunits and their closely related bacterial homologs (in Deinococcus radiudurans, Xylella fastidiosa, etc.) appear more closely related to each other than to animal forms. However, the bacterial species lack convincing counterparts the Kv alpha subunit and the Kv beta homolog may serve as an enzyme. Cutoffs are set for this model such that yeast and plant forms and bacterial close homologs score between trusted and noise cutoffs. |
| >PLN02587 L-galactose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-48 Score=337.45 Aligned_cols=230 Identities=30% Similarity=0.495 Sum_probs=190.0
Q ss_pred ceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCeEE
Q 025707 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQV 88 (249)
Q Consensus 11 ~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~~I 88 (249)
||+||++|++||.||||||++|+.|+. .+.+++.+++++|++.|||+||||+.||.|.+|+.+|++|+. .+|++++|
T Consensus 1 ~r~lg~t~~~vs~lglG~~~~g~~~~~-~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lG~al~~~~~~R~~v~I 79 (314)
T PLN02587 1 LRELGSTGLKVSSVGFGASPLGSVFGP-VSEEDAIASVREAFRLGINFFDTSPYYGGTLSEKVLGKALKALGIPREKYVV 79 (314)
T ss_pred CCcCCCCCCcccCcccccccccCCCCC-CCHHHHHHHHHHHHHcCCCEEECcCccCCCchHHHHHHHHHhCCCCcceEEE
Confidence 689999999999999999999876654 478999999999999999999999999999999999999987 46999999
Q ss_pred EecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC---CCHHHHHHHHHHHHHcCCeeEEEcCCC
Q 025707 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS---VPIEETIGEMKKLVEEGKIKYIGLSEA 165 (249)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~---~~~~~~~~~l~~l~~~G~ir~iGvs~~ 165 (249)
+||++.... ..+.+++.+++++++||++||+||||+|++|+|+.. ..++++|++|++|+++|+||+||+|||
T Consensus 80 ~TK~~~~~~-----~~~~~~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvSn~ 154 (314)
T PLN02587 80 STKCGRYGE-----GFDFSAERVTKSVDESLARLQLDYVDILHCHDIEFGSLDQIVNETIPALQKLKESGKVRFIGITGL 154 (314)
T ss_pred EeccccCCC-----CCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCcchhhhHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 999974321 124679999999999999999999999999999642 346789999999999999999999999
Q ss_pred CHHHHHHHhhc---C--CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCC----------
Q 025707 166 SPDTIRRAHAV---H--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPL---------- 230 (249)
Q Consensus 166 ~~~~l~~~~~~---~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~---------- 230 (249)
++++++.+... . .+..+|+.||+.++.. .+++++|+++||++++|+||++|+|+++......+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~ll~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~ 233 (314)
T PLN02587 155 PLAIFTYVLDRVPPGTVDVILSYCHYSLNDSSL-EDLLPYLKSKGVGVISASPLAMGLLTENGPPEWHPAPPELKSACAA 233 (314)
T ss_pred CHHHHHHHHHhhhcCCCCeEEeccccCcchhhH-HHHHHHHHHcCceEEEechhhccccCCCCCCCCCCCCHHHHHHHHH
Confidence 99888776543 2 2334578888877643 689999999999999999999999998742111010
Q ss_pred -----CcccccCCCcceeeeee
Q 025707 231 -----DSFLVCFSSISVSFCFI 247 (249)
Q Consensus 231 -----~~~~~~~~~~~~~~~~~ 247 (249)
..+..+.++++++|++.
T Consensus 234 l~~~a~~~~~s~aq~al~~~l~ 255 (314)
T PLN02587 234 AATHCKEKGKNISKLALQYSLS 255 (314)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh
Confidence 02234556788888764
|
|
| >PRK10376 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-46 Score=321.97 Aligned_cols=228 Identities=25% Similarity=0.422 Sum_probs=186.7
Q ss_pred CCcccCcceeecccccC--CCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccc
Q 025707 17 QGLEVSKLGYGCMSLSG--CYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGF 94 (249)
Q Consensus 17 ~g~~vs~lg~Gt~~~~~--~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~ 94 (249)
+|++||+||||||++|+ .|+...+++++.++++.|++.|||+||||+.||++.+|+.+|++++. .|++++|+||++.
T Consensus 13 ~g~~vs~iglG~~~lg~~~~~g~~~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~~~sE~~lg~~l~~-~R~~~~i~TK~g~ 91 (290)
T PRK10376 13 GGRSVNRLGYGAMQLAGPGVFGPPKDRDAAIAVLREAVALGVNHIDTSDFYGPHVTNQLIREALHP-YPDDLTIVTKVGA 91 (290)
T ss_pred CCeeecccceeccccCCCCcCCCCCCHHHHHHHHHHHHHcCCCeEEChhhcCCCcHHHHHHHHHhc-CCCeEEEEeeecc
Confidence 39999999999999986 46666678999999999999999999999999999999999999973 5999999999875
Q ss_pred cccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-----CCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHH
Q 025707 95 VELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-----SVPIEETIGEMKKLVEEGKIKYIGLSEASPDT 169 (249)
Q Consensus 95 ~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-----~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~ 169 (249)
............+++.+++++++||+|||+||||+|++|+++. ..+++++|++|++|+++|+||+||+|||++++
T Consensus 92 ~~~~~~~~~~~~~~~~i~~~~e~SL~rL~td~iDl~~~H~~~~~h~p~~~~~~~~~~~l~~l~~~Gkir~iGvSn~~~~~ 171 (290)
T PRK10376 92 RRGEDGSWLPAFSPAELRRAVHDNLRNLGLDVLDVVNLRLMGDGHGPAEGSIEEPLTVLAELQRQGLVRHIGLSNVTPTQ 171 (290)
T ss_pred cCCCCCccCCCCCHHHHHHHHHHHHHHhCCCeEEEEEEeccCCCCCCCCCCHHHHHHHHHHHHHCCceeEEEecCCCHHH
Confidence 3211111123567999999999999999999999999987421 24578999999999999999999999999999
Q ss_pred HHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCcceeeeee
Q 025707 170 IRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSISVSFCFI 247 (249)
Q Consensus 170 l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (249)
++++....+++++|++||++++. ..+++++|+++||++++|+||+++..........+++ .+..+.++++++|++.
T Consensus 172 l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~gi~v~a~~pL~g~~~~~~~~l~~ia~-~~~~t~aq~al~w~l~ 247 (290)
T PRK10376 172 VAEARKIAEIVCVQNHYNLAHRA-DDALIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAA-SLGATPMQVALAWLLQ 247 (290)
T ss_pred HHHHHhhCCeEEEecccCCCcCC-hHHHHHHHHHcCCEEEEeecCCCCChhhhHHHHHHHH-HhCCCHHHHHHHHHHh
Confidence 99998888999999999999876 3679999999999999999998542111111112222 3344667888888875
|
|
| >PF00248 Aldo_ket_red: Aldo/keto reductase family; InterPro: IPR023210 The aldo-keto reductase family includes a number of related monomeric NADPH-dependent oxidoreductases, such as aldehyde reductase, aldose reductase, prostaglandin F synthase, xylose reductase, rho crystallin, and many others [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-46 Score=319.66 Aligned_cols=196 Identities=38% Similarity=0.624 Sum_probs=171.5
Q ss_pred cceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCeEEEecccccccCCc
Q 025707 23 KLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVELGFT 100 (249)
Q Consensus 23 ~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~~I~tK~~~~~~~~~ 100 (249)
+||||||++++. ..+.+++.++++.|++.|||+||||+.||+|.+|+.+|++|+. .+|++++|+||+... .
T Consensus 1 ~l~lG~~~~~~~---~~~~~~~~~~l~~a~~~Gin~~DtA~~Y~~g~sE~~lg~~l~~~~~~r~~~~i~tK~~~~----~ 73 (283)
T PF00248_consen 1 PLGLGTWRLGGE---RVSEEEAEAILRRALEAGINFFDTADSYGNGRSERILGRALRKSRVPRDDIFISTKVYGD----G 73 (283)
T ss_dssp SBEEECTTBTTT---TSTHHHHHHHHHHHHHTT--EEEECGGGGGGTHHHHHHHHHHHTSSTGGGSEEEEEEESS----S
T ss_pred CEEEEccccCCC---CCCHHHHHHHHHHHHHcCCCeecccccccccccccccccccccccccccccccccccccc----c
Confidence 589999998763 5689999999999999999999999999888999999999998 789999999999211 1
Q ss_pred ccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCC-HHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHH--hhcC
Q 025707 101 SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA--HAVH 177 (249)
Q Consensus 101 ~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~-~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~--~~~~ 177 (249)
......+++.+++++++||++||+||||+|++|+|+.... ..++|++|++|+++|+||+||+|||+++.++++ ....
T Consensus 74 ~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~ 153 (283)
T PF00248_consen 74 KPEPDYSPDSIRESLERSLERLGTDYIDLLLLHWPDPSEDALEEVWEALEELKKEGKIRHIGVSNFSPEQLEAALKIGSI 153 (283)
T ss_dssp STGGGSSHHHHHHHHHHHHHHHTSSSEEEEEESSSSTTSSHHHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHTCTSS
T ss_pred cccccccccccccccccccccccccchhccccccccccccccchhhhhhhhccccccccccccccccccccccccccccc
Confidence 2234678999999999999999999999999999999988 999999999999999999999999999999999 4557
Q ss_pred CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCC
Q 025707 178 PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (249)
Q Consensus 178 ~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~ 225 (249)
+++++|++||++++....+++++|+++||++++++||++|+|+++...
T Consensus 154 ~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~~~l~~G~l~~~~~~ 201 (283)
T PF00248_consen 154 PPDVVQINYNLLNRREEEGLLEFCREHGIGVIAYSPLAGGLLTGKYKS 201 (283)
T ss_dssp -ESEEEEE-BTTBHBGGHHHHHHHHHTT-EEEEESTTGGGCGGTTTTT
T ss_pred cccccccccccccccccccccccccccccccccccccccCcccccccc
Confidence 899999999999766679999999999999999999999999998543
|
All possess a similar structure, with a beta-alpha-beta fold characteristic of nucleotide binding proteins []. The fold comprises a parallel beta-8/alpha-8-barrel, which contains a novel NADP-binding motif. The binding site is located in a large, deep, elliptical pocket in the C-terminal end of the beta sheet, the substrate being bound in an extended conformation. The hydrophobic nature of the pocket favours aromatic and apolar substrates over highly polar ones []. Binding of the NADPH coenzyme causes a massive conformational change, reorienting a loop, effectively locking the coenzyme in place. This binding is more similar to FAD- than to NAD(P)-binding oxidoreductases []. Some proteins of this entry contain a K+ ion channel beta chain regulatory domain; these are reported to have oxidoreductase activity []. This entry represents the NADP-dependent oxidoreductase domain found in these proteins.; PDB: 1C9W_A 4F40_B 1VBJ_A 1XGD_A 1X97_A 2ACS_A 1EF3_A 2ACU_A 1PWM_A 2NVD_A .... |
| >KOG1577 consensus Aldo/keto reductase family proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-46 Score=314.74 Aligned_cols=212 Identities=28% Similarity=0.438 Sum_probs=186.2
Q ss_pred ceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CCCC
Q 025707 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPRE 84 (249)
Q Consensus 11 ~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~r~ 84 (249)
..+| ++|.+||.||||||+ .+..+...+++.|++.||||||||..|+ +|+.+|++|++ .+|+
T Consensus 6 ~~~L-n~G~~mP~iGlGTw~--------~~~~~~~~aV~~Al~~GYRHIDtA~~Y~---NE~evG~aik~~i~~~~v~Re 73 (300)
T KOG1577|consen 6 TVKL-NNGFKMPIIGLGTWQ--------SPPGQVAEAVKAAIKAGYRHIDTAHVYG---NEKEVGEAIKELLAEGGVKRE 73 (300)
T ss_pred eEec-cCCCccceeeeEecc--------cChhhHHHHHHHHHHhCcceeechhhhC---ChHHHHHHHHHHhhhCCcchh
Confidence 6778 889999999999997 2578899999999999999999999998 99999999996 6899
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC----------------CCHHHHHHHH
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS----------------VPIEETIGEM 148 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~----------------~~~~~~~~~l 148 (249)
++||+||+|... +.++.++.++++||++||+||+|+|++|||-.. .+..++|++|
T Consensus 74 diFiTSKlw~~~---------~~~~~v~~al~~sLk~L~ldYvDLyLiH~P~~~k~~~~~~~~~~~~~~~~~~~~tW~am 144 (300)
T KOG1577|consen 74 DIFITSKLWPTD---------HAPELVEKALEKSLKKLQLDYVDLYLIHWPVAFKDSFPKDENGKVNYDDVDRIETWKAM 144 (300)
T ss_pred hheeeeccCccc---------cChhhHHHHHHHHHHHhChhhhheeeEecccccCCCCCcccccccccccchHHHHHHHH
Confidence 999999999754 568999999999999999999999999999653 3467899999
Q ss_pred HHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccccc----CCC
Q 025707 149 KKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF----GGK 222 (249)
Q Consensus 149 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l----~g~ 222 (249)
++++++|++|+||||||+..+++++++. .++.++|++|+++.+. .++++||+++||.|.|||||+.+-- ...
T Consensus 145 E~~~~~Gl~rsIGVSNF~~~~le~ll~~~ki~P~vnQvE~HP~~~Q--~~L~~fCk~~~I~v~AYSpLg~~~~~~~ll~~ 222 (300)
T KOG1577|consen 145 EKLVDEGLVRSIGVSNFNIKQLEELLNLAKIKPAVNQVECHPYLQQ--KKLVEFCKSKGIVVTAYSPLGSPGRGSDLLED 222 (300)
T ss_pred HHHHHcCCceEeeeecCCHHHHHHHHhcCCCCCccceeeccCCcCh--HHHHHHHhhCCcEEEEecCCCCCCCccccccC
Confidence 9999999999999999999999999887 6789999999998774 7799999999999999999998654 122
Q ss_pred CCCCCCCCCcccccCCCcceeeee
Q 025707 223 AVVESVPLDSFLVCFSSISVSFCF 246 (249)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~ 246 (249)
+....+++ ++..+.+++.+||+.
T Consensus 223 ~~l~~iA~-K~~kt~aQIlLrw~~ 245 (300)
T KOG1577|consen 223 PVLKEIAK-KYNKTPAQILLRWAL 245 (300)
T ss_pred HHHHHHHH-HhCCCHHHHHHHHHH
Confidence 22233444 678888899999975
|
|
| >PRK11172 dkgB 2,5-diketo-D-gluconate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-45 Score=311.59 Aligned_cols=206 Identities=23% Similarity=0.390 Sum_probs=175.2
Q ss_pred cccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCeEEEecccccc
Q 025707 19 LEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVE 96 (249)
Q Consensus 19 ~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~~I~tK~~~~~ 96 (249)
++||.||||||+++ .+++.++++.|++.|||+||||+.|| +|+.+|++|+. .+|++++|+||++..
T Consensus 1 ~~vs~lglGt~~~~--------~~~~~~~i~~A~~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~v~i~TK~~~~- 68 (267)
T PRK11172 1 MSIPAFGLGTFRLK--------DQVVIDSVKTALELGYRAIDTAQIYD---NEAAVGQAIAESGVPRDELFITTKIWID- 68 (267)
T ss_pred CCCCCEeeEccccC--------hHHHHHHHHHHHHcCCCEEEccchhC---CHHHHHHHHHHcCCChhHeEEEEEeCCC-
Confidence 36899999999753 46799999999999999999999999 79999999985 479999999998532
Q ss_pred cCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC--CCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHh
Q 025707 97 LGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS--VPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH 174 (249)
Q Consensus 97 ~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~--~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~ 174 (249)
..+++.+++++++||+|||+||||+|++|+|+.. .+.+++|++|++|+++|+||+||+|||+.++++++.
T Consensus 69 --------~~~~~~~~~~~~~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~ 140 (267)
T PRK11172 69 --------NLAKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQGLTREIGISNFTIALMKQAI 140 (267)
T ss_pred --------CCCHHHHHHHHHHHHHHhCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEccCCHHHHHHHH
Confidence 2568999999999999999999999999999663 567899999999999999999999999999999887
Q ss_pred hc---CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCcceeeeee
Q 025707 175 AV---HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSISVSFCFI 247 (249)
Q Consensus 175 ~~---~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (249)
+. .+++++|++||++++. .+++++|+++||+|++|+||++|.+........+++ .+..+.++++++|++.
T Consensus 141 ~~~~~~~~~~~Q~~~~~~~~~--~~ll~~~~~~gi~v~a~spl~~G~~~~~~~l~~~a~-~~~~s~aqval~w~l~ 213 (267)
T PRK11172 141 AAVGAENIATNQIELSPYLQN--RKVVAFAKEHGIHVTSYMTLAYGKVLKDPVIARIAA-KHNATPAQVILAWAMQ 213 (267)
T ss_pred HhcCCCCCeEEeeecCCCCCc--HHHHHHHHHCCCEEEEECCCCCCcccCCHHHHHHHH-HhCCCHHHHHHHHHHh
Confidence 65 3689999999999874 689999999999999999999997754422222222 3445666888888763
|
|
| >PRK14863 bifunctional regulator KidO; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=312.19 Aligned_cols=191 Identities=20% Similarity=0.233 Sum_probs=168.2
Q ss_pred CcccCcceeecccccCC-------CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEe
Q 025707 18 GLEVSKLGYGCMSLSGC-------YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVAT 90 (249)
Q Consensus 18 g~~vs~lg~Gt~~~~~~-------~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~t 90 (249)
+++||+||||||++|+. |+ .++++++.++|+.|++.|||+||||+.|| .||+.+|++|+...+++++|+|
T Consensus 2 ~~~vs~iglGt~~~g~~~~~~~~~~~-~~~~~ea~~~l~~A~~~Gin~~DTA~~YG--~SE~~lG~al~~~~~~~~~i~t 78 (292)
T PRK14863 2 SSPVSKLGLAAAQFGLDPGSSSAPRG-RTPEAEARDILNIAARAGLSVLDASGLFG--RAETVLGQLIPRPVPFRVTLST 78 (292)
T ss_pred CCcceeeeeeeeccCCCcccccCCCC-CCCHHHHHHHHHHHHHcCCCEEecchhhh--hHHHHHhhhhccCCceEeeccc
Confidence 57899999999999864 34 35899999999999999999999999998 7999999999742346788888
Q ss_pred cccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-CCH-HHHHHHHHHHHHcCCeeEEEcCCCCHH
Q 025707 91 KFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPI-EETIGEMKKLVEEGKIKYIGLSEASPD 168 (249)
Q Consensus 91 K~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-~~~-~~~~~~l~~l~~~G~ir~iGvs~~~~~ 168 (249)
|.. +.+++.+++++++||+|||+||||+|++|+|+.. .+. +++|++|++|+++|+||+||+||++++
T Consensus 79 k~~-----------~~~~~~i~~~~e~SL~rLg~d~iDl~~lH~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvSn~~~~ 147 (292)
T PRK14863 79 VRA-----------DRGPDFVEAEARASLRRMGVERADAILVHSPTELFGPHGAALWERLQALKDQGLFAKIGVSAHASD 147 (292)
T ss_pred ccc-----------cccHHHHHHHHHHHHHHhCCCccCeEEEeCchhhcCcchHHHHHHHHHHHHcCCcceEeeeccCHH
Confidence 842 2358999999999999999999999999999763 233 578999999999999999999999999
Q ss_pred HHHHHhhcCCceEEeeecCccccchh-hhHHHHHHHhCCcEEecccCcccccCCC
Q 025707 169 TIRRAHAVHPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (249)
Q Consensus 169 ~l~~~~~~~~~~~~q~~~n~~~~~~~-~~~~~~~~~~gi~v~a~spl~~G~l~g~ 222 (249)
++..+....+++++|++||++++..+ .+++++|+++||++++|+||++|+|+++
T Consensus 148 ~~~~~~~~~~~~~~Q~~~n~l~~~~~~~~~l~~~~~~gi~v~a~spl~~G~L~~~ 202 (292)
T PRK14863 148 DPVGVARRFKPDILQAPASLLDQRLLADGSLQRIAGMGVEVHLRSIFLNGLLFLP 202 (292)
T ss_pred HHHHHHhcCCCCEEEecCCcccccccccchHHHHHhCCCEEEEechhhCccccCC
Confidence 98888777889999999999998653 5699999999999999999999999865
|
|
| >COG4989 Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-44 Score=291.61 Aligned_cols=237 Identities=27% Similarity=0.398 Sum_probs=200.9
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCe
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENI 86 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~ 86 (249)
|+++.+++.|+++|++.+|+|++.. |+. +..+....++.|++.||++||-|..||.|..|+.+|.+|+- ..|+++
T Consensus 1 m~rI~l~~~~~e~Sriv~G~wRl~d-~~~--~~~e~~~~Ie~~le~Gitt~DhADIYGgy~cE~~fg~aL~l~p~lReki 77 (298)
T COG4989 1 MQRITLAPDGLEFSRIVLGYWRLND-WNM--SARELLSFIETALELGITTFDHADIYGGYQCEALFGEALKLAPGLREKI 77 (298)
T ss_pred CceEEecCCCccHHHHHHHHHhhhh-ccC--CHHHHHHHHHHHHHcCcccchhhhhcCCccHHHHHHHHHhcChhhhhhe
Confidence 6789999999999999999999987 653 56899999999999999999999999999999999999987 469999
Q ss_pred EEEecccccccCC---cccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 025707 87 QVATKFGFVELGF---TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (249)
Q Consensus 87 ~I~tK~~~~~~~~---~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 163 (249)
.|.||++...... .....+.|.++|..++++||.+|++||+|++++|+||+..+.+++.+++..|+++||||++|||
T Consensus 78 eivsKCGI~~~s~~~~~~~hydts~~HI~~SVe~SL~~L~tDylD~LLiHRPDpLmd~eeVAeAf~~L~~sGKVr~fGVS 157 (298)
T COG4989 78 EIVSKCGIRLPSREEPRIGHYDTSKEHIIKSVEQSLINLKTDYLDLLLIHRPDPLMDAEEVAEAFTHLHKSGKVRHFGVS 157 (298)
T ss_pred EeeeccccccccccccccccccCcHHHHHHHHHHHHHHhccchhhhhhccCCcccCCHHHHHHHHHHHHhcCCeeeeecC
Confidence 9999999765432 1235678999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecCccccchh-hhHHHHHHHhCCcEEecccCcccccCCCCC--------CCCCCCCc
Q 025707 164 EASPDTIRRAHAV--HPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGKAV--------VESVPLDS 232 (249)
Q Consensus 164 ~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~-~~~~~~~~~~gi~v~a~spl~~G~l~g~~~--------~~~~~~~~ 232 (249)
|+++.+++.+... .++.++|++.|+++.... ++.+++|+++.|.+++||||++|-+....+ .+.+++..
T Consensus 158 Nf~p~Q~~LL~s~l~~~LvtNQlelS~~~~~~~~DGtLd~~q~~~v~pmaWSpl~gG~~F~g~~~~q~l~~~l~~ia~e~ 237 (298)
T COG4989 158 NFNPAQFELLQSRLPFTLVTNQLELSPLHTPMLLDGTLDYCQQLRVRPMAWSPLGGGGLFLGDDKFQRLRKVLDRIAEEY 237 (298)
T ss_pred CCCHHHHHHHHHhccchhhhcceeeccccccccccchHHHHHHcCCCcccccccCCCccccCCcchHHHHHHHHHHHHHh
Confidence 9999999887766 568899999999987543 889999999999999999999886554321 11222322
Q ss_pred ccccCCCcceeeeeec
Q 025707 233 FLVCFSSISVSFCFIT 248 (249)
Q Consensus 233 ~~~~~~~~~~~~~~~~ 248 (249)
...+...+.+.|.+||
T Consensus 238 ga~s~~~VaiAWllR~ 253 (298)
T COG4989 238 GAVSITAVAIAWLLRH 253 (298)
T ss_pred CcccHHHHHHHHHHhC
Confidence 2245555666666554
|
|
| >KOG1576 consensus Predicted oxidoreductase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-42 Score=280.94 Aligned_cols=224 Identities=29% Similarity=0.496 Sum_probs=194.6
Q ss_pred cccccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCC
Q 025707 4 DKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPR 83 (249)
Q Consensus 4 ~~~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r 83 (249)
+++..|+||.+|++|+.||+++||+..+++.++.. ++++....+..|+..|||+|||+|.||.+++|+.+|.++++.||
T Consensus 17 ~~vrrmeyR~lg~tgl~VSk~~fGga~L~~~fgd~-~~e~~i~tv~eA~k~GINyiDTsp~Ygqs~se~~lg~al~~vPR 95 (342)
T KOG1576|consen 17 EKVRRMEYRQLGSTGLRVSKLGFGGAALGQLFGDE-DEEEGILTVIEAFKSGINYIDTSPYYGQSRSEEGLGLALKDVPR 95 (342)
T ss_pred HHHHHHHHhhcCCCcceeeeeeecchhhhhhcCCc-chhhhHHHHHHHHHccccceecCcccCcchhHHHHHHHHhhCCh
Confidence 57788999999999999999999999999988874 78888888888999999999999999999999999999999999
Q ss_pred CCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC----CCHHHHHHHHHHHHHcCCeeE
Q 025707 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS----VPIEETIGEMKKLVEEGKIKY 159 (249)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~----~~~~~~~~~l~~l~~~G~ir~ 159 (249)
+.++|+||++....+.+ ...+++++.+++++++||+||++||+|++++|..+-. ..+.|++.+|+++|++||||+
T Consensus 96 ~aYyIaTKvgRy~ld~~-~~FdfsadkvreSv~rSlerLqldyvDilqiHDvefap~ld~vl~Etlp~Le~lk~~Gk~Rf 174 (342)
T KOG1576|consen 96 EAYYIATKVGRYELDYA-NMFDFSADKVRESVKRSLERLQLDYVDILQIHDVEFAPNLDIVLNETLPALEELKQEGKIRF 174 (342)
T ss_pred hheeeeeeeeecccCcc-ccccchHHHHHHHHHHHHHHhCCceeEEEEeecccccccccHHHHHHHHHHHHHHhcCceeE
Confidence 99999999997664422 2357899999999999999999999999999987654 346799999999999999999
Q ss_pred EEcCCCCHHHHHHHhhcC--CceEEe--eecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCC
Q 025707 160 IGLSEASPDTIRRAHAVH--PITAVQ--LEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPL 230 (249)
Q Consensus 160 iGvs~~~~~~l~~~~~~~--~~~~~q--~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~ 230 (249)
||++.++.+.+.++++.. .++++- ..|++.+.. .-..+++.+.+|++|+..++++.|+|+..-+++..|.
T Consensus 175 iGitgypldvl~~~ae~~~G~~dvvlsY~ry~l~d~t-Ll~~~~~~~sk~vgVi~AsalsmgLLt~~gp~~wHPa 248 (342)
T KOG1576|consen 175 IGITGYPLDVLTECAERGKGRLDVVLSYCRYTLNDNT-LLRYLKRLKSKGVGVINASALSMGLLTNQGPPPWHPA 248 (342)
T ss_pred eeecccchHHHHHHHhcCCCceeeehhhhhhccccHH-HHHHHHHHHhcCceEEehhhHHHHHhhcCCCCCCCCC
Confidence 999999999999998773 466665 456665543 2667888889999999999999999999965555554
|
|
| >COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=295.12 Aligned_cols=230 Identities=26% Similarity=0.323 Sum_probs=198.7
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEE
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQV 88 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I 88 (249)
|.||++|++|.++|.||||||++...|....+++.+.++|++|++.|||+||||..|..|.||..+|++|+...|+++.+
T Consensus 1 Mlyr~~~k~g~~~s~lgfG~MRlp~~~~~~id~~~~~~~i~~aie~GiNyidTA~~Yh~g~sE~~lgkaL~~~~Rekv~L 80 (391)
T COG1453 1 MLYRKFPKTGDELSILGFGCMRLPLKEQGSIDEENANETIDYAIEHGINYIDTAWPYHGGESEEFLGKALKDGYREKVKL 80 (391)
T ss_pred CchhhcCCCCcccceeccceeecccccCCCccHHHHHHHHHHHHHcCCceEeecccccCCCchHHHHHHhhhcccceEEE
Confidence 78999999999999999999999998888889999999999999999999999999966799999999999988999999
Q ss_pred EecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHH-----HHHHHHHHHHHcCCeeEEEcC
Q 025707 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIE-----ETIGEMKKLVEEGKIKYIGLS 163 (249)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~-----~~~~~l~~l~~~G~ir~iGvs 163 (249)
+||+.... --+++.+++-++++|++|++||+|+|++|+.+. ..++ ..++.+++++++|+||++|+|
T Consensus 81 aTKlp~~~--------~~~~edm~r~fneqLekl~~Dy~D~yliH~l~~-e~~~k~~~~g~~df~~kak~eGkIr~~GFS 151 (391)
T COG1453 81 ATKLPSWP--------VKDREDMERIFNEQLEKLGTDYIDYYLIHGLNT-ETWEKIERLGVFDFLEKAKAEGKIRNAGFS 151 (391)
T ss_pred EeecCCcc--------ccCHHHHHHHHHHHHHHhCCchhhhhhhccccH-HHHHHHHccChHHHHHHHHhcCcEEEeeec
Confidence 99997433 236889999999999999999999999999987 3332 369999999999999999999
Q ss_pred CCCH-HHHHHHhhcCCceEEeeecCccccchh--hhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccc-----
Q 025707 164 EASP-DTIRRAHAVHPITAVQLEWSLWARDIE--NEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV----- 235 (249)
Q Consensus 164 ~~~~-~~l~~~~~~~~~~~~q~~~n~~~~~~~--~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~----- 235 (249)
.|+. +.+.+++...+++++|++||.++.+.. .+.+++|.++|++|+.++|+.+|-|..+.+.. ..+-++.
T Consensus 152 fHgs~e~~~~iv~a~~~dfvqlq~ny~d~~n~~~~~~l~~A~~~~~gI~IMeP~~gG~l~~~vP~~--~~~l~~~~~~~~ 229 (391)
T COG1453 152 FHGSTEVFKEIVDAYPWDFVQLQYNYIDQKNQAGTEGLKYAASKGLGIFIMEPLDGGGLLYNVPEK--LEELCRPASPKR 229 (391)
T ss_pred CCCCHHHHHHHHhcCCcceEEeeeeeeccchhcccHHHHHHHhCCCcEEEEeeCCCCCcccCCCHH--HHHHHHhcCCCC
Confidence 9976 677888888899999999999997643 38999999999999999999999988863321 1112222
Q ss_pred cCCCcceeeeeecC
Q 025707 236 CFSSISVSFCFITQ 249 (249)
Q Consensus 236 ~~~~~~~~~~~~~~ 249 (249)
+.++++.||++.+.
T Consensus 230 sP~~wa~R~~~shp 243 (391)
T COG1453 230 SPAEWALRYLLSHP 243 (391)
T ss_pred CcHHHHHHHHhcCC
Confidence 23578888887663
|
|
| >PRK11565 dkgA 2,5-diketo-D-gluconate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=282.29 Aligned_cols=210 Identities=27% Similarity=0.341 Sum_probs=175.1
Q ss_pred eecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCeEEE
Q 025707 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVA 89 (249)
Q Consensus 12 ~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~~I~ 89 (249)
..+ ++|+.||.||||||++ +.+++.+++++|++.|||+||||+.|| +|+.+|++|+. .+|++++|+
T Consensus 7 ~~l-~~g~~v~~lglG~~~~--------~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~~~i~ 74 (275)
T PRK11565 7 IKL-QDGNVMPQLGLGVWQA--------SNEEVITAIHKALEVGYRSIDTAAIYK---NEEGVGKALKEASVAREELFIT 74 (275)
T ss_pred EEc-CCCCccCCcceECccC--------CHHHHHHHHHHHHHhCCCEEEchhhhC---CHHHHHHHHHHcCCCHHHEEEE
Confidence 446 7899999999999974 468899999999999999999999998 79999999986 469999999
Q ss_pred ecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-CCHHHHHHHHHHHHHcCCeeEEEcCCCCHH
Q 025707 90 TKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLSEASPD 168 (249)
Q Consensus 90 tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~ 168 (249)
||++. .+++.+++++++||++||+||||+|++|+|+.. .+..++|++|++|+++|+||+||+||++++
T Consensus 75 tK~~~-----------~~~~~~~~~~~~sL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~ 143 (275)
T PRK11565 75 TKLWN-----------DDHKRPREALEESLKKLQLDYVDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIH 143 (275)
T ss_pred EEecC-----------cchHHHHHHHHHHHHHhCCCceEEEEecCCCCCcCcHHHHHHHHHHHHHcCCeeEEeeccCCHH
Confidence 99862 246789999999999999999999999999765 347899999999999999999999999999
Q ss_pred HHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccccc--CCCCCCCCCCCCcccccCCCcceee
Q 025707 169 TIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF--GGKAVVESVPLDSFLVCFSSISVSF 244 (249)
Q Consensus 169 ~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l--~g~~~~~~~~~~~~~~~~~~~~~~~ 244 (249)
+++++... .++.++|++||++.+. .+++++|+++||++++|+||++|.. ........++ ..+..+.++++++|
T Consensus 144 ~l~~~~~~~~v~~~~~Q~~~~~~~~~--~~~~~~~~~~~i~~~a~spl~~G~~~~~~~~~l~~ia-~~~g~s~aq~aL~w 220 (275)
T PRK11565 144 HLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLA-DKYGKTPAQIVIRW 220 (275)
T ss_pred HHHHHHHhCCCCceeeeeecCCccch--HHHHHHHHHCCCEEEEEccCCCCCcccccCHHHHHHH-HHhCCCHHHHHHHH
Confidence 99988755 3468899999998874 6799999999999999999997731 0111111111 13445667888888
Q ss_pred eee
Q 025707 245 CFI 247 (249)
Q Consensus 245 ~~~ 247 (249)
++.
T Consensus 221 ~l~ 223 (275)
T PRK11565 221 HLD 223 (275)
T ss_pred HHc
Confidence 763
|
|
| >KOG3023 consensus Glutamate-cysteine ligase regulatory subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.3e-09 Score=84.65 Aligned_cols=107 Identities=12% Similarity=0.134 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc
Q 025707 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (249)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~ 218 (249)
+.+.|..||+++.+|+|..+|+|.++..++++++.. ..+..+|++..-.+.- ..++.+||.+++|.+...+-=. -+
T Consensus 155 lkplwk~LE~lv~~~kI~~lGvSDfda~qLe~Li~saqVvP~snqVnL~~cCvv-PpdLqafa~~hdiQLltHsDP~-~l 232 (285)
T KOG3023|consen 155 LKPLWKLLEELVGEGKIGTLGVSDFDANQLERLISSAQVVPESNQVNLGQCCVV-PPDLQAFADRHDIQLLTHSDPS-AL 232 (285)
T ss_pred HHHHHHHHHHHhccCceeeeeecccCHHHHHHHHhhhccccccceeeccccccC-CHHHHHHhhhcceeeeecCCch-hc
Confidence 457899999999999999999999999999999988 4567788866555543 3789999999999977654211 13
Q ss_pred cCCCCCCCCCCCCcccccCCCcceeeeeecC
Q 025707 219 FGGKAVVESVPLDSFLVCFSSISVSFCFITQ 249 (249)
Q Consensus 219 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (249)
|+.+.--+.+.........|.+.++|.+|||
T Consensus 233 lse~~f~e~~~~sqpdi~~p~~~~dWllRYs 263 (285)
T KOG3023|consen 233 LSESEFTEVIHKSQPDIPNPARTVDWLLRYS 263 (285)
T ss_pred CChhhhhhhhhccCcccCCCccceeeeEEEE
Confidence 3333111122245566778899999999986
|
|
| >cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.7 Score=40.35 Aligned_cols=157 Identities=15% Similarity=0.115 Sum_probs=98.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+.+.|++.|+.--. ++...+...=+++++.-. ++-|.-+... .++.+.. ..+-+.|
T Consensus 134 ~~~~~~~~~~~~~~~Gf~~iKik~g-~~~~~d~~~v~~lr~~~g-~~~l~vD~n~----------~~~~~~A-~~~~~~l 200 (316)
T cd03319 134 TPEAMAAAAKKAAKRGFPLLKIKLG-GDLEDDIERIRAIREAAP-DARLRVDANQ----------GWTPEEA-VELLREL 200 (316)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeC-CChhhHHHHHHHHHHhCC-CCeEEEeCCC----------CcCHHHH-HHHHHHH
Confidence 5677888889999999999987531 111223333344444222 5556655532 2344433 2233444
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++ .++..|-.. .-++.+.+|++...|. ..|=+-++.+.+.++++....+++|+..+..-. ....++
T Consensus 201 ~~~~l-----~~iEeP~~~----~d~~~~~~L~~~~~ipIa~~E~~~~~~~~~~~~~~~~~d~v~~~~~~~GGi~~~~~~ 271 (316)
T cd03319 201 AELGV-----ELIEQPVPA----GDDDGLAYLRDKSPLPIMADESCFSAADAARLAGGGAYDGINIKLMKTGGLTEALRI 271 (316)
T ss_pred HhcCC-----CEEECCCCC----CCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHhcCCCCEEEEeccccCCHHHHHHH
Confidence 55544 444444332 2356677788776666 335566888999999998889999998666432 122789
Q ss_pred HHHHHHhCCcEEecccCcccc
Q 025707 198 VPLCRELGIGIVPYCPLGRGF 218 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G~ 218 (249)
..+|+++|+.++..+-+..++
T Consensus 272 ~~~a~~~gi~~~~~~~~~~~i 292 (316)
T cd03319 272 ADLARAAGLKVMVGCMVESSL 292 (316)
T ss_pred HHHHHHcCCCEEEECchhhHH
Confidence 999999999999876655443
|
The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily | Back alignment and domain information |
|---|
Probab=92.94 E-value=4.8 Score=35.64 Aligned_cols=154 Identities=13% Similarity=0.095 Sum_probs=93.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC-----CchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGP-----YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSC 114 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~-----g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~ 114 (249)
+.++..+.++.+.+.|++.|-.--..+. -+-....-+++++.-.+++.|.-.... .++++...
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~~Kik~g~~~~~~~~~~~d~~~v~~ir~~~g~~~~l~vDaN~----------~~~~~~a~-- 206 (357)
T cd03316 139 SPEELAEEAKRAVAEGFTAVKLKVGGPDSGGEDLREDLARVRAVREAVGPDVDLMVDANG----------RWDLAEAI-- 206 (357)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCcchHHHHHHHHHHHHHHHhhCCCCEEEEECCC----------CCCHHHHH--
Confidence 4677788888889999999876432221 011222333444322345555554421 23444433
Q ss_pred HHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-
Q 025707 115 CEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD- 192 (249)
Q Consensus 115 ~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~- 192 (249)
+.+++|. ..++.+++.|-... .++.+.++++.-.+. ..|=+.++++.+.++++...++++|+...-.-.-
T Consensus 207 --~~~~~l~--~~~i~~iEqP~~~~----~~~~~~~l~~~~~ipi~~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~ 278 (357)
T cd03316 207 --RLARALE--EYDLFWFEEPVPPD----DLEGLARLRQATSVPIAAGENLYTRWEFRDLLEAGAVDIIQPDVTKVGGIT 278 (357)
T ss_pred --HHHHHhC--ccCCCeEcCCCCcc----CHHHHHHHHHhCCCCEEeccccccHHHHHHHHHhCCCCEEecCccccCCHH
Confidence 2333332 22445566554322 456677787775555 4445667889999999888889999976654321
Q ss_pred hhhhHHHHHHHhCCcEEeccc
Q 025707 193 IENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 193 ~~~~~~~~~~~~gi~v~a~sp 213 (249)
...++.+.|+++|+.++..+.
T Consensus 279 ~~~~i~~~a~~~g~~~~~~~~ 299 (357)
T cd03316 279 EAKKIAALAEAHGVRVAPHGA 299 (357)
T ss_pred HHHHHHHHHHHcCCeEeccCC
Confidence 127899999999999987764
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD). |
| >cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily | Back alignment and domain information |
|---|
Probab=91.36 E-value=8.1 Score=32.71 Aligned_cols=158 Identities=13% Similarity=0.139 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+.+.|++.|-.--.-. ...+...-+++++.-.+++.|.-.... .++.+...+-+ +.|
T Consensus 85 ~~~~~~~~~~~~~~~G~~~~KiKvg~~-~~~d~~~v~~vr~~~g~~~~l~vDan~----------~~~~~~a~~~~-~~l 152 (265)
T cd03315 85 EPAEVAEEARRALEAGFRTFKLKVGRD-PARDVAVVAALREAVGDDAELRVDANR----------GWTPKQAIRAL-RAL 152 (265)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCC-HHHHHHHHHHHHHhcCCCCEEEEeCCC----------CcCHHHHHHHH-HHH
Confidence 456777888888999999997643211 012223334455432334444333221 24444443333 344
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++ .++..|-... -++.+.++++.-.+. ..|=+.++...+.++++...++++|+..+..-. ....++
T Consensus 153 ~~~~i-----~~iEeP~~~~----d~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~~ 223 (265)
T cd03315 153 EDLGL-----DYVEQPLPAD----DLEGRAALARATDTPIMADESAFTPHDAFRELALGAADAVNIKTAKTGGLTKAQRV 223 (265)
T ss_pred HhcCC-----CEEECCCCcc----cHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEecccccCHHHHHHH
Confidence 44444 4455554332 356667777765555 445566788899998888889999998766543 223789
Q ss_pred HHHHHHhCCcEEecccCcccc
Q 025707 198 VPLCRELGIGIVPYCPLGRGF 218 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G~ 218 (249)
.+.|+++|+.++..+.+..|+
T Consensus 224 ~~~A~~~gi~~~~~~~~~s~i 244 (265)
T cd03315 224 LAVAEALGLPVMVGSMIESGL 244 (265)
T ss_pred HHHHHHcCCcEEecCccchHH
Confidence 999999999999877765543
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions. |
| >COG0635 HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=91.16 E-value=1.9 Score=39.29 Aligned_cols=108 Identities=19% Similarity=0.217 Sum_probs=68.2
Q ss_pred CcceeecccccC----CCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEeccccccc
Q 025707 22 SKLGYGCMSLSG----CYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVEL 97 (249)
Q Consensus 22 s~lg~Gt~~~~~----~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~ 97 (249)
.++++|..+|.. .-+...+.+++.++++.|.+.|+.-+-.--.||
T Consensus 149 NRiSlGVQsf~~~~lk~lgR~h~~~~~~~a~~~~~~~g~~~in~DLIyg------------------------------- 197 (416)
T COG0635 149 NRISLGVQSFNDEVLKALGRIHDEEEAKEAVELARKAGFTSINIDLIYG------------------------------- 197 (416)
T ss_pred CEEEeccccCCHHHHHHhcCCCCHHHHHHHHHHHHHcCCCcEEEEeecC-------------------------------
Confidence 367777766554 233334667777777777777777666666665
Q ss_pred CCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEee-cCCCC-----------CCHH---HHHHH-HHHHHHcCCeeEEE
Q 025707 98 GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQH-RVDTS-----------VPIE---ETIGE-MKKLVEEGKIKYIG 161 (249)
Q Consensus 98 ~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh-~~~~~-----------~~~~---~~~~~-l~~l~~~G~ir~iG 161 (249)
.|..+.+.+.+.++..+ .|+.|||.+|.+- -|... .+.+ +.++. .+.|.+.|. +.||
T Consensus 198 -----lP~QT~~~~~~~l~~a~-~l~pdhis~y~L~~~p~t~~~~~~~~~~~lP~~d~~~~~~~~~~e~L~~~Gy-~~ye 270 (416)
T COG0635 198 -----LPGQTLESLKEDLEQAL-ELGPDHLSLYSLAIEPGTKFAQRKIKGKALPDEDEKADMYELVEELLEKAGY-RQYE 270 (416)
T ss_pred -----CCCCCHHHHHHHHHHHH-hCCCCEEEEeeeecCCCchhhhhcccCCCCcChHHHHHHHHHHHHHHHHCCC-cEEe
Confidence 11245677777777666 4779999999883 33221 1111 33444 345566777 9999
Q ss_pred cCCCCH
Q 025707 162 LSEASP 167 (249)
Q Consensus 162 vs~~~~ 167 (249)
+|||..
T Consensus 271 isnfa~ 276 (416)
T COG0635 271 ISNFAK 276 (416)
T ss_pred echhcC
Confidence 999986
|
|
| >KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.41 E-value=11 Score=33.85 Aligned_cols=169 Identities=17% Similarity=0.257 Sum_probs=95.4
Q ss_pred ccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC----CchHHHHHHHHHc-----CCCCCeEEEe
Q 025707 20 EVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP----YTNEILLGKALKE-----LPRENIQVAT 90 (249)
Q Consensus 20 ~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~----g~se~~lg~~l~~-----~~r~~~~I~t 90 (249)
+|-+++.|-=+..+.+ -+.+++.+++..|++.|- .+.|+. -.+.+.+.+.+.+ ...++++|++
T Consensus 62 ~iipl~~GDPsv~~~~---~ts~~a~~Av~~al~Sgk-----~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~lts 133 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCF---RTSQEAEQAVVDALRSGK-----GNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTS 133 (447)
T ss_pred eeccCCCCCCCccccc---cCCHHHHHHHHHHHhcCC-----CCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEec
Confidence 4455666533322222 245778888888888873 245554 3588888888765 5678888877
Q ss_pred cccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC---C--
Q 025707 91 KFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE---A-- 165 (249)
Q Consensus 91 K~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~---~-- 165 (249)
-. .++++-.+..|-...-. +++-+|.- ++-+ ++..... =-||++-+=. |
T Consensus 134 GC-------------------~qAIe~~i~~LA~p~aN-ILlPrPGf--p~Y~---~~a~~~~-lEVR~ydlLPe~~weI 187 (447)
T KOG0259|consen 134 GC-------------------SQAIELAISSLANPGAN-ILLPRPGF--PLYD---TRAIYSG-LEVRYYDLLPEKDWEI 187 (447)
T ss_pred cc-------------------hHHHHHHHHHhcCCCCc-eecCCCCC--chHH---HhhhhcC-ceeEeecccCccccee
Confidence 53 34455555555533333 34433422 2211 1111111 1456665522 2
Q ss_pred CHHHHHHHhhcCCce-EEeeecCc----cccchhhhHHHHHHHhCCcEEecccCcccccCCC
Q 025707 166 SPDTIRRAHAVHPIT-AVQLEWSL----WARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (249)
Q Consensus 166 ~~~~l~~~~~~~~~~-~~q~~~n~----~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~ 222 (249)
+.++++.+++...+. ++.++.|+ +...+.+++.+.|+++||.||+--.++.=.+.++
T Consensus 188 DL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~ 249 (447)
T KOG0259|consen 188 DLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDK 249 (447)
T ss_pred chHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCC
Confidence 335666666654333 34444444 3444569999999999999998666554443333
|
|
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
|---|
Probab=90.24 E-value=7.6 Score=31.51 Aligned_cols=150 Identities=18% Similarity=0.203 Sum_probs=95.2
Q ss_pred HHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHH-----------
Q 025707 46 SIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSC----------- 114 (249)
Q Consensus 46 ~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~----------- 114 (249)
++|..-++.|-+.+|-.-..| .+-+.|++ ..++.. . ....+++.+.++
T Consensus 5 ~~I~~~I~pgsrVLDLGCGdG------~LL~~L~~--~k~v~g----~---------GvEid~~~v~~cv~rGv~Viq~D 63 (193)
T PF07021_consen 5 QIIAEWIEPGSRVLDLGCGDG------ELLAYLKD--EKQVDG----Y---------GVEIDPDNVAACVARGVSVIQGD 63 (193)
T ss_pred HHHHHHcCCCCEEEecCCCch------HHHHHHHH--hcCCeE----E---------EEecCHHHHHHHHHcCCCEEECC
Confidence 456667788999999776555 45556653 111111 0 112345555444
Q ss_pred HHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc-C-CceEEeeecCccccc
Q 025707 115 CEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV-H-PITAVQLEWSLWARD 192 (249)
Q Consensus 115 ~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~-~~~~~q~~~n~~~~~ 192 (249)
+++.|..+.-+.+|.+.+... -..+..--+.|+++..-|+---|++.||.-+..+..+-. . -+..-.++|+-++..
T Consensus 64 ld~gL~~f~d~sFD~VIlsqt--LQ~~~~P~~vL~EmlRVgr~~IVsFPNFg~W~~R~~l~~~GrmPvt~~lPy~WYdTP 141 (193)
T PF07021_consen 64 LDEGLADFPDQSFDYVILSQT--LQAVRRPDEVLEEMLRVGRRAIVSFPNFGHWRNRLQLLLRGRMPVTKALPYEWYDTP 141 (193)
T ss_pred HHHhHhhCCCCCccEEehHhH--HHhHhHHHHHHHHHHHhcCeEEEEecChHHHHHHHHHHhcCCCCCCCCCCCcccCCC
Confidence 555666666667777766432 122333455577778888888899999987776654442 2 244566777666532
Q ss_pred -----hhhhHHHHHHHhCCcEEecccCcccc
Q 025707 193 -----IENEIVPLCRELGIGIVPYCPLGRGF 218 (249)
Q Consensus 193 -----~~~~~~~~~~~~gi~v~a~spl~~G~ 218 (249)
--.+.-++|++.|+.|.-..++..+.
T Consensus 142 Nih~~Ti~DFe~lc~~~~i~I~~~~~~~~~~ 172 (193)
T PF07021_consen 142 NIHLCTIKDFEDLCRELGIRIEERVFLDGGR 172 (193)
T ss_pred CcccccHHHHHHHHHHCCCEEEEEEEEcCCC
Confidence 12789999999999999999988765
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily | Back alignment and domain information |
|---|
Probab=90.12 E-value=3.5 Score=34.65 Aligned_cols=105 Identities=14% Similarity=0.118 Sum_probs=68.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcC-CeeEEEcCCCCHHHHHHHhhcCCceEEee
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLSEASPDTIRRAHAVHPITAVQL 184 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 184 (249)
++.+...+-+ +.|..+|+++|++-....+.........++.++++++.+ .++...++....+.++.+.+. .++.+++
T Consensus 16 ~s~e~~~~i~-~~L~~~GV~~IEvg~~~~~~~~p~~~~~~~~i~~l~~~~~~~~~~~l~~~~~~~i~~a~~~-g~~~i~i 93 (265)
T cd03174 16 FSTEDKLEIA-EALDEAGVDSIEVGSGASPKAVPQMEDDWEVLRAIRKLVPNVKLQALVRNREKGIERALEA-GVDEVRI 93 (265)
T ss_pred CCHHHHHHHH-HHHHHcCCCEEEeccCcCccccccCCCHHHHHHHHHhccCCcEEEEEccCchhhHHHHHhC-CcCEEEE
Confidence 4555554444 457789999999888765433222345788888888888 577767776666777777665 3556666
Q ss_pred ecCccc--------c------chhhhHHHHHHHhCCcEEecc
Q 025707 185 EWSLWA--------R------DIENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 185 ~~n~~~--------~------~~~~~~~~~~~~~gi~v~a~s 212 (249)
.+..-+ + ......+++++++|+.+...-
T Consensus 94 ~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~ 135 (265)
T cd03174 94 FDSASETHSRKNLNKSREEDLENAEEAIEAAKEAGLEVEGSL 135 (265)
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 554431 1 112567888889998876544
|
The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM". |
| >COG0135 TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.93 E-value=2.9 Score=34.41 Aligned_cols=88 Identities=16% Similarity=0.189 Sum_probs=58.4
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCCHHHHHHHhhcCCceEEeeecCccccchhhhH
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLEWSLWARDIENEI 197 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~ 197 (249)
...+|.||+-+++.-...+....+++-+....... ++.+||. |.+.+.+.++++..+++.+|+.-. ...+.
T Consensus 18 a~~~gad~iG~If~~~SpR~Vs~~~a~~i~~~v~~---~~~VgVf~n~~~~~i~~i~~~~~ld~VQlHG~-----e~~~~ 89 (208)
T COG0135 18 AAKAGADYIGFIFVPKSPRYVSPEQAREIASAVPK---VKVVGVFVNESIEEILEIAEELGLDAVQLHGD-----EDPEY 89 (208)
T ss_pred HHHcCCCEEEEEEcCCCCCcCCHHHHHHHHHhCCC---CCEEEEECCCCHHHHHHHHHhcCCCEEEECCC-----CCHHH
Confidence 34689999998888654455555544443333322 7899986 567788999999999999999533 23556
Q ss_pred HHHHHHhC-CcEEecccC
Q 025707 198 VPLCRELG-IGIVPYCPL 214 (249)
Q Consensus 198 ~~~~~~~g-i~v~a~spl 214 (249)
++..++.. +.|+-.-+.
T Consensus 90 ~~~l~~~~~~~v~kai~v 107 (208)
T COG0135 90 IDQLKEELGVPVIKAISV 107 (208)
T ss_pred HHHHHhhcCCceEEEEEe
Confidence 66666654 666543333
|
|
| >PRK01222 N-(5'-phosphoribosyl)anthranilate isomerase; Provisional | Back alignment and domain information |
|---|
Probab=89.37 E-value=2.9 Score=34.40 Aligned_cols=66 Identities=20% Similarity=0.224 Sum_probs=46.9
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCCHHHHHHHhhcCCceEEeeec
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
+..+|.|++-+++..........+.+-+....+ .+.++.+||. +-+++.+.++++..+++++|+.-
T Consensus 19 ~~~~Gad~iGfI~~~~S~R~V~~~~a~~i~~~~--~~~i~~VgVf~~~~~~~i~~~~~~~~~d~vQLHg 85 (210)
T PRK01222 19 AAELGADAIGFVFYPKSPRYVSPEQAAELAAAL--PPFVKVVGVFVNASDEEIDEIVETVPLDLLQLHG 85 (210)
T ss_pred HHHcCCCEEEEccCCCCCCcCCHHHHHHHHHhC--CCCCCEEEEEeCCCHHHHHHHHHhcCCCEEEECC
Confidence 346999999998555444445454444443333 3568899997 67888999999889999999953
|
|
| >cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain | Back alignment and domain information |
|---|
Probab=89.28 E-value=14 Score=32.10 Aligned_cols=184 Identities=16% Similarity=0.139 Sum_probs=94.3
Q ss_pred cceeecccccCCCCCCCCHHHHHHHHHHHHH-cCCCeEeCCCCcCCCc---hHHHHHHHHHcC--CCCCeEEEecccccc
Q 025707 23 KLGYGCMSLSGCYNSPLSEEDGISIIKHAFS-KGITFFDTADKYGPYT---NEILLGKALKEL--PRENIQVATKFGFVE 96 (249)
Q Consensus 23 ~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~---se~~lg~~l~~~--~r~~~~I~tK~~~~~ 96 (249)
.|.||+|.-........+.++..+.+...++ .|++.+|-..-|+.-. +-..+-++|+.+ .+..+.|+.-+....
T Consensus 71 iiS~GG~~g~~~~~~~~~~~~~~~a~~~~i~~y~~dgiDfDiE~~~~~d~~~~~~~~~al~~Lq~~~p~l~vs~Tlp~~p 150 (294)
T cd06543 71 IVSFGGASGTPLATSCTSADQLAAAYQKVIDAYGLTHLDFDIEGGALTDTAAIDRRAQALALLQKEYPDLKISFTLPVLP 150 (294)
T ss_pred EEEecCCCCCccccCcccHHHHHHHHHHHHHHhCCCeEEEeccCCccccchhHHHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 4677877533211122356666666666664 4999999876665321 235566666652 223455555443221
Q ss_pred cCCcccccCCCHHHHHHHHHHHHHHcCC--CceeEEEeecCCC--CCC-HHHHHHHHHHHHHcCCeeEEEcCCCCHHHHH
Q 025707 97 LGFTSVIVKGTPEYVRSCCEASLRRLDV--EYIDLYYQHRVDT--SVP-IEETIGEMKKLVEEGKIKYIGLSEASPDTIR 171 (249)
Q Consensus 97 ~~~~~~~~~~s~~~i~~~~~~sL~~Lg~--d~iDl~~lh~~~~--~~~-~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~ 171 (249)
. ..+++.+ .+-+..+.-|+ |+|.++-+..-.. ..+ -..+..+++.++.+=+--+=+ ++..++-
T Consensus 151 ~-------gl~~~g~--~~l~~a~~~Gv~~d~VNiMtmDyg~~~~~~~mg~~a~~aa~~~~~ql~~~~~~---~s~~~~~ 218 (294)
T cd06543 151 T-------GLTPDGL--NVLEAAAANGVDLDTVNIMTMDYGSSAGSQDMGAAAISAAESLHDQLKDLYPK---LSDAELW 218 (294)
T ss_pred C-------CCChhHH--HHHHHHHHcCCCcceeeeeeecCCCCCCcccHHHHHHHHHHHHHHHHHHHccC---CCHHHHH
Confidence 1 1233322 24444455664 5666555543332 122 344556666665442211111 4444444
Q ss_pred HHhhcCC-ceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc
Q 025707 172 RAHAVHP-ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (249)
Q Consensus 172 ~~~~~~~-~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~ 218 (249)
..+...| +-.+-..-.++.....+.+.+|++++||+-+++..+.+..
T Consensus 219 ~~ig~TpMiG~nD~~~e~ft~~da~~~~~fA~~~~l~~~s~Ws~~RD~ 266 (294)
T cd06543 219 AMIGVTPMIGVNDVGSEVFTLADAQTLVDFAKEKGLGRLSMWSLNRDR 266 (294)
T ss_pred HHccccccccccCCCCceeeHHHHHHHHHHHHhCCCCeEeeeeccCCC
Confidence 4444432 1111110002222223889999999999999999987654
|
Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature. |
| >PRK13958 N-(5'-phosphoribosyl)anthranilate isomerase; Provisional | Back alignment and domain information |
|---|
Probab=88.87 E-value=1.7 Score=35.68 Aligned_cols=67 Identities=13% Similarity=0.149 Sum_probs=49.0
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCCHHHHHHHhhcCCceEEeeec
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
.+..+|.|++-+++..........+.+-+..+.+ .+.++.+||. |.+++.+.+..+..+++++|+.-
T Consensus 16 ~~~~~GaD~iGfIf~~~SpR~V~~~~a~~i~~~~--~~~~~~VgVf~~~~~~~i~~~~~~~~~d~vQLHG 83 (207)
T PRK13958 16 AASQLPIDAIGFIHYEKSKRHQTITQIKKLASAV--PNHIDKVCVVVNPDLTTIEHILSNTSINTIQLHG 83 (207)
T ss_pred HHHHcCCCEEEEecCCCCcccCCHHHHHHHHHhC--CCCCCEEEEEeCCCHHHHHHHHHhCCCCEEEECC
Confidence 3456999999998666555555555554444433 2568889995 78889999999888999999953
|
|
| >PF00682 HMGL-like: HMGL-like of this family is not conserved in other members | Back alignment and domain information |
|---|
Probab=88.43 E-value=7.5 Score=32.21 Aligned_cols=149 Identities=15% Similarity=0.205 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCC-CCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTA-DKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta-~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
.+.++..++++...++||..|++. +..+. ...+.+.+..+..+..++..... ...+.++..++.
T Consensus 11 ~~~~~k~~i~~~L~~~Gv~~iEvg~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~--------------~~~~~i~~~~~~ 75 (237)
T PF00682_consen 11 FSTEEKLEIAKALDEAGVDYIEVGFPFASE-DDFEQVRRLREALPNARLQALCR--------------ANEEDIERAVEA 75 (237)
T ss_dssp --HHHHHHHHHHHHHHTTSEEEEEHCTSSH-HHHHHHHHHHHHHHSSEEEEEEE--------------SCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCEEEEcccccCH-HHHHHhhhhhhhhcccccceeee--------------ehHHHHHHHHHh
Confidence 578999999999999999999999 44431 23334444444333333322222 235556666654
Q ss_pred HHHHcCCCceeEEEeecCC---------CCCCHHHHHHHHHHHHHcCCeeEEEcCC---CCHHHHHHHhhc---CCceEE
Q 025707 118 SLRRLDVEYIDLYYQHRVD---------TSVPIEETIGEMKKLVEEGKIKYIGLSE---ASPDTIRRAHAV---HPITAV 182 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~---------~~~~~~~~~~~l~~l~~~G~ir~iGvs~---~~~~~l~~~~~~---~~~~~~ 182 (249)
. ...|.+.+.++.--+.. ....++.+.+..+..++.|....+++.. ++++.+.++.+. .+++.+
T Consensus 76 ~-~~~g~~~i~i~~~~s~~~~~~~~~~~~~~~~~~~~~~v~~ak~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i 154 (237)
T PF00682_consen 76 A-KEAGIDIIRIFISVSDLHIRKNLNKSREEALERIEEAVKYAKELGYEVAFGCEDASRTDPEELLELAEALAEAGADII 154 (237)
T ss_dssp H-HHTTSSEEEEEEETSHHHHHHHTCSHHHHHHHHHHHHHHHHHHTTSEEEEEETTTGGSSHHHHHHHHHHHHHHT-SEE
T ss_pred h-HhccCCEEEecCcccHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCceEeCccccccccHHHHHHHHHHHHHcCCeEE
Confidence 4 46788877766432220 0111445566677777888888888754 455554444332 234443
Q ss_pred eee--cCccccchhhhHHHHHHH
Q 025707 183 QLE--WSLWARDIENEIVPLCRE 203 (249)
Q Consensus 183 q~~--~n~~~~~~~~~~~~~~~~ 203 (249)
.+. +..+.+..-.++++..++
T Consensus 155 ~l~Dt~G~~~P~~v~~lv~~~~~ 177 (237)
T PF00682_consen 155 YLADTVGIMTPEDVAELVRALRE 177 (237)
T ss_dssp EEEETTS-S-HHHHHHHHHHHHH
T ss_pred EeeCccCCcCHHHHHHHHHHHHH
Confidence 332 233333222445555554
|
are a sub-families of this Pfam.; InterPro: IPR000891 Pyruvate carboxylase (6.4.1.1 from EC) (PC), a member of the biotin-dependent enzyme family, is involved in the gluconeogenesis by mediating the carboxylation of pyruvate to oxaloacetate. Biotin-dependent carboxylase enzymes perform a two step reaction. Enzyme-bound biotin is first carboxylated by bicarbonate and ATP and the carboxyl group temporarily bound to biotin is subsequently transferred to an acceptor substrate such as pyruvate []. PC has three functional domains: a biotin carboxylase (BC) domain, a carboxyltransferase (CT) domain which perform the second part of the reaction and a biotinyl domain [, ]. The mechanism by which the carboxyl group is transferred from the carboxybiotin to the pyruvate is not well understood. The pyruvate carboxyltransferase domain is also found in other pyruvate binding enzymes and acetyl-CoA dependent enzymes suggesting that this domain can be associated with different enzymatic activities. This domain is found towards the N-terminal region of various aldolase enzymes. This N-terminal TIM barrel domain [] interacts with the C-terminal domain. The C-terminal DmpG_comm domain (IPR012425 from INTERPRO) is thought to promote heterodimerisation with members of IPR003361 from INTERPRO to form a bifunctional aldolase-dehydrogenase []. ; GO: 0003824 catalytic activity; PDB: 3MP5_E 3MP3_E 2CW6_E 3MP4_D 3HBL_A 3HB9_C 3HO8_A 3BG5_C 1YDN_B 3RMJ_A .... |
| >cd03323 D-glucarate_dehydratase D-Glucarate dehydratase (GlucD) catalyzes the dehydration of both D-glucarate and L-idarate to form 5-keto-4-deoxy-D-glucarate (5-KDG) , the initial reaction of the catabolic pathway for (D)-glucarate | Back alignment and domain information |
|---|
Probab=88.37 E-value=19 Score=32.58 Aligned_cols=151 Identities=14% Similarity=0.086 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+.+ .|++.|=.-..-.+...+...-+++++.-. ++.|..-... .++++... +.
T Consensus 168 ~~e~~~~~a~~~~~~~Gf~~~KiKvG~~~~~~di~~v~avRea~~-~~~l~vDaN~----------~w~~~~A~----~~ 232 (395)
T cd03323 168 TPEGVVRLARAAIDRYGFKSFKLKGGVLPGEEEIEAVKALAEAFP-GARLRLDPNG----------AWSLETAI----RL 232 (395)
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEecCCCCHHHHHHHHHHHHHhCC-CCcEEEeCCC----------CcCHHHHH----HH
Confidence 56667777777775 699998654311111122222334443222 3444333211 24454433 33
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~ 196 (249)
+++|. . ++.++..|-. -++.+.+|++...+. ..|-|.++...+.++++...++++|......-.- ...+
T Consensus 233 ~~~l~--~-~l~~iEeP~~------d~~~~~~L~~~~~~PIa~dEs~~~~~~~~~~i~~~avdil~~d~~~~GGit~~~k 303 (395)
T cd03323 233 AKELE--G-VLAYLEDPCG------GREGMAEFRRATGLPLATNMIVTDFRQLGHAIQLNAVDIPLADHHFWGGMRGSVR 303 (395)
T ss_pred HHhcC--c-CCCEEECCCC------CHHHHHHHHHhcCCCEEcCCcccCHHHHHHHHHcCCCcEEeeccccccCHHHHHH
Confidence 34553 2 6667766643 467778888876555 5566778888999998888899999986654321 1278
Q ss_pred HHHHHHHhCCcEEecccC
Q 025707 197 IVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl 214 (249)
+.+.|+++|+.+...+..
T Consensus 304 ia~~A~~~gi~~~~h~~~ 321 (395)
T cd03323 304 VAQVCETWGLGWGMHSNN 321 (395)
T ss_pred HHHHHHHcCCeEEEecCc
Confidence 999999999999987765
|
GlucD belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion. |
| >PRK13796 GTPase YqeH; Provisional | Back alignment and domain information |
|---|
Probab=88.18 E-value=18 Score=32.41 Aligned_cols=124 Identities=14% Similarity=0.166 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHHHHcC---CCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFSKG---ITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~G---i~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~ 115 (249)
.+.++..++++..-+.- +-.+|....-+ .-...+.+... .+.-++|.+|..... .....+.+.+-+
T Consensus 54 ~~~~~~~~~l~~i~~~~~lIv~VVD~~D~~~--s~~~~L~~~~~--~kpviLViNK~DLl~-------~~~~~~~i~~~l 122 (365)
T PRK13796 54 LTDDDFLKLLNGIGDSDALVVNVVDIFDFNG--SWIPGLHRFVG--NNPVLLVGNKADLLP-------KSVKKNKVKNWL 122 (365)
T ss_pred CCHHHHHHHHHhhcccCcEEEEEEECccCCC--chhHHHHHHhC--CCCEEEEEEchhhCC-------CccCHHHHHHHH
Confidence 57777888888887655 45567665443 22334444432 456788999987532 123456676677
Q ss_pred HHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHh
Q 025707 116 EASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH 174 (249)
Q Consensus 116 ~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~ 174 (249)
+...+.+|....|++.+... ....++++++.+.++.+.+.+--+|.+|..-+.+...+
T Consensus 123 ~~~~k~~g~~~~~v~~vSAk-~g~gI~eL~~~I~~~~~~~~v~vvG~~NvGKSTLiN~L 180 (365)
T PRK13796 123 RQEAKELGLRPVDVVLISAQ-KGHGIDELLEAIEKYREGRDVYVVGVTNVGKSTLINRI 180 (365)
T ss_pred HHHHHhcCCCcCcEEEEECC-CCCCHHHHHHHHHHhcCCCeEEEEcCCCCcHHHHHHHH
Confidence 77777888755577776543 34568889999988888889999999999887665543
|
|
| >PRK08609 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=85.63 E-value=14 Score=35.29 Aligned_cols=149 Identities=16% Similarity=0.192 Sum_probs=81.2
Q ss_pred HHHHHHHHHHcCCCeEeCCCCcCC-----CchHHHHHHHHHc-------CCCCCeEEEecccccccCCcccccCCCHHHH
Q 025707 44 GISIIKHAFSKGITFFDTADKYGP-----YTNEILLGKALKE-------LPRENIQVATKFGFVELGFTSVIVKGTPEYV 111 (249)
Q Consensus 44 ~~~~l~~A~~~Gi~~~Dta~~Yg~-----g~se~~lg~~l~~-------~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i 111 (249)
..++++.|.+.|+..|=.++++.. +.+...+-..++. ...=+|++..=+.. .++..
T Consensus 351 leemv~~A~~~Gl~~i~iTdH~~~~~~~~~~~~~~l~~~~~ei~~l~~~~~~i~Il~GiEv~i------------~~~g~ 418 (570)
T PRK08609 351 IEEMVEACIAKGYEYMAITDHSQYLKVANGLTEERLLEQAEEIKALNEKYPEIDILSGIEMDI------------LPDGS 418 (570)
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCCccccCCCCHHHHHHHHHHHHHHHHhcCCCeEEEEEEEee------------cCCcc
Confidence 445999999999999988877521 2233333333222 11112222222221 11111
Q ss_pred HHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC------CC--H---HHHHHHhhcCCce
Q 025707 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------AS--P---DTIRRAHAVHPIT 180 (249)
Q Consensus 112 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~------~~--~---~~l~~~~~~~~~~ 180 (249)
..-.+..|+. .||+ +.-+|++- ..+.+++++.+.++.+.|.+--||=-. .. . +.+.+++.... .
T Consensus 419 ~d~~~~~L~~--~D~v-I~SvH~~~-~~~~~~~~~~l~~a~~~~~~dILaHpd~rli~~~~~~~~d~~~i~~~a~~~G-~ 493 (570)
T PRK08609 419 LDYDDEVLAE--LDYV-IAAIHSSF-SQSEEEIMKRLENACRNPYVRLIAHPTGRLIGRRDGYDVNIDQLIELAKETN-T 493 (570)
T ss_pred hhhcHHHHHh--hCEE-EEEeecCC-CCCHHHHHHHHHHHhcCCCceEEECCCccccccCCCchHHHHHHHHHHHHhC-C
Confidence 2223334554 4665 67778653 234677888899998888887776543 11 1 23333322222 3
Q ss_pred EEeeecCccccchhhhHHHHHHHhCCcEE
Q 025707 181 AVQLEWSLWARDIENEIVPLCRELGIGIV 209 (249)
Q Consensus 181 ~~q~~~n~~~~~~~~~~~~~~~~~gi~v~ 209 (249)
++|++-+.+.......+++.|.+.|+.+.
T Consensus 494 ~lEINa~~~r~~~~~~~~~~~~e~Gv~i~ 522 (570)
T PRK08609 494 ALELNANPNRLDLSAEHLKKAQEAGVKLA 522 (570)
T ss_pred EEEEcCCccccCccHHHHHHHHHcCCEEE
Confidence 45555554433334779999999998765
|
|
| >COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=85.27 E-value=21 Score=31.44 Aligned_cols=118 Identities=19% Similarity=0.189 Sum_probs=73.7
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCC--------------C----chHHHHHHHHHcCCCCCeEEEecccccccCCc
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADKYGP--------------Y----TNEILLGKALKELPRENIQVATKFGFVELGFT 100 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~--------------g----~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~ 100 (249)
++.+....+.+.|-+.|+-+|=|--.+.. + .....|....+ ..+.+++||-.
T Consensus 87 ~p~e~~~~Lke~a~~~Gi~~~SSPfd~~svd~l~~~~~~ayKIaS~E~~~~plik~iA~--~~kPiIlSTGm-------- 156 (347)
T COG2089 87 TPLEWHAQLKEYARKRGIIFFSSPFDLTAVDLLESLNPPAYKIASGEINDLPLIKYIAK--KGKPIILSTGM-------- 156 (347)
T ss_pred CCHHHHHHHHHHHHHcCeEEEecCCCHHHHHHHHhcCCCeEEecCccccChHHHHHHHh--cCCCEEEEccc--------
Confidence 57888999999999999988866443321 0 12223332222 34466776653
Q ss_pred ccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-CCHHHH-HHHHHHHHHcCCeeEEEcCCCCHHHHHHHhh
Q 025707 101 SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPIEET-IGEMKKLVEEGKIKYIGLSEASPDTIRRAHA 175 (249)
Q Consensus 101 ~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-~~~~~~-~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~ 175 (249)
.+-+.+.++++...++ |.. |+.++|+.+.. .+.+++ +..+-.|++.= ---||+|.|+..-+..+..
T Consensus 157 -----a~~~ei~~av~~~r~~-g~~--~i~LLhC~s~YPap~ed~NL~~i~~l~~~F-n~~vGlSDHT~g~~a~l~A 224 (347)
T COG2089 157 -----ATIEEIEEAVAILREN-GNP--DIALLHCTSAYPAPFEDVNLKAIPKLAEAF-NAIVGLSDHTLGILAPLAA 224 (347)
T ss_pred -----ccHHHHHHHHHHHHhc-CCC--CeEEEEecCCCCCCHHHhhHHHHHHHHHHh-CCccccccCccchhHHHHH
Confidence 2456777777755544 433 99999997664 445442 55555555542 4579999999875554443
|
|
| >cd03318 MLE Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway | Back alignment and domain information |
|---|
Probab=85.07 E-value=27 Score=31.04 Aligned_cols=153 Identities=10% Similarity=0.064 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHcC-CCeEeCCCCc-CCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 41 EEDGISIIKHAFSKG-ITFFDTADKY-GPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 41 ~~~~~~~l~~A~~~G-i~~~Dta~~Y-g~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
.++..+.+..+++.| ++.|=.--.- ......+.+ +++++.-.+++-|.--.. . .++++...+ +-+.
T Consensus 143 ~~~~~~~~~~~~~~G~f~~~KiKvg~~~~~~d~~~v-~avr~~~g~~~~l~iDaN--~--------~~~~~~A~~-~~~~ 210 (365)
T cd03318 143 TERDIAEAEEMLEAGRHRRFKLKMGARPPADDLAHV-EAIAKALGDRASVRVDVN--Q--------AWDESTAIR-ALPR 210 (365)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEeCCCChHHHHHHH-HHHHHHcCCCcEEEEECC--C--------CCCHHHHHH-HHHH
Confidence 344556667778899 9988653210 100122333 444442233443432221 1 234443322 2233
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+ ++.++..|-... -++.+.+|+++..+. ..|=+.++...+.++++...++++|+.....-. ....+
T Consensus 211 l~~~-----~~~~iEeP~~~~----~~~~~~~l~~~~~~pia~dE~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~~ 281 (365)
T cd03318 211 LEAA-----GVELIEQPVPRE----NLDGLARLRSRNRVPIMADESVSGPADAFELARRGAADVFSLKIAKSGGLRRAQK 281 (365)
T ss_pred HHhc-----CcceeeCCCCcc----cHHHHHHHHhhcCCCEEcCcccCCHHHHHHHHHhCCCCeEEEeecccCCHHHHHH
Confidence 4444 445565553322 357777787775555 556777888999999888788899987655432 11278
Q ss_pred HHHHHHHhCCcEEecccC
Q 025707 197 IVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl 214 (249)
+...|+++|+.++..+.+
T Consensus 282 ~~~~a~~~gi~~~~~~~~ 299 (365)
T cd03318 282 VAAIAEAAGIALYGGTML 299 (365)
T ss_pred HHHHHHHcCCceeecCcc
Confidence 999999999999865433
|
This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion. |
| >TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family | Back alignment and domain information |
|---|
Probab=84.64 E-value=20 Score=29.07 Aligned_cols=145 Identities=11% Similarity=0.021 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc----CCCCCeEEEecccccccCCcccccCCCHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~ 115 (249)
+.+++.++++.|++.|+...|.- +..+..++.. ..++++++.-=. ...+.+++.+
T Consensus 10 d~~~~~~~v~~~l~~g~~~~~i~--------~~~l~p~m~~iG~~w~~gei~va~~~-------------~a~~~~~~~l 68 (197)
T TIGR02370 10 EEDDVVEGAQKALDAGIDPIELI--------EKGLMAGMGVVGKLFEDGELFLPHVM-------------MSADAMLAGI 68 (197)
T ss_pred CHHHHHHHHHHHHHcCCCHHHHH--------HHHHHHHHHHHHHHHcCCCccHHHHH-------------HHHHHHHHHH
Confidence 78999999999999998766643 2334444433 345666553221 2244556666
Q ss_pred HHHHHHcCCC----ceeEEEeecCCCCCCHHHHHHHHHHHHHcCC-eeEEEcCCCCHHHHHHHhhcCCceEEeeecCccc
Q 025707 116 EASLRRLDVE----YIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWA 190 (249)
Q Consensus 116 ~~sL~~Lg~d----~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~ 190 (249)
+.....+..+ .---+++-.+..+.+--...-...-|+..|. |.++|. +.+++.+.+.+....++++.+.+....
T Consensus 69 ~~l~~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~-~vp~e~~v~~~~~~~pd~v~lS~~~~~ 147 (197)
T TIGR02370 69 KVLTPEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGR-DVPIDTVVEKVKKEKPLMLTGSALMTT 147 (197)
T ss_pred HHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCC-CCCHHHHHHHHHHcCCCEEEEcccccc
Confidence 6555555421 1113344444433332222333334556675 555774 566678888888888899988876655
Q ss_pred cchh-hhHHHHHHHhCC
Q 025707 191 RDIE-NEIVPLCRELGI 206 (249)
Q Consensus 191 ~~~~-~~~~~~~~~~gi 206 (249)
.... .++++.+++.|.
T Consensus 148 ~~~~~~~~i~~l~~~~~ 164 (197)
T TIGR02370 148 TMYGQKDINDKLKEEGY 164 (197)
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 4333 789999999854
|
This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere. |
| >PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac) | Back alignment and domain information |
|---|
Probab=83.72 E-value=8.8 Score=32.33 Aligned_cols=113 Identities=24% Similarity=0.202 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCC------------------CchHHHHHHHHHcCCCCCeEEEecccccccCCc
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADKYGP------------------YTNEILLGKALKELPRENIQVATKFGFVELGFT 100 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~------------------g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~ 100 (249)
.+.++..++.++|-+.||.||=|...-.. =.+-..|-+.- .....++|+|=.
T Consensus 53 l~~e~~~~L~~~~~~~gi~f~stpfd~~s~d~l~~~~~~~~KIaS~dl~n~~lL~~~A--~tgkPvIlSTG~-------- 122 (241)
T PF03102_consen 53 LSEEQHKELFEYCKELGIDFFSTPFDEESVDFLEELGVPAYKIASGDLTNLPLLEYIA--KTGKPVILSTGM-------- 122 (241)
T ss_dssp S-HHHHHHHHHHHHHTT-EEEEEE-SHHHHHHHHHHT-SEEEE-GGGTT-HHHHHHHH--TT-S-EEEE-TT--------
T ss_pred CCHHHHHHHHHHHHHcCCEEEECCCCHHHHHHHHHcCCCEEEeccccccCHHHHHHHH--HhCCcEEEECCC--------
Confidence 58899999999999999999977643320 01111221111 134456666642
Q ss_pred ccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-CCHHH-HHHHHHHHHHcCCeeEEEcCCCCHHHH
Q 025707 101 SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPIEE-TIGEMKKLVEEGKIKYIGLSEASPDTI 170 (249)
Q Consensus 101 ~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-~~~~~-~~~~l~~l~~~G~ir~iGvs~~~~~~l 170 (249)
.+.+.|+++++...++- .-++.++|+.... .+.++ -+..+..|++.=- --||+|.|+....
T Consensus 123 -----stl~EI~~Av~~~~~~~---~~~l~llHC~s~YP~~~e~~NL~~i~~L~~~f~-~~vG~SDHt~g~~ 185 (241)
T PF03102_consen 123 -----STLEEIERAVEVLREAG---NEDLVLLHCVSSYPTPPEDVNLRVIPTLKERFG-VPVGYSDHTDGIE 185 (241)
T ss_dssp -------HHHHHHHHHHHHHHC---T--EEEEEE-SSSS--GGG--TTHHHHHHHHST-SEEEEEE-SSSSH
T ss_pred -----CCHHHHHHHHHHHHhcC---CCCEEEEecCCCCCCChHHcChHHHHHHHHhcC-CCEEeCCCCCCcH
Confidence 34677777777664444 4589999998664 33333 4666666665422 5789999987533
|
It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A. |
| >cd03322 rpsA The starvation sensing protein RpsA from E | Back alignment and domain information |
|---|
Probab=83.67 E-value=32 Score=30.67 Aligned_cols=146 Identities=10% Similarity=0.013 Sum_probs=91.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+.+.|++.|=.-- .+. -+++++.-.+++.|.--.. ..++++... +.+
T Consensus 126 ~~~~~~~~a~~~~~~Gf~~~KiKv-------~~~-v~avre~~G~~~~l~vDaN----------~~w~~~~A~----~~~ 183 (361)
T cd03322 126 DIPELLEAVERHLAQGYRAIRVQL-------PKL-FEAVREKFGFEFHLLHDVH----------HRLTPNQAA----RFG 183 (361)
T ss_pred CHHHHHHHHHHHHHcCCCeEeeCH-------HHH-HHHHHhccCCCceEEEECC----------CCCCHHHHH----HHH
Confidence 456677778888889999886421 222 3344432233444433221 124454332 233
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.|. .+++.++..|-... -++.+.+|++...+. ..|=|.++...+..++....++++|+...-.-.- ...++
T Consensus 184 ~~l~--~~~l~~iEeP~~~~----d~~~~~~L~~~~~~pia~gE~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~i 257 (361)
T cd03322 184 KDVE--PYRLFWMEDPTPAE----NQEAFRLIRQHTATPLAVGEVFNSIWDWQNLIQERLIDYIRTTVSHAGGITPARKI 257 (361)
T ss_pred HHhh--hcCCCEEECCCCcc----cHHHHHHHHhcCCCCEEeccCCcCHHHHHHHHHhCCCCEEecCccccCCHHHHHHH
Confidence 3342 34666776664332 367778888887665 6677888999999998888889999976654321 12789
Q ss_pred HHHHHHhCCcEEeccc
Q 025707 198 VPLCRELGIGIVPYCP 213 (249)
Q Consensus 198 ~~~~~~~gi~v~a~sp 213 (249)
.+.|+++|+.+...+.
T Consensus 258 a~~A~~~gi~~~~h~~ 273 (361)
T cd03322 258 ADLASLYGVRTGWHGP 273 (361)
T ss_pred HHHHHHcCCeeeccCC
Confidence 9999999999987543
|
coli and its homologs are lactonizing enzymes whose putative targets are homoserine lactone (HSL)-derivative. They are part of the mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subfamily share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and catalytic residues, a partially conserved Lys-X-Lys motif and a conserved histidine-aspartate dyad. |
| >TIGR01928 menC_lowGC/arch o-succinylbenzoic acid (OSB) synthetase | Back alignment and domain information |
|---|
Probab=83.50 E-value=30 Score=30.29 Aligned_cols=153 Identities=14% Similarity=0.071 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+.+.|++.|=.-- +. ..+...-+++++.- .++-|.--.. ..++++.++ .+ +.|
T Consensus 132 ~~~~~~~~a~~~~~~Gf~~~KiKv--~~-~~d~~~v~~vr~~~-~~~~l~vDaN----------~~~~~~~a~-~~-~~l 195 (324)
T TIGR01928 132 NDEQMLKQIESLKATGYKRIKLKI--TP-QIMHQLVKLRRLRF-PQIPLVIDAN----------ESYDLQDFP-RL-KEL 195 (324)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEe--CC-chhHHHHHHHHHhC-CCCcEEEECC----------CCCCHHHHH-HH-HHH
Confidence 456677888888899999985432 11 23333444555422 2333322221 124454432 12 333
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+. .++.++..|-.. +-++.+.++++.-.+. ..|=|.++...+..++....++++|+..+-.-.- ...++
T Consensus 196 ~~-----~~~~~iEeP~~~----~~~~~~~~l~~~~~~pia~dEs~~~~~~~~~~~~~~~~dvi~~d~~~~GGit~~~~~ 266 (324)
T TIGR01928 196 DR-----YQLLYIEEPFKI----DDLSMLDELAKGTITPICLDESITSLDDARNLIELGNVKVINIKPGRLGGLTEVQKA 266 (324)
T ss_pred hh-----CCCcEEECCCCh----hHHHHHHHHHhhcCCCEeeCCCcCCHHHHHHHHHcCCCCEEEeCcchhcCHHHHHHH
Confidence 33 355666655332 3356777887765554 5577888999999999888899999876654321 12789
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+..|
T Consensus 267 ~~~A~~~gi~~~~~~~~es~ 286 (324)
T TIGR01928 267 IETCREHGAKVWIGGMLETG 286 (324)
T ss_pred HHHHHHcCCeEEEcceEccc
Confidence 99999999999887766555
|
This model describes the enzyme o-succinylbenzoic acid synthetase (menC) that is involved in one of the steps of the menaquinone biosynthesis pathway. It takes SHCHC and makes it into 2-succinylbenzoate. Included in this model are low GC gram positive bacteria and archaea. Also included in the seed and in the model are enzymes with the com-name of N-acylamino acid racemase (or the more general term, racemase / racemase family), which refers to the enzyme's industrial application as racemases, and not to its biological function as o-succinylbenzoic acid synthetase. |
| >cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF) | Back alignment and domain information |
|---|
Probab=83.27 E-value=25 Score=29.26 Aligned_cols=145 Identities=13% Similarity=0.049 Sum_probs=73.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEe--------------cccccccCCcccccC
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVAT--------------KFGFVELGFTSVIVK 105 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~t--------------K~~~~~~~~~~~~~~ 105 (249)
+.+++.+++. .|+..+..+...- .+-..+.+..+....+.+.++- +.|.... .
T Consensus 82 s~~d~~~~l~----~G~~~v~ig~~~~--~~p~~~~~i~~~~~~~~i~~~ld~k~~~~~~~~v~~~~~~~~~-------~ 148 (243)
T cd04731 82 SLEDARRLLR----AGADKVSINSAAV--ENPELIREIAKRFGSQCVVVSIDAKRRGDGGYEVYTHGGRKPT-------G 148 (243)
T ss_pred CHHHHHHHHH----cCCceEEECchhh--hChHHHHHHHHHcCCCCEEEEEEeeecCCCceEEEEcCCceec-------C
Confidence 5666666654 5887777665443 2334555555544334455443 2222110 1
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHH-HHHHHHHHHHHcCCeeEEEcCCC-CHHHHHHHhhcCCceEEe
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIE-ETIGEMKKLVEEGKIKYIGLSEA-SPDTIRRAHAVHPITAVQ 183 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~-~~~~~l~~l~~~G~ir~iGvs~~-~~~~l~~~~~~~~~~~~q 183 (249)
.+. ..+-+.++.+|+++ +.+|..+...... --++.+.++++.-.+.-|..... +++.+.++.+...++.+.
T Consensus 149 ~~~----~~~~~~l~~~G~d~---i~v~~i~~~g~~~g~~~~~i~~i~~~~~~pvia~GGi~~~~di~~~l~~~g~dgv~ 221 (243)
T cd04731 149 LDA----VEWAKEVEELGAGE---ILLTSMDRDGTKKGYDLELIRAVSSAVNIPVIASGGAGKPEHFVEAFEEGGADAAL 221 (243)
T ss_pred CCH----HHHHHHHHHCCCCE---EEEeccCCCCCCCCCCHHHHHHHHhhCCCCEEEeCCCCCHHHHHHHHHhCCCCEEE
Confidence 111 12224455667654 6666544321100 13555666666555666655543 567888877766666666
Q ss_pred eecCccccch-hhhHHHHHHHh
Q 025707 184 LEWSLWARDI-ENEIVPLCREL 204 (249)
Q Consensus 184 ~~~n~~~~~~-~~~~~~~~~~~ 204 (249)
+---++.... ..++.+.|++|
T Consensus 222 vg~al~~~~~~~~~~~~~~~~~ 243 (243)
T cd04731 222 AASIFHFGEYTIAELKEYLAER 243 (243)
T ss_pred EeHHHHcCCCCHHHHHHHHhhC
Confidence 6333333221 25566666654
|
Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and plants, or peformed by a heterodimer (HisH-glutaminase and HisF-cyclase), like in bacteria. |
| >PRK10550 tRNA-dihydrouridine synthase C; Provisional | Back alignment and domain information |
|---|
Probab=83.10 E-value=31 Score=30.17 Aligned_cols=132 Identities=12% Similarity=0.016 Sum_probs=84.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeC---CC-----CcCCC----chHHHHHHHHHcC---CCCCeEEEecccccccCCccccc
Q 025707 40 SEEDGISIIKHAFSKGITFFDT---AD-----KYGPY----TNEILLGKALKEL---PRENIQVATKFGFVELGFTSVIV 104 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dt---a~-----~Yg~g----~se~~lg~~l~~~---~r~~~~I~tK~~~~~~~~~~~~~ 104 (249)
+.++..+....+.+.|+..||- +| .||.| ..-+.+.+.++.. -.+++-|+-|+....
T Consensus 73 ~p~~~~~aA~~~~~~g~d~IdiN~GCP~~~v~~~g~Gs~Ll~~~~~~~eiv~avr~~~~~~~pVsvKiR~g~-------- 144 (312)
T PRK10550 73 YPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVTVKVRLGW-------- 144 (312)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCchHHhcCCCchHhhcCHHHHHHHHHHHHHhcCCCcceEEEEECCC--------
Confidence 5777778888888999999993 22 35543 3344555555541 122467888875422
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHH---HHHHHHHHHHcCCeeEEEcCCC-CHHHHHHHhhcCCce
Q 025707 105 KGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEE---TIGEMKKLVEEGKIKYIGLSEA-SPDTIRRAHAVHPIT 180 (249)
Q Consensus 105 ~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~---~~~~l~~l~~~G~ir~iGvs~~-~~~~l~~~~~~~~~~ 180 (249)
+ +.+. ...+-+.|+..|+ |.+.+|.......... -|+...++++.-.|.-||..+. +++..+++++....+
T Consensus 145 ~-~~~~-~~~~a~~l~~~Gv---d~i~Vh~Rt~~~~y~g~~~~~~~i~~ik~~~~iPVi~nGdI~t~~da~~~l~~~g~D 219 (312)
T PRK10550 145 D-SGER-KFEIADAVQQAGA---TELVVHGRTKEDGYRAEHINWQAIGEIRQRLTIPVIANGEIWDWQSAQQCMAITGCD 219 (312)
T ss_pred C-CchH-HHHHHHHHHhcCC---CEEEECCCCCccCCCCCcccHHHHHHHHhhcCCcEEEeCCcCCHHHHHHHHhccCCC
Confidence 0 1122 2355566777775 6677887544322211 3778888888877888888774 778888888777777
Q ss_pred EEee
Q 025707 181 AVQL 184 (249)
Q Consensus 181 ~~q~ 184 (249)
.+++
T Consensus 220 gVmi 223 (312)
T PRK10550 220 AVMI 223 (312)
T ss_pred EEEE
Confidence 7766
|
|
| >cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion | Back alignment and domain information |
|---|
Probab=82.07 E-value=15 Score=30.30 Aligned_cols=88 Identities=13% Similarity=0.054 Sum_probs=61.3
Q ss_pred eeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhHHHHHHHh
Q 025707 127 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEIVPLCREL 204 (249)
Q Consensus 127 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~~~~~~~~ 204 (249)
.++.++..|-...+ ++.+.+|.+...+. ..+=|.++...+.+++....++++|+..+..-.- ...++.+.|+++
T Consensus 120 ~~i~~iEeP~~~~d----~~~~~~L~~~~~~pIa~dEs~~~~~~~~~~~~~~~~d~~~~k~~~~GGi~~~~~i~~~a~~~ 195 (229)
T cd00308 120 YGLAWIEEPCAPDD----LEGYAALRRRTGIPIAADESVTTVDDALEALELGAVDILQIKPTRVGGLTESRRAADLAEAF 195 (229)
T ss_pred cCCCeEECCCCccC----HHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHc
Confidence 46667766644332 45566777776555 3455667788887888877889999976665321 127899999999
Q ss_pred CCcEEecccCcccc
Q 025707 205 GIGIVPYCPLGRGF 218 (249)
Q Consensus 205 gi~v~a~spl~~G~ 218 (249)
|+.++..+.+..|+
T Consensus 196 gi~~~~~~~~~s~i 209 (229)
T cd00308 196 GIRVMVHGTLESSI 209 (229)
T ss_pred CCEEeecCCCCCHH
Confidence 99999988776543
|
Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase. |
| >cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins | Back alignment and domain information |
|---|
Probab=82.06 E-value=25 Score=28.43 Aligned_cols=145 Identities=16% Similarity=0.112 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc----CCCCCeEEEecccccccCCcccccCCCHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~ 115 (249)
+++++.+++..|++.|+...|.- +..+..+++. ..++++++..=. ...+.+++.+
T Consensus 9 D~~~~~~~v~~~l~~g~~~~~i~--------~~~l~p~m~~vG~~w~~~~i~va~e~-------------~as~~~~~~l 67 (201)
T cd02070 9 DEEETVELVKKALEAGIDPQDII--------EEGLAPGMDIVGDKYEEGEIFVPELL-------------MAADAMKAGL 67 (201)
T ss_pred CHHHHHHHHHHHHHcCCCHHHHH--------HHHHHHHHHHHHHHHccCCeeHHHHH-------------HHHHHHHHHH
Confidence 78999999999999997655432 2334444433 345666654321 1234455555
Q ss_pred HHHHHHcCCCc---eeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc
Q 025707 116 EASLRRLDVEY---IDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR 191 (249)
Q Consensus 116 ~~sL~~Lg~d~---iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~ 191 (249)
......+.... ---+++..+..+.+--...=.-.-|+..|+= .++| .+.+++.+.+.+....++++-+.++....
T Consensus 68 ~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG-~~~p~~~l~~~~~~~~~d~v~lS~~~~~~ 146 (201)
T cd02070 68 DLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLG-RDVPPEEFVEAVKEHKPDILGLSALMTTT 146 (201)
T ss_pred HHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECC-CCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence 55555443321 1134555544433322222223456677764 5567 66778888888888888888887765544
Q ss_pred chh-hhHHHHHHHhCC
Q 025707 192 DIE-NEIVPLCRELGI 206 (249)
Q Consensus 192 ~~~-~~~~~~~~~~gi 206 (249)
... ..+++.+++.+.
T Consensus 147 ~~~~~~~i~~lr~~~~ 162 (201)
T cd02070 147 MGGMKEVIEALKEAGL 162 (201)
T ss_pred HHHHHHHHHHHHHCCC
Confidence 322 778888888853
|
A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases. |
| >PRK06294 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=82.05 E-value=13 Score=33.38 Aligned_cols=60 Identities=18% Similarity=0.163 Sum_probs=38.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeec-CCCC-----------CC-HH---H-HHHHHHHHHHcCCeeEEEcCCCCH
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHR-VDTS-----------VP-IE---E-TIGEMKKLVEEGKIKYIGLSEASP 167 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~-~~~~-----------~~-~~---~-~~~~l~~l~~~G~ir~iGvs~~~~ 167 (249)
.+.+.+.+.++..+ .|+.++|.++.+.- |... .+ -+ + ...+.+.|.+.|. ..+++|||..
T Consensus 167 qt~~~~~~~l~~~~-~l~~~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy-~~yeis~fa~ 243 (370)
T PRK06294 167 QSLSDFIVDLHQAI-TLPITHISLYNLTIDPHTSFYKHRKRLLPSIADEEILAEMSLAAEELLTSQGF-TRYELASYAK 243 (370)
T ss_pred CCHHHHHHHHHHHH-ccCCCeEEEeeeEecCCChHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCC-CeeeeeeeeC
Confidence 57888888888776 48999999998853 3210 01 11 1 2234566777787 4578888764
|
|
| >PRK07379 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=81.86 E-value=12 Score=33.85 Aligned_cols=60 Identities=18% Similarity=0.057 Sum_probs=31.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeec-CCCC------------CCHHH---H-HHHHHHHHHcCCeeEEEcCCCCH
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHR-VDTS------------VPIEE---T-IGEMKKLVEEGKIKYIGLSEASP 167 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~-~~~~------------~~~~~---~-~~~l~~l~~~G~ir~iGvs~~~~ 167 (249)
.+.+.+++.++..+ +|+.++|.++.+.- |... .+.++ . ..+.+.|.+.|.. .+++|||..
T Consensus 179 qt~e~~~~tl~~~~-~l~p~~is~y~L~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~Gy~-~yeisnfa~ 255 (400)
T PRK07379 179 QTLEDWQASLEAAI-ALNPTHLSCYDLVLEPGTAFGKQYQPGKAPLPSDETTAAMYRLAQEILTQAGYE-HYEISNYAK 255 (400)
T ss_pred CCHHHHHHHHHHHH-cCCCCEEEEecceecCCchhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHcCCc-eeeeeheEC
Confidence 35666666666544 36777777776642 2110 01111 1 2345556666764 567777753
|
|
| >PRK08392 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=81.69 E-value=27 Score=28.54 Aligned_cols=151 Identities=17% Similarity=0.161 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc---C-CCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE---L-PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~---~-~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
....+.++.|.+.|++.|=.+.+.... ....+-..+++ . .+.++.| ..|... +..+.. .+..++
T Consensus 14 ~~~~e~v~~A~~~Gl~~i~iTdH~~~~-~~~~~~~y~~~i~~l~~~~~i~i--l~GiE~--------~~~~~~-~~~~~~ 81 (215)
T PRK08392 14 GSVRDNIAEAERKGLRLVGISDHIHYF-TPSKFNAYINEIRQWGEESEIVV--LAGIEA--------NITPNG-VDITDD 81 (215)
T ss_pred CCHHHHHHHHHHcCCCEEEEccCCCcc-chhhHHHHHHHHHHHhhccCceE--EEeEEe--------eecCCc-chhHHH
Confidence 346788999999999999766654210 11112222211 1 1223322 222211 011111 223334
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC--------CHHHHHHHhhc---CCceEEeeec
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA--------SPDTIRRAHAV---HPITAVQLEW 186 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~--------~~~~l~~~~~~---~~~~~~q~~~ 186 (249)
.+++ .|++ +..+|........++.++.+.++.+.+.+.-+|=-.. ..+.+.++++. .. +.++.
T Consensus 82 ~~~~--~D~v-I~SvH~~~~~~~~~~Y~~~~~~~~~~~~~dvlgH~d~~~~~~~~~~~~~~~~i~~~~~~~g---~~lEi 155 (215)
T PRK08392 82 FAKK--LDYV-IASVHEWFGRPEHHEYIELVKLALMDENVDIIGHFGNSFPYIGYPSEEELKEILDLAEAYG---KAFEI 155 (215)
T ss_pred HHhh--CCEE-EEEeecCcCCcHHHHHHHHHHHHHhcCCCCEEeCCCccccCCCCchHHHHHHHHHHHHHhC---CEEEE
Confidence 4443 4665 6677854333345677888888888887666654221 11232322222 11 11222
Q ss_pred CccccchhhhHHHHHHHhCCcEEe
Q 025707 187 SLWARDIENEIVPLCRELGIGIVP 210 (249)
Q Consensus 187 n~~~~~~~~~~~~~~~~~gi~v~a 210 (249)
|-..+.+...+++.|++.|+.++.
T Consensus 156 Nt~~~~p~~~~l~~~~~~G~~~~i 179 (215)
T PRK08392 156 SSRYRVPDLEFIRECIKRGIKLTF 179 (215)
T ss_pred eCCCCCCCHHHHHHHHHcCCEEEE
Confidence 221222236789999999987653
|
|
| >PRK00164 moaA molybdenum cofactor biosynthesis protein A; Reviewed | Back alignment and domain information |
|---|
Probab=81.41 E-value=36 Score=29.74 Aligned_cols=153 Identities=14% Similarity=0.130 Sum_probs=86.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHH---HHcC-CCCCeEEEecccccccCCcccccCCCHHHHHH
Q 025707 38 PLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKA---LKEL-PRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (249)
Q Consensus 38 ~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~---l~~~-~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~ 113 (249)
..+.++..++++.+.+.|++.+.-+. |...-..-+-+. ++.. .-.++.|+|-... +.+
T Consensus 48 ~ls~eei~~~i~~~~~~gi~~I~~tG--GEPll~~~l~~li~~i~~~~~~~~i~itTNG~l----------------l~~ 109 (331)
T PRK00164 48 LLSLEEIERLVRAFVALGVRKVRLTG--GEPLLRKDLEDIIAALAALPGIRDLALTTNGYL----------------LAR 109 (331)
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEEC--CCCcCccCHHHHHHHHHhcCCCceEEEEcCchh----------------HHH
Confidence 36789999999999999998887543 211111112223 3322 1235666665321 112
Q ss_pred HHHHHHHHcCCCceeEEEeecCCC--------CCCHHHHHHHHHHHHHcCC----eeEEEcCCCCHHHHHHHhhc---CC
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDT--------SVPIEETIGEMKKLVEEGK----IKYIGLSEASPDTIRRAHAV---HP 178 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~--------~~~~~~~~~~l~~l~~~G~----ir~iGvs~~~~~~l~~~~~~---~~ 178 (249)
.+ ..|...|++.+- +-+|..++ ...+++++++++.+++.|. |..+.+...+.+.+.++.+. .+
T Consensus 110 ~~-~~L~~agl~~i~-ISlds~~~e~~~~i~~~~~~~~vl~~i~~~~~~g~~~v~i~~vv~~g~n~~ei~~l~~~~~~~g 187 (331)
T PRK00164 110 RA-AALKDAGLDRVN-VSLDSLDPERFKAITGRDRLDQVLAGIDAALAAGLTPVKVNAVLMKGVNDDEIPDLLEWAKDRG 187 (331)
T ss_pred HH-HHHHHcCCCEEE-EEeccCCHHHhccCCCCCCHHHHHHHHHHHHHCCCCcEEEEEEEECCCCHHHHHHHHHHHHhCC
Confidence 22 345556766553 44454433 2357899999999999885 33555545565565555443 44
Q ss_pred ceEEeeecCccccc---------hhhhHHHHHHHhCCcEEe
Q 025707 179 ITAVQLEWSLWARD---------IENEIVPLCRELGIGIVP 210 (249)
Q Consensus 179 ~~~~q~~~n~~~~~---------~~~~~~~~~~~~gi~v~a 210 (249)
+.+.-++|.++... ...++++.++++|+.+..
T Consensus 188 v~v~~ie~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 228 (331)
T PRK00164 188 IQLRFIELMPTGEGNEWFRKHHLSGAEIRARLAERGWTLQP 228 (331)
T ss_pred CeEEEEEeeECCCCcchhhhcCCCHHHHHHHHHhccCcccc
Confidence 55544555543321 125688888888765443
|
|
| >PRK08446 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=81.39 E-value=25 Score=31.18 Aligned_cols=60 Identities=15% Similarity=0.077 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeec-CCCC--------CCHHHH-HHHHHHHHHcCCeeEEEcCCCCH
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHR-VDTS--------VPIEET-IGEMKKLVEEGKIKYIGLSEASP 167 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~-~~~~--------~~~~~~-~~~l~~l~~~G~ir~iGvs~~~~ 167 (249)
.+.+.+++.++..+ +++.+++.++.+.- |... .+-++. ..+.+.|.+.|. ..+++|||..
T Consensus 162 qt~~~~~~~l~~~~-~l~~~~is~y~L~~~~gT~l~~~~~~~~~~~~~~~~~~~~l~~~Gy-~~yeis~fa~ 231 (350)
T PRK08446 162 DNKKLLKEELKLAK-ELPINHLSAYSLTIEENTPFFEKNHKKKDDENLAKFFIEQLEELGF-KQYEISNFGK 231 (350)
T ss_pred CCHHHHHHHHHHHH-hcCCCEEEeccceecCCChhHHhhhcCCCHHHHHHHHHHHHHHCCC-cEEEeehhhC
Confidence 46777877776644 58888888887753 2211 111222 333556667776 4688888764
|
|
| >COG1140 NarY Nitrate reductase beta subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=81.06 E-value=0.83 Score=40.58 Aligned_cols=54 Identities=17% Similarity=0.327 Sum_probs=37.7
Q ss_pred cCCeeEEEcCCCCHHHHHHHhhcC-CceEEeeecCccccchhhhHHHHHHHhCCc
Q 025707 154 EGKIKYIGLSEASPDTIRRAHAVH-PITAVQLEWSLWARDIENEIVPLCRELGIG 207 (249)
Q Consensus 154 ~G~ir~iGvs~~~~~~l~~~~~~~-~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~ 207 (249)
-|+||++||--++.+.+.++.... .-+..+.+..++.......+++.+++.||+
T Consensus 263 VGriRYlGVlLYDaDrv~eaAs~~~e~dly~~Q~~ifLDP~DP~Vi~~A~k~Gip 317 (513)
T COG1140 263 VGRIRYLGVLLYDADRVEEAASTENEKDLYERQLDVFLDPHDPAVIEQARKDGIP 317 (513)
T ss_pred hcceeeeeeeeecHHHHHHhhcCccHHHHHHHHHhhhcCCCCHHHHHHHHHcCCc
Confidence 399999999999999999887652 223333333443322346788888888886
|
|
| >PRK07945 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=80.32 E-value=41 Score=29.72 Aligned_cols=154 Identities=14% Similarity=0.101 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCC-----CchHHHHHHHHHcC---C--CCCeEEEecccccccCCcccccCCCHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGP-----YTNEILLGKALKEL---P--RENIQVATKFGFVELGFTSVIVKGTPEY 110 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~-----g~se~~lg~~l~~~---~--r~~~~I~tK~~~~~~~~~~~~~~~s~~~ 110 (249)
.....+++++|.+.|+..+=.+.+... +-+...+-+.+..+ + -.++-| +.|.... ..++.+.+.
T Consensus 110 ~~~~ee~v~~Ai~~Gl~~i~~TDH~p~~~~~~~~~~~~l~~y~~~i~~l~~ky~~I~I--l~GiE~d----~~~~g~~~~ 183 (335)
T PRK07945 110 GSPIEEMARTAAALGHEYCALTDHSPRLTVANGLSAERLRKQLDVVAELNEELAPFRI--LTGIEVD----ILDDGSLDQ 183 (335)
T ss_pred CCCHHHHHHHHHHCCCCEEEEeCCCCCccCCCCCCHHHHHHHHHHHHHHHHhcCCceE--EEEeEec----ccCCCCcch
Confidence 345779999999999999876655421 11222222222221 1 112222 2222110 001112222
Q ss_pred HHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC---------------CCHHHHHHHhh
Q 025707 111 VRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE---------------ASPDTIRRAHA 175 (249)
Q Consensus 111 i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~---------------~~~~~l~~~~~ 175 (249)
.++.|+. .||+ +..+|+... .+.++..+.+.++.+.+.+..+|=-+ +..+.+.+++.
T Consensus 184 ----~~~~l~~--~D~v-IgSvH~~~~-~~~~~~~~~l~~ai~~~~~dvlgH~D~~~~~~~~~~~~~~~~~~~~i~~a~~ 255 (335)
T PRK07945 184 ----EPELLDR--LDVV-VASVHSKLR-MDAAAMTRRMLAAVANPHTDVLGHCTGRLVTGNRGTRPESKFDAEAVFAACR 255 (335)
T ss_pred ----hHHHHHh--CCEE-EEEeecCCC-CCHHHHHHHHHHHhcCCCCeEEecCchhhhccccCCCChhhcCHHHHHHHHH
Confidence 2333443 4665 667787643 33466678888888888877777321 12223333322
Q ss_pred cCCceEEeeecCccccchhhhHHHHHHHhCCcEE
Q 025707 176 VHPITAVQLEWSLWARDIENEIVPLCRELGIGIV 209 (249)
Q Consensus 176 ~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~ 209 (249)
.... .+.++.+.....+...+++.|++.|+.++
T Consensus 256 e~g~-~lEINt~~~r~~P~~~il~~a~e~G~~vt 288 (335)
T PRK07945 256 EHGT-AVEINSRPERRDPPTRLLRLALDAGCLFS 288 (335)
T ss_pred HhCC-EEEEeCCCCCCCChHHHHHHHHHcCCeEE
Confidence 2211 22333333323334679999999998865
|
|
| >PRK13803 bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta; Provisional | Back alignment and domain information |
|---|
Probab=80.17 E-value=13 Score=35.80 Aligned_cols=66 Identities=14% Similarity=0.107 Sum_probs=48.3
Q ss_pred HHcCCCceeEEEeecCCCCCCHHH-HHHHHHHHHHcCCeeEEEcC-CCCHHHHHHHhhcCCceEEeeec
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEE-TIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~-~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
..+|.|++-+++..........+. +-+..+.+ ....++.|||- |-+++.+.+..+...++++|+.-
T Consensus 20 ~~~gaD~iGfIf~~~SpR~V~~~~~a~~i~~~l-~~~~v~~VgVfv~~~~~~i~~~~~~~~ld~vQLHG 87 (610)
T PRK13803 20 VDMLPDFIGFIFYEKSPRFVGNKFLAPNLEKAI-RKAGGRPVGVFVNESAKAMLKFSKKNGIDFVQLHG 87 (610)
T ss_pred HHcCCCEEEEEecCCCCCCCCHHHHHHHHHHhC-CCCCCCEEEEEeCCCHHHHHHHHHhcCCCEEEECC
Confidence 458999999987776555566666 33333333 22357789995 88889999999889999999964
|
|
| >PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional | Back alignment and domain information |
|---|
Probab=80.06 E-value=14 Score=31.91 Aligned_cols=102 Identities=11% Similarity=0.043 Sum_probs=61.3
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeee
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
++.+. +..+-+.|.++|+++|++-.+++|.......+.++.+..+.+...++...+. .+...++.+.+. .++.+.+.
T Consensus 23 ~s~e~-k~~ia~~L~~~Gv~~IEvgsf~~p~~~p~~~d~~e~~~~l~~~~~~~~~~l~-~~~~~ie~A~~~-g~~~v~i~ 99 (287)
T PRK05692 23 IPTAD-KIALIDRLSAAGLSYIEVASFVSPKWVPQMADAAEVMAGIQRRPGVTYAALT-PNLKGLEAALAA-GADEVAVF 99 (287)
T ss_pred cCHHH-HHHHHHHHHHcCCCEEEeCCCcCcccccccccHHHHHHhhhccCCCeEEEEe-cCHHHHHHHHHc-CCCEEEEE
Confidence 34443 3456667999999999998666554332233345666666554446666655 578888888776 23333332
Q ss_pred --cCccc------cc------hhhhHHHHHHHhCCcEEe
Q 025707 186 --WSLWA------RD------IENEIVPLCRELGIGIVP 210 (249)
Q Consensus 186 --~n~~~------~~------~~~~~~~~~~~~gi~v~a 210 (249)
.|..+ .. .....+++++++|+.+.+
T Consensus 100 ~~~s~~~~~~n~~~~~~e~l~~~~~~v~~ak~~g~~v~~ 138 (287)
T PRK05692 100 ASASEAFSQKNINCSIAESLERFEPVAEAAKQAGVRVRG 138 (287)
T ss_pred EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 22111 11 015789999999998864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 249 | ||||
| 3v0u_A | 338 | Crystal Structure Of Perakine Reductase, Founder Me | 6e-97 | ||
| 3v0t_A | 337 | Crystal Structure Of Perakine Reductase, Founder Me | 7e-97 | ||
| 3uyi_A | 337 | Crystal Structure Of Perakine Reductase, Founder Me | 1e-96 | ||
| 3v0s_A | 337 | Crystal Structure Of Perakine Reductase, Founder Me | 4e-94 | ||
| 1pyf_A | 312 | Structure Of Nadph-Dependent Family 11 Aldo-Keto Re | 2e-30 | ||
| 1ynp_A | 317 | Aldo-keto Reductase Akr11c1 From Bacillus Haloduran | 7e-27 | ||
| 1pz1_A | 333 | Structure Of Nadph-Dependent Family 11 Aldo-Keto Re | 4e-25 | ||
| 3n2t_A | 348 | Structure Of The Glycerol Dehydrogenase Akr11b4 Fro | 5e-25 | ||
| 4aub_A | 366 | The Complex Structure Of The Bacterial Aldo-Keto Re | 2e-21 | ||
| 3n6q_A | 346 | Crystal Structure Of Yghz From E. Coli Length = 346 | 2e-21 | ||
| 3erp_A | 353 | Structure Of Idp01002, A Putative Oxidoreductase Fr | 2e-21 | ||
| 3lut_A | 367 | A Structural Model For The Full-Length Shaker Potas | 1e-18 | ||
| 1qrq_A | 325 | Structure Of A Voltage-Dependent K+ Channel Beta Su | 2e-18 | ||
| 1zsx_A | 347 | Crystal Structure Of Human Potassium Channel Kv Bet | 2e-18 | ||
| 1exb_A | 332 | Structure Of The Cytoplasmic Beta Subunit-T1 Assemb | 2e-18 | ||
| 2a79_A | 333 | Mammalian Shaker Kv1.2 Potassium Channel- Beta Subu | 2e-18 | ||
| 3eau_A | 327 | Voltage-Dependent K+ Channel Beta Subunit In Comple | 2e-18 | ||
| 3eb4_A | 327 | Voltage-Dependent K+ Channel Beta Subunit (I211r) I | 2e-18 | ||
| 3eb3_A | 327 | Voltage-Dependent K+ Channel Beta Subunit (W121a) I | 3e-18 | ||
| 2bp1_B | 360 | Structure Of The Aflatoxin Aldehyde Reductase In Co | 6e-12 | ||
| 2c91_A | 338 | Mouse Succinic Semialdehyde Reductase, Akr7a5 Lengt | 6e-12 | ||
| 2clp_A | 347 | Crystal Structure Of Human Aflatoxin B1 Aldehyde Re | 7e-12 | ||
| 1og6_A | 298 | Ydhf, An Aldo-keto Reductase From E.coli Complexed | 1e-11 | ||
| 4gac_A | 324 | High Resolution Structure Of Mouse Aldehyde Reducta | 7e-11 | ||
| 3up8_A | 298 | Crystal Structure Of A Putative 2,5-Diketo-D-Glucon | 7e-11 | ||
| 1ur3_M | 319 | Crystal Structure Of The Apo Form Of The E.Coli Ydh | 8e-11 | ||
| 3o0k_A | 283 | Crystal Structure Of AldoKETO REDUCTASE FROM BRUCEL | 1e-10 | ||
| 1gve_A | 327 | Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Live | 5e-10 | ||
| 1lqa_A | 346 | Tas Protein From Escherichia Coli In Complex With N | 2e-09 | ||
| 1qwk_A | 317 | Structural Genomics Of Caenorhabditis Elegans: Hypo | 2e-09 | ||
| 3cv7_A | 325 | Crystal Structure Of Porcine Aldehyde Reductase Ter | 2e-09 | ||
| 2alr_A | 324 | Aldehyde Reductase Length = 324 | 5e-09 | ||
| 1ae4_A | 325 | Aldehyde Reductase Complexed With Cofactor And Inhi | 5e-09 | ||
| 1cwn_A | 324 | Crystal Structure Of Porcine Aldehyde Reductase Hol | 5e-09 | ||
| 1vp5_A | 298 | Crystal Structure Of 2,5-diketo-d-gluconic Acid Red | 7e-09 | ||
| 1hqt_A | 326 | The Crystal Structure Of An Aldehyde Reductase Y50f | 7e-09 | ||
| 2wzm_A | 283 | Crystal Structure Of A Mycobacterium Aldo-Keto Redu | 2e-08 | ||
| 4fzi_A | 290 | Crystal Structure Of Prostaglandin F Synthase From | 2e-08 | ||
| 3krb_A | 334 | Structure Of Aldose Reductase From Giardia Lamblia | 6e-08 | ||
| 2bgq_A | 344 | Apo Aldose Reductase From Barley Length = 344 | 2e-07 | ||
| 4f40_A | 288 | X-Ray Crystal Structure Of Apo Prostaglandin F Synt | 8e-07 | ||
| 1vbj_A | 281 | The Crystal Structure Of Prostaglandin F Synthase F | 3e-06 | ||
| 1z9a_A | 321 | Crystal Structure Of The Asn-309 To Asp Mutant Of C | 6e-06 | ||
| 1sm9_A | 322 | Crystal Structure Of An Engineered K274rn276d Doubl | 6e-06 | ||
| 1ye4_A | 322 | Crystal Structure Of The Lys-274 To Arg Mutant Of C | 6e-06 | ||
| 1jez_A | 322 | The Structure Of Xylose Reductase, A Dimeric Aldo-K | 6e-06 | ||
| 1r38_A | 322 | Crystal Structure Of H114a Mutant Of Candida Tenuis | 2e-05 | ||
| 3h7r_A | 331 | Crystal Structure Of The Plant Stress-Response Enzy | 2e-05 | ||
| 1mzr_A | 296 | Structure Of Dkga From E.Coli At 2.13 A Resolution | 2e-04 |
| >pdb|3V0U|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 338 | Back alignment and structure |
|
| >pdb|3V0T|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 | Back alignment and structure |
|
| >pdb|3UYI|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 | Back alignment and structure |
|
| >pdb|3V0S|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 | Back alignment and structure |
|
| >pdb|1PYF|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase Akr11a(Apo) Length = 312 | Back alignment and structure |
|
| >pdb|1YNP|A Chain A, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo Form) Length = 317 | Back alignment and structure |
|
| >pdb|1PZ1|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase Akr11b(Holo) Length = 333 | Back alignment and structure |
|
| >pdb|3N2T|A Chain A, Structure Of The Glycerol Dehydrogenase Akr11b4 From Gluconobacter Oxydans Length = 348 | Back alignment and structure |
|
| >pdb|4AUB|A Chain A, The Complex Structure Of The Bacterial Aldo-Keto Reductase Akr14a1 With Nadp And Citrate Length = 366 | Back alignment and structure |
|
| >pdb|3N6Q|A Chain A, Crystal Structure Of Yghz From E. Coli Length = 346 | Back alignment and structure |
|
| >pdb|3ERP|A Chain A, Structure Of Idp01002, A Putative Oxidoreductase From And Essential Gene Of Salmonella Typhimurium Length = 353 | Back alignment and structure |
|
| >pdb|3LUT|A Chain A, A Structural Model For The Full-Length Shaker Potassium Channel Kv1.2 Length = 367 | Back alignment and structure |
|
| >pdb|1QRQ|A Chain A, Structure Of A Voltage-Dependent K+ Channel Beta Subunit Length = 325 | Back alignment and structure |
|
| >pdb|1ZSX|A Chain A, Crystal Structure Of Human Potassium Channel Kv Beta-Subunit (Kcnab2) Length = 347 | Back alignment and structure |
|
| >pdb|1EXB|A Chain A, Structure Of The Cytoplasmic Beta Subunit-T1 Assembly Of Voltage-Dependent K Channels Length = 332 | Back alignment and structure |
|
| >pdb|2A79|A Chain A, Mammalian Shaker Kv1.2 Potassium Channel- Beta Subunit Complex Length = 333 | Back alignment and structure |
|
| >pdb|3EAU|A Chain A, Voltage-Dependent K+ Channel Beta Subunit In Complex With Cortisone Length = 327 | Back alignment and structure |
|
| >pdb|3EB4|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (I211r) In Complex With Cortisone Length = 327 | Back alignment and structure |
|
| >pdb|3EB3|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (W121a) In Complex With Cortisone Length = 327 | Back alignment and structure |
|
| >pdb|2C91|A Chain A, Mouse Succinic Semialdehyde Reductase, Akr7a5 Length = 338 | Back alignment and structure |
|
| >pdb|2CLP|A Chain A, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase Member 3 Length = 347 | Back alignment and structure |
|
| >pdb|1OG6|A Chain A, Ydhf, An Aldo-keto Reductase From E.coli Complexed With Nadph Length = 298 | Back alignment and structure |
|
| >pdb|4GAC|A Chain A, High Resolution Structure Of Mouse Aldehyde Reductase (akr1a4) In Its Apo-form Length = 324 | Back alignment and structure |
|
| >pdb|3UP8|A Chain A, Crystal Structure Of A Putative 2,5-Diketo-D-Gluconic Acid Reductase B Length = 298 | Back alignment and structure |
|
| >pdb|1UR3|M Chain M, Crystal Structure Of The Apo Form Of The E.Coli Ydhf Protein Length = 319 | Back alignment and structure |
|
| >pdb|3O0K|A Chain A, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA MELITENSIS Length = 283 | Back alignment and structure |
|
| >pdb|1GVE|A Chain A, Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Liver Length = 327 | Back alignment and structure |
|
| >pdb|1LQA|A Chain A, Tas Protein From Escherichia Coli In Complex With Nadph Length = 346 | Back alignment and structure |
|
| >pdb|1QWK|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Hypothetical 35.2 Kda Protein (Aldose Reductase Family Member) Length = 317 | Back alignment and structure |
|
| >pdb|3CV7|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Ternary Complex Length = 325 | Back alignment and structure |
|
| >pdb|2ALR|A Chain A, Aldehyde Reductase Length = 324 | Back alignment and structure |
|
| >pdb|1AE4|A Chain A, Aldehyde Reductase Complexed With Cofactor And Inhibitor, Alpha Carbon Atoms Only Length = 325 | Back alignment and structure |
|
| >pdb|1CWN|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Holoenzyme Length = 324 | Back alignment and structure |
|
| >pdb|1VP5|A Chain A, Crystal Structure Of 2,5-diketo-d-gluconic Acid Reductase (tm1009) From Thermotoga Maritima At 2.40 A Resolution Length = 298 | Back alignment and structure |
|
| >pdb|1HQT|A Chain A, The Crystal Structure Of An Aldehyde Reductase Y50f Mutant- Nadp Complex And Its Implications For Substrate Binding Length = 326 | Back alignment and structure |
|
| >pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase In Its Apo And Liganded Form Length = 283 | Back alignment and structure |
|
| >pdb|4FZI|A Chain A, Crystal Structure Of Prostaglandin F Synthase From Trypanosoma Cruzi Length = 290 | Back alignment and structure |
|
| >pdb|3KRB|A Chain A, Structure Of Aldose Reductase From Giardia Lamblia At 1.75a Resolution Length = 334 | Back alignment and structure |
|
| >pdb|2BGQ|A Chain A, Apo Aldose Reductase From Barley Length = 344 | Back alignment and structure |
|
| >pdb|4F40|A Chain A, X-Ray Crystal Structure Of Apo Prostaglandin F Synthase From Leishmania Major Friedlin Length = 288 | Back alignment and structure |
|
| >pdb|1VBJ|A Chain A, The Crystal Structure Of Prostaglandin F Synthase From Trypanosoma Brucei Length = 281 | Back alignment and structure |
|
| >pdb|1Z9A|A Chain A, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida Tenuis Xylose Reductase (Akr2b5) Bound To Nad+ Length = 321 | Back alignment and structure |
|
| >pdb|1SM9|A Chain A, Crystal Structure Of An Engineered K274rn276d Double Mutant Of Xylose Reductase From Candida Tenuis Optimized To Utilize Nad Length = 322 | Back alignment and structure |
|
| >pdb|1YE4|A Chain A, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida Tenuis Xylose Reductase (Akr2b5) Bound To Nad+ Length = 322 | Back alignment and structure |
|
| >pdb|1JEZ|A Chain A, The Structure Of Xylose Reductase, A Dimeric Aldo-Keto Reductase From Candida Tenuis Length = 322 | Back alignment and structure |
|
| >pdb|1R38|A Chain A, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose Reductase Length = 322 | Back alignment and structure |
|
| >pdb|3H7R|A Chain A, Crystal Structure Of The Plant Stress-Response Enzyme Akr4c8 Length = 331 | Back alignment and structure |
|
| >pdb|1MZR|A Chain A, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved By Molecular Replacement Length = 296 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 249 | |||
| 1pyf_A | 312 | IOLS protein; beta-alpha barrel, aldo-keto reducta | 1e-136 | |
| 3n2t_A | 348 | Putative oxidoreductase; aldo/keto reductase super | 1e-136 | |
| 1pz1_A | 333 | GSP69, general stress protein 69; beta-alpha barre | 1e-120 | |
| 3v0s_A | 337 | Perakine reductase; AKR superfamily, oxidoreductas | 1e-113 | |
| 1ynp_A | 317 | Oxidoreductase, AKR11C1; aldo-keto reductase, NADP | 1e-107 | |
| 1ur3_M | 319 | Hypothetical oxidoreductase YDHF; NADP binding, al | 1e-102 | |
| 2bp1_A | 360 | Aflatoxin B1 aldehyde reductase member 2; oxidored | 6e-68 | |
| 1gve_A | 327 | Aflatoxin B1 aldehyde reductase member 3; oxidored | 2e-65 | |
| 3erp_A | 353 | Putative oxidoreductase; funded by the national in | 3e-63 | |
| 3eau_A | 327 | Voltage-gated potassium channel subunit beta-2; kv | 5e-61 | |
| 3n6q_A | 346 | YGHZ aldo-keto reductase; TIM barrel, oxidoreducta | 4e-60 | |
| 3lut_A | 367 | Voltage-gated potassium channel subunit beta-2; vo | 2e-59 | |
| 1lqa_A | 346 | TAS protein; TIM barrel, structure 2 function proj | 8e-48 | |
| 1qwk_A | 317 | Aldose reductase, aldo-keto reductase family 1 mem | 6e-24 | |
| 3up8_A | 298 | Putative 2,5-diketo-D-gluconic acid reductase B; n | 2e-23 | |
| 3buv_A | 326 | 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reduc | 1e-22 | |
| 1s1p_A | 331 | Aldo-keto reductase family 1 member C3; TIM-barrel | 6e-22 | |
| 1us0_A | 316 | Aldose reductase; oxidoreductase, NADP, IDD594; HE | 3e-21 | |
| 2bgs_A | 344 | Aldose reductase; holoenzyme, aldo/keto reductase, | 3e-21 | |
| 2ao0_A | 324 | Aldehyde dehydrogenase; TIM barrel, aldo-keto redu | 4e-21 | |
| 1zgd_A | 312 | Chalcone reductase; polyketide, deoxychalcone, iso | 6e-21 | |
| 2wzm_A | 283 | Aldo-keto reductase; oxidoreductase; HET: NA7; 1.6 | 7e-21 | |
| 1mi3_A | 322 | Xylose reductase, XR; aldo-keto reductase, beta-al | 8e-21 | |
| 4f40_A | 288 | Prostaglandin F2-alpha synthase/D-arabinose dehyd; | 1e-20 | |
| 1afs_A | 323 | 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; | 1e-20 | |
| 1vp5_A | 298 | 2,5-diketo-D-gluconic acid reductase; TM1009, stru | 2e-20 | |
| 3o3r_A | 316 | Aldo-keto reductase family 1, member B7; aldose re | 2e-20 | |
| 3h7u_A | 335 | Aldo-keto reductase; stress response, NADP, drough | 2e-20 | |
| 3o0k_A | 283 | Aldo/keto reductase; ssgcid, ALS collaborative cry | 2e-20 | |
| 3krb_A | 334 | Aldose reductase; ssgcid, SBRI, emerald biostructu | 3e-20 | |
| 1hw6_A | 278 | 2,5-diketo-D-gluconic acid reductase; aldo-keto re | 7e-20 | |
| 1vbj_A | 281 | Prostaglandin F synthase; TIM barrel, oxidoreducta | 8e-20 | |
| 3b3e_A | 310 | YVGN protein; aldo-keto reductase, oxidoreductase; | 3e-19 | |
| 4gie_A | 290 | Prostaglandin F synthase; structural genomics, nia | 3e-19 | |
| 3h7r_A | 331 | Aldo-keto reductase; stress response, NADP, drough | 4e-19 | |
| 3f7j_A | 276 | YVGN protein; aldo-keto reductase, oxidoreductase; | 6e-19 | |
| 1mzr_A | 296 | 2,5-diketo-D-gluconate reductase A; alpha/beta-bar | 3e-18 | |
| 3ln3_A | 324 | Dihydrodiol dehydrogenase; putative reductase, str | 1e-14 |
| >1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A* Length = 312 | Back alignment and structure |
|---|
Score = 386 bits (993), Expect = e-136
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 2/213 (0%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSG-CYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
+ KLG L+V +G G ++ G L+EE G +++ A G+T DTA YG
Sbjct: 3 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGR 62
Query: 70 NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
+E L+G+ L+E RE++ +ATK + G + +P++++ + SL+RL+ +YIDL
Sbjct: 63 SEELIGEVLREFNREDVVIATKAAHRKQG-NDFVFDNSPDFLKKSVDESLKRLNTDYIDL 121
Query: 130 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLW 189
+Y H D P +E + + ++ + GKI+ IG+S S + ++ A+ + +Q E++L
Sbjct: 122 FYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLL 181
Query: 190 ARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
R+ E P +E I +PY PL G GK
Sbjct: 182 NREAEKTFFPYTKEHNISFIPYFPLVSGLLAGK 214
|
| >3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} Length = 348 | Back alignment and structure |
|---|
Score = 386 bits (994), Expect = e-136
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 5/226 (2%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
+ + +++ +S++ G ++ G +++G+ I A +GI D
Sbjct: 11 VPRGSHMASDTIRIPGIDTPLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLID 70
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFV----ELGFTSVIVKGTPEYVRSCCE 116
TA YG +E ++G+AL E VATK G + V P +R E
Sbjct: 71 TAPVYGFGHSEEIVGRALAEK-PNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVE 129
Query: 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV 176
SLRRL VE IDL H D PI+E+ E++KL ++GKI+ +G+S SP+ + V
Sbjct: 130 DSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREV 189
Query: 177 HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
P+ +Q +L+ R IE +I+P + ++ Y L RG GK
Sbjct: 190 APLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGK 235
|
| >1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1 Length = 333 | Back alignment and structure |
|---|
Score = 344 bits (884), Expect = e-120
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 2/212 (0%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
+ G+E S++G G ++ G E+ I I+ A +GIT DTA YG +E
Sbjct: 4 TSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSE 63
Query: 72 ILLGKALKEL-PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLY 130
++GKA+KE R+ + +ATK + + E SL+RL +YIDLY
Sbjct: 64 EIVGKAIKEYMKRDQVILATKTALD-WKNNQLFRHANRARIVEEVENSLKRLQTDYIDLY 122
Query: 131 YQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWA 190
H D VPIEET MK+L + GKI+ IG+S S + + AV P+ +Q ++L+
Sbjct: 123 QVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFE 182
Query: 191 RDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
R++E ++P ++ I + Y L RG GK
Sbjct: 183 REMEESVLPYAKDNKITTLLYGSLCRGLLTGK 214
|
| >3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A* Length = 337 | Back alignment and structure |
|---|
Score = 327 bits (840), Expect = e-113
Identities = 164/226 (72%), Positives = 193/226 (85%), Gaps = 1/226 (0%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
+PRVKLGTQGLEVSKLG+GCM LSG YN L EE GI++IK AF+ GITFFDT+D YG
Sbjct: 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGEN 60
Query: 69 -TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
+NE LLGKALK+LPRE IQV TKFG E+GF+ V GTP+YVRSCCEASL+RLDV+YI
Sbjct: 61 GSNEELLGKALKQLPREXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYI 120
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DL+Y HR+DT+VPIE T+GE+ LVEEGKI Y+GLSEASPDTIRRAHAVHP+TA+Q+E+S
Sbjct: 121 DLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAVHPVTALQIEYS 180
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSF 233
LW RDIE+EIVPLCR+LGIGIVPY P+GRG F GKA+ ES+P +S
Sbjct: 181 LWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLPENSV 226
|
| >1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A* Length = 317 | Back alignment and structure |
|---|
Score = 310 bits (797), Expect = e-107
Identities = 76/212 (35%), Positives = 109/212 (51%), Gaps = 9/212 (4%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
+LGT L VS+LG+GCMSL E I+ GI + DTAD Y NE
Sbjct: 24 RQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNE 77
Query: 72 ILLGKALKELPRENIQVATKFGFV-ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLY 130
+GKALK R++I +ATK G E G + Y++ + SLRRL +YIDLY
Sbjct: 78 QFVGKALKG-RRQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLY 136
Query: 131 YQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWA 190
H PI+ETI ++L +EG I+Y G+S P+ I+ I ++ +++S+
Sbjct: 137 QLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSNIVSIMMQYSILD 196
Query: 191 RDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
R E E PL +E G+ +V P+ RG +
Sbjct: 197 RRPE-EWFPLIQEHGVSVVVRGPVARGLLSRR 227
|
| >1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A* Length = 319 | Back alignment and structure |
|---|
Score = 298 bits (765), Expect = e-102
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 11/219 (5%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN 70
R+ + QG E S+ G L +S +S I+ G+T D AD YG Y
Sbjct: 25 RITIAPQGPEFSRFVMGYWRLMD---WNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQC 81
Query: 71 EILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG---TPEYVRSCCEASLRRLDVE 125
E G+ALK P RE +++ +K G ++ +++ E SL L +
Sbjct: 82 EAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATD 141
Query: 126 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQ 183
++DL HR D + +E K L + GK+++ G+S +P + + Q
Sbjct: 142 HLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQ 201
Query: 184 LEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGG 221
+E S + + + + ++L + + + LG G
Sbjct: 202 VEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFN 240
|
| >1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A* Length = 327 | Back alignment and structure |
|---|
Score = 205 bits (523), Expect = 2e-65
Identities = 52/210 (24%), Positives = 79/210 (37%), Gaps = 18/210 (8%)
Query: 21 VSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE 80
G M + + ++ +G T DTA Y +E +LG
Sbjct: 5 RPATVLGAME----MGRRMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLG 60
Query: 81 LP--RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS 138
L +++ATK + P VR E SL+RL +DL+Y H D
Sbjct: 61 LGRSGCKVKIATKAAPMFGKTLK------PADVRFQLETSLKRLQCPRVDLFYLHFPDHG 114
Query: 139 VPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV------HPITAVQLEWSLWARD 192
PIEET+ +L +EGK +GLS + + T Q ++ R
Sbjct: 115 TPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQ 174
Query: 193 IENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
+E E+ P R G+ + PL G G+
Sbjct: 175 VETELFPCLRHFGLRFYAFNPLAGGLLTGR 204
|
| >3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp} Length = 353 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 3e-63
Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 34/231 (14%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY--T 69
+ G G+++ + G + E+ ++++ AF GIT FD A+ YGP +
Sbjct: 37 RRCGRSGVKLPAISLGLW---HNFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGS 93
Query: 70 NEILLGKALKELP---RENIQVATKFGFVELGFTSVIVKGTPE----------YVRSCCE 116
E G+ L+E R+ + ++TK G+ + Y+ + +
Sbjct: 94 AECNFGRILQEDFLPWRDELIISTKAGY-----------TMWDGPYGDWGSRKYLIASLD 142
Query: 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV 176
SL+R+ +EY+D++Y HR D P++ET+ + LV GK Y+G+S D R+A +
Sbjct: 143 QSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQAIDI 202
Query: 177 -----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
P Q ++SL+ R +E+ ++ L +E G+G + + PL G +
Sbjct: 203 LEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDR 253
|
| >3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A* Length = 327 | Back alignment and structure |
|---|
Score = 193 bits (494), Expect = 5e-61
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 13 KLGTQGLEVSKLGYGC-MSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
LG GL VS LG G ++ + +++E ++ A+ GI FDTA+ Y E
Sbjct: 7 NLGKSGLRVSCLGLGTWVT----FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAE 62
Query: 72 ILLGKALKEL--PRENIQVATKFGFVELGFTSVIVKGTPE---------YVRSCCEASLR 120
++LG +K+ R ++ + TK + G ++ +ASL
Sbjct: 63 VVLGNIIKKKGWRRSSLVITTKIFW-----------GGKAETERGLSRKHIIEGLKASLE 111
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV---- 176
RL +EY+D+ + +R D + P+EET+ M ++ +G Y G S S I A++V
Sbjct: 112 RLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQF 171
Query: 177 --HPITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
P Q E+ ++ R+ +E ++ L ++G+G + + PL G GK
Sbjct: 172 NLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 220
|
| >3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 4e-60
Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 35/231 (15%)
Query: 13 KLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY--TN 70
G GL + L G + + E +I++ AF GIT FD A+ YGP +
Sbjct: 17 YCGKSGLRLPALSLGLW---HNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSA 73
Query: 71 EILLGKALKE---LPRENIQVATKFGFVELGFTSVIVKGTPE----------YVRSCCEA 117
E G+ L+E R+ + ++TK G+ Y+ + +
Sbjct: 74 EENFGRLLREDFAAYRDELIISTKAGY-----------DMWPGPYGSGGSRKYLLASLDQ 122
Query: 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV- 176
SL+R+ +EY+D++Y HRVD + P+EET + V+ GK Y+G+S SP+ ++ +
Sbjct: 123 SLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELL 182
Query: 177 ----HPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGK 222
P+ Q ++L R ++ + ++ + G+G + + PL +G GK
Sbjct: 183 REWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGK 233
|
| >3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus} Length = 367 | Back alignment and structure |
|---|
Score = 191 bits (487), Expect = 2e-59
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 13 KLGTQGLEVSKLGYGC-MSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
LG GL VS LG G ++ + +++E ++ A+ GI FDTA+ Y E
Sbjct: 41 NLGKSGLRVSCLGLGTWVT----FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAE 96
Query: 72 ILLGKALKEL--PRENIQVATKFGFVELGFTSVIVKGTPE---------YVRSCCEASLR 120
++LG +K+ R ++ + TK + G ++ +ASL
Sbjct: 97 VVLGNIIKKKGWRRSSLVITTKIFW-----------GGKAETERGLSRKHIIEGLKASLE 145
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV---- 176
RL +EY+D+ + +R D + P+EET+ M ++ +G Y G S S I A++V
Sbjct: 146 RLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQF 205
Query: 177 --HPITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
P Q E+ ++ R+ +E ++ L ++G+G + + PL G GK
Sbjct: 206 NLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 254
|
| >1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1 Length = 346 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 8e-48
Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 13 KLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN-- 70
++ LEVS LG G M+ + SE D + + +A ++GI D A+ Y
Sbjct: 5 RIPHSSLEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60
Query: 71 -----EILLGKALKEL-PRENIQVATKFGFVELGFTSVIVKGTP---EYVRSCCEASLRR 121
E +G L + RE + +A+K I + +R SL+R
Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR 120
Query: 122 LDVEYIDLYYQHRVD-----------------TSVPIEETIGEMKKLVEEGKIKYIGLS- 163
L +Y+DLY H +V + +T+ + + GKI+YIG+S
Sbjct: 121 LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN 180
Query: 164 EASPDTIR-----RAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218
E + +R H + I +Q +SL R E + + + G+ ++ Y LG G
Sbjct: 181 ETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGT 240
Query: 219 FGGK 222
GK
Sbjct: 241 LTGK 244
|
| >1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1 Length = 317 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 6e-24
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 40/227 (17%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+KL G+E+ +G G + S + I+ +K A G DTA Y
Sbjct: 4 ATASIKLSN-GVEMPVIGLGT------WQSS--PAEVITAVKTAVKAGYRLIDTASVYQ- 53
Query: 68 YTNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121
NE +G A+KE + RE + + TK EL P + SL++
Sbjct: 54 --NEEAIGTAIKELLEEGVVKREELFITTKAWTHELA---------PGKLEGGLRESLKK 102
Query: 122 LDVEYIDLYYQH---------RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR 172
L +EY+DLY H + P+E+ + + + G K +G+S + D I R
Sbjct: 103 LQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISR 162
Query: 173 --AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
A + P+ Q+E L +++ V C++ I + Y LG
Sbjct: 163 ALALGLTPVHNSQVE--LHLYFPQHDHVDFCKKHNISVTSYATLGSP 207
|
| >3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti} Length = 298 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 2e-23
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 5 KKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADK 64
+ + G + LG+G +SG + + I+ A G DTA
Sbjct: 19 YFQSMMHAVS-SNGANIPALGFGTFRMSG--------AEVLRILPQALKLGFRHVDTAQI 69
Query: 65 YGPYTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRL 122
YG NE +G+A+++ +PR ++ + TK + + + SLR+L
Sbjct: 70 YG---NEAEVGEAIQKSGIPRADVFLTTKVWVDNYR---------HDAFIASVDESLRKL 117
Query: 123 DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT-A 181
+++DL H + VP+ E IG + ++ GK+++IG+S + + A + A
Sbjct: 118 RTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIA 177
Query: 182 V-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
Q+E+ + + +++ R LG+ + Y + G
Sbjct: 178 TNQVEYHPYLD--QTKVLQTARRLGMSLTSYYAMANG 212
|
| >3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A* Length = 326 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 1e-22
Identities = 58/254 (22%), Positives = 91/254 (35%), Gaps = 52/254 (20%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDG--ISIIKHAFSKGITFFDTADKY 65
R+ L G + +G G Y+ P S G + +K A G D A Y
Sbjct: 6 ASHRIPLSD-GNSIPIIGLGT------YSEPKSTPKGACATSVKVAIDTGYRHIDGAYIY 58
Query: 66 GPYTNEILLGKALKEL------PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119
NE +G+A++E RE+I K L T+ PE VR E +L
Sbjct: 59 Q---NEHEVGEAIREKIAEGKVRREDIFYCGK-----LWATNH----VPEMVRPTLERTL 106
Query: 120 RRLDVEYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYI 160
R L ++Y+DLY + + T M+ + G +K +
Sbjct: 107 RVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSL 166
Query: 161 GLSEASPDTIRR----AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGR 216
G+S + + H + Q+E + +++ C++ I I Y PLG
Sbjct: 167 GVSNFNRRQLELILNKPGLKHKPVSNQVE--CHPYFTQPKLLKFCQQHDIVITAYSPLGT 224
Query: 217 GFFGGKAVVESVPL 230
V S PL
Sbjct: 225 SRNPIWVNVSSPPL 238
|
| >1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ... Length = 331 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 6e-22
Identities = 55/253 (21%), Positives = 87/253 (34%), Gaps = 51/253 (20%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNS-PLSEEDGISIIKHAFSKGITFFDTADKYG 66
+ VKL G + LG+G Y + + + K A G D+A Y
Sbjct: 4 KQQCVKLND-GHFMPVLGFGT------YAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYN 56
Query: 67 PYTNEILLGKALKEL------PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
NE +G A++ RE+I +K L T PE VR E SL+
Sbjct: 57 ---NEEQVGLAIRSKIADGSVKREDIFYTSK-----LWSTF----HRPELVRPALENSLK 104
Query: 121 RLDVEYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYIG 161
+ ++Y+DLY H + V + T M+K + G K IG
Sbjct: 105 KAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIG 164
Query: 162 LSEASPDTIRR----AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+S + + + Q+E ++++ C+ I +V Y LG
Sbjct: 165 VSNFNRRQLEMILNKPGLKYKPVCNQVE--CHPYFNRSKLLDFCKSKDIVLVAYSALGSQ 222
Query: 218 FFGGKAVVESVPL 230
S L
Sbjct: 223 RDKRWVDPNSPVL 235
|
| >1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 89.5 bits (223), Expect = 3e-21
Identities = 57/251 (22%), Positives = 93/251 (37%), Gaps = 52/251 (20%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
R+ L G ++ LG G + SP +K A G D A Y
Sbjct: 3 SRILLNN-GAKMPILGLGT------WKSP--PGQVTEAVKVAIDVGYRHIDCAHVYQ--- 50
Query: 70 NEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLD 123
NE +G A++E + RE + + +K L T V+ C+ +L L
Sbjct: 51 NENEVGVAIQEKLREQVVKREELFIVSK-----LWCTYH----EKGLVKGACQKTLSDLK 101
Query: 124 VEYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164
++Y+DLY H V + I +T M++LV+EG +K IG+S
Sbjct: 102 LDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISN 161
Query: 165 ASPDTIRR--AHAVHPIT-AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220
+ + AV Q+E + +++ C+ GI + Y PLG
Sbjct: 162 FNHLQVEMILNKPGLKYKPAVNQIE--CHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRP 219
Query: 221 GKAVVESVPLD 231
+ L+
Sbjct: 220 WAKPEDPSLLE 230
|
| >2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A* Length = 344 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 3e-21
Identities = 57/236 (24%), Positives = 90/236 (38%), Gaps = 53/236 (22%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+ L + G + +G G + + + S+ G DTA +YG
Sbjct: 36 EQDHFVLKS-GHAMPAVGLGT------WRAG--SDTAHSVRTAITEAGYRHVDTAAEYG- 85
Query: 68 YTNEILLGKALKE-----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRL 122
E +GK LK + R+++ V +K L PE VR E +L+ L
Sbjct: 86 --VEKEVGKGLKAAMEAGIDRKDLFVTSKIWCTNLA---------PERVRPALENTLKDL 134
Query: 123 DVEYIDLYYQH---------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 167
++YIDLY+ H +E EM+ LV++G +K IG+ +
Sbjct: 135 QLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTV 194
Query: 168 DTIRR--AHAVHPITAVQLE----WSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+ R A P Q+E W ++I C++ GI I Y PLG
Sbjct: 195 TKLNRLLRSAKIPPAVCQMEMHPGWK------NDKIFEACKKHGIHITAYSPLGSS 244
|
| >1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa} Length = 312 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 6e-21
Identities = 58/250 (23%), Positives = 96/250 (38%), Gaps = 58/250 (23%)
Query: 8 QVPRVKL--GTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKY 65
++P L + L++ +G G ++D I A +G FDTA Y
Sbjct: 5 EIPTKVLTNTSSQLKMPVVGMGS------APDFTCKKDTKDAIIEAIKQGYRHFDTAAAY 58
Query: 66 GPYTNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119
G +E LG+ALKE + R+++ V +K E P V + SL
Sbjct: 59 G---SEQALGEALKEAIELGLVTRDDLFVTSKLWVTENH---------PHLVIPALQKSL 106
Query: 120 RRLDVEYIDLYYQH----------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163
+ L ++Y+DLY H ++ M++ ++ G K IG+S
Sbjct: 107 KTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLTKAIGVS 166
Query: 164 EASPDTIRR--AHA-VHPITAV-QLE----WSLWARDIENEIVPLCRELGIGIVPYCPLG 215
S + + A V P AV Q+E W + ++ C GI + + P+
Sbjct: 167 NFSVKKLENLLSVATVLP--AVNQVEMNLAWQ------QKKLREFCNAHGIVLTAFSPVR 218
Query: 216 RGFFGGKAVV 225
+G G V
Sbjct: 219 KGASRGPNEV 228
|
| >2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A Length = 283 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 7e-21
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 36/218 (16%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
+P V L + +G G LS+ + + A G DTA YG
Sbjct: 11 IPTVTL-NDDNTLPVVGIGV------G--ELSDSEAERSVSAALEAGYRLIDTAAAYG-- 59
Query: 69 TNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEY 126
NE +G+A+ +PR+ I V TK + GF ++ ASL RL ++Y
Sbjct: 60 -NEAAVGRAIAASGIPRDEIYVTTKLATPDQGF---------TSSQAAARASLERLGLDY 109
Query: 127 IDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT-A 181
+DLY H V ++ G + K+ E+G + IG+ + + ++ T A
Sbjct: 110 VDLYLIHWPGGDTSKYV---DSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPA 166
Query: 182 V-QLEWS-LWARDIENEIVPLCRELGIGIVPYCPLGRG 217
V Q+E L + + + I Y PLG G
Sbjct: 167 VNQIELHPLLNQA---ALREVNAGYNIVTEAYGPLGVG 201
|
| >1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A* Length = 322 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 8e-21
Identities = 56/245 (22%), Positives = 89/245 (36%), Gaps = 56/245 (22%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+P +KL + G + +G+GC + + A G FD A+ YG
Sbjct: 4 SIPDIKLSS-GHLMPSIGFGC------WKLA--NATAGEQVYQAIKAGYRLFDGAEDYG- 53
Query: 68 YTNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121
NE +G +K + RE I + +K L P+ V + +L
Sbjct: 54 --NEKEVGDGVKRAIDEGLVKREEIFLTSK-----LWNN----YHDPKNVETALNKTLAD 102
Query: 122 LDVEYIDLYYQH-------------------------RVDTSVPIEETIGEMKKLVEEGK 156
L V+Y+DL+ H V VPI ET ++KLV GK
Sbjct: 103 LKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGK 162
Query: 157 IKYIGLSEASPDTIRR--AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPL 214
IK IG+S + A +Q+E + +++ ++ G+ I Y
Sbjct: 163 IKSIGVSNFPGALLLDLLRGATIKPAVLQVE--HHPYLQQPKLIEFAQKAGVTITAYSSF 220
Query: 215 GRGFF 219
G F
Sbjct: 221 GPQSF 225
|
| >4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} Length = 288 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 1e-20
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKY 65
+ V L + G+++ + G G + SP + E + +K A G DTA Y
Sbjct: 7 GVDKAMVTL-SNGVKMPQFGLGV------WQSP-AGEVTENAVKWALCAGYRHIDTAAIY 58
Query: 66 GPYTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLD 123
NE +G L+ +PRE++ + TK E G+ E + E S ++L
Sbjct: 59 K---NEESVGAGLRASGVPREDVFITTKLWNTEQGY---------ESTLAAFEESRQKLG 106
Query: 124 VEYIDLYYQH----RVDTSVPIEETIG---EMKKLVEEGKIKYIGLSEASPDTIRRAHAV 176
V+YIDLY H + S ++ + ++L +E K++ IG+S + A+
Sbjct: 107 VDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAM 166
Query: 177 HPIT-AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+T V Q+E + + ++ C I + + PLG+G
Sbjct: 167 CTVTPMVNQVELHPL--NNQADLRAFCDAKQIKVEAWSPLGQG 207
|
| >1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A* Length = 323 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 1e-20
Identities = 58/251 (23%), Positives = 94/251 (37%), Gaps = 51/251 (20%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGI-SIIKHAFSKGITFFDTADKYGPY 68
RV L G + LG+G +D + K A G FD+A Y
Sbjct: 6 LRVALND-GNFIPVLGFGT------TVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYE-- 56
Query: 69 TNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRL 122
E +G+A++ + RE+I +K L T PE VR+C E +L+
Sbjct: 57 -VEEEVGQAIRSKIEDGTVKREDIFYTSK-----LWST----FHRPELVRTCLEKTLKST 106
Query: 123 DVEYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163
++Y+DLY H + +V I +T M+K + G K IG+S
Sbjct: 107 QLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVS 166
Query: 164 EASPDTIRR----AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219
+ + R + Q+E +++++ C+ I +V YC LG
Sbjct: 167 NFNCRQLERILNKPGLKYKPVCNQVE--CHLYLNQSKMLDYCKSKDIILVSYCTLGSSRD 224
Query: 220 GGKAVVESVPL 230
+S L
Sbjct: 225 KTWVDQKSPVL 235
|
| >1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1 Length = 298 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 2e-20
Identities = 61/226 (26%), Positives = 95/226 (42%), Gaps = 39/226 (17%)
Query: 3 EDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTA 62
+QVP+V L G+E+ LGYG + P E + A G DTA
Sbjct: 9 HHHHMQVPKVTLNN-GVEMPILGYGV------FQIP--PEKTEECVYEAIKVGYRLIDTA 59
Query: 63 DKYGPYTNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116
Y NE +G+A+K + RE + V TK ++G+ E + E
Sbjct: 60 ASYM---NEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVGY---------ESTKKAFE 107
Query: 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIG---EMKKLVEEGKIKYIGLSEASPDTIRRA 173
SL++L +EYIDLY H+ P + M+++ ++G ++ IG+S PD +
Sbjct: 108 KSLKKLQLEYIDLYLIHQ-----PFGDVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDL 162
Query: 174 HAVHPIT-AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
H I AV Q+E + + E + R I + P G
Sbjct: 163 MVHHEIVPAVNQIEIHPFYQ--RQEEIEFMRNYNIQPEAWGPFAEG 206
|
| >3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} PDB: 3qkz_A* Length = 316 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 2e-20
Identities = 52/252 (20%), Positives = 93/252 (36%), Gaps = 52/252 (20%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
VKL T ++ +G G + SP +K A G FD A Y
Sbjct: 2 TTFVKLRT-KAKMPLVGLGT------WKSP--PGQVKEAVKAAIDAGYRHFDCAYVYQ-- 50
Query: 69 TNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRL 122
NE +G+A++E + RE++ + +K L T ++ + +L L
Sbjct: 51 -NESEVGEAIQEKIKEKAVRREDLFIVSK-----LWST----FFEKSLMKEAFQKTLSDL 100
Query: 123 DVEYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163
++Y+DLY H + + + M++LV++G +K +G+S
Sbjct: 101 KLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVKALGVS 160
Query: 164 EASPDTIRR--AHAVHPIT-AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219
+ I R Q+E + +++ C GI ++ Y PLG
Sbjct: 161 NFNHFQIERLLNKPGLKHKPVTNQVE--CHPYLTQEKLIQYCHSKGIAVIAYSPLGSPDR 218
Query: 220 GGKAVVESVPLD 231
+ V L+
Sbjct: 219 PYAKPEDPVVLE 230
|
| >3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana} Length = 335 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 2e-20
Identities = 54/236 (22%), Positives = 84/236 (35%), Gaps = 53/236 (22%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+ KL T G + +G G + + + A G D A YG
Sbjct: 24 AITFFKLNT-GAKFPSVGLGT------WQAS--PGLVGDAVAAAVKIGYRHIDCAQIYG- 73
Query: 68 YTNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121
NE +G LK+ + RE++ + +K L T P+ V +L+
Sbjct: 74 --NEKEIGAVLKKLFEDRVVKREDLFITSK-----LWCT----DHDPQDVPEALNRTLKD 122
Query: 122 LDVEYIDLYYQH--------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 167
L +EY+DLY H V I T M+ L + GK + IG+S S
Sbjct: 123 LQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFST 182
Query: 168 DTIRR--AHAVHPITAVQLE----WSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+ A P Q+E W + ++ C+ G+ + Y PLG
Sbjct: 183 KKLADLLELARVPPAVNQVECHPSWR------QTKLQEFCKSKGVHLSAYSPLGSP 232
|
| >3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar} Length = 283 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 2e-20
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
VP VKL G + +LGYG + +S ++ +S + A G DTA YG
Sbjct: 25 TVPTVKL-NDGNHIPQLGYGV------W--QISNDEAVSAVSEALKAGYRHIDTATIYG- 74
Query: 68 YTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVE 125
NE +GKA+ + R +I + TK + G+ E + SL++L +
Sbjct: 75 --NEEGVGKAINGSGIARADIFLTTKLWNSDQGY---------ESTLKAFDTSLKKLGTD 123
Query: 126 YIDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT- 180
Y+DLY H D + ET KL EEG++K IG+S + R +T
Sbjct: 124 YVDLYLIHWPMPSKDLFM---ETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTP 180
Query: 181 AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+ Q+E L + ++E+ + I + PLG+G
Sbjct: 181 VLNQIE--LHPQFQQDELRLFHGKHDIATEAWSPLGQG 216
|
| >3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia} Length = 334 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 3e-20
Identities = 56/250 (22%), Positives = 95/250 (38%), Gaps = 68/250 (27%)
Query: 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG 66
L+ G+ +LG+G + +P E + ++ A G D A Y
Sbjct: 12 LEAQTQGPGS-MQYPPRLGFGT------WQAP--PEAVQTAVETALMTGYRHIDCAYVYQ 62
Query: 67 PYTNEILLGKALKE--------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118
NE +G+A + + RE++ + +K L PE VR C+ +
Sbjct: 63 ---NEEAIGRAFGKIFKDASSGIKREDVWITSK-----LWNY----NHRPELVREQCKKT 110
Query: 119 LRRLDVEYIDLYYQH---------------------RVDTSVPIEETIGEMKKLVEEGKI 157
+ L V+Y+DL+ H + VP+ +T M++LVEEG +
Sbjct: 111 MSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGLV 170
Query: 158 KYIGLSEASPDTIRR--AHAVHPITAVQLEWSLWARDIE-------NEIVPLCRELGIGI 208
K+IG+S + + +A Q IE + V C + GIG+
Sbjct: 171 KHIGVSNYTVPLLADLLNYAKIKPLVNQ---------IEIHPWHPNDATVKFCLDNGIGV 221
Query: 209 VPYCPLGRGF 218
Y P+G +
Sbjct: 222 TAYSPMGGSY 231
|
| >1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A* Length = 278 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 7e-20
Identities = 51/218 (23%), Positives = 83/218 (38%), Gaps = 36/218 (16%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
VP + L G + +LGYG + + D ++ A G DTA YG
Sbjct: 3 VPSIVL-NDGNSIPQLGYGV------F--KVPPADTQRAVEEALEVGYRHIDTAAIYG-- 51
Query: 69 TNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEY 126
NE +G A+ + R+++ + TK + + SL +L ++
Sbjct: 52 -NEEGVGAAIAASGIARDDLFITTKLWNDRHDG---------DEPAAAIAESLAKLALDQ 101
Query: 127 IDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT-A 181
+DLY H D V +M +L G + IG+S + R A + A
Sbjct: 102 VDLYLVHWPTPAADNYV---HAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPA 158
Query: 182 V-QLEWS-LWARDIENEIVPLCRELGIGIVPYCPLGRG 217
V Q+E + + EI + I + PLG+G
Sbjct: 159 VNQIELHPAYQQR---EITDWAAAHDVKIESWGPLGQG 193
|
| >1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei} Length = 281 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 8e-20
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 35/217 (16%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
+KL + G+ + LG+G + E + A G DTA Y
Sbjct: 9 TQSLKL-SNGVMMPVLGFGM------WKLQDGNE-AETATMWAIKSGYRHIDTAAIYK-- 58
Query: 69 TNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEY 126
NE G+A+ +PRE + V TK + G+ E S E S+++L +EY
Sbjct: 59 -NEESAGRAIASCGVPREELFVTTKLWNSDQGY---------ESTLSAFEKSIKKLGLEY 108
Query: 127 IDLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT-A 181
+DLY H P ++ + +KL + K++ IG+S I +
Sbjct: 109 VDLYLIHW-----PGKDKFIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPM 163
Query: 182 V-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
V Q+E + + C+ I + + PLG+G
Sbjct: 164 VNQIELHPL--LNQKALCEYCKSKNIAVTAWSPLGQG 198
|
| >4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A* Length = 290 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 3e-19
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 35/218 (16%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
V L + + +LG G + + + + ++ A G DTA Y
Sbjct: 12 NYNCVTL-HNSVRMPQLGLGV------WRAQ-DGAETANAVRWAIEAGYRHIDTAYIYS- 62
Query: 68 YTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVE 125
NE +G+ ++E +PRE + V TK + G+ E + E S L +E
Sbjct: 63 --NERGVGQGIRESGVPREEVWVTTKVWNSDQGY---------EKTLAAFERSRELLGLE 111
Query: 126 YIDLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT- 180
YIDLY H P ++ + ++KL EE K++ IG+S P + I
Sbjct: 112 YIDLYLIHW-----PGKKKFVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRP 166
Query: 181 AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
V Q+E + + C++ I I + PLG G
Sbjct: 167 MVNQVELHPL--FQQRTLREFCKQHNIAITAWSPLGSG 202
|
| >3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana} Length = 331 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 4e-19
Identities = 55/235 (23%), Positives = 86/235 (36%), Gaps = 57/235 (24%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+ +L T G ++ +G G ++ + I+ A G D A YG
Sbjct: 24 PIRFFELNT-GAKLPCVGLGTYAM--VATA----------IEQAIKIGYRHIDCASIYG- 69
Query: 68 YTNEILLGKALKEL------PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121
NE +G LK+L RE + + +K L PE V E +L+
Sbjct: 70 --NEKEIGGVLKKLIGDGFVKREELFITSK-----LWSNDH----LPEDVPKALEKTLQD 118
Query: 122 LDVEYIDLYYQH--------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 167
L ++Y+DLY H + T I T M+ L + GK + IG+S S
Sbjct: 119 LQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWKAMEALYDSGKARAIGVSNFSS 178
Query: 168 DTIRR--AHAVHPITAVQLE----WSLWARDIENEIVPLCRELGIGIVPYCPLGR 216
+ A Q+E W + + LC+ G+ + Y PLG
Sbjct: 179 KKLTDLLNVARVTPAVNQVECHPVWQ------QQGLHELCKSKGVHLSGYSPLGS 227
|
| >3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A* Length = 276 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 6e-19
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 35/216 (16%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
VKL G+E+ G G + E +K A G DTA Y
Sbjct: 7 DTVKL-HNGVEMPWFGLGV------FKVENGNE-ATESVKAAIKNGYRSIDTAAIYK--- 55
Query: 70 NEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
NE +G +KE + RE + + +K + G+ E + E SL RL ++Y+
Sbjct: 56 NEEGVGIGIKESGVAREELFITSKVWNEDQGY---------ETTLAAFEKSLERLQLDYL 106
Query: 128 DLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT-AV 182
DLY H P ++ + ++KL ++GKI+ IG+S + I V
Sbjct: 107 DLYLIHW-----PGKDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMV 161
Query: 183 -QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
Q+E+ + E+ C+ GI + + PL +G
Sbjct: 162 NQVEFHPR--LTQKELRDYCKGQGIQLEAWSPLMQG 195
|
| >1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1 Length = 296 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 3e-18
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 38/219 (17%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+KL G + +LG G + S E+ I+ I+ A G DTA Y
Sbjct: 24 NPTVIKL-QDGNVMPQLGLGV------W--QASNEEVITAIQKALEVGYRSIDTAAAYK- 73
Query: 68 YTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVE 125
NE +GKALK + RE + + TK + + R SL++L ++
Sbjct: 74 --NEEGVGKALKNASVNREELFITTK----------LWNDDH-KRPREALLDSLKKLQLD 120
Query: 126 YIDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT- 180
YIDLY H +D V E M +L +EG IK IG+ ++R +T
Sbjct: 121 YIDLYLMHWPVPAIDHYV---EAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTP 177
Query: 181 AV-QLEWS-LWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+ Q+E L + ++ I + PL +G
Sbjct: 178 VINQIELHPLMQQ---RQLHAWNATHKIQTESWSPLAQG 213
|
| >3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} Length = 324 | Back alignment and structure |
|---|
Score = 71.1 bits (174), Expect = 1e-14
Identities = 51/252 (20%), Positives = 82/252 (32%), Gaps = 51/252 (20%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGI-SIIKHAFSKGITFFDTADKYGP 67
V L G + LG+G Y A G DTA Y
Sbjct: 6 QHCVXLND-GHLIPALGFGT------YXPXEVPXSXSLEAACLALDVGYRHVDTAYAYQ- 57
Query: 68 YTNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121
E +G+A++ + RE++ V TK PE V E SL
Sbjct: 58 --VEEEIGQAIQSXIXAGVVXREDLFVTTKLWCTCFR---------PELVXPALEXSLXX 106
Query: 122 LDVEYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGL 162
L ++Y+DLY H + +V +T +++ + G + IG+
Sbjct: 107 LQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGLVXSIGV 166
Query: 163 SEASPDTIRR----AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218
S + + R + Q+E L+ + ++ C I +V Y LG
Sbjct: 167 SNFNHRQLERILNXPGLXYXPVCNQVECHLYLN--QRXLLDYCESXDIVLVAYGALGTQR 224
Query: 219 FGGKAVVESVPL 230
+ S L
Sbjct: 225 YXEWVDQNSPVL 236
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 249 | |||
| 3v0s_A | 337 | Perakine reductase; AKR superfamily, oxidoreductas | 100.0 | |
| 3n2t_A | 348 | Putative oxidoreductase; aldo/keto reductase super | 100.0 | |
| 1pyf_A | 312 | IOLS protein; beta-alpha barrel, aldo-keto reducta | 100.0 | |
| 1pz1_A | 333 | GSP69, general stress protein 69; beta-alpha barre | 100.0 | |
| 1ynp_A | 317 | Oxidoreductase, AKR11C1; aldo-keto reductase, NADP | 100.0 | |
| 3eau_A | 327 | Voltage-gated potassium channel subunit beta-2; kv | 100.0 | |
| 3n6q_A | 346 | YGHZ aldo-keto reductase; TIM barrel, oxidoreducta | 100.0 | |
| 3erp_A | 353 | Putative oxidoreductase; funded by the national in | 100.0 | |
| 4exb_A | 292 | Putative uncharacterized protein; aldo-keto reduct | 100.0 | |
| 3lut_A | 367 | Voltage-gated potassium channel subunit beta-2; vo | 100.0 | |
| 1lqa_A | 346 | TAS protein; TIM barrel, structure 2 function proj | 100.0 | |
| 1ur3_M | 319 | Hypothetical oxidoreductase YDHF; NADP binding, al | 100.0 | |
| 3f7j_A | 276 | YVGN protein; aldo-keto reductase, oxidoreductase; | 100.0 | |
| 3up8_A | 298 | Putative 2,5-diketo-D-gluconic acid reductase B; n | 100.0 | |
| 3o0k_A | 283 | Aldo/keto reductase; ssgcid, ALS collaborative cry | 100.0 | |
| 3b3e_A | 310 | YVGN protein; aldo-keto reductase, oxidoreductase; | 100.0 | |
| 1vbj_A | 281 | Prostaglandin F synthase; TIM barrel, oxidoreducta | 100.0 | |
| 2wzm_A | 283 | Aldo-keto reductase; oxidoreductase; HET: NA7; 1.6 | 100.0 | |
| 4f40_A | 288 | Prostaglandin F2-alpha synthase/D-arabinose dehyd; | 100.0 | |
| 1hw6_A | 278 | 2,5-diketo-D-gluconic acid reductase; aldo-keto re | 100.0 | |
| 3ln3_A | 324 | Dihydrodiol dehydrogenase; putative reductase, str | 100.0 | |
| 3buv_A | 326 | 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reduc | 100.0 | |
| 4gie_A | 290 | Prostaglandin F synthase; structural genomics, nia | 100.0 | |
| 1afs_A | 323 | 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; | 100.0 | |
| 1gve_A | 327 | Aflatoxin B1 aldehyde reductase member 3; oxidored | 100.0 | |
| 2bp1_A | 360 | Aflatoxin B1 aldehyde reductase member 2; oxidored | 100.0 | |
| 1zgd_A | 312 | Chalcone reductase; polyketide, deoxychalcone, iso | 100.0 | |
| 1qwk_A | 317 | Aldose reductase, aldo-keto reductase family 1 mem | 100.0 | |
| 1mzr_A | 296 | 2,5-diketo-D-gluconate reductase A; alpha/beta-bar | 100.0 | |
| 1s1p_A | 331 | Aldo-keto reductase family 1 member C3; TIM-barrel | 100.0 | |
| 3b3d_A | 314 | YTBE protein, putative morphine dehydrogenase; ald | 100.0 | |
| 1vp5_A | 298 | 2,5-diketo-D-gluconic acid reductase; TM1009, stru | 100.0 | |
| 1mi3_A | 322 | Xylose reductase, XR; aldo-keto reductase, beta-al | 100.0 | |
| 3krb_A | 334 | Aldose reductase; ssgcid, SBRI, emerald biostructu | 100.0 | |
| 3o3r_A | 316 | Aldo-keto reductase family 1, member B7; aldose re | 100.0 | |
| 1us0_A | 316 | Aldose reductase; oxidoreductase, NADP, IDD594; HE | 100.0 | |
| 3h7u_A | 335 | Aldo-keto reductase; stress response, NADP, drough | 100.0 | |
| 3h7r_A | 331 | Aldo-keto reductase; stress response, NADP, drough | 100.0 | |
| 4gac_A | 324 | Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldhe | 100.0 | |
| 2bgs_A | 344 | Aldose reductase; holoenzyme, aldo/keto reductase, | 100.0 | |
| 3cf4_A | 807 | Acetyl-COA decarboxylase/synthase alpha subunit; m | 97.83 | |
| 1mdl_A | 359 | Mandelate racemase; isomerase, mandelate pathway, | 94.28 | |
| 1nu5_A | 370 | Chloromuconate cycloisomerase; enzyme, dehalogenat | 93.82 | |
| 2nql_A | 388 | AGR_PAT_674P, isomerase/lactonizing enzyme; enolas | 93.64 | |
| 2o56_A | 407 | Putative mandelate racemase; dehydratase, structur | 93.61 | |
| 2ovl_A | 371 | Putative racemase; structural genomics, PSI-2, pro | 93.54 | |
| 2zad_A | 345 | Muconate cycloisomerase; muconate lactonizing enzy | 93.48 | |
| 3ik4_A | 365 | Mandelate racemase/muconate lactonizing protein; s | 93.44 | |
| 3i4k_A | 383 | Muconate lactonizing enzyme; structural genomics, | 93.43 | |
| 3gd6_A | 391 | Muconate cycloisomerase; structural genomics, NYSG | 93.31 | |
| 2rdx_A | 379 | Mandelate racemase/muconate lactonizing enzyme, P; | 93.31 | |
| 2pgw_A | 384 | Muconate cycloisomerase; enolase superfamily, octa | 93.17 | |
| 3i6e_A | 385 | Muconate cycloisomerase I; structural genomics, NY | 92.93 | |
| 2og9_A | 393 | Mandelate racemase/muconate lactonizing enzyme; NY | 92.67 | |
| 3s5s_A | 389 | Mandelate racemase/muconate lactonizing enzyme FA | 92.51 | |
| 1tkk_A | 366 | Similar to chloromuconate cycloisomerase; epimeras | 92.31 | |
| 2qde_A | 397 | Mandelate racemase/muconate lactonizing enzyme FA | 92.3 | |
| 3dg3_A | 367 | Muconate cycloisomerase; muconate lactonizing enzy | 92.29 | |
| 2qgy_A | 391 | Enolase from the environmental genome shotgun sequ | 92.23 | |
| 3q45_A | 368 | Mandelate racemase/muconate lactonizing enzyme FA | 92.2 | |
| 2pp0_A | 398 | L-talarate/galactarate dehydratase; enolase superf | 91.93 | |
| 3jva_A | 354 | Dipeptide epimerase; enolase superfamily, isomeras | 91.8 | |
| 2ox4_A | 403 | Putative mandelate racemase; enolase, dehydratase, | 91.75 | |
| 3mwc_A | 400 | Mandelate racemase/muconate lactonizing protein; e | 91.67 | |
| 3eez_A | 378 | Putative mandelate racemase/muconate lactonizing e | 91.42 | |
| 1r0m_A | 375 | N-acylamino acid racemase; isomerase; 1.30A {Deino | 91.42 | |
| 3r0u_A | 379 | Enzyme of enolase superfamily; structural genomics | 91.27 | |
| 3fv9_G | 386 | Mandelate racemase/muconate lactonizing enzyme; st | 91.16 | |
| 2gl5_A | 410 | Putative dehydratase protein; structural genomics, | 90.95 | |
| 2p8b_A | 369 | Mandelate racemase/muconate lactonizing enzyme fam | 90.9 | |
| 3bjs_A | 428 | Mandelate racemase/muconate lactonizing enzyme; en | 90.79 | |
| 3toy_A | 383 | Mandelate racemase/muconate lactonizing enzyme FA | 90.73 | |
| 2ps2_A | 371 | Putative mandelate racemase/muconate lactonizing e | 90.66 | |
| 2qq6_A | 410 | Mandelate racemase/muconate lactonizing enzyme- li | 90.53 | |
| 3qld_A | 388 | Mandelate racemase/muconate lactonizing protein; s | 90.52 | |
| 4dye_A | 398 | Isomerase; enolase family protein, EFI, enzym func | 90.39 | |
| 2qdd_A | 378 | Mandelate racemase/muconate lactonizing enzyme; en | 90.22 | |
| 2zc8_A | 369 | N-acylamino acid racemase; octamer, TIM beta/alpha | 90.12 | |
| 4dwd_A | 393 | Mandelate racemase/muconate lactonizing enzyme, C | 90.11 | |
| 3tj4_A | 372 | Mandelate racemase; enolase, dehydratase, enzyme f | 89.97 | |
| 3my9_A | 377 | Muconate cycloisomerase; structural genomics, PSI- | 89.97 | |
| 2hzg_A | 401 | Mandelate racemase/muconate lactonizing enzyme/EN | 89.74 | |
| 3u9i_A | 393 | Mandelate racemase/muconate lactonizing enzyme, C | 89.63 | |
| 2poz_A | 392 | Putative dehydratase; octamer, structural genomics | 89.52 | |
| 2hxt_A | 441 | L-fuconate dehydratase; enolase superfamily, D-ery | 89.15 | |
| 4e8g_A | 391 | Enolase, mandelate racemase/muconate lactonizing e | 88.85 | |
| 3ro6_B | 356 | Putative chloromuconate cycloisomerase; TIM barrel | 88.54 | |
| 3ozy_A | 389 | Putative mandelate racemase; beta-alpha barrel, en | 88.49 | |
| 1tzz_A | 392 | Hypothetical protein L1841; structural genomics, m | 88.49 | |
| 1sjd_A | 368 | N-acylamino acid racemase; lyase, isomerase; HET: | 88.23 | |
| 1rvk_A | 382 | Isomerase/lactonizing enzyme; enolase superfamily, | 87.86 | |
| 3rr1_A | 405 | GALD, putative D-galactonate dehydratase; enolase, | 87.82 | |
| 2gdq_A | 382 | YITF; mandelate racemase/muconate lactonizing enzy | 87.59 | |
| 3va8_A | 445 | Probable dehydratase; enolase, magnesium binding s | 87.53 | |
| 1wuf_A | 393 | Hypothetical protein LIN2664; structural genomics, | 87.28 | |
| 3stp_A | 412 | Galactonate dehydratase, putative; PSI biology, st | 86.57 | |
| 4a35_A | 441 | Mitochondrial enolase superfamily member 1; isomer | 86.41 | |
| 2chr_A | 370 | Chloromuconate cycloisomerase; 3.00A {Cupriavidus | 86.39 | |
| 3fcp_A | 381 | L-Ala-D/L-Glu epimerase, A muconate lactonizing en | 86.37 | |
| 3p3b_A | 392 | Mandelate racemase/muconate lactonizing protein; e | 86.01 | |
| 1kko_A | 413 | 3-methylaspartate ammonia-lyase; enolase superfami | 85.91 | |
| 3sjn_A | 374 | Mandelate racemase/muconate lactonizing protein; e | 85.49 | |
| 3ddm_A | 392 | Putative mandelate racemase/muconate lactonizing e | 85.14 | |
| 3vdg_A | 445 | Probable glucarate dehydratase; enolase, magnesium | 84.82 | |
| 3ugv_A | 390 | Enolase; enzyme function initiative, EFI, lyase; 2 | 84.62 | |
| 3dgb_A | 382 | Muconate cycloisomerase; muconate lactonizing enzy | 84.59 | |
| 4e5t_A | 404 | Mandelate racemase / muconate lactonizing enzyme, | 84.2 | |
| 2oz8_A | 389 | MLL7089 protein; structural genomics, unknown func | 83.99 | |
| 3vc5_A | 441 | Mandelate racemase/muconate lactonizing protein; d | 83.88 | |
| 1chr_A | 370 | Chloromuconate cycloisomerase; 3.00A {Ralstonia eu | 82.35 | |
| 3t6c_A | 440 | RSPA, putative MAND family dehydratase; enolase, m | 82.08 | |
| 3rcy_A | 433 | Mandelate racemase/muconate lactonizing enzyme-LI | 81.99 | |
| 1nsj_A | 205 | PRAI, phosphoribosyl anthranilate isomerase; therm | 81.82 | |
| 3mkc_A | 394 | Racemase; metabolic process, PSI2, NYSGXRC, struct | 81.81 | |
| 3r4e_A | 418 | Mandelate racemase/muconate lactonizing enzyme; en | 81.61 | |
| 2ozt_A | 332 | TLR1174 protein; structural genomics, O-succinylbe | 81.4 | |
| 4g8t_A | 464 | Glucarate dehydratase; enolase, enzyme function IN | 81.24 | |
| 4e4u_A | 412 | Mandalate racemase/muconate lactonizing enzyme; ma | 81.01 |
| >3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-56 Score=394.29 Aligned_cols=230 Identities=72% Similarity=1.201 Sum_probs=194.7
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC-CchHHHHHHHHHcCCCCCeE
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQ 87 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~-g~se~~lg~~l~~~~r~~~~ 87 (249)
|+||+||++|++||+||||||++|+.|+...+++++.++|+.|+++|||+||||+.||+ |.+|+.+|++|+..+|++++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~ 80 (337)
T 3v0s_A 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQ 80 (337)
T ss_dssp CCEEECSSSSCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCE
T ss_pred CCeeecCCCCceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceE
Confidence 89999999999999999999999987876668999999999999999999999999997 58999999999866899999
Q ss_pred EEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCH
Q 025707 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 167 (249)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~ 167 (249)
|+||++......+....+.+++.+++++++||++||+||||+|++|+|+...+++++|++|++|+++|+||+||||||++
T Consensus 81 i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~ 160 (337)
T 3v0s_A 81 VGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASP 160 (337)
T ss_dssp EEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred EEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeEEeccCCCH
Confidence 99999875422222334678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCC
Q 025707 168 DTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFS 238 (249)
Q Consensus 168 ~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~ 238 (249)
++++++++..+++++|++||++++..+.+++++|+++||+|++|+||++|+|+|+.....+++++++...|
T Consensus 161 ~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~~~~~~~~~~~~~ 231 (337)
T 3v0s_A 161 DTIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLPENSVLTSHP 231 (337)
T ss_dssp HHHHHHHHHSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHHHHHHHHHHHC------------
T ss_pred HHHHHHhccCCceEEEeeccccccchhHHHHHHHHHcCceEEEeccccCcccCCCCCCCCCCCcchhhccc
Confidence 99999999999999999999999987778999999999999999999999999873333444444444433
|
| >3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-55 Score=387.91 Aligned_cols=232 Identities=30% Similarity=0.480 Sum_probs=204.3
Q ss_pred cccccCCceecCCCCcccCcceeecccccCC-CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCC
Q 025707 4 DKKLQVPRVKLGTQGLEVSKLGYGCMSLSGC-YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP 82 (249)
Q Consensus 4 ~~~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~-~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~ 82 (249)
.+|. |+|++||++|++||+||||||++++. |+. .+++++.++|+.|+++|||+||||+.||.|.+|+.+|++|+. +
T Consensus 15 ~~m~-M~~~~lg~tg~~vs~lglGt~~~g~~~~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~ 91 (348)
T 3n2t_A 15 SHMA-SDTIRIPGIDTPLSRVALGTWAIGGWMWGG-PDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE-K 91 (348)
T ss_dssp --CT-TSEECCTTCSSCEESEEEECTTSSCSSSCS-TTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH-S
T ss_pred CCCC-ceeeecCCCCCccCCEeEeCccccCCCCCC-CCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh-C
Confidence 3453 99999999999999999999999863 554 489999999999999999999999999999999999999996 8
Q ss_pred CCCeEEEeccccccc-CCc---ccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee
Q 025707 83 RENIQVATKFGFVEL-GFT---SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK 158 (249)
Q Consensus 83 r~~~~I~tK~~~~~~-~~~---~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 158 (249)
|++++|+||++.... .++ ....+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++|+||
T Consensus 92 R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir 171 (348)
T 3n2t_A 92 PNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIR 171 (348)
T ss_dssp CCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEE
T ss_pred CCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcce
Confidence 999999999975431 111 2234578999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCC-CCCCCCcccccC
Q 025707 159 YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV-ESVPLDSFLVCF 237 (249)
Q Consensus 159 ~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~-~~~~~~~~~~~~ 237 (249)
+||||||++++++++++..+++++|++||++++..+.+++++|+++||+|++|+||++|+|+|++.. ..++++++|...
T Consensus 172 ~iGvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~r~~~ 251 (348)
T 3n2t_A 172 ALGVSNFSPEQMDIFREVAPLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDLRSND 251 (348)
T ss_dssp EEEEESCCHHHHHHHHHHSCCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBCTTGGGGGGTCCCTTCCCCTTSGGGGC
T ss_pred EEecCCCCHHHHHHHHHhCCccEEEeeecCccCchHHHHHHHHHHcCCeEEEeecccCccccCCccCCCCCCCcchhhcc
Confidence 9999999999999999999999999999999998778999999999999999999999999999543 344555555443
Q ss_pred C
Q 025707 238 S 238 (249)
Q Consensus 238 ~ 238 (249)
|
T Consensus 252 ~ 252 (348)
T 3n2t_A 252 P 252 (348)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-55 Score=381.45 Aligned_cols=225 Identities=31% Similarity=0.574 Sum_probs=198.6
Q ss_pred CCceecCCCCcccCcceeecccccCC--CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCe
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGC--YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENI 86 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~--~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~ 86 (249)
|+|++||++|++||+||||||++|+. |+ ..+++++.++|+.|++.|||+||||+.||+|.+|+.+|++|+..+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~ 79 (312)
T 1pyf_A 1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLYP-NLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDV 79 (312)
T ss_dssp -CCEECTTSCCEECSBCEECTTSSCTTTCS-SCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGC
T ss_pred CCeeecCCCCCcccCEeEeccccCCCCCCC-CCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeE
Confidence 78999999999999999999999864 43 2478999999999999999999999999999999999999985579999
Q ss_pred EEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 025707 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 166 (249)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 166 (249)
+|+||++... ..+....+.+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++|+||+||||||+
T Consensus 80 ~i~TK~g~~~-~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (312)
T 1pyf_A 80 VIATKAAHRK-QGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFS 158 (312)
T ss_dssp EEEEEECEEE-ETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCC
T ss_pred EEEEEeCCCC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHCCCcCEEEecCCC
Confidence 9999986321 111112457899999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCC-CCCCCCCcccc
Q 025707 167 PDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV-VESVPLDSFLV 235 (249)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~-~~~~~~~~~~~ 235 (249)
+++++++++..+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++. ...++++++|.
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~~~~~~~~~~~~~~~r~ 228 (312)
T 1pyf_A 159 LEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRN 228 (312)
T ss_dssp HHHHHHHTTTSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCCTTCCCCTTCGGG
T ss_pred HHHHHHHHhhCCceEEeccCCccccchHHHHHHHHHHcCCeEEEecccccccccCCCCCCCCCCCccccc
Confidence 9999999998899999999999999876789999999999999999999999999853 23445555553
|
| >1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-54 Score=376.11 Aligned_cols=214 Identities=33% Similarity=0.552 Sum_probs=194.5
Q ss_pred CCceecCCCCcccCcceeecccccCC-CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCe
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGC-YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENI 86 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~-~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~ 86 (249)
|+|++||++|++||+||||||++++. |+ ..+++++.++|+.|+++|||+||||+.||.|.+|+.+|++|+. .+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~g-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~ 79 (333)
T 1pz1_A 1 MEYTSIADTGIEASRIGLGTWAIGGTMWG-GTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQV 79 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTT-CCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGC
T ss_pred CCceecCCCCCcccCEeEechhhcCCcCC-CCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeE
Confidence 78999999999999999999999874 65 3488999999999999999999999999999999999999986 379999
Q ss_pred EEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 025707 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 166 (249)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 166 (249)
+|+||++..... +....+.+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++|+||+||||||+
T Consensus 80 ~i~TK~~~~~~~-~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (333)
T 1pz1_A 80 ILATKTALDWKN-NQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFS 158 (333)
T ss_dssp EEEEEECEEESS-SCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCC
T ss_pred EEEEeeCccCCC-CCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHHCCcCCEEEecCCC
Confidence 999999732110 0011246899999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCC
Q 025707 167 PDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (249)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~ 224 (249)
+++++++++..+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++.
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~ 216 (333)
T 1pz1_A 159 IEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMT 216 (333)
T ss_dssp HHHHHHHHTTSCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCC
T ss_pred HHHHHHHHhcCCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccCCccCCCcc
Confidence 9999999999999999999999999876889999999999999999999999999853
|
| >1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-55 Score=379.02 Aligned_cols=209 Identities=35% Similarity=0.566 Sum_probs=184.9
Q ss_pred cccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCC
Q 025707 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPREN 85 (249)
Q Consensus 6 ~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~ 85 (249)
+..|+||++|++|++||+||||||+++. +.+++.++|+.|++.|||+||||+.||.|.+|+.+|++|+. +|++
T Consensus 18 ~~~M~~r~lg~tg~~vs~lglGt~~~g~------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~~ 90 (317)
T 1ynp_A 18 GSHMKKRQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG-RRQD 90 (317)
T ss_dssp --CCCEEECTTSSCEEESBCBCSCCCCS------CHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT-CGGG
T ss_pred cCCcceeecCCCCCcccCEeEcCcccCC------CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc-CCCe
Confidence 3579999999999999999999999875 56899999999999999999999999999999999999995 8999
Q ss_pred eEEEecccccccCCc-ccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 86 IQVATKFGFVELGFT-SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 86 ~~I~tK~~~~~~~~~-~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
++|+||++....... ....+.+++.+++++++||++||+||||+|++|+|+...+++++|++|++|+++|+||+|||||
T Consensus 91 v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 170 (317)
T 1ynp_A 91 IILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISS 170 (317)
T ss_dssp CEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEEC
T ss_pred EEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCChHHHHHHHHHHHhCCceEEEEecC
Confidence 999999986432110 0123578999999999999999999999999999998888999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCC
Q 025707 165 ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (249)
Q Consensus 165 ~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~ 222 (249)
|++++++++++..+++++|++||++++..+. ++++|+++||+|++|+||++|+|+++
T Consensus 171 ~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a~spL~~G~L~~~ 227 (317)
T 1ynp_A 171 IRPNVIKEYLKRSNIVSIMMQYSILDRRPEE-WFPLIQEHGVSVVVRGPVARGLLSRR 227 (317)
T ss_dssp CCHHHHHHHHHHSCCCEEEEECBTTBCGGGG-GHHHHHHTTCEEEEECTTGGGTTSSS
T ss_pred CCHHHHHHHHhcCCCEEEeccCCchhCCHHH-HHHHHHHcCCeEEEecCccCcccCCC
Confidence 9999999999988899999999999987544 99999999999999999999999987
|
| >3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-53 Score=372.25 Aligned_cols=212 Identities=29% Similarity=0.467 Sum_probs=190.4
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCe
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENI 86 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~ 86 (249)
|+||+||++|++||+||||||.. ||...+.+++.++|+.|+++|||+||||+.||+|.+|+.+|++|+. .+|+++
T Consensus 3 m~yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v 79 (327)
T 3eau_A 3 QFYRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSL 79 (327)
T ss_dssp CSEEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGC
T ss_pred chhcccCCCCCcccceeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhcCCccCeE
Confidence 89999999999999999999842 4445688999999999999999999999999988999999999987 579999
Q ss_pred EEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCC
Q 025707 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 166 (249)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 166 (249)
+|+||+++... .....+.+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++|+||+||||||+
T Consensus 80 ~I~TK~~~~~~--~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 157 (327)
T 3eau_A 80 VITTKIFWGGK--AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWS 157 (327)
T ss_dssp EEEEEESBCCS--SGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred EEEEeecCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEeecCCC
Confidence 99999864321 1123457899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc------CCceEEeeecCccccch-hhhHHHHHHHhCCcEEecccCcccccCCCCCC
Q 025707 167 PDTIRRAHAV------HPITAVQLEWSLWARDI-ENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (249)
Q Consensus 167 ~~~l~~~~~~------~~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~ 225 (249)
+++++++... .+++++|++||++++.. +.+++++|+++||++++|+||++|+|+|++..
T Consensus 158 ~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~ 223 (327)
T 3eau_A 158 SMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 223 (327)
T ss_dssp HHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTT
T ss_pred HHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccCceecCcccC
Confidence 9999988654 57999999999998863 36799999999999999999999999999654
|
| >3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-52 Score=370.04 Aligned_cols=220 Identities=29% Similarity=0.543 Sum_probs=193.6
Q ss_pred Ccccccc-cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC--CchHHHHHHH
Q 025707 1 MAEDKKL-QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP--YTNEILLGKA 77 (249)
Q Consensus 1 ~~~~~~~-~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~--g~se~~lg~~ 77 (249)
|++.++. .|+||+||++|++||.||||||+. ++...+.+++.++|+.|++.|||+||||+.||+ |.||+.+|++
T Consensus 4 ~~~~~~~~~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~a 80 (346)
T 3n6q_A 4 LANPERYGQMQYRYCGKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRL 80 (346)
T ss_dssp CCCTTTTSSCCEEECTTSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHH
T ss_pred ccCCCcccCceeEecCCCCCeecCeeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHH
Confidence 5666664 599999999999999999999853 344557899999999999999999999999997 8899999999
Q ss_pred HHc--CC-CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc
Q 025707 78 LKE--LP-RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE 154 (249)
Q Consensus 78 l~~--~~-r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~ 154 (249)
|++ .+ |++++|+||++...... ......+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++
T Consensus 81 l~~~~~~~R~~~~I~TK~g~~~~~~-~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~ 159 (346)
T 3n6q_A 81 LREDFAAYRDELIISTKAGYDMWPG-PYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQS 159 (346)
T ss_dssp HHHHCTTTGGGCEEEEEECSCCSSS-TTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHT
T ss_pred HHhhcccccccEEEEEEecccCCCC-CCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHc
Confidence 987 34 99999999987543211 111234899999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEcCCCCHHHHHHHhhc-----CCceEEeeecCccccchhh-hHHHHHHHhCCcEEecccCcccccCCCCC
Q 025707 155 GKIKYIGLSEASPDTIRRAHAV-----HPITAVQLEWSLWARDIEN-EIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (249)
Q Consensus 155 G~ir~iGvs~~~~~~l~~~~~~-----~~~~~~q~~~n~~~~~~~~-~~~~~~~~~gi~v~a~spl~~G~l~g~~~ 224 (249)
|+||+||||||++++++++.+. .+++++|++||++++..+. +++++|+++||+|++|+||++|+|++++.
T Consensus 160 Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~ 235 (346)
T 3n6q_A 160 GKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL 235 (346)
T ss_dssp TSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGGGGGGTSCC
T ss_pred CCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccCeecCCCcc
Confidence 9999999999999999987654 5788999999999987655 89999999999999999999999999854
|
| >3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-52 Score=367.53 Aligned_cols=214 Identities=29% Similarity=0.545 Sum_probs=190.5
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC--CchHHHHHHHHHc-C--C
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP--YTNEILLGKALKE-L--P 82 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~--g~se~~lg~~l~~-~--~ 82 (249)
.|+||+||++|++||+||||||+. ||...+.+++.++|+.|++.|||+||||+.||+ |.+|+.||++|++ . .
T Consensus 33 ~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~ 109 (353)
T 3erp_A 33 TMEYRRCGRSGVKLPAISLGLWHN---FGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPW 109 (353)
T ss_dssp SCCEEECSSSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGG
T ss_pred cceeeecCCCCCccCCeeecChhh---cCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCC
Confidence 599999999999999999999932 333458899999999999999999999999998 8899999999985 3 3
Q ss_pred CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 025707 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 162 (249)
Q Consensus 83 r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 162 (249)
|++++|+||++...... ......+++.+++++++||++||+||||+|++|+|+...+++++|++|++|+++|+||+|||
T Consensus 110 R~~v~I~TK~g~~~~~~-~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGv 188 (353)
T 3erp_A 110 RDELIISTKAGYTMWDG-PYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGI 188 (353)
T ss_dssp GGGCEEEEEESSCCSSS-TTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CCeEEEEeeeccCCCCC-cccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEe
Confidence 99999999997542111 11123479999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhc-----CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCC
Q 025707 163 SEASPDTIRRAHAV-----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (249)
Q Consensus 163 s~~~~~~l~~~~~~-----~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~ 225 (249)
|||++++++++.+. .+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++..
T Consensus 189 Sn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~G~Ltg~~~~ 256 (353)
T 3erp_A 189 SNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYLN 256 (353)
T ss_dssp ESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGGGTSSGGGTC
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEeccccccccCCCccC
Confidence 99999999988764 6899999999999987668899999999999999999999999998543
|
| >4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-53 Score=364.94 Aligned_cols=223 Identities=24% Similarity=0.271 Sum_probs=188.8
Q ss_pred ccCCceecCCCCcccCcceeecccccC--------CCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHH
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSG--------CYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKAL 78 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~--------~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l 78 (249)
..|+||+||++|++||+||||||++++ .|+. .+++++.++|+.|++.|||+||||+.|| .+|+.+|++|
T Consensus 28 ~~m~~r~Lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~sE~~lG~al 104 (292)
T 4exb_A 28 LHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTI-PDDREAADLLALARDLGINLIDTAPAYG--RSEERLGPLL 104 (292)
T ss_dssp STTCCEECTTSSCEECSEEEECSTTTCC---------CC-CCHHHHHHHHHHHHHTTCCEEECCTTST--THHHHHHHHH
T ss_pred CCceeeecCCCCCccCCEeEcccccCCCcccccccccCC-CCHHHHHHHHHHHHHcCCCEEEcCCccc--hHHHHHHHHh
Confidence 368999999999999999999999986 3443 4889999999999999999999999998 8999999999
Q ss_pred HcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecC--CCCCCHH-HHHHHHHHHHHcC
Q 025707 79 KELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRV--DTSVPIE-ETIGEMKKLVEEG 155 (249)
Q Consensus 79 ~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~--~~~~~~~-~~~~~l~~l~~~G 155 (249)
+. +|++++|+||++..... +....+.+++.+++++++||++||+||||+|++|+| +...+.+ ++|++|++|+++|
T Consensus 105 ~~-~R~~v~I~TK~~~~~~~-~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~G 182 (292)
T 4exb_A 105 RG-QREHWVIVSKVGEEFVD-GQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREG 182 (292)
T ss_dssp TT-TGGGCEEEEEESBC--C-CSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTT
T ss_pred cc-CCCcEEEEEeeccccCC-CCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHCC
Confidence 95 89999999999864321 112345789999999999999999999999999999 4434445 8999999999999
Q ss_pred CeeEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccc
Q 025707 156 KIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235 (249)
Q Consensus 156 ~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~ 235 (249)
+||+||||||++++++++++. ++++|++||++++.. .+++++|+++||+|++|+||++|+|+++ ...
T Consensus 183 kir~iGvSn~~~~~l~~~~~~--~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a~spL~~G~L~~~----------~g~ 249 (292)
T 4exb_A 183 LIGAYGLSGKTVEGGLRALRE--GDCAMVTYNLNERAE-RPVIEYAAAHAKGILVKKALASGHACLG----------AGQ 249 (292)
T ss_dssp SEEEEEEECSSHHHHHHHHHH--SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEEECCSCC------------------C
T ss_pred CceEEEeCCCCHHHHHHHHHh--hcEEeeccccccCCH-HHHHHHHHHCCcEEEEeccccCCccCCC----------CCC
Confidence 999999999999999999887 899999999999875 7899999999999999999999999765 344
Q ss_pred cCCCcceeeeee
Q 025707 236 CFSSISVSFCFI 247 (249)
Q Consensus 236 ~~~~~~~~~~~~ 247 (249)
+.++++++|++.
T Consensus 250 t~aqvaL~w~l~ 261 (292)
T 4exb_A 250 DPVRASFELVFD 261 (292)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 556788888764
|
| >3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-52 Score=367.46 Aligned_cols=213 Identities=30% Similarity=0.484 Sum_probs=190.8
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCC
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~ 84 (249)
..| ||+||++|++||+||||||+. ||...+++++.++|+.|+++|||+||||+.||+|.+|+.||++|+. .+|+
T Consensus 36 ~~m-yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~ 111 (367)
T 3lut_A 36 LQF-YRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRS 111 (367)
T ss_dssp CCS-EEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGG
T ss_pred hhc-eeecCCCCCcccceeECCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCc
Confidence 468 999999999999999999842 4445688999999999999999999999999988999999999987 4799
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
+++|+||+++... .....+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++|+||+|||||
T Consensus 112 ~v~I~TK~~~~~~--~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~iGvSn 189 (367)
T 3lut_A 112 SLVITTKIFWGGK--AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSR 189 (367)
T ss_dssp GCEEEEEESBCCS--SGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred eEEEEeccccCCC--CccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeEEEecC
Confidence 9999999965321 11234578999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhc------CCceEEeeecCccccch-hhhHHHHHHHhCCcEEecccCcccccCCCCCC
Q 025707 165 ASPDTIRRAHAV------HPITAVQLEWSLWARDI-ENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (249)
Q Consensus 165 ~~~~~l~~~~~~------~~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~ 225 (249)
|+++++++++.. .+++++|++||++++.. +.+++++|+++||+|++|+||++|+|+|++..
T Consensus 190 ~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk~~~ 257 (367)
T 3lut_A 190 WSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 257 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTTTTT
T ss_pred CCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEecccccccccCCcCC
Confidence 999999888653 57999999999999875 45899999999999999999999999999653
|
| >1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-51 Score=360.45 Aligned_cols=218 Identities=27% Similarity=0.388 Sum_probs=187.3
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcC-------CCchHHHHHHHHHc-
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG-------PYTNEILLGKALKE- 80 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg-------~g~se~~lg~~l~~- 80 (249)
|+||+||++|++||+||||||++|+ ..+++++.++|+.|+++|||+||||+.|| .|.+|+.||++|+.
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~ 76 (346)
T 1lqa_A 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH 76 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH
T ss_pred CCeeecCCCCCeecCeeEEccccCC----CCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc
Confidence 7899999999999999999998764 34789999999999999999999999996 67999999999986
Q ss_pred CCCCCeEEEecccccccC---CcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCC---------------C--CCC
Q 025707 81 LPRENIQVATKFGFVELG---FTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVD---------------T--SVP 140 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~---~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~---------------~--~~~ 140 (249)
.+|++++|+||++..... +.....+.+++.+++++++||+|||+||||+|++|||. . ..+
T Consensus 77 ~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~ 156 (346)
T 1lqa_A 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_dssp CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC
T ss_pred CCCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCC
Confidence 479999999999743110 00001247899999999999999999999999999993 3 457
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc------CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccC
Q 025707 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV------HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~------~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl 214 (249)
++++|++|++|+++|+||+||||||+.++++++... .+++++|++||++++..+.+++++|+++||+|++|+||
T Consensus 157 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL 236 (346)
T 1lqa_A 157 LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecch
Confidence 899999999999999999999999999888776532 46999999999999976688999999999999999999
Q ss_pred cccccCCCCCCCCCCC
Q 025707 215 GRGFFGGKAVVESVPL 230 (249)
Q Consensus 215 ~~G~l~g~~~~~~~~~ 230 (249)
++|+|++++.....|+
T Consensus 237 ~~G~L~g~~~~~~~p~ 252 (346)
T 1lqa_A 237 GFGTLTGKYLNGAKPA 252 (346)
T ss_dssp GGGGGGTTTGGGCCCT
T ss_pred hhhhhcCccccccCCC
Confidence 9999999854333333
|
| >1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-51 Score=356.03 Aligned_cols=236 Identities=23% Similarity=0.320 Sum_probs=200.2
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCC
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~ 85 (249)
.|++++||+++++||+||||||++|+ |+ .+++++.++|+.|++.|||+||||+.||.|.+|+.+|++|++ .+|++
T Consensus 22 ~M~~~~Lg~~~~~vs~lglGt~~~g~-~~--~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~ 98 (319)
T 1ur3_M 22 LVQRITIAPQGPEFSRFVMGYWRLMD-WN--MSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRER 98 (319)
T ss_dssp CCCEEECSTTCCEEESSEEECTTTTT-TT--CCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTT
T ss_pred hCceEECCCCCcccccccEeccccCC-CC--CCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCe
Confidence 48999999999999999999999987 52 478999999999999999999999999999999999999986 46999
Q ss_pred eEEEecccccccCC---cccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 025707 86 IQVATKFGFVELGF---TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 162 (249)
Q Consensus 86 ~~I~tK~~~~~~~~---~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 162 (249)
++|+||++...... .....+.+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++|+||+|||
T Consensus 99 v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGv 178 (319)
T 1ur3_M 99 MEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGV 178 (319)
T ss_dssp CEEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEE
T ss_pred EEEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEe
Confidence 99999998642110 011235789999999999999999999999999999988889999999999999999999999
Q ss_pred CCCCHHHHHHHhhcC--CceEEeeecCccccch-hhhHHHHHHHhCCcEEecccCcccccCCCCC-------CCCCCCCc
Q 025707 163 SEASPDTIRRAHAVH--PITAVQLEWSLWARDI-ENEIVPLCRELGIGIVPYCPLGRGFFGGKAV-------VESVPLDS 232 (249)
Q Consensus 163 s~~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~-------~~~~~~~~ 232 (249)
|||++++++++.+.. +++++|++||++++.. +.+++++|+++||++++|+||++|.|..... ...++ ..
T Consensus 179 Sn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~G~L~~~~~~~~~~~~l~~ia-~~ 257 (319)
T 1ur3_M 179 SNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDYFQPLRDELAVVA-EE 257 (319)
T ss_dssp ESCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSCGGGHHHHHHHHHHH-HH
T ss_pred cCCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccCccccCCchhHHHHHHHHHHH-HH
Confidence 999999999988763 7999999999999875 3679999999999999999999999864200 00011 12
Q ss_pred ccccC-CCcceeeeee
Q 025707 233 FLVCF-SSISVSFCFI 247 (249)
Q Consensus 233 ~~~~~-~~~~~~~~~~ 247 (249)
+..+. ++++++|++.
T Consensus 258 ~g~t~~aqvaL~w~l~ 273 (319)
T 1ur3_M 258 LNAGSIEQVVNAWVLR 273 (319)
T ss_dssp TTCSCHHHHHHHHHHT
T ss_pred cCCChHHHHHHHHHHh
Confidence 33344 6778888764
|
| >3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-51 Score=350.10 Aligned_cols=218 Identities=24% Similarity=0.349 Sum_probs=191.1
Q ss_pred cccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCC
Q 025707 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPR 83 (249)
Q Consensus 6 ~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r 83 (249)
.+.|++++|+ +|++||.||||||+++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|+. .+|
T Consensus 3 ~~~m~~~~L~-~g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~G~~~~DTA~~Yg---~E~~lG~al~~~~~~R 71 (276)
T 3f7j_A 3 TSLKDTVKLH-NGVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVAR 71 (276)
T ss_dssp SSTTCEEECT-TSCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHCSCG
T ss_pred cCCcceEECC-CCCEecceeecCCcCC-------CHHHHHHHHHHHHHcCCCEEECcCccc---CHHHHHHHHhhcCCCc
Confidence 4679999996 8999999999999864 468899999999999999999999999 79999999985 589
Q ss_pred CCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 025707 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (249)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 163 (249)
++++|+||++... .+++.+++++++||++||+||||+|++|+|+... .+++|++|++|+++|+||+||||
T Consensus 72 ~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~-~~~~~~~l~~l~~~Gkir~iGvS 141 (276)
T 3f7j_A 72 EELFITSKVWNED---------QGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVS 141 (276)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSS-HHHHHHHHHHHHHTTSEEEEEEE
T ss_pred ccEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCc-HHHHHHHHHHHHHcCCccEEEec
Confidence 9999999997543 5799999999999999999999999999998755 89999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCcc
Q 025707 164 EASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSIS 241 (249)
Q Consensus 164 ~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~ 241 (249)
||++++++++++. .++.++|++||++.+. .+++++|+++||++++|+||++|.|........+++ .+..+.++++
T Consensus 142 n~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~~~l~~ia~-~~g~t~aqva 218 (276)
T 3f7j_A 142 NFQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQLLDNEVLTQIAE-KHNKSVAQVI 218 (276)
T ss_dssp SCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGTTTTCHHHHHHHH-HHTCCHHHHH
T ss_pred cCCHHHHHHHHHhcCCCceeeeeeeccccCC--HHHHHHHHHCCCEEEEecCCCCCccCCCHHHHHHHH-HhCCCHHHHH
Confidence 9999999999876 4567999999999874 789999999999999999999998876533233333 4556667888
Q ss_pred eeeeee
Q 025707 242 VSFCFI 247 (249)
Q Consensus 242 ~~~~~~ 247 (249)
++|++.
T Consensus 219 l~w~l~ 224 (276)
T 3f7j_A 219 LRWDLQ 224 (276)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888764
|
| >3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-51 Score=352.16 Aligned_cols=216 Identities=23% Similarity=0.433 Sum_probs=191.3
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCC
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~ 84 (249)
+.|+|++|| |++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 22 ~~m~~~~l~--g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~ 88 (298)
T 3up8_A 22 SMMHAVSSN--GANIPALGFGTFRM--------SGAEVLRILPQALKLGFRHVDTAQIYG---NEAEVGEAIQKSGIPRA 88 (298)
T ss_dssp GSCCEECCT--TCCEESEEEECTTC--------CHHHHHHHHHHHHHHTCCEEECCTTTT---CHHHHHHHHHHHTCCGG
T ss_pred ccCceEEeC--CeecCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHcCCChH
Confidence 468999997 99999999999975 358899999999999999999999999 89999999987 5899
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
+++|+||++.. +.+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++|+||+|||||
T Consensus 89 ~v~I~TK~~~~---------~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 159 (298)
T 3up8_A 89 DVFLTTKVWVD---------NYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISN 159 (298)
T ss_dssp GCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred HEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEEEcC
Confidence 99999999754 367999999999999999999999999999999889999999999999999999999999
Q ss_pred CCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCcce
Q 025707 165 ASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSISV 242 (249)
Q Consensus 165 ~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~~ 242 (249)
|++++++++++.. +++++|++||++.+. .+++++|+++||++++|+||++|.|........+++ .+..+.+++++
T Consensus 160 ~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~~~l~~ia~-~~g~s~aqvaL 236 (298)
T 3up8_A 160 FNTTQMEEAARLSDAPIATNQVEYHPYLDQ--TKVLQTARRLGMSLTSYYAMANGKVPADPLLTEIGG-RHGKTAAQVAL 236 (298)
T ss_dssp CCHHHHHHHHHHCSSCEEEEEEECBTTBCC--HHHHHHHHHHTCEEEEECTTGGGHHHHCHHHHHHHH-HHTCCHHHHHH
T ss_pred CCHHHHHHHHHhCCCCceEEEEeccccccc--HHHHHHHHHCCCEEEEECCCcCCcccccchHHHHHH-HcCCCHHHHHH
Confidence 9999999998774 799999999999874 789999999999999999999998765532222222 44556667888
Q ss_pred eeeee
Q 025707 243 SFCFI 247 (249)
Q Consensus 243 ~~~~~ 247 (249)
+|++.
T Consensus 237 ~w~l~ 241 (298)
T 3up8_A 237 RWLVQ 241 (298)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 88764
|
| >3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-51 Score=349.12 Aligned_cols=216 Identities=28% Similarity=0.399 Sum_probs=189.2
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCC
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~ 85 (249)
+|++++| ++|++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|++
T Consensus 25 ~m~~~~L-~~g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~ 92 (283)
T 3o0k_A 25 TVPTVKL-NDGNHIPQLGYGVWQI--------SNDEAVSAVSEALKAGYRHIDTATIYG---NEEGVGKAINGSGIARAD 92 (283)
T ss_dssp CCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHTSSSCGGG
T ss_pred CCceEEC-CCCCEECCeeEECccC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCCccc
Confidence 6999999 7899999999999975 568999999999999999999999999 69999999996 47999
Q ss_pred eEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-CCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 86 ~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
++|+||++... .+++.+++++++||+|||+||||+|++|||+.. .+.+++|++|++|+++|+||+|||||
T Consensus 93 ~~i~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn 163 (283)
T 3o0k_A 93 IFLTTKLWNSD---------QGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVSN 163 (283)
T ss_dssp CEEEEEECGGG---------CSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred EEEEEccCCCC---------CCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceEEecc
Confidence 99999998643 568999999999999999999999999999876 46789999999999999999999999
Q ss_pred CCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCcce
Q 025707 165 ASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSISV 242 (249)
Q Consensus 165 ~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~~ 242 (249)
|++++++++++. .++.++|++||++.+. .+++++|+++||++++|+||++|.|...+....+++ .+..+.+++++
T Consensus 164 ~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~~~l~~ia~-~~g~t~aqvaL 240 (283)
T 3o0k_A 164 FRTADLERLIKESGVTPVLNQIELHPQFQQ--DELRLFHGKHDIATEAWSPLGQGKLLEDPTLKSIAE-KHAKSVAQIIL 240 (283)
T ss_dssp CCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC-CTTCHHHHHHHH-HHTSCHHHHHH
T ss_pred CcHHHHHHHHHhCCCCeEEEEeecCcccCc--HHHHHHHHHCCcEEEEecCCCCCccccchHHHHHHH-HhCCCHHHHHH
Confidence 999999998875 4568999999999874 689999999999999999999998876533233332 45566678888
Q ss_pred eeeee
Q 025707 243 SFCFI 247 (249)
Q Consensus 243 ~~~~~ 247 (249)
+|++.
T Consensus 241 ~w~l~ 245 (283)
T 3o0k_A 241 RWHIE 245 (283)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88753
|
| >1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-50 Score=347.72 Aligned_cols=219 Identities=23% Similarity=0.341 Sum_probs=189.3
Q ss_pred ccccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CC
Q 025707 5 KKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LP 82 (249)
Q Consensus 5 ~~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~ 82 (249)
.|..|++++| ++|++||.||||||+++ +++++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+
T Consensus 5 ~~~~m~~~~l-~~g~~v~~lglGt~~~~-------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~ 73 (281)
T 1vbj_A 5 FMALTQSLKL-SNGVMMPVLGFGMWKLQ-------DGNEAETATMWAIKSGYRHIDTAAIYK---NEESAGRAIASCGVP 73 (281)
T ss_dssp TTCCCCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSSSC
T ss_pred cCCCCceEEC-CCCCeecCeeEECCcCC-------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhcCCC
Confidence 4667999999 89999999999999864 357899999999999999999999999 79999999986 57
Q ss_pred CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 025707 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 162 (249)
Q Consensus 83 r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 162 (249)
|++++|+||++.. +.+++.+++++++||++||+||||+|++|||+ ..+..++|++|++|+++|+||+|||
T Consensus 74 R~~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~~~~~~~~al~~l~~~Gkir~iGv 143 (281)
T 1vbj_A 74 REELFVTTKLWNS---------DQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KDKFIDTWKAFEKLYADKKVRAIGV 143 (281)
T ss_dssp GGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SSCHHHHHHHHHHHHHTTSBSCEEE
T ss_pred hhHEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CCCHHHHHHHHHHHHHCCCccEEEe
Confidence 9999999999753 36799999999999999999999999999998 6778999999999999999999999
Q ss_pred CCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCc
Q 025707 163 SEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSI 240 (249)
Q Consensus 163 s~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~ 240 (249)
|||++++++++++. .+++++|++||++++. .+++++|+++||++++|+||++|.+........+++ .+..+.+++
T Consensus 144 Sn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~~~~~l~~ia~-~~g~s~aqv 220 (281)
T 1vbj_A 144 SNFHEHHIEELLKHCKVAPMVNQIELHPLLNQ--KALCEYCKSKNIAVTAWSPLGQGHLVEDARLKAIGG-KYGKTAAQV 220 (281)
T ss_dssp ESCCHHHHHHHHTSCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGTTTTCHHHHHHHH-TTTCCHHHH
T ss_pred eCCCHHHHHHHHHhCCCCceeeeEEeccccCC--HHHHHHHHHcCCEEEEecCCcCCCCCCCHHHHHHHH-HhCCCHHHH
Confidence 99999999999886 4568999999999875 679999999999999999999995433211112222 344566788
Q ss_pred ceeeeee
Q 025707 241 SVSFCFI 247 (249)
Q Consensus 241 ~~~~~~~ 247 (249)
+++|++.
T Consensus 221 aL~w~l~ 227 (281)
T 1vbj_A 221 MLRWEIQ 227 (281)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888764
|
| >2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=347.20 Aligned_cols=217 Identities=23% Similarity=0.358 Sum_probs=186.7
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCC
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~ 84 (249)
.+|++++| ++|++||.||||||+++ .+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 9 ~~m~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~v~~Al~~Gi~~iDTA~~Yg---~E~~lG~al~~~~~~R~ 76 (283)
T 2wzm_A 9 AAIPTVTL-NDDNTLPVVGIGVGELS--------DSEAERSVSAALEAGYRLIDTAAAYG---NEAAVGRAIAASGIPRD 76 (283)
T ss_dssp -CCCEEEC-TTSCEEESEEEECTTCC--------HHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHTCCCGG
T ss_pred CCCceEEC-CCCCEEcceeEECCCCC--------hHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHhcCCCcc
Confidence 57999999 99999999999999753 47899999999999999999999999 79999999986 5799
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-CCHHHHHHHHHHHHHcCCeeEEEcC
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLS 163 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvs 163 (249)
+++|+||++.. +.+++.+++++++||++||+||||+|++|||+.. .+..++|++|++|+++|+||+||||
T Consensus 77 ~v~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvS 147 (283)
T 2wzm_A 77 EIYVTTKLATP---------DQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGVC 147 (283)
T ss_dssp GCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred cEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEEc
Confidence 99999999753 3679999999999999999999999999999874 4678999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCcc
Q 025707 164 EASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSIS 241 (249)
Q Consensus 164 ~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~ 241 (249)
||++++++++++. .+++++|++||++++. .+++++|+++||++++|+||++|.+........+++ .+..+.++++
T Consensus 148 n~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~~~l~~ia~-~~g~s~aqva 224 (283)
T 2wzm_A 148 NFGAEDLETIVSLTYFTPAVNQIELHPLLNQ--AALREVNAGYNIVTEAYGPLGVGRLLDHPAVTAIAE-AHGRTAAQVL 224 (283)
T ss_dssp SCCHHHHHHHHHHHCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTTGGGGCHHHHHHHH-HHTCCHHHHH
T ss_pred CCCHHHHHHHHHhcCCCcccccccCCcccCC--HHHHHHHHHCCCEEEEecCCCCCcccchHHHHHHHH-HhCCCHHHHH
Confidence 9999999998876 4569999999999875 579999999999999999999996543321122222 3445666788
Q ss_pred eeeeee
Q 025707 242 VSFCFI 247 (249)
Q Consensus 242 ~~~~~~ 247 (249)
++|++.
T Consensus 225 L~w~l~ 230 (283)
T 2wzm_A 225 LRWSIQ 230 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888753
|
| >4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-50 Score=346.98 Aligned_cols=218 Identities=22% Similarity=0.352 Sum_probs=189.6
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCC
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~ 84 (249)
.+.++.+| ++|++||.||||||+++. .+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 8 ~~~~~~~l-~~g~~v~~lglGt~~~~~-------~~~~~~~v~~Al~~G~~~~DTA~~Yg---~E~~vG~al~~~~~~R~ 76 (288)
T 4f40_A 8 VDKAMVTL-SNGVKMPQFGLGVWQSPA-------GEVTENAVKWALCAGYRHIDTAAIYK---NEESVGAGLRASGVPRE 76 (288)
T ss_dssp TTTCEEEC-TTSCEEESBCEECTTCCT-------THHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHTCCGG
T ss_pred ccCCeEEC-CCCCeecceeEECCcCCC-------cHHHHHHHHHHHHcCCCeEECccccc---CHHHHHHHHHhcCCChh
Confidence 45678888 889999999999998764 37899999999999999999999999 89999999986 5899
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-------CCHHHHHHHHHHHHHcCCe
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-------VPIEETIGEMKKLVEEGKI 157 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-------~~~~~~~~~l~~l~~~G~i 157 (249)
+++|+||++... .+++.+++++++||+|||+||||+|++|+|+.. .+.+++|++|++|+++|+|
T Consensus 77 ~~~I~TK~~~~~---------~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gki 147 (288)
T 4f40_A 77 DVFITTKLWNTE---------QGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKV 147 (288)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSE
T ss_pred hEEEEEecCCCc---------CCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCc
Confidence 999999998643 578999999999999999999999999999863 5678999999999999999
Q ss_pred eEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccc
Q 025707 158 KYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235 (249)
Q Consensus 158 r~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~ 235 (249)
|+||||||++++++++++. .+++++|++||++++. .+++++|+++||++++|+||++|.|++.+....+++ .+..
T Consensus 148 r~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~~~l~~ia~-~~g~ 224 (288)
T 4f40_A 148 RAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVEAWSPLGQGKLLSNPILSAIGA-KYNK 224 (288)
T ss_dssp EEEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTC--CGGGCHHHHHHHH-HHTC
T ss_pred cEEEeccCCHHHHHHHHHhCCCCCeEEeccCccccCC--HHHHHHHHHCCCEEEEecCCCCCcccccHHHHHHHH-HhCC
Confidence 9999999999999999876 4689999999999885 679999999999999999999999887633333333 4556
Q ss_pred cCCCcceeeeee
Q 025707 236 CFSSISVSFCFI 247 (249)
Q Consensus 236 ~~~~~~~~~~~~ 247 (249)
+.++++++|++.
T Consensus 225 t~aqvaL~w~l~ 236 (288)
T 4f40_A 225 TAAQVILRWNIQ 236 (288)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 777888888764
|
| >1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=346.06 Aligned_cols=215 Identities=23% Similarity=0.314 Sum_probs=180.8
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCe
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENI 86 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~ 86 (249)
|++++| ++|++||.||||||+++ .+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|+++
T Consensus 3 M~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~~ 70 (278)
T 1hw6_A 3 VPSIVL-NDGNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDDL 70 (278)
T ss_dssp CCEEEC-TTSCEEESBCEECCSCC--------GGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGGGC
T ss_pred CceEEC-CCCCccCCeeEECCcCC--------hHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCChhhE
Confidence 899999 89999999999999864 36789999999999999999999999 79999999986 589999
Q ss_pred EEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-CCCHHHHHHHHHHHHHcCCeeEEEcCCC
Q 025707 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLSEA 165 (249)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs~~ 165 (249)
+|+||++.. +.+++.+++++++||++||+||||+|++|||+. ..+.+++|++|++|+++|+||+||||||
T Consensus 71 ~i~TK~~~~---------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~ 141 (278)
T 1hw6_A 71 FITTKLWND---------RHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNH 141 (278)
T ss_dssp EEEEEECCC--------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred EEEEeeCCC---------CCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCC
Confidence 999999753 356889999999999999999999999999987 4678999999999999999999999999
Q ss_pred CHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc--cCCCCCCCCCCCCcccccCCCcc
Q 025707 166 SPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF--FGGKAVVESVPLDSFLVCFSSIS 241 (249)
Q Consensus 166 ~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~--l~g~~~~~~~~~~~~~~~~~~~~ 241 (249)
++++++++++. .+++++|++||++++. .+++++|+++||++++|+||++|. +...+....+++ .+..+.++++
T Consensus 142 ~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~~~~~~~~~l~~ia~-~~g~s~aqva 218 (278)
T 1hw6_A 142 LVPHLERIVAATGVVPAVNQIELHPAYQQ--REITDWAAAHDVKIESWGPLGQGKYDLFGAEPVTAAAA-AHGKTPAQAV 218 (278)
T ss_dssp CHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGSSCCTTSHHHHHHHH-HHTCCHHHHH
T ss_pred CHHHHHHHHHhcCCCceeEEEEeCcccCC--HHHHHHHHHcCCEEEEeccccCCCccccccHHHHHHHH-HhCCCHHHHH
Confidence 99999998876 4569999999999885 689999999999999999999993 211111111111 3345566788
Q ss_pred eeeeee
Q 025707 242 VSFCFI 247 (249)
Q Consensus 242 ~~~~~~ 247 (249)
++|++.
T Consensus 219 L~w~l~ 224 (278)
T 1hw6_A 219 LRWHLQ 224 (278)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888753
|
| >3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-48 Score=339.01 Aligned_cols=194 Identities=25% Similarity=0.375 Sum_probs=175.9
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------ 80 (249)
.+|++++| ++|++||.||||||+++. .+.+++.++|+.|+++|||+||||+.|| +|+.+|++|++
T Consensus 4 ~~m~~~~L-~tg~~v~~lglGt~~~~~-----~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~ 74 (324)
T 3ln3_A 4 SXQHCVXL-NDGHLIPALGFGTYXPXE-----VPXSXSLEAACLALDVGYRHVDTAYAYQ---VEEEIGQAIQSXIXAGV 74 (324)
T ss_dssp --CCEEEC-TTSCEEESSEEECCCCTT-----SCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred cCCceEEC-CCCCCcCCeeecCCcccC-----CChHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhccCC
Confidence 46999999 899999999999998752 4789999999999999999999999999 79999999986
Q ss_pred CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCH
Q 025707 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPI 141 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~ 141 (249)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..++
T Consensus 75 ~~R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (324)
T 3ln3_A 75 VXREDLFVTTKLWCTC---------FRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDF 145 (324)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCH
T ss_pred cccceeEEEeeeCCcc---------CCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCH
Confidence 4899999999997543 67999999999999999999999999999975 3468
Q ss_pred HHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccc
Q 025707 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 142 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G 217 (249)
+++|++|++|+++|+||+||||||++++++++++.. ++.++|++||++.+ +.+++++|+++||+|++|+||++|
T Consensus 146 ~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~g 223 (324)
T 3ln3_A 146 CDTWERLEECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLN--QRXLLDYCESXDIVLVAYGALGTQ 223 (324)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTSCC
T ss_pred HHHHHHHHHHHhcCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccc--hHHHHHHHHHcCCEEEEecCCCCC
Confidence 999999999999999999999999999999998773 27799999999876 378999999999999999999999
Q ss_pred ccC
Q 025707 218 FFG 220 (249)
Q Consensus 218 ~l~ 220 (249)
.+.
T Consensus 224 ~~~ 226 (324)
T 3ln3_A 224 RYX 226 (324)
T ss_dssp CCT
T ss_pred Ccc
Confidence 864
|
| >3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=342.14 Aligned_cols=195 Identities=25% Similarity=0.347 Sum_probs=176.3
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------ 80 (249)
..|++++| ++|++||.||||||++++ ..+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 5 ~~~~~~~L-~tg~~v~~lglGt~~~g~----~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 76 (326)
T 3buv_A 5 AASHRIPL-SDGNSIPIIGLGTYSEPK----STPKGACATSVKVAIDTGYRHIDGAYIYQ---NEHEVGEAIREKIAEGK 76 (326)
T ss_dssp SSCCEEEC-TTSCEEESBCEECCCCGG----GCCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEC-CCCCeeCCeeEcccCCCC----CCCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCC
Confidence 35789999 899999999999999874 23678899999999999999999999999 79999999986
Q ss_pred CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCH
Q 025707 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPI 141 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~ 141 (249)
.+|++++|+||++.. ..+++.+++++++||++||+||||+|++|||+. ..++
T Consensus 77 ~~R~~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (326)
T 3buv_A 77 VRREDIFYCGKLWAT---------NHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNL 147 (326)
T ss_dssp CCGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCH
T ss_pred CChhHeEEEeeeCCC---------cCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccH
Confidence 479999999999753 267999999999999999999999999999964 2367
Q ss_pred HHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC--C--ceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccc
Q 025707 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--P--ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 142 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~--~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G 217 (249)
+++|++|++|+++|+||+||||||+.++++++++.. + ++++|++||++.+. .+++++|+++||+|++|+||++|
T Consensus 148 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 225 (326)
T 3buv_A 148 CATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQ--PKLLKFCQQHDIVITAYSPLGTS 225 (326)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC
T ss_pred HHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCc--HHHHHHHHHcCCEEEEeccccCC
Confidence 899999999999999999999999999999998763 4 77999999998874 68999999999999999999999
Q ss_pred ccC
Q 025707 218 FFG 220 (249)
Q Consensus 218 ~l~ 220 (249)
.|+
T Consensus 226 ~l~ 228 (326)
T 3buv_A 226 RNP 228 (326)
T ss_dssp CCT
T ss_pred ccc
Confidence 987
|
| >4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-49 Score=341.62 Aligned_cols=217 Identities=24% Similarity=0.340 Sum_probs=186.1
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCC
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~ 84 (249)
.+|+|++| ++|++||.||||||+++ +.+++.++|++|+++|||+||||+.|| +|+.+|++++. .+|+
T Consensus 11 ~~~~~v~L-n~G~~ip~lGlGtw~~~-------d~~e~~~~v~~Al~~Gin~~DTA~~Yg---sE~~vG~~l~~~~~~r~ 79 (290)
T 4gie_A 11 CNYNCVTL-HNSVRMPQLGLGVWRAQ-------DGAETANAVRWAIEAGYRHIDTAYIYS---NERGVGQGIRESGVPRE 79 (290)
T ss_dssp SSSCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHCCCGG
T ss_pred CCCCEEEc-CCCCCccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEecccccC---CHHHHHHHHHhcCCcch
Confidence 47999999 89999999999999754 467899999999999999999999999 89999999987 6899
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
+++|+||++... .+++.+++++++||+|||+||||+|++|+|+. .+..++|++|++|+++||||+||+||
T Consensus 80 ~~~i~tk~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~-~~~~e~~~al~~l~~~Gkir~iGvSn 149 (290)
T 4gie_A 80 EVWVTTKVWNSD---------QGYEKTLAAFERSRELLGLEYIDLYLIHWPGK-KKFVDTWKALEKLYEEKKVRAIGVSN 149 (290)
T ss_dssp GSEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCS-SSHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred hccccccccccC---------CChHHHHHHHHHHHHHhCCCceeeEEecCCCC-CcchHHHHHHHHHHHCCCcceeeecC
Confidence 999999997654 57899999999999999999999999999876 56889999999999999999999999
Q ss_pred CCHHHHHHHhhcCC--ceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCC---CCCCCcccccCCC
Q 025707 165 ASPDTIRRAHAVHP--ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVE---SVPLDSFLVCFSS 239 (249)
Q Consensus 165 ~~~~~l~~~~~~~~--~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~---~~~~~~~~~~~~~ 239 (249)
+++++++++..... +.++|+++++..+ ..+++++|+++||++++|+||++|.|+++.... .++ ..+..+.++
T Consensus 150 ~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a~spl~~G~l~~~~~~~~l~~iA-~~~g~t~aq 226 (290)
T 4gie_A 150 FEPHHLTELFKSCKIRPMVNQVELHPLFQ--QRTLREFCKQHNIAITAWSPLGSGEEAGILKNHVLGEIA-KKHNKSPAQ 226 (290)
T ss_dssp CCHHHHHHHHTTCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCSSGGGCGGGCHHHHHHH-HHHTCCHHH
T ss_pred CCHHHHHHHHHhccCCCceeeEeccccch--hHHHHHHHHHcCceEeeecccccccccccchhHHHHHHH-HHhCCCHHH
Confidence 99999999988754 4455655555444 588999999999999999999999998874322 122 244556678
Q ss_pred cceeeeee
Q 025707 240 ISVSFCFI 247 (249)
Q Consensus 240 ~~~~~~~~ 247 (249)
++++|++.
T Consensus 227 vaL~w~l~ 234 (290)
T 4gie_A 227 VVIRWDIQ 234 (290)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888763
|
| >1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-48 Score=337.47 Aligned_cols=195 Identities=28% Similarity=0.416 Sum_probs=176.3
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------ 80 (249)
.+|++++| ++|++||+||||||++|. .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 3 ~~~~~~~L-~tg~~v~~lglGt~~~g~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 73 (323)
T 1afs_A 3 SISLRVAL-NDGNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDGT 73 (323)
T ss_dssp GGGCEEEC-TTSCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTTS
T ss_pred CCCceEEC-CCCCeECCeeEecccCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHHhcCC
Confidence 35899999 799999999999998753 3668899999999999999999999999 79999999986
Q ss_pred CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCH
Q 025707 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPI 141 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~ 141 (249)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..++
T Consensus 74 ~~R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~ 144 (323)
T 1afs_A 74 VKREDIFYTSKLWSTF---------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDI 144 (323)
T ss_dssp CCGGGCEEEEEECGGG---------CSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCH
T ss_pred CChHHeEEEEecCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCH
Confidence 4899999999997532 56889999999999999999999999999942 2367
Q ss_pred HHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccc
Q 025707 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 142 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G 217 (249)
+++|++|++|+++|+||+||||||+.++++++++.. +++++|++||++.+. .+++++|+++||+|++|+||++|
T Consensus 145 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 222 (323)
T 1afs_A 145 CDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ--SKMLDYCKSKDIILVSYCTLGSS 222 (323)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCC
T ss_pred HHHHHHHHHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccch--HHHHHHHHHcCCEEEEecCccCC
Confidence 899999999999999999999999999999998863 569999999998874 68999999999999999999999
Q ss_pred ccCC
Q 025707 218 FFGG 221 (249)
Q Consensus 218 ~l~g 221 (249)
.|++
T Consensus 223 ~l~~ 226 (323)
T 1afs_A 223 RDKT 226 (323)
T ss_dssp CCTT
T ss_pred cccc
Confidence 9875
|
| >1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-48 Score=338.34 Aligned_cols=195 Identities=26% Similarity=0.332 Sum_probs=176.4
Q ss_pred ccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCeEEEeccccccc
Q 025707 20 EVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVEL 97 (249)
Q Consensus 20 ~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~~I~tK~~~~~~ 97 (249)
.+|+||||||++|+ ..+++++.++|+.|++.|||+||||+.||.|.+|+.||++|+. ..|++++|+||++...
T Consensus 4 ~~~~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~- 78 (327)
T 1gve_A 4 ARPATVLGAMEMGR----RMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMF- 78 (327)
T ss_dssp CCCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCT-
T ss_pred CCCCeEEcccccCC----CCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCC-
Confidence 47899999999875 1478999999999999999999999999888999999999975 2478899999996432
Q ss_pred CCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc-
Q 025707 98 GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV- 176 (249)
Q Consensus 98 ~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~- 176 (249)
..+.+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++|+||+||||||+.++++++.+.
T Consensus 79 -----~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 153 (327)
T 1gve_A 79 -----GKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLC 153 (327)
T ss_dssp -----TCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence 12468999999999999999999999999999999889999999999999999999999999999999887654
Q ss_pred -----CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCC
Q 025707 177 -----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (249)
Q Consensus 177 -----~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~ 224 (249)
.+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++.
T Consensus 154 ~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~ 206 (327)
T 1gve_A 154 KKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGRYK 206 (327)
T ss_dssp HHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCCC
T ss_pred HHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEecccccccccCccc
Confidence 568999999999999776789999999999999999999999999843
|
| >1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-48 Score=337.39 Aligned_cols=221 Identities=25% Similarity=0.385 Sum_probs=185.1
Q ss_pred ccccCCcee-cCC-CCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--
Q 025707 5 KKLQVPRVK-LGT-QGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-- 80 (249)
Q Consensus 5 ~~~~m~~~~-lg~-~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-- 80 (249)
.+.+|++++ ||+ +|++||+|||||++++. +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 2 ~~~~m~~~~~l~~~tg~~v~~lglGt~~~~~------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---sE~~vG~al~~~~ 72 (312)
T 1zgd_A 2 GSVEIPTKVLTNTSSQLKMPVVGMGSAPDFT------CKKDTKDAIIEAIKQGYRHFDTAAAYG---SEQALGEALKEAI 72 (312)
T ss_dssp ---CCCEEECTTSTTCCEEESBCBCCSCCTT------CCSCHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHH
T ss_pred CCCCCchhhhcCCCCCCCCCceeEcCcccCC------CHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHH
Confidence 456789999 987 79999999999954322 346789999999999999999999999 89999999986
Q ss_pred ----CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC----------------CCC
Q 025707 81 ----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT----------------SVP 140 (249)
Q Consensus 81 ----~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~----------------~~~ 140 (249)
.+|++++|+||++.. +.+++.+++++++||++||+||||+|++|||+. ..+
T Consensus 73 ~~g~~~R~~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~ 143 (312)
T 1zgd_A 73 ELGLVTRDDLFVTSKLWVT---------ENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFD 143 (312)
T ss_dssp HTTSCCGGGCEEEEEECGG---------GCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCC
T ss_pred hcCCCcchheEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCcccccccccccccccc
Confidence 479999999999754 257899999999999999999999999999963 246
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc
Q 025707 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (249)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~ 218 (249)
.+++|++|++|+++|+||+||||||+.++++++++.. +++++|++||++++. .+++++|+++||+|++|+||++|.
T Consensus 144 ~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~ 221 (312)
T 1zgd_A 144 VKGVWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQ--KKLREFCNAHGIVLTAFSPVRKGA 221 (312)
T ss_dssp HHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTT
T ss_pred HHHHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCC--HHHHHHHHHcCCEEEEecCCCCCC
Confidence 8899999999999999999999999999999998873 689999999999874 689999999999999999999997
Q ss_pred cCCCCCCCCCCC-------CcccccCCCcceeeeee
Q 025707 219 FGGKAVVESVPL-------DSFLVCFSSISVSFCFI 247 (249)
Q Consensus 219 l~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 247 (249)
+.+... .+.. ..+..+.++++++|++.
T Consensus 222 ~~~~~~--~~~~~~l~~ia~~~g~s~aqvaL~w~l~ 255 (312)
T 1zgd_A 222 SRGPNE--VMENDMLKEIADAHGKSVAQISLRWLYE 255 (312)
T ss_dssp TTSSCT--TTTCHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred CCCCcc--ccccHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 654311 1111 12334556777787753
|
| >1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=334.67 Aligned_cols=189 Identities=30% Similarity=0.481 Sum_probs=172.9
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CC
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LP 82 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~ 82 (249)
+++++| ++|++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+
T Consensus 5 ~~~~~l-~~g~~vs~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~ 72 (317)
T 1qwk_A 5 TASIKL-SNGVEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVK 72 (317)
T ss_dssp CCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCC
T ss_pred cceEEC-CCCCEeCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCC
Confidence 478899 7999999999999863 678999999999999999999999999 79999999986 48
Q ss_pred CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC---------CCCHHHHHHHHHHHHH
Q 025707 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT---------SVPIEETIGEMKKLVE 153 (249)
Q Consensus 83 r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~---------~~~~~~~~~~l~~l~~ 153 (249)
|++++|+||++.. ..+++.+++++++||++||+||||+|++|||+. ..+.+++|++|++|++
T Consensus 73 R~~~~i~TK~~~~---------~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~l~~ 143 (317)
T 1qwk_A 73 REELFITTKAWTH---------ELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYK 143 (317)
T ss_dssp GGGCEEEEEECTT---------TSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHH
T ss_pred hhheEEEeeeCCC---------cCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccccccCCCHHHHHHHHHHHHH
Confidence 9999999999753 257889999999999999999999999999974 3478999999999999
Q ss_pred cCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccC
Q 025707 154 EGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220 (249)
Q Consensus 154 ~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~ 220 (249)
+|+||+||||||++++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|.|+
T Consensus 144 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~ 210 (317)
T 1qwk_A 144 AGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQ--HDHVDFCKKHNISVTSYATLGSPGRV 210 (317)
T ss_dssp TTSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCSCCEE
T ss_pred cCCeeEEEecCCCHHHHHHHHHhcCCccceecceeccccCc--HHHHHHHHHcCCEEEEecCccCCCcc
Confidence 99999999999999999999877 3579999999999874 68999999999999999999999876
|
| >1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=337.35 Aligned_cols=216 Identities=25% Similarity=0.292 Sum_probs=182.9
Q ss_pred cccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCC
Q 025707 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPR 83 (249)
Q Consensus 6 ~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r 83 (249)
...|++++| ++|++||+||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|
T Consensus 22 ~~~~~~~~L-~tg~~vs~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~R 89 (296)
T 1mzr_A 22 LANPTVIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNR 89 (296)
T ss_dssp -CCCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCG
T ss_pred CCCCceEEC-CCCCeeCCEeEECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccc---CHHHHHHHHHhcCCCc
Confidence 357899999 6899999999999975 358899999999999999999999999 79999999986 579
Q ss_pred CCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-CCCHHHHHHHHHHHHHcCCeeEEEc
Q 025707 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGL 162 (249)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGv 162 (249)
++++|+||++... . +.+++++++||+|||+||||+|++|||+. ..+.+++|++|++|+++|+||+|||
T Consensus 90 ~~v~I~TK~~~~~---------~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGv 158 (296)
T 1mzr_A 90 EELFITTKLWNDD---------H--KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGV 158 (296)
T ss_dssp GGCEEEEEECGGG---------T--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred ccEEEEeccCCCc---------H--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCEEEE
Confidence 9999999997532 2 77999999999999999999999999987 4789999999999999999999999
Q ss_pred CCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccccc--CCCCCCCCCCCCcccccCC
Q 025707 163 SEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF--GGKAVVESVPLDSFLVCFS 238 (249)
Q Consensus 163 s~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l--~g~~~~~~~~~~~~~~~~~ 238 (249)
|||++++++++++. .++.++|++||++++. .+++++|+++||++++|+||++|.+ ........+++ .+..+.+
T Consensus 159 Sn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~~~~l~~~~l~~ia~-~~g~s~a 235 (296)
T 1mzr_A 159 CNFQIHHLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLAD-KYGKTPA 235 (296)
T ss_dssp ESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTCTTTTTSHHHHHHHH-HHTCCHH
T ss_pred eCCCHHHHHHHHHhcCCCceEEeeecccccCC--HHHHHHHHHCCCeEEEeccccCCcchhcChHHHHHHHH-HhCCCHH
Confidence 99999999998865 5678999999999875 6799999999999999999999943 11111111111 3344556
Q ss_pred Ccceeeeee
Q 025707 239 SISVSFCFI 247 (249)
Q Consensus 239 ~~~~~~~~~ 247 (249)
+++++|++.
T Consensus 236 qvaL~w~l~ 244 (296)
T 1mzr_A 236 QIVIRWHLD 244 (296)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 778888753
|
| >1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=333.26 Aligned_cols=194 Identities=26% Similarity=0.376 Sum_probs=174.4
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------C
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------L 81 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~ 81 (249)
++++++| ++|++||.||||||+++. .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .
T Consensus 4 ~~~~~~L-~tg~~v~~lglGt~~~~~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~~~~ 74 (331)
T 1s1p_A 4 KQQCVKL-NDGHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSV 74 (331)
T ss_dssp --CEEEC-TTSCEEESEEEECCCCTT-----SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEC-CCCCEeCCeeEcCccCCC-----CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHhcCCC
Confidence 4688999 899999999999998653 3678899999999999999999999999 79999999986 4
Q ss_pred CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCHH
Q 025707 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIE 142 (249)
Q Consensus 82 ~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~ 142 (249)
+|++++|+||++.. ..+++.+++++++||+|||+||||+|++|||+. ..+++
T Consensus 75 ~R~~~~I~TK~~~~---------~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~ 145 (331)
T 1s1p_A 75 KREDIFYTSKLWST---------FHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLC 145 (331)
T ss_dssp CGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHH
T ss_pred CchheEEEeccCCc---------cCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCHH
Confidence 89999999999753 267999999999999999999999999999942 23678
Q ss_pred HHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc
Q 025707 143 ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (249)
Q Consensus 143 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~ 218 (249)
++|++|++|+++|+||+||||||++++++++++.. +++++|++||++.+. .+++++|+++||+|++|+||++|.
T Consensus 146 e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~ 223 (331)
T 1s1p_A 146 TTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVAYSALGSQR 223 (331)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCCC
T ss_pred HHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcCh--HHHHHHHHHcCCEEEEeccccCCc
Confidence 99999999999999999999999999999998863 669999999998874 679999999999999999999999
Q ss_pred cCC
Q 025707 219 FGG 221 (249)
Q Consensus 219 l~g 221 (249)
|++
T Consensus 224 l~~ 226 (331)
T 1s1p_A 224 DKR 226 (331)
T ss_dssp CTT
T ss_pred ccc
Confidence 875
|
| >3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=339.02 Aligned_cols=216 Identities=23% Similarity=0.390 Sum_probs=188.9
Q ss_pred CceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CCC
Q 025707 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (249)
Q Consensus 10 ~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~r 83 (249)
.+.+| ++|++||.||||||+++ +.+++.++|+.|+++|||+||||+.|| +|+.+|+++++ +.|
T Consensus 41 ~~~TL-n~G~~ip~lGlGt~~~~-------d~~e~~~~v~~Al~~Gi~~~DTA~~Yg---nE~~vG~~l~~~~~~~~i~r 109 (314)
T 3b3d_A 41 AKATL-HNGVEMPWFGLGVFQVE-------EGSELVNAVKTAIVHGYRSIDTAAIYG---NEAGVGEGIREGIEEAGISR 109 (314)
T ss_dssp CEEEC-TTSCEEESBCEECCSCC-------CSHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHHTCCG
T ss_pred CcEEC-CCcCcccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHHHHHHhCCCc
Confidence 46677 89999999999999864 357899999999999999999999999 89999999875 689
Q ss_pred CCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 025707 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (249)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 163 (249)
+++++.+|.+... .+++.+++++++||+|||+||||+|++|+|++ ....++|++|++|+++||||+||||
T Consensus 110 ~~~~i~~k~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~-~~~~e~~~al~~l~~~Gkir~iGvS 179 (314)
T 3b3d_A 110 EDLFITSKVWNAD---------LGYEETLAAFETSLSKLGLDYLDLYLIHWPVE-GKYKEAWRALETLYKEGRIKAIGVS 179 (314)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESSCCT-TTHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred ccccccccCcCCC---------CCHHHHHHHHHHHHHHhCCCcccccccccccc-cchhHHHHHHHHHHHCCCEeEEEec
Confidence 9999999997654 67999999999999999999999999999876 4578999999999999999999999
Q ss_pred CCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCCCCCCCCcccccCCCccee
Q 025707 164 EASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLVCFSSISVS 243 (249)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~~~~~~~~~~~~~~~~~ 243 (249)
||+.++++++.+..++..+|++||+..+..+.+++++|+++||++++|+||++|.|++++....+++ .+..+.++++++
T Consensus 180 n~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~G~L~~~~~~~~ia~-~~g~t~aqvaL~ 258 (314)
T 3b3d_A 180 NFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQLLDHPVLADIAQ-TYNKSVAQIILR 258 (314)
T ss_dssp SCCHHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGGGTTTTCHHHHHHHH-HTTCCHHHHHHH
T ss_pred CCchHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEEEEeccccCCcccCchhhHHHHH-HcCCCHHHHHHH
Confidence 9999999999988776666666666666556889999999999999999999999999855444444 566777788888
Q ss_pred eeee
Q 025707 244 FCFI 247 (249)
Q Consensus 244 ~~~~ 247 (249)
|++.
T Consensus 259 w~l~ 262 (314)
T 3b3d_A 259 WDLQ 262 (314)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
|
| >1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=336.05 Aligned_cols=213 Identities=24% Similarity=0.343 Sum_probs=182.0
Q ss_pred CceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CCC
Q 025707 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (249)
Q Consensus 10 ~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~r 83 (249)
..+.+|++|++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|
T Consensus 15 ~~~~~~~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R 83 (298)
T 1vp5_A 15 VPKVTLNNGVEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIVRR 83 (298)
T ss_dssp CCEEECTTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCG
T ss_pred CceEeCCCCCCccCeeEeCCcC--------ChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHhhhccCCCh
Confidence 5677899999999999999975 347899999999999999999999999 79999999984 479
Q ss_pred CCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 025707 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (249)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 163 (249)
++++|+||++.. +.+++.+++++++||++||+||||+|++|||+. +.+++|++|++|+++|+||+||||
T Consensus 84 ~~v~I~TK~~~~---------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~--~~~e~~~al~~l~~~Gkir~iGvS 152 (298)
T 1vp5_A 84 EELFVTTKLWVS---------DVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVS 152 (298)
T ss_dssp GGCEEEEEECGG---------GCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred hhEEEEeccCCC---------CCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC--CHHHHHHHHHHHHHcCCccEEEec
Confidence 999999999753 257899999999999999999999999999986 789999999999999999999999
Q ss_pred CCCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc--cCCCCCCCCCCCCcccccCCC
Q 025707 164 EASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF--FGGKAVVESVPLDSFLVCFSS 239 (249)
Q Consensus 164 ~~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~--l~g~~~~~~~~~~~~~~~~~~ 239 (249)
||++++++++++.. +++++|++||++++. .+++++|+++||++++|+||++|. +........+++ .+..+.++
T Consensus 153 n~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~~~~l~~~~l~~ia~-~~g~s~aq 229 (298)
T 1vp5_A 153 NFYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPEAWGPFAEGRKNIFQNGVLRSIAE-KYGKTVAQ 229 (298)
T ss_dssp SCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGGGGGGGCHHHHHHHH-HHTCCHHH
T ss_pred CCCHHHHHHHHHhCCCCceEEEEecccccCC--HHHHHHHHHCCCEEEEecccccCCccccCcHHHHHHHH-HhCCCHHH
Confidence 99999999998864 569999999999875 679999999999999999999993 221111111221 34455667
Q ss_pred cceeeeee
Q 025707 240 ISVSFCFI 247 (249)
Q Consensus 240 ~~~~~~~~ 247 (249)
++++|++.
T Consensus 230 vaL~w~l~ 237 (298)
T 1vp5_A 230 VILRWLTQ 237 (298)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888753
|
| >1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=328.87 Aligned_cols=190 Identities=28% Similarity=0.479 Sum_probs=172.3
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------ 80 (249)
..|++++| ++|++||+||||||+ .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 3 ~~m~~~~L-~tg~~v~~lglGt~~--------~~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 70 (322)
T 1mi3_A 3 ASIPDIKL-SSGHLMPSIGFGCWK--------LANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGL 70 (322)
T ss_dssp -CCCEEEC-TTSCEEESBCEECTT--------CCHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTS
T ss_pred CCCceEEC-CCCCEECCeeeeCCc--------CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCC
Confidence 45899999 799999999999986 2679999999999999999999999999 79999999986
Q ss_pred CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-----------------------
Q 025707 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT----------------------- 137 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~----------------------- 137 (249)
.+|++++|+||++.. ..+++.+++++++||++||+||||+|++|||+.
T Consensus 71 ~~R~~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~ 141 (322)
T 1mi3_A 71 VKREEIFLTSKLWNN---------YHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFV 141 (322)
T ss_dssp CCGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCC
T ss_pred CChhhEEEEEeeCCC---------CCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCccccccccccccccccccc
Confidence 489999999999753 267999999999999999999999999999842
Q ss_pred --CCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEeccc
Q 025707 138 --SVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 138 --~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~sp 213 (249)
..+++++|++|++|+++|+||+||||||+.++++++++. .+++++|++||++.+. .+++++|+++||++++|+|
T Consensus 142 ~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~sp 219 (322)
T 1mi3_A 142 YEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITAYSS 219 (322)
T ss_dssp BCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEECT
T ss_pred ccCCCHHHHHHHHHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCc--HHHHHHHHHcCCEEEEECC
Confidence 236789999999999999999999999999999999876 4689999999999774 6899999999999999999
Q ss_pred Cccccc
Q 025707 214 LGRGFF 219 (249)
Q Consensus 214 l~~G~l 219 (249)
|++|.+
T Consensus 220 L~~G~~ 225 (322)
T 1mi3_A 220 FGPQSF 225 (322)
T ss_dssp TTTHHH
T ss_pred CCCCCc
Confidence 999944
|
| >3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=330.46 Aligned_cols=198 Identities=26% Similarity=0.441 Sum_probs=167.0
Q ss_pred ccccCCceecC-CCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHH----
Q 025707 5 KKLQVPRVKLG-TQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALK---- 79 (249)
Q Consensus 5 ~~~~m~~~~lg-~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~---- 79 (249)
.|.+++.+++| ++|.+||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+
T Consensus 8 ~~~~~~~~~~~~~tg~~vp~lGlGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~vG~al~~~~~ 76 (334)
T 3krb_A 8 HMGTLEAQTQGPGSMQYPPRLGFGTWQA--------PPEAVQTAVETALMTGYRHIDCAYVYQ---NEEAIGRAFGKIFK 76 (334)
T ss_dssp -------------CCSSCCSBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHH
T ss_pred cccceecCCcCCCCCCccCCeeeeCCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHhh
Confidence 45667766666 4599999999999863 678999999999999999999999999 8999999998
Q ss_pred ----cCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC--------------C---
Q 025707 80 ----ELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------S--- 138 (249)
Q Consensus 80 ----~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--------------~--- 138 (249)
..+|++++|+||++... .+++.+++++++||++||+||||+|++|+|+. .
T Consensus 77 ~~~~g~~R~~v~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~ 147 (334)
T 3krb_A 77 DASSGIKREDVWITSKLWNYN---------HRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRA 147 (334)
T ss_dssp CTTSSCCGGGCEEEEEECGGG---------CSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCB
T ss_pred hccCCCChhhEEEEeeeCCCC---------CCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccc
Confidence 45899999999998543 67899999999999999999999999999943 1
Q ss_pred ----CCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC--CceEEeeecCccccchhhhHHHHHHHhCCcEEecc
Q 025707 139 ----VPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 139 ----~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~s 212 (249)
.+.+++|++|++|+++|+||+||||||++++++++++.. +++++|++||++.+. .+++++|+++||++++|+
T Consensus 148 ~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~c~~~gI~v~ays 225 (334)
T 3krb_A 148 MLEKVPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPN--DATVKFCLDNGIGVTAYS 225 (334)
T ss_dssp CBCCCCHHHHHHHHHHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEES
T ss_pred cccCCCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCccccc--HHHHHHHHHcCCEEEEEe
Confidence 468999999999999999999999999999999998874 789999999999874 789999999999999999
Q ss_pred cCcccccCCCCC
Q 025707 213 PLGRGFFGGKAV 224 (249)
Q Consensus 213 pl~~G~l~g~~~ 224 (249)
||++|+|++++.
T Consensus 226 pL~~G~L~~~~~ 237 (334)
T 3krb_A 226 PMGGSYADPRDP 237 (334)
T ss_dssp TTCCSBC-----
T ss_pred cCCCCcccCCCC
Confidence 999999998853
|
| >3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=326.19 Aligned_cols=187 Identities=24% Similarity=0.381 Sum_probs=169.7
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CC
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LP 82 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~ 82 (249)
+++++| ++|++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+
T Consensus 2 ~~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~ 69 (316)
T 3o3r_A 2 TTFVKL-RTKAKMPLVGLGTWKS--------PPGQVKEAVKAAIDAGYRHFDCAYVYQ---NESEVGEAIQEKIKEKAVR 69 (316)
T ss_dssp CCEEEC-TTSCEEESBEEBCTTC--------CTTHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCC
T ss_pred CCeEEC-CCCCEeCCeeeECCcC--------CcHHHHHHHHHHHHcCCCEEEccCccC---CHHHHHHHHHHHHhhCCCC
Confidence 456777 8899999999999963 457899999999999999999999998 79999999985 58
Q ss_pred CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCC-------------------CCCCHHH
Q 025707 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVD-------------------TSVPIEE 143 (249)
Q Consensus 83 r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~-------------------~~~~~~~ 143 (249)
|++++|+||++... .+++.+++++++||+|||+||||+|++|||+ ...++++
T Consensus 70 R~~v~I~TK~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (316)
T 3o3r_A 70 REDLFIVSKLWSTF---------FEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLD 140 (316)
T ss_dssp GGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred hHHcEEEeeeCCCc---------CCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHH
Confidence 99999999998643 5799999999999999999999999999996 3467899
Q ss_pred HHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc
Q 025707 144 TIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (249)
Q Consensus 144 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~ 218 (249)
+|++|++|+++|+||+||||||+.++++++++.. +++++|++||++.+. .+++++|+++||+|++|+||++|.
T Consensus 141 ~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~ 217 (316)
T 3o3r_A 141 AWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQ--EKLIQYCHSKGIAVIAYSPLGSPD 217 (316)
T ss_dssp HHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHTTTCEEEEECTTCCTT
T ss_pred HHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccch--HHHHHHHHHcCCEEEEecccCCCC
Confidence 9999999999999999999999999999998763 478999999998873 789999999999999999999994
|
| >1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=325.76 Aligned_cols=188 Identities=26% Similarity=0.413 Sum_probs=171.1
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CC
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LP 82 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~ 82 (249)
+++++| ++|++||+||||||+ .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+
T Consensus 2 ~~~~~l-~tg~~v~~lglGt~~--------~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~ 69 (316)
T 1us0_A 2 ASRILL-NNGAKMPILGLGTWK--------SPPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVK 69 (316)
T ss_dssp CSEEEC-TTSCEEESBCEECTT--------CCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSC
T ss_pred CceEEC-CCCCEECCEeEECCc--------CCHHHHHHHHHHHHHcCCCEEEcccccC---CHHHHHHHHHHHHhcCCCC
Confidence 357888 899999999999986 2678999999999999999999999999 79999999986 48
Q ss_pred CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCHHH
Q 025707 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIEE 143 (249)
Q Consensus 83 r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~~ 143 (249)
|++++|+||++... .+++.+++++++||++||+||||+|++|+|+. ..++++
T Consensus 70 R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (316)
T 1us0_A 70 REELFIVSKLWCTY---------HEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILD 140 (316)
T ss_dssp GGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred hhHeEEEEeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHH
Confidence 99999999997542 67999999999999999999999999999963 236789
Q ss_pred HHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccccc
Q 025707 144 TIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219 (249)
Q Consensus 144 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l 219 (249)
+|++|++|+++|+||+||||||++++++++++.. +++++|++||++.+. .+++++|+++||+|++|+||++|.|
T Consensus 141 ~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l 218 (316)
T 1us0_A 141 TWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ--EKLIQYCQSKGIVVTAYSPLGSPDR 218 (316)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCTTC
T ss_pred HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCC--HHHHHHHHHcCCEEEEecccccCcc
Confidence 9999999999999999999999999999998863 569999999999874 6899999999999999999999986
|
| >3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=329.46 Aligned_cols=217 Identities=25% Similarity=0.356 Sum_probs=183.2
Q ss_pred ccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------
Q 025707 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (249)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------ 80 (249)
.+|++++|+ +|++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++
T Consensus 23 ~~m~~~~L~-tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~ 90 (335)
T 3h7u_A 23 NAITFFKLN-TGAKFPSVGLGTWQA--------SPGLVGDAVAAAVKIGYRHIDCAQIYG---NEKEIGAVLKKLFEDRV 90 (335)
T ss_dssp -CCCEEECT-TSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTS
T ss_pred cCCceEEcC-CCCEecceeEeCCcC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHHHHhcCC
Confidence 369999995 899999999999963 678999999999999999999999999 89999999985
Q ss_pred CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC--------------CCCHHHHHH
Q 025707 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------SVPIEETIG 146 (249)
Q Consensus 81 ~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--------------~~~~~~~~~ 146 (249)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..+.+++|+
T Consensus 91 ~~R~~v~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~ 161 (335)
T 3h7u_A 91 VKREDLFITSKLWCTD---------HDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWK 161 (335)
T ss_dssp CCGGGCEEEEEECGGG---------CSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCCHHHHHH
T ss_pred CCcceeEEEeeeCCCC---------CCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccccccccccCCHHHHHH
Confidence 3899999999997543 67899999999999999999999999999964 246899999
Q ss_pred HHHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc-cCCCC
Q 025707 147 EMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF-FGGKA 223 (249)
Q Consensus 147 ~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~-l~g~~ 223 (249)
+|++|+++|+||+||||||++++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|. ..++.
T Consensus 162 aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~sPL~~g~~~~~~~ 239 (335)
T 3h7u_A 162 AMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQ--TKLQEFCKSKGVHLSAYSPLGSPGTTWLKS 239 (335)
T ss_dssp HHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCTTCTTSCC
T ss_pred HHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCC--HHHHHHHHHCCCEEEEeccCcCCCCCCCCc
Confidence 999999999999999999999999998876 4679999999999885 689999999999999999999763 22221
Q ss_pred CC------CCCCCCcccccCCCcceeeeee
Q 025707 224 VV------ESVPLDSFLVCFSSISVSFCFI 247 (249)
Q Consensus 224 ~~------~~~~~~~~~~~~~~~~~~~~~~ 247 (249)
.. ..++ ..+..+.++++++|++.
T Consensus 240 ~~~~~~~l~~iA-~~~g~t~aqvaL~w~l~ 268 (335)
T 3h7u_A 240 DVLKNPILNMVA-EKLGKSPAQVALRWGLQ 268 (335)
T ss_dssp CGGGCHHHHHHH-HHHTCCHHHHHHHHHHH
T ss_pred cccccHHHHHHH-HHHCcCHHHHHHHHHHH
Confidence 10 0011 12344556777777653
|
| >3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-46 Score=324.68 Aligned_cols=183 Identities=27% Similarity=0.420 Sum_probs=167.5
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------C
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------L 81 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~ 81 (249)
+|++++| ++|++||+||||||+ ++.++|+.|++.|||+||||+.|| +|+.+|++|++ .
T Consensus 24 ~m~~~~L-~tg~~vs~lglGt~~------------~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~~ 87 (331)
T 3h7r_A 24 PIRFFEL-NTGAKLPCVGLGTYA------------MVATAIEQAIKIGYRHIDCASIYG---NEKEIGGVLKKLIGDGFV 87 (331)
T ss_dssp -CCEEEC-TTSCEEESBEEECTT------------CCHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTSS
T ss_pred CCcEEEC-CCCCEecCEeeccHH------------HHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHhhcCCC
Confidence 6999999 699999999999984 577999999999999999999999 89999999986 3
Q ss_pred CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC--------------CCCHHHHHHH
Q 025707 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------SVPIEETIGE 147 (249)
Q Consensus 82 ~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~--------------~~~~~~~~~~ 147 (249)
+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..+.+++|++
T Consensus 88 ~R~~v~I~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~a 158 (331)
T 3h7r_A 88 KREELFITSKLWSND---------HLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWKA 158 (331)
T ss_dssp CGGGCEEEEEECGGG---------CSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSCCGGGEECCCHHHHHHH
T ss_pred CchhEEEEEeeCCCC---------CCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccccccccccCCHHHHHHH
Confidence 899999999997543 67899999999999999999999999999964 3568999999
Q ss_pred HHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccc
Q 025707 148 MKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 148 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G 217 (249)
|++|+++|+||+||||||++++++++++. .+++++|++||++.+. .+++++|+++||++++|+||++|
T Consensus 159 L~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~g 228 (331)
T 3h7r_A 159 MEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ--QGLHELCKSKGVHLSGYSPLGSQ 228 (331)
T ss_dssp HHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCS
T ss_pred HHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCC--HHHHHHHHHCCCEEEEeCCCCCC
Confidence 99999999999999999999999998876 4689999999999875 68999999999999999999986
|
| >4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=322.79 Aligned_cols=216 Identities=29% Similarity=0.406 Sum_probs=183.9
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-------C
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-------L 81 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-------~ 81 (249)
.+++.| |||++||.||||||+ .+++++.++|+.|+++|||+||||+.|| +|+.+|++|++ .
T Consensus 2 ~~~v~L-ntG~~vp~iGlGtw~--------~~~~~a~~~i~~Al~~Gin~~DTA~~Yg---sE~~vG~al~~~~~~~~~~ 69 (324)
T 4gac_A 2 ASSVLL-HTGQKMPLIGLGTWK--------SEPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKAV 69 (324)
T ss_dssp CCEEEC-TTSCEEESBCEECTT--------CCHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHBSTTSSB
T ss_pred CCeEEC-CCCCEeccceeECCC--------CCHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhhhccccee
Confidence 456767 999999999999986 3678999999999999999999999999 89999999986 4
Q ss_pred CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCHH
Q 025707 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIE 142 (249)
Q Consensus 82 ~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~ 142 (249)
.|+++++.+|.+... .+++.+++++++||+|||+||||+|++|+|+. ..+++
T Consensus 70 ~r~~~~~~~~~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (324)
T 4gac_A 70 PREELFVTSKLWNTK---------HHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYK 140 (324)
T ss_dssp CGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHH
T ss_pred cccccccccccCCCC---------CCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHH
Confidence 688999999987543 67899999999999999999999999999863 35689
Q ss_pred HHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccC
Q 025707 143 ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220 (249)
Q Consensus 143 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~ 220 (249)
++|++|++|+++|+||+||+||+++++++++... ..+.++|+++|+.... .+++++|+++||++++|+||++|.++
T Consensus 141 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~l~~~~~~~gi~~~a~spL~~g~~~ 218 (324)
T 4gac_A 141 ETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQ--NELIAHCHARGLEVTAYSPLGSSDRA 218 (324)
T ss_dssp HHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCGGGG
T ss_pred HHHHHHHHHHHCCCeeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhhH--HHHHHHHHHhceeeeecCCcccCccc
Confidence 9999999999999999999999999999998776 4568899999987763 78999999999999999999999999
Q ss_pred CCCCCCCC-CC--------CcccccCCCcceeeeee
Q 025707 221 GKAVVESV-PL--------DSFLVCFSSISVSFCFI 247 (249)
Q Consensus 221 g~~~~~~~-~~--------~~~~~~~~~~~~~~~~~ 247 (249)
++...... .+ ..+..+.++++++|++.
T Consensus 219 ~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~ 254 (324)
T 4gac_A 219 WRHPDEPVLLEEPVVLALAEKHGRSPAQILLRWQVQ 254 (324)
T ss_dssp GGSTTSCCGGGCHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred cCCCCCcchhhHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 88543221 11 12334555677777653
|
| >2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-45 Score=320.74 Aligned_cols=213 Identities=28% Similarity=0.436 Sum_probs=177.9
Q ss_pred C-CceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHc-----C
Q 025707 9 V-PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKE-----L 81 (249)
Q Consensus 9 m-~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~-----~ 81 (249)
| ++++| ++|++||.||||||++ + +++.++|+.|++ .|||+||||+.|| +|+.+|++|+. .
T Consensus 36 m~~~~~L-~tg~~vp~lglGt~~~--------~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 102 (344)
T 2bgs_A 36 EQDHFVL-KSGHAMPAVGLGTWRA--------G-SDTAHSVRTAITEAGYRHVDTAAEYG---VEKEVGKGLKAAMEAGI 102 (344)
T ss_dssp -CCEEEC-TTSCEEESBCEECTTC--------G-GGHHHHHHHHHHTTCCCEEECCGGGT---CHHHHHHHHHHHHHTTC
T ss_pred CCceEEC-CCCCccCCeeEeCCCC--------c-HHHHHHHHHHHHhcCCCEEECCCccC---CHHHHHHHHHHhhhcCC
Confidence 6 47888 7899999999999862 4 789999999999 9999999999999 79999999986 4
Q ss_pred CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC---------------CCCHHHHHH
Q 025707 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT---------------SVPIEETIG 146 (249)
Q Consensus 82 ~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~---------------~~~~~~~~~ 146 (249)
+|++++|+||++.. ..+++.+++++++||++||+||||+|++|||+. ..+.+++|+
T Consensus 103 ~R~~v~I~TK~~~~---------~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~~~e~~~ 173 (344)
T 2bgs_A 103 DRKDLFVTSKIWCT---------NLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWK 173 (344)
T ss_dssp CGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCCHHHHHH
T ss_pred CcccEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccccccccCCCHHHHHH
Confidence 89999999999753 267999999999999999999999999999963 236889999
Q ss_pred HHHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccc--cCCC
Q 025707 147 EMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF--FGGK 222 (249)
Q Consensus 147 ~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~--l~g~ 222 (249)
+|++|+++|+||+||||||++++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|- +...
T Consensus 174 aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~--~~ll~~~~~~gI~v~a~spL~~G~~~~~~~ 251 (344)
T 2bgs_A 174 EMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN--DKIFEACKKHGIHITAYSPLGSSEKNLAHD 251 (344)
T ss_dssp HHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCTTTTCCTTC
T ss_pred HHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCc--HHHHHHHHHCCCEEEEeCcccCCCchhhcc
Confidence 999999999999999999999999999876 4579999999998874 689999999999999999999981 1000
Q ss_pred CCCCCCCCCcccccCCCcceeeee
Q 025707 223 AVVESVPLDSFLVCFSSISVSFCF 246 (249)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~ 246 (249)
.....++ ..+..+.++++++|++
T Consensus 252 ~~l~~iA-~~~g~s~aqvaL~w~l 274 (344)
T 2bgs_A 252 PVVEKVA-NKLNKTPGQVLIKWAL 274 (344)
T ss_dssp HHHHHHH-HHHTCCHHHHHHHHHH
T ss_pred HHHHHHH-HHhCCCHHHHHHHHHH
Confidence 0000111 1233455677777765
|
| >3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri} | Back alignment and structure |
|---|
Probab=97.83 E-value=6.2e-06 Score=79.18 Aligned_cols=99 Identities=12% Similarity=0.042 Sum_probs=75.8
Q ss_pred HHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE--EcCCCCH---H----------------HHHHH
Q 025707 115 CEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI--GLSEASP---D----------------TIRRA 173 (249)
Q Consensus 115 ~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i--Gvs~~~~---~----------------~l~~~ 173 (249)
++.+|.+|++|++|++ +|..+... .++++++++++..+|+|+.+ |+|++.. + ...++
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~~~-~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~~ 308 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNVAG-VTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELKV 308 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCCHH-HHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHHH
T ss_pred eeccccccCCCCceEE-EECCcCcc-HHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHHH
Confidence 5567888999999994 76554432 46889999999999999999 4444433 1 23444
Q ss_pred hhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcc-ccc
Q 025707 174 HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGR-GFF 219 (249)
Q Consensus 174 ~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~-G~l 219 (249)
+....+++++++||-..+ .+++.|.+.|++|++.+|.++ |.+
T Consensus 309 i~tGa~dv~vV~~n~i~~----~ll~~a~~~Gm~Vit~sp~~~~Grp 351 (807)
T 3cf4_A 309 IRSGMPDVIVVDEQCVRG----DIVPEAQKLKIPVIASNPKIMYGLP 351 (807)
T ss_dssp HHHTCCSEEEECSSSCCT----THHHHHHHTTCCEEECSTTCCTTCC
T ss_pred hhcCCCeEEEEEecCCCh----HHHHHHHHCCCEEEEechhhhcCCC
Confidence 556789999999987653 588999999999999999986 554
|
| >1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A | Back alignment and structure |
|---|
Probab=94.28 E-value=1.7 Score=37.24 Aligned_cols=154 Identities=8% Similarity=0.040 Sum_probs=96.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+....+.+.|++.|..--.-++-+....+-+++++.-.+++-|.-+... .++++...+-++. |
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-l 212 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQ----------SLDVPAAIKRSQA-L 212 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHHHHHH-H
Confidence 4566777888888999999986321111011222223444312234445444321 2456655554444 7
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.++++++. .|-.. +-++.+.++++.-.|--++- +.++++.++++++....+++|+..+-.-. ....++
T Consensus 213 ~~~~i~~iE-----~P~~~----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i 283 (359)
T 1mdl_A 213 QQEGVTWIE-----EPTLQ----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRA 283 (359)
T ss_dssp HHHTCSCEE-----CCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHH
T ss_pred HHhCCCeEE-----CCCCh----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHH
Confidence 888887653 34222 34777788887766655544 44678899999988889999998766532 122789
Q ss_pred HHHHHHhCCcEEeccc
Q 025707 198 VPLCRELGIGIVPYCP 213 (249)
Q Consensus 198 ~~~~~~~gi~v~a~sp 213 (249)
.+.|+++|+.++..+.
T Consensus 284 ~~~A~~~g~~~~~~~~ 299 (359)
T 1mdl_A 284 SALAQQFGIPMSSHLF 299 (359)
T ss_dssp HHHHHHTTCCBCCBSC
T ss_pred HHHHHHcCCeEeeccH
Confidence 9999999999887753
|
| >1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=93.82 E-value=2.3 Score=36.63 Aligned_cols=158 Identities=11% Similarity=0.070 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+..+.+.+ .|++.|..--.-++-......-+++++.-.+++-|.-.... .++.+...+-++ .
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~-~ 210 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAVGDRASVRVDVNQ----------GWDEQTASIWIP-R 210 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHHGGGCEEEEECTT----------CCCHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhcCCCCEEEEECCC----------CCCHHHHHHHHH-H
Confidence 46777788888898 99999985322111011222333444311223444444321 245665554443 6
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.++++++ ..|-.. +.++.+.+++++-.|.-+ |=+.++.+.++++++....+++|+..+-.-. ....+
T Consensus 211 l~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 281 (370)
T 1nu5_A 211 LEEAGVELV-----EQPVPR----ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLK 281 (370)
T ss_dssp HHHHTCCEE-----ECCSCT----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCcceE-----eCCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHH
Confidence 788887653 444322 236677777776555433 3355788999999998889999997655422 11277
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 282 i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 282 VAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCcEEecCCcchH
Confidence 999999999999988765443
|
| >2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A | Back alignment and structure |
|---|
Probab=93.64 E-value=2.4 Score=36.89 Aligned_cols=156 Identities=17% Similarity=0.128 Sum_probs=97.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--.-.+-+. ..+-+++++.-.+++-|.-+... .++.+...+-++ .|
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~g~d~~l~vDan~----------~~~~~~a~~~~~-~l 231 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQVLGPQAKIAADMHW----------NQTPERALELIA-EM 231 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHHCTTSEEEEECCS----------CSCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHHHHH-HH
Confidence 5677888888899999999985311101112 23333444412234444444321 245666555554 37
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.++++++. .|-.. +.++.+.++++.-.|--++- +-++++.++++++....+++|+..+- -.- ...++
T Consensus 232 ~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i 301 (388)
T 2nql_A 232 QPFDPWFAE-----APVWT----EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGITNFIRI 301 (388)
T ss_dssp GGGCCSCEE-----CCSCT----TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHH
T ss_pred hhcCCCEEE-----CCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHH
Confidence 888887653 34222 34777888887755555544 44688899999988889999997665 221 12678
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+..+
T Consensus 302 ~~~A~~~g~~~~~h~~~es~ 321 (388)
T 2nql_A 302 GALAAEHGIDVIPHATVGAG 321 (388)
T ss_dssp HHHHHHHTCEECCCCCSSCS
T ss_pred HHHHHHcCCeEEeecCCCcH
Confidence 99999999999987554433
|
| >2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=93.61 E-value=1.8 Score=37.94 Aligned_cols=155 Identities=9% Similarity=-0.030 Sum_probs=96.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC----cCC--------C------chHHHHHHHHHcCCCCCeEEEecccccccCCcc
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK----YGP--------Y------TNEILLGKALKELPRENIQVATKFGFVELGFTS 101 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~----Yg~--------g------~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~ 101 (249)
+.++..+....+.+.|++.|..-.. +|. . +....+-+++++.-.+++-|.-....
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~------- 224 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHA------- 224 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT-------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCC-------
Confidence 6778888888899999999985421 221 0 01112222333311234555544321
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCce
Q 025707 102 VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPIT 180 (249)
Q Consensus 102 ~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~ 180 (249)
.++++...+-++. |+.++++++. .|-.. +.++.+.++++.-.|.-++- +-++++.++++++....+
T Consensus 225 ---~~~~~~a~~~~~~-l~~~~i~~iE-----~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d 291 (407)
T 2o56_A 225 ---FTDTTSAIQFGRM-IEELGIFYYE-----EPVMP----LNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLS 291 (407)
T ss_dssp ---CSCHHHHHHHHHH-HGGGCCSCEE-----CSSCS----SSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCS
T ss_pred ---CCCHHHHHHHHHH-HHhcCCCEEe-----CCCCh----hhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCC
Confidence 2456666555554 7888876543 44322 23667777777655554443 445778899999888899
Q ss_pred EEeeecCccccc-hhhhHHHHHHHhCCcEEecccC
Q 025707 181 AVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 181 ~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~spl 214 (249)
++|+..+-+-.- ...++.+.|+++|+.++..+..
T Consensus 292 ~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 292 VIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp EECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred EEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 999987664321 1278999999999999987763
|
| >2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A | Back alignment and structure |
|---|
Probab=93.54 E-value=2.4 Score=36.58 Aligned_cols=154 Identities=11% Similarity=0.030 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC-CchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~-g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+..+.+.+.|++.|..--.-++ ....+.+ +++++.-.+++-|.-+... .++++...+-++ .
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~G~d~~l~vDan~----------~~~~~~a~~~~~-~ 213 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRV-SALREHLGDSFPLMVDANM----------KWTVDGAIRAAR-A 213 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CSCHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHH-H
Confidence 5677888888899999999985422111 0122233 4444411123333333321 245665555444 4
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE-cCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.++++++ ..|-... -++.+.++++.-.|.-++ =+.++.+.++++++....+++|+..+-+-. ....+
T Consensus 214 l~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 284 (371)
T 2ovl_A 214 LAPFDLHWI-----EEPTIPD----DLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRK 284 (371)
T ss_dssp HGGGCCSEE-----ECCSCTT----CHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHH
T ss_pred HHhcCCCEE-----ECCCCcc----cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHH
Confidence 777777654 4443322 366667776654454443 345688999999988889999998766432 12278
Q ss_pred HHHHHHHhCCcEEecccC
Q 025707 197 IVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl 214 (249)
+.+.|+++|+.++..+.+
T Consensus 285 i~~~A~~~gi~~~~h~~~ 302 (371)
T 2ovl_A 285 VAALAEANNMLLTSHGVH 302 (371)
T ss_dssp HHHHHHHTTCCEEECSCH
T ss_pred HHHHHHHcCCeEccccHH
Confidence 999999999999987653
|
| >2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A | Back alignment and structure |
|---|
Probab=93.48 E-value=1.7 Score=37.03 Aligned_cols=157 Identities=10% Similarity=0.040 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--.-......+.+ +++++. .+++-|.-.. +. .++++...+-+ +.|
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v-~avr~~-g~~~~l~vDa--n~--------~~~~~~a~~~~-~~l 205 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAV-EEIAKV-TRGAKYIVDA--NM--------GYTQKEAVEFA-RAV 205 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHH-STTCEEEEEC--TT--------CSCHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHH-HHHHhh-CCCCeEEEEC--CC--------CCCHHHHHHHH-HHH
Confidence 46777788888899999998753211100122333 555544 3455443222 11 24566655544 447
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE-cCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.++++ ..++..|-.. +-++.+.+++++-.|.-.+ =+-++.+.++++++....+++|+..+- -.- ....+
T Consensus 206 ~~~~i~---~~~iE~P~~~----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i 277 (345)
T 2zad_A 206 YQKGID---IAVYEQPVRR----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAI 277 (345)
T ss_dssp HHTTCC---CSEEECCSCT----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHH
T ss_pred HhcCCC---eeeeeCCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHH
Confidence 788776 1134455332 2366677777765554443 355788999999988888999996554 221 12679
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+..+
T Consensus 278 ~~~A~~~g~~~~~~~~~es~ 297 (345)
T 2zad_A 278 VEIAESSGLKLMIGCMGESS 297 (345)
T ss_dssp HHHHHTTTCEEEECCSSCCH
T ss_pred HHHHHHcCCeEEEecCcccH
Confidence 99999999999998776443
|
| >3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779} | Back alignment and structure |
|---|
Probab=93.44 E-value=2.2 Score=36.87 Aligned_cols=157 Identities=11% Similarity=0.059 Sum_probs=97.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+++.|++.|-.--.-.+-..+...-+++++ .+.-++.|=... .++++... +.
T Consensus 143 ~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~~~~~l~vDaN~------------~~~~~~A~----~~ 206 (365)
T 3ik4_A 143 DEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAAPTAPLIVDGNC------------GYDVERAL----AF 206 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHSSSCCEEEECTT------------CCCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhCCCCeEEEECCC------------CCCHHHHH----HH
Confidence 57888888889999999998654322111123333345554 433233322111 24454433 23
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~ 196 (249)
+++|..+..++.++..|-...+ ++.+.+++++-.| -..|=+.++...+.+++....++++|+..+. -.- ...+
T Consensus 207 ~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~ 281 (365)
T 3ik4_A 207 CAACKAESIPMVLFEQPLPRED----WAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVINIKLMK-AGVAEGLK 281 (365)
T ss_dssp HHHHHHTTCCEEEEECCSCTTC----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHH
T ss_pred HHHHhhCCCCceEEECCCCccc----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHH
Confidence 3344112347888888755443 5666677665444 3556677899999999888889999997665 321 1277
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 282 i~~~A~~~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 282 MIAIAQAAGLGLMIGGMVESI 302 (365)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCeEEecCCcccH
Confidence 899999999999988776543
|
| >3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=93.43 E-value=3.6 Score=35.73 Aligned_cols=157 Identities=9% Similarity=0.062 Sum_probs=97.4
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+..+.+++. |++.|..--.-.+-..+...-+++++.-.+++-|.-.... .++++...+ +-+.
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~A~~-~~~~ 216 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINA----------RWDRRTALH-YLPI 216 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCC----------CCCHHHHHH-HHHH
Confidence 567777777888887 9999976432211123333445666533445555555421 244544432 3456
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+++++|+ .|-... -++.+.+++++-.| -..|=+-++.+.++++++...++++|+..+-.-. ....+
T Consensus 217 l~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 287 (383)
T 3i4k_A 217 LAEAGVELFE-----QPTPAD----DLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKK 287 (383)
T ss_dssp HHHTTCCEEE-----SCSCTT----CHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHH
T ss_pred HHhcCCCEEE-----CCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHH
Confidence 7778776554 443322 25556666665333 3345566889999999988889999998766532 12277
Q ss_pred HHHHHHHhCCcEEecccCcc
Q 025707 197 IVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~ 216 (249)
+.+.|+++|+.++..+.+..
T Consensus 288 ia~~A~~~gi~~~~~~~~es 307 (383)
T 3i4k_A 288 IAAIAEAGGLACHGATSLEG 307 (383)
T ss_dssp HHHHHHHTTCEEEECCSCCC
T ss_pred HHHHHHHcCCeEEeCCCCcc
Confidence 99999999999987665543
|
| >3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A* | Back alignment and structure |
|---|
Probab=93.31 E-value=1.3 Score=38.77 Aligned_cols=158 Identities=8% Similarity=0.006 Sum_probs=98.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEE-ecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVA-TKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~-tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+..+.+++.|++.|..--... ...+...-+++++.-.+++-|. -... . .++++...+ +-+.
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~-~~~d~~~v~avR~a~g~~~~l~~vDan--~--------~~~~~~A~~-~~~~ 209 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKN-LDADEEFLSRVKEEFGSRVRIKSYDFS--H--------LLNWKDAHR-AIKR 209 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSC-HHHHHHHHHHHHHHHGGGCEEEEEECT--T--------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCC-HHHHHHHHHHHHHHcCCCCcEEEecCC--C--------CcCHHHHHH-HHHH
Confidence 567788888899999999997643221 1122233345544212344443 3321 1 244544332 2334
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
|+.+++ ++.++..|-... .++.+.++++.-.|.- |=+.++.+.++++++...++++|+..+-.-. ....++
T Consensus 210 l~~~~i---~~~~iEqP~~~~----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 210 LTKYDL---GLEMIESPAPRN----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp HTTCCS---SCCEEECCSCTT----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHhcCC---CcceecCCCChh----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 555554 225555654332 3667778887766665 8899999999999988889999997655432 112789
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+..+
T Consensus 282 a~~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 282 AYAAEVASKDVVLGTTQELS 301 (391)
T ss_dssp HHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHcCCEEEecCCCccH
Confidence 99999999999987655443
|
| >2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens} | Back alignment and structure |
|---|
Probab=93.31 E-value=1.5 Score=38.02 Aligned_cols=152 Identities=11% Similarity=-0.020 Sum_probs=93.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--.-. -+....+-+++++.-.+++-|.-+... .++++...+-+ +.|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~~-~~~~~e~v~avr~a~g~d~~l~vDan~----------~~~~~~a~~~~-~~l 212 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGAD-WQSDIDRIRACLPLLEPGEKAMADANQ----------GWRVDNAIRLA-RAT 212 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHGGGSCTTCEEEEECTT----------CSCHHHHHHHH-HHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCC-HHHHHHHHHHHHHhcCCCCEEEEECCC----------CCCHHHHHHHH-HHH
Confidence 456677788888999999998532110 012222334444422345555554321 24555443333 224
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++ ++..|-. .++.+.++++.-.|--++- +-++++.++++++....+++|+..+-.-. ....++
T Consensus 213 ~~~~i------~iE~P~~------~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 280 (379)
T 2rdx_A 213 RDLDY------ILEQPCR------SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRT 280 (379)
T ss_dssp TTSCC------EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHH
T ss_pred HhCCe------EEeCCcC------CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 44443 4444422 5778888887755554443 44688899999988889999998776532 222789
Q ss_pred HHHHHHhCCcEEecccCc
Q 025707 198 VPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (249)
.+.|+++|+.++..+.+.
T Consensus 281 ~~~A~~~g~~~~~~~~~e 298 (379)
T 2rdx_A 281 RDFLIDNRMPVVAEDSWG 298 (379)
T ss_dssp HHHHHHTTCCEEEECSBC
T ss_pred HHHHHHcCCeEEEeeccC
Confidence 999999999999886443
|
| >2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=93.17 E-value=3.9 Score=35.41 Aligned_cols=156 Identities=11% Similarity=0.068 Sum_probs=97.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+....+.+.|++.|..--.- +-+....+-+++++.-. ++-|.-+.. ..++.+...+-+ +.|
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~g-d~~l~vD~n----------~~~~~~~a~~~~-~~l 213 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLKVGR-GEKLDLEITAAVRGEIG-DARLRLDAN----------EGWSVHDAINMC-RKL 213 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHTTST-TCEEEEECT----------TCCCHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCC-CHHHHHHHHHHHHHHcC-CcEEEEecC----------CCCCHHHHHHHH-HHH
Confidence 56777888888999999999863211 10112223345554222 555544432 124566554433 467
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+|++++. .|-.. +.++.+.++++.-.|--++- +-++++.++++++....+++|+..+-+-. ....++
T Consensus 214 ~~~~i~~iE-----qP~~~----~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 284 (384)
T 2pgw_A 214 EKYDIEFIE-----QPTVS----WSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKA 284 (384)
T ss_dssp GGGCCSEEE-----CCSCT----TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhcCCCEEe-----CCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHH
Confidence 788877654 44322 24677777777655655544 34678999999988889999997655422 222779
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+..+
T Consensus 285 ~~~A~~~g~~~~~~~~~es~ 304 (384)
T 2pgw_A 285 AAVAEAAGLKICIHSSFTTG 304 (384)
T ss_dssp HHHHHHTTCCEEECCCSCCH
T ss_pred HHHHHHCCCeEeeccCcCCH
Confidence 99999999999988754443
|
| >3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A | Back alignment and structure |
|---|
Probab=92.93 E-value=2.9 Score=36.30 Aligned_cols=156 Identities=8% Similarity=0.056 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|-.--...+-..+...-+++++.- +++-|.-.... .++++...+ +-+.|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~-~~~~l~vDan~----------~~~~~~A~~-~~~~L 215 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDF-PEFRVRVDYNQ----------GLEIDEAVP-RVLDV 215 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHC-TTSEEEEECTT----------CCCGGGHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhC-CCCeEEEECCC----------CCCHHHHHH-HHHHH
Confidence 4566667778888899999975432211112333344555533 55555554322 234443332 33456
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++++|+ .|-... -++.+.+++++-.|. ..|=+.++...+.++++...++++|+..+-.-. ....++
T Consensus 216 ~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 286 (385)
T 3i6e_A 216 AQFQPDFIE-----QPVRAH----HFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTV 286 (385)
T ss_dssp HTTCCSCEE-----CCSCTT----CHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhcCCCEEE-----CCCCcc----cHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 677766554 443322 366777887764443 445577889999999988888999997655322 112779
Q ss_pred HHHHHHhCCcEEecccCcc
Q 025707 198 VPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~ 216 (249)
.+.|+++|+.++..+.+..
T Consensus 287 ~~~A~~~gi~~~~~~~~es 305 (385)
T 3i6e_A 287 ARIAAAHGLMAYGGDMFEA 305 (385)
T ss_dssp HHHHHHTTCEEEECCCSCC
T ss_pred HHHHHHcCCEEEeCCCCcc
Confidence 9999999999987665443
|
| >2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A* | Back alignment and structure |
|---|
Probab=92.67 E-value=2.8 Score=36.51 Aligned_cols=153 Identities=7% Similarity=-0.020 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCc-hHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT-NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~-se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+....+.+.|++.|..--.-++-+ ..+.+ +++++.-.+++-|.-... ..++++...+-++.
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v-~avR~avg~d~~l~vDan----------~~~~~~~a~~~~~~- 229 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARV-TAVRKHLGDAVPLMVDAN----------QQWDRPTAQRMCRI- 229 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHH-HHHHHHHCTTSCEEEECT----------TCCCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHH-HHHHHHcCCCCEEEEECC----------CCCCHHHHHHHHHH-
Confidence 577788888889999999987632111101 22333 455541122333333321 12466666555544
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.++++++. .|-.. +.++.+.++++.-.|--++- +.++++.++++++....+++|+..+-.-. ....+
T Consensus 230 l~~~~i~~iE-----~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 300 (393)
T 2og9_A 230 FEPFNLVWIE-----EPLDA----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLK 300 (393)
T ss_dssp HGGGCCSCEE-----CCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHH
T ss_pred HHhhCCCEEE-----CCCCc----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHH
Confidence 7888887654 34222 23667777777655544433 45688999999988889999997655322 11278
Q ss_pred HHHHHHHhCCcEEeccc
Q 025707 197 IVPLCRELGIGIVPYCP 213 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~sp 213 (249)
+.+.|+++|+.++..+.
T Consensus 301 i~~~A~~~gi~~~~h~~ 317 (393)
T 2og9_A 301 IASLAEHAGLMLAPHFA 317 (393)
T ss_dssp HHHHHHHTTCEECCCSC
T ss_pred HHHHHHHcCCEEeccCc
Confidence 99999999999986654
|
| >3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum} | Back alignment and structure |
|---|
Probab=92.51 E-value=2.9 Score=36.48 Aligned_cols=157 Identities=13% Similarity=0.021 Sum_probs=97.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+++.|++.|=.--.-.+-..+...-+++++ .+. +-|.--. +. .++++...+ .
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v~avR~~~~~--~~L~vDa--N~--------~w~~~~A~~----~ 207 (389)
T 3s5s_A 144 SPERAEEAARRAAAMGFRALKVKVGGRLAASDPARIEAIHAAAPG--ASLILDG--NG--------GLTAGEALA----L 207 (389)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHHHHHHHHCTT--CEEEEEC--TT--------CSCHHHHHH----H
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHHHHHHHhCCC--CeEEEEC--CC--------CCCHHHHHH----H
Confidence 45677788888899999998653222111123333345554 432 2222221 11 244444333 3
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~ 196 (249)
+++|..+.+++.++..|-...+ ++.+.++.+.-.| -..|=|.++...+.+++....++++|+..+. -.- ...+
T Consensus 208 ~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~~ 282 (389)
T 3s5s_A 208 VAHARRLGADVALLEQPVPRDD----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK-GGIAEALD 282 (389)
T ss_dssp HHHHHHTTCEEEEEECCSCTTC----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHHH
T ss_pred HHHHhhCCCCeEEEECCCCccc----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHH
Confidence 3444213458899988865444 4556666655333 4567788999999999988889999997665 221 1267
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 283 i~~~A~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 283 IAAVARAAGLGLMIGGMVESV 303 (389)
T ss_dssp HHHHHHHTTCEEEECCSSCCH
T ss_pred HHHHHHHcCCeEEecCCcccH
Confidence 899999999999988776443
|
| >1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A | Back alignment and structure |
|---|
Probab=92.31 E-value=4.8 Score=34.53 Aligned_cols=156 Identities=8% Similarity=0.057 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+....+.+.|++.|..--.-++-......-+++++.-.+++-|.-.... .++.+...+-++. |
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-l 208 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDANQ----------GWRPKEAVTAIRK-M 208 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 4666777888888999999986321111011122223444311234445444321 2455555444443 6
Q ss_pred HH--cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhh
Q 025707 120 RR--LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (249)
Q Consensus 120 ~~--Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~ 195 (249)
+. ++ +.++..|-... .++.+.+++++-.|.-. |=+.++.+.+.++++....+++|+..+-.-. ....
T Consensus 209 ~~~~~~-----i~~iEqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~ 279 (366)
T 1tkk_A 209 EDAGLG-----IELVEQPVHKD----DLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAE 279 (366)
T ss_dssp HHTTCC-----EEEEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHH
T ss_pred hhcCCC-----ceEEECCCCcc----cHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHH
Confidence 66 44 45566664322 36667777766444433 4456788999999988889999997655422 1127
Q ss_pred hHHHHHHHhCCcEEecccCc
Q 025707 196 EIVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl~ 215 (249)
++.+.|+++|+.++..+.+.
T Consensus 280 ~i~~~A~~~g~~~~~~~~~e 299 (366)
T 1tkk_A 280 KINAMAEACGVECMVGSMIE 299 (366)
T ss_dssp HHHHHHHHHTCCEEECCSSC
T ss_pred HHHHHHHHcCCcEEecCccc
Confidence 79999999999999877653
|
| >2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP} | Back alignment and structure |
|---|
Probab=92.30 E-value=5.3 Score=34.75 Aligned_cols=156 Identities=8% Similarity=0.045 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--........+.+ +++++.-.+++-|.-... ..++++...+-++ .|
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v-~avR~a~g~d~~l~vDan----------~~~~~~~a~~~~~-~l 212 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMV-AEVRRAVGDDVDLFIDIN----------GAWTYDQALTTIR-AL 212 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHH-HHHHHHHCTTSCEEEECT----------TCCCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHH-HHHHHhhCCCCEEEEECC----------CCCCHHHHHHHHH-HH
Confidence 56777788888889999998753211100122333 444441122333333321 1245665544443 67
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE-cCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.++++++ ..|-.. +.++.+.+++++-.|--.+ =+.++.+.++++++....+++|+..+-.-.- ...++
T Consensus 213 ~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 283 (397)
T 2qde_A 213 EKYNLSKI-----EQPLPA----WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRW 283 (397)
T ss_dssp GGGCCSCE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhCCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 77887754 344322 2467777887765554443 3456888999999888899999976654221 12779
Q ss_pred HHHHHHhCCcEEecccCcc
Q 025707 198 VPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~ 216 (249)
.+.|+++|+.++..+.+.+
T Consensus 284 ~~~A~~~g~~~~~~~~~es 302 (397)
T 2qde_A 284 LTLARLANLPVICGCMVGS 302 (397)
T ss_dssp HHHHHHHTCCEEECCCSCC
T ss_pred HHHHHHcCCeEEEecCccc
Confidence 9999999999998865443
|
| >3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A* | Back alignment and structure |
|---|
Probab=92.29 E-value=3.3 Score=35.67 Aligned_cols=156 Identities=13% Similarity=0.111 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+++. |++.|-.--.......+...-+++++.-.+++-|.-.... .++.+...+ +-+.
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~~-~~~~ 207 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNR----------GWSAAESLR-AMRE 207 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHH-HHHH
Confidence 577788888888998 9999876433221113333344555421233333333211 244443322 2344
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeE-EEcCCCCHHHHHHHhhcCCceEEeeecCccccch-hhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~ 196 (249)
|+.+++++ +..|-... .++.+.++++.-.|.- .|=+-++.+.++++++...++++|+..+-. .-. ..+
T Consensus 208 l~~~~i~~-----iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~ 277 (367)
T 3dg3_A 208 MADLDLLF-----AEELCPAD----DVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIKTART-GFTGSTR 277 (367)
T ss_dssp TTTSCCSC-----EESCSCTT----SHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH-TTHHHHH
T ss_pred HHHhCCCE-----EECCCCcc----cHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh-hHHHHHH
Confidence 55555544 44553332 3566777777655543 455668889999998888899999977655 321 277
Q ss_pred HHHHHHHhCCcEEecccCcc
Q 025707 197 IVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~ 216 (249)
+.+.|+++|+.++..+.+.+
T Consensus 278 ia~~A~~~gi~~~~~~~~es 297 (367)
T 3dg3_A 278 VHHLAEGLGLDMVMGNQIDG 297 (367)
T ss_dssp HHHHHHHHTCEEEECCSSCC
T ss_pred HHHHHHHcCCeEEECCcCCc
Confidence 99999999999997665443
|
| >2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample} | Back alignment and structure |
|---|
Probab=92.23 E-value=5.3 Score=34.66 Aligned_cols=154 Identities=12% Similarity=0.092 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..-.....-+....+-+++++.-.+++-|.-+... .++++...+-++. |
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~-l 217 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDLAV----------PEDLDQTKSFLKE-V 217 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEECCC----------CSCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEcCC----------CCCHHHHHHHHHH-H
Confidence 5777888888899999999985422110011122223444311223434434321 2456655554444 7
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.++++++ ..|-.. +.++.+.++++.-.|--++- +-++++.++++++....+++|+..+-.-.- ...++
T Consensus 218 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 288 (391)
T 2qgy_A 218 SSFNPYWI-----EEPVDG----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEI 288 (391)
T ss_dssp GGGCCSEE-----ECSSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHH
T ss_pred HhcCCCeE-----eCCCCh----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHH
Confidence 77887654 344322 34677777877655554433 456789999999888899999977664321 12789
Q ss_pred HHHHHHhCCcEEeccc
Q 025707 198 VPLCRELGIGIVPYCP 213 (249)
Q Consensus 198 ~~~~~~~gi~v~a~sp 213 (249)
.+.|+++|+.++..+.
T Consensus 289 ~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 289 SNEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHHHTTCEECCBCC
T ss_pred HHHHHHCCCEEeccCC
Confidence 9999999999998875
|
| >3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A | Back alignment and structure |
|---|
Probab=92.20 E-value=3 Score=35.95 Aligned_cols=157 Identities=10% Similarity=0.006 Sum_probs=98.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|-.--... ...+...-+++++.-.+++-|.-.... .++.+...+ +-+.|
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~-~~~d~~~v~avR~~~g~~~~l~vDaN~----------~~~~~~A~~-~~~~l 207 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGS-KELDVERIRMIREAAGDSITLRIDANQ----------GWSVETAIE-TLTLL 207 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCSSSEEEEECTT----------CBCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCC-HHHHHHHHHHHHHHhCCCCeEEEECCC----------CCChHHHHH-HHHHH
Confidence 567788888888999999987643221 123333344555422234434433211 244544433 34466
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++++|+ .|-.. +-++.+.+++++-.|. ..|=+-++...+.++++...++++|+..+-.-. ....++
T Consensus 208 ~~~~i~~iE-----qP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 278 (368)
T 3q45_A 208 EPYNIQHCE-----EPVSR----NLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNI 278 (368)
T ss_dssp GGGCCSCEE-----CCBCG----GGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred hhcCCCEEE-----CCCCh----hHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHH
Confidence 777776664 33221 2356677777764443 334467889999999988889999998766532 122789
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+.++
T Consensus 279 ~~~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 279 IRLAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp HHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHcCCcEEecCccccH
Confidence 99999999999987766443
|
| >2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A* | Back alignment and structure |
|---|
Probab=91.93 E-value=3.9 Score=35.67 Aligned_cols=151 Identities=11% Similarity=0.002 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCc---hHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT---NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~---se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (249)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++-|.-... ..++++...+-++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~--g~~~~~~d~e~v-~avR~avG~d~~l~vDan----------~~~~~~~ai~~~~ 241 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKV--GQPNCAEDIRRL-TAVREALGDEFPLMVDAN----------QQWDRETAIRMGR 241 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--CCSCHHHHHHHH-HHHHHHHCSSSCEEEECT----------TCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEec--CCCCHHHHHHHH-HHHHHHcCCCCeEEEECC----------CCCCHHHHHHHHH
Confidence 577788888889999999987632 2111 22333 445441122333333321 1245666555555
Q ss_pred HHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE-cCCCCHHHHHHHhhcCCceEEeeecCcccc-chh
Q 025707 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (249)
Q Consensus 117 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~ 194 (249)
. |+.++++++ ..|-.. +.++.+.+++++-.|--++ =+.++.+.++++++....+++|+..+-.-. ...
T Consensus 242 ~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~ 311 (398)
T 2pp0_A 242 K-MEQFNLIWI-----EEPLDA----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPF 311 (398)
T ss_dssp H-HGGGTCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHH
T ss_pred H-HHHcCCcee-----eCCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 4 788887654 344322 2366777777765554443 345688999999988888999997654322 112
Q ss_pred hhHHHHHHHhCCcEEeccc
Q 025707 195 NEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~sp 213 (249)
.++.+.|+++|+.++..+.
T Consensus 312 ~~i~~~A~~~gi~~~~h~~ 330 (398)
T 2pp0_A 312 LKIMDLAAKHGRKLAPHFA 330 (398)
T ss_dssp HHHHHHHHHTTCEECCCSC
T ss_pred HHHHHHHHHcCCeEeecCc
Confidence 7899999999999986654
|
| >3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A* | Back alignment and structure |
|---|
Probab=91.80 E-value=5.6 Score=34.02 Aligned_cols=154 Identities=11% Similarity=0.050 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|..--.-.. ..+...-+++++.-.+++-|.-.... .++++... +.+
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~~-~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~----~~~ 203 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTGI-EADIARVKAIREAVGFDIKLRLDANQ----------AWTPKDAV----KAI 203 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCTTSEEEEECTT----------CSCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHH----HHH
Confidence 5677888888889999999986532211 12333344555422234444444321 23444332 233
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
++|. ..++.++..|-...+ ++.+.+++++-.|. ..|=+-++.+.++++++....+++|+..+-.-. ....++
T Consensus 204 ~~L~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i 277 (354)
T 3jva_A 204 QALA--DYQIELVEQPVKRRD----LEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKI 277 (354)
T ss_dssp HHTT--TSCEEEEECCSCTTC----HHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHH--hcCCCEEECCCChhh----HHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 4442 345667776654333 56677777664443 334567888999999988889999997655422 112789
Q ss_pred HHHHHHhCCcEEecccC
Q 025707 198 VPLCRELGIGIVPYCPL 214 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (249)
.+.|+++|+.++..+.+
T Consensus 278 ~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 278 NQICETAGIECMIGCMA 294 (354)
T ss_dssp HHHHHHTTCEEEECCCT
T ss_pred HHHHHHcCCeEEecCCC
Confidence 99999999999988877
|
| >2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis} | Back alignment and structure |
|---|
Probab=91.75 E-value=5.5 Score=34.64 Aligned_cols=156 Identities=8% Similarity=0.006 Sum_probs=94.6
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCC----cCC--------Cc---h---HHHHHHHHHcCCCCCeEEEecccccccCCc
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADK----YGP--------YT---N---EILLGKALKELPRENIQVATKFGFVELGFT 100 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~----Yg~--------g~---s---e~~lg~~l~~~~r~~~~I~tK~~~~~~~~~ 100 (249)
.+.++..+....+.+.|++.|..-.. +|. .. . ....-+++++.-.+++-|.-....
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~------ 218 (403)
T 2ox4_A 145 GRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHG------ 218 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCC------
Confidence 46788888888899999999985421 221 00 0 112222333311234555544321
Q ss_pred ccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCc
Q 025707 101 SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPI 179 (249)
Q Consensus 101 ~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~ 179 (249)
.++++...+-++. |+.+++ .++..|-.. +.++.+.+++++-.|.-++- +-++.+.++++++....
T Consensus 219 ----~~~~~~ai~~~~~-l~~~~i-----~~iE~P~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 284 (403)
T 2ox4_A 219 ----HTDLVSAIQFAKA-IEEFNI-----FFYEEINTP----LNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSI 284 (403)
T ss_dssp ----CSCHHHHHHHHHH-HGGGCE-----EEEECCSCT----TSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCC
T ss_pred ----CCCHHHHHHHHHH-HHhhCC-----CEEeCCCCh----hhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCC
Confidence 2455555444443 565544 455555332 23677778887755655544 34567889999888888
Q ss_pred eEEeeecCcccc-chhhhHHHHHHHhCCcEEecccC
Q 025707 180 TAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 180 ~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~spl 214 (249)
+++|+..+-.-. ....++.+.|+++|+.++..+..
T Consensus 285 d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 285 DVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp SEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred CEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 999997665422 11278999999999999987763
|
| >3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia} | Back alignment and structure |
|---|
Probab=91.67 E-value=3.4 Score=36.16 Aligned_cols=150 Identities=9% Similarity=-0.058 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-C-CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-L-PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~-~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
.++..+.++.+++.|++.|..-- +.....+.+ +++++ . +.-.+.+ .... .++.+. . .+-+.
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv--~~~~d~~~v-~avR~a~G~~~~L~v--DaN~----------~w~~~~-~-~~~~~ 226 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKI--KPGWDVEPL-QETRRAVGDHFPLWT--DANS----------SFELDQ-W-ETFKA 226 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEC--BTTBSHHHH-HHHHHHHCTTSCEEE--ECTT----------CCCGGG-H-HHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe--CcchHHHHH-HHHHHhcCCCCEEEE--eCCC----------CCCHHH-H-HHHHH
Confidence 78888888999999999987543 222233333 44554 2 3334444 3211 234554 3 33456
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+++++|. .|-... .++.+.++++.-.|. ..|=+.++...+.++++...++++|+..+-.-. ....+
T Consensus 227 l~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 297 (400)
T 3mwc_A 227 MDAAKCLFHE-----QPLHYE----ALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIK 297 (400)
T ss_dssp HGGGCCSCEE-----SCSCTT----CHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCCCEEe-----CCCChh----hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHH
Confidence 7777776654 443322 356677777764443 445577889999999988889999997655422 11278
Q ss_pred HHHHHHHhCCcEEecccCcc
Q 025707 197 IVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~ 216 (249)
+.+.|+++|+.++..+.+..
T Consensus 298 ia~~A~~~gi~~~~~~~~es 317 (400)
T 3mwc_A 298 IYKIATDNGIKLWGGTMPES 317 (400)
T ss_dssp HHHHHHHTTCEEEECCSCCC
T ss_pred HHHHHHHcCCEEEecCCCCC
Confidence 99999999999988765543
|
| >3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} | Back alignment and structure |
|---|
Probab=91.42 E-value=3.7 Score=35.56 Aligned_cols=153 Identities=9% Similarity=0.019 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+.+.|++.|..--.-. -..+...-+++++.-.+++-|.-+... .++++...+ +-+.|
T Consensus 145 ~~e~~~~~a~~~~~~G~~~iKiK~G~~-~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~~-~~~~l 212 (378)
T 3eez_A 145 SVEETRAVIDRYRQRGYVAHSVKIGGD-VERDIARIRDVEDIREPGEIVLYDVNR----------GWTRQQALR-VMRAT 212 (378)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHTTSCCTTCEEEEECTT----------CCCHHHHHH-HHHHT
T ss_pred CHHHHHHHHHHHHhCCCCEEEeccCCC-HHHHHHHHHHHHHHcCCCceEEEECCC----------CCCHHHHHH-HHHHh
Confidence 677888888899999999998643221 012233334555433345555555422 244544332 22334
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeE-EEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++ ++..|-. .++.+.+++++-.|.- .|=+-++.+.++++++...++++|+..+-.-. ....++
T Consensus 213 ~~~~i------~iEqP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 213 EDLHV------MFEQPGE------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARM 280 (378)
T ss_dssp GGGTC------CEECCSS------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHH
T ss_pred ccCCe------EEecCCC------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHH
Confidence 55543 4445432 4677788877755543 34466888999999988889999997655422 122789
Q ss_pred HHHHHHhCCcEEecccCcc
Q 025707 198 VPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~ 216 (249)
.+.|+++|+.++..+.+..
T Consensus 281 a~~A~~~g~~~~~~~~~es 299 (378)
T 3eez_A 281 RDIALTHGIDMFVMATGGS 299 (378)
T ss_dssp HHHHHHTTCEEEEECSSCS
T ss_pred HHHHHHcCCEEEcCCCCCC
Confidence 9999999999986655433
|
| >1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A | Back alignment and structure |
|---|
Probab=91.42 E-value=5.7 Score=34.20 Aligned_cols=150 Identities=14% Similarity=0.119 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..-- +.....+.+ +++++.- +++-|.-.... .++.+. .+-++ .|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~-~~~~l~vDan~----------~~~~~~-~~~~~-~l 211 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKI--KPGWDVQPV-RATREAF-PDIRLTVDANS----------AYTLAD-AGRLR-QL 211 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC-TTSCEEEECTT----------CCCGGG-HHHHH-TT
T ss_pred CHHHHHHHHHHHHHhcccEEEEec--ChHHHHHHH-HHHHHHc-CCCeEEEeCCC----------CCCHHH-HHHHH-HH
Confidence 567777888888999999987532 222334444 5555422 45444444311 244555 33333 36
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.+++++|+ .|-.. +.++.+.+++++-.|. ..|=+-++.+.++++++....+++|+..+-.-.- ...++
T Consensus 212 ~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 282 (375)
T 1r0m_A 212 DEYDLTYIE-----QPLAW----DDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRV 282 (375)
T ss_dssp GGGCCSCEE-----CCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHH
T ss_pred HhCCCcEEE-----CCCCc----ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHH
Confidence 777776654 44322 2355666776654443 3344567889999999888899999977664321 12789
Q ss_pred HHHHHHhCCcEEecccC
Q 025707 198 VPLCRELGIGIVPYCPL 214 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (249)
.+.|+++|+.++..+-+
T Consensus 283 ~~~A~~~g~~~~~~~~~ 299 (375)
T 1r0m_A 283 HDVAQSFGAPVWCGGML 299 (375)
T ss_dssp HHHHHHTTCCEEECCCC
T ss_pred HHHHHHcCCcEEecCcc
Confidence 99999999996554443
|
| >3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A* | Back alignment and structure |
|---|
Probab=91.27 E-value=6.8 Score=33.94 Aligned_cols=159 Identities=13% Similarity=0.093 Sum_probs=97.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|-.--... ...+...-+++++.-.+++-|.-.... .++++...+ +-+.|
T Consensus 142 ~~e~~~~~a~~~~~~Gf~~~KlK~g~~-~~~d~~~v~avR~a~g~~~~L~vDaN~----------~w~~~~A~~-~~~~l 209 (379)
T 3r0u_A 142 NVAETIQNIQNGVEANFTAIKVKTGAD-FNRDIQLLKALDNEFSKNIKFRFDANQ----------GWNLAQTKQ-FIEEI 209 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSC-HHHHHHHHHHHHHHCCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeecCCC-HHHHHHHHHHHHHhcCCCCeEEEeCCC----------CcCHHHHHH-HHHHH
Confidence 567788888888999999997643321 112333344555522233333333211 244443332 22233
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+..+ .++.++..|-...+ ++.+.++++.-.| -..|=+-++...+.++++....+++|+..+-.-. ....++
T Consensus 210 ~~~~---~~l~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~i 282 (379)
T 3r0u_A 210 NKYS---LNVEIIEQPVKYYD----IKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKI 282 (379)
T ss_dssp HTSC---CCEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcC---CCcEEEECCCCccc----HHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHH
Confidence 3311 46677777755433 5666677665333 3556677899999999988888999997655432 112779
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+..+
T Consensus 283 a~~A~~~gi~~~~~~~~es~ 302 (379)
T 3r0u_A 283 KKLADSAGISCMVGCMMESP 302 (379)
T ss_dssp HHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHcCCEEEEeCCCccH
Confidence 99999999999988776443
|
| >3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A | Back alignment and structure |
|---|
Probab=91.16 E-value=4.3 Score=35.27 Aligned_cols=155 Identities=12% Similarity=-0.071 Sum_probs=97.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCc----CCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKY----GPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Y----g~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~ 115 (249)
+.++..+.++.+.+.|++.|-.--.. ++-..+...-+++++.-.+++-|.-.... .++++. .
T Consensus 145 ~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~~~~L~vDaN~----------~~~~~~----A 210 (386)
T 3fv9_G 145 TPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADANN----------GLTVEH----A 210 (386)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCTTCEEEEECTT----------CCCHHH----H
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHH----H
Confidence 57888888889999999999754321 11012223334555432345555554322 234433 3
Q ss_pred HHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-ch
Q 025707 116 EASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DI 193 (249)
Q Consensus 116 ~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~ 193 (249)
.+.+++|. +.+++ ++..|-. .++.+.+++++-.|. ..|=+.++...+.++++...++++|+..+..-. ..
T Consensus 211 ~~~~~~l~-~~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~ 282 (386)
T 3fv9_G 211 LRMLSLLP-PGLDI-VLEAPCA------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITP 282 (386)
T ss_dssp HHHHHHSC-SSCCC-EEECCCS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHH
T ss_pred HHHHHHhh-ccCCc-EEecCCC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHHH
Confidence 34455663 34566 7766643 356777787764443 445577889999999988889999997665432 11
Q ss_pred hhhHHHHHHHhCCcEEecccCcc
Q 025707 194 ENEIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 194 ~~~~~~~~~~~gi~v~a~spl~~ 216 (249)
..++.+.|+++|+.++..+.+..
T Consensus 283 ~~~i~~~A~~~gi~~~~~~~~es 305 (386)
T 3fv9_G 283 MLRQRAIAAAAGMVMSVQDTVGS 305 (386)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCC
T ss_pred HHHHHHHHHHcCCEEEeCCCCCC
Confidence 27799999999999986654443
|
| >2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A* | Back alignment and structure |
|---|
Probab=90.95 E-value=7.5 Score=33.86 Aligned_cols=155 Identities=10% Similarity=0.020 Sum_probs=94.2
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCC----cCC------------Cch-------HHHHHHHHHcCCCCCeEEEeccccc
Q 025707 39 LSEEDGISIIKHAFSKGITFFDTADK----YGP------------YTN-------EILLGKALKELPRENIQVATKFGFV 95 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dta~~----Yg~------------g~s-------e~~lg~~l~~~~r~~~~I~tK~~~~ 95 (249)
.+.++..+....+.+.|++.|..-.. +|. |.. ...+-+++++.-.+++-|.-....
T Consensus 149 ~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~- 227 (410)
T 2gl5_A 149 VTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHS- 227 (410)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTT-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCC-
Confidence 36788888888999999999985421 121 011 112222333311234444444321
Q ss_pred ccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHh
Q 025707 96 ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAH 174 (249)
Q Consensus 96 ~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~ 174 (249)
.++++...+-++. |+.++ +.++..|-... .++.+.+++++-.|--++- +.++.+.+++++
T Consensus 228 ---------~~~~~~ai~~~~~-l~~~~-----i~~iE~P~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i 288 (410)
T 2gl5_A 228 ---------LLGTNSAIQFAKA-IEKYR-----IFLYEEPIHPL----NSDNMQKVSRSTTIPIATGERSYTRWGYRELL 288 (410)
T ss_dssp ---------CSCHHHHHHHHHH-HGGGC-----EEEEECSSCSS----CHHHHHHHHHHCSSCEEECTTCCTTHHHHHHH
T ss_pred ---------CCCHHHHHHHHHH-HHhcC-----CCeEECCCChh----hHHHHHHHHhhCCCCEEecCCcCCHHHHHHHH
Confidence 2455555444433 56554 44566664332 3667777777655554443 446778999999
Q ss_pred hcCCceEEeeecCccccc-hhhhHHHHHHHhCCcEEeccc
Q 025707 175 AVHPITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 175 ~~~~~~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~sp 213 (249)
+....+++|+..+-.-.- ...++.+.|+++|+.++..+.
T Consensus 289 ~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 289 EKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp HTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred HcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 888899999987654321 127899999999999998766
|
| >2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A* | Back alignment and structure |
|---|
Probab=90.90 E-value=5.4 Score=34.23 Aligned_cols=155 Identities=12% Similarity=0.086 Sum_probs=91.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHH-HHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVR-SCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~-~~~~~s 118 (249)
+.++..+..+.+.+.|++.|..--.-. -.....+-+++++.-.+++-|.-+... .++.+... +-++ .
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~-~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-~ 208 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTN-VKEDVKRIEAVRERVGNDIAIRVDVNQ----------GWKNSANTLTALR-S 208 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTT----------TTBSHHHHHHHHH-T
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCC-HHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 466777888888999999998532111 011122233444311234444433311 23444443 3333 3
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARD-IENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~ 196 (249)
|+.++++++ ..|-.. +-++.+.++++.-.|--++- +-++++.++++++....+++|+..+-.-.- ...+
T Consensus 209 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 279 (369)
T 2p8b_A 209 LGHLNIDWI-----EQPVIA----DDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVK 279 (369)
T ss_dssp STTSCCSCE-----ECCBCT----TCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhCCCcEE-----ECCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHH
Confidence 555666544 444322 24677788887655544433 457888999999888899999976554221 1277
Q ss_pred HHHHHHHhCCcEEecccCc
Q 025707 197 IVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~ 215 (249)
+.+.|+++|+.++..+.+.
T Consensus 280 i~~~A~~~g~~~~~~~~~e 298 (369)
T 2p8b_A 280 LAHQAEMAGIECQVGSMVE 298 (369)
T ss_dssp HHHHHHHTTCEEEECCSSC
T ss_pred HHHHHHHcCCcEEecCCCc
Confidence 9999999999998876653
|
| >3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=90.79 E-value=7.7 Score=34.17 Aligned_cols=149 Identities=8% Similarity=0.044 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (249)
++..+....+.+.|++.|..--.-......+.+ +++++.-.+++-|.-... ..++.+...+-++. |+.
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~avG~d~~l~vDan----------~~~~~~eai~~~~~-L~~ 254 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGDAARVDIERV-RHVRKVLGDEVDILTDAN----------TAYTMADARRVLPV-LAE 254 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHH-HHHHHHHCTTSEEEEECT----------TCCCHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH-HHHHHhcCCCCEEEEECC----------CCCCHHHHHHHHHH-HHh
Confidence 666777788889999998753211101122333 344442123444443321 12456666555544 888
Q ss_pred cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCC-eeEE-EcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhHH
Q 025707 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEIV 198 (249)
Q Consensus 122 Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~~ 198 (249)
++++++. .|-.. +.++.+.+++++-. |--+ +=+.++.+.++++++....+++|+..+-.-.- ...++.
T Consensus 255 ~~i~~iE-----qP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia 325 (428)
T 3bjs_A 255 IQAGWLE-----EPFAC----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIA 325 (428)
T ss_dssp TTCSCEE-----CCSCT----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHH
T ss_pred cCCCEEE-----CCCCc----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHH
Confidence 8887653 44222 23677777776543 4333 33557889999999888899999987664321 127899
Q ss_pred HHHHHhCCcEEec
Q 025707 199 PLCRELGIGIVPY 211 (249)
Q Consensus 199 ~~~~~~gi~v~a~ 211 (249)
+.|+++|+.++..
T Consensus 326 ~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 326 AMASAYRIPINAH 338 (428)
T ss_dssp HHHHHTTCCBCCB
T ss_pred HHHHHcCCeEEec
Confidence 9999999998877
|
| >3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A* | Back alignment and structure |
|---|
Probab=90.73 E-value=6.8 Score=33.99 Aligned_cols=156 Identities=13% Similarity=0.063 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+++. |++.|-.--...+-..+...-+++++.-.+++-|.-.... .++++...+ +-+.
T Consensus 167 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~~~ 235 (383)
T 3toy_A 167 DARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQ----------SLDPAEATR-RIAR 235 (383)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCCHHHHHH-HHHH
Confidence 678888889999999 9999875432211122333344555422234444433321 244544333 3345
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+++++ +..|-...+ ++.+.+++++-.|. ..|=+.++...+.++++...++++|+..+-.-. ....+
T Consensus 236 l~~~~i~~-----iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ 306 (383)
T 3toy_A 236 LADYDLTW-----IEEPVPQEN----LSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLN 306 (383)
T ss_dssp HGGGCCSE-----EECCSCTTC----HHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHH
T ss_pred HHhhCCCE-----EECCCCcch----HHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 56666544 445543333 55667777664443 445567888899999888889999997665432 11278
Q ss_pred HHHHHHHhCCcEEecccCc
Q 025707 197 IVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~ 215 (249)
+.+.|+++|+.+...+.+.
T Consensus 307 ia~~A~~~gi~~~~h~~~~ 325 (383)
T 3toy_A 307 VAGQADAASIPMSSHILPE 325 (383)
T ss_dssp HHHHHHHHTCCBCCCSCHH
T ss_pred HHHHHHHcCCEEeecCHHH
Confidence 9999999999998776543
|
| >2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40} | Back alignment and structure |
|---|
Probab=90.66 E-value=3.3 Score=35.62 Aligned_cols=154 Identities=16% Similarity=0.002 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--. ++-+....+-+++++.-.+++-|.-+... .++.+... +.+
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g-~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~----~~~ 210 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKIS-GEPVTDAKRITAALANQQPDEFFIVDANG----------KLSVETAL----RLL 210 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECC-SCHHHHHHHHHHHTTTCCTTCEEEEECTT----------BCCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHhChheEEeecC-CCHHHHHHHHHHHHHhcCCCCEEEEECCC----------CcCHHHHH----HHH
Confidence 5677778888889999999875321 11011222233444422345555554321 23444332 334
Q ss_pred HHc-CCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 120 RRL-DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 120 ~~L-g~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
++| . ..++ ++..|-. .++.+.++++.-.|.-++- +-++++.++++++....+++|+..+-.-. ....+
T Consensus 211 ~~l~~--~~~i-~iE~P~~------~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 281 (371)
T 2ps2_A 211 RLLPH--GLDF-ALEAPCA------TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRR 281 (371)
T ss_dssp HHSCT--TCCC-EEECCBS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHH
T ss_pred HHHHh--hcCC-cCcCCcC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHH
Confidence 444 2 1244 5555532 4677888887655554443 44688899999988889999997665422 11267
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 282 i~~~A~~~g~~~~~~~~~es~ 302 (371)
T 2ps2_A 282 QRDICLAAGYSVSVQETCGSD 302 (371)
T ss_dssp HHHHHHHHTCEEEEECSSCCH
T ss_pred HHHHHHHcCCeEEecCCCcCH
Confidence 899999999999987765443
|
| >2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941} | Back alignment and structure |
|---|
Probab=90.53 E-value=5.9 Score=34.61 Aligned_cols=154 Identities=13% Similarity=0.075 Sum_probs=94.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC--CcCC-------Cc--------hHHHHHHHHHcCCCCCeEEEecccccccCCccc
Q 025707 40 SEEDGISIIKHAFSKGITFFDTAD--KYGP-------YT--------NEILLGKALKELPRENIQVATKFGFVELGFTSV 102 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~--~Yg~-------g~--------se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~ 102 (249)
+.++..+....+.+.|++.|..-. .||. +. ..+.+ +++++.-.+++-|.-....
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v-~avRea~G~d~~l~vDan~-------- 219 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARV-AAVREAVGPEVEVAIDMHG-------- 219 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHH-HHHHHHHCSSSEEEEECTT--------
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHH-HHHHHhcCCCCEEEEECCC--------
Confidence 467777888888999999987432 2332 11 11222 3334311234444444321
Q ss_pred ccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceE
Q 025707 103 IVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITA 181 (249)
Q Consensus 103 ~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~ 181 (249)
.++++...+-++. |+.+++++ +..|-.. +-++.+.+++++-.|--++- +.++.+.++++++....++
T Consensus 220 --~~~~~~a~~~~~~-l~~~~i~~-----iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 287 (410)
T 2qq6_A 220 --RFDIPSSIRFARA-MEPFGLLW-----LEEPTPP----ENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDY 287 (410)
T ss_dssp --CCCHHHHHHHHHH-HGGGCCSE-----EECCSCT----TCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred --CCCHHHHHHHHHH-HhhcCCCe-----EECCCCh----hhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 2456665554443 77777654 4455332 23677778877655544433 4568899999998888999
Q ss_pred EeeecCcccc-chhhhHHHHHHHhCCcEEecccC
Q 025707 182 VQLEWSLWAR-DIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 182 ~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~spl 214 (249)
+|+..+-.-. ....++.+.|+++|+.++..+..
T Consensus 288 v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 288 VMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp ECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 9997655322 11267899999999999887663
|
| >3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1} | Back alignment and structure |
|---|
Probab=90.52 E-value=5.9 Score=34.42 Aligned_cols=151 Identities=13% Similarity=0.041 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|-.--. .+...+.+ +++++.- .++-|.--... .++++.... + +.|
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv~--~~~d~~~v-~avR~~~-~~~~l~vDaN~----------~~~~~~A~~-~-~~l 212 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKIA--PGRDRAAI-KAVRLRY-PDLAIAADANG----------SYRPEDAPV-L-RQL 212 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECB--TTBSHHHH-HHHHHHC-TTSEEEEECTT----------CCCGGGHHH-H-HHG
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeC--cHHHHHHH-HHHHHHC-CCCeEEEECCC----------CCChHHHHH-H-HHH
Confidence 4788888999999999999854321 12333444 4454422 33444333211 234444332 3 334
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+ ++.++..|-...+ ++.+.++.+.-.| -..|=+.++...+.++++...++++|+..+-.-. ....++
T Consensus 213 ~~~-----~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i 283 (388)
T 3qld_A 213 DAY-----DLQFIEQPLPEDD----WFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLRA 283 (388)
T ss_dssp GGG-----CCSCEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhC-----CCcEEECCCCccc----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHH
Confidence 443 5566777655444 4556666665333 3557778899999999988888999997655432 112789
Q ss_pred HHHHHHhCCcEEecccCc
Q 025707 198 VPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (249)
.+.|+++|+.++..+.+.
T Consensus 284 a~~A~~~gi~~~~~~~~e 301 (388)
T 3qld_A 284 LDVAGEAGMAAWVGGMYE 301 (388)
T ss_dssp HHHHHHTTCEEEECCCCC
T ss_pred HHHHHHCCCeEEecCccc
Confidence 999999999998776543
|
| >4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A | Back alignment and structure |
|---|
Probab=90.39 E-value=3.5 Score=36.07 Aligned_cols=151 Identities=11% Similarity=0.140 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 41 EEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 41 ~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
.++..+.++.+++. |++.|-.--... ...+...-+++++.- +++-|.-.... .++++...+ +-+.|
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~~-~~~d~~~v~avR~~~-~~~~l~vDaN~----------~w~~~~A~~-~~~~l 235 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTTD-CAGDVAILRAVREAL-PGVNLRVDPNA----------AWSVPDSVR-AGIAL 235 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCSC-HHHHHHHHHHHHHHC-TTSEEEEECTT----------CSCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCCC-HHHHHHHHHHHHHhC-CCCeEEeeCCC----------CCCHHHHHH-HHHHH
Confidence 57788888889998 999997544321 122233334555522 55444443221 245544433 33455
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++.+ +..|-. -++.+.+++++-.| -..|=+.++...+.++++...++++|+..+-.-. ....++
T Consensus 236 ~~~~i~~-----iEqP~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~i 304 (398)
T 4dye_A 236 EELDLEY-----LEDPCV------GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKAL 304 (398)
T ss_dssp GGGCCSE-----EECCSS------HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcCCCE-----EcCCCC------CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHH
Confidence 6666544 444422 57778888776444 3445567888899999988889999997655432 112779
Q ss_pred HHHHHHhCCcEEecccCc
Q 025707 198 VPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (249)
.+.|+++|+.++..+.+.
T Consensus 305 a~~A~~~gi~~~~h~~~e 322 (398)
T 4dye_A 305 AAHCETFGLGMNLHSGGE 322 (398)
T ss_dssp HHHHHHHTCEEEECCSCC
T ss_pred HHHHHHcCCeEEEcCCcc
Confidence 999999999999887553
|
| >2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B | Back alignment and structure |
|---|
Probab=90.22 E-value=5.4 Score=34.42 Aligned_cols=152 Identities=10% Similarity=-0.023 Sum_probs=94.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--.-++-+....+-+++++.-.+++-|.-+... .++++. ..+.+
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~----a~~~~ 210 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAGLPDGHRVTFDVNR----------AWTPAI----AVEVL 210 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHSCCTTCEEEEECTT----------CCCHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC----------CCCHHH----HHHHH
Confidence 5677778888888999999986321111012222334455433335555555321 234432 33445
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
++|. .++ ++..|-. .++.+.+++++-.|--++- +-++++.++++++....+++|+..+-.-. ....++
T Consensus 211 ~~l~---~~i-~iEqP~~------d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i 280 (378)
T 2qdd_A 211 NSVR---ARD-WIEQPCQ------TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQI 280 (378)
T ss_dssp TSCC---CCC-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHhC---CCc-EEEcCCC------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHH
Confidence 5553 456 6655532 5778888887755554433 45678899999988889999997665422 112679
Q ss_pred HHHHHHhCCcEEecccCc
Q 025707 198 VPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (249)
.+.|+++|+.++..+.+.
T Consensus 281 ~~~A~~~g~~~~~~~~~e 298 (378)
T 2qdd_A 281 RDFGVSVGWQMHIEDVGG 298 (378)
T ss_dssp HHHHHHHTCEEEECCSSC
T ss_pred HHHHHHcCCeEEecCCCC
Confidence 999999999999886543
|
| >2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=90.12 E-value=4.8 Score=34.56 Aligned_cols=150 Identities=15% Similarity=0.107 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..-- +.....+.+ +++++.- +++-|.-.... .++.+. .+ +-+.|
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~-~~~~l~vDan~----------~~~~~~-~~-~~~~l 204 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKI--KPGWDYEVL-KAVREAF-PEATLTADANS----------AYSLAN-LA-QLKRL 204 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC-TTSCEEEECTT----------CCCGGG-HH-HHHGG
T ss_pred CHHHHHHHHHHHHHhhhheeeeec--ChhHHHHHH-HHHHHHc-CCCeEEEecCC----------CCCHHH-HH-HHHHH
Confidence 567777888888999999987532 222334444 5555422 34333333211 234555 33 33347
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++++|+ .|-.. +.++.+.+++++-.|. ..|=+-++...++++++....+++|+..+-.-. ....++
T Consensus 205 ~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 275 (369)
T 2zc8_A 205 DELRLDYIE-----QPLAY----DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRV 275 (369)
T ss_dssp GGGCCSCEE-----CCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhCCCcEEE-----CCCCc----ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHH
Confidence 777766655 44322 2355666776654443 334456788999999988888999997655322 112789
Q ss_pred HHHHHHhCCcEEecccC
Q 025707 198 VPLCRELGIGIVPYCPL 214 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (249)
.+.|+++|+.++..+-+
T Consensus 276 ~~~A~~~g~~~~~~~~~ 292 (369)
T 2zc8_A 276 HALAESAGIPLWMGGML 292 (369)
T ss_dssp HHHHHHTTCCEEECCCC
T ss_pred HHHHHHcCCcEEecCcc
Confidence 99999999996555444
|
| >4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A* | Back alignment and structure |
|---|
Probab=90.11 E-value=8.9 Score=33.36 Aligned_cols=153 Identities=11% Similarity=0.074 Sum_probs=93.5
Q ss_pred CHHHHHHHH-HHHHHcCCCeEeCCCCcC------CCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHH
Q 025707 40 SEEDGISII-KHAFSKGITFFDTADKYG------PYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVR 112 (249)
Q Consensus 40 ~~~~~~~~l-~~A~~~Gi~~~Dta~~Yg------~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~ 112 (249)
+.++..+.+ +.+++.|++.|-.--... +-..+...-+++++.-.+++-|.-.... .++++...
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~ 208 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANN----------GYSVGGAI 208 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTT----------CCCHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHH
Confidence 567777777 888999999997643210 0012223334555421223333333221 24555443
Q ss_pred HHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc
Q 025707 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR 191 (249)
Q Consensus 113 ~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~ 191 (249)
+ +-+.|+.+++++|. .|-... .++.+.+++++-.|. ..|=+-++...++++++.. ++++|+..+-.-.
T Consensus 209 ~-~~~~L~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~~k~~~~GG 277 (393)
T 4dwd_A 209 R-VGRALEDLGYSWFE-----EPVQHY----HVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRMVQPDIVKMGG 277 (393)
T ss_dssp H-HHHHHHHTTCSEEE-----CCSCTT----CHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCEECCCTTTTTH
T ss_pred H-HHHHHHhhCCCEEE-----CCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCEEEeCccccCC
Confidence 3 33466778776554 443322 356677777764443 3344668889999998888 9999998766532
Q ss_pred -chhhhHHHHHHHhCCcEEeccc
Q 025707 192 -DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 192 -~~~~~~~~~~~~~gi~v~a~sp 213 (249)
....++.+.|+++|+.+...+.
T Consensus 278 it~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 278 ITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp HHHHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHHHHHHHHHcCCEEeecCC
Confidence 1127899999999999997776
|
| >3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A* | Back alignment and structure |
|---|
Probab=89.97 E-value=8.7 Score=33.06 Aligned_cols=153 Identities=14% Similarity=0.058 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+..+.+++. |++.|-.--.-.+...+...-+++++.-.+++-|.-.... .++.+... +.
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~----~~ 216 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNG----------KWDLPTCQ----RF 216 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTT----------CCCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCC----------CCCHHHHH----HH
Confidence 577788888899999 9999976432111122333445555522234444444321 24444432 23
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
++.|. ..++.++..|-...+ ++.+.+++++-.|. ..|=+-++...+.++++...++++|+..+-.-. ....+
T Consensus 217 ~~~l~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 290 (372)
T 3tj4_A 217 CAAAK--DLDIYWFEEPLWYDD----VTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQ 290 (372)
T ss_dssp HHHTT--TSCEEEEESCSCTTC----HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred HHHHh--hcCCCEEECCCCchh----HHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 33442 346677777654333 56667777654443 445577889999999988889999998665432 11278
Q ss_pred HHHHHHHhCCcEEecc
Q 025707 197 IVPLCRELGIGIVPYC 212 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~s 212 (249)
+.+.|+++|+.++..+
T Consensus 291 ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 291 VADLALAHRLPVVPHA 306 (372)
T ss_dssp HHHHHHHTTCCBCCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 9999999999998765
|
| >3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans} | Back alignment and structure |
|---|
Probab=89.97 E-value=3.4 Score=35.79 Aligned_cols=156 Identities=10% Similarity=0.052 Sum_probs=91.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|-.--.-.+-..+...-+++++.-.+++-|.-.... .++.+...+ +-+.|
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~A~~-~~~~l 214 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQ----------ALTPFGAMK-ILRDV 214 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEECTT----------CCCTTTHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CcCHHHHHH-HHHHH
Confidence 4566667778888899999976432211012333334555421233334333321 123333222 34566
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++++|+ .|-... -++.+.+++++-.|. ..|=+-++...+.++++...++++|+..+-.-. ....++
T Consensus 215 ~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i 285 (377)
T 3my9_A 215 DAFRPTFIE-----QPVPRR----HLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSL 285 (377)
T ss_dssp HTTCCSCEE-----CCSCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHH
T ss_pred hhcCCCEEE-----CCCCcc----CHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 677776654 443322 356677777654443 445567888999999988889999997655422 112778
Q ss_pred HHHHHHhCCcEEecccCc
Q 025707 198 VPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (249)
.+.|+++|+.++..+.+.
T Consensus 286 ~~~a~~~gi~~~~~~~~e 303 (377)
T 3my9_A 286 MAIADTAGLPGYGGTLWE 303 (377)
T ss_dssp HHHHHHHTCCEECCEECC
T ss_pred HHHHHHcCCeEecCCCCC
Confidence 999999999997655443
|
| >2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=89.74 E-value=9.5 Score=33.14 Aligned_cols=151 Identities=11% Similarity=0.048 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCC--CCcCCC--chHHHHHHHHHcCCCCCeEEEecccccccCCcccccCC--CHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTA--DKYGPY--TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKG--TPEYVRS 113 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta--~~Yg~g--~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~--s~~~i~~ 113 (249)
+.++..+....+.+.|++.|..- + .|.. +....+-+++++.-.+++-|.-+... .+ +.+...+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~sp-vG~~~~~~~~e~v~avr~a~G~d~~l~vDan~----------~~~~~~~~a~~ 213 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGP-IGRGTVAADADQIMAAREGLGPDGDLMVDVGQ----------IFGEDVEAAAA 213 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTT-TTSSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTTTCHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCC-CCCCHHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCCHHHHHH
Confidence 57778888888999999999853 2 2311 11222233333311234445444321 24 5665554
Q ss_pred HHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHH-cCCeeEEEc-CCCCHHHHHHHhhcCCceEEeeecCcccc
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE-EGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR 191 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~-~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~ 191 (249)
-++. |+.++++++ ..|-.. +.++.+.++++ .-.|.-++- +.++.+.++++++....+++|+..+-.-.
T Consensus 214 ~~~~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 283 (401)
T 2hzg_A 214 RLPT-LDAAGVLWL-----EEPFDA----GALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGG 283 (401)
T ss_dssp THHH-HHHTTCSEE-----ECCSCT----TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTS
T ss_pred HHHH-HHhcCCCEE-----ECCCCc----cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCC
Confidence 4444 778887654 444322 34777788887 555544443 44678899999988889999997665422
Q ss_pred -chhhhHHHHHHHhCCcEEec
Q 025707 192 -DIENEIVPLCRELGIGIVPY 211 (249)
Q Consensus 192 -~~~~~~~~~~~~~gi~v~a~ 211 (249)
....++.+.|+++|+.++..
T Consensus 284 it~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 284 LGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEecC
Confidence 11267999999999999876
|
| >3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP} | Back alignment and structure |
|---|
Probab=89.63 E-value=4.2 Score=35.45 Aligned_cols=157 Identities=12% Similarity=0.033 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC--------CchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGP--------YTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEY 110 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~--------g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~ 110 (249)
+.++..+.++.+++.|++.|=.--...+ -..+...-+++++ .+ ++-|.--. +. .++++.
T Consensus 165 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~~--d~~L~vDa--N~--------~w~~~~ 232 (393)
T 3u9i_A 165 SVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAP--TARLILDG--NC--------GYTAPD 232 (393)
T ss_dssp -CHHHHHHHHHHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHST--TSEEEEEC--CS--------CCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHCC--CCeEEEEc--cC--------CCCHHH
Confidence 4567778888889999999865432221 0112223334444 43 23332221 11 244443
Q ss_pred HHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcc
Q 025707 111 VRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLW 189 (249)
Q Consensus 111 i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~ 189 (249)
. .+.+++|.-+.+++.++..|-...+ ++.+.++.++-.| -+.|=+.++...+.+++....++++|+..+.
T Consensus 233 A----~~~~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~- 303 (393)
T 3u9i_A 233 A----LRLLDMLGVHGIVPALFEQPVAKDD----EEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMK- 303 (393)
T ss_dssp H----HHHHHTTTTTTCCCSEEECCSCTTC----TTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH-
T ss_pred H----HHHHHHHhhCCCCeEEEECCCCCCc----HHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccc-
Confidence 3 2344566323457788888755433 3456666665333 3567788999999999988889999998665
Q ss_pred ccc-hhhhHHHHHHHhCCcEEecccCccc
Q 025707 190 ARD-IENEIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 190 ~~~-~~~~~~~~~~~~gi~v~a~spl~~G 217 (249)
-.- ...++.+.|+++|+.++..+.+..+
T Consensus 304 GGit~~~~ia~~A~~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 304 CGIVEALDIAAIARTAGLHLMIGGMVESL 332 (393)
T ss_dssp HCHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred cCHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 321 1277899999999999988776443
|
| >2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=89.52 E-value=9.7 Score=32.94 Aligned_cols=154 Identities=10% Similarity=0.072 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC------------cCCCchHH------HHHHHHHcCCCCCeEEEecccccccCCcc
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK------------YGPYTNEI------LLGKALKELPRENIQVATKFGFVELGFTS 101 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~------------Yg~g~se~------~lg~~l~~~~r~~~~I~tK~~~~~~~~~~ 101 (249)
+.++..+....+.+.|++.|..-.. || |..+. .+-+++++.-.+++-|.-....
T Consensus 137 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~g-g~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~------- 208 (392)
T 2poz_A 137 TPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRR-SMSAEAIELAYRRVKAVRDAAGPEIELMVDLSG------- 208 (392)
T ss_dssp SHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTT-BCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT-------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccccccccccccC-CcchhhHHHHHHHHHHHHHhcCCCCEEEEECCC-------
Confidence 6777888888899999999874322 22 11111 1222333311234444444321
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCCHHHHHHHhhcCCce
Q 025707 102 VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPIT 180 (249)
Q Consensus 102 ~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~ 180 (249)
.++++...+-++. |+.++ +.++..|-... .++.+.+++++-.|.-++- +-++++.++++++....+
T Consensus 209 ---~~~~~~a~~~~~~-l~~~~-----i~~iE~P~~~~----~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d 275 (392)
T 2poz_A 209 ---GLTTDETIRFCRK-IGELD-----ICFVEEPCDPF----DNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACG 275 (392)
T ss_dssp ---CSCHHHHHHHHHH-HGGGC-----EEEEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCS
T ss_pred ---CCCHHHHHHHHHH-HHhcC-----CCEEECCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCC
Confidence 2455554444443 55554 44566654332 3667777777655554444 345678899999888899
Q ss_pred EEeeecCccccc-hhhhHHHHHHHhCCcEEecccC
Q 025707 181 AVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 181 ~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~spl 214 (249)
++|+..+-.-.- ...++.+.|+++|+.++..+.+
T Consensus 276 ~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 276 IIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp EECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred EEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 999977654321 1278999999999999987765
|
| >2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A | Back alignment and structure |
|---|
Probab=89.15 E-value=8 Score=34.14 Aligned_cols=151 Identities=11% Similarity=0.107 Sum_probs=90.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+....+.+.|++.|..--.-......+.+ +++++.-.+++-|.-... ..++.+...+-++. |
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~a~G~d~~l~vDan----------~~~~~~~a~~~~~~-l 265 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGANVQDDIRRC-RLARAAIGPDIAMAVDAN----------QRWDVGPAIDWMRQ-L 265 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHHHCSSSEEEEECT----------TCCCHHHHHHHHHT-T
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCHHHHHHHH-HHHHHhcCCCCeEEEECC----------CCCCHHHHHHHHHH-H
Confidence 67778888889999999998753211000122222 444441123344433321 12456655444444 6
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENE 196 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~ 196 (249)
+.++++++ ..|-.. +.++.+.++++. +.| -..|=+.+++..++++++....+++|+..+-.-.- ....
T Consensus 266 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ 336 (441)
T 2hxt_A 266 AEFDIAWI-----EEPTSP----DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLA 336 (441)
T ss_dssp GGGCCSCE-----ECCSCT----TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHHH
T ss_pred HhcCCCee-----eCCCCH----HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcceeCCHHHHHH
Confidence 77776654 444332 235666677665 223 34455678889999999888899999987664321 1267
Q ss_pred HHHHHHHhCCcEEec
Q 025707 197 IVPLCRELGIGIVPY 211 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~ 211 (249)
+...|+++|+.+...
T Consensus 337 ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 337 ILLLAAKFGVRVFPH 351 (441)
T ss_dssp HHHHHHHTTCEECCC
T ss_pred HHHHHHHcCCeEEEe
Confidence 999999999998643
|
| >4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans} | Back alignment and structure |
|---|
Probab=88.85 E-value=11 Score=32.72 Aligned_cols=155 Identities=11% Similarity=0.030 Sum_probs=97.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+++.|++.|..--.-.+-..+...-+++++ ...+++-|.-.... .++++. ..+.
T Consensus 164 ~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~gg~~~~L~vDaN~----------~w~~~~----A~~~ 229 (391)
T 4e8g_A 164 QPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERIRGTGTRLAVDGNR----------SLPSRD----ALRL 229 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHHTTTTCEEEEECTT----------CCCHHH----HHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHhCCCCCeEEEeCCC----------CCCHHH----HHHH
Confidence 57888888899999999998754321110122233344443 22144444444321 234433 3344
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
+++|. ..++ ++..|-+ .++.+.++++.-.|. ..|=+.++...+.++++...++++|+..+-.-. ....+
T Consensus 230 ~~~L~--~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ 300 (391)
T 4e8g_A 230 SRECP--EIPF-VLEQPCN------TLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAA 300 (391)
T ss_dssp HHHCT--TSCE-EEESCSS------SHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHH
T ss_pred HHHHh--hcCe-EEecCCc------cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 55664 3377 7777721 366777887764443 456677899999999988889999997655432 11277
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 301 ia~~A~~~gi~~~~~~~~es~ 321 (391)
T 4e8g_A 301 FRDICEARALPHSCDDAWGGD 321 (391)
T ss_dssp HHHHHHHTTCCEEEECSSCSH
T ss_pred HHHHHHHcCCeEEeCCcCCCH
Confidence 999999999999887665443
|
| >3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A | Back alignment and structure |
|---|
Probab=88.54 E-value=5.9 Score=33.92 Aligned_cols=157 Identities=10% Similarity=0.035 Sum_probs=96.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+++.|++.|..--... ...+...-+++++.-.+++-|.-.... .++++...+ +-+.|
T Consensus 140 ~~~~~~~~a~~~~~~G~~~~K~K~G~~-~~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~~-~~~~l 207 (356)
T 3ro6_B 140 PVEETLAEAREHLALGFRVLKVKLCGD-EEQDFERLRRLHETLAGRAVVRVDPNQ----------SYDRDGLLR-LDRLV 207 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHHHHHTTSSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCC-HHHHHHHHHHHHHHhCCCCEEEEeCCC----------CCCHHHHHH-HHHHH
Confidence 577788888899999999998643221 112333334555421234444444321 244554433 34567
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcC-CceEEeeecCcccc-chhhh
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVH-PITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~-~~~~~q~~~n~~~~-~~~~~ 196 (249)
+.+++++|. .|-... .++.+.+++++-.|. ..|=+-++...+.++++.. .++++|+..+-.-. ....+
T Consensus 208 ~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 278 (356)
T 3ro6_B 208 QELGIEFIE-----QPFPAG----RTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARR 278 (356)
T ss_dssp HHTTCCCEE-----CCSCTT----CHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHH
T ss_pred HhcCCCEEE-----CCCCCC----cHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHH
Confidence 778877664 443322 245555555542332 4455678889999999887 89999997655422 11278
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 279 i~~~a~~~gi~~~~~~~~es~ 299 (356)
T 3ro6_B 279 IATIAETAGIDLMWGCMDESR 299 (356)
T ss_dssp HHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHcCCEEEecCCcccH
Confidence 999999999999987766443
|
| >3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A* | Back alignment and structure |
|---|
Probab=88.49 E-value=12 Score=32.51 Aligned_cols=152 Identities=8% Similarity=-0.021 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+.+.|++.|..--.-. -......-+++++.-.+++-|.-+... .++.+...+ +-+.|
T Consensus 151 ~~e~~~~~a~~~~~~G~~~iKiKvG~~-~~~d~~~v~avR~a~g~d~~l~vDan~----------~~~~~~A~~-~~~~l 218 (389)
T 3ozy_A 151 TPDQAADELAGWVEQGFTAAKLKVGRA-PRKDAANLRAMRQRVGADVEILVDANQ----------SLGRHDALA-MLRIL 218 (389)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEeeccCCC-HHHHHHHHHHHHHHcCCCceEEEECCC----------CcCHHHHHH-HHHHH
Confidence 678888889999999999998643211 112233334555422234444444321 245554433 33466
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHH-HcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLV-EEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~-~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
+.+++++| ..|-... -++.+.+++ +.-.|.-. |=+-++.+.++++++...++++|+..+-.-. ....+
T Consensus 219 ~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 289 (389)
T 3ozy_A 219 DEAGCYWF-----EEPLSID----DIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALA 289 (389)
T ss_dssp HHTTCSEE-----ESCSCTT----CHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHH
T ss_pred HhcCCCEE-----ECCCCcc----cHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 77877655 4443322 366677887 65555433 3355778889999988889999998766532 12278
Q ss_pred HHHHHHHhCCcEEecc
Q 025707 197 IVPLCRELGIGIVPYC 212 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~s 212 (249)
+.+.|+++|+.++..+
T Consensus 290 ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 290 ISASAASAHLAWNPHT 305 (389)
T ss_dssp HHHHHHHTTCEECCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 9999999999998775
|
| >1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A* | Back alignment and structure |
|---|
Probab=88.49 E-value=11 Score=32.71 Aligned_cols=152 Identities=12% Similarity=-0.025 Sum_probs=91.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..--.-++-+....+-+++++.-.+++-|.-.... .++.+...+-++. |
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-l 233 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEIGKDAQLAVDANG----------RFNLETGIAYAKM-L 233 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHHTTTCEEEEECTT----------CCCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 5677888888889999999874321111012222233444311234444433311 2455555444443 6
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE-cCCCCHHHHHHHhhcC----CceEEeeecCccccc-h
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVH----PITAVQLEWSLWARD-I 193 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~-~ 193 (249)
+.+++++ +..|-.. +.++.+.+++++-.|.-.+ =+-++.+.++++++.. ..+++|+..+-.-.- .
T Consensus 234 ~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit~ 304 (392)
T 1tzz_A 234 RDYPLFW-----YEEVGDP----LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLCE 304 (392)
T ss_dssp TTSCCSE-----EECCSCT----TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHHH
T ss_pred HHcCCCe-----ecCCCCh----hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccCCHHH
Confidence 6666654 4454332 3467777887765554443 3457888999998887 789999977654321 1
Q ss_pred hhhHHHHHHHhCCc---EEec
Q 025707 194 ENEIVPLCRELGIG---IVPY 211 (249)
Q Consensus 194 ~~~~~~~~~~~gi~---v~a~ 211 (249)
..++.+.|+++|+. ++..
T Consensus 305 ~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 305 YQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp HHHHHHHHHHTTCCGGGBCCS
T ss_pred HHHHHHHHHHCCCCCceEeec
Confidence 27899999999999 7776
|
| >1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A* | Back alignment and structure |
|---|
Probab=88.23 E-value=11 Score=32.12 Aligned_cols=151 Identities=11% Similarity=0.001 Sum_probs=91.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|..-- +.....+.+. ++++.-.+++-|.-.. +. .++.+. .+-+ +.|
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~--~~~~~~e~v~-avr~~~g~~~~l~vDa--n~--------~~~~~~-~~~~-~~l 205 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPVR-AVRERFGDDVLLQVDA--NT--------AYTLGD-APQL-ARL 205 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHHH-HHHHHHCTTSEEEEEC--TT--------CCCGGG-HHHH-HTT
T ss_pred CHHHHHHHHHHHHHhCccEEEEec--CchhHHHHHH-HHHHhcCCCceEEEec--cC--------CCCHHH-HHHH-HHH
Confidence 567777888888899999987532 2223344443 4443111233333222 11 245555 3333 337
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.+++++ +..|-.. +.++.+.+++++-.|.-. +=+-++.+.++++++....+++|+..+-.-.- ...++
T Consensus 206 ~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 276 (368)
T 1sjd_A 206 DPFGLLL-----IEQPLEE----EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRV 276 (368)
T ss_dssp GGGCCSE-----EECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred HhcCCCe-----EeCCCCh----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 7777664 4454322 236777778776444433 33557889999999888899999977664321 12789
Q ss_pred HHHHHHhCCcEEecccC
Q 025707 198 VPLCRELGIGIVPYCPL 214 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (249)
.+.|+++|+.++..+.+
T Consensus 277 ~~~A~~~g~~~~~~~~~ 293 (368)
T 1sjd_A 277 HDVCAAHGIPVWCGGMI 293 (368)
T ss_dssp HHHHHHTTCCEEECCCC
T ss_pred HHHHHHcCCcEEeCCcc
Confidence 99999999996555444
|
| >1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=87.86 E-value=12 Score=32.09 Aligned_cols=153 Identities=11% Similarity=-0.002 Sum_probs=93.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCC--CCc-CCC---chHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTA--DKY-GPY---TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta--~~Y-g~g---~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~ 113 (249)
+.++..+..+.+.+.|++.|..- ..| +.. +....+-+++++.-.+++-|.-+... .++++...+
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~----------~~~~~~a~~ 218 (382)
T 1rvk_A 149 TPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFH----------WYSRTDALA 218 (382)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCT----------TCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHHH
Confidence 57778888888899999998742 211 100 11122224444311234444444321 245665554
Q ss_pred HHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCC-HHHHHHHhhcCCceEEeeecCcccc
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEAS-PDTIRRAHAVHPITAVQLEWSLWAR 191 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~-~~~l~~~~~~~~~~~~q~~~n~~~~ 191 (249)
-+ +.|+.++++++ ..|-.. +.++.+.++++.-.|--++- +-++ .+.++++++....+++|+..+-.-.
T Consensus 219 ~~-~~l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 288 (382)
T 1rvk_A 219 LG-RGLEKLGFDWI-----EEPMDE----QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGG 288 (382)
T ss_dssp HH-HHHHTTTCSEE-----ECCSCT----TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTS
T ss_pred HH-HHHHhcCCCEE-----eCCCCh----hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCC
Confidence 44 35777777644 444332 23667777777655544433 4567 8899999998889999997655422
Q ss_pred -chhhhHHHHHHHhCCcEEecc
Q 025707 192 -DIENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 192 -~~~~~~~~~~~~~gi~v~a~s 212 (249)
....++.+.|+++|+.++..+
T Consensus 289 it~~~~i~~~A~~~g~~~~~~~ 310 (382)
T 1rvk_A 289 ITPALKTMHLAEAFGMECEVHG 310 (382)
T ss_dssp HHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHHcCCeEeecC
Confidence 112789999999999999873
|
| >3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A | Back alignment and structure |
|---|
Probab=87.82 E-value=13 Score=32.40 Aligned_cols=151 Identities=13% Similarity=0.131 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCC-----------chHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPY-----------TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTP 108 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g-----------~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~ 108 (249)
+.++..+.++.+.+.|++.|-. -|.. ......-+++++.-.+++-|.-.... .++.
T Consensus 125 ~~e~~~~~a~~~~~~G~~~iKl---~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~----------~~~~ 191 (405)
T 3rr1_A 125 RPADVIAGMKALQAGGFDHFKL---NGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG----------RVSA 191 (405)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE---ESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS----------CBCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---ecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCC----------CCCH
Confidence 6788888999999999999987 2211 01122334555433344444433211 2445
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeE-EEcCCCCHHHHHHHhhcCCceEEeeecC
Q 025707 109 EYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPDTIRRAHAVHPITAVQLEWS 187 (249)
Q Consensus 109 ~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~n 187 (249)
+...+ +-+.|+.++++++ ..|-... .++.+.++++.-.|.- .|=+-++...++++++...++++|+..+
T Consensus 192 ~~A~~-~~~~L~~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~ 261 (405)
T 3rr1_A 192 PMAKV-LIKELEPYRPLFI-----EEPVLAE----QAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQPDLS 261 (405)
T ss_dssp HHHHH-HHHHHGGGCCSCE-----ECSSCCS----STHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTT
T ss_pred HHHHH-HHHHHHhcCCCEE-----ECCCCcc----cHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChh
Confidence 54433 3345677776655 4453322 3566778887655543 3446688899999998888999999876
Q ss_pred cccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 188 LWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 188 ~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
-.-. ....++.+.|+++|+.+...+.
T Consensus 262 ~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 262 HAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp TTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred hcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 6432 1127899999999999988764
|
| >2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A | Back alignment and structure |
|---|
Probab=87.59 E-value=7.9 Score=33.44 Aligned_cols=151 Identities=9% Similarity=0.002 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (249)
++..+....+.+.|++.|..--.-++-+.....-+++++.-.+++-|.-.... .++++...+-++ .|+.
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~-~l~~ 209 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTAGSSITMILDANQ----------SYDAAAAFKWER-YFSE 209 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHTTHH-HHTT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhhCCCCEEEEECCC----------CCCHHHHHHHHH-HHhh
Confidence 66777788888999999875321111011122223444311234444433321 245554433333 2444
Q ss_pred cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhHHH
Q 025707 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEIVP 199 (249)
Q Consensus 122 Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~~~ 199 (249)
+ -++.++..|-... .++.+.+++++-.|.-. |=+.++.+.++++++....+++|+..+-.-.- ...++.+
T Consensus 210 ~----~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 281 (382)
T 2gdq_A 210 W----TNIGWLEEPLPFD----QPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQ 281 (382)
T ss_dssp C----SCEEEEECCSCSS----CHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHH
T ss_pred c----cCCeEEECCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHH
Confidence 4 0344566664332 36677778776555433 33557889999999888899999987664321 1278999
Q ss_pred HHHHhCCcEEec
Q 025707 200 LCRELGIGIVPY 211 (249)
Q Consensus 200 ~~~~~gi~v~a~ 211 (249)
.|+++|+.++..
T Consensus 282 ~A~~~g~~~~~~ 293 (382)
T 2gdq_A 282 LARYFGVRASAH 293 (382)
T ss_dssp HHHHHTCEECCC
T ss_pred HHHHcCCEEeec
Confidence 999999998877
|
| >3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=87.53 E-value=10 Score=33.65 Aligned_cols=155 Identities=14% Similarity=0.167 Sum_probs=95.3
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
.+.++..+..+.+++. |++.|=.--...+...+...-+++++.- +++-|.--... .++++... +
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~-~~~~L~vDaN~----------~w~~~~Ai----~ 254 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAF-PGVPLRLDPNA----------AWTVETSK----W 254 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHS-TTCCEEEECTT----------CBCHHHHH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC-CCCcEeeeCCC----------CCCHHHHH----H
Confidence 4778888888888875 9999865432211112222334555422 33333322111 23443332 3
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~ 195 (249)
.+++|. ++ +.++..|- + -++.+.++++.-.| -..|-+.++...+.++++...++++|+..+-+-. ....
T Consensus 255 ~~~~L~-~~--l~~iEeP~---~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGitea~ 325 (445)
T 3va8_A 255 VAKELE-GI--VEYLEDPA---G---EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKSQ 325 (445)
T ss_dssp HHHHTT-TT--CSEEESCB---S---HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHH
T ss_pred HHHHHh-hh--cCeEeecC---c---CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCHHHHH
Confidence 445564 34 66777763 2 47777888776433 2556677888899999988889999997554321 1127
Q ss_pred hHHHHHHHhCCcEEecccCccc
Q 025707 196 EIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl~~G 217 (249)
.+.+.|+++|+.+...+....|
T Consensus 326 kia~lA~~~gv~v~~h~~~e~~ 347 (445)
T 3va8_A 326 TLASICATWGLRLSMHSNSHLG 347 (445)
T ss_dssp HHHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHHcCCEEEEeCCcccH
Confidence 8999999999999988876443
|
| >1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=87.28 E-value=14 Score=32.02 Aligned_cols=152 Identities=13% Similarity=0.050 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+.+.|++.|-.-- |.....+.+ +++++.- +++-|.--... .++++.. +-+ +.|
T Consensus 161 ~~e~~~~~a~~~~~~G~~~~KiKv--g~~~d~~~v-~avr~a~-~~~~l~vDaN~----------~~~~~~a-~~~-~~l 224 (393)
T 1wuf_A 161 NVETLLQLVNQYVDQGYERVKLKI--APNKDIQFV-EAVRKSF-PKLSLMADANS----------AYNREDF-LLL-KEL 224 (393)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--BTTBSHHHH-HHHHTTC-TTSEEEEECTT----------CCCGGGH-HHH-HTT
T ss_pred CHHHHHHHHHHHHHHhhHhheecc--ChHHHHHHH-HHHHHHc-CCCEEEEECCC----------CCCHHHH-HHH-HHH
Confidence 467777788888899999985321 112234444 5666532 34544433221 2344444 322 334
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.+ ++.++..|-...+ ++.+.++.++-.| -..|=+.++...+.++++...++++|+..+-.-.- ...++
T Consensus 225 ~~~-----~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i 295 (393)
T 1wuf_A 225 DQY-----DLEMIEQPFGTKD----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKI 295 (393)
T ss_dssp GGG-----TCSEEECCSCSSC----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHH
T ss_pred HhC-----CCeEEECCCCCcC----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHH
Confidence 444 5566767754433 4556677665443 24455678889999998888889999987664321 12789
Q ss_pred HHHHHHhCCcEEecccCcc
Q 025707 198 VPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~ 216 (249)
.+.|+++|+.++..+.+..
T Consensus 296 a~~A~~~gi~~~~~~~~es 314 (393)
T 1wuf_A 296 AEYCALNEILVWCGGMLEA 314 (393)
T ss_dssp HHHHHHTTCEEEECCCCCC
T ss_pred HHHHHHcCCeEEecCCccc
Confidence 9999999999988776544
|
| >3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A | Back alignment and structure |
|---|
Probab=86.57 E-value=15 Score=32.15 Aligned_cols=153 Identities=13% Similarity=0.106 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC--C----chHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGP--Y----TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~--g----~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~ 113 (249)
+.++..+..+.+.+.|++.|..--..+. | +.....-+++++.-.+++-|.-.... .++++...+
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~----------~~~~~~Ai~ 248 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYM----------GWNLDYAKR 248 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHHH
Confidence 6788888899999999999986543321 1 11222233444422234444444321 245554433
Q ss_pred HHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-
Q 025707 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR- 191 (249)
Q Consensus 114 ~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~- 191 (249)
+-+.|+.+++++| ..|-... -++.+.+++++-.|. ..|=+.++...++++++...++++|+..+-.-.
T Consensus 249 -~~~~Le~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGi 318 (412)
T 3stp_A 249 -MLPKLAPYEPRWL-----EEPVIAD----DVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGI 318 (412)
T ss_dssp -HHHHHGGGCCSEE-----ECCSCTT----CHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHH
T ss_pred -HHHHHHhcCCCEE-----ECCCCcc----cHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCH
Confidence 3345677776554 4453322 366778888775554 334566889999999998889999997655422
Q ss_pred chhhhHHHHHHHhCCcEEecc
Q 025707 192 DIENEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 192 ~~~~~~~~~~~~~gi~v~a~s 212 (249)
....++.+.|+++|+.++..+
T Consensus 319 t~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 319 TAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp HHHHHHHHHHHHHTCCBCCSS
T ss_pred HHHHHHHHHHHHcCCEEEecc
Confidence 112778999999999998766
|
| >4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.41 E-value=17 Score=32.15 Aligned_cols=152 Identities=8% Similarity=0.069 Sum_probs=92.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+++.|++.|-.--.-. -..+...-+++++.-.+++-|.-.... .++++...+- -+.|
T Consensus 201 ~~e~~~~~a~~~~~~Gf~~~KlKvG~~-~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~~-~~~L 268 (441)
T 4a35_A 201 SDDTLKQLCAQALKDGWTRFKVKVGAD-LQDDMRRCQIIRDMIGPEKTLMMDANQ----------RWDVPEAVEW-MSKL 268 (441)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSC-HHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCC-HHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHHHH-HHhh
Confidence 678888899999999999997543211 012222234454422233334333221 2444443222 2234
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHH----cCCeeEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chh
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE----EGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~----~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~ 194 (249)
+.+ ++.++..|-...++ +.+.++++ .+.=-..|=+.++...+.++++...++++|+..+-+-. ...
T Consensus 269 ~~~-----~~~~iEeP~~~~d~----~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d~~~~GGit~~ 339 (441)
T 4a35_A 269 AKF-----KPLWIEEPTSPDDI----LGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNEN 339 (441)
T ss_dssp GGG-----CCSEEECCSCTTCH----HHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCCTTTSSHHHHH
T ss_pred ccc-----CccEEeCCCCcccH----HHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEECccccCCHHHH
Confidence 444 55677777554443 44445554 35545667788999999999988889999998766432 122
Q ss_pred hhHHHHHHHhCCcEEecc
Q 025707 195 NEIVPLCRELGIGIVPYC 212 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~s 212 (249)
.++.+.|+++|+.+...+
T Consensus 340 ~kia~lA~~~gv~v~~H~ 357 (441)
T 4a35_A 340 LSVLLMAKKFEIPVCPHA 357 (441)
T ss_dssp HHHHHHHHHTTCCBCCCC
T ss_pred HHHHHHHHHcCCEEEEeC
Confidence 779999999999987543
|
| >2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=86.39 E-value=7.8 Score=33.22 Aligned_cols=158 Identities=9% Similarity=0.032 Sum_probs=96.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+..+.+.+.|++.|-.--...+...+...-+++++.-.+++.|.--... .++++...+-+ +.|
T Consensus 143 ~~~~~~~~~~~~~~~g~~~~K~Kvg~~~~~~d~~~v~avr~~~g~~~~l~vDaN~----------~~~~~~A~~~~-~~l 211 (370)
T 2chr_A 143 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQ----------AWDEQVASVYI-PEL 211 (370)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHHHHHHHHTTTTSEEEEECTT----------CCCTHHHHHHH-HHH
T ss_pred hhhhHHHHHHHHhhcccceeecccccCChHHHHHHHHHHHHhcCCCcEEEecCCC----------CCCHHHHHHHH-HHH
Confidence 5667777888888889998866544321112222233444422344444332211 23444433322 334
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.+ ++.++..|-...+ ++.+.+|+++-.|. ..|=+.++...+.++++...++++|+...-+-.- ...++
T Consensus 212 ~~~-----~~~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~i 282 (370)
T 2chr_A 212 EAL-----GVELIEQPVGREN----TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKI 282 (370)
T ss_dssp HTT-----TCCEEECCSCSSC----HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHH
T ss_pred Hhc-----CCceecCCCChhh----hhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHH
Confidence 444 4567777755444 45677777765543 4566778999999999888889999876544221 12779
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+.++
T Consensus 283 a~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 283 AAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHTCEECCCCCSCCH
T ss_pred HHHHHHcCCeEEeCCCcccH
Confidence 99999999999877766544
|
| >3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=86.37 E-value=15 Score=31.62 Aligned_cols=157 Identities=9% Similarity=-0.029 Sum_probs=89.4
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+....+++ .|++.|-.--.-.+-..+...-+++++.-.+++-|.-.... .++++...+ +-+.
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~~-~~~~ 215 (381)
T 3fcp_A 147 DTAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEALGDRASIRVDVNQ----------AWDAATGAK-GCRE 215 (381)
T ss_dssp CHHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHHTCTTCEEEEECTT----------CBCHHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHHH-HHHH
Confidence 34554555566665 69999875432211012233334555522344444444321 234544433 2345
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+++ .++..|-...+ ++.+.++++.-.| -..|=+.++...+.++++...++++|+..+-.-. ....+
T Consensus 216 l~~~~i-----~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ 286 (381)
T 3fcp_A 216 LAAMGV-----DLIEQPVSAHD----NAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLA 286 (381)
T ss_dssp HHHTTC-----SEEECCBCTTC----HHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHH
T ss_pred HhhcCc-----cceeCCCCccc----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHH
Confidence 566665 44555543333 5666777765333 3456677889999999988889999997655422 12377
Q ss_pred HHHHHHHhCCcEEecccCcc
Q 025707 197 IVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~ 216 (249)
+.+.|+++|+.++..+.+..
T Consensus 287 ia~~A~~~gi~~~~~~~~es 306 (381)
T 3fcp_A 287 LARVAQAAGIGLYGGTMLEG 306 (381)
T ss_dssp HHHHHHHHTCEEEECCSCCC
T ss_pred HHHHHHHcCCceecCCCCcc
Confidence 99999999999987766543
|
| >3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A* | Back alignment and structure |
|---|
Probab=86.01 E-value=5.1 Score=34.84 Aligned_cols=150 Identities=12% Similarity=0.035 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHcCCCeEeC--CCCcCCCch----HH--HHHHHHHc--CCCCCeEEEecccccccCCcccccCCCHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDT--ADKYGPYTN----EI--LLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYV 111 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dt--a~~Yg~g~s----e~--~lg~~l~~--~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i 111 (249)
++..+..+.+.+.|++.|-. +..|+.-.+ +. .+-+++++ .+.-.+.| -. + ..++++..
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g~d~~l~v--Da--n--------~~~~~~~a 217 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPAGKIMI--DA--N--------NAYNLNLT 217 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHCTTCCEEE--EC--T--------TCCCHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhCCCCeEEE--EC--C--------CCCCHHHH
Confidence 55667777888999998864 222221111 11 11223332 22223333 21 1 12455444
Q ss_pred HHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-----CCeeEEEcCCCCHHHHHHHhhcCCceEEeeec
Q 025707 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-----GKIKYIGLSEASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 112 ~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-----G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
.+- ++.|. ..++.++..|-. +.++.+.++++. -.|.-.+--.++++.++++++....+++|+..
T Consensus 218 i~~----~~~l~--~~~i~~iE~P~~-----~d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik~ 286 (392)
T 3p3b_A 218 KEV----LAALS--DVNLYWLEEAFH-----EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRGRVDVLQYDI 286 (392)
T ss_dssp HHH----HHHTT--TSCEEEEECSSS-----CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTTSCCEECCBT
T ss_pred HHH----HHHHH--hcCCCEEecCCc-----ccHHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 333 33432 235556666643 235566666665 34433332255667888888888899999987
Q ss_pred Cccccch-hhhHHHHHHHhCCcEEecccCcc
Q 025707 187 SLWARDI-ENEIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 187 n~~~~~~-~~~~~~~~~~~gi~v~a~spl~~ 216 (249)
+-. .-. ..++.+.|+++|+.++.. .+..
T Consensus 287 ~~~-Git~~~~i~~~A~~~gi~~~~h-~~es 315 (392)
T 3p3b_A 287 IWP-GFTHWMELGEKLDAHGLRSAPH-CYGN 315 (392)
T ss_dssp TTB-CHHHHHHHHHHHHHTTCEECCB-CCSC
T ss_pred ccc-CHHHHHHHHHHHHHcCCEEEec-CCCC
Confidence 775 322 278999999999999886 4433
|
| >1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A* | Back alignment and structure |
|---|
Probab=85.91 E-value=13 Score=32.58 Aligned_cols=106 Identities=14% Similarity=0.015 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc------CCeeEEEcCCCCHHHHHHHhhcCCc
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE------GKIKYIGLSEASPDTIRRAHAVHPI 179 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~------G~ir~iGvs~~~~~~l~~~~~~~~~ 179 (249)
++++...+-+ +.|+.++. .+++ ++..|-......+-++.+.+|.++ +.=-..|=+.++...+.++++...+
T Consensus 249 ~~~~~A~~~~-~~L~~~~~-~~~l-~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~ 325 (413)
T 1kko_A 249 MDPVRCAEYI-ASLEKEAQ-GLPL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSC 325 (413)
T ss_dssp TCHHHHHHHH-HHTGGGGT-TSCE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCC
T ss_pred CCHHHHHHHH-HHHHhccC-Ccce-EEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCC
Confidence 4555443322 23444443 2565 777775433335667788888775 3333446677889999999988889
Q ss_pred eEEeeecCccccc-hhhhHHHHHHHhCCcEEecccC
Q 025707 180 TAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 180 ~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~spl 214 (249)
+++|+..+-+-.- ...++.+.|+++|+.++..+..
T Consensus 326 d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 326 HMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTC 361 (413)
T ss_dssp SEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCT
T ss_pred CEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 9999987664331 1278999999999999998775
|
| >3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana} | Back alignment and structure |
|---|
Probab=85.49 E-value=10 Score=32.72 Aligned_cols=153 Identities=14% Similarity=0.122 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCC-cC-CCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCC-HHHHHHHHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADK-YG-PYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT-PEYVRSCCEA 117 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~-Yg-~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s-~~~i~~~~~~ 117 (249)
.++..+..+.+.+.|++.|..--. +| +-......-+++++.-.+++-|.-.... .++ ++...+ +-+
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~d~~~A~~-~~~ 215 (374)
T 3sjn_A 147 PEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLAS----------KWHTCGHSAM-MAK 215 (374)
T ss_dssp GGGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTCSHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCHHHHHH-HHH
Confidence 367778888899999999986432 21 1112223334555422234444444321 234 444332 334
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~ 195 (249)
.|+.++++++ ..|-... .++.+.+++++-.|. ..|=+-++...++++++...++++|+..+-.-. ....
T Consensus 216 ~l~~~~i~~i-----EqP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~ 286 (374)
T 3sjn_A 216 RLEEFNLNWI-----EEPVLAD----SLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMK 286 (374)
T ss_dssp HSGGGCCSEE-----ECSSCTT----CHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHH
T ss_pred HhhhcCceEE-----ECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHH
Confidence 5566665544 4553322 356677787765444 334456778888988888788999998766532 1127
Q ss_pred hHHHHHHHhCCcEEeccc
Q 025707 196 EIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~sp 213 (249)
++.+.|+++|+.+...+.
T Consensus 287 ~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 287 KIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp HHHHHHHHHTCEECCBCC
T ss_pred HHHHHHHHcCCEEEecCC
Confidence 899999999999998776
|
| >3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=85.14 E-value=5.2 Score=34.83 Aligned_cols=151 Identities=11% Similarity=0.121 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHH
Q 025707 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (249)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (249)
++..+..+.+.+.|++.|..--... ...+...-+++++.-.+++-|.-.... .++++...+ +-+.|+.
T Consensus 157 e~~~~~a~~~~~~G~~~iKlK~g~~-~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~~-~~~~L~~ 224 (392)
T 3ddm_A 157 ENPEDVVARKAAEGYRAFKLKVGFD-DARDVRNALHVRELLGAATPLMADANQ----------GWDLPRARQ-MAQRLGP 224 (392)
T ss_dssp SSHHHHHHHHHHHTCCCEEEECSSC-HHHHHHHHHHHHHHHCSSSCEEEECTT----------CCCHHHHHH-HHHHHGG
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC-HHHHHHHHHHHHHhcCCCceEEEeCCC----------CCCHHHHHH-HHHHHHH
Confidence 5566777788889999997643321 122233334555421223323333211 244544333 3346667
Q ss_pred cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhHHH
Q 025707 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVP 199 (249)
Q Consensus 122 Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~ 199 (249)
+++++|+ .|-...+ .++.+.+++++-.|. ..|=+-++...++++++...++++|+..+-.-. ....++.+
T Consensus 225 ~~i~~iE-----eP~~~~d---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~ 296 (392)
T 3ddm_A 225 AQLDWLE-----EPLRADR---PAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVAR 296 (392)
T ss_dssp GCCSEEE-----CCSCTTS---CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHH
T ss_pred hCCCEEE-----CCCCccc---hHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHH
Confidence 7765553 4433222 156677777654443 445567889999999888889999997655422 11278999
Q ss_pred HHHHhCCcEEecc
Q 025707 200 LCRELGIGIVPYC 212 (249)
Q Consensus 200 ~~~~~gi~v~a~s 212 (249)
.|+++|+.++...
T Consensus 297 ~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 297 AVVAAGLRYCPHY 309 (392)
T ss_dssp HHHHTTCEECCEE
T ss_pred HHHHcCCEEEecC
Confidence 9999999997544
|
| >3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A* | Back alignment and structure |
|---|
Probab=84.82 E-value=14 Score=32.67 Aligned_cols=154 Identities=12% Similarity=0.155 Sum_probs=93.9
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
.+.++..+..+.+++. |++.|=.--...+...+...-+++++.- +++-|.--.. ..++++.. -+
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~-~d~~L~vDaN----------~~w~~~~A----i~ 256 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVFAPEEEMAAVEALRAAF-PDHPLRLDPN----------AAWTPQTS----VK 256 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHC-TTSCEEEECT----------TCSCHHHH----HH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHhC-CCCcEEEECC----------CCCCHHHH----HH
Confidence 4778888888888875 9999865432211112222334555522 3333332211 12344333 23
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~ 195 (249)
.+++|. ++ +.++..|-. -++.+.++++.-.| -..|-+.++...+.++++...++++|+..+-+-. ....
T Consensus 257 ~~~~L~-~~--l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~GGitea~ 327 (445)
T 3vdg_A 257 VAAGLE-GV--LEYLEDPTP------GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRSR 327 (445)
T ss_dssp HHHHTT-TT--CSEEECCSS------SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHHTSHHHHH
T ss_pred HHHHHh-hH--HHeeeCCCC------CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCcceeCCHHHHH
Confidence 445664 34 677777732 25667777765333 3556677888889888888888999997554332 1127
Q ss_pred hHHHHHHHhCCcEEecccCcc
Q 025707 196 EIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl~~ 216 (249)
.+.+.|+++|+.+...+....
T Consensus 328 kia~lA~~~gv~v~~h~~~e~ 348 (445)
T 3vdg_A 328 LLAGICDTFGLGLSMHSNSHL 348 (445)
T ss_dssp HHHHHHHHHTCEEEECCCSCC
T ss_pred HHHHHHHHcCCEEEEeCCcch
Confidence 899999999999998877543
|
| >3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199} | Back alignment and structure |
|---|
Probab=84.62 E-value=9.5 Score=33.13 Aligned_cols=157 Identities=10% Similarity=-0.022 Sum_probs=94.8
Q ss_pred CHHHHHHHHHHHHHc---CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSK---GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~---Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (249)
+.++..+.++.+++. |++.|-.--...+-..+...-+++++.-.+++-|.-.... .++++...+ +-
T Consensus 171 ~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~ 239 (390)
T 3ugv_A 171 PAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGRDTALMVDFNQ----------GLDMAEAMH-RT 239 (390)
T ss_dssp HHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHH-HH
Confidence 567888888899999 9999875432211112333334555422234444433321 244544332 23
Q ss_pred HHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chh
Q 025707 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (249)
Q Consensus 117 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~ 194 (249)
+.|+.+++ .++..|-...+ ++.+.++++.-.|. ..|=+.++...+.++++...++++|+..+-.-. ...
T Consensus 240 ~~l~~~~i-----~~iEqP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~ 310 (390)
T 3ugv_A 240 RQIDDLGL-----EWIEEPVVYDN----FDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGW 310 (390)
T ss_dssp HHHTTSCC-----SEEECCSCTTC----HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHH
T ss_pred HHHHhhCC-----CEEECCCCccc----HHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 34455554 44455544333 55667777654443 445677889999999988889999997655422 112
Q ss_pred hhHHHHHHHhCCcEEecccCcc
Q 025707 195 NEIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 195 ~~~~~~~~~~gi~v~a~spl~~ 216 (249)
.++.+.|+++|+.+...+.+..
T Consensus 311 ~~i~~~A~~~gi~~~~h~~~~a 332 (390)
T 3ugv_A 311 MRAAGVAGAWGIPMSTHLYPEV 332 (390)
T ss_dssp HHHHHHHHHHTCCBCCBSCHHH
T ss_pred HHHHHHHHHcCCEEeecCHHHH
Confidence 6899999999999987766533
|
| >3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A | Back alignment and structure |
|---|
Probab=84.59 E-value=19 Score=31.07 Aligned_cols=157 Identities=10% Similarity=0.007 Sum_probs=90.7
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+-...+++ .|++.|-.--...+-..+...-+++++.-.+++-|.-.... .++++...+ +-+.
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~~-~~~~ 216 (382)
T 3dgb_A 148 DTAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKALGDSASVRVDVNQ----------AWDEAVALR-ACRI 216 (382)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHHGGGSEEEEECTT----------CBCHHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHcCCCCeEEEeCCC----------CCCHHHHHH-HHHH
Confidence 34555555566666 69999975432211012223334454421233444433221 234444332 3345
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+++.+ +..|-... -++.+.++++.-.| -..|=+.++...+.++++...++++|+..+-.-. ....+
T Consensus 217 l~~~~i~~-----iEqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 287 (382)
T 3dgb_A 217 LGGNGIDL-----IEQPISRN----NRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLR 287 (382)
T ss_dssp HHTTTCCC-----EECCBCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HhhcCcCe-----eeCCCCcc----CHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHH
Confidence 56666544 44553322 25666777765434 3456677889999999988888999997655422 11277
Q ss_pred HHHHHHHhCCcEEecccCcc
Q 025707 197 IVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~ 216 (249)
+.+.|+++|+.++..+.+..
T Consensus 288 i~~~A~~~gi~~~~~~~~es 307 (382)
T 3dgb_A 288 TAAIAEAAGIGLYGGTMLEG 307 (382)
T ss_dssp HHHHHHHHTCEEEECCSCCC
T ss_pred HHHHHHHcCCeEeecCCCcc
Confidence 89999999999987776644
|
| >4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii} | Back alignment and structure |
|---|
Probab=84.20 E-value=20 Score=31.14 Aligned_cols=154 Identities=10% Similarity=0.015 Sum_probs=93.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC--cCC--C--------chHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCC
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK--YGP--Y--------TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~--Yg~--g--------~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s 107 (249)
+.++..+..+.+++.|++.|..-.. |.. | ......-+++++.-.+++-|.-.... .++
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~----------~~~ 220 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHG----------QFT 220 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCC----------CcC
Confidence 5788888888999999999986432 110 0 01122233444322234444444321 244
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEE-EcCCCCHHHHHHHhhcCCceEEeeec
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
.+...+ +-+.|+.++++++ ..|-... .++.+.++++.-.|.-. |=+-++.+.++++++...++++|+..
T Consensus 221 ~~~A~~-~~~~l~~~~i~~i-----EeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 221 VSGAKR-LARRLEAYDPLWF-----EEPIPPE----KPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp HHHHHH-HHHHHGGGCCSEE-----ECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred HHHHHH-HHHHHhhcCCcEE-----ECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 544433 3345677776544 4453332 35667777776555433 44567788899998888899999987
Q ss_pred Ccccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 187 SLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 187 n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
+-.-. ....++.+.|+++|+.+...+.
T Consensus 291 ~~~GGit~~~~ia~~A~~~gi~~~~h~~ 318 (404)
T 4e5t_A 291 GRVGGLLEAKKIAAMAECHSAQIAPHLY 318 (404)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCEECCCCS
T ss_pred cccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 66532 1227899999999999976653
|
| >2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=83.99 E-value=20 Score=30.91 Aligned_cols=149 Identities=15% Similarity=0.031 Sum_probs=91.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+....+.+.|++.|..--.-++-.....+-+++++.-.+++-|.-.... .++.+...+-++. |
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~~~~l~vDan~----------~~~~~~a~~~~~~-l 213 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTCVPAGSKVMIDPNE----------AWTSKEALTKLVA-I 213 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTTSCTTCEEEEECTT----------CBCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHhhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 5777888888899999999985321111012222334555422345555544321 2456655555544 7
Q ss_pred HH--cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcC-CeeEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhh
Q 025707 120 RR--LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENE 196 (249)
Q Consensus 120 ~~--Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~ 196 (249)
+. ++++ ++..|-.. +.++.+.++++.- .|--++--+.+.+.++++++....+++|+. .=+. ...+
T Consensus 214 ~~~g~~i~-----~iEqP~~~----~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik-GGit--~a~~ 281 (389)
T 2oz8_A 214 REAGHDLL-----WVEDPILR----HDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH-GQVT--DVMR 281 (389)
T ss_dssp HHTTCCCS-----EEESCBCT----TCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC-SCHH--HHHH
T ss_pred HhcCCCce-----EEeCCCCC----cCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC-cCHH--HHHH
Confidence 77 5543 44555332 2466777888764 555444333388899999988889999997 1111 1278
Q ss_pred HHHHHHHhCCcEEec
Q 025707 197 IVPLCRELGIGIVPY 211 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~ 211 (249)
+.+.|+++|+.++..
T Consensus 282 i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 282 IGWLAAELGIPISIG 296 (389)
T ss_dssp HHHHHHHHTCCEEEC
T ss_pred HHHHHHHcCCeEeec
Confidence 999999999999988
|
| >3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A | Back alignment and structure |
|---|
Probab=83.88 E-value=16 Score=32.29 Aligned_cols=154 Identities=17% Similarity=0.175 Sum_probs=93.9
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
.+.++..+..+.+++. |++.|=.--...+...+...-+++++.- +++-|.--... .++++.. -+
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~-pd~~L~vDaN~----------~w~~~~A----i~ 251 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAF-PGLPLRLDPNA----------AWTVETS----IR 251 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHS-TTCCEEEECTT----------CSCHHHH----HH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC-CCCcEeccCCC----------CCCHHHH----HH
Confidence 4778888888888874 9999865432211112222234555422 33333322111 2344333 23
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~ 195 (249)
.+++|. ++ +.++..|-. -++.+.++++.-.| -..|-|.++...+.++++...++++|+..+-+-. ....
T Consensus 252 ~~~~L~-~~--l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGitea~ 322 (441)
T 3vc5_A 252 VGRALD-GV--LEYLEDPTP------GIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRSA 322 (441)
T ss_dssp HHHHTT-TT--CSEEECCSS------SHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHHHHH
T ss_pred HHHHHH-HH--HHHhhccCC------CHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHHHHH
Confidence 455664 34 677777732 25677777765333 3556777888889888888888999997554321 1127
Q ss_pred hHHHHHHHhCCcEEecccCcc
Q 025707 196 EIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl~~ 216 (249)
.+...|+++|+.+...+....
T Consensus 323 kia~lA~~~gv~v~~h~~~e~ 343 (441)
T 3vc5_A 323 HIATLCATFGIELSMHSNSHL 343 (441)
T ss_dssp HHHHHHHHTTCEEEECCCSCC
T ss_pred HHHHHHHHcCCEEEecCCccc
Confidence 899999999999998877543
|
| >1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A | Back alignment and structure |
|---|
Probab=82.35 E-value=23 Score=30.33 Aligned_cols=156 Identities=8% Similarity=0.040 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHH-cCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHH
Q 025707 42 EDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120 (249)
Q Consensus 42 ~~~~~~l~~A~~-~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~ 120 (249)
++..+-...+++ .|++.|-.--...+-..+...-+++++.-.+++-|.-.... .++++...+ +-+.|+
T Consensus 144 ~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~~-~~~~l~ 212 (370)
T 1chr_A 144 KRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQ----------AWDEQVASV-YIPELE 212 (370)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECSSSCSHHHHHHHHHHHHHSSTTCCEEEECTT----------CCCTTHHHH-HTHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEEECCC----------CCCHHHHHH-HHHHHH
Confidence 333333445555 89999875432211123333445666522233333333221 133333322 233445
Q ss_pred HcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhHH
Q 025707 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIV 198 (249)
Q Consensus 121 ~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~ 198 (249)
.++ +.++..|-...+ ++.+.+++++-.|. ..|=+-++...+.++++...++++|+..+-.-. ....++.
T Consensus 213 ~~~-----i~~iEqP~~~~~----~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~ 283 (370)
T 1chr_A 213 ALG-----VELIEQPVGREN----TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIA 283 (370)
T ss_dssp TTT-----EEEEECCSCTTC----HHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHH
T ss_pred hcC-----CCEEECCCCccc----HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHH
Confidence 554 455666644333 56667777654443 345567889999999988889999998766532 1227899
Q ss_pred HHHHHhCCcEEecccCccc
Q 025707 199 PLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 199 ~~~~~~gi~v~a~spl~~G 217 (249)
+.|+++|+.++..+.+..|
T Consensus 284 ~~A~~~g~~~~~~~~~es~ 302 (370)
T 1chr_A 284 AVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHTCEEEECCSCCTT
T ss_pred HHHHHcCCeEEecCCCccH
Confidence 9999999999977666543
|
| >3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A* | Back alignment and structure |
|---|
Probab=82.08 E-value=23 Score=31.30 Aligned_cols=154 Identities=12% Similarity=0.055 Sum_probs=92.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC-cC------------------------------CC---c------hHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK-YG------------------------------PY---T------NEILLGKALK 79 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~-Yg------------------------------~g---~------se~~lg~~l~ 79 (249)
+.++..+.++.+++.|++.|=.--. ++ .+ . .....-++++
T Consensus 155 ~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR 234 (440)
T 3t6c_A 155 DEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKSIPRLFDHLR 234 (440)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHH
Confidence 6788888889999999999864321 11 00 0 1112233444
Q ss_pred cCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-
Q 025707 80 ELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK- 158 (249)
Q Consensus 80 ~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir- 158 (249)
+.-.+++-|.-.... .++++...+- -+.|+.+++++ +..|-.. +.++.+.+++++-.|.
T Consensus 235 ~a~G~d~~L~vDaN~----------~~~~~~A~~~-~~~L~~~~i~~-----iEeP~~~----~d~~~~~~l~~~~~iPI 294 (440)
T 3t6c_A 235 NKLGFSVELLHDAHE----------RITPINAIHM-AKALEPYQLFF-----LEDPVAP----ENTEWLKMLRQQSSTPI 294 (440)
T ss_dssp HHHCSSSEEEEECTT----------CSCHHHHHHH-HHHTGGGCCSE-----EECSSCG----GGGGGHHHHHHHCCSCE
T ss_pred HhcCCCCeEEEECCC----------CCCHHHHHHH-HHHhhhcCCCE-----EECCCCh----hhHHHHHHHHhhcCCCE
Confidence 422234445444321 2444443322 23455565544 4444332 2356677777654443
Q ss_pred EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 159 YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 159 ~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
..|=+-++...+.++++...++++|+..+-+-. ....++.+.|+++|+.++..+.
T Consensus 295 a~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 350 (440)
T 3t6c_A 295 AMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSP 350 (440)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCS
T ss_pred EeCcccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHHHHcCCEEEeccC
Confidence 445577889999999988889999998765432 1127899999999999987666
|
| >3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A | Back alignment and structure |
|---|
Probab=81.99 E-value=26 Score=30.80 Aligned_cols=154 Identities=7% Similarity=-0.003 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC------cCCCch------HHHHHHHHHcCCCCCeEEEecccccccCCcccccCCC
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK------YGPYTN------EILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~------Yg~g~s------e~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s 107 (249)
+.++..+..+.+++.|++.|..-.. +|.... ....-+++++.-.+++-|.-.... .++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~----------~~t 215 (433)
T 3rcy_A 146 SADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHG----------QFT 215 (433)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCC
Confidence 6788889999999999999986321 221111 112233444422234444444321 244
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeec
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
++...+ +-+.|+.+++++ +..|-... .++.+.++++.-.|. ..|=+-++...++++++...++++|+..
T Consensus 216 ~~~A~~-~~~~Le~~~i~~-----iEeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~ 285 (433)
T 3rcy_A 216 TAGAIR-LGQAIEPYSPLW-----YEEPVPPD----NVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPAL 285 (433)
T ss_dssp HHHHHH-HHHHHGGGCCSE-----EECCSCTT----CHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred HHHHHH-HHHHhhhcCCCE-----EECCCChh----hHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 544433 334567776654 44554332 356677777765454 3455678899999999888899999976
Q ss_pred Ccccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 187 SLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 187 n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
+-.-. ....++.+.|+++|+.+...++
T Consensus 286 ~~~GGit~~~kia~lA~~~gv~~~~h~~ 313 (433)
T 3rcy_A 286 GRAGGIWEMKKVAAMAEVYNAQMAPHLY 313 (433)
T ss_dssp HHHTHHHHHHHHHHHHHTTTCEECCCCS
T ss_pred hhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 54422 1127799999999999987764
|
| >1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A | Back alignment and structure |
|---|
Probab=81.82 E-value=4.5 Score=31.93 Aligned_cols=64 Identities=14% Similarity=0.184 Sum_probs=43.1
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCCHHHHHHHhhcCCceEEeee
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLE 185 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~ 185 (249)
..+|.|++-+++..........+.+-+....+ ...+..+||- |.+++.+.+..+..+++++|+.
T Consensus 19 ~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~--~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 19 VESGADAVGFVFYPKSKRYISPEDARRISVEL--PPFVFRVGVFVNEEPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp HHHTCSEEEEECCTTCTTBCCHHHHHHHHHHS--CSSSEEEEEESSCCHHHHHHHHHHHTCSEEEEC
T ss_pred HHcCCCEEEEEecCCCCCcCCHHHHHHHHHhC--CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC
Confidence 36899999998543223334444443332222 2468889984 6788888888888889999995
|
| >3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A | Back alignment and structure |
|---|
Probab=81.81 E-value=25 Score=30.44 Aligned_cols=151 Identities=9% Similarity=0.016 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHcCCCeEeC-CCCc--CCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCC-CHHHHHHHHHHH
Q 025707 43 DGISIIKHAFSKGITFFDT-ADKY--GPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEAS 118 (249)
Q Consensus 43 ~~~~~l~~A~~~Gi~~~Dt-a~~Y--g~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~-s~~~i~~~~~~s 118 (249)
+..+.++.+.+.|++.|-. --.. .+.......-+++++.-.+++-|.-... ..+ +.+...+-+ +.
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~G~d~~l~vDaN----------~~~~~~~~A~~~~-~~ 228 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGILGHDTDMMVDYL----------YRFTDWYEVARLL-NS 228 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHHCSSSEEEEECT----------TCCCCHHHHHHHH-HH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHhCCCCeEEEeCC----------CCCCCHHHHHHHH-HH
Confidence 5556788888999999976 2221 1111222333455542223333333321 124 454443333 34
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
|+.+++++ +..|-...+ ++.+.++++.-.|. ..|=+-++...++++++...++++|+..+-.-. ....+
T Consensus 229 L~~~~i~~-----iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ 299 (394)
T 3mkc_A 229 IEDLELYF-----AEATLQHDD----LSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRR 299 (394)
T ss_dssp TGGGCCSE-----EESCSCTTC----HHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred hhhcCCeE-----EECCCCchh----HHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHH
Confidence 56666544 455543333 56677777765554 334456778899999988889999998766432 12277
Q ss_pred HHHHHHHhCCcEEeccc
Q 025707 197 IVPLCRELGIGIVPYCP 213 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~sp 213 (249)
+.+.|+++|+.++..+.
T Consensus 300 ia~~A~~~gi~~~~h~~ 316 (394)
T 3mkc_A 300 ITEMATANNVQVMPHNW 316 (394)
T ss_dssp HHHHHHHTTCEECCCCC
T ss_pred HHHHHHHcCCEEeecCC
Confidence 99999999999987764
|
| >3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A* | Back alignment and structure |
|---|
Probab=81.61 E-value=20 Score=31.32 Aligned_cols=155 Identities=9% Similarity=-0.001 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC-------cCC---------------C----------chHHHHHHHHHcCCCCCeE
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK-------YGP---------------Y----------TNEILLGKALKELPRENIQ 87 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~-------Yg~---------------g----------~se~~lg~~l~~~~r~~~~ 87 (249)
+.++..+.++.+++.|++.|-.--. ||. + .....+-+++++.-.+++-
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G~d~~ 222 (418)
T 3r4e_A 143 DIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYGFDHH 222 (418)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCe
Confidence 5788888999999999999874211 221 0 0112223444442123444
Q ss_pred EEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeE-EEcCCCC
Q 025707 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEAS 166 (249)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~ 166 (249)
|.-.... .++.+...+ +-+.|+.+++++| ..|-... .++.+.+++++-.|.- .|=+-++
T Consensus 223 l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~ 282 (418)
T 3r4e_A 223 LLHDGHH----------RYTPQEAAN-LGKMLEPYQLFWL-----EDCTPAE----NQEAFRLVRQHTVTPLAVGEIFNT 282 (418)
T ss_dssp EEEECTT----------CSCHHHHHH-HHHHHGGGCCSEE-----ESCSCCS----SGGGGHHHHHHCCSCEEECTTCCS
T ss_pred EEEeCCC----------CCCHHHHHH-HHHHHHhhCCCEE-----ECCCCcc----CHHHHHHHHhcCCCCEEEcCCcCC
Confidence 4433321 245554433 3345667776554 4553322 2455677777655543 3445678
Q ss_pred HHHHHHHhhcCCceEEeeecCcccc-chhhhHHHHHHHhCCcEEecccC
Q 025707 167 PDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~spl 214 (249)
.+.++++++...++++|+..+-+-. ....++.+.|+++|+.++..+++
T Consensus 283 ~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 283 IWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 8888999888889999998766432 12278999999999999988875
|
| >2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A | Back alignment and structure |
|---|
Probab=81.40 E-value=23 Score=29.81 Aligned_cols=158 Identities=12% Similarity=-0.014 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHH
Q 025707 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120 (249)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~ 120 (249)
.++..+.++.+++.|++.|-.--.-.+-..+...-+++++.-.+++-|.--. + ..++++...+-++ .|+
T Consensus 117 ~e~~~~~a~~~~~~G~~~~KiKvg~~~~~~d~~~v~avr~~~g~~~~L~vDa--N--------~~~~~~~A~~~~~-~l~ 185 (332)
T 2ozt_A 117 GQAALEQWQQSWQRGQTTFKWKVGVMSPEEEQAILKALLAALPPGAKLRLDA--N--------GSWDRATANRWFA-WLD 185 (332)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHHSCTTCEEEEEC--T--------TCCCHHHHHHHHH-HHH
T ss_pred hHHHHHHHHHHHHcCCcEEEEEeCCCChHHHHHHHHHHHHHcCCCCEEEEcc--c--------CCCCHHHHHHHHH-HHH
Confidence 4556677788889999988653221100112222344444212233332211 1 1245665554443 355
Q ss_pred HcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCC-eeEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHH
Q 025707 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVP 199 (249)
Q Consensus 121 ~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~ 199 (249)
.++ ..++.++..|-...+ ++.+.++.+.-. =-..|=|.++...+.++++....+++|+..+..-. ..++.+
T Consensus 186 ~~~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~ik~~~~GG--i~~i~~ 257 (332)
T 2ozt_A 186 RHG--NGKIEYVEQPLPPDQ----WQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPGFFVIKTALFGD--PDSLSL 257 (332)
T ss_dssp HHC--CTTEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHSC--HHHHHH
T ss_pred hhc--cCCcceeECCCCCCC----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEChhhhCC--HHHHHH
Confidence 552 126788888865444 455566665433 33556677889999999887777888887554422 157899
Q ss_pred HHHHh--CCcEEecccCccc
Q 025707 200 LCREL--GIGIVPYCPLGRG 217 (249)
Q Consensus 200 ~~~~~--gi~v~a~spl~~G 217 (249)
.|+++ |+.++..+.+..+
T Consensus 258 ~A~~~~~gi~~~~~~~~es~ 277 (332)
T 2ozt_A 258 LLRRGLEPQRLVFSSALEGA 277 (332)
T ss_dssp HHHTTCCGGGEEEBCCSCCH
T ss_pred HHHHhCCCCcEEEeCCcchH
Confidence 99999 9999988776544
|
| >4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A | Back alignment and structure |
|---|
Probab=81.24 E-value=10 Score=33.73 Aligned_cols=157 Identities=11% Similarity=0.066 Sum_probs=90.6
Q ss_pred CHHHHHHHHHHHH-HcCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAF-SKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 40 ~~~~~~~~l~~A~-~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
+.++..+....++ +.|++.|=.--...++..+...-+++++ .+.-++.| - .+. .++++... +
T Consensus 202 ~~~~~~~~~~~~~~~~Gf~~~KlKvG~~~~~~di~~v~avrea~pd~~L~v--D--aN~--------~wt~~~Ai----~ 265 (464)
T 4g8t_A 202 TPESVVRLAEAAYEKYGFNDFKLKGGVLDGFEEAEAVTALAKRFPDARITL--D--PNG--------AWSLDEAV----K 265 (464)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTTCCEEE--E--CTT--------CBCHHHHH----H
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHhhCCCceEEE--E--CCC--------ccCHHHHH----H
Confidence 4555556666666 4599987543322222223333345554 44223322 1 111 23444332 3
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENE 196 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~ 196 (249)
.++.|. ++ +.++..|-...+.....+.+.++++.-.| -+.|-+.++...+.++++...++++|.....---....+
T Consensus 266 ~~~~le-~~--l~wiEeP~~~~d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~~d~~~GGit~~~k 342 (464)
T 4g8t_A 266 IGKQLK-GV--LAYAEDPCGAEQGYSGREIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPLADPHFWTMQGSIR 342 (464)
T ss_dssp HHHHTT-TT--CSCEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHHhh-hc--cceeecCcCcccccchHHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEeccccccchHHHHH
Confidence 455664 33 44566665444443445666666655333 467888999999999998888888888743211112278
Q ss_pred HHHHHHHhCCcEEecccCc
Q 025707 197 IVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~ 215 (249)
+.+.|+++|+.+...+...
T Consensus 343 ia~lA~~~gi~v~~h~~~~ 361 (464)
T 4g8t_A 343 VAQMCHEWGLTWGSHSNNH 361 (464)
T ss_dssp HHHHHHHHTCCCBCCCCSC
T ss_pred HHHHHHHcCCEEEEcCCcc
Confidence 9999999999998876543
|
| >4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified} | Back alignment and structure |
|---|
Probab=81.01 E-value=28 Score=30.41 Aligned_cols=154 Identities=10% Similarity=0.009 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC--cCC--C--c------hHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCC
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADK--YGP--Y--T------NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~--Yg~--g--~------se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s 107 (249)
+.++..+..+.+++.|++.|-.-.. |.. | . .....-+++++.-.+++-|.-.... .++
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~----------~~~ 213 (412)
T 4e4u_A 144 DPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHG----------QMV 213 (412)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCC
Confidence 6788888888999999999987432 110 0 0 1112223444422234444444321 244
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeec
Q 025707 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEW 186 (249)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (249)
.+...+ +-+.|+.++++++ ..|-... .++.+.++++.-.|. ..|=+-++...++++++...++++|+..
T Consensus 214 ~~~A~~-~~~~L~~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 283 (412)
T 4e4u_A 214 PSSAIR-LAKRLEKYDPLWF-----EEPVPPG----QEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNV 283 (412)
T ss_dssp HHHHHH-HHHHHGGGCCSEE-----ECCSCSS----CHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred HHHHHH-HHHHhhhcCCcEE-----ECCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCc
Confidence 544433 3345667776544 4553333 356777888765554 3344567788899999888899999987
Q ss_pred Ccccc-chhhhHHHHHHHhCCcEEeccc
Q 025707 187 SLWAR-DIENEIVPLCRELGIGIVPYCP 213 (249)
Q Consensus 187 n~~~~-~~~~~~~~~~~~~gi~v~a~sp 213 (249)
+-.-. ....++.+.|+++|+.+.....
T Consensus 284 ~~~GGit~~~kia~~A~~~gi~v~~h~~ 311 (412)
T 4e4u_A 284 ARVGGLLEAKKIATLAEVHYAQIAPHLY 311 (412)
T ss_dssp TTTTSHHHHHHHHHHHHHTTCEECCCCC
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 66432 1227799999999999876643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 249 | ||||
| d1pyfa_ | 311 | c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillu | 1e-48 | |
| d1lqaa_ | 346 | c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: | 9e-48 | |
| d3eaua1 | 326 | c.1.7.1 (A:36-361) Voltage-dependent K+ channel be | 6e-42 | |
| d1pz1a_ | 333 | c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillu | 2e-36 | |
| d1s1pa_ | 315 | c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (ak | 4e-36 | |
| d1afsa_ | 319 | c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase | 2e-35 | |
| d1us0a_ | 314 | c.1.7.1 (A:) Aldose reductase (aldehyde reductase) | 5e-34 | |
| d1qwka_ | 312 | c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematod | 6e-33 | |
| d1hqta_ | 324 | c.1.7.1 (A:) Aldose reductase (aldehyde reductase) | 6e-33 | |
| d1mi3a_ | 319 | c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenu | 4e-32 | |
| d1vp5a_ | 284 | c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase | 6e-31 | |
| d1mzra_ | 274 | c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase | 5e-29 | |
| d1frba_ | 315 | c.1.7.1 (A:) FR-1 (fibroblast growth factor-induce | 1e-28 | |
| d1ur3m_ | 298 | c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Esc | 4e-28 | |
| d1gvea_ | 324 | c.1.7.1 (A:) Aflatoxin aldehyde reductase (akr7a1) | 1e-25 | |
| d1hw6a_ | 262 | c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase | 1e-23 |
| >d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus subtilis [TaxId: 1423]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase IolS species: Bacillus subtilis [TaxId: 1423]
Score = 160 bits (405), Expect = 1e-48
Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 2/213 (0%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSP-LSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
+ KLG L+V +G G ++ G P L+EE G +++ A G+T DTA YG
Sbjct: 2 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGR 61
Query: 70 NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
+E L+G+ L+E RE++ +ATK + G V +P++++ + SL+RL+ +YIDL
Sbjct: 62 SEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDN-SPDFLKKSVDESLKRLNTDYIDL 120
Query: 130 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLW 189
+Y H D P +E + + ++ + GKI+ IG+S S + ++ A+ + +Q E++L
Sbjct: 121 FYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLL 180
Query: 190 ARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
R+ E P +E I +PY PL G GK
Sbjct: 181 NREAEKTFFPYTKEHNISFIPYFPLVSGLLAGK 213
|
| >d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Tas protein species: Escherichia coli [TaxId: 562]
Score = 159 bits (402), Expect = 9e-48
Identities = 56/272 (20%), Positives = 93/272 (34%), Gaps = 38/272 (13%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
++ LEVS LG G M+ SE D + + +A ++GI D A+ Y
Sbjct: 4 HRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRP 59
Query: 72 ILLGKALKELPRE-----------NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
G + + + +R SL+
Sbjct: 60 ETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLK 119
Query: 121 RLDVEYIDLYYQHRVDTSVPI-----------------EETIGEMKKLVEEGKIKYIGLS 163
RL +Y+DLY H +T+ + + GKI+YIG+S
Sbjct: 120 RLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVS 179
Query: 164 EASPDTIRRA------HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+ + R H + I +Q +SL R E + + + G+ ++ Y LG G
Sbjct: 180 NETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFG 239
Query: 218 FFGGKAVVESVPLDSFLVCFSSISVSFCFITQ 249
GK + + P + FS + TQ
Sbjct: 240 TLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQ 271
|
| >d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 326 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Voltage-dependent K+ channel beta subunit species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 143 bits (361), Expect = 6e-42
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 10/217 (4%)
Query: 13 KLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEI 72
LG GL VS LG G G +++E ++ A+ GI FDTA+ Y E+
Sbjct: 6 NLGKSGLRVSCLGLGTWVTFG---GQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEV 62
Query: 73 LLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQ 132
+LG +K+ + G + +++ +ASL RL +EY+D+ +
Sbjct: 63 VLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFA 122
Query: 133 HRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR------AHAVHPITAVQLEW 186
+R D + P+EET+ M ++ +G Y G S S I + P Q E+
Sbjct: 123 NRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEY 182
Query: 187 SLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
++ R+ +E ++ L ++G+G + + PL G GK
Sbjct: 183 HMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 219
|
| >d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus subtilis [TaxId: 1423]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase YhdN species: Bacillus subtilis [TaxId: 1423]
Score = 129 bits (323), Expect = 2e-36
Identities = 66/210 (31%), Positives = 106/210 (50%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
+ G+E S++G G ++ G E+ I I+ A +GIT DTA YG +E
Sbjct: 4 TSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSE 63
Query: 72 ILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYY 131
++GKA+KE + + + ++ + + E SL+RL +YIDLY
Sbjct: 64 EIVGKAIKEYMKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQ 123
Query: 132 QHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR 191
H D VPIEET MK+L + GKI+ IG+S S + + AV P+ +Q ++L+ R
Sbjct: 124 VHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFER 183
Query: 192 DIENEIVPLCRELGIGIVPYCPLGRGFFGG 221
++E ++P ++ I + Y L RG G
Sbjct: 184 EMEESVLPYAKDNKITTLLYGSLCRGLLTG 213
|
| >d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Prostaglandin d2 11-ketoreductase (akr1c3) species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (321), Expect = 4e-36
Identities = 45/234 (19%), Positives = 75/234 (32%), Gaps = 33/234 (14%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN 70
VKL G + LG+G + + + + K A G D+A Y N
Sbjct: 2 CVKLND-GHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---N 52
Query: 71 EILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLY 130
E +G A++ + PE VR E SL++ ++Y+DLY
Sbjct: 53 EEQVGLAIRSKIADGSVKREDI---FYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLY 109
Query: 131 YQHRVDTSVP-------------------IEETIGEMKKLVEEGKIKYIGLSEASPDTIR 171
H + P + T M+K + G K IG+S + +
Sbjct: 110 LIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLE 169
Query: 172 RA--HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKA 223
V + ++++ C+ I +V Y LG
Sbjct: 170 MILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWV 223
|
| >d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 3-alpha-hydroxysteroid dehydrogenase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 126 bits (316), Expect = 2e-35
Identities = 50/235 (21%), Positives = 86/235 (36%), Gaps = 33/235 (14%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
RV L G + LG+G +++++ I K A G FD+A Y
Sbjct: 6 LRVALND-GNFIPVLGFGTT-----VPEKVAKDEVIKATKIAIDNGFRHFDSAYLYE--- 56
Query: 70 NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
E +G+A++ + K + PE VR+C E +L+ ++Y+DL
Sbjct: 57 VEEEVGQAIRSKIEDGT---VKREDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDL 113
Query: 130 YYQHR-------------------VDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTI 170
Y H + +V I +T M+K + G K IG+S + +
Sbjct: 114 YIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQL 173
Query: 171 RRA--HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKA 223
R V + +++++ C+ I +V YC LG
Sbjct: 174 ERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTLGSSRDKTWV 228
|
| >d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]} Length = 314 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (307), Expect = 5e-34
Identities = 48/234 (20%), Positives = 79/234 (33%), Gaps = 36/234 (15%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
R+ L G ++ LG G +K A G D A Y
Sbjct: 3 SRILLNN-GAKMPILGLGTWKSP--------PGQVTEAVKVAIDVGYRHIDCAHVYQ--- 50
Query: 70 NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
NE +G A++E RE + K + + V+ C+ +L L ++Y+DL
Sbjct: 51 NENEVGVAIQEKLREQV---VKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDL 107
Query: 130 YYQHRVDTSVP-------------------IEETIGEMKKLVEEGKIKYIGLSEASPDTI 170
Y H P I +T M++LV+EG +K IG+S + +
Sbjct: 108 YLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQV 167
Query: 171 RRA--HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
+ + +++ C+ GI + Y PLG
Sbjct: 168 EMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWA 221
|
| >d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical protein C07D8.6 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 119 bits (299), Expect = 6e-33
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 24/223 (10%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
+KL G+E+ +G G S + I+ +K A G DTA Y
Sbjct: 2 ASIKLSN-GVEMPVIGLGTWQSS--------PAEVITAVKTAVKAGYRLIDTASVYQ--- 49
Query: 70 NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
NE +G A+KEL E + K + + + + P + SL++L +EY+DL
Sbjct: 50 NEEAIGTAIKELLEEGVV---KREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDL 106
Query: 130 YYQHRVD---------TSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
Y H + P+E+ + + + G K +G+S + D I RA A+
Sbjct: 107 YLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTP 166
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKA 223
+ L +++ V C++ I + Y LG
Sbjct: 167 VHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGSPGRVNFT 209
|
| >d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 120 bits (300), Expect = 6e-33
Identities = 57/244 (23%), Positives = 93/244 (38%), Gaps = 33/244 (13%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
V L T G ++ +G G + IK+A + G D A +G NE
Sbjct: 5 VLLHT-GQKMPLIGLGTWKSE--------PGQVKAAIKYALTVGYRHIDCAAIFG---NE 52
Query: 72 ILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYY 131
+ +G+AL+E V + FV K PE V +L L +EY+DLY
Sbjct: 53 LEIGEALQETVGPGKAVPREELFV--TSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYL 110
Query: 132 QHRVDT-------------------SVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR 172
H + ++T ++ LV +G ++ +GLS S I
Sbjct: 111 MHWPYAFERGDNPFPKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDD 170
Query: 173 AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDS 232
+V + L+ +NE++ C+ G+ + Y PLG + E V L+
Sbjct: 171 VLSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRDPNEPVLLEE 230
Query: 233 FLVC 236
+V
Sbjct: 231 PVVQ 234
|
| >d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Xylose reductase species: Fungi (Candida tenuis) [TaxId: 45596]
Score = 117 bits (294), Expect = 4e-32
Identities = 54/239 (22%), Positives = 85/239 (35%), Gaps = 40/239 (16%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
+P +KL + G + +G+GC L+ + A G FD A+ YG
Sbjct: 2 IPDIKLSS-GHLMPSIGFGCWKLA--------NATAGEQVYQAIKAGYRLFDGAEDYG-- 50
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
NE +G +K E + K + L P+ V + +L L V+Y+D
Sbjct: 51 -NEKEVGDGVKRAIDEGL---VKREEIFLTSKLWNNYHDPKNVETALNKTLADLKVDYVD 106
Query: 129 LYYQH-------------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163
L+ H V VPI ET ++KLV GKIK IG+S
Sbjct: 107 LFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVS 166
Query: 164 EASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
+ I L+ + +++ ++ G+ I Y G F
Sbjct: 167 NFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGPQSFVEM 225
|
| >d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Thermotoga maritima [TaxId: 2336]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Thermotoga maritima [TaxId: 2336]
Score = 113 bits (284), Expect = 6e-31
Identities = 51/206 (24%), Positives = 81/206 (39%), Gaps = 17/206 (8%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
QVP+V L G+E+ LGYG + E + A G DTA Y
Sbjct: 1 QVPKVTLNN-GVEMPILGYGVFQIP--------PEKTEECVYEAIKVGYRLIDTAASYM- 50
Query: 68 YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
NE +G+A+K E I + + S + E + E SL++L +EYI
Sbjct: 51 --NEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDV---GYESTKKAFEKSLKKLQLEYI 105
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DLY H+ + M+++ ++G ++ IG+S PD + H I +
Sbjct: 106 DLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIE 163
Query: 188 LWARDIENEIVPLCRELGIGIVPYCP 213
+ E + R I + P
Sbjct: 164 IHPFYQRQEEIEFMRNYNIQPEAWGP 189
|
| >d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Escherichia coli [TaxId: 562]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Escherichia coli [TaxId: 562]
Score = 108 bits (270), Expect = 5e-29
Identities = 52/212 (24%), Positives = 81/212 (38%), Gaps = 22/212 (10%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
+KL G + +LG G S E+ I+ I+ A G DTA Y
Sbjct: 4 TVIKLQD-GNVMPQLGLGVWQAS--------NEEVITAIQKALEVGYRSIDTAAAYK--- 51
Query: 70 NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
NE +GKALK EL T+ + + R SL++L ++YIDL
Sbjct: 52 NEEGVGKALKNASVNRE---------ELFITTKLWNDDHKRPREALLDSLKKLQLDYIDL 102
Query: 130 YYQHRVDTSVPIEETIGEMK-KLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
Y H ++ + +L +EG IK IG+ ++R +T V + L
Sbjct: 103 YLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIEL 162
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220
+ ++ I + PL +G G
Sbjct: 163 HPLMQQRQLHAWNATHKIQTESWSPLAQGGKG 194
|
| >d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: FR-1 (fibroblast growth factor-induced) protein species: Mouse (Mus musculus) [TaxId: 10090]
Score = 108 bits (270), Expect = 1e-28
Identities = 44/229 (19%), Positives = 78/229 (34%), Gaps = 36/229 (15%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
V+L T ++ +G G +K A G D A Y NE
Sbjct: 4 VELST-KAKMPIVGLGTWKSP--------PNQVKEAVKAAIDAGYRHIDCAYAYC---NE 51
Query: 72 ILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYY 131
+G+A++E +E V + + + ++ + +L L ++Y+DLY
Sbjct: 52 NEVGEAIQEKIKEKAVQREDLFIVSKLWPTCF---EKKLLKEAFQKTLTDLKLDYLDLYL 108
Query: 132 QHRVDTSVP-------------------IEETIGEMKKLVEEGKIKYIGLSEASPDTIRR 172
H P E M++LV++G +K +G+S + I R
Sbjct: 109 IHWPQGLQPGKELFPKDDQGRILTSKTTFLEAWEGMEELVDQGLVKALGVSNFNHFQIER 168
Query: 173 --AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219
V + + +++ C GI + Y PLG
Sbjct: 169 LLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGISVTAYSPLGSPDR 217
|
| >d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical oxidoreductase YdhF species: Escherichia coli [TaxId: 562]
Score = 106 bits (265), Expect = 4e-28
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 11/213 (5%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+ + QG E S+ G L +S +S I+ G+T D AD YG Y
Sbjct: 2 VQRITIAPQGPEFSRFVMGYWRLMD---WNMSARQLVSFIEEHLDLGVTTVDHADIYGGY 58
Query: 69 TNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG---TPEYVRSCCEASLRRLD 123
E G+ALK P RE +++ +K G ++ +++ E SL L
Sbjct: 59 QCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLA 118
Query: 124 VEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHP--ITA 181
+++DL HR D + +E K L + GK+++ G+S +P + P +
Sbjct: 119 TDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLAT 178
Query: 182 VQLEWSLWARDI-ENEIVPLCRELGIGIVPYCP 213
Q+E S + + + + ++L + + +
Sbjct: 179 NQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSC 211
|
| >d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Corynebacterium sp. [TaxId: 1720]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Corynebacterium sp. [TaxId: 1720]
Score = 93.9 bits (232), Expect = 1e-23
Identities = 40/206 (19%), Positives = 70/206 (33%), Gaps = 20/206 (9%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
VP + L G + +LGYG + D ++ A G DTA YG
Sbjct: 2 VPSIVLND-GNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYGNE 52
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
+ A + R+++ + TK + + + SL +L ++ +D
Sbjct: 53 -EGVGAAIAASGIARDDLFITTKLWN---------DRHDGDEPAAAIAESLAKLALDQVD 102
Query: 129 LYYQHRVDTSVPIEE-TIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
LY H + +M +L G + IG+S + R A + +
Sbjct: 103 LYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIE 162
Query: 188 LWARDIENEIVPLCRELGIGIVPYCP 213
L + EI + I + P
Sbjct: 163 LHPAYQQREITDWAAAHDVKIESWGP 188
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 249 | |||
| d1pyfa_ | 311 | Putative oxidoreductase IolS {Bacillus subtilis [T | 100.0 | |
| d1pz1a_ | 333 | Putative oxidoreductase YhdN {Bacillus subtilis [T | 100.0 | |
| d1lqaa_ | 346 | Tas protein {Escherichia coli [TaxId: 562]} | 100.0 | |
| d1gvea_ | 324 | Aflatoxin aldehyde reductase (akr7a1) {Rat (Rattus | 100.0 | |
| d1ur3m_ | 298 | Hypothetical oxidoreductase YdhF {Escherichia coli | 100.0 | |
| d3eaua1 | 326 | Voltage-dependent K+ channel beta subunit {Rat (Ra | 100.0 | |
| d1hw6a_ | 262 | 2,5-diketo-D-gluconic acid reductase A {Corynebact | 100.0 | |
| d1afsa_ | 319 | 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus | 100.0 | |
| d1qwka_ | 312 | Hypothetical protein C07D8.6 {Nematode (Caenorhabd | 100.0 | |
| d1us0a_ | 314 | Aldose reductase (aldehyde reductase) {Human (Homo | 100.0 | |
| d1s1pa_ | 315 | Prostaglandin d2 11-ketoreductase (akr1c3) {Human | 100.0 | |
| d1mi3a_ | 319 | Xylose reductase {Fungi (Candida tenuis) [TaxId: 4 | 100.0 | |
| d1mzra_ | 274 | 2,5-diketo-D-gluconic acid reductase A {Escherichi | 100.0 | |
| d1vp5a_ | 284 | 2,5-diketo-D-gluconic acid reductase A {Thermotoga | 100.0 | |
| d1frba_ | 315 | FR-1 (fibroblast growth factor-induced) protein {M | 100.0 | |
| d1hqta_ | 324 | Aldose reductase (aldehyde reductase) {Pig (Sus sc | 100.0 | |
| d2chra1 | 244 | Chlormuconate cycloisomerase {Alcaligenes eutrophu | 94.07 | |
| d1sjda1 | 242 | N-acylamino acid racemase {Amycolatopsis sp. [TaxI | 93.74 | |
| d1nu5a1 | 243 | Chlormuconate cycloisomerase {Pseudomonas sp. p51 | 93.43 | |
| d1jpma1 | 234 | L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: | 92.77 | |
| d1r0ma1 | 243 | N-acylamino acid racemase {Deinococcus radiodurans | 91.59 | |
| d1kcza1 | 253 | beta-Methylaspartase {Clostridium tetanomorphum [T | 90.52 | |
| d1wufa1 | 244 | N-acylamino acid racemase {Listeria innocua [TaxId | 89.66 | |
| d1kkoa1 | 251 | beta-Methylaspartase {Citrobacter amalonaticus [Ta | 89.21 | |
| d1wuea1 | 241 | N-acylamino acid racemase {Enterococcus faecalis [ | 88.85 | |
| d1muca1 | 242 | Muconate-lactonizing enzyme {Pseudomonas putida [T | 87.93 | |
| d1jdfa1 | 309 | D-glucarate dehydratase {Escherichia coli [TaxId: | 87.61 | |
| d1yeya1 | 252 | RTS beta protein {Xanthomonas campestris pv. campe | 85.41 | |
| d1j32a_ | 388 | Aspartate aminotransferase, AAT {Phormidium lapide | 84.76 | |
| d2gdqa1 | 256 | Hypothetical protein YitF {Bacillus subtilis [TaxI | 84.07 | |
| d1olta_ | 441 | Oxygen-independent coproporphyrinogen III oxidase | 83.07 | |
| d1b5pa_ | 382 | Aspartate aminotransferase, AAT {Thermus thermophi | 80.13 |
| >d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase IolS species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=1.4e-50 Score=349.28 Aligned_cols=225 Identities=31% Similarity=0.571 Sum_probs=203.4
Q ss_pred CceecCCCCcccCcceeecccccCC-CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEE
Q 025707 10 PRVKLGTQGLEVSKLGYGCMSLSGC-YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQV 88 (249)
Q Consensus 10 ~~~~lg~~g~~vs~lg~Gt~~~~~~-~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I 88 (249)
++|+||+||++||+||||||++|+. ++...+++++.++|++|++.|||+||||+.||+|.+|+.+|++|+..+|++++|
T Consensus 1 ~~~rLG~tgl~vS~iglGt~~~g~~~~~~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lg~~l~~~~r~~~~i 80 (311)
T d1pyfa_ 1 KKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVI 80 (311)
T ss_dssp CCEECTTSCCEECSBCEECTTSSCTTTCSSCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGCEE
T ss_pred CCcccCCCCCeecceeeeCcccCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEehhhcCCCccHHHHhhhhhcccccceec
Confidence 5899999999999999999999873 334468999999999999999999999999999999999999999888999999
Q ss_pred EecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHH
Q 025707 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPD 168 (249)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~ 168 (249)
+||++...... ....+.+++.+++++++||+||++||+|++++|+++...+.++++++|++|+++|+||+||+|+++++
T Consensus 81 ~tK~~~~~~~~-~~~~~~~~~~i~~s~~~SL~rl~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~Gkir~iGvs~~~~~ 159 (311)
T d1pyfa_ 81 ATKAAHRKQGN-DFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLE 159 (311)
T ss_dssp EEEECEEEETT-EEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCCHH
T ss_pred ceeccCCCCCc-ccccccchHHHHHHHHhhHHhhCCcHHhhhcccCCCcccchhhHHHHHHHHHhCCeEEeecccCCcHH
Confidence 99998765332 23457889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCC-CCCCCCCcccc
Q 025707 169 TIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV-VESVPLDSFLV 235 (249)
Q Consensus 169 ~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~-~~~~~~~~~~~ 235 (249)
.+.++.+..+++++|++||++++....+++++|+++||++++++||++|+|++++. ...++....+.
T Consensus 160 ~~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~~i~v~~~~~l~~G~l~~~~~~~~~~~~~~~~~ 227 (311)
T d1pyfa_ 160 QLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRN 227 (311)
T ss_dssp HHHHHTTTSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCCTTCCCCTTCGGG
T ss_pred HHHHHhhcCCcceEeeeecccchhhhHHHHHHHHHCCceEEEeccccCCccCCCcCcCCCCccccccc
Confidence 99999999999999999999999877889999999999999999999999999944 34455544443
|
| >d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase YhdN species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=4.8e-49 Score=342.85 Aligned_cols=216 Identities=33% Similarity=0.526 Sum_probs=199.7
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeE
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQ 87 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~ 87 (249)
|+||+||+||++||+||||||++|+.+....+++++.++|+.|++.|||+||||+.||+|.+|+.+|++++. ..|++++
T Consensus 1 M~yr~lG~tgl~vs~iglGt~~~g~~~~~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lG~~l~~~~~r~~~~ 80 (333)
T d1pz1a_ 1 MEYTSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQVI 80 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTTCCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGCE
T ss_pred CCCeECCCCCCCccCeeEcCCccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEccCccCCCccHHHHhhccccccccchhh
Confidence 899999999999999999999999866666789999999999999999999999999999999999999987 7899999
Q ss_pred EEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCH
Q 025707 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 167 (249)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~ 167 (249)
++||.+...... ......+++.+.+++++||+||+++|+|++++|+|+...+..++|++|++|+++|+|++||+||++.
T Consensus 81 ~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~sL~rL~~~~iDl~~lH~~d~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~ 159 (333)
T d1pz1a_ 81 LATKTALDWKNN-QLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSI 159 (333)
T ss_dssp EEEEECEEESSS-CEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCCH
T ss_pred cccccccccccc-cccccchHHHHHHHHHhhhhccCCChhhccccccCccccchhhHHHHHHHHHHcCCEEEEeecccch
Confidence 999998654332 2234568899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCC
Q 025707 168 DTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (249)
Q Consensus 168 ~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~ 225 (249)
.++..+.....+..+|+.+|++++....+++++|+++||++++|+|+++|+|++++..
T Consensus 160 ~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~s~l~~G~Lt~~~~~ 217 (333)
T d1pz1a_ 160 EQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTE 217 (333)
T ss_dssp HHHHHHHTTSCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCCT
T ss_pred hhccchhccccccccccccccccccccccccchhhcccccceeccccccccccCccCC
Confidence 9999999888999999999999998889999999999999999999999999999543
|
| >d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Tas protein species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.8e-46 Score=328.04 Aligned_cols=218 Identities=27% Similarity=0.388 Sum_probs=183.3
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcC-------CCchHHHHHHHHHcC
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG-------PYTNEILLGKALKEL 81 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg-------~g~se~~lg~~l~~~ 81 (249)
|+||+||+||++||+||||||++|+ ..+++++.++|+.|++.|||+||||+.|| .|.+|..+|++++..
T Consensus 1 M~yr~lG~tgl~vs~iglGt~~~g~----~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~~~~~~~~G~~E~~~g~~~~~~ 76 (346)
T d1lqaa_ 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH 76 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH
T ss_pred CCCeECCCCCCEecCeeEeCccCCC----CCCHHHHHHHHHHHHHcCCCEEEcccccCCCcccccccchhhhhcchhhhc
Confidence 8999999999999999999998765 35789999999999999999999999998 478999999999873
Q ss_pred -CCCCeEEEecccc-cccC--CcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-----------------CC
Q 025707 82 -PRENIQVATKFGF-VELG--FTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-----------------VP 140 (249)
Q Consensus 82 -~r~~~~I~tK~~~-~~~~--~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-----------------~~ 140 (249)
......+..+... .... ........+++.+++++++||+|||+||||+|++|+|+.. ..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~d~iDl~~lH~~d~~~~~~~~~~~~~~~~~~~~~ 156 (346)
T d1lqaa_ 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_dssp CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC
T ss_pred cccceeeeeecccCCCccccccccccccccHHHHHHHHHHHHHHhCCCeeeeeehhccCccccccccccccccccccccc
Confidence 2333333333322 1111 1123456789999999999999999999999999998733 34
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc------CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccC
Q 025707 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV------HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~------~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl 214 (249)
.+++|++|++|+++|+||+||+||++.+++.++++. .+++++|++||++++..+.+++++|+++||.+++|+||
T Consensus 157 ~~~~~~~l~~l~~~G~ir~iGvS~~~~~~~~~~~~~~~~~~~~~~~~~q~~yn~~~~~~e~~~~~~~~~~~i~v~a~~pl 236 (346)
T d1lqaa_ 157 LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTT
T ss_pred HHHHHHHHHHHHhCCCeeEEEEeccCHHHHHHHHHHhhhcCCCCeEEEeCCCccccchHHHHHHHHHHHhCCeEEEeccc
Confidence 689999999999999999999999999998887653 67999999999999987789999999999999999999
Q ss_pred cccccCCCCCCCCCCC
Q 025707 215 GRGFFGGKAVVESVPL 230 (249)
Q Consensus 215 ~~G~l~g~~~~~~~~~ 230 (249)
++|+|+|++.....|.
T Consensus 237 ~~G~Ltg~~~~~~~~~ 252 (346)
T d1lqaa_ 237 GFGTLTGKYLNGAKPA 252 (346)
T ss_dssp GGGGGGTTTGGGCCCT
T ss_pred ccccccCCccCCCCCc
Confidence 9999999965444443
|
| >d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical oxidoreductase YdhF species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.1e-46 Score=320.05 Aligned_cols=212 Identities=25% Similarity=0.360 Sum_probs=188.6
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCC
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~ 85 (249)
.|++++||++|++||+||||||++++ |+ .+++++.++|++|++.|||+||||+.||+|.+|+.+|++|+. .+|++
T Consensus 1 ~m~~~~lg~~G~~vs~ig~G~~~~~~-~~--~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~g~se~~lG~al~~~~~~r~~ 77 (298)
T d1ur3m_ 1 LVQRITIAPQGPEFSRFVMGYWRLMD-WN--MSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRER 77 (298)
T ss_dssp CCCEEECSTTCCEEESSEEECTTTTT-TT--CCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTT
T ss_pred CCCceEeCCCCCEeCCEEEeCcccCC-CC--CCHHHHHHHHHHHHHcCCCEEEeccccCCccccccccccccccccchhh
Confidence 38999999999999999999999986 43 578999999999999999999999999999999999999986 46999
Q ss_pred eEEEecccccccCC---cccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 025707 86 IQVATKFGFVELGF---TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 162 (249)
Q Consensus 86 ~~I~tK~~~~~~~~---~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 162 (249)
++|+||++...... .....+.+++.+++++++||+|||+||||+|++|+++...+.+++|++|++++++|+||+||+
T Consensus 78 ~~i~tK~g~~~~~~~~~~~~~~~~s~~~i~~~~~~SL~rL~~d~iDl~~lH~~d~~~~~~e~~~~l~~lk~~GkIr~iG~ 157 (298)
T d1ur3m_ 78 MEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGV 157 (298)
T ss_dssp CEEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEE
T ss_pred hhhhhcccccccCCCcCcccCCCCCHHHHHHHHHhhhhhhccccccccccccccccchhHHHHHHHHHhhccCcceeecC
Confidence 99999998765331 122446789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhcCC--ceEEeeecCccccchh-hhHHHHHHHhCCcEEecccCcccccCCC
Q 025707 163 SEASPDTIRRAHAVHP--ITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (249)
Q Consensus 163 s~~~~~~l~~~~~~~~--~~~~q~~~n~~~~~~~-~~~~~~~~~~gi~v~a~spl~~G~l~g~ 222 (249)
|||+++.++.+....+ +..+|++||++++... ..+...|++++|.+++++||++|.+.+.
T Consensus 158 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~ 220 (298)
T d1ur3m_ 158 SNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFND 220 (298)
T ss_dssp ESCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSC
T ss_pred CCCcHHHHHHHHhhhcccccccccccCchhhhhhhhhhhhhHhhcCEeeeecccccccccccc
Confidence 9999999999887644 4556777888876543 6788999999999999999999998875
|
| >d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Voltage-dependent K+ channel beta subunit species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.3e-45 Score=318.31 Aligned_cols=212 Identities=28% Similarity=0.460 Sum_probs=189.3
Q ss_pred ceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCeEE
Q 025707 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQV 88 (249)
Q Consensus 11 ~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~~I 88 (249)
||+||+||++||+||||||+. ||...+++++.++|++|++.|||+||||+.||+|.+|+.||++++. ..|++++|
T Consensus 4 YR~lG~tg~~vs~iglGt~~~---~g~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lG~~l~~~~~~r~~~~i 80 (326)
T d3eaua1 4 YRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVI 80 (326)
T ss_dssp EEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEE
T ss_pred cccCCCCCCcccCeeecCCCc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHhHHHHhcCCcceeEEe
Confidence 899999999999999999964 4455789999999999999999999999999999999999999987 57999999
Q ss_pred EecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCCHH
Q 025707 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPD 168 (249)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~ 168 (249)
+||++..... ....+.+++.+++++++||++||+||||++++|+|+...+.++.++.+.+++++|+++++|+|+++..
T Consensus 81 ~tk~~~~~~~--~~~~~~~~~~~~~s~~~SL~rL~~d~iDl~~lH~pd~~~~~~e~~~~~~~~~~~g~~~~~g~s~~~~~ 158 (326)
T d3eaua1 81 TTKIFWGGKA--ETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSM 158 (326)
T ss_dssp EEEESBCCSS--GGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHH
T ss_pred eeeccccccc--ccccCccHHHHHHHHHHHHhhcCccceeeecccCCCccccchhhhcccceeeeeeccccccccccccc
Confidence 9999876533 22346789999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHhh------cCCceEEeeecCccccchh-hhHHHHHHHhCCcEEecccCcccccCCCCCCCC
Q 025707 169 TIRRAHA------VHPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGKAVVES 227 (249)
Q Consensus 169 ~l~~~~~------~~~~~~~q~~~n~~~~~~~-~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~~~ 227 (249)
...+... ..++.++|..+|++++... .+++++|+++||+|++++||++|+|++++....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~v~~~spl~~G~l~~~~~~~~ 224 (326)
T d3eaua1 159 EIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGI 224 (326)
T ss_dssp HHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTTSC
T ss_pred hhhhhhcchhccCCCceeeeccccchhhhhhhHHHHHHHHHHcCCEEEeecccccCccccccCCCC
Confidence 7665433 2578899999999987544 679999999999999999999999999976544
|
| >d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Corynebacterium sp. [TaxId: 1720]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Corynebacterium sp. [TaxId: 1720]
Probab=100.00 E-value=3e-45 Score=308.92 Aligned_cols=218 Identities=21% Similarity=0.303 Sum_probs=181.5
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCC
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~ 85 (249)
|+|.++| ++|.+||+||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.++.+++. .+|++
T Consensus 1 ~ip~~~l-~~G~~v~~ig~Gt~~~--------~~~~~~~~l~~A~d~Gi~~~DTA~~YG---~ee~~~~~~~~~~~~r~~ 68 (262)
T d1hw6a_ 1 TVPSIVL-NDGNSIPQLGYGVFKV--------PPADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDD 68 (262)
T ss_dssp CCCEEEC-TTSCEEESBCEECCSC--------CGGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGGG
T ss_pred CCCeEEC-CCCCEecceeeeCCCC--------ChHHHHHHHHHHHHcCCCEEEcccccC---ChhhhCcccccCCCCcce
Confidence 5788999 7899999999999975 457889999999999999999999999 55566666654 68999
Q ss_pred eEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCC-CHHHHHHHHHHHHHcCCeeEEEcCC
Q 025707 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSV-PIEETIGEMKKLVEEGKIKYIGLSE 164 (249)
Q Consensus 86 ~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~-~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (249)
+++.||.+... .+++.+++++++||+|||+||||+|++|+++... ..+++|++|++|+++|+||+||+||
T Consensus 69 ~~~~tk~~~~~---------~~~~~~~~sl~~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~ 139 (262)
T d1hw6a_ 69 LFITTKLWNDR---------HDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSN 139 (262)
T ss_dssp CEEEEEECCC--------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred EEEeeeccccc---------ccccchhhhhhhhhhhcccceeeeeeeeccCCCCccchhhHHHHHHHHHhCcceeeeccc
Confidence 99999997653 5678899999999999999999999999998765 4789999999999999999999999
Q ss_pred CCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCC--CCCCCCcccccCCCcce
Q 025707 165 ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV--ESVPLDSFLVCFSSISV 242 (249)
Q Consensus 165 ~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~--~~~~~~~~~~~~~~~~~ 242 (249)
++.+.++++....++.++|++||+..+..+..++++|+++||.+++|+||++|.+...... ..++ .++..+.+++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~a~~pl~~G~~~~~~~~~l~~~a-~~~g~t~aq~al 218 (262)
T d1hw6a_ 140 HLVPHLERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDVKIESWGPLGQGKYDLFGAEPVTAAA-AAHGKTPAQAVL 218 (262)
T ss_dssp CCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGGGSSCCTTSHHHHHHH-HHHTCCHHHHHH
T ss_pred ccchhhhhHhhhcccCCccceechhhccccccchhhHHHcCcEEEEeeccccccccccccchhhhHH-HHcCCCHHHHHH
Confidence 9999999999888888899999998887778899999999999999999999977544211 1111 134456667778
Q ss_pred eeeee
Q 025707 243 SFCFI 247 (249)
Q Consensus 243 ~~~~~ 247 (249)
+|++.
T Consensus 219 ~~~l~ 223 (262)
T d1hw6a_ 219 RWHLQ 223 (262)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88764
|
| >d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 3-alpha-hydroxysteroid dehydrogenase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.3e-44 Score=308.75 Aligned_cols=199 Identities=26% Similarity=0.374 Sum_probs=171.9
Q ss_pred cccCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-----
Q 025707 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE----- 80 (249)
Q Consensus 6 ~~~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~----- 80 (249)
|..|++|..+++|.+||+||||||.++. .+++++.++|+.|++.|||+||||+.|| +|+.+|++|++
T Consensus 1 ~~~~~~r~~~~~G~~ip~iGlGt~~~~~-----~~~~~~~~~i~~A~d~Gin~~DTA~~Yg---sE~~lG~~l~~~~~~~ 72 (319)
T d1afsa_ 1 MDSISLRVALNDGNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDG 72 (319)
T ss_dssp CCGGGCEEECTTSCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTT
T ss_pred CCccCceEECCCcCEEcCEeeECCCCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHhhhhhc
Confidence 5567888888999999999999997554 4678899999999999999999999998 89999999976
Q ss_pred -CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCC
Q 025707 81 -LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVP 140 (249)
Q Consensus 81 -~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~ 140 (249)
..|+.+++.+|.+... .+++.++.++++||++||+||||++++|+|+. ..+
T Consensus 73 ~~~~~~~~~~~~~~~~~---------~~~~~~~~s~e~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~ 143 (319)
T d1afsa_ 73 TVKREDIFYTSKLWSTF---------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVD 143 (319)
T ss_dssp SCCGGGCEEEEEECGGG---------CSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCC
T ss_pred cccceeeeecccccccc---------cchhhHHHHHHHHHhhcCCcccceeEeccccCCCCCccccCccccccccccCCC
Confidence 5788999999987543 56888999999999999999999999999864 234
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC--C--ceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcc
Q 025707 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--P--ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGR 216 (249)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~--~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~ 216 (249)
++++|++|++|+++|+||+||+||++.+.++++++.. + +.++|+.+++... ..+++++|+++||++++|+||++
T Consensus 144 ~~e~~~~l~~l~~~Gkir~iGvSn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~i~i~a~spl~~ 221 (319)
T d1afsa_ 144 ICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLN--QSKMLDYCKSKDIILVSYCTLGS 221 (319)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTSC
T ss_pred HHHHHHHHHHHHHcCCEEEEeeccccHHHHHHHHHhhcccccccccccchhhccc--hHHHhHHHHHcCceecccccccc
Confidence 8899999999999999999999999999999987763 3 3455555555443 47899999999999999999999
Q ss_pred cccCCCC
Q 025707 217 GFFGGKA 223 (249)
Q Consensus 217 G~l~g~~ 223 (249)
|.++...
T Consensus 222 G~~~~~~ 228 (319)
T d1afsa_ 222 SRDKTWV 228 (319)
T ss_dssp CCCTTTS
T ss_pred ccccCcc
Confidence 9988763
|
| >d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical protein C07D8.6 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.5e-43 Score=305.56 Aligned_cols=191 Identities=28% Similarity=0.413 Sum_probs=171.2
Q ss_pred ceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CCCC
Q 025707 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPRE 84 (249)
Q Consensus 11 ~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~r~ 84 (249)
..+| ++|++||+||||||++ +++++.++|+.|+++|||+||||+.|| +|+.+|++|++ ..|+
T Consensus 3 ~~kL-~tG~~vs~lg~Gt~~~--------~~~~~~~~i~~Al~~Gin~~DTA~~Yg---sE~~lG~al~~~~~~~~~~r~ 70 (312)
T d1qwka_ 3 SIKL-SNGVEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVKRE 70 (312)
T ss_dssp EEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCCGG
T ss_pred cEEC-CCCCccccceeECCCC--------CHHHHHHHHHHHHHcCCCEEEChhhhc---CHHHHHHHHHHhhhccccccc
Confidence 4688 7899999999999863 578999999999999999999999998 89999999986 5799
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC---------CCCHHHHHHHHHHHHHcC
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT---------SVPIEETIGEMKKLVEEG 155 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~---------~~~~~~~~~~l~~l~~~G 155 (249)
++++.+|.+... .+++.+++++++||+|||+||+|+|++|+|+. ..+++++|++|++++++|
T Consensus 71 ~~~i~~k~~~~~---------~~~~~~~~~~~~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~ee~~~~l~~l~~~G 141 (312)
T d1qwka_ 71 ELFITTKAWTHE---------LAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAG 141 (312)
T ss_dssp GCEEEEEECTTT---------SSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHHTT
T ss_pred cceeeccccccc---------ccchhHHHHHHHHhhhcCCCcceeeecccCCcccccccccccCcHHHHHHHHHHHHhcC
Confidence 999999987543 56889999999999999999999999999864 356899999999999999
Q ss_pred CeeEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCC
Q 025707 156 KIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (249)
Q Consensus 156 ~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~ 222 (249)
+||+||+||++.++++++++...+.+++..++...+..+.+++++|+++||++++|+||++|.+.+.
T Consensus 142 ~ir~iG~Sn~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~spL~~g~~~~~ 208 (312)
T d1qwka_ 142 LAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGSPGRVNF 208 (312)
T ss_dssp SBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCSCCEECC
T ss_pred ccccccccccchhHHHHHhhccccchhhhhhcchhhcccHHHHHHHHhcCccccccCcccccccccC
Confidence 9999999999999999999987777777777766665568899999999999999999999877665
|
| >d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-42 Score=295.77 Aligned_cols=194 Identities=25% Similarity=0.364 Sum_probs=168.8
Q ss_pred CCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CC
Q 025707 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LP 82 (249)
Q Consensus 9 m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~ 82 (249)
|++|.+++||++||.||||||++ +++++.++|++|+++|||+||||+.|| +|+.+|++|++ ..
T Consensus 1 ~~~r~~~~tG~~vs~iglGtw~~--------~~~~~~~~i~~A~~~Gin~fDTA~~Yg---sE~~lG~~l~~~~~~~~~~ 69 (314)
T d1us0a_ 1 MASRILLNNGAKMPILGLGTWKS--------PPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVK 69 (314)
T ss_dssp CCSEEECTTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSC
T ss_pred CCCceECCCcCEecceeeECCCC--------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHhhhhccccc
Confidence 78999999999999999999863 689999999999999999999999999 89999999987 34
Q ss_pred CCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCHHH
Q 025707 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIEE 143 (249)
Q Consensus 83 r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~~ 143 (249)
|.+..+.++.... ..+++.+++++++||++|++||||++++|+++. ...+++
T Consensus 70 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~SL~rl~~d~idl~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (314)
T d1us0a_ 70 REELFIVSKLWCT---------YHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILD 140 (314)
T ss_dssp GGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred ccccccccccccc---------cccchhhHHHHHHHhhhcCCCceeeeeeccCCCCCcccccCCcccccccCCCCCCHHH
Confidence 5555665555433 367899999999999999999999999999853 245789
Q ss_pred HHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc----CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCccccc
Q 025707 144 TIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219 (249)
Q Consensus 144 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~----~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l 219 (249)
+|++|++||++|+||+||+||++++++++++.. ..+.++|+.+|+... +.+++++|+++||++++++||++|.+
T Consensus 141 ~~~~L~~lk~~G~Ir~iGvS~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~~i~~~~~~pl~~g~~ 218 (314)
T d1us0a_ 141 TWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLT--QEKLIQYCQSKGIVVTAYSPLGSPDR 218 (314)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCTTC
T ss_pred HHHHHHHHHHcCCeeEeeccCCCHHHHHHHHHhccCCcCchhhhhhcchhhh--HHHHHHHHHHcCCeeeccCccccccc
Confidence 999999999999999999999999999988766 346678888887665 36899999999999999999999998
Q ss_pred CCCCC
Q 025707 220 GGKAV 224 (249)
Q Consensus 220 ~g~~~ 224 (249)
.+...
T Consensus 219 ~~~~~ 223 (314)
T d1us0a_ 219 PWAKP 223 (314)
T ss_dssp TTCCT
T ss_pred cccCc
Confidence 88743
|
| >d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Prostaglandin d2 11-ketoreductase (akr1c3) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-41 Score=292.02 Aligned_cols=193 Identities=26% Similarity=0.369 Sum_probs=172.2
Q ss_pred ceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CCCC
Q 025707 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPRE 84 (249)
Q Consensus 11 ~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~r~ 84 (249)
.++| ++|++||+||||||++|. .+++++.++|++|+++|||+||||+.|| +|+.+|++|+. .+|+
T Consensus 2 ~~~l-~~G~~ip~lGlGt~~~g~-----~~~~~~~~~l~~A~d~Gin~fDTA~~Yg---sE~~lG~~l~~~~~~~~~~~~ 72 (315)
T d1s1pa_ 2 CVKL-NDGHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKRE 72 (315)
T ss_dssp EEEC-TTSCEEESEEEECCCCTT-----SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGG
T ss_pred eEEC-CCCCeecceeeecCCCCC-----CCHHHHHHHHHHHHHcCCCEEEcCCccC---CHHHHHHHHHHHHHhcccccc
Confidence 4678 999999999999998654 4788999999999999999999999999 89999999986 5899
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCC-------------------CCHHHHH
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-------------------VPIEETI 145 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~-------------------~~~~~~~ 145 (249)
++++.||..... .+++.+++++++||++||+||||+|++|+|+.. .++.++|
T Consensus 73 ~~~~~t~~~~~~---------~~~~~v~~~~~~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (315)
T d1s1pa_ 73 DIFYTSKLWSTF---------HRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTW 143 (315)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHH
T ss_pred cccccccccccc---------CCccchhhhHHHHHHhhCCCchhhccccCCCCCCcccccCccccccccccccccHHHHH
Confidence 999999987543 679999999999999999999999999998652 3478899
Q ss_pred HHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc----CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCC
Q 025707 146 GEMKKLVEEGKIKYIGLSEASPDTIRRAHAV----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGG 221 (249)
Q Consensus 146 ~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~----~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g 221 (249)
++|++|+++|+||+||+||++++++++++.. ..+.++|+.+++.... .+++++|+++||++++|+||++|.++.
T Consensus 144 ~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~i~v~a~~pl~~g~~~~ 221 (315)
T d1s1pa_ 144 EAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVAYSALGSQRDKR 221 (315)
T ss_dssp HHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCCCCTT
T ss_pred HHHHHHHHcCcccccCCCCCCHHHHHHHHHhhccccCcchhhccccccccH--HHHHHHHHHcCCccccccccccccccc
Confidence 9999999999999999999999999988765 4567889988887663 679999999999999999999998886
Q ss_pred CC
Q 025707 222 KA 223 (249)
Q Consensus 222 ~~ 223 (249)
..
T Consensus 222 ~~ 223 (315)
T d1s1pa_ 222 WV 223 (315)
T ss_dssp TS
T ss_pred cc
Confidence 63
|
| >d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Xylose reductase species: Fungi (Candida tenuis) [TaxId: 45596]
Probab=100.00 E-value=1.5e-40 Score=287.29 Aligned_cols=193 Identities=28% Similarity=0.464 Sum_probs=169.9
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------C
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------L 81 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~ 81 (249)
+||.++| ++|++||+||||||++ +.+++.++|+.|+++|||+||||+.|| +|+.+|++|++ .
T Consensus 1 ~~p~~~L-~sG~~vs~lg~Gt~~~--------~~~ea~~~i~~Ald~Gin~fDTA~~YG---sE~~lG~~l~~~~~~~~~ 68 (319)
T d1mi3a_ 1 SIPDIKL-SSGHLMPSIGFGCWKL--------ANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGLV 68 (319)
T ss_dssp CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEc-CCCCEeccceeECCCC--------ChHHHHHHHHHHHHcCCCEEECCCccC---CHHHHHHHHHHHhhhccc
Confidence 5899999 6899999999999975 468899999999999999999999999 89999999986 4
Q ss_pred CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC------------------------
Q 025707 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT------------------------ 137 (249)
Q Consensus 82 ~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~------------------------ 137 (249)
.+.++.+.+|.... ..+++.+++++++||+||++||||++++|+|..
T Consensus 69 ~~~~~~~~~~~~~~---------~~~~~~i~~~~~~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (319)
T d1mi3a_ 69 KREEIFLTSKLWNN---------YHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVY 139 (319)
T ss_dssp CGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCB
T ss_pred cccccccccccccc---------cccchhhhhhhHHHHhhccccchhhhhccCccccccccccccCCccccccccccccC
Confidence 45666676665533 367999999999999999999999999998732
Q ss_pred -CCCHHHHHHHHHHHHHcCCeeEEEcCCCCHHHHHHHhhc--CCceEEeeecCccccchhhhHHHHHHHhCCcEEecccC
Q 025707 138 -SVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPL 214 (249)
Q Consensus 138 -~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl 214 (249)
..++++++++|++|+++|+||+||+||++++++.++... ..+.++|.+|++.++. .+++++|+++++.+++++||
T Consensus 140 ~~~~~~e~~~~l~~l~~~Gkir~iG~S~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~--~~l~~~~~~~~i~~~a~~pl 217 (319)
T d1mi3a_ 140 EDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITAYSSF 217 (319)
T ss_dssp CCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHCCCEeecccCCCchHHHHHHHhhcCCCchhhhccccccccc--HHHHHHHHHhhccceeccCC
Confidence 245889999999999999999999999999999888766 4567899999998884 68999999999999999999
Q ss_pred cccccCCCC
Q 025707 215 GRGFFGGKA 223 (249)
Q Consensus 215 ~~G~l~g~~ 223 (249)
+.|.++...
T Consensus 218 ~~~~~~~~~ 226 (319)
T d1mi3a_ 218 GPQSFVEMN 226 (319)
T ss_dssp TTHHHHTTT
T ss_pred ccccccccc
Confidence 999987663
|
| >d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1e-40 Score=282.78 Aligned_cols=213 Identities=27% Similarity=0.319 Sum_probs=178.4
Q ss_pred ceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc--CCCCCeEE
Q 025707 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQV 88 (249)
Q Consensus 11 ~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~--~~r~~~~I 88 (249)
..+| |+|.+||+||||||++ +++++.++|++|+++|||+||||+.|| +|+.+|++|+. ..|++++|
T Consensus 5 ~~~l-n~G~~ip~ig~G~~~~--------~~~ea~~~l~~A~d~Gin~~DTA~~Yg---sE~~lG~~l~~~~~~~~~~~i 72 (274)
T d1mzra_ 5 VIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNREELFI 72 (274)
T ss_dssp EEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCGGGCEE
T ss_pred EEEC-CCCCcccCeeEECCCC--------CHHHHHHHHHHHHHcCCCEEECcCccC---CHHHHHHHhhccccccccccc
Confidence 4678 9999999999999974 579999999999999999999999998 89999999987 56899999
Q ss_pred EecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCC-CHHHHHHHHHHHHHcCCeeEEEcCCCCH
Q 025707 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSV-PIEETIGEMKKLVEEGKIKYIGLSEASP 167 (249)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~-~~~~~~~~l~~l~~~G~ir~iGvs~~~~ 167 (249)
+||.... +++.+.+++++||+||++||||++++|+++... ...++|++|++|+++|+||+||+||++.
T Consensus 73 ~tk~~~~-----------~~~~~~~~~~~Sl~rL~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~i~~iGvs~~~~ 141 (274)
T d1mzra_ 73 TTKLWND-----------DHKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQI 141 (274)
T ss_dssp EEEECGG-----------GTTCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred ccccccc-----------cchhHHHHHHHHHHhcCCCeEEEEEecCCCccchhHHHHHHHHHHHHHCCCEEEEeeccccc
Confidence 9998643 356789999999999999999999999998654 5667999999999999999999999999
Q ss_pred HHHHHHhhcCCceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCCC--CCCCCCcccccCCCcceeee
Q 025707 168 DTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV--ESVPLDSFLVCFSSISVSFC 245 (249)
Q Consensus 168 ~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~~--~~~~~~~~~~~~~~~~~~~~ 245 (249)
.++.+++...++..+|..+++........++++|+++|+.|++++|+++|........ ..++ ..+..+.++++++|+
T Consensus 142 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~a~~pl~~G~~~~~~~~~l~~ia-~~~g~t~aq~Al~w~ 220 (274)
T d1mzra_ 142 HHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLA-DKYGKTPAQIVIRWH 220 (274)
T ss_dssp HHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTTTCTTTTTSHHHHHHH-HHHTCCHHHHHHHHH
T ss_pred hHHHHHHHhcCCCceeeehhhcccccchhhhhhhhhcceeEEEcChhhcCCCccchhHHHHHHH-HHhCCCHHHHHHHHH
Confidence 9999988886666677777776665568899999999999999999999965443211 1111 133445667788887
Q ss_pred ee
Q 025707 246 FI 247 (249)
Q Consensus 246 ~~ 247 (249)
+.
T Consensus 221 l~ 222 (274)
T d1mzra_ 221 LD 222 (274)
T ss_dssp HH
T ss_pred hc
Confidence 64
|
| >d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.7e-39 Score=276.60 Aligned_cols=213 Identities=26% Similarity=0.394 Sum_probs=175.0
Q ss_pred cCCceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------C
Q 025707 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------L 81 (249)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~ 81 (249)
++|+++| +||++||+||||||++ +.+++.++|+.|+++|||+||||+.|| +|+.+|++|+. .
T Consensus 1 ~ip~~~l-~tG~~vs~iglGt~~~--------~~~~~~~~i~~A~d~Gin~~DTA~~Yg---sE~~~G~~l~~~~~~~~~ 68 (284)
T d1vp5a_ 1 QVPKVTL-NNGVEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIV 68 (284)
T ss_dssp CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEC-CCCCEecceeeECCCC--------CHHHHHHHHHHHHHcCCCEEEcCcccC---CHHHHHHHHHhhhccccc
Confidence 4788999 6899999999999975 568999999999999999999999999 79999999976 4
Q ss_pred CCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEE
Q 025707 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG 161 (249)
Q Consensus 82 ~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG 161 (249)
.|+++++.+|.+... .+++.+++++++||+|||+||||++++|+|+ ...++++++|++|+++|+||+||
T Consensus 69 ~~~~~~i~~~~~~~~---------~~~~~~~~~~~~SL~rL~~d~iD~~~~H~p~--~~~~~~~~al~~l~~~GkIr~iG 137 (284)
T d1vp5a_ 69 RREELFVTTKLWVSD---------VGYESTKKAFEKSLKKLQLEYIDLYLIHQPF--GDVHCAWKAMEEMYKDGLVRAIG 137 (284)
T ss_dssp CGGGCEEEEEECGGG---------CSSHHHHHHHHHHHHHHTCSCEEEEEECSSC--SCHHHHHHHHHHHHHTTSEEEEE
T ss_pred ccccccccccccccc---------cCcHHHHHHHHHHHHHhccCchhhhhccccc--cchhhHHHHHHHHhhCCeEeEEe
Confidence 789999999987543 6789999999999999999999999999986 45789999999999999999999
Q ss_pred cCCCCHHHHHHHhhcCC--ceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCC--CCCCCCCcccccC
Q 025707 162 LSEASPDTIRRAHAVHP--ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV--VESVPLDSFLVCF 237 (249)
Q Consensus 162 vs~~~~~~l~~~~~~~~--~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~--~~~~~~~~~~~~~ 237 (249)
+||++++++.++....+ +..+|+.++.... ...++++|.++|+.+++++|+..+....... ...++ ..+..+.
T Consensus 138 vSn~~~~~~~~~~~~~~~~~~~~q~~~~~~~~--~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~l~~ia-~~~g~s~ 214 (284)
T d1vp5a_ 138 VSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQ--RQEEIEFMRNYNIQPEAWGPFAEGRKNIFQNGVLRSIA-EKYGKTV 214 (284)
T ss_dssp EESCCHHHHHHHHHHCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTGGGGGGGGGCHHHHHHH-HHHTCCH
T ss_pred eccCCHHHHHHHHhhccCCCchhhhhhhhhhh--hHHHHHHHHHcCCcccccCCccccccccccHHHHHHHH-HHcCCCH
Confidence 99999999998877744 5566666666555 4678999999999999999998765332211 01111 1334455
Q ss_pred CCcceeeee
Q 025707 238 SSISVSFCF 246 (249)
Q Consensus 238 ~~~~~~~~~ 246 (249)
+++.++|++
T Consensus 215 ~q~al~w~l 223 (284)
T d1vp5a_ 215 AQVILRWLT 223 (284)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 566666654
|
| >d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: FR-1 (fibroblast growth factor-induced) protein species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.2e-39 Score=277.67 Aligned_cols=190 Identities=23% Similarity=0.354 Sum_probs=164.0
Q ss_pred ceecCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc------CCCC
Q 025707 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPRE 84 (249)
Q Consensus 11 ~~~lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~------~~r~ 84 (249)
+.+| +||++||.||||||++ +++++.++|++|+++|||+||||+.|| +|+.+|++|++ ..|+
T Consensus 3 ~~~l-~tg~~ip~iGlGtw~~--------~~~~a~~~i~~Ald~Gin~fDTA~~YG---sE~~lG~~L~~~~~~~~~~~~ 70 (315)
T d1frba_ 3 FVEL-STKAKMPIVGLGTWKS--------PPNQVKEAVKAAIDAGYRHIDCAYAYC---NENEVGEAIQEKIKEKAVQRE 70 (315)
T ss_dssp EEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGG
T ss_pred EEEC-CCCCcccccceECCCC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHHhcccccc
Confidence 5778 8999999999999863 679999999999999999999999999 79999999976 4677
Q ss_pred CeEEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCHHHHH
Q 025707 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIEETI 145 (249)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~~~~ 145 (249)
+.++.+|..... .+++.+++++++||+||+++++|++++|+++. ..++++++
T Consensus 71 ~~~~~~~~~~~~---------~~~~~v~~~~~~sL~rl~~~~iD~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 141 (315)
T d1frba_ 71 DLFIVSKLWPTC---------FEKKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPGKELFPKDDQGRILTSKTTFLEAW 141 (315)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSSCBCCSSCSSCBCTTSCBCBCSCCHHHHH
T ss_pred cccccccccccc---------cchHHHHHHHHHhhhcccchhhhhhhccCCCCCCCcccccccccccccccccCCHHHHH
Confidence 788888876443 67899999999999999999999999999854 23578999
Q ss_pred HHHHHHHHcCCeeEEEcCCCCHHHHHHHhhcC----CceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCC
Q 025707 146 GEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGG 221 (249)
Q Consensus 146 ~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g 221 (249)
++|++|+++|+||+||+||++++.+++++... .+..+|+.++.... +..++++|+++|+++++++||++|.+..
T Consensus 142 ~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~i~~~~~~pl~~g~~~~ 219 (315)
T d1frba_ 142 EGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLT--QEKLIQYCHSKGISVTAYSPLGSPDRPS 219 (315)
T ss_dssp HHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCTTSTT
T ss_pred HHHHHHHHCCCccccccccccHHHHHHHHHHhhhcccccccccccCchhh--hHHHHHHHHHcCCccccccccccccccc
Confidence 99999999999999999999999999888762 34455555554443 4789999999999999999999998887
Q ss_pred CC
Q 025707 222 KA 223 (249)
Q Consensus 222 ~~ 223 (249)
..
T Consensus 220 ~~ 221 (315)
T d1frba_ 220 AK 221 (315)
T ss_dssp CC
T ss_pred cc
Confidence 73
|
| >d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=3.8e-39 Score=279.20 Aligned_cols=189 Identities=28% Similarity=0.447 Sum_probs=166.1
Q ss_pred cCCCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-------CCCCCe
Q 025707 14 LGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-------LPRENI 86 (249)
Q Consensus 14 lg~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-------~~r~~~ 86 (249)
++|||++||.||||||++ +++++.++|++|++.|||+||||+.|| +|+.+|++|+. .+|+++
T Consensus 6 ~lntG~~is~lglGtw~~--------~~~~a~~~l~~A~~~Gin~~DTA~~Yg---sE~~lG~al~~~~~~~~~~~r~~~ 74 (324)
T d1hqta_ 6 LLHTGQKMPLIGLGTWKS--------EPGQVKAAIKYALTVGYRHIDCAAIFG---NELEIGEALQETVGPGKAVPREEL 74 (324)
T ss_dssp ECTTSCEEESBCBBCTTC--------CTTTHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHTTTBSSSSSBCGGGC
T ss_pred ECCCcCEehhheeECCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhcccceeecccc
Confidence 459999999999999963 557899999999999999999999999 89999999985 568888
Q ss_pred EEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCC-------------------CCCHHHHHHH
Q 025707 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIEETIGE 147 (249)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~-------------------~~~~~~~~~~ 147 (249)
++.+|..... .+++.++.++++||+||++||||++++|+++. ..++++++++
T Consensus 75 ~~~~~~~~~~---------~~~~~~~~~~~~SL~rl~~d~idl~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~a 145 (324)
T d1hqta_ 75 FVTSKLWNTK---------HHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTIRYDATHYKDTWKA 145 (324)
T ss_dssp EEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESCSSCBCCSSCSSCEETTTEECBCCCCHHHHHHH
T ss_pred ccCccccccc---------chhHHHHHHHHHHHhccccceeeeecccCCcccccCCCcccccccccccccccchhhHHHH
Confidence 9988876443 67999999999999999999999999999854 2468899999
Q ss_pred HHHHHHcCCeeEEEcCCCCHHHHHHHhhcCC--ceEEeeecCccccchhhhHHHHHHHhCCcEEecccCcccccCCCCC
Q 025707 148 MKKLVEEGKIKYIGLSEASPDTIRRAHAVHP--ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (249)
Q Consensus 148 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~--~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~spl~~G~l~g~~~ 224 (249)
|++|+++|+||+||+||+++.++.++..... +.++|..++.... ..+++++|+++||.+++|+||++|.++.++.
T Consensus 146 l~~l~~~G~Ir~iG~Sn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~gi~~~~~~pl~~g~~~~~~~ 222 (324)
T d1hqta_ 146 LEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLA--QNELIAHCQARGLEVTAYSPLGSSDRAWRDP 222 (324)
T ss_dssp HHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTCCTTCSSCCC
T ss_pred HHHHHHcCCeeeecccCCCHHHHHHHhhhcccCccccccccchhhh--hHHHHHHHHHcCCCcccccCccccccccccc
Confidence 9999999999999999999999999888744 5566666666554 4789999999999999999999999998844
|
| >d2chra1 c.1.11.2 (A:127-370) Chlormuconate cycloisomerase {Alcaligenes eutrophus [TaxId: 106590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Chlormuconate cycloisomerase species: Alcaligenes eutrophus [TaxId: 106590]
Probab=94.07 E-value=0.85 Score=35.03 Aligned_cols=158 Identities=9% Similarity=0.039 Sum_probs=98.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
++++..+.++...+.|++.|=.--...+-..+...-+++++.-.+++.|..-... .++.+...+-+ +.|
T Consensus 17 ~~~~~~~~~~~~~~~Gf~~~KiKvG~~~~~~D~~~v~~ir~~~g~~~~l~vDaN~----------~~~~~~A~~~~-~~l 85 (244)
T d2chra1 17 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQ----------AWDEQVASVYI-PEL 85 (244)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHHHHHHHHTTTTSEEEEECTT----------CCCTHHHHHHH-HHH
T ss_pred cHHHHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHhcCCCceEEEeCCC----------CcchHHHHHHH-HHH
Confidence 5677778888888889999987433221111222223444433444444433221 24455444333 345
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.++ ++++..|-...+ ++.+.+|+++-.|. ..|=+.++...+.++++...++++|+..+.+-. .....+
T Consensus 86 ~~~~-----i~~iEeP~~~~d----~~~~~~l~~~~~ipia~~E~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~~i 156 (244)
T d2chra1 86 EALG-----VELIEQPVGREN----TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKI 156 (244)
T ss_dssp HTTT-----CCEEECCSCSSC----HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHH
T ss_pred hhhh-----HHHHhhhhhhcc----chhhhhhccceeeeeeecccccccchhhhhhhcceeEEEeeccccccchHHHHHH
Confidence 5555 456776644333 45667777764443 447778999999999998889999998665432 123789
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+....+
T Consensus 157 ~~~a~~~gi~~~~~~~~~~~ 176 (244)
T d2chra1 157 AAVAEASGIASYGGTMLDST 176 (244)
T ss_dssp HHHHHHHTCEECCCCCSCCH
T ss_pred HHHHHHcCCCeeeccccccc
Confidence 99999999998877666544
|
| >d1sjda1 c.1.11.2 (A:126-367) N-acylamino acid racemase {Amycolatopsis sp. [TaxId: 37632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Amycolatopsis sp. [TaxId: 37632]
Probab=93.74 E-value=0.98 Score=34.46 Aligned_cols=154 Identities=10% Similarity=0.025 Sum_probs=98.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|=.-- |....-+.+ +++++.-.+++.|..-... .++.+...+ +.+ |
T Consensus 16 ~~~~~~~~~~~~~~~Gf~~~Kikv--g~~~Di~~i-~~ir~~~g~~~~l~vDaN~----------~~~~~~a~~-~~~-l 80 (242)
T d1sjda1 16 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPV-RAVRERFGDDVLLQVDANT----------AYTLGDAPQ-LAR-L 80 (242)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHH-HHHHHHHCTTSEEEEECTT----------CCCGGGHHH-HHT-T
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEC--CchhHHHHH-HHHHHHhCCCeeEeecccc----------ccchhhhhH-Hhh-h
Confidence 678888999999999999975432 212233333 3444422345555444321 133333322 332 3
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+. .++.++..|-...+ +..+.++++...+. ..|=+.++...+.++++...++++|...+..-.- ....+
T Consensus 81 ~~-----~~~~~iEeP~~~~d----~~~~~~l~~~~~~pia~gE~~~~~~~~~~~~~~~~~d~~~~d~~~~GGit~~~~i 151 (242)
T d1sjda1 81 DP-----FGLLLIEQPLEEED----VLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRV 151 (242)
T ss_dssp GG-----GCCSEEECCSCTTC----HHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred hh-----hhhHHHHhhhhhhh----HHHHHHHHhccCcccccccccccchhhhhhhhcCccCEEEeccccCccchhhhHH
Confidence 33 45667777755444 45567777776654 3466778999999999988899999987654321 22789
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.+...+....+
T Consensus 152 ~~~A~~~~i~~~~h~~~~~~ 171 (242)
T d1sjda1 152 HDVCAAHGIPVWCGGMIETG 171 (242)
T ss_dssp HHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHCCCEEeecccccch
Confidence 99999999999988776554
|
| >d1nu5a1 c.1.11.2 (A:127-369) Chlormuconate cycloisomerase {Pseudomonas sp. p51 [TaxId: 65067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Chlormuconate cycloisomerase species: Pseudomonas sp. p51 [TaxId: 65067]
Probab=93.43 E-value=1.1 Score=34.25 Aligned_cols=158 Identities=11% Similarity=0.039 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
++++..+.++...+.|++.|=.--...+-..+...-+++++.-.+++.|.--.. ..++++...+-+ +.|
T Consensus 17 ~~~~~~e~~~~~~~~G~~~~KiKvG~~~~~~Di~~v~~ir~~~g~~~~l~vDaN----------~~~~~~~A~~~~-~~l 85 (243)
T d1nu5a1 17 TARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAVGDRASVRVDVN----------QGWDEQTASIWI-PRL 85 (243)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHHGGGCEEEEECT----------TCCCHHHHHHHH-HHH
T ss_pred hHHHHHHHHHHHHhCCCCEEEEEeCCCCHHHHHHHHHHHHHHhCcccceEEECC----------CCccchhHHHHH-HHh
Confidence 567777777777778999997643222101111222333332233444443221 124555544333 445
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~ 197 (249)
+.+++ .++..|-...+ ++.+.+|++.-.|. ..|-+.++...+..+++...++++|+..+..-. .....+
T Consensus 86 ~~~~~-----~~iEeP~~~~~----~~~~~~l~~~~~ipIa~gE~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~~i 156 (243)
T d1nu5a1 86 EEAGV-----ELVEQPVPRAN----FGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKV 156 (243)
T ss_dssp HHHTC-----CEEECCSCTTC----HHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred cchhh-----hhhhhhhhhcc----ccccccchhccccccccccccccchhhhhccccccccccccccccccchHHHHHH
Confidence 55554 56666654443 46677787765543 346677899999999998888999998665432 112789
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+.+..+
T Consensus 157 ~~~a~~~gi~~~~~~~~~s~ 176 (243)
T d1nu5a1 157 AAVAEAAGISSYGGTMLDST 176 (243)
T ss_dssp HHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHcCCCcccccccchh
Confidence 99999999999887776543
|
| >d1jpma1 c.1.11.2 (A:126-359) L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: L-Ala-D/L-Glu epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=92.77 E-value=1.5 Score=33.22 Aligned_cols=159 Identities=8% Similarity=0.052 Sum_probs=98.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC-CchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~-g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+++.|++.|=.--.-.+ ....+.+. ++++.-.+++.|.--.. ..++.+.. .+.
T Consensus 15 ~pe~~~~~a~~~~~~G~~~~Kikig~~~~~~d~~~i~-~ir~~~g~~~~i~vD~N----------~~~~~~~a----~~~ 79 (234)
T d1jpma1 15 SPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQ-EIRKRVGSAVKLRLDAN----------QGWRPKEA----VTA 79 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHH-HHHHHHGGGSEEEEECT----------TCSCHHHH----HHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH-HHHHHcCchhhhhhhcc----------cccchHHH----HHH
Confidence 5788999999999999999865321110 01122222 22221112333322211 12344433 333
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
++.|....++++++..|-...+ ++.+.++++.-.+ -..|-+.++...+.++++...++++|...+..-. .....
T Consensus 80 ~~~le~~~~~i~~~EeP~~~~d----~~~~~~l~~~~~~pia~gE~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~~ 155 (234)
T d1jpma1 80 IRKMEDAGLGIELVEQPVHKDD----LAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAEK 155 (234)
T ss_dssp HHHHHHTTCCEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHHHHhccCceeeecCCccccC----HHHHHHhhccccceeecccccccchhhhhhhccCCcCeEEEeeecCCCHHHHHH
Confidence 4455433467888988865544 4666777766444 3557788899999999988889999997665432 12378
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+.++
T Consensus 156 i~~~a~~~g~~~~~~~~~~~~ 176 (234)
T d1jpma1 156 INAMAEACGVECMVGSMIETK 176 (234)
T ss_dssp HHHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHhcCeeEeecccccCC
Confidence 999999999999887766544
|
| >d1r0ma1 c.1.11.2 (A:133-375) N-acylamino acid racemase {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Deinococcus radiodurans [TaxId: 1299]
Probab=91.59 E-value=2.1 Score=32.47 Aligned_cols=152 Identities=15% Similarity=0.125 Sum_probs=96.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (249)
+.++..+.++.+++.|++.|=.-- |.+...+.+. ++++ .+ + +.|..-. +. .++.+...+ + ..
T Consensus 16 ~~e~~~~~~~~~~~~G~~~~KiKv--g~~~D~~~v~-~ir~~~~-d-~~l~vD~--n~--------~~~~~~a~~-~-~~ 78 (243)
T d1r0ma1 16 DEQATVDLVRRHVEQGYRRIKLKI--KPGWDVQPVR-ATREAFP-D-IRLTVDA--NS--------AYTLADAGR-L-RQ 78 (243)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHHH-HHHHHCT-T-SCEEEEC--TT--------CCCGGGHHH-H-HT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEc--CcchhHHHHH-HHHHhcc-C-ceEEEec--cc--------cCchHHHHH-h-hh
Confidence 788888999999999999886432 2223344444 4444 44 2 2232221 11 233333222 3 22
Q ss_pred HHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhh
Q 025707 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENE 196 (249)
Q Consensus 119 L~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~ 196 (249)
|.. .++.++..|-...+ ++.+.++++.-.+. +.|=+.++...+.++++...++++|...+.+-.- ....
T Consensus 79 l~~-----~~~~~iEeP~~~~d----~~~~~~l~~~~~ipia~gE~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~~ 149 (243)
T d1r0ma1 79 LDE-----YDLTYIEQPLAWDD----LVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRR 149 (243)
T ss_dssp TGG-----GCCSCEECCSCTTC----SHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHH
T ss_pred hhh-----ccchhhhhhccccc----hHHHHHHhhcCCcccccccchhhhhhhhhhhhcccccceecccceeccHHHHHH
Confidence 333 35566766654433 45566666654443 4577888999999999988899999987765422 2278
Q ss_pred HHHHHHHhCCcEEecccCccc
Q 025707 197 IVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~spl~~G 217 (249)
+.+.|+++|+.++..+.+..+
T Consensus 150 i~~~A~~~gi~v~~h~~~~~~ 170 (243)
T d1r0ma1 150 VHDVAQSFGAPVWCGGMLESG 170 (243)
T ss_dssp HHHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHHCCCceecccccccc
Confidence 999999999999998876654
|
| >d1kcza1 c.1.11.2 (A:161-413) beta-Methylaspartase {Clostridium tetanomorphum [TaxId: 1553]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: beta-Methylaspartase species: Clostridium tetanomorphum [TaxId: 1553]
Probab=90.52 E-value=2.9 Score=32.23 Aligned_cols=103 Identities=11% Similarity=0.029 Sum_probs=73.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc----CC-e-eEEEcCCCCHHHHHHHhhcCCc
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE----GK-I-KYIGLSEASPDTIRRAHAVHPI 179 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~----G~-i-r~iGvs~~~~~~l~~~~~~~~~ 179 (249)
++++...+-+. .|.+...+| ++ ++..|-...+.++.++.|.++++. |. | -..+=+.++++.+.++++..-.
T Consensus 89 ~~~~eai~~~~-~L~~~~~~y-~i-~iEqP~~~~d~~~~~e~~a~lr~~~~~~g~~vpI~~DE~~~~~~d~~~~i~~~a~ 165 (253)
T d1kcza1 89 VDIKAMADYIQ-TLAEAAKPF-HL-RIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAG 165 (253)
T ss_dssp TCHHHHHHHHH-HHHHHHTTS-CE-EEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCS
T ss_pred CCHHHHHHHHH-HHHHhcCCC-Cc-eEecCCCCccHhhHHHHHHHHHHHHhccCCccceeccccccCHHHHHHHHHhCCc
Confidence 55665544443 444555566 55 688888888888888888888765 22 2 2335577889999999998888
Q ss_pred eEEeeecCccccc-hhhhHHHHHHHhCCcEEec
Q 025707 180 TAVQLEWSLWARD-IENEIVPLCRELGIGIVPY 211 (249)
Q Consensus 180 ~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~ 211 (249)
+++|+..+-+-.- ...+++++|+++|+.++.-
T Consensus 166 d~v~iK~~k~GGi~~al~~~~~a~~~Gi~~~vg 198 (253)
T d1kcza1 166 HMVQIKTPDLGGVNNIADAIMYCKANGMGAYCG 198 (253)
T ss_dssp SEEEECTGGGSSTHHHHHHHHHHHHTTCEEEEC
T ss_pred CeeeccccccCCHHHHHHHHHHHHHcCCcEEEc
Confidence 9999987754321 2378999999999998853
|
| >d1wufa1 c.1.11.2 (A:1127-1370) N-acylamino acid racemase {Listeria innocua [TaxId: 1642]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Listeria innocua [TaxId: 1642]
Probab=89.66 E-value=3.2 Score=31.38 Aligned_cols=153 Identities=13% Similarity=0.079 Sum_probs=97.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|-.-- |....-+.+ +++++.-. ++-+.-- .+. .++.+... .+
T Consensus 16 ~~e~~~~~~~~~~~~Gf~~~Kikv--g~~~D~~~v-~~ir~~~~-~~~l~vD--aN~--------~~~~~~a~-~~---- 76 (244)
T d1wufa1 16 NVETLLQLVNQYVDQGYERVKLKI--APNKDIQFV-EAVRKSFP-KLSLMAD--ANS--------AYNREDFL-LL---- 76 (244)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--BTTBSHHHH-HHHHTTCT-TSEEEEE--CTT--------CCCGGGHH-HH----
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEe--CCcHHHHHH-HHHHHhcc-chhhhhh--hhc--------cccchhhh-hh----
Confidence 688899999999999999975432 222333444 46665322 3444322 111 23444332 22
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
++| +..++.++..|-...+ ++.+.++++.-.+. ..|=+.++...+.++++..-++++|...+-.-.- ...++
T Consensus 77 ~~l--~~~~~~wiEeP~~~~d----~~~~~~l~~~~~~pia~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~ki 150 (244)
T d1wufa1 77 KEL--DQYDLEMIEQPFGTKD----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKI 150 (244)
T ss_dssp HTT--GGGTCSEEECCSCSSC----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHH
T ss_pred hcc--cccchhhhcCcccccc----hhhhhccccccccccccCccccchhhhhhhccccccceeecccccccchhhHHHH
Confidence 333 3335567777754443 45577788775554 3477789999999999988899999986654331 12778
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.+...+....+
T Consensus 151 ~~~a~~~gi~v~~h~~~~~~ 170 (244)
T d1wufa1 151 AEYCALNEILVWCGGMLEAG 170 (244)
T ss_dssp HHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHcCCEEecCCCCCcc
Confidence 99999999999988655443
|
| >d1kkoa1 c.1.11.2 (A:161-411) beta-Methylaspartase {Citrobacter amalonaticus [TaxId: 35703]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: beta-Methylaspartase species: Citrobacter amalonaticus [TaxId: 35703]
Probab=89.21 E-value=3.7 Score=31.61 Aligned_cols=106 Identities=13% Similarity=0.034 Sum_probs=71.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc----CC-ee-EEEcCCCCHHHHHHHhhcCCc
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE----GK-IK-YIGLSEASPDTIRRAHAVHPI 179 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~----G~-ir-~iGvs~~~~~~l~~~~~~~~~ 179 (249)
++++...+-+.+ |.+...+| ++ ++..|-+....++-++.+.++.++ |. |. .-+=+.++.+.+.++++..-.
T Consensus 89 ~~~~~ai~~l~~-L~~~~~~~-~l-~IEqP~~~~~~~~d~~gl~~l~~~l~~~g~~vpI~~DE~~~t~~d~~~~i~~~a~ 165 (251)
T d1kkoa1 89 MDPVRCAEYIAS-LEKEAQGL-PL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSC 165 (251)
T ss_dssp TCHHHHHHHHHH-TGGGGTTS-CE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHH-HHHhcCCC-ce-eecCCcccccchHHHHHHHHHHHHHhccCCCceEeccceeCCHHHHHHHHHhCCc
Confidence 456655544443 33334456 45 688887666677777777777654 32 32 335567788999999998889
Q ss_pred eEEeeecCccccc-hhhhHHHHHHHhCCcEEec-ccC
Q 025707 180 TAVQLEWSLWARD-IENEIVPLCRELGIGIVPY-CPL 214 (249)
Q Consensus 180 ~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~-spl 214 (249)
+++|+..+-+-.= ...+++.+|+++|+.++.. +..
T Consensus 166 d~v~iK~~k~GGi~~a~~~~~~A~~~Gi~~~~g~~~~ 202 (251)
T d1kkoa1 166 HMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTCN 202 (251)
T ss_dssp SEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCTT
T ss_pred cceeccccccCCHHHHHHHHHHHHHCCCeEEEeCccc
Confidence 9999987765432 1278999999999998743 444
|
| >d1wuea1 c.1.11.2 (A:1127-1367) N-acylamino acid racemase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Enterococcus faecalis [TaxId: 1351]
Probab=88.85 E-value=2 Score=32.45 Aligned_cols=153 Identities=13% Similarity=0.031 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|=.-- |.+...+.+ +++++...+ +.|.- ..+. .++.+...+ +
T Consensus 16 ~~~~~~~~~~~~~~~G~~~~Kikv--g~~~D~~~v-~~ir~~~~d-~~l~v--DaN~--------~~~~~~a~~-~---- 76 (241)
T d1wuea1 16 DLPQLLKQVQLAVEKGYQRVKLKI--RPGYDVEPV-ALIRQHFPN-LPLMV--DANS--------AYTLADLPQ-L---- 76 (241)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHCTT-SCEEE--ECTT--------CCCGGGHHH-H----
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEc--CccHHHHHH-HHHHHhccc-cceee--cccc--------cCCHHHhhh-h----
Confidence 678888999999999999886532 112233333 445542222 33332 1111 234443322 3
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
.++- -.+++++..|-...+ ++.+.++++.-.+. +.|-+-++...+..+++...++++|...+.+-.- ...++
T Consensus 77 ~~~~--~~~i~~iEeP~~~~~----~~~~~~l~~~~~~pIa~gE~~~~~~~~~~~i~~~~~d~i~~d~~~~GGit~~~~i 150 (241)
T d1wuea1 77 QRLD--HYQLAMIEQPFAADD----FLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALKI 150 (241)
T ss_dssp HGGG--GSCCSCEECCSCTTC----SHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhhh--hhhhhhhcCcccccc----hhhhhhhhcccccccccCcccccchhhhhhhhhhhhhhhccccccccCcHHHHHH
Confidence 3331 235666766644333 46677888776664 3477888999999999988899999976543321 23789
Q ss_pred HHHHHHhCCcEEecccCccc
Q 025707 198 VPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (249)
.+.|+++|+.++..+....+
T Consensus 151 ~~~a~~~~i~v~~~~~~~~~ 170 (241)
T d1wuea1 151 AAFCQENDLLVWLGGMFESG 170 (241)
T ss_dssp HHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHcCCEEEeccccccc
Confidence 99999999999887755443
|
| >d1muca1 c.1.11.2 (A:131-372) Muconate-lactonizing enzyme {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Muconate-lactonizing enzyme species: Pseudomonas putida [TaxId: 303]
Probab=87.93 E-value=4.3 Score=30.64 Aligned_cols=156 Identities=10% Similarity=-0.063 Sum_probs=91.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHH--HHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEIL--LGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~--lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (249)
++++..+.++..-+.|++.|=.--.-. .-+.- .-+++++.-.+++.|.--... .++++...+ +-+
T Consensus 17 ~~~~~~~~~~~~~~~G~~~~KiKvG~~--~~~~Di~~i~~ir~~~g~~~~l~vDaN~----------~~~~~~A~~-~~~ 83 (242)
T d1muca1 17 TARDIAEARHMLEIRRHRVFKLKIGAN--PVEQDLKHVVTIKRELGDSASVRVDVNQ----------YWDESQAIR-ACQ 83 (242)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEECSSS--CHHHHHHHHHHHHHHHGGGSEEEEECTT----------CBCHHHHHH-HHH
T ss_pred cHHHHHHHHHHHHHCCCCEEEEEECCC--CHHHHHHHHHHHHHHhCCCCEEEEecCC----------CCcHHHHHH-HHH
Confidence 455555666655567999996532111 11222 222333212233444333211 234554433 335
Q ss_pred HHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCee-EEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhh
Q 025707 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (249)
Q Consensus 118 sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~ 195 (249)
.|+.+++ .++..|-...+ ++.+.+|+++-.+. ..|-+.++...+.++++...++++|+..+..-. ....
T Consensus 84 ~l~~~~i-----~~iEeP~~~~d----~~~~~~L~~~~~~pIa~~E~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~ 154 (242)
T d1muca1 84 VLGDNGI-----DLIEQPISRIN----RGGQVRLNQRTPAPIMADESIESVEDAFSLAADGAASIFALKIAKNGGPRAVL 154 (242)
T ss_dssp HHHHTTC-----CCEECCBCTTC----HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHH
T ss_pred HhhhhhH-----HHhhcchhhhh----hhhhhhhhhhhhheeecccccccccchhhhhhcccccccccccccchhHHHHH
Confidence 5666665 44555543333 45667777665443 447777899999999988889999998665432 1127
Q ss_pred hHHHHHHHhCCcEEecccCccc
Q 025707 196 EIVPLCRELGIGIVPYCPLGRG 217 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl~~G 217 (249)
.+.+.|+++|+.++..+.+..+
T Consensus 155 ~i~~~A~~~gi~~~~~~~~~~~ 176 (242)
T d1muca1 155 RTAQIAEAAGIGLYGGTMLEGS 176 (242)
T ss_dssp HHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHhCCCCcccccccccc
Confidence 8999999999999988776554
|
| >d1jdfa1 c.1.11.2 (A:138-446) D-glucarate dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: D-glucarate dehydratase species: Escherichia coli [TaxId: 562]
Probab=87.61 E-value=1.6 Score=34.80 Aligned_cols=158 Identities=11% Similarity=0.088 Sum_probs=95.0
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCcCCCchHHHHHHHHHc-CCCCCeEEEecccccccCCcccccCCCHHHHHHHHH
Q 025707 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (249)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~Dta~~Yg~g~se~~lg~~l~~-~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (249)
.+.++..+..+++++. |++.|-.--.-.....+...-+++++ .+..++.|=. +. .++.+. +++
T Consensus 46 ~~p~~~~~~a~~~~~~~Gf~~~KiKvG~~~~~~di~~v~avr~~~pd~~l~vDa----N~--------~~s~~~---Ai~ 110 (309)
T d1jdfa1 46 MTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDP----NG--------AWSLNE---AIK 110 (309)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHCTTSCEEEEC----TT--------BBCHHH---HHH
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHHHHHHCCCCeEEeec----cC--------CCCHHH---HHH
Confidence 4677778888888876 99988542111111233333344544 5544444311 11 234443 332
Q ss_pred HHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCe-eEEEcCCCCHHHHHHHhhcCCceEEeeecCccccchhh
Q 025707 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIEN 195 (249)
Q Consensus 117 ~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~ 195 (249)
..+.|. + ++.++..|-...+.....+.+.+++++-.| -+.|-+.++...+.++++...++++|.....---....
T Consensus 111 -~~~~le--~-~l~w~EEPv~~~d~~~~~~~l~~lr~~~~ipIa~gE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~~~ 186 (309)
T d1jdfa1 111 -IGKYLK--G-SLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSV 186 (309)
T ss_dssp -HHHHTT--T-TCSCEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBCCHHHHCHHHHH
T ss_pred -HHHHHh--h-cchhhhhhcccCcchhhHHHHHHhhcccccceecCcccchhhhhhhhhhhccceeeecccccccchHHH
Confidence 445553 3 466677764443333345666777766444 36788889999999999988888888864321111237
Q ss_pred hHHHHHHHhCCcEEecccCc
Q 025707 196 EIVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 196 ~~~~~~~~~gi~v~a~spl~ 215 (249)
.+.+.|+++|+.+...+...
T Consensus 187 kia~lA~~~gi~v~~H~~~~ 206 (309)
T d1jdfa1 187 RVAQMCHEFGLTWGSHSDNH 206 (309)
T ss_dssp HHHHHHHHHTCCCBCCCCSC
T ss_pred HHHHHHHhcCCCccccCCCC
Confidence 89999999999998876543
|
| >d1yeya1 c.1.11.2 (A:184-435) RTS beta protein {Xanthomonas campestris pv. campestris [TaxId: 340]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: RTS beta protein species: Xanthomonas campestris pv. campestris [TaxId: 340]
Probab=85.41 E-value=4.5 Score=30.69 Aligned_cols=152 Identities=11% Similarity=0.105 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|=.--.-+ -......-+++++.-.+++.|.--... .++.+...+ .+
T Consensus 15 s~ee~~~~a~~~~~~Gf~~~KikvG~~-~~~di~~v~~vr~~~g~~~~l~vDaN~----------~~~~~~A~~----~~ 79 (252)
T d1yeya1 15 SDEKLVRLAKEAVADGFRTIKLKVGAN-VQDDIRRCRLARAAIGPDIAMAVDANQ----------RWDVGPAID----WM 79 (252)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCSSSEEEEECTT----------CCCHHHHHH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEECCCC-HHHHHHHHHHHHHHhCCCceEeecccc----------CcchHHHHH----HH
Confidence 457888999999999999986432111 012222223343322234444333321 244443322 33
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc--CCeeEEEcCCCCHHHHHHHhhcCCceEEeeecCcccc-chhhh
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE--GKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~--G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~ 196 (249)
+.| +-+++.++..|-...+... +.+++++ +.--..|-+.++...+.++++..-++++|+..+-.-. ....+
T Consensus 80 ~~l--~~~~~~~iEeP~~~~d~~~----~~~~~~~~~~ipia~gE~~~~~~~~~~~i~~~a~d~~~~d~~~~GGit~~~k 153 (252)
T d1yeya1 80 RQL--AEFDIAWIEEPTSPDDVLG----HAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLA 153 (252)
T ss_dssp HTT--GGGCCSCEECCSCTTCHHH----HHHHHHHSTTSCEECCTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHHH
T ss_pred Hhh--hhcCceeecCCcchhhHHH----HHHHhhccCCCceeccccccchhhhhhHhhccccceeccccccccCchhhhH
Confidence 333 3446677777755444333 3343332 3444568888999999999999889999998766532 12278
Q ss_pred HHHHHHHhCCcEEecc
Q 025707 197 IVPLCRELGIGIVPYC 212 (249)
Q Consensus 197 ~~~~~~~~gi~v~a~s 212 (249)
+.+.|+++|+.+...+
T Consensus 154 ia~~A~~~~i~v~~h~ 169 (252)
T d1yeya1 154 ILLLAAKFGVRVFPHA 169 (252)
T ss_dssp HHHHHHHHTCEECCCC
T ss_pred HHHHHHHcCCEEecCC
Confidence 9999999999987654
|
| >d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Phormidium lapideum [TaxId: 32060]
Probab=84.76 E-value=6.5 Score=31.63 Aligned_cols=160 Identities=18% Similarity=0.175 Sum_probs=85.7
Q ss_pred CCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC--Cc--hHHHHHHHHHc-----CCCCCeE
Q 025707 17 QGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP--YT--NEILLGKALKE-----LPRENIQ 87 (249)
Q Consensus 17 ~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~--g~--se~~lg~~l~~-----~~r~~~~ 87 (249)
.|..|-.++.|.-.+ . +.+...+.+..+++.|++ .|++ |. --+.+.+++.. ...++++
T Consensus 28 ~g~~vi~l~~G~p~~------~-~p~~v~~a~~~~~~~~~~------~Y~~~~G~~~lR~aia~~~~~~~g~~~~~~~i~ 94 (388)
T d1j32a_ 28 EGIDVCSFSAGEPDF------N-TPKHIVEAAKAALEQGKT------RYGPAAGEPRLREAIAQKLQRDNGLCYGADNIL 94 (388)
T ss_dssp TTCCCEECCCSSCSS------C-CCHHHHHHHHHHHHTTCC------SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred CCCCeEECCCCCCCC------C-CCHHHHHHHHHHHhcCCC------CCCCCCCCHHHHHHHHHHHHHhcccCCCCceEE
Confidence 355555566554221 1 235677888889998875 3543 22 22445555543 3456666
Q ss_pred EEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeEEEcC---C
Q 025707 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS---E 164 (249)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs---~ 164 (249)
|++= ..+++...+..+ ++.=|-+++..|.... .. ..+ ++ ..+++..+-.. +
T Consensus 95 it~G-------------------~~~al~~~~~~~-~~~gd~Vlv~~P~y~~-~~---~~~-~~-~~~~~v~~~~~~~~~ 148 (388)
T d1j32a_ 95 VTNG-------------------GKQSIFNLMLAM-IEPGDEVIIPAPFWVS-YP---EMV-KL-AEGTPVILPTTVETQ 148 (388)
T ss_dssp EESH-------------------HHHHHHHHHHHH-CCTTCEEEEESSCCTH-HH---HHH-HH-TTCEEEEECCCGGGT
T ss_pred EcCC-------------------HHHHHHHHHHHH-hCCCCEEEEcCCCcHH-HH---HHH-HH-hcCeEEEEecccccc
Confidence 6531 234445555554 2334778888875521 11 111 11 12333333221 1
Q ss_pred --CCHHHHHHHhhc-CCceEEeeecCcccc----chhhhHHHHHHHhCCcEEecccCc
Q 025707 165 --ASPDTIRRAHAV-HPITAVQLEWSLWAR----DIENEIVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 165 --~~~~~l~~~~~~-~~~~~~q~~~n~~~~----~~~~~~~~~~~~~gi~v~a~spl~ 215 (249)
.+.+.+++.+.. .+.-++-.+-|+.-. ....+++++|+++|+.|+.=-++.
T Consensus 149 ~~~d~~~l~~~~~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~ 206 (388)
T d1j32a_ 149 FKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYE 206 (388)
T ss_dssp TCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred cCCCHHHHHHhCCCCCeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhh
Confidence 356777776543 223344445555432 223889999999999999766654
|
| >d2gdqa1 c.1.11.2 (A:119-374) Hypothetical protein YitF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Hypothetical protein YitF species: Bacillus subtilis [TaxId: 1423]
Probab=84.07 E-value=7.1 Score=29.59 Aligned_cols=153 Identities=10% Similarity=0.008 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCchHHHHHHHHHcCCCCCeEEEecccccccCCcccccCCCHHHHHHHHHHHH
Q 025707 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (249)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~g~se~~lg~~l~~~~r~~~~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (249)
+.++..+.++.+++.|++.|=.--.-.+-..+...-+++++.-.+++.|..-... .++.+.. + +.+
T Consensus 21 ~~~~~~~~~~~~~~~Gf~~~Kikvg~~~~~~di~~v~avr~~~G~~~~l~vDan~----------~~~~~~A---~-~~~ 86 (256)
T d2gdqa1 21 WISRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTAGSSITMILDANQ----------SYDAAAA---F-KWE 86 (256)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHH---H-TTH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHcCCCeEEeecccc----------CCCHHHH---H-HHH
Confidence 3467778888889999999865321000011222224454422244444443321 2333322 2 233
Q ss_pred HHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCCeeE-EEcCCCCHHHHHHHhhcCCceEEeeecCccccc-hhhhH
Q 025707 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEI 197 (249)
Q Consensus 120 ~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~ 197 (249)
+.|. ++..+.++..|-...+ ++.+.+|+++..+.- .|=+.++...+.++++...++++|...+.+-.- ...++
T Consensus 87 ~~l~-~~~~i~~~EeP~~~~d----~~~~~~l~~~~~ipIa~gE~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~i 161 (256)
T d2gdqa1 87 RYFS-EWTNIGWLEEPLPFDQ----PQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDC 161 (256)
T ss_dssp HHHT-TCSCEEEEECCSCSSC----HHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHH
T ss_pred HHHh-hcCceeEeccccccch----HHHHHHHhhcccceeecCccccchhhHHHHHHhhcceeeeccccccccHHHHHHH
Confidence 4443 3445677877755443 566778887766663 466778999999999998899999987765321 23789
Q ss_pred HHHHHHhCCcEEec
Q 025707 198 VPLCRELGIGIVPY 211 (249)
Q Consensus 198 ~~~~~~~gi~v~a~ 211 (249)
.+.|+++|+.+...
T Consensus 162 ~~~a~~~~i~v~~h 175 (256)
T d2gdqa1 162 LQLARYFGVRASAH 175 (256)
T ss_dssp HHHHHHHTCEECCC
T ss_pred HHHHhhhccccccc
Confidence 99999999998654
|
| >d1olta_ c.1.28.2 (A:) Oxygen-independent coproporphyrinogen III oxidase HemN {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Radical SAM enzymes family: Oxygen-independent coproporphyrinogen III oxidase HemN domain: Oxygen-independent coproporphyrinogen III oxidase HemN species: Escherichia coli [TaxId: 562]
Probab=83.07 E-value=1 Score=37.96 Aligned_cols=60 Identities=15% Similarity=0.197 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEe-ecCCCC-----------CCHHH----HHHHHHHHHHcCCeeEEEcCCCCH
Q 025707 106 GTPEYVRSCCEASLRRLDVEYIDLYYQ-HRVDTS-----------VPIEE----TIGEMKKLVEEGKIKYIGLSEASP 167 (249)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~d~iDl~~l-h~~~~~-----------~~~~~----~~~~l~~l~~~G~ir~iGvs~~~~ 167 (249)
.+.+.+.+.++..++ |+.|+|.++-+ |.|... ...++ ...+.+.|.+.|.. .+|+++|..
T Consensus 214 qT~~~~~~tl~~~~~-l~pd~is~y~~~~~p~~~~~q~~~~~~~lp~~~~~~~~~~~~~~~L~~~GY~-~~~~~~far 289 (441)
T d1olta_ 214 QTPESFAFTLKRVAE-LNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQ-FIGMDHFAR 289 (441)
T ss_dssp CCHHHHHHHHHHHHH-HCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCE-EEETTEEEC
T ss_pred cchHHHHHHHHHHHh-hCCCccccccceeccchhHhhhhccccchhhhHHHHHHHHHHHHHHHHcCch-hhhHHHhhh
Confidence 578889999988754 89999999987 444321 11222 33445667777775 589998753
|
| >d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: AAT-like domain: Aspartate aminotransferase, AAT species: Thermus thermophilus [TaxId: 274]
Probab=80.13 E-value=7.3 Score=31.12 Aligned_cols=160 Identities=15% Similarity=0.099 Sum_probs=84.2
Q ss_pred CCCcccCcceeecccccCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC--Cc--hHHHHHHHHHc-----CCCCCe
Q 025707 16 TQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP--YT--NEILLGKALKE-----LPRENI 86 (249)
Q Consensus 16 ~~g~~vs~lg~Gt~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dta~~Yg~--g~--se~~lg~~l~~-----~~r~~~ 86 (249)
..|.+|-.++.|-..+ . ..+...+.+..|++.|++ .|++ |. -.+.+.+++.. ...+++
T Consensus 28 ~~G~~vi~l~~g~p~~------~-~p~~i~~a~~~~~~~~~~------~Y~~~~G~~~lR~~ia~~~~~~~~~~~~~~~i 94 (382)
T d1b5pa_ 28 RQGVDLVALTAGEPDF------D-TPEHVKEAARRALAQGKT------KYAPPAGIPELREALAEKFRRENGLSVTPEET 94 (382)
T ss_dssp HTTCCCEECCCSSCSS------C-CCHHHHHHHHHHHHTTCC------SCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGE
T ss_pred hCCCCeEECCCCCCCC------C-CCHHHHHHHHHHHhcCCc------CCCCCCCCHHHHHHHHhhhhhhcccccccccc
Confidence 4455666666665432 1 246677888889988864 3543 22 22455555543 345667
Q ss_pred EEEecccccccCCcccccCCCHHHHHHHHHHHHHHcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcC-CeeEEEcC--
Q 025707 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLS-- 163 (249)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvs-- 163 (249)
+|+.= ...++...+..+- +.=|-+++..|.... .. ..++..| ++..+=..
T Consensus 95 ~it~G-------------------~~~al~~~~~~l~-~~gd~vl~~~P~y~~-~~------~~~~~~g~~~~~v~~~~~ 147 (382)
T d1b5pa_ 95 IVTVG-------------------GSQALFNLFQAIL-DPGDEVIVLSPYWVS-YP------EMVRFAGGVVVEVETLPE 147 (382)
T ss_dssp EEESH-------------------HHHHHHHHHHHHC-CTTCEEEEEESCCTH-HH------HHHHHTTCEEEEEECCGG
T ss_pred eecCC-------------------HHHHHHHHHHHhC-CCCCEEEECCCCcHH-HH------HHHHHhcCeEEEEecccc
Confidence 66431 2344555555552 233778888875431 11 1222233 23333111
Q ss_pred ---CCCHHHHHHHhhcC-CceEEeeecCccc----cchhhhHHHHHHHhCCcEEecccCc
Q 025707 164 ---EASPDTIRRAHAVH-PITAVQLEWSLWA----RDIENEIVPLCRELGIGIVPYCPLG 215 (249)
Q Consensus 164 ---~~~~~~l~~~~~~~-~~~~~q~~~n~~~----~~~~~~~~~~~~~~gi~v~a~spl~ 215 (249)
..+.+.+++++... +.-++-.+-|+.- .....+++++|+++|+.|+.=-+..
T Consensus 148 ~~~~~d~~~l~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~ 207 (382)
T d1b5pa_ 148 EGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYE 207 (382)
T ss_dssp GTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cccCCCHHHHHHhCCCCCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEcccc
Confidence 22556665544321 2223334455432 2223889999999999999655444
|