Citrus Sinensis ID: 025745

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
MTTSSHLLRFCFFFLCLFGISSADGTQLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDETTGKGSCQTGDCAGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAPIGGGAGCGVAACEADLNICCPANLAVKKQGKLVACKSACVAAKSDRYCCTGEFANPRRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCRAPRYVITFCPPN
cccHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccEEEccccccccccccEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccHHHHHHcccccEEcccccccccEEEccccEEEEEEccc
cccHHHHHHHHHHHHHHHHHHccccEEEEEEccccccEcccEcccccccccccccEEcccccEEEEEcccccccEEEEEcccccccccccEEEEccccccEEEEcccccccccEEEEEEEccccccccEEEEEEEccccccEEEEEcccccccccccccccHHHHccHHHEEcccccEEEEcHHHHHHccccccccccccccccccccHHHHHHHHHccccEEEEcccccccEEcccccEEEEEcccc
mttsshllRFCFFFLCLfgissadgtqLILVNNcketiwpgilgtaghetpynggfvlcsgeqtvlevpekwsgriwprqgccfdettgkgscqtgdcaglrqckglggvppatLVEMTLGTQASALHYYdvslvdgfnvpvsmapigggagcGVAACeadlniccpanlavkkqgKLVACKSACvaaksdrycctgefanprrckptvfsHLFKaicpraysyayddstslktcrapryvitfcppn
MTTSSHLLRFCFFFLCLFGISSADGTQLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDETTGKGSCQTGDCAGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAPIGGGAGCGVAACEADLNICCPANLAVKKQGKLVACKSACVAAKSDRYCCTGefanprrckptVFSHLFKAICPRAYSyayddstslktcrapryvitfcppn
MTTSSHllrfcffflclfGISSADGTQLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDETTGKGSCQTGDCAGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMapigggagcgvaaceaDLNICCPANLAVKKQGKLVACKSACVAAKSDRYCCTGEFANPRRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCRAPRYVITFCPPN
*****HLLRFCFFFLCLFGISSADGTQLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDETTGKGSCQTGDCAGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAPIGGGAGCGVAACEADLNICCPANLAVKKQGKLVACKSACVAAKSDRYCCTGEFANPRRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCRAPRYVITFC***
*****HLLRFCFFFLCLFGISSADGTQLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDETTGKGSCQTGDCAGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAPIGGGAGCGVAACEADLNICCPANLAVKKQGKLVACKSACVAAKSDRYCCTGEFANPRRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCRAPRYVITFCPP*
MTTSSHLLRFCFFFLCLFGISSADGTQLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDETTGKGSCQTGDCAGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAPIGGGAGCGVAACEADLNICCPANLAVKKQGKLVACKSACVAAKSDRYCCTGEFANPRRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCRAPRYVITFCPPN
*TTSSHLLRFCFFFLCLFGISSADGTQLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDETTGKGSCQTGDCAGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAPIGGGAGCGVAACEADLNICCPANLAVKKQGKLVACKSACVAAKSDRYCCTGEFANPRRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCRAPRYVITFCPPN
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTTSSHLLRFCFFFLCLFGISSADGTQLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDETTGKGSCQTGDCAGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAPIGGGAGCGVAACEADLNICCPANLAVKKQGKLVACKSACVAAKSDRYCCTGEFANPRRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCRAPRYVITFCPPN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query248 2.2.26 [Sep-21-2011]
Q53MB8253 Thaumatin-like protein OS no no 0.891 0.873 0.663 4e-81
P50699243 Thaumatin-like protein OS no no 0.895 0.913 0.504 4e-61
Q9SMH2243 Thaumatin-like protein 1 N/A no 0.923 0.942 0.476 4e-53
P28493239 Pathogenesis-related prot no no 0.947 0.983 0.483 2e-52
Q9FSG7246 Thaumatin-like protein 1a N/A no 0.959 0.967 0.449 1e-50
O80327244 Thaumatin-like protein 1 N/A no 0.879 0.893 0.484 1e-49
P83332246 Thaumatin-like protein 1 N/A no 0.919 0.926 0.455 9e-49
P83336212 Thaumatin-like protein 1b N/A no 0.834 0.976 0.481 3e-47
Q41350252 Osmotin-like protein OS=S N/A no 0.870 0.857 0.439 5e-46
P50694245 Glucan endo-1,3-beta-gluc N/A no 0.927 0.938 0.429 4e-45
>sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 Back     alignment and function desciption
 Score =  301 bits (770), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 148/223 (66%), Positives = 181/223 (81%), Gaps = 2/223 (0%)

Query: 27  QLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDE 86
           QLI+VNNC E++WPG+LGTAGH TP +GGF L +GE+  LEVP  WSGR+WPR+GC FD 
Sbjct: 30  QLIMVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAGWSGRVWPRRGCSFD- 88

Query: 87  TTGKGSCQTGDCAGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAP 146
           + G+GSC TGDC G+ +C G  G  PAT+VEMTLGT ASA+H+YDVSLVDGFN PVSMA 
Sbjct: 89  SRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAA 148

Query: 147 IGGGAGCGVAACEADLNICCPANLAVK-KQGKLVACKSACVAAKSDRYCCTGEFANPRRC 205
           +GGG GCG AAC AD+N+CCP+ L V+ ++G++  C+SAC A   DRYCCTG++A+P  C
Sbjct: 149 VGGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSAC 208

Query: 206 KPTVFSHLFKAICPRAYSYAYDDSTSLKTCRAPRYVITFCPPN 248
           +PT+FSHLFKAICPRAYSYAYDD+TSL  C A RY+ITFCPP 
Sbjct: 209 RPTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYLITFCPPQ 251

Oryza sativa subsp. japonica (taxid: 39947)
>sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 Back     alignment and function description
>sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 Back     alignment and function description
>sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 Back     alignment and function description
>sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|Q41350|OLP1_SOLLC Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1 Back     alignment and function description
>sp|P50694|TLP_PRUAV Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query248
255566434265 Zeamatin precursor, putative [Ricinus co 0.987 0.924 0.775 1e-112
224109486234 predicted protein [Populus trichocarpa] 0.943 1.0 0.778 1e-103
225449436244 PREDICTED: thaumatin-like protein [Vitis 0.983 1.0 0.75 1e-101
359481759242 PREDICTED: thaumatin-like protein-like [ 0.967 0.991 0.680 4e-96
224090761223 predicted protein [Populus trichocarpa] 0.899 1.0 0.714 6e-94
297740339 943 unnamed protein product [Vitis vinifera] 0.935 0.246 0.673 2e-93
118486697249 unknown [Populus trichocarpa] 0.907 0.903 0.699 3e-93
255581498248 Zeamatin precursor, putative [Ricinus co 0.895 0.895 0.699 6e-92
356537936251 PREDICTED: thaumatin-like protein-like [ 0.987 0.976 0.696 2e-89
358249146245 uncharacterized protein LOC100799604 pre 0.979 0.991 0.659 7e-88
>gi|255566434|ref|XP_002524202.1| Zeamatin precursor, putative [Ricinus communis] gi|223536479|gb|EEF38126.1| Zeamatin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/249 (77%), Positives = 220/249 (88%), Gaps = 4/249 (1%)

Query: 1   MTTSSHLLRFCFFFLC-LFGISSADGTQLILVNNCKETIWPGILGTAGHETPYNGGFVLC 59
           M TSSH L   FFFL  L  +S  DGTQ I+VNNC+E+IWPGILGTAGHETP  GGF L 
Sbjct: 20  MLTSSHFL---FFFLSTLISLSFTDGTQFIIVNNCQESIWPGILGTAGHETPREGGFHLA 76

Query: 60  SGEQTVLEVPEKWSGRIWPRQGCCFDETTGKGSCQTGDCAGLRQCKGLGGVPPATLVEMT 119
           +GEQTVLE+P++WSGRIWPRQGCCFDE TGKGSCQTGDCAGL QC+GLGGVPPA++VEMT
Sbjct: 77  TGEQTVLELPDRWSGRIWPRQGCCFDEITGKGSCQTGDCAGLLQCRGLGGVPPASIVEMT 136

Query: 120 LGTQASALHYYDVSLVDGFNVPVSMAPIGGGAGCGVAACEADLNICCPANLAVKKQGKLV 179
           LGT  S LHYYDVSLVDGFNVPVSM PIGGG GCGVAACEA+LN+CCP  L VK+QGK+V
Sbjct: 137 LGTLNSDLHYYDVSLVDGFNVPVSMTPIGGGPGCGVAACEANLNVCCPEALVVKRQGKVV 196

Query: 180 ACKSACVAAKSDRYCCTGEFANPRRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCRAPR 239
            CKSAC+AAKSDRYCCTG+FA+P+ C+PT+F+HLFKAICPRAYS+AYDD+++LKTC+AP 
Sbjct: 197 GCKSACLAAKSDRYCCTGQFADPKSCQPTIFAHLFKAICPRAYSFAYDDASALKTCKAPG 256

Query: 240 YVITFCPPN 248
           YVITFCPPN
Sbjct: 257 YVITFCPPN 265

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224109486|ref|XP_002315212.1| predicted protein [Populus trichocarpa] gi|222864252|gb|EEF01383.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225449436|ref|XP_002278079.1| PREDICTED: thaumatin-like protein [Vitis vinifera] gi|296086203|emb|CBI31644.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359481759|ref|XP_003632671.1| PREDICTED: thaumatin-like protein-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224090761|ref|XP_002309073.1| predicted protein [Populus trichocarpa] gi|222855049|gb|EEE92596.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297740339|emb|CBI30521.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|118486697|gb|ABK95185.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255581498|ref|XP_002531555.1| Zeamatin precursor, putative [Ricinus communis] gi|223528816|gb|EEF30821.1| Zeamatin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356537936|ref|XP_003537462.1| PREDICTED: thaumatin-like protein-like [Glycine max] Back     alignment and taxonomy information
>gi|358249146|ref|NP_001240256.1| uncharacterized protein LOC100799604 precursor [Glycine max] gi|255641320|gb|ACU20937.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query248
TAIR|locus:2185218294 AT5G02140 "AT5G02140" [Arabido 0.899 0.758 0.653 3.6e-82
TAIR|locus:2027864264 AT1G73620 [Arabidopsis thalian 0.899 0.844 0.489 6.6e-58
TAIR|locus:2194344244 ATLP-1 [Arabidopsis thaliana ( 0.891 0.905 0.495 1.4e-57
TAIR|locus:2121189345 AT4G38660 "AT4G38660" [Arabido 0.870 0.626 0.479 1.6e-54
TAIR|locus:2027161246 TLP-3 "AT1G75030" [Arabidopsis 0.899 0.906 0.458 2.1e-52
TAIR|locus:2153929 420 AT5G24620 [Arabidopsis thalian 0.875 0.516 0.457 1.2e-51
TAIR|locus:2203236356 AT1G77700 "AT1G77700" [Arabido 0.834 0.581 0.486 1.5e-51
TAIR|locus:2005549330 AT1G75800 "AT1G75800" [Arabido 0.915 0.687 0.459 3.1e-51
TAIR|locus:2135882260 TLP1 "AT4G24180" [Arabidopsis 0.891 0.85 0.447 4e-51
TAIR|locus:2037227246 AT1G75050 "AT1G75050" [Arabido 0.903 0.910 0.456 8.3e-51
TAIR|locus:2185218 AT5G02140 "AT5G02140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 147/225 (65%), Positives = 179/225 (79%)

Query:    24 DGTQLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCC 83
             DG QLI+VNNC+E+IWPGILG  G  TP NGGF + SGE+T+++VP+KWSGRIW RQGC 
Sbjct:    19 DGAQLIIVNNCQESIWPGILGGGGQITPRNGGFHMGSGEETIIDVPDKWSGRIWGRQGCT 78

Query:    84 FDETTGKGSCQTGDCA-GLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPV 142
             F++  GKGSCQTGDC  G   C+G GGVPPAT+VEMTLG+ +S LH+YDVSLVDGFN+PV
Sbjct:    79 FNQN-GKGSCQTGDCNDGSINCQGTGGVPPATVVEMTLGSSSSPLHFYDVSLVDGFNLPV 137

Query:   143 SMXXXXXXXXXXXXXXXXDLNICCPANLAVKKQGKLVACKSACVAAKSDRYCCTGEFANP 202
             SM                +LNICCP+ L VK+ GK+V CKSAC+A +S +YCCTGE+ANP
Sbjct:   138 SMKPIGGGVGCGVAACEVNLNICCPSALEVKRDGKVVGCKSACLAMQSAKYCCTGEYANP 197

Query:   203 RRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCRAPRYVITFCPP 247
             + CKPT+F++LFKAICP+AYSYA+DDS+SL  CRA RYVITFCPP
Sbjct:   198 QACKPTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPP 242
GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0051707 "response to other organism" evidence=ISS
TAIR|locus:2027864 AT1G73620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194344 ATLP-1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153929 AT5G24620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005549 AT1G75800 "AT1G75800" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135882 TLP1 "AT4G24180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query248
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 1e-103
pfam00314212 pfam00314, Thaumatin, Thaumatin family 3e-96
smart00205218 smart00205, THN, Thaumatin family 1e-76
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 2e-40
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 5e-36
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 3e-30
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 4e-30
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information 
 Score =  297 bits (763), Expect = e-103
 Identities = 123/221 (55%), Positives = 143/221 (64%), Gaps = 4/221 (1%)

Query: 27  QLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDE 86
              + N C  T+WPGILG AGH     GGF L  G+   ++ P  WSGR W R GC FD 
Sbjct: 1   TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFD- 59

Query: 87  TTGKGSCQTGDCAGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAP 146
           ++GKGSC TGDC G  +C G GG PPATL E TLG  +    +YDVSLVDG+N+PVS+ P
Sbjct: 60  SSGKGSCATGDCGGGLECNGAGGAPPATLAEFTLGG-SGGQDFYDVSLVDGYNLPVSITP 118

Query: 147 IGGGAGCGVAACEADLNICCPANLAVKK-QGKLVACKSACVAAKSDRYCCTGEFANPRRC 205
            GG  GC  A C ADLN  CPA L VK   G++VACKSAC+A  +D YCC G +  P  C
Sbjct: 119 QGGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLAFNTDEYCCRGAYGTPETC 178

Query: 206 KPTVFSHLFKAICPRAYSYAYDDSTSLKTCR-APRYVITFC 245
           KPT +S LFK  CP+AYSYAYDD TS  TC     YVITFC
Sbjct: 179 KPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219

This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219
>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 248
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 97.64
cd09216 353 GH64-LPHase-like glycoside hydrolase family 64: la 95.49
cd09214319 GH64-like glycosyl hydrolase 64 family. This famil 95.36
cd09220 369 GH64-GluB-like glycoside hydrolase family 64: beta 91.38
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information 
Probab=100.00  E-value=2e-85  Score=575.90  Aligned_cols=217  Identities=57%  Similarity=1.160  Sum_probs=209.0

Q ss_pred             EEEEEeCCCCcccceeecCCCCCCCCCCceEecCCCeEEEEcCCCCceeeeeccccccCCCCCcccccCCCCCCccccCC
Q 025745           27 QLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDETTGKGSCQTGDCAGLRQCKG  106 (248)
Q Consensus        27 t~ti~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~~p~~WsGriwaRtgCs~d~~~g~~~C~TGdCgg~~~C~g  106 (248)
                      +|||+|||+||||||+++++|++++..+||+|+||++++|++|++|+|||||||+|++| +.|+++|+||||+|+++|+|
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~-~~g~~~C~TGDCgg~l~C~g   79 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFD-SSGKGSCATGDCGGGLECNG   79 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCcceeeeeccCCCCC-CCCccccccCCCCCeeecCC
Confidence            59999999999999999999999998999999999999999999999999999999999 88999999999999999999


Q ss_pred             CCCCCCceeEEEEecCCCCCcceeeeeccCccccCceeccCCCCCCcCCccccccccccCCCCccccc-CCeeeccccch
Q 025745          107 LGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAPIGGGAGCGVAACEADLNICCPANLAVKK-QGKLVACKSAC  185 (248)
Q Consensus       107 ~g~~ppaTlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~g~~~C~~~~C~~dl~~~CP~~l~v~~-~g~vv~C~S~C  185 (248)
                      .+++||+|||||+|++. +++|||||||||||||||+|+|+++.+.|+.++|.+|||..||.||||++ +|+||||||||
T Consensus        80 ~~g~pP~TlaEftl~~~-~~~d~YdvSlVdGfNlP~~i~P~~~~~~C~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC  158 (219)
T cd09218          80 AGGAPPATLAEFTLGGS-GGQDFYDVSLVDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSAC  158 (219)
T ss_pred             CCCCCCceeEEEEeccC-CCCcceeeeeeccccCCEEEEecCCCCCCCCCcccCcccccCCHHHeeccCCCcEeeecCHH
Confidence            88889999999999886 67899999999999999999998766789999999999999999999964 68999999999


Q ss_pred             hhcCCCCcccCCCCCCCCCCCCchhhHHHHhhCCCccccccCCCCCceeecC-CCeEEEec
Q 025745          186 VAAKSDRYCCTGEFANPRRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCRA-PRYVITFC  245 (248)
Q Consensus       186 ~~~~~~~~CC~g~~~~p~~C~~t~ys~~fK~~CP~AYsya~DD~tstftC~~-~~y~ItFC  245 (248)
                      .+|++|||||+|+|.+|++|+|+.||++||++||+||+|||||++|+|+|++ ++|+||||
T Consensus       159 ~~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         159 LAFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             HhhCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            9999999999999999999999999999999999999999999999999997 99999999

This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele
>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information
>cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like Back     alignment and domain information
>cd09214 GH64-like glycosyl hydrolase 64 family Back     alignment and domain information
>cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query248
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 5e-45
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 6e-40
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 1e-33
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 2e-30
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 3e-29
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 3e-28
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 4e-28
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 3e-27
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 2e-26
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 2e-26
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 2e-26
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 2e-26
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 2e-26
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 3e-26
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 2e-25
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 7e-10
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure 
Iteration: 1

 Score =  177 bits (449), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/225 (44%), Positives = 125/225 (55%), Gaps = 9/225 (4%)
Query: 27  QLILVNNCKETIWPGILGTAGHETPYNG--GFVLCSGEQTVLEVPEKWSGRIWPRQGCCF 84
           ++   NNC  T+WPG L   G + P     GF L S     ++ P  WSGR W R  C  
Sbjct: 2   KITFTNNCPNTVWPGTL--TGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCST 59
Query: 85  DETTGKGSCQTGDC-AGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVS 143
           D   GK +C+T DC +G   C G G VPPATLVE+T+        YYDVSLVDGFN+P+S
Sbjct: 60  D-AAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANG-GQDYYDVSLVDGFNLPMS 117
Query: 144 MXXXXXXXXXXXXXXXXDLNICCPANLAVKK-QGKLVACKSACVAAKSDRYCCTGEFANP 202
           +                ++N  CPA L VK   G +++CKSAC+A    +YCCT     P
Sbjct: 118 VAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTP 177
Query: 203 RRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCR-APRYVITFCP 246
             C PT +S +F+  CP+AYSYAYDD  S  TC   P YVITFCP
Sbjct: 178 ETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 222
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query248
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 5e-63
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 3e-53
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 1e-49
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 9e-45
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 2e-43
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 4e-32
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
 Score =  195 bits (497), Expect = 5e-63
 Identities = 98/222 (44%), Positives = 120/222 (54%), Gaps = 5/222 (2%)

Query: 28  LILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDET 87
           +   NNC   +WPG L +         GF L S     L+ P  W+GR W R GC  D  
Sbjct: 3   ISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTD-A 61

Query: 88  TGKGSCQTGDC-AGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAP 146
           +GK  C T DC +G   C G G +PPATL E  +        +YDVSLVDGFN+P+S+ P
Sbjct: 62  SGKFVCATADCASGQVMCNGNGAIPPATLAEFNIP-AGGGQDFYDVSLVDGFNLPMSVTP 120

Query: 147 IGGGAGCGVAACEADLNICCPANLAVKKQ-GKLVACKSACVAAKSDRYCCTGEFANPRRC 205
            GG   C  A+C A++N  CP+ L  K   G +VAC SACV   + +YCCT     P  C
Sbjct: 121 QGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETC 180

Query: 206 KPTVFSHLFKAICPRAYSYAYDDSTSLKTCR-APRYVITFCP 246
            PT +S +F   CP AYSYAYDD     TC   P Y ITFCP
Sbjct: 181 PPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query248
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A 367 Laminaripentaose-producing beta-1,3-guluase (lphas 94.25
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
Probab=100.00  E-value=3.6e-89  Score=599.64  Aligned_cols=219  Identities=45%  Similarity=0.936  Sum_probs=211.3

Q ss_pred             eEEEEEeCCCCcccceeecCCCCCCCCCCceEecCCCeEEEEcCCCCceeeeeccccccCCCCCcccccCCCCC-Ccccc
Q 025745           26 TQLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWSGRIWPRQGCCFDETTGKGSCQTGDCA-GLRQC  104 (248)
Q Consensus        26 ~t~ti~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~~p~~WsGriwaRtgCs~d~~~g~~~C~TGdCg-g~~~C  104 (248)
                      ++|||+|+|+|||||++++++|++++..+|++|++|++++|.+|++|+|||||||+|++| ++|+++|+||||+ |+++|
T Consensus         1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d-~~g~~~C~TGdCgsg~l~C   79 (222)
T 2ahn_A            1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTD-ASGKFVCATADCASGQVMC   79 (222)
T ss_dssp             CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEEC-TTSCEEEEESCCCSSSSSC
T ss_pred             CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCC-CCCCcccccCCccCCceec
Confidence            589999999999999999999999999999999999999999999999999999999999 8899999999999 99999


Q ss_pred             CCCCCCCCceeEEEEecCCCCCcceeeeeccCccccCceeccCCCCCCcCCccccccccccCCCCccccc-CCeeecccc
Q 025745          105 KGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAPIGGGAGCGVAACEADLNICCPANLAVKK-QGKLVACKS  183 (248)
Q Consensus       105 ~g~g~~ppaTlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~g~~~C~~~~C~~dl~~~CP~~l~v~~-~g~vv~C~S  183 (248)
                      ++.++.||+|||||+|++. +++|||||||||||||||+|+|+++++.|+.++|.+|||..||.|||+++ +|+||||||
T Consensus        80 ~g~~g~pPaTLaEftl~~~-~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~s  158 (222)
T 2ahn_A           80 NGNGAIPPATLAEFNIPAG-GGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLS  158 (222)
T ss_dssp             TTCCCCSSCCEEEEEECST-TCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECC
T ss_pred             CCCCCCCCceeeeEEecCC-CCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEecccc
Confidence            9988899999999999986 67999999999999999999998866789999999999999999999964 789999999


Q ss_pred             chhhcCCCCcccCCCCCCCCCCCCchhhHHHHhhCCCccccccCCCCCceeecC-CCeEEEecC
Q 025745          184 ACVAAKSDRYCCTGEFANPRRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCRA-PRYVITFCP  246 (248)
Q Consensus       184 ~C~~~~~~~~CC~g~~~~p~~C~~t~ys~~fK~~CP~AYsya~DD~tstftC~~-~~y~ItFCP  246 (248)
                      +|.+|++|||||+|+|.+|++|+|+.|+++||++||+||||||||++|||+|++ ++|+|||||
T Consensus       159 aC~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP  222 (222)
T 2ahn_A          159 ACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP  222 (222)
T ss_dssp             HHHHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred             cccccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence            999999999999999999999999999999999999999999999999999998 799999998
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 248
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 1e-64
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 2e-62
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 4e-60
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Zeamatin
species: Maize (Zea mays) [TaxId: 4577]

 Score =  198 bits (504), Expect = 1e-64
 Identities = 94/219 (42%), Positives = 114/219 (52%), Gaps = 19/219 (8%)

Query: 30  LVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVP-EKWSGRIWPRQGCCFDETT 88
           +VN C  T+W   +       P  GG  L  GE   +  P    + RIW R GC FD  +
Sbjct: 5   VVNQCPFTVWAASV-------PVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFD-AS 56

Query: 89  GKGSCQTGDCAGLRQCKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAPIG 148
           G+GSC+TGDC G+ QC G  G  P TL E  L  Q + L ++D+SL+DGFNVP+S  P G
Sbjct: 57  GRGSCRTGDCGGVLQCTG-YGRAPNTLAEYALK-QFNNLDFFDISLIDGFNVPMSFLPDG 114

Query: 149 GGAGCGVAACEADLNICCPANLAVKKQGKLVACKSACVAAKSDRYCCTGEFANPRRCKPT 208
           G        C  D+N  CPA L          C +AC   K D YCC G  AN   C PT
Sbjct: 115 GSGCSRGPRCAVDVNARCPAELRQD-----GVCNNACPVFKKDEYCCVGSAAND--CHPT 167

Query: 209 VFSHLFKAICPRAYSYAYDDSTSLKTCRAP-RYVITFCP 246
            +S  FK  CP AYSY  DD+TS  TC A   Y + FCP
Sbjct: 168 NYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query248
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=100.00  E-value=5.8e-80  Score=534.58  Aligned_cols=203  Identities=41%  Similarity=0.819  Sum_probs=189.7

Q ss_pred             ceEEEEEeCCCCcccceeecCCCCCCCCCCceEecCCCeEEEEcCCCCc-eeeeeccccccCCCCCcccccCCCCCCccc
Q 025745           25 GTQLILVNNCKETIWPGILGTAGHETPYNGGFVLCSGEQTVLEVPEKWS-GRIWPRQGCCFDETTGKGSCQTGDCAGLRQ  103 (248)
Q Consensus        25 ~~t~ti~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~~p~~Ws-GriwaRtgCs~d~~~g~~~C~TGdCgg~~~  103 (248)
                      +++|||+|||+|||||+++++       .+|++|++|++++|.+|++|. |||||||+|++| +.|+++|+||||+|.++
T Consensus         1 ~~~fti~N~C~~TVWp~~~p~-------~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d-~~G~~~C~TGdCgg~l~   72 (208)
T d1auna_           1 SGVFEVHNNCPYTVWAAATPV-------GGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFD-GAGRGWCQTGDCGGVLE   72 (208)
T ss_dssp             CCEEEEEECSSSCEEEEEETT-------TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEEC-TTSBEEEEESCCTTBSS
T ss_pred             CCEEEEEeCCCCCcccccccC-------CCCcccCCCCceEEECCCCCcccceeecCCCCcC-CCCccceeccCcCCeEe
Confidence            468999999999999999875       358999999999999999885 999999999999 88999999999999999


Q ss_pred             cCCCCCCCCceeEEEEecCCCCCcceeeeeccCccccCceeccCCC-CCCcCCccccccccccCCCCcccccCCeeeccc
Q 025745          104 CKGLGGVPPATLVEMTLGTQASALHYYDVSLVDGFNVPVSMAPIGG-GAGCGVAACEADLNICCPANLAVKKQGKLVACK  182 (248)
Q Consensus       104 C~g~g~~ppaTlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~g-~~~C~~~~C~~dl~~~CP~~l~v~~~g~vv~C~  182 (248)
                      |++. +.||+|||||+|+.. +++|||||||||||||||+|+|+++ .+.|+.++|.+|||..||.|||+.     .||+
T Consensus        73 C~~~-G~pP~TlaEftl~~~-~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~-----~~C~  145 (208)
T d1auna_          73 CKGW-GKPPNTLAEYALNQF-SNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVP-----GGCN  145 (208)
T ss_dssp             CSSC-CCSSCCEEEEEEEEG-GGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEET-----TEEC
T ss_pred             cCCC-CCCCcceEEEEeccC-CCcceeccccccccccceEEeccCCCCCCcCcccccCCccccCCHhhccC-----CCCc
Confidence            9987 569999999999986 7899999999999999999999874 568999999999999999999993     3899


Q ss_pred             cchhhcCCCCcccCCCCCCCCCCCCchhhHHHHhhCCCccccccCCCCCceeecC--CCeEEEecCC
Q 025745          183 SACVAAKSDRYCCTGEFANPRRCKPTVFSHLFKAICPRAYSYAYDDSTSLKTCRA--PRYVITFCPP  247 (248)
Q Consensus       183 S~C~~~~~~~~CC~g~~~~p~~C~~t~ys~~fK~~CP~AYsya~DD~tstftC~~--~~y~ItFCP~  247 (248)
                      |+|.+|+.|||||+     +++|+|++|+++||++||+||||||||++|||+|++  ++|+|||||.
T Consensus       146 saC~~~~~~~~CCt-----~~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP~  207 (208)
T d1auna_         146 NPCTTFGGQQYCCT-----QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPY  207 (208)
T ss_dssp             CHHHHTCSHHHHCT-----TSCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTT
T ss_pred             cceeecCCCccccC-----CCcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCCC
Confidence            99999999999997     468999999999999999999999999999999986  7999999996
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure