Citrus Sinensis ID: 025810

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------
Protein Sequence
MGLCQYYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQLA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccccccccccccccccccccEEEEcccccccccccccEEEEEEccccccccccEEEEEEEccccccccccccHHHHHHHccccccHHHHcccEEEEEEEEEccccccccEEEEEccccccccEEEEEEEEEccccccEEEEEEEccccccEEccccccccccccccccccccEEEEEEEccccEEEEEccccccccccccEEEcccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHcccccccccccEEEEEccccccccccccccccccccccccccHHHHHHHcccccccccEEEEEEccccccccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccEEEEEEcccccccEEEEEEEEcccccccEEEEEEEEccccccEEccccccccEEEcccccccccEEEEEEcccccEEEEEccccccccccccEEEEcEEEc
Coil and Loop (DISEMBL)
MGLCQYYLLSVVLLLPalcysqftftssrasfygspdglgtpagacgfgaygktvndanVAGVSRlwnngtgcgacyqvrcnvpevctdyGVYVVVTdygegddtdfvlsprafgrmalvdkseelytfgvvdveflrvpcrfrgynlkfkvhenskypqYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGavfdisnpppgainLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQLA
Flexible Loop (DISEMBL)
MGLCQYYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQLA
Low Complexity Region (SEG)
MGlcqyyllsvvlllpalcySQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVPEvctdygvyvvvtdygegddtdFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQLA
Disordered region (IsUnstruct)
**LCQYYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESA****
Disordered Region (DISOPRED)
*GLCQYYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQLA
Disordered Region (DISEMBL)
MGLCQYYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQLA
Disordered Region (DISPRO)
MGLCQYYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQLA
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLCQYYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQLA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	247	2.2.26 [Sep-21-2011]
O23547	250	Expansin-like B1 OS=Arabi	yes	no	0.967	0.956	0.589	7e-83
Q850K7	256	Expansin-like B1 OS=Oryza	yes	no	0.963	0.929	0.407	1e-47
Q10S70	279	Expansin-like A1 OS=Oryza	yes	no	0.878	0.777	0.391	5e-39
Q9SVE5	265	Expansin-like A2 OS=Arabi	no	no	0.753	0.701	0.388	1e-35
Q9LZT4	265	Expansin-like A1 OS=Arabi	no	no	0.753	0.701	0.380	1e-35
Q9LZT5	263	Expansin-like A3 OS=Arabi	no	no	0.753	0.707	0.388	7e-35
Q8H7T4	267	Expansin-B10 OS=Oryza sat	no	no	0.866	0.801	0.358	2e-32
Q8H274	276	Expansin-like A3 OS=Oryza	no	no	0.757	0.677	0.377	4e-32
Q7XCL0	275	Expansin-like A2 OS=Oryza	no	no	0.882	0.792	0.375	5e-32
Q40638	267	Expansin-B1 OS=Oryza sati	no	no	0.854	0.790	0.346	1e-31

>sp|O23547|EXLB1_ARATH Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2

 Score =  306 bits (785), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 142/241 (58%), Positives = 179/241 (74%), Gaps = 2/241 (0%)

Query: 8   LLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS-RL 66
            + V++LLP LC S   F +SRA++YGSPD    P G CG+G +G+ +N+  V+GVS RL
Sbjct: 11  FVQVIVLLPLLCLSD-DFVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRL 69

Query: 67  WNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEEL 126
           WNNGTGCGACYQVRC +P  C++ GVYVV TD GEGD TDF+LSP+A+GRMA      +L
Sbjct: 70  WNNGTGCGACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTENQL 129

Query: 127 YTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCK 186
           Y+FGVV+VE+ R+PCR+ GYNL +K+HE S  P YLA+ +LYVGG ND+LAVE+WQEDCK
Sbjct: 130 YSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCK 189

Query: 187 DWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQL 246
           +W  MRR FGAV D+ NPP G + LRF V GSAG+ W+ + NAIP  W AG  Y+S I L
Sbjct: 190 EWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAGATYDSNILL 249

Query: 247 A 247
            
Sbjct: 250 T 250

Arabidopsis thaliana (taxid: 3702)

>sp|Q850K7|EXLB1_ORYSJ Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2

 Score =  189 bits (481), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 5/243 (2%)

Query: 8   LLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLW 67
           +LS++L L +   +   FT SRA++Y + D  GT  GAC +GA+G T+N+ +V+  + L+
Sbjct: 12  ILSLILFL-SKATADANFTVSRAAYYPNSDIKGTENGACEYGAFGATLNNGDVSASASLY 70

Query: 68  NNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMAL-VDKSEEL 126
            +G GCGACYQVRC  P  C+  GV +V+TD G  D TDF+LS  AF RMA   D    L
Sbjct: 71  RDGVGCGACYQVRCTNPYYCSPNGVTIVITDSGASDGTDFILSQHAFTRMAQSTDAGTAL 130

Query: 127 YTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCK 186
            T GVV +E+ RV C +   N+ FK+ E+S +P YL   + Y  G  D++AV++ +    
Sbjct: 131 LTLGVVGIEYRRVSCTYPNKNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQLCETVNL 190

Query: 187 DWVAMRRAFGAVFDISNPPPGAINLRFQVSGSA---GLTWVVANNAIPQIWKAGVAYESA 243
               + R  GAV+   +PP G +++R   S  A   G TW+V  N +PQ W AG  Y+S 
Sbjct: 191 TCQLLSRTHGAVWAAVSPPSGPLSIRMLFSSGAPRGGDTWLVPTNIVPQNWTAGATYDSG 250

Query: 244 IQL 246
           +Q+
Sbjct: 251 VQV 253

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q10S70|EXLA1_ORYSJ Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1

 Score =  161 bits (407), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 122/222 (54%), Gaps = 5/222 (2%)

Query: 28  SRASFYGSPDGLGTPAGACGFGAYGKTVNDAN--VAGVSRLWNNGTGCGACYQVRCNVPE 85
           SRA++Y S   L   AG+CG+G    T N      A    L+  G GCGACYQVRC   +
Sbjct: 43  SRAAYYTS--SLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDKK 100

Query: 86  VCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRG 145
           +C++ G  VVVTD    + T  VLS  AF  MA    +  L     VDVE+ RVPC +R 
Sbjct: 101 LCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEYRH 160

Query: 146 YNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPP 205
            +L  +V E S+ P  L +S LY GGQ D++AV++ Q     W  M R  G  + ++N P
Sbjct: 161 RSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAP 220

Query: 206 PGAINLRFQVSGSAGLTWVVANNAI-PQIWKAGVAYESAIQL 246
           PG + +R  V+G     WV A+  + P+ W+AG  Y++ +Q+
Sbjct: 221 PGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDTGVQI 262

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SVE5|EXLA2_ARATH Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1

 Score =  149 bits (377), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 111/188 (59%), Gaps = 2/188 (1%)

Query: 61  AGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMA-- 118
           A +  ++ +G+GCGAC+QVRC  P +C+  G  V+VTD  + + TD VLS RAF  MA  
Sbjct: 61  AALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKP 120

Query: 119 LVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAV 178
           +V    +L   G+VD+E+ RVPC +    +  +V E+SK P YLA+ +LY GGQ +V+A+
Sbjct: 121 VVGADRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAI 180

Query: 179 EMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGV 238
            + Q     W  M R+ GAV+     P GA+  RF V+       V +   +P  W+AG 
Sbjct: 181 YIAQVGSSHWSYMTRSHGAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGK 240

Query: 239 AYESAIQL 246
           +Y++ +Q+
Sbjct: 241 SYDAGVQI 248

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZT4|EXLA1_ARATH Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1

 Score =  149 bits (377), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 114/189 (60%), Gaps = 3/189 (1%)

Query: 61  AGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMA-- 118
           A +  ++ +G GCGAC+QVRC  P++C+  G  V++TD  + + TD VLS RAF  MA  
Sbjct: 60  AAIPSIYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKP 119

Query: 119 LVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAV 178
           +V   ++L   G+VD+E+ RVPC +   N+  +V E SK P YL + +LY GGQ +V+++
Sbjct: 120 IVGADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSI 179

Query: 179 EMWQ-EDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAG 237
           ++ Q     +W  M R+ GAV+     P GAI  RF V+G      + + + +P  W+AG
Sbjct: 180 DIAQVGSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAG 239

Query: 238 VAYESAIQL 246
             Y++ +Q+
Sbjct: 240 KIYDAGVQI 248

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZT5|EXLA3_ARATH Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1

 Score =  147 bits (371), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 107/188 (56%), Gaps = 2/188 (1%)

Query: 61  AGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMA-- 118
           A +  ++ +G GCGAC+QVRC  P++C   G  V+VTD    + TD VLS RAF  MA  
Sbjct: 60  AAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKP 119

Query: 119 LVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAV 178
           +V   + L   G+VDVE+ RVPC +   NL  +V E SK P YLA+ +LY GGQ +V+ +
Sbjct: 120 VVGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGI 179

Query: 179 EMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGV 238
           ++       W  M R+ GAV+     P GA+  +F V+G      V +   +P  W +G 
Sbjct: 180 DIAPVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGR 239

Query: 239 AYESAIQL 246
            Y++ +Q+
Sbjct: 240 IYDAGVQI 247

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H7T4|EXB10_ORYSJ Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1

 Score =  139 bits (350), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 126/234 (53%), Gaps = 20/234 (8%)

Query: 25  FTSSRASFYGSPDGLGTP--AGACGFGAYGKTVNDA-----NVAGVSRLWNNGTGCGACY 77
           +  +R ++YG P G G     GACG+    K ++ A     N  G   ++ +G GCG+C+
Sbjct: 41  WLEARGTWYGKPKGAGPDDNGGACGY----KDIDKAPFLGMNSCGNDPIFKDGKGCGSCF 96

Query: 78  QVRCNVPEVCTDYGVYVVVTDYGEGDDT--DFVLSPRAFGRMALVDKSEELYTFGVVDVE 135
           +V+C+ PE C+D  V + +TD          F LS  AFG MA   K EEL   G++D++
Sbjct: 97  EVKCSKPEACSDKPVIIHITDMNTEPIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQ 156

Query: 136 FLRVPCRFRGY-NLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRA 194
           F RV C++ G   + F V + S  P Y AV + YVGG  DV+ VE+ ++  ++W  +  +
Sbjct: 157 FRRVRCKYPGETKVTFHVEKGSN-PNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNES 215

Query: 195 FGAVFDISNPPP--GAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQL 246
           +GA++ I  P P  G  +LR        L   VAN+ IP  WKA   Y+S IQ+
Sbjct: 216 WGAIWRIDTPKPLKGPFSLRVTTESDQKL---VANDVIPDNWKANALYKSEIQV 266

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8H274|EXLA3_ORYSJ Expansin-like A3 OS=Oryza sativa subsp. japonica GN=EXLA3 PE=2 SV=1

 Score =  138 bits (347), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 102/188 (54%), Gaps = 1/188 (0%)

Query: 61  AGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALV 120
           AG  R    G GCG C+Q+RC   EVC++ GV VV+TD+   + TDF+L   AF  +A  
Sbjct: 73  AGGPRQHRGGLGCGRCFQMRCRNAEVCSNAGVRVVLTDFHRSNSTDFLLGGPAFAGLAKP 132

Query: 121 DKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEM 180
             + +L     + VE+ R+PC ++  NL   V E SK P  L +  LY GGQ D+LAV++
Sbjct: 133 GMAHKLKKLDALSVEYRRIPCDYKDKNLSILVEEQSKRPNNLVIKFLYQGGQTDILAVDV 192

Query: 181 WQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAI-PQIWKAGVA 239
            Q    DW  M R +G V+ I   P G +  R  V+G     WV A+  + P  W+ G  
Sbjct: 193 AQVGSSDWRFMTRVYGPVWSIDRAPNGPLQFRAVVTGGYDGKWVWADREVLPANWQPGQV 252

Query: 240 YESAIQLA 247
           Y++  ++A
Sbjct: 253 YDTGARIA 260

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XCL0|EXLA2_ORYSJ Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1

 Score =  138 bits (347), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 124/224 (55%), Gaps = 6/224 (2%)

Query: 28  SRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS-RLWNNGTGCGACYQVRCNVPEV 86
           S+A F  S   L   AG+CG+G+   + N  ++A  S  L+  G GCGAC+QVRC   ++
Sbjct: 38  SKAGFRDSSIALN--AGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKL 95

Query: 87  CTDYGVYVVVTDYGEGDD-TDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFR- 144
           C+  G  VVVTD     + TD VLS  A+  MA    + +L T   VDVE+ RVPC +  
Sbjct: 96  CSTAGAKVVVTDEARSTNRTDLVLSAAAYAAMARPGMAAQLRTRRAVDVEYKRVPCEYAA 155

Query: 145 GYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNP 204
           G NL  +V E S+ P+ L++  LY GGQ D++AV++      +W  M R +G  +  +  
Sbjct: 156 GRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAWSTAQA 215

Query: 205 PPGAINLRFQVSGSAGLTWVVANNAI-PQIWKAGVAYESAIQLA 247
           P G +  R  V+G     WV A+  + P+ W AG  Y++ +Q+A
Sbjct: 216 PAGPLQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVYDAGVQIA 259

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q40638|EXPB1_ORYSJ Expansin-B1 OS=Oryza sativa subsp. japonica GN=EXPB1a PE=1 SV=2

 Score =  137 bits (344), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 127/231 (54%), Gaps = 20/231 (8%)

Query: 27  SSRASFYGSPDGLGTP--AGACGFGAYGKTVNDA-----NVAGVSRLWNNGTGCGACYQV 79
            ++A++YG+P G G     GACG+    K V+ A     N  G   ++ +G GCG+C+++
Sbjct: 43  EAKATWYGAPKGAGPKDNGGACGY----KDVDKAPFLGMNSCGNDPIFKDGKGCGSCFEI 98

Query: 80  RCNVPEVCTDYGVYVVVTDYGEGDDT--DFVLSPRAFGRMALVDKSEELYTFGVVDVEFL 137
           +C+ PE C+D    + VTD  +       F LS  AFG MA   K EEL   G++D +F 
Sbjct: 99  KCSKPEACSDKPALIHVTDMNDEPIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFR 158

Query: 138 RVPCRFRGYNLKFKVH-ENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFG 196
           RV C++   + K   H E +  P YLA+ + YV G  DV+ VE+ ++  ++W A++ ++G
Sbjct: 159 RVKCKYPA-DTKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWG 217

Query: 197 AVFDISNPPP--GAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQ 245
           A++ I  P P  G  ++R    G      ++A +AIP  WKA   Y+S +Q
Sbjct: 218 AIWRIDTPKPLKGPFSVRVTTEGGEK---IIAEDAIPDGWKADSVYKSNVQ 265

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	247
255580799	247	Major pollen allergen Ory s 1 precursor,	0.991	0.991	0.668	5e-95
224126451	236	hypothetical protein POPTRDRAFT_783792 [	0.943	0.987	0.689	2e-92
224138720	251	hypothetical protein POPTRDRAFT_589918 [	0.971	0.956	0.662	2e-90
255580801	248	Major pollen allergen Ory s 1 precursor,	0.963	0.959	0.652	4e-89
356563391	251	PREDICTED: expansin-like B1-like [Glycin	0.967	0.952	0.641	6e-87
356497093	251	PREDICTED: expansin-like B1-like [Glycin	0.983	0.968	0.618	3e-85
357482205	251	Expansin-like protein [Medicago truncatu	0.979	0.964	0.604	1e-84
388493184	252	unknown [Medicago truncatula]	0.979	0.960	0.604	1e-84
356540563	251	PREDICTED: expansin-like B1-like [Glycin	0.983	0.968	0.618	9e-84
225466785	251	PREDICTED: expansin-like B1 [Vitis vinif	0.967	0.952	0.589	9e-82

>gi|255580799|ref|XP_002531220.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus communis] gi|223529180|gb|EEF31156.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]

 Score =  353 bits (905), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 165/247 (66%), Positives = 204/247 (82%), Gaps = 2/247 (0%)

Query: 1   MGLCQ-YYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDAN 59
           MGL   Y +  +V+LLPA+ YSQ  FT SRA++YGSPD LGTP GACGFG YG+TVNDAN
Sbjct: 1   MGLIYGYCMFCLVVLLPAIAYSQ-DFTGSRATYYGSPDCLGTPTGACGFGEYGRTVNDAN 59

Query: 60  VAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMAL 119
           VAGVSRL+ NGTGCG CYQVRC  P++C+D GV VVVTDYGEGD TDF+LS RA+ R+A 
Sbjct: 60  VAGVSRLYKNGTGCGGCYQVRCKAPQICSDDGVNVVVTDYGEGDKTDFILSSRAYARLAR 119

Query: 120 VDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVE 179
            + + EL+ +GVVD+E+ R+ CR+ GYN+ FKVHE+S++P+YLA+ +LY GGQND+LAV+
Sbjct: 120 PNMAAELFAYGVVDIEYRRISCRYAGYNVMFKVHEHSRFPEYLAIVVLYQGGQNDILAVQ 179

Query: 180 MWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVA 239
           +WQEDCK+W+ MR+A+GAV+D+ NPP G I LRFQVSGSAGLTWV A NAIP  WK GVA
Sbjct: 180 IWQEDCKEWIGMRKAYGAVWDMPNPPKGYITLRFQVSGSAGLTWVQAKNAIPSEWKVGVA 239

Query: 240 YESAIQL 246
           Y+SAIQL
Sbjct: 240 YDSAIQL 246

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126451|ref|XP_002329557.1| hypothetical protein POPTRDRAFT_783792 [Populus trichocarpa] gi|222870266|gb|EEF07397.1| hypothetical protein POPTRDRAFT_783792 [Populus trichocarpa]

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 162/235 (68%), Positives = 195/235 (82%), Gaps = 2/235 (0%)

Query: 14  LLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGC 73
           LLPA+ YSQ  +T SRA++YGSPD LGTP+GACGFG YG+TVNDANVAGVSRL+ NGTGC
Sbjct: 3   LLPAISYSQ-DYTFSRATYYGSPDCLGTPSGACGFGEYGRTVNDANVAGVSRLYKNGTGC 61

Query: 74  GACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVD 133
           G CYQVRC  P +CTD GV VVVTDYGEGD TDF+LSPRA+ RMA  + + EL  +GVVD
Sbjct: 62  GGCYQVRCKAPNLCTDDGVNVVVTDYGEGDKTDFILSPRAYARMAHPNMAVELIAYGVVD 121

Query: 134 VEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRR 193
           VEF R+PCR+ GYNL FKVHE+S++P YLA+ +LY  GQN++LAVE+WQEDCK+W  MRR
Sbjct: 122 VEFRRIPCRYSGYNLMFKVHEHSRFPDYLAIILLYQAGQNEILAVELWQEDCKEWRGMRR 181

Query: 194 AFGAVFDISNPPPGAINLRFQVSGSAGLT-WVVANNAIPQIWKAGVAYESAIQLA 247
           A+GAV+D+ NPP GAI+LRFQVSGSAG+T W  A N IP  WKAG+AY+S +QL+
Sbjct: 182 AYGAVWDMPNPPKGAISLRFQVSGSAGVTYWAQAANVIPSDWKAGIAYDSTVQLS 236

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138720|ref|XP_002326673.1| hypothetical protein POPTRDRAFT_589918 [Populus trichocarpa] gi|222833995|gb|EEE72472.1| hypothetical protein POPTRDRAFT_589918 [Populus trichocarpa]

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 161/243 (66%), Positives = 198/243 (81%), Gaps = 3/243 (1%)

Query: 6   YYLLSVVL--LLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGV 63
           Y +L VV   LLPA+ +SQ  +T SRA+++GSPD LGTP GACGFG YG+TVNDANVAGV
Sbjct: 9   YSILCVVAVALLPAISHSQ-DYTCSRATYFGSPDCLGTPTGACGFGGYGRTVNDANVAGV 67

Query: 64  SRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKS 123
           SRL+ NGTGCG CYQVRC    +C+D GV VVVTDYGEGD TDF+LS RA+ RMA  + +
Sbjct: 68  SRLFKNGTGCGGCYQVRCKASNLCSDDGVNVVVTDYGEGDKTDFILSTRAYARMARPNMA 127

Query: 124 EELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQE 183
            EL+ +GVVDVEF R+PCR+ GYNL FKVHE+S++P+YLA+ +LY  GQN++LAVE+ QE
Sbjct: 128 LELFAYGVVDVEFRRIPCRYNGYNLMFKVHEHSRFPEYLAIVLLYQAGQNEILAVELRQE 187

Query: 184 DCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESA 243
           DCK+W  MRRA+GAV+DI NPP GAI+L+ QV GSAG+TWV A+N +P  WKAGVAY+SA
Sbjct: 188 DCKEWRGMRRAYGAVWDIPNPPKGAISLKLQVCGSAGVTWVQADNVLPSDWKAGVAYDSA 247

Query: 244 IQL 246
           IQL
Sbjct: 248 IQL 250

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580801|ref|XP_002531221.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus communis] gi|223529181|gb|EEF31157.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]

 Score =  333 bits (854), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 158/242 (65%), Positives = 196/242 (80%), Gaps = 4/242 (1%)

Query: 6   YYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSR 65
           Y +  +++LLP + YSQ  FTSSRA++YGSPD LGTP GACGFG YG+TVN+ANVAGVSR
Sbjct: 9   YCMFCLMVLLPPITYSQ-DFTSSRATYYGSPDRLGTPTGACGFGEYGRTVNNANVAGVSR 67

Query: 66  LWNNGTGCGACYQVRCNVPE-VCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSE 124
           L+ NGTGCG CYQVRC  P  +C D GV VVVTDYGEGD TDF+LS RA+ R+A  + + 
Sbjct: 68  LYRNGTGCGGCYQVRCKAPHGICNDDGVNVVVTDYGEGDKTDFILSSRAYARLARPNMAA 127

Query: 125 ELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQED 184
           EL+ +GVVDV++ R+ CR+ GYNL FK+HE S++P+YLA+ +LY GGQND+LAV++WQED
Sbjct: 128 ELFAYGVVDVQYRRISCRYAGYNLIFKIHEYSRFPEYLAIVVLYQGGQNDILAVQIWQED 187

Query: 185 CKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAI 244
           CK+W+ MR+A+GAV+D+ NPP G I LRFQVSGSAGLTWV A NAIP+ WK GVAY   I
Sbjct: 188 CKEWIGMRKAYGAVWDMPNPPKGYITLRFQVSGSAGLTWVQAKNAIPREWKVGVAYN--I 245

Query: 245 QL 246
           QL
Sbjct: 246 QL 247

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563391|ref|XP_003549947.1| PREDICTED: expansin-like B1-like [Glycine max]

 Score =  326 bits (835), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 154/240 (64%), Positives = 186/240 (77%), Gaps = 1/240 (0%)

Query: 8   LLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLW 67
           L  VVLLLPALC SQ +FT SRA++YGSPD  G P GACGFG YG+TVND +VAGVSRLW
Sbjct: 11  LACVVLLLPALCSSQDSFTDSRATYYGSPDCYGNPRGACGFGEYGRTVNDGSVAGVSRLW 70

Query: 68  NNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMAL-VDKSEEL 126
            NG+GCGACYQ RC +P+ C + G YVVVTDYGEGD TDF++SPRA+ R+    D S EL
Sbjct: 71  RNGSGCGACYQARCKIPQYCDENGAYVVVTDYGEGDRTDFIMSPRAYSRLGRNADASAEL 130

Query: 127 YTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCK 186
           + +GVVD+E+ RVPC + GYN+ FKVHE+S+ P Y AV +LYV G  DV AVE++Q+DC+
Sbjct: 131 FKYGVVDIEYRRVPCSYTGYNVVFKVHEHSRNPDYFAVVVLYVDGTYDVTAVELFQQDCQ 190

Query: 187 DWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQL 246
           +W  MRRAFGA+FD SNPP G I LRFQVSGSAGL WV + NAI   WKAG  Y++ +QL
Sbjct: 191 EWKPMRRAFGAMFDYSNPPNGEIYLRFQVSGSAGLYWVQSKNAISGDWKAGATYDTNVQL 250

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497093|ref|XP_003517398.1| PREDICTED: expansin-like B1-like [Glycine max]

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/244 (61%), Positives = 182/244 (74%), Gaps = 1/244 (0%)

Query: 5   QYYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS 64
           Q  L  V LLLPALC SQ +FT SRA++YGSPD  G P GACGFG YGKTVND +VAGVS
Sbjct: 8   QLSLFCVTLLLPALCTSQDSFTCSRATYYGSPDCYGNPRGACGFGEYGKTVNDGSVAGVS 67

Query: 65  RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMAL-VDKS 123
            LW NG+GCGACYQVRC +P+ C + G YVVVTDYGEGD TDF++SPRA+ R+    D S
Sbjct: 68  WLWKNGSGCGACYQVRCKIPQFCDENGAYVVVTDYGEGDRTDFIMSPRAYSRLGRNADAS 127

Query: 124 EELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQE 183
            EL+ +GV+DVE+ RVPCR+ GYNL  KVHE+S+ P YLA+ +LY+GG  DV AVE+WQE
Sbjct: 128 AELFKYGVMDVEYRRVPCRYGGYNLLVKVHEHSRNPHYLAIVILYLGGTYDVTAVELWQE 187

Query: 184 DCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESA 243
           DC++W  MRRAFG VFD  NPP G I LRFQ+SG+A   WV + N I   W+ G  ++S 
Sbjct: 188 DCQEWRRMRRAFGTVFDAENPPRGDIKLRFQLSGNAEKYWVQSENVISSDWEGGAVFDSE 247

Query: 244 IQLA 247
           IQL 
Sbjct: 248 IQLG 251

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357482205|ref|XP_003611388.1| Expansin-like protein [Medicago truncatula] gi|355512723|gb|AES94346.1| Expansin-like protein [Medicago truncatula]

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 147/243 (60%), Positives = 180/243 (74%), Gaps = 1/243 (0%)

Query: 5   QYYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS 64
           Q   + V+L LP LC SQ +F  SRA++YGSPD    P GACG+G YG+TVND NVAGVS
Sbjct: 8   QIGFICVMLFLPVLCSSQDSFVCSRATYYGSPDCYANPKGACGYGDYGQTVNDGNVAGVS 67

Query: 65  RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALV-DKS 123
            LW NG+GCGACYQVRC +PE+C + G YVVVTD+G GD TDF++SPR + ++    D S
Sbjct: 68  WLWKNGSGCGACYQVRCKIPELCDENGAYVVVTDFGVGDRTDFIMSPRGYSKLGKNGDAS 127

Query: 124 EELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQE 183
            EL+ +GVVD+E+ R+PC++ GYN+ FKVHE SK P YLA+ +LYVGG NDV AV++WQE
Sbjct: 128 AELFKYGVVDIEYKRIPCKYNGYNILFKVHERSKNPHYLAILILYVGGTNDVTAVQLWQE 187

Query: 184 DCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESA 243
           DCK+W  MRRAFG VFD  NPP G I LR QVSGSAGL WV + N I   W+AG  Y+S 
Sbjct: 188 DCKEWRPMRRAFGTVFDAENPPRGEIKLRLQVSGSAGLYWVESKNVISSDWEAGSVYDSQ 247

Query: 244 IQL 246
           IQ 
Sbjct: 248 IQF 250

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493184|gb|AFK34658.1| unknown [Medicago truncatula]

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 147/243 (60%), Positives = 180/243 (74%), Gaps = 1/243 (0%)

Query: 5   QYYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS 64
           Q   + V+L LP LC SQ +F  SRA++YGSPD    P GACG+G YG+TVND NVAGVS
Sbjct: 9   QIGFICVMLFLPVLCSSQDSFVCSRATYYGSPDCYANPKGACGYGDYGQTVNDGNVAGVS 68

Query: 65  RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALV-DKS 123
            LW NG+GCGACYQVRC +PE+C + G YVVVTD+G GD TDF++SPR + ++    D S
Sbjct: 69  WLWKNGSGCGACYQVRCKIPELCDENGAYVVVTDFGVGDRTDFIMSPRGYSKLGKNGDAS 128

Query: 124 EELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQE 183
            EL+ +GVVD+E+ R+PC++ GYN+ FKVHE SK P YLA+ +LYVGG NDV AV++WQE
Sbjct: 129 AELFKYGVVDIEYKRIPCKYNGYNILFKVHERSKNPHYLAILILYVGGTNDVTAVQLWQE 188

Query: 184 DCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESA 243
           DCK+W  MRRAFG VFD  NPP G I LR QVSGSAGL WV + N I   W+AG  Y+S 
Sbjct: 189 DCKEWRPMRRAFGTVFDAENPPRGEIKLRLQVSGSAGLYWVESKNVISSDWEAGSVYDSQ 248

Query: 244 IQL 246
           IQ 
Sbjct: 249 IQF 251

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540563|ref|XP_003538757.1| PREDICTED: expansin-like B1-like [Glycine max]

 Score =  315 bits (807), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 151/244 (61%), Positives = 181/244 (74%), Gaps = 1/244 (0%)

Query: 5   QYYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS 64
           Q  ++ V LLLPAL  SQ +FT SRA++YGS D  G P GACGFG YGKTVND +VAGVS
Sbjct: 8   QLSIICVTLLLPALRTSQDSFTCSRATYYGSTDCYGNPRGACGFGEYGKTVNDGSVAGVS 67

Query: 65  RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRM-ALVDKS 123
            LW NG+GCGACYQVRC +P+ C + G YVVVTDYGEGD TDF++SPRA+ R+ +  D S
Sbjct: 68  WLWKNGSGCGACYQVRCKIPQFCDENGAYVVVTDYGEGDRTDFIMSPRAYSRLGSNADAS 127

Query: 124 EELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQE 183
            EL+ +GVVDVE+ RVPCR+ GYNL  KVHE S+ P YLA+ +LY+GG  DV AVE+WQE
Sbjct: 128 AELFKYGVVDVEYRRVPCRYGGYNLLVKVHEQSRNPHYLAIVILYLGGTYDVTAVELWQE 187

Query: 184 DCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESA 243
           DC++W  MRRAFG VFD  NPP G I LRFQ+ G A   WV + N I   W+AGV Y+S 
Sbjct: 188 DCQEWRRMRRAFGTVFDAENPPRGDIKLRFQLGGDAQQYWVQSKNVISGNWEAGVVYDSE 247

Query: 244 IQLA 247
           IQL 
Sbjct: 248 IQLG 251

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225466785|ref|XP_002273896.1| PREDICTED: expansin-like B1 [Vitis vinifera] gi|296088951|emb|CBI38517.3| unnamed protein product [Vitis vinifera]

 Score =  308 bits (790), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 141/239 (58%), Positives = 182/239 (76%)

Query: 8   LLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLW 67
            L  ++LLP LC  + TFT SRA++YGSPD LGTP GACGFG YG++VN  NV  VSRL+
Sbjct: 11  FLCFIVLLPLLCKCEDTFTYSRATYYGSPDCLGTPTGACGFGEYGRSVNGGNVGAVSRLY 70

Query: 68  NNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELY 127
            NGTGCGACYQVRC VP +C D G+ VVVTD+GEGD TDF+LSPR F  +A  + + +L+
Sbjct: 71  RNGTGCGACYQVRCKVPNLCADNGMKVVVTDHGEGDYTDFILSPRGFSMLARPNMAADLF 130

Query: 128 TFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKD 187
            +GVV +E+ RVPC++ G N+ FKVHE+S++P YLA+ MLY  G +D+ AV++WQEDC++
Sbjct: 131 AYGVVGIEYRRVPCQYPGSNIFFKVHEHSRFPDYLAIVMLYQAGLSDITAVDIWQEDCQE 190

Query: 188 WVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQL 246
           W  MR+++GAV+D++NPP G + LRFQVSG  G  WV   N IP  WKAGVAY+SA QL
Sbjct: 191 WKGMRKSYGAVWDMANPPKGPVGLRFQVSGRGGQKWVQLMNVIPSDWKAGVAYDSAFQL 249

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	247
TAIR|locus:2130444	250	EXLB1 "expansin-like B1" [Arab	0.898	0.888	0.542	5.1e-67
TAIR|locus:2077177	265	EXLA1 "expansin-like A1" [Arab	0.878	0.818	0.327	6e-32
TAIR|locus:2121803	265	EXLA2 "expansin-like A2" [Arab	0.882	0.822	0.331	9.8e-32
TAIR|locus:2077167	263	EXLA3 "expansin-like A3" [Arab	0.878	0.825	0.333	2e-31
TAIR|locus:2018521	273	EXPB2 "expansin B2" [Arabidops	0.858	0.776	0.322	1.6e-24
TAIR|locus:2123643	264	EXPB3 "expansin B3" [Arabidops	0.866	0.810	0.302	1.4e-23
TAIR|locus:2061918	253	EXPA8 "expansin A8" [Arabidops	0.441	0.430	0.356	3.2e-21
TAIR|locus:2051338	271	EXPB1 "expansin B1" [Arabidops	0.866	0.789	0.280	7.2e-20
TAIR|locus:2055594	259	EXPB4 "expansin B4" [Arabidops	0.850	0.810	0.304	1.2e-19
TAIR|locus:4515102723	223	EXPB6 "AT1G65681" [Arabidopsis	0.821	0.910	0.285	1.4e-18

TAIR|locus:2130444 EXLB1 "expansin-like B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
 Identities = 121/223 (54%), Positives = 153/223 (68%)

Query:    25 FTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS-RLWNNGTGCGACYQVRCNV 83
             F +SRA++YGSPD    P G CG+G +G+ +N+  V+GVS RLWNNGTGCGACYQVRC +
Sbjct:    27 FVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKI 86

Query:    84 PEXXXXXXXXXXXXXXXXXXXXXFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRF 143
             P                      F+LSP+A+GRMA      +LY+FGVV+VE+ R+PCR+
Sbjct:    87 PPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRY 146

Query:   144 RGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISN 203
              GYNL +K+HE S  P YLA+ +LYVGG ND+LAVE+WQEDCK+W  MRR FGAV D+ N
Sbjct:   147 AGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQN 206

Query:   204 PPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQL 246
             PP G + LRF V GSAG+ W+ + NAIP  W AG  Y+S I L
Sbjct:   207 PPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAGATYDSNILL 249

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS

GO:0009828 "plant-type cell wall loosening" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2077177 EXLA1 "expansin-like A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 73/223 (32%), Positives = 119/223 (53%)

Query:    28 SRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAG-VSRLWNNGTGCGACYQVRCNVPEX 86
             S+A+++ S   L +  GAC +G+   +    ++A  +  ++ +G GCGAC+QVRC  P+ 
Sbjct:    28 SKAAYFSSASALSS--GACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKL 85

Query:    87 XXXXXXXXXXXXXXXXXXXXFVLSPRAFGRMA--LVDKSEELYTFGVVDVEFLRVPCRFR 144
                                  VLS RAF  MA  +V   ++L   G+VD+E+ RVPC + 
Sbjct:    86 CSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEYQRVPCDYG 145

Query:   145 GYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCK-DWVAMRRAFGAVFDISN 203
               N+  +V E SK P YL + +LY GGQ +V+++++ Q     +W  M R+ GAV+    
Sbjct:   146 NKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDK 205

Query:   204 PPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQL 246
              P GAI  RF V+G      + + + +P  W+AG  Y++ +Q+
Sbjct:   206 VPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYDAGVQI 248

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2121803 EXLA2 "expansin-like A2" [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 74/223 (33%), Positives = 116/223 (52%)

Query:    27 SSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAG-VSRLWNNGTGCGACYQVRCNVPE 85
             SS+A+++ S   L +  GAC +G+        ++A  +  ++ +G+GCGAC+QVRC  P 
Sbjct:    28 SSKAAYFSSASALSS--GACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQVRCKNPT 85

Query:    86 XXXXXXXXXXXXXXXXXXXXXFVLSPRAFGRMA--LVDKSEELYTFGVVDVEFLRVPCRF 143
                                   VLS RAF  MA  +V    +L   G+VD+E+ RVPC +
Sbjct:    86 LCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIEYRRVPCDY 145

Query:   144 RGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISN 203
                 +  +V E+SK P YLA+ +LY GGQ +V+A+ + Q     W  M R+ GAV+    
Sbjct:   146 GNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDK 205

Query:   204 PPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQL 246
              P GA+  RF V+       V +   +P  W+AG +Y++ +Q+
Sbjct:   206 VPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYDAGVQI 248

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

TAIR|locus:2077167 EXLA3 "expansin-like A3" [Arabidopsis thaliana (taxid:3702)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 74/222 (33%), Positives = 113/222 (50%)

Query:    28 SRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAG-VSRLWNNGTGCGACYQVRCNVPEX 86
             S+AS++ S   L +  GAC +G    +    ++A  +  ++ +G GCGAC+QVRC  P+ 
Sbjct:    28 SKASYFSSASALSS--GACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKL 85

Query:    87 XXXXXXXXXXXXXXXXXXXXFVLSPRAFGRMA--LVDKSEELYTFGVVDVEFLRVPCRFR 144
                                  VLS RAF  MA  +V   + L   G+VDVE+ RVPC + 
Sbjct:    86 CNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDVEYQRVPCNYG 145

Query:   145 GYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNP 204
               NL  +V E SK P YLA+ +LY GGQ +V+ +++       W  M R+ GAV+     
Sbjct:   146 KRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKV 205

Query:   205 PPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQL 246
             P GA+  +F V+G      V +   +P  W +G  Y++ +Q+
Sbjct:   206 PTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAGVQI 247

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=NAS

GO:0009828 "plant-type cell wall loosening" evidence=NAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2018521 EXPB2 "expansin B2" [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 72/223 (32%), Positives = 114/223 (51%)

Query:    30 ASFYGSPDGLGTPAGACGFG-AYGKTVNDANV-AGVSRLWNNGTGCGACYQVRCNVPEXX 87
             +++YG+P G G+  GACG+G A  +      V AG   L+ +G GCGACYQV+C      
Sbjct:    52 STWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSAC 111

Query:    88 XXXXXXXXXXXXX---XXXXXXFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFR 144
                                   F LS  AFG MA+  +  +L   G + + + +V C + 
Sbjct:   112 SKNPVTVVITDECPGCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYI 171

Query:   145 GYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQE-DCKDWVAMRRAFGAVF--DI 201
             G  + F+V + S    + AV + YV G  ++  +E+ Q  D   W++M +++GAV+  D+
Sbjct:   172 GKTVTFQVDKGSNANSF-AVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDV 230

Query:   202 SNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAI 244
             S+P    ++LR   S  +G T VVA+N IP  W+ G  Y+S +
Sbjct:   231 SSPLRAPLSLRV-TSLESGKT-VVASNVIPANWQPGAIYKSNV 271

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2123643 EXPB3 "expansin B3" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 68/225 (30%), Positives = 115/225 (51%)

Query:    30 ASFYGSPDGLGTPAGACGFGAYG--KTVNDANVAGVSR-LWNNGTGCGACYQVRC---NV 83
             A++YGSP+G G+  GACG+G     K ++ A V  V+  L+ NG GCGACY+VRC   ++
Sbjct:    41 ATWYGSPNGDGSDGGACGYGTLVDVKPLH-ARVGAVNPILFKNGEGCGACYKVRCLDKSI 99

Query:    84 PEXXXXXXXXXXXXXXXXXXXXXFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRF 143
                                    F LS   FGR+A+  +S  L   G++ V + R  C++
Sbjct:   100 CSRRAVTVIITDECPGCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKY 159

Query:   144 RGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDI-S 202
             RG N+ F V+E S    +L++ + +  G+ D+ ++ + Q   ++W+ M+  +GA + I  
Sbjct:   160 RGKNIAFHVNEGST-DFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANWCIIG 218

Query:   203 NPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQLA 247
              P  G  +++     SAG T + A + +P+ W     Y S +  +
Sbjct:   219 GPLKGPFSIKLTTL-SAGKT-LSATDVVPRNWAPKATYSSRLNFS 261

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0019953 "sexual reproduction" evidence=IEA

GO:0006949 "syncytium formation" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2061918 EXPA8 "expansin A8" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
 Identities = 41/115 (35%), Positives = 61/115 (53%)

Query:   127 YTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCK 186
             Y  G+V V F RVPC  +G  ++F ++ +S Y   + +S   VGG  DV AV +     +
Sbjct:   141 YRAGIVPVSFRRVPCMKKG-GIRFTINGHS-YFNLVLISN--VGGAGDVHAVSIKGSKTQ 196

Query:   187 DWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYE 241
              W AM R +G  +  SN      +L FQV+ S G T +V+N+  P  W+ G  Y+
Sbjct:   197 SWQAMSRNWGQNWQ-SNSYMNDQSLSFQVTTSDGRT-LVSNDVAPSNWQFGQTYQ 249

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2051338 EXPB1 "expansin B1" [Arabidopsis thaliana (taxid:3702)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 64/228 (28%), Positives = 109/228 (47%)

Query:    30 ASFYGSPDGLGTPAGACGFGAYGKTVN-DANVAGVSR-LWNNGTGCGACYQVRC------ 81
             A++YGS +G G+  GACG+G+        A V  VS  L+  G GCGACY+VRC      
Sbjct:    45 ATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTIC 104

Query:    82 NVPEXXXXXXXXXXXXXXXXXXXXXFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPC 141
             +                        F LS  AFG MA+   +  +   G++++ + R  C
Sbjct:   105 SKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTAC 164

Query:   142 RFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDI 201
             ++RG N+ F V+  S    +L++ + Y  G+ D+ ++ + Q   K+W++M+  +GA + I
Sbjct:   165 KYRGKNIAFHVNAGST-DYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANWCI 223

Query:   202 -SNPPPGAINLRFQ-VSGSAGLTWVVANNAIPQIWKAGVAYESAIQLA 247
                P  G  +++   +S +  L+   A + IP  W     Y S +  +
Sbjct:   224 VEGPLKGPFSVKLTTLSNNKTLS---ATDVIPSNWVPKATYTSRLNFS 268

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:2055594 EXPB4 "expansin B4" [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 68/223 (30%), Positives = 105/223 (47%)

Query:    31 SFYGSPDGLGTPAGACGFG-AYGKTVNDANV-AGVSRLWNNGTGCGACYQVRC-NVPEXX 87
             ++YG P G G+  GACG+G A       A V AG   L+NNG GCG CYQV C   P   
Sbjct:    39 TWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACS 98

Query:    88 XXXXXXXXXXXXX----XXXXXXFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRF 143
                                      LS +A G +A   ++++L + GV+ V + R  C +
Sbjct:    99 GSPITVTITDECPGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLY 158

Query:   144 RGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISN 203
             RG N+ F++   +  P Y++  + Y  G  D+  VE+ Q     +++M+    AV+ +++
Sbjct:   159 RGTNIVFRMDAGAN-PYYISFVVEYENGDGDLSNVEI-QPAGGSFISMQEMRSAVWKVNS 216

Query:   204 PPP--GAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAI 244
                  G  N+R   SG +    +VA N IP  WK   +Y S +
Sbjct:   217 GSALRGPFNIRL-TSGESHKV-IVAYNVIPANWKPDESYRSIV 257

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0019953 "sexual reproduction" evidence=IEA

TAIR|locus:4515102723 EXPB6 "AT1G65681" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 61/214 (28%), Positives = 96/214 (44%)

Query:    38 GLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVPEXXXXXXXXXXXX 97
             G G+  GACGF      +     AG   ++NNG GCG C+Q+ CN               
Sbjct:    11 GAGSTGGACGFAVANPPLYGMVSAGGPSVFNNGIGCGTCFQILCNGHPACSRRPITVTIT 70

Query:    98 XXX-----XXXXXXFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKV 152
                           F LS +A G +A   + + L + GV+ V + RV C +R  N+ F++
Sbjct:    71 DECPGGPCASEPAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRRVECLYRRTNIAFRM 130

Query:   153 HENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPP--GAIN 210
                +  P Y++  + Y  G  D+  +E+   D  +++ M+    AV+ IS+  P  G  N
Sbjct:   131 DPGAN-PYYISFVVEYENGDGDLAYIEIQPAD-GEFIPMQEMRSAVWKISSGSPLTGPFN 188

Query:   211 LRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAI 244
             +R   + S  +  V+A N IP  WK    Y S +
Sbjct:   189 IRLTSAESHKV--VLAYNVIPANWKPNETYRSVV 220

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

GO:0019953 "sexual reproduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O23547	EXLB1_ARATH	No assigned EC number	0.5892	0.9676	0.956	yes	no
Q850K7	EXLB1_ORYSJ	No assigned EC number	0.4074	0.9635	0.9296	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: PtrEXLB1 expansin-related protein 1 precursor (236 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	247
PLN03023	247	PLN03023, PLN03023, Expansin-like B1; Provisional	1e-142
PLN00050	247	PLN00050, PLN00050, expansin A; Provisional	3e-21
pfam03330	77	pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like	3e-15
PLN00193	256	PLN00193, PLN00193, expansin-A; Provisional	4e-14
pfam01357	82	pfam01357, Pollen_allerg_1, Pollen allergen	8e-14
PLN03024	125	PLN03024, PLN03024, Putative EG45-like domain cont	3e-04
smart00837	87	smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like	0.004

>gnl|CDD|215542 PLN03023, PLN03023, Expansin-like B1; Provisional

 Score =  398 bits (1025), Expect = e-142
 Identities = 166/247 (67%), Positives = 196/247 (79%), Gaps = 2/247 (0%)

Query: 1   MGLCQYY-LLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDAN 59
             L  Y   L V++LLP LC SQ  FT SRA++YGSPD LGTP GACGFG YG+TVN  N
Sbjct: 1   FPLSHYCCFLCVIVLLPLLCKSQ-DFTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGN 59

Query: 60  VAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMAL 119
           VAGVSRL+ NGTGCGACYQVRC  P +C+D GV VVVTDYGEGD TDF+LSPRA+ R+A 
Sbjct: 60  VAGVSRLYRNGTGCGACYQVRCKAPNLCSDDGVNVVVTDYGEGDKTDFILSPRAYARLAR 119

Query: 120 VDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVE 179
            + + EL+ +GVVDVE+ R+PCR+ GYNL FKVHE+S++P YLA+ MLY  GQND+LAVE
Sbjct: 120 PNMAAELFAYGVVDVEYRRIPCRYAGYNLFFKVHEHSRFPDYLAIVMLYQAGQNDILAVE 179

Query: 180 MWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVA 239
           +WQEDCK+W  MR+A+GAV+D+ NPP G I LRFQVSGSAG TWV A N IP  WKAGVA
Sbjct: 180 IWQEDCKEWRGMRKAYGAVWDMPNPPKGPITLRFQVSGSAGQTWVQAKNVIPSDWKAGVA 239

Query: 240 YESAIQL 246
           Y+S IQL
Sbjct: 240 YDSNIQL 246

Length = 247

>gnl|CDD|165628 PLN00050, PLN00050, expansin A; Provisional

 Score = 88.9 bits (220), Expect = 3e-21
 Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 30/232 (12%)

Query: 25  FTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSR-LWNNGTGCGACYQVRC-N 82
           +T + A+FYG  D  GT  GACG+G         N A +S  L+NNG  CGAC++++C N
Sbjct: 25  WTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVN 84

Query: 83  VPEVCTDYGVYVVVTDYGEGDDT--------------DFVLSPRAFGRMALVDKSEELYT 128
               C    + +  T++   +                 F LS   F ++A        Y 
Sbjct: 85  DNIWCLPGSIIITATNFCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIA-------QYK 137

Query: 129 FGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDW 188
            G+V V++ RV CR  G  ++F ++ +S +   L  +   VGG  D++AV + +    +W
Sbjct: 138 AGIVPVQYRRVACRKSG-GIRFTINGHSYFNLVLITN---VGGAGDIVAVSI-KGSKSNW 192

Query: 189 VAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAY 240
            AM R +G  +  SN       L F+V+ S G T V++NNA P  W  G  Y
Sbjct: 193 QAMSRNWGQNWQ-SNSYLNGQALSFKVTTSDGRT-VISNNAAPSNWAFGQTY 242

Length = 247

>gnl|CDD|217497 pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 68.0 bits (167), Expect = 3e-15
 Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 13/83 (15%)

Query: 60  VAGVSRLWNNGTGCGACYQVRCNVPE----VCTDY-GVYVVVTDYG-EGDDTDFVLSPRA 113
            AG + L+N+GT CG CYQV+C         C     V V +TD         F LS  A
Sbjct: 2   AAGSASLYNDGTACGECYQVKCLTAAHPTGTCRVLRSVTVTITDRCPFPPRRHFDLSGPA 61

Query: 114 FGRMALVDKSEELYTFGVVDVEF 136
           F  +A           G+V VE+
Sbjct: 62  FEALAKPRA-------GIVPVEY 77

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 77

>gnl|CDD|215097 PLN00193, PLN00193, expansin-A; Provisional

 Score = 69.6 bits (170), Expect = 4e-14
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 33/262 (12%)

Query: 8   LLSVVLLLPALCY-----SQFT---FTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDAN 59
           LL + +LL   CY     + FT   +T + A+FYG  D  GT  GACG+G    T     
Sbjct: 5   LLGLAILLQFCCYLFINVNAFTPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTR 64

Query: 60  VAGVSR-LWNNGTGCGACYQVRCNV---PEVCTDYGVYVVVT-------DYG-EGDDTDF 107
            A +S  L+N+G  CG CY++ C+       C   G  V +T       +Y    ++  +
Sbjct: 65  TAALSTALFNDGASCGQCYRIMCDYQADSRWCIK-GASVTITATNFCPPNYALPNNNGGW 123

Query: 108 VLSPRAFGRMALVDKSEE---LYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAV 164
              P     MA    + E   +Y  G+V V F RVPC+  G  ++F ++    Y + + +
Sbjct: 124 CNPPLQHFDMA--QPAWEKIGIYRGGIVPVLFQRVPCKKHG-GVRFTIN-GRDYFELVLI 179

Query: 165 SMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWV 224
           S   VGG   + +V + +     W+AM R +GA +  SN      +L F+V+ + G T  
Sbjct: 180 S--NVGGAGSIQSVSI-KGSKTGWMAMSRNWGANWQ-SNAYLDGQSLSFKVTTTDGQTRF 235

Query: 225 VANNAIPQIWKAGVAYESAIQL 246
              N +P  W  G  + S++Q 
Sbjct: 236 FL-NVVPANWGFGQTFSSSVQF 256

Length = 256

>gnl|CDD|216453 pfam01357, Pollen_allerg_1, Pollen allergen

 Score = 64.5 bits (158), Expect = 8e-14
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)

Query: 148 LKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDI-SNPPP 206
           ++F V+  S  P +LAV +  VGG  D++AVE+ +    +W+ M R +GA +   S    
Sbjct: 1   VRFTVNGGSN-PYFLAVLVENVGGDGDIVAVEIKEAGSGEWIPMSRNWGANWQSDSVLLG 59

Query: 207 GAINLRFQVSGSAGLTWVVANNAIP 231
           G ++ R   S S     +VA+N IP
Sbjct: 60  GPLSFRVTSSDSGK--TLVADNVIP 82

This family contains allergens lol PI, PII and PIII from Lolium perenne. Length = 82

>gnl|CDD|178595 PLN03024, PLN03024, Putative EG45-like domain containing protein 1; Provisional

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 16/96 (16%)

Query: 30  ASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS-RLWNNGTGCGACYQVRCN-----V 83
           A+FY S     TP+ AC    Y  T     +A  S  LWNNG  CG  + V+C      V
Sbjct: 26  ATFYTSY----TPS-AC----YRGTSFGVMIAAASDSLWNNGRVCGKMFTVKCKGPRNAV 76

Query: 84  PEVCTDYGVYVVVTDY-GEGDDTDFVLSPRAFGRMA 118
           P  CT   V V + D+   G  +   LS  AF ++A
Sbjct: 77  PHPCTGKSVTVKIVDHCPSGCASTLDLSREAFAQIA 112

Length = 125

>gnl|CDD|129070 smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score = 35.1 bits (81), Expect = 0.004
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 66 LWNNGTGCGACYQVRCN-VPEVCTDYGVYVVVT 97
          L+NNG  CGACY++ C   P+ C   G  + VT
Sbjct: 8  LFNNGASCGACYEIMCVDSPKWCKP-GGSITVT 39

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 87

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	247
PLN03023	247	Expansin-like B1; Provisional	100.0
PLN00193	256	expansin-A; Provisional	100.0
PLN00050	247	expansin A; Provisional	100.0
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	99.97
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	99.96
PLN00115	118	pollen allergen group 3; Provisional	99.92
PF01357	82	Pollen_allerg_1: Pollen allergen; InterPro: IPR007	99.9
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.86
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.79
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	99.07
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	98.32
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	97.88
PRK10672	361	rare lipoprotein A; Provisional	97.27
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	97.24
PF02015	201	Glyco_hydro_45: Glycosyl hydrolase family 45; Inte	90.56
PF03404	131	Mo-co_dimer: Mo-co oxidoreductase dimerisation dom	88.2
cd02110	317	SO_family_Moco_dimer Subgroup of sulfite oxidase (	83.51

>PLN03023 Expansin-like B1; Provisional

Probab=100.00  E-value=3.7e-72  Score=490.39  Aligned_cols=242  Identities=68%  Similarity=1.243  Sum_probs=225.3

Q ss_pred             hhHHHHHHHhhhhccccCCCceeEEEEEeCCCCCCCCCCcccCCCCCCCCCCCceEEEeccccCCCCCCCceEEEEeCCC
Q 025810            5 QYYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVP   84 (247)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~g~aT~y~~~~~~g~~~GaCGy~~~~~~~~~~~~aA~s~~~~~g~~CG~C~~V~c~~~   84 (247)
                      .|++|+++++++.+..++ .|++++|||||++++.|+++|||||+++..+.++.++||+++||++|++||+||||+|.++
T Consensus         6 ~~~~~~~~~~~~~~~~~~-~W~~a~AT~Yg~~~g~gt~gGACGYg~~~~~~~g~~~aa~s~Lf~~G~~CGaCy~irC~~~   84 (247)
T PLN03023          6 YCCFLCVIVLLPLLCKSQ-DFTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVSRLYRNGTGCGACYQVRCKAP   84 (247)
T ss_pred             hHHHHHHHHHhhhhhhcC-CcccceEEEeCCCCCCCCCCccccCCccccCCCcceeeeehhhhcCCchhcccEEeecCCC
Confidence            366777777777766666 4999999999999999999999999998887888999999999999999999999999999


Q ss_pred             CcccCCcEEEEEeeCCCCCCCCeeeCHHHHhhccccccccccccCcEEEEEEEEEeecccCCceEEEEecCCCCCcEEEE
Q 025810           85 EVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAV  164 (247)
Q Consensus        85 ~~C~~~~v~V~V~D~Cp~~~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~~~g~ni~~~v~~gS~~~~w~a~  164 (247)
                      ++|++++|+|+|||.||+++.|||||..||.+||.|++++++++.|+++|+||||||.++|++|+|+|+++|.+++||++
T Consensus        85 ~~C~~~~v~V~iTd~~~~~~~hFdLS~~AF~~iA~pg~~~~l~~aGiv~v~YrRVpC~~~G~~i~F~V~~~s~~p~yl~v  164 (247)
T PLN03023         85 NLCSDDGVNVVVTDYGEGDKTDFILSPRAYARLARPNMAAELFAYGVVDVEYRRIPCRYAGYNLFFKVHEHSRFPDYLAI  164 (247)
T ss_pred             CccCCCCeEEEEEeCCCCCCCccccCHHHHHHHhCccccchhccCcEEEeEEEEEecccCCCceEEEEecCCCCCceEEE
Confidence            99999999999999999999999999999999999998888899999999999999999999999999999955999999


Q ss_pred             EEEEcCCCcceEEEEEEecCCCCeEEcccccCceeecCCCCCCCeeEEEEEEecCCCEEEEEecccCCCCcCCcEEecCC
Q 025810          165 SMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAI  244 (247)
Q Consensus       165 ~i~n~gg~~~I~sVev~~~~~~~W~~m~R~~gn~W~~~~~~~gp~~lr~~vt~~~G~~~vv~~~vip~~w~~g~~y~t~~  244 (247)
                      +|.|++|.++|++|||+++++..|++|+|+||++|+.+.+++|||+|||+++.++|+++|+++||||++|++|+||++.+
T Consensus       165 lv~~vgG~GdI~~V~Ik~~~~~~W~~M~rnwGa~W~~~~~l~Gp~slrf~v~~~~g~~~vva~nViPa~Wk~G~TY~s~v  244 (247)
T PLN03023        165 VMLYQAGQNDILAVEIWQEDCKEWRGMRKAYGAVWDMPNPPKGPITLRFQVSGSAGQTWVQAKNVIPSDWKAGVAYDSNI  244 (247)
T ss_pred             EEEEcCCCccEEEEEEEecCCCCceECccCCcceeEcCCCCCCceeEEEEEEeCCCcEEEEECceeCCCCCCCCEEeccc
Confidence            99999999999999999877889999999999999999999999999999998887456899999999999999999999


Q ss_pred             CCC
Q 025810          245 QLA  247 (247)
Q Consensus       245 qF~  247 (247)
                      ||+
T Consensus       245 q~~  247 (247)
T PLN03023        245 QLD  247 (247)
T ss_pred             ccC
Confidence            996

>PLN00193 expansin-A; Provisional

Probab=100.00  E-value=3.7e-64  Score=442.02  Aligned_cols=213  Identities=29%  Similarity=0.592  Sum_probs=192.3

Q ss_pred             ccCCCceeEEEEEeCCCCCCCCCCcccCCCCCCCCCCCceEEEec-cccCCCCCCCceEEEEeC---CCCcccCC-cEEE
Q 025810           20 YSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS-RLWNNGTGCGACYQVRCN---VPEVCTDY-GVYV   94 (247)
Q Consensus        20 ~~~~~~~~g~aT~y~~~~~~g~~~GaCGy~~~~~~~~~~~~aA~s-~~~~~g~~CG~C~~V~c~---~~~~C~~~-~v~V   94 (247)
                      ...++|++|+||||+.+++.|+++|||||+++..++++.++||+| ++|++|+.||+||||+|.   ++++|.++ +|+|
T Consensus        25 ~~~~~W~~a~AT~Yg~~d~~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyev~C~~~~~~~~C~~g~sV~V  104 (256)
T PLN00193         25 FTPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYRIMCDYQADSRWCIKGASVTI  104 (256)
T ss_pred             cCCCCceeeEEEEcCCCCCCCCCCcccCCCCccccCCCceeeecCHhHccCCccccCeEEEECCCCCCCccccCCCeEEE
Confidence            335589999999999998888899999999988888899999999 999999999999999994   56789765 8999


Q ss_pred             EEeeCCCC-----------C---CCCeeeCHHHHhhccccccccccccCcEEEEEEEEEeecccCCceEEEEecCCCCCc
Q 025810           95 VVTDYGEG-----------D---DTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQ  160 (247)
Q Consensus        95 ~V~D~Cp~-----------~---~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~~~g~ni~~~v~~gS~~~~  160 (247)
                      +|||+||.           |   +.|||||+.||.+||       .++.|+++|+||||+|+++| ||+|+|++   ++|
T Consensus       105 t~td~CP~n~~~~~~~ggwC~~~~~HFDLS~~AF~~iA-------~~~~Giv~V~yrRVpC~~~G-~i~f~v~g---n~y  173 (256)
T PLN00193        105 TATNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIG-------IYRGGIVPVLFQRVPCKKHG-GVRFTING---RDY  173 (256)
T ss_pred             EEecCCCCcccccccCCCcCCCCCcccccCHHHHHHHh-------hhcCCeEeEEEEEeccccCC-CcEEEEcC---Ccc
Confidence            99999996           3   479999999999999       45799999999999999999 99999984   589


Q ss_pred             EEEEEEEEcCCCcceEEEEEEecCCCCeEEcccccCceeecCCCCCCCeeEEEEEEecCCCEEEEEecccCCCCcCCcEE
Q 025810          161 YLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAY  240 (247)
Q Consensus       161 w~a~~i~n~gg~~~I~sVev~~~~~~~W~~m~R~~gn~W~~~~~~~gp~~lr~~vt~~~G~~~vv~~~vip~~w~~g~~y  240 (247)
                      |++++|.|++|.++|++|||++.+ ..|++|+|+||++|+.+.++.++ +|+||||+.+| +++++.||||++|++|++|
T Consensus       174 ~~~vlv~nv~G~gdV~~v~Ik~~~-~~W~~M~R~wGa~W~~~~~l~g~-plsfRvts~~G-~~~~~~~viPa~W~~G~ty  250 (256)
T PLN00193        174 FELVLISNVGGAGSIQSVSIKGSK-TGWMAMSRNWGANWQSNAYLDGQ-SLSFKVTTTDG-QTRFFLNVVPANWGFGQTF  250 (256)
T ss_pred             EEEEEEEEeCCCccEEEEEEecCC-CCeeECcccccceeEecCCCCCC-CEEEEEEEcCC-eEEEECceeCCCCCCCCeE
Confidence            999999999999999999999754 58999999999999998777775 57777777788 8999999999999999999


Q ss_pred             ecCCCC
Q 025810          241 ESAIQL  246 (247)
Q Consensus       241 ~t~~qF  246 (247)
                      ++.+||
T Consensus       251 ~s~vqf  256 (256)
T PLN00193        251 SSSVQF  256 (256)
T ss_pred             ecCccC
Confidence            999998

>PLN00050 expansin A; Provisional

Probab=100.00  E-value=9.6e-63  Score=431.44  Aligned_cols=210  Identities=33%  Similarity=0.625  Sum_probs=190.0

Q ss_pred             CCCceeEEEEEeCCCCCCCCCCcccCCCCCCCCCCCceEEEec-cccCCCCCCCceEEEEeCCC-CcccCCcEEEEEeeC
Q 025810           22 QFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS-RLWNNGTGCGACYQVRCNVP-EVCTDYGVYVVVTDY   99 (247)
Q Consensus        22 ~~~~~~g~aT~y~~~~~~g~~~GaCGy~~~~~~~~~~~~aA~s-~~~~~g~~CG~C~~V~c~~~-~~C~~~~v~V~V~D~   99 (247)
                      ..+|.+++|||||.+++.|+++|||||+++..++++.++||+| .+|++|+.||+||||+|.+. .+|.+++|+|+|||+
T Consensus        22 ~~~W~~a~AT~Yg~~dg~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyeV~C~~~~~~C~~gsV~V~itd~  101 (247)
T PLN00050         22 GSGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDNIWCLPGSIIITATNF  101 (247)
T ss_pred             CCCccccEEEEcCCCCCCCCCCcccCCCCccccCCCceeeeccHhHccCCccccceEEEEcCCCCcccCCCcEEEEEecC
Confidence            4579999999999999888999999999988888999999999 99999999999999999653 579999999999999


Q ss_pred             CCC-----------C---CCCeeeCHHHHhhccccccccccccCcEEEEEEEEEeecccCCceEEEEecCCCCCcEEEEE
Q 025810          100 GEG-----------D---DTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVS  165 (247)
Q Consensus       100 Cp~-----------~---~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~~~g~ni~~~v~~gS~~~~w~a~~  165 (247)
                      ||.           |   +.|||||++||.+||.       ++.|+++|+||||||.++| ||+|+|++++   ||++++
T Consensus       102 CP~~~~~~~~~~gwC~~~~~hFDLS~~AF~~iA~-------~~aGii~V~yRRVpC~~~G-~i~f~v~g~s---y~~~vl  170 (247)
T PLN00050        102 CPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQ-------YKAGIVPVQYRRVACRKSG-GIRFTINGHS---YFNLVL  170 (247)
T ss_pred             CCCCcCcCccCCCcCCCCCcccccCHHHHHHHhh-------hcCCeeeeEEEEecCcCCC-CeEEEEcCCc---eeEEEE
Confidence            996           3   4899999999999994       5799999999999999999 9999998744   999999


Q ss_pred             EEEcCCCcceEEEEEEecCCCCeEEcccccCceeecCCCCCCCeeEEEEEEecCCCEEEEEecccCCCCcCCcEEecCCC
Q 025810          166 MLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQ  245 (247)
Q Consensus       166 i~n~gg~~~I~sVev~~~~~~~W~~m~R~~gn~W~~~~~~~gp~~lr~~vt~~~G~~~vv~~~vip~~w~~g~~y~t~~q  245 (247)
                      |.|++|.++|++|||+++ ...|++|+|+||++|+.+.++.++ +|+||||+.+| +++++.||||++|++|++|++. |
T Consensus       171 v~nv~G~gdi~~V~ikg~-~~~W~~M~R~wGa~W~~~~~l~g~-~lsfRvt~~~G-~~~~~~~V~Pa~W~~G~ty~~~-~  246 (247)
T PLN00050        171 ITNVGGAGDIVAVSIKGS-KSNWQAMSRNWGQNWQSNSYLNGQ-ALSFKVTTSDG-RTVISNNAAPSNWAFGQTYTGM-Q  246 (247)
T ss_pred             EEEcCCCccEEEEEEecC-CCCeeECccccCceeEccCCCCCC-cEEEEEEecCC-cEEEECceeCCCCCCCCeEecC-c
Confidence            999999999999999964 358999999999999988777774 56677777777 8999999999999999999994 8


Q ss_pred             C
Q 025810          246 L  246 (247)
Q Consensus       246 F  246 (247)
                      |
T Consensus       247 f  247 (247)
T PLN00050        247 F  247 (247)
T ss_pred             C
Confidence            8

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=99.97  E-value=8.9e-29  Score=203.53  Aligned_cols=199  Identities=22%  Similarity=0.296  Sum_probs=161.1

Q ss_pred             ccccCCCceeEEEEEeCCCCCCCCCCcccCCCCCCCCCCCceEEEec-cccCCC----CCCCceEEEEeCCCCcccCCcE
Q 025810           18 LCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS-RLWNNG----TGCGACYQVRCNVPEVCTDYGV   92 (247)
Q Consensus        18 ~~~~~~~~~~g~aT~y~~~~~~g~~~GaCGy~~~~~~~~~~~~aA~s-~~~~~g----~~CG~C~~V~c~~~~~C~~~~v   92 (247)
                      ..++-++.++|.|||-+.+.    .+||--.   ++.+..+.|.|+| .+-+-|    +.-|+.++|.  +|    ++.+
T Consensus        23 ~s~awd~~f~G~ATyTgsGY----sGGAflL---DPI~sd~eITAlNPaqlNlGGipAAmAGaYLrVq--GP----KG~T   89 (232)
T COG4305          23 ASAAWDDLFEGYATYTGSGY----SGGAFLL---DPIPSDMEITALNPAQLNLGGIPAAMAGAYLRVQ--GP----KGKT   89 (232)
T ss_pred             cccccccccceeEEEecccc----cCceEEe---cCcCCcceeeecCHHHcccCCchhhhccceEEEE--CC----CCce
Confidence            33455567899999987753    5777653   4445578899999 666644    6799999998  55    6788


Q ss_pred             EEEEeeCCCCC-CCCeeeCHHHHhhccccccccccccCcEEEEEEEEEeecccCCceEEEEecCCCCCcEEEEEEEEcCC
Q 025810           93 YVVVTDYGEGD-DTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGG  171 (247)
Q Consensus        93 ~V~V~D~Cp~~-~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~~~g~ni~~~v~~gS~~~~w~a~~i~n~gg  171 (247)
                      +|.|||+.|+. .+.|||||.||.+|+       ++.+|+|+|+||.|+-|.+| |+.+++|||| +.||.++|++||  
T Consensus        90 TVYVTDlYPegasGaLDLSpNAFakIG-------nm~qGrIpvqWrvv~aPvtG-N~~YRiKeGS-s~WWAAIQVRnH--  158 (232)
T COG4305          90 TVYVTDLYPEGASGALDLSPNAFAKIG-------NMKQGRIPVQWRVVKAPVTG-NFTYRIKEGS-SRWWAAIQVRNH--  158 (232)
T ss_pred             EEEEecccccccccccccChHHHhhhc-------chhcCccceeEEEecccccc-cEEEEEecCC-ccceeeeeeecc--
Confidence            99999999986 599999999999999       57899999999999999999 9999999999 899999999999  


Q ss_pred             CcceEEEEEEecCCCCeEEcccccCceeecCCCCCCCeeEEEEEEecCCCEEEEEecccCCCCcC--CcEEe--cCCCCC
Q 025810          172 QNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKA--GVAYE--SAIQLA  247 (247)
Q Consensus       172 ~~~I~sVev~~~~~~~W~~m~R~~gn~W~~~~~~~gp~~lr~~vt~~~G~~~vv~~~vip~~w~~--g~~y~--t~~qF~  247 (247)
                      +.||.++|+.+  ++.|..|.+.+||+|...+...+|  |.+|.|++.| +.++  +.+|.--|.  .+.|.  +.+||+
T Consensus       159 ~yPV~KlE~~q--dg~WinlpK~dYNhFVgT~LG~~p--L~~RmTDIRG-~~l~--DtlP~Lpk~asSKaY~V~G~VQFs  231 (232)
T COG4305         159 KYPVMKLEYEQ--DGKWINLPKMDYNHFVGTNLGTGP--LKVRMTDIRG-KVLK--DTLPKLPKSASSKAYTVPGHVQFS  231 (232)
T ss_pred             cCceEEEEEec--CCeEeeccccccceeeccccCCCc--eEEEEeeccc-ceee--cccccccccccCCceeecceeecC
Confidence            99999999985  578999999999999876655666  6778889999 5443  346654432  33343  678885

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=99.96  E-value=3.2e-29  Score=199.43  Aligned_cols=113  Identities=30%  Similarity=0.554  Sum_probs=92.2

Q ss_pred             hHHHHHHHhhhhccccCCCceeEEEEEeCCCCCCCCCCcccCCCCCCCCCCCceEEEec-cccCCCCCCCceEEEEeCCC
Q 025810            6 YYLLSVVLLLPALCYSQFTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS-RLWNNGTGCGACYQVRCNVP   84 (247)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~g~aT~y~~~~~~g~~~GaCGy~~~~~~~~~~~~aA~s-~~~~~g~~CG~C~~V~c~~~   84 (247)
                      |.++.+++++.++..++    +|+||||++.     ..|||+ ++   .+++.++||+| .+|++|..||+||||+|.++
T Consensus         6 ~~~~~~~~~~~~~~~~~----~G~AT~Y~~~-----~~gAC~-~~---~~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~   72 (125)
T PLN03024          6 LIFSTVLVFLFSVSYAT----PGIATFYTSY-----TPSACY-RG---TSFGVMIAAASDSLWNNGRVCGKMFTVKCKGP   72 (125)
T ss_pred             HHHHHHHHHHhhhhccc----ceEEEEeCCC-----CCcccc-CC---CCCCCEeEEeCHHHcCCCcccCceEEEEECCC
Confidence            44444555555544443    4999999875     368994 43   24678999999 99999999999999999765


Q ss_pred             -----CcccCCcEEEEEeeCCC-CCCCCeeeCHHHHhhccccccccccccCcEEEEEEEE
Q 025810           85 -----EVCTDYGVYVVVTDYGE-GDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLR  138 (247)
Q Consensus        85 -----~~C~~~~v~V~V~D~Cp-~~~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~  138 (247)
                           .+|++++|+|+|+|+|| +|..|||||++||.+||+       .+.|+++|+|.+
T Consensus        73 ~~~~~~~c~gksV~V~VtD~CP~~C~~~~DLS~~AF~~iA~-------~~aG~v~V~y~~  125 (125)
T PLN03024         73 RNAVPHPCTGKSVTVKIVDHCPSGCASTLDLSREAFAQIAN-------PVAGIINIDYIP  125 (125)
T ss_pred             CccccccccCCeEEEEEEcCCCCCCCCceEcCHHHHHHhcC-------ccCCEEEEEEeC
Confidence                 37999999999999999 588999999999999995       468999999974

>PLN00115 pollen allergen group 3; Provisional

Probab=99.92  E-value=1.8e-24  Score=170.20  Aligned_cols=92  Identities=28%  Similarity=0.542  Sum_probs=80.9

Q ss_pred             CceEEEEecCCCCCcEEEEEEEEcCCCcceEEEEEEecCCCCeE-EcccccCceeecC--CCCCCCeeEEEEEEecCCCE
Q 025810          146 YNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWV-AMRRAFGAVFDIS--NPPPGAINLRFQVSGSAGLT  222 (247)
Q Consensus       146 ~ni~~~v~~gS~~~~w~a~~i~n~gg~~~I~sVev~~~~~~~W~-~m~R~~gn~W~~~--~~~~gp~~lr~~vt~~~G~~  222 (247)
                      ++|+|+|+++| |++||++++ |    ++|.+|||++.++..|+ +|+|+||++|+.+  .+++|||++||++  .+| +
T Consensus        24 ~~v~F~V~~gS-np~yL~ll~-~----~dI~~V~Ik~~g~~~W~~~M~rswGavW~~~s~~pl~GPlS~R~t~--~~G-~   94 (118)
T PLN00115         24 TEVTFKVGKGS-SSTSLELVT-N----VAISEVEIKEKGAKDWVDDLKESSTNTWTLKSKAPLKGPFSVRFLV--KGG-G   94 (118)
T ss_pred             CceEEEECCCC-CcceEEEEE-e----CCEEEEEEeecCCCcccCccccCccceeEecCCCCCCCceEEEEEE--eCC-C
Confidence            59999999999 899998765 3    47999999998888999 9999999999964  4789987766655  466 6


Q ss_pred             EEEEecccCCCCcCCcEEecCCCC
Q 025810          223 WVVANNAIPQIWKAGVAYESAIQL  246 (247)
Q Consensus       223 ~vv~~~vip~~w~~g~~y~t~~qF  246 (247)
                      +++++||||++||+|++|++++||
T Consensus        95 ~~va~nViPa~Wk~G~tY~s~vq~  118 (118)
T PLN00115         95 YRVVDDVIPESFKAGSVYKTGIQV  118 (118)
T ss_pred             EEEECceECCCCCCCCEEeccccC
Confidence            899999999999999999999998

>PF01357 Pollen_allerg_1: Pollen allergen; InterPro: IPR007117 Expansins are unusual proteins that mediate cell wall extension in plants []

Probab=99.90  E-value=3.6e-23  Score=153.77  Aligned_cols=80  Identities=45%  Similarity=0.825  Sum_probs=65.4

Q ss_pred             eEEEEecCCCCCcEEEEEEEEcCCCcceEEEEEEecCCCCeEEcccccCceeecC-CCCCCCeeEEEEEEecC-CCEEEE
Q 025810          148 LKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDIS-NPPPGAINLRFQVSGSA-GLTWVV  225 (247)
Q Consensus       148 i~~~v~~gS~~~~w~a~~i~n~gg~~~I~sVev~~~~~~~W~~m~R~~gn~W~~~-~~~~gp~~lr~~vt~~~-G~~~vv  225 (247)
                      |+|+|+++| ++|||+++|.|+||.++|++|||++.++.+|++|+|+||++|+.+ +++.+||+  ||+|+.+ | ++++
T Consensus         1 v~f~V~~gS-~~~~l~v~v~n~gG~gdi~~Vevk~~~s~~W~~m~r~wGa~W~~~~~~~~~pls--~Rvts~~~G-~~vv   76 (82)
T PF01357_consen    1 VRFTVKGGS-NPYYLAVLVKNVGGDGDIKAVEVKQSGSGNWIPMKRSWGAVWQIDSNPPGGPLS--FRVTSGDSG-QTVV   76 (82)
T ss_dssp             EEEEE-TT--BTTEEEEEEEECCTTS-EEEEEEEETTSSS-EE-EEECTTEEEEE-SS--SSEE--EEEEETTTS-EEEE
T ss_pred             CEEEECCCC-CCcEEEEEEEEcCCCccEEEEEEEeCCCCCceEeecCcCceEEECCCCcCCCEE--EEEEEcCCC-eEEE
Confidence            689999999 899999999999999999999999999999999999999999987 77888855  5557767 6 9999


Q ss_pred             EecccC
Q 025810          226 ANNAIP  231 (247)
Q Consensus       226 ~~~vip  231 (247)
                      ++||||
T Consensus        77 ~~nViP   82 (82)
T PF01357_consen   77 ADNVIP   82 (82)
T ss_dssp             EEEEE-
T ss_pred             EecccC
Confidence            999998

They are believed to act as a sort of chemical grease, allowing polymers to slide past one another by disrupting non-covalent hydrogen bonds that hold many wall polymers to one another. This process is not degradative and hence does not weaken the wall, which could otherwise rupture under internal pressure during growth. Sequence comparisons indicate at least four distinct expansin cDNAs in rice and at least six in Arabidopsis. The proteins are highly conserved in size and sequence (75-95% amino acid sequence similarity between any pairwise comparison), and phylogenetic trees indicate that this multigene family formed before the evolutionary divergence of monocotyledons and dicotyledons []. Sequence and motif analyses show no similarities to known functional domains that might account for expansin action on wall extension. It is thought that several highly-conserved tryptophans may function in expansin binding to cellulose, or other glycans. The high conservation of the family indicates that the mechanism by which expansins promote wall extensin tolerates little variation in protein structure. Grass pollens, such as pollen from timothy grass, represent a major cause of type I allergy []. Interestingly, expansins share a high degree of sequence similarity with the Lol p I family of allergens. This entry represents the C-terminal domain.; PDB: 2VXQ_A 1WHP_A 1BMW_A 1WHO_A 2HCZ_X 2JNZ_A 3FT9_A 3FT1_C 1N10_B.

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.86  E-value=2.6e-22  Score=150.61  Aligned_cols=70  Identities=37%  Similarity=0.753  Sum_probs=62.3

Q ss_pred             EEEec-cccCCCCCCCceEEEEeC-CCCcccC-CcEEEEEeeCCCCC--------------CCCeeeCHHHHhhcccccc
Q 025810           60 VAGVS-RLWNNGTGCGACYQVRCN-VPEVCTD-YGVYVVVTDYGEGD--------------DTDFVLSPRAFGRMALVDK  122 (247)
Q Consensus        60 ~aA~s-~~~~~g~~CG~C~~V~c~-~~~~C~~-~~v~V~V~D~Cp~~--------------~~~~DLS~~aF~~ia~~~~  122 (247)
                      +||+| .||++|++||+||||+|. ++++|.+ ++|+|+|||+||.+              +.|||||++||.+||.   
T Consensus         1 taA~s~~lf~~G~~CG~Cy~v~C~~~~~~C~~~~~V~V~vtd~CP~~~~~~~~~~~~C~~~~~hfDLS~~AF~~iA~---   77 (87)
T smart00837        1 TAALSTALFNNGASCGACYEIMCVDSPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIAQ---   77 (87)
T ss_pred             CcccCHHHccCCccccceEEEEeCCCCCcccCCCeEEEEEeccCCccccccccCCCccCCCCcCeEcCHHHHHHHhh---
Confidence            47999 999999999999999996 5668986 48999999999962              5899999999999994   


Q ss_pred             ccccccCcEEEEEE
Q 025810          123 SEELYTFGVVDVEF  136 (247)
Q Consensus       123 ~~~~~~~G~~~i~w  136 (247)
                          ++.|+|+|+|
T Consensus        78 ----~~~Gvi~v~y   87 (87)
T smart00837       78 ----YKAGIVPVKY   87 (87)
T ss_pred             ----hcCCEEeeEC
Confidence                5799999987

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.79  E-value=1.3e-19  Score=133.05  Aligned_cols=70  Identities=40%  Similarity=0.623  Sum_probs=58.8

Q ss_pred             EEEec-cccCCCCCCCceEEEEeC--CCCc--ccC--CcEEEEEeeCCCCCC-CCeeeCHHHHhhccccccccccccCcE
Q 025810           60 VAGVS-RLWNNGTGCGACYQVRCN--VPEV--CTD--YGVYVVVTDYGEGDD-TDFVLSPRAFGRMALVDKSEELYTFGV  131 (247)
Q Consensus        60 ~aA~s-~~~~~g~~CG~C~~V~c~--~~~~--C~~--~~v~V~V~D~Cp~~~-~~~DLS~~aF~~ia~~~~~~~~~~~G~  131 (247)
                      +||++ .+|++|..||+||+++|.  ....  |..  ++|+|+|+|+||+|. .|||||+.||++|+.       ++.|+
T Consensus         1 t~a~~~~~y~~g~~cG~~~~~~~~~~a~~~~~~~~~~ksV~v~V~D~Cp~~~~~~lDLS~~aF~~la~-------~~~G~   73 (78)
T PF03330_consen    1 TAAGSATWYDNGTACGQCYQVTCLTAASATGTCKVGNKSVTVTVVDRCPGCPPNHLDLSPAAFKALAD-------PDAGV   73 (78)
T ss_dssp             EEEE-HHHHGGGTTTT-EEEEEE---SSTT--BESEECEEEEEEEEE-TTSSSSEEEEEHHHHHHTBS-------TTCSS
T ss_pred             CeEEEhhhcCCCCcCCCeeeccccccCCccceEEecCCeEEEEEEccCCCCcCCEEEeCHHHHHHhCC-------CCceE
Confidence            58999 999999999999999993  2323  777  999999999999975 999999999999995       57999


Q ss_pred             EEEEE
Q 025810          132 VDVEF  136 (247)
Q Consensus       132 ~~i~w  136 (247)
                      ++|+|
T Consensus        74 i~V~w   78 (78)
T PF03330_consen   74 IPVEW   78 (78)
T ss_dssp             EEEEE
T ss_pred             EEEEC
Confidence            99999

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=99.07  E-value=1.2e-10  Score=90.26  Aligned_cols=63  Identities=25%  Similarity=0.437  Sum_probs=46.0

Q ss_pred             CCCCCceEEEEeCCCCcccCCcEEEEEeeCCCCCCCCeeeCHHHHhhccccccccccccCcEEEEEEEEEee
Q 025810           70 GTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPC  141 (247)
Q Consensus        70 g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C  141 (247)
                      -..||+|++||.+.    ++.+++|+|+|+|+.+  +|||.+.+|++|-..+.   ....|.+.|+|++|+|
T Consensus        57 q~~CGkClrVTNt~----tga~~~~RIVDqCsnG--GLDld~~vF~~iDtdG~---G~~~Ghl~V~y~fV~C  119 (119)
T PF00967_consen   57 QDSCGKCLRVTNTA----TGAQVTVRIVDQCSNG--GLDLDPTVFNQIDTDGQ---GYAQGHLIVDYEFVDC  119 (119)
T ss_dssp             GGGTT-EEEEE-TT----T--EEEEEEEEE-SSS--SEES-SSSHHHH-SSSH---HHHHTEEEEEEEEE--
T ss_pred             cccccceEEEEecC----CCcEEEEEEEEcCCCC--CcccChhHHhhhccCCc---ccccceEEEEEEEEcC
Confidence            36899999999654    4778999999999966  99999999999975432   3578999999999998

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=98.32  E-value=3.7e-06  Score=66.47  Aligned_cols=70  Identities=23%  Similarity=0.484  Sum_probs=49.7

Q ss_pred             CceEEEec--cccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCCCCCCeeeCHHHHhhccccccccccccCcEEEE
Q 025810           57 DANVAGVS--RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDV  134 (247)
Q Consensus        57 ~~~~aA~s--~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i  134 (247)
                      --+|.+..  .-|+ +..||.|+|++-      ++++|.|..+|.-+   ..|+|+.+||+.|.+..    ....|+|++
T Consensus        42 Fp~IGg~~~V~gWn-S~~CGtC~~lty------~g~si~vlaID~a~---~gfnis~~A~n~LT~g~----a~~lG~V~a  107 (119)
T PF07249_consen   42 FPYIGGAPAVAGWN-SPNCGTCWKLTY------NGRSIYVLAIDHAG---GGFNISLDAMNDLTNGQ----AVELGRVDA  107 (119)
T ss_dssp             TTSEEEETT--STT--TTTT-EEEEEE------TTEEEEEEEEEE-S---SSEEE-HHHHHHHHTS-----CCCC-EEE-
T ss_pred             CCeeccccccccCC-CCCCCCeEEEEE------CCeEEEEEEEecCC---CcccchHHHHHHhcCCc----ccceeEEEE
Confidence            34677777  6675 578999999996      26899999999843   46999999999998642    235899999


Q ss_pred             EEEEEe
Q 025810          135 EFLRVP  140 (247)
Q Consensus       135 ~w~~V~  140 (247)
                      ++++|+
T Consensus       108 ~~~qV~  113 (119)
T PF07249_consen  108 TYTQVD  113 (119)
T ss_dssp             EEEEE-
T ss_pred             EEEEcC
Confidence            999996

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>TIGR00413 rlpA rare lipoprotein A

Probab=97.88  E-value=0.00017  Score=62.07  Aligned_cols=95  Identities=23%  Similarity=0.126  Sum_probs=68.6

Q ss_pred             EEEEEeCCCCCCCCCCcccCCCCCCCCCCCceEEEeccccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCCC-CCC
Q 025810           28 SRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGD-DTD  106 (247)
Q Consensus        28 g~aT~y~~~~~~g~~~GaCGy~~~~~~~~~~~~aA~s~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~-~~~  106 (247)
                      |.|+|||..-. | ...|.|-.- +.   ..++||-..     ...|..++|+...    ++++|+|+|.|++|-- ..-
T Consensus         1 G~ASwYg~~f~-G-~~TAnGe~y-~~---~~~tAAHkt-----LPlgT~V~VtNl~----ngrsviVrVnDRGPf~~gRi   65 (208)
T TIGR00413         1 GLASWYGPKFH-G-RKTANGEVY-NM---KALTAAHKT-----LPFNTYVKVTNLH----NNRSVIVRINDRGPFSDDRI   65 (208)
T ss_pred             CEEeEeCCCCC-C-CcCCCCeec-CC---Ccccccccc-----CCCCCEEEEEECC----CCCEEEEEEeCCCCCCCCCE
Confidence            67999986411 1 234444321 10   234544333     3789999999765    4789999999999974 478


Q ss_pred             eeeCHHHHhhccccccccccccCcEEEEEEEEEeeccc
Q 025810          107 FVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFR  144 (247)
Q Consensus       107 ~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~~~  144 (247)
                      +|||+.|+.+|+       ....|+.+|+.+.+.....
T Consensus        66 IDLS~aAA~~Lg-------~~~~G~a~V~vevl~~~~~   96 (208)
T TIGR00413        66 IDLSHAAAREIG-------LISRGVGQVRIEVLHVAKN   96 (208)
T ss_pred             EECCHHHHHHcC-------CCcCceEEEEEEEEecCCC
Confidence            999999999999       5679999999999987653

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>PRK10672 rare lipoprotein A; Provisional

Probab=97.27  E-value=0.003  Score=58.71  Aligned_cols=91  Identities=19%  Similarity=0.106  Sum_probs=60.6

Q ss_pred             eEEEEEeCCCCCCCCCCcccCCCCCCCCCCCceEEEeccccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCCC-CC
Q 025810           27 SSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGD-DT  105 (247)
Q Consensus        27 ~g~aT~y~~~~~~g~~~GaCGy~~~~~~~~~~~~aA~s~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~-~~  105 (247)
                      .|.|+|||..-. | ...|.|-.- +   ...++||-..     ..-|..++|+...    ++++|+|+|.|++|-- ..
T Consensus        80 ~G~ASwYg~~f~-G-~~TA~Ge~~-~---~~~~tAAH~t-----LPlps~vrVtNl~----ngrsvvVrVnDRGP~~~gR  144 (361)
T PRK10672         80 AGLAAIYDAEAG-S-NLTASGERF-D---PNALTAAHPT-----LPIPSYVRVTNLA----NGRMIVVRINDRGPYGPGR  144 (361)
T ss_pred             EEEEEEeCCccC-C-CcCcCceee-c---CCcCeeeccC-----CCCCCEEEEEECC----CCcEEEEEEeCCCCCCCCC
Confidence            788888886421 1 112332110 1   0234544332     3578889999765    4889999999999975 47


Q ss_pred             CeeeCHHHHhhccccccccccccCcEEEEEEEEE
Q 025810          106 DFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRV  139 (247)
Q Consensus       106 ~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V  139 (247)
                      -+|||..|+.+|+.       ...+.+.|+.-.|
T Consensus       145 iiDLS~aAA~~Lg~-------~~~~~V~ve~i~v  171 (361)
T PRK10672        145 VIDLSRAAADRLNT-------SNNTKVRIDPIIV  171 (361)
T ss_pred             eeEcCHHHHHHhCC-------CCCceEEEEEEee
Confidence            89999999999994       3456777777666

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=97.24  E-value=0.0011  Score=58.08  Aligned_cols=59  Identities=19%  Similarity=0.087  Sum_probs=50.2

Q ss_pred             CCceEEEEeCCCCcccCCcEEEEEeeCCCCC-CCCeeeCHHHHhhccccccccccccCcEEEEEEEEEeec
Q 025810           73 CGACYQVRCNVPEVCTDYGVYVVVTDYGEGD-DTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCR  142 (247)
Q Consensus        73 CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~-~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~  142 (247)
                      =|.-.+|+..+    ++++|+|+|.|++|-- ...+|||..|+++|+       ..+.|+.+|+.+++.+.
T Consensus       119 ~~t~v~VtNl~----NgrsvvVRINDRGPf~~gRiIDlS~aAA~~l~-------~~~~G~a~V~i~~l~~~  178 (233)
T COG0797         119 LPTYVRVTNLD----NGRSVVVRINDRGPFVSGRIIDLSKAAADKLG-------MIRSGVAKVRIEVLGVA  178 (233)
T ss_pred             CCCEEEEEEcc----CCcEEEEEEeCCCCCCCCcEeEcCHHHHHHhC-------CccCceEEEEEEEeccc
Confidence            45677898765    4789999999999974 478999999999999       45799999999999876

>PF02015 Glyco_hydro_45: Glycosyl hydrolase family 45; InterPro: IPR000334 O-Glycosyl hydrolases 3

Probab=90.56  E-value=0.26  Score=42.36  Aligned_cols=52  Identities=23%  Similarity=0.294  Sum_probs=31.8

Q ss_pred             EEEec-cccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCC-CCCCeeeCHH
Q 025810           60 VAGVS-RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEG-DDTDFVLSPR  112 (247)
Q Consensus        60 ~aA~s-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~-~~~~~DLS~~  112 (247)
                      +||.+ .-..+...|++|||++=++.+ -++|+.+|+|++.=-. ..+||||...
T Consensus        70 faA~~~~G~~e~~~Cc~Cy~LtFt~g~-l~GKkmiVQ~tNtG~dlg~n~FDl~iP  123 (201)
T PF02015_consen   70 FAAASITGGSESSWCCACYELTFTSGP-LKGKKMIVQVTNTGGDLGSNQFDLAIP  123 (201)
T ss_dssp             EEEEE-TT--HHHHTT-EEEEEE-SST-TTT-EEEEEEEEE-TTTTTTEEEEE-T
T ss_pred             eeeeeecCCCCCCcccceEEEEEcCCC-cCCCEeEEEecccCCCCCCCeEEEEeC
Confidence            55665 433344779999999976521 3578899999987644 4589998644

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 45 GH45 from CAZY comprises enzymes with only one known activity; endoglucanase (3.2.1.4 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases, cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produce a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family K or as the glycosyl hydrolases family 45 []. The best conserved regions in these enzymes is located in the N-terminal section. It contains an aspartic acid residue which has been shown [] to act as a nucleophile in the catalytic mechanism. This also has several cysteines that are involved in forming disulphide bridges.; GO: 0008810 cellulase activity, 0005975 carbohydrate metabolic process; PDB: 1OA7_A 1OA9_A 1L8F_A 1HD5_A 4ENG_A 3ENG_A 2ENG_A.

>PF03404 Mo-co_dimer: Mo-co oxidoreductase dimerisation domain; InterPro: IPR005066 The majority of molybdenum-containing enzymes utilise a molybdenum cofactor (MoCF or Moco) consisting of a Mo atom coordinated via a cis-dithiolene moiety to molybdopterin (MPT)

Probab=88.20  E-value=0.93  Score=36.38  Aligned_cols=50  Identities=18%  Similarity=0.387  Sum_probs=33.6

Q ss_pred             CCc-ceEEEEEEecCCCCeEEcccccCc-------------eeecC--CC-CCCCeeEEEEEEecCC
Q 025810          171 GQN-DVLAVEMWQEDCKDWVAMRRAFGA-------------VFDIS--NP-PPGAINLRFQVSGSAG  220 (247)
Q Consensus       171 g~~-~I~sVev~~~~~~~W~~m~R~~gn-------------~W~~~--~~-~~gp~~lr~~vt~~~G  220 (247)
                      |.+ +|+.|||..+++.+|++.+...-.             .|++.  -+ +.|...|.+|-++..|
T Consensus        38 g~g~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~g~~~~aW~~W~~~~~~~~~~G~~~i~~RA~D~~G  104 (131)
T PF03404_consen   38 GGGRGIARVEVSTDGGKTWQEATLDGPESPPRYGEARWAWRLWEYDWPPPSLPGEYTIMVRATDESG  104 (131)
T ss_dssp             STT--EEEEEEESSTTSSEEE-EEESTSCCCHHTS-TTS-EEEEEEEEECSHCCEEEEEEEEEETTS
T ss_pred             CCCcceEEEEEEeCCCCCcEEeEeccCCCcccccccCcccceeeeccCcCccccceEEEEEEeeccc
Confidence            344 999999999888999976643211             35542  22 2578888888888887

MoCF is ubiquitous in nature, and the pathway for MoCF biosynthesis is conserved in all three domains of life. MoCF-containing enzymes function as oxidoreductases in carbon, nitrogen, and sulphur metabolism [, ]. In Escherichia coli, biosynthesis of MoCF is a three stage process. It begins with the MoaA and MoaC conversion of GTP to the meta-stable pterin intermediate precursor Z. The second stage involves MPT synthase (MoaD and MoaE), which converts precursor Z to MPT; MoeB is involved in the recycling of MPT synthase. The final step in MoCF synthesis is the attachment of mononuclear Mo to MPT, a process that requires MoeA and which is enhanced by MogA in an Mg2 ATP-dependent manner []. MoCF is the active co-factor in eukaryotic and some prokaryotic molybdo-enzymes, but the majority of bacterial enzymes requiring MoCF, need a modification of MTP for it to be active; MobA is involved in the attachment of a nucleotide monophosphate to MPT resulting in the MGD co-factor, the active co-factor for most prokaryotic molybdo-enzymes. Bacterial two-hybrid studies have revealed the close interactions between MoeA, MogA, and MobA in the synthesis of MoCF []. Moreover the close functional association of MoeA and MogA in the synthesis of MoCF is supported by fact that the known eukaryotic homologues to MoeA and MogA exist as fusion proteins: CNX1 (Q39054 from SWISSPROT) of Arabidopsis thaliana (Mouse-ear cress), mammalian Gephryin (e.g. Q9NQX3 from SWISSPROT) and Drosophila melanogaster (Fruit fly) Cinnamon (P39205 from SWISSPROT) []. This domain is found in molybdopterin cofactor oxidoreductases, such as in the C-terminal of Mo-containing sulphite oxidase, which catalyses the conversion of sulphite to sulphate, the terminal step in the oxidative degradation of cysteine and methionine []. This domain is involved in dimer formation, and has an Ig-fold structure [].; GO: 0016491 oxidoreductase activity, 0030151 molybdenum ion binding, 0055114 oxidation-reduction process; PDB: 2C9X_A 2CA3_A 2BLF_A 2CA4_A 2BPB_A 2XTS_C 2BII_A 2BIH_A 1OGP_A 2A9A_B ....

>cd02110 SO_family_Moco_dimer Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain

Probab=83.51  E-value=2.6  Score=38.73  Aligned_cols=50  Identities=22%  Similarity=0.420  Sum_probs=36.6

Q ss_pred             CCcceEEEEEEecCCCCeEEcccccC----c---eeecC-CCCCCCeeEEEEEEecCC
Q 025810          171 GQNDVLAVEMWQEDCKDWVAMRRAFG----A---VFDIS-NPPPGAINLRFQVSGSAG  220 (247)
Q Consensus       171 g~~~I~sVev~~~~~~~W~~m~R~~g----n---~W~~~-~~~~gp~~lr~~vt~~~G  220 (247)
                      |..+|+.|||..+++.+|++..-...    -   .|+.. .+.+|...|.+|.++..|
T Consensus       234 g~~~I~rVEvS~DgG~tW~~A~l~~~~~~~~~W~~W~~~~~~~~G~~~l~vRA~D~~g  291 (317)
T cd02110         234 GGRGIRRVEVSLDGGRTWQEARLEGPLAGPRAWRQWELDWDLPPGEYELVARATDSTG  291 (317)
T ss_pred             CCCCEEEEEEEeCCCCcceEeEccCCcCCCCEEEEEEEEEEcCCCcEEEEEEEECCCC
Confidence            44689999999988889997654321    1   45443 234688899999999888

This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO).

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	247
1n10_A	241	Crystal Structure Of Phl P 1, A Major Timothy Grass		2e-23
2hcz_X	245	Crystal Structure Of Expb1 (Zea M 1), A Beta-Expans		1e-20

>pdb|1N10|A Chain A, Crystal Structure Of Phl P 1, A Major Timothy Grass Pollen Allergen Length = 241

Iteration: 1
 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 20/228 (8%)
Query: 27  SSRASFYGSPDGLGTP--AGACGFGAYGKTVNDANVAGVS-----RLWNNGTGCGACYQV 79
            +++++YG P G G     GACG+    K V+    +G++      ++ +G GCG+C+++
Sbjct: 21  DAKSTWYGKPTGAGPKDNGGACGY----KDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEI 76
Query: 80  RCNVPEXXXXXXXXXXXXXXXXXXXX--XFVLSPRAFGRMALVDKSEELYTFGVVDVEFL 137
           +C  PE                       F LS  AFG MA     ++L + G ++++F 
Sbjct: 77  KCTKPEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFR 136
Query: 138 RVPCRF-RGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFG 196
           RV C++  G  + F V + S  P YLA+ + YV G  DV+AV++ ++    W+ ++ ++G
Sbjct: 137 RVKCKYPEGTKVTFHVEKGSN-PNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWG 195
Query: 197 AVFDISNPPP--GAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYES 242
           A++ I  P    G   +R+   G    T   A + IP+ WKA  +YES
Sbjct: 196 AIWRIDTPDKLTGPFTVRYTTEGG---TKTEAEDVIPEGWKADTSYES 240

>pdb|2HCZ|X Chain X, Crystal Structure Of Expb1 (Zea M 1), A Beta-Expansin And Group-1 Pollen Allergen From Maize Length = 245

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%)
Query: 25  FTSSRASFYGSPDGLGTP--AGACGFGAYGKTVNDANVAGVSR-----LWNNGTGCGACY 77
           + ++RA++YG P+G G P   GACG     K VN    +G++      ++ +G GCG+CY
Sbjct: 19  WLTARATWYGQPNGAGAPDNGGACGI----KNVNLPPYSGMTACGNVPIFKDGKGCGSCY 74
Query: 78  QVRCN-VPE-XXXXXXXXXXXXXXXXXXXXXFVLSPRAFGRMALVDKSEELYTFGVVDVE 135
           +VRC   PE                      F LS +AFG +A    ++++   G++DVE
Sbjct: 75  EVRCKEKPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVE 134
Query: 136 FLRVPCRF-RGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRA 194
           F RV C++  G  + F + +    P YLAV + YV    D++ +E+  +   +W  M+ +
Sbjct: 135 FRRVRCKYPAGQKIVFHIEKGCN-PNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLS 193
Query: 195 FGAVF--DISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQL 246
           +GA++  D +    G  ++R     S     V+A + IP  W+    Y S +Q 
Sbjct: 194 WGAIWRMDTAKALKGPFSIRLT---SESGKKVIAKDVIPANWRPDAVYTSNVQF 244

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	247
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	7e-54
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	1e-53
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	3e-28
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	4e-24
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	2e-22
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	6e-19

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays} Length = 245

 Score =  173 bits (438), Expect = 7e-54
 Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 6/226 (2%)

Query: 25  FTSSRASFYGSPDGLGTP--AGACGFGAYGKTVNDANVAGVSR-LWNNGTGCGACYQVRC 81
           + ++RA++YG P+G G P   GACG             A  +  ++ +G GCG+CY+VRC
Sbjct: 19  WLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRC 78

Query: 82  NVPEVCTDYGVYVVVTD--YGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRV 139
                C+   V V +TD  Y       F LS +AFG +A    ++++   G++DVEF RV
Sbjct: 79  KEKPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRV 138

Query: 140 PCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVF 199
            C++          E    P YLAV + YV    D++ +E+  +   +W  M+ ++GA++
Sbjct: 139 RCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 198

Query: 200 DISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQ 245
            +            +++  +G   V+A + IP  W+    Y S +Q
Sbjct: 199 RMDTAKALKGPFSIRLTSESG-KKVIAKDVIPANWRPDAVYTSNVQ 243

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3 Length = 241

 Score =  172 bits (436), Expect = 1e-53
 Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 6/223 (2%)

Query: 25  FTSSRASFYGSPDGLGT--PAGACGFGAYGKTVNDANVAGVSR-LWNNGTGCGACYQVRC 81
           +  +++++YG P G G     GACG+    K          +  ++ +G GCG+C++++C
Sbjct: 19  WLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKC 78

Query: 82  NVPEVCTDYGVYVVVTD--YGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRV 139
             PE C+   V V +TD          F LS  AFG MA     ++L + G ++++F RV
Sbjct: 79  TKPEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRV 138

Query: 140 PCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVF 199
            C++          E    P YLA+ + YV G  DV+AV++ ++    W+ ++ ++GA++
Sbjct: 139 KCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIW 198

Query: 200 DISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYES 242
            I  P         + +   G T   A + IP+ WKA  +YES
Sbjct: 199 RIDTPDKLTGPFTVRYTTEGG-TKTEAEDVIPEGWKADTSYES 240

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score =  105 bits (264), Expect = 3e-28
 Identities = 40/225 (17%), Positives = 75/225 (33%), Gaps = 33/225 (14%)

Query: 27  SSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGT----GCGACYQVRCN 82
              A++ GS        GA         +     A      N G       G+  +V   
Sbjct: 8   EGYATYTGSGYS----GGAFLLDPIPSDME--ITAINPADLNYGGVKAALAGSYLEVEGP 61

Query: 83  VPEVCTDYGVYVVVTD-YGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPC 141
             +        V VTD Y EG      LSP AF ++  +         G +++++  V  
Sbjct: 62  KGKT------TVYVTDLYPEGARGALDLSPNAFRKIGNMKD-------GKINIKWRVVKA 108

Query: 142 RFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDI 201
              G N  +++ E S    + A+       +  V+ +E  ++    W+ M +     F  
Sbjct: 109 PITG-NFTYRIKEGSS-RWWAAI--QVRNHKYPVMKMEYEKD--GKWINMEKMDYNHFVS 162

Query: 202 SNPPPGAINLRFQVSGSAGLTWVVANNAIPQI-WKAGVAYESAIQ 245
           +N   G+  L+ +++   G         +P+            +Q
Sbjct: 163 TNLGTGS--LKVRMTDIRGKVVKDTIPKLPESGTSKAYTVPGHVQ 205

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} PDB: 3ft9_A Length = 100

 Score = 91.8 bits (228), Expect = 4e-24
 Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 3/101 (2%)

Query: 145 GYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNP 204
              + F V + S  P+ L + + Y    + +  VE+ Q   ++W  + +  G V+++ + 
Sbjct: 1   AVQVTFTVQKGSD-PKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSS 58

Query: 205 PPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQ 245
            P      F+     G+   V +  IP  +  G  Y+   Q
Sbjct: 59  KPLVGPFNFRFMSKGGMRN-VFDEVIPTAFSIGKTYKPEEQ 98

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense} Length = 108

 Score = 87.6 bits (217), Expect = 2e-22
 Identities = 20/107 (18%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 136 FLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAF 195
                       + F V + S  P+ L + + Y    + +  VE+ Q   ++W  + +  
Sbjct: 7   HHHGSAV----QVTFTVQKGSD-PKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK- 60

Query: 196 GAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYES 242
           G V+++ +  P      F+     G+   V +  IP  +  G  Y+ 
Sbjct: 61  GNVWEVKSSKPLVGPFNFRFMSKGGMRN-VFDEVIPTAFSIGKTYKP 106

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A Length = 96

 Score = 78.0 bits (192), Expect = 6e-19
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 147 NLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPP 206
            + F V + S   ++LAV + Y G    +  VE+ +    +WVAM +  G V+   +  P
Sbjct: 3   KVTFTVEKGSN-EKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEP 59

Query: 207 GAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYES 242
                 F+     G+   V ++ +P+ +  G  Y  
Sbjct: 60  LQGPFNFRFLTEKGMK-NVFDDVVPEKYTIGATYAP 94

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	247
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	100.0
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	100.0
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	100.0
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	99.96
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	99.94
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	99.94
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	99.91
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.69
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.32
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	98.24
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	98.14
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	98.12
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	98.09
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	98.08
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	97.65
2eng_A	210	Endoglucanase V; cellulose degradation, hydrolase	93.76

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=100.00  E-value=9.7e-67  Score=457.88  Aligned_cols=224  Identities=29%  Similarity=0.623  Sum_probs=204.4

Q ss_pred             cccCCCceeEEEEEeCCCCCCCC--CCcccCCCCCCCCCCCceEEEec-cccCCCCCCCceEEEEeCCCCcccCCcEEEE
Q 025810           19 CYSQFTFTSSRASFYGSPDGLGT--PAGACGFGAYGKTVNDANVAGVS-RLWNNGTGCGACYQVRCNVPEVCTDYGVYVV   95 (247)
Q Consensus        19 ~~~~~~~~~g~aT~y~~~~~~g~--~~GaCGy~~~~~~~~~~~~aA~s-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~   95 (247)
                      ..++++|+.|+||||+++++.|+  .+|||||++++.+|++.++||+| .+|++|+.||+||||+|.+++.|++++|+|+
T Consensus        13 ~~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~~C~~~sv~V~   92 (245)
T 2hcz_X           13 TNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVY   92 (245)
T ss_dssp             SCCCCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSSSBCSSCEEEE
T ss_pred             cccCCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCCccCCCCEEEE
Confidence            44577899999999999987776  68999999988888999999999 9999999999999999988888999999999


Q ss_pred             EeeCCCC--CCCCeeeCHHHHhhccccccccccccCcEEEEEEEEEeecccC-CceEEEEecCCCCCcEEEEEEEEcCCC
Q 025810           96 VTDYGEG--DDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRG-YNLKFKVHENSKYPQYLAVSMLYVGGQ  172 (247)
Q Consensus        96 V~D~Cp~--~~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~~~g-~ni~~~v~~gS~~~~w~a~~i~n~gg~  172 (247)
                      |||+||.  +.+|||||+.||.+||++++++++++.|+++|+||||+|+++| .||+|+|+++| ++||++|+|.|++|.
T Consensus        93 VtD~C~C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs-~~~~~avlv~n~~g~  171 (245)
T 2hcz_X           93 ITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGC-NPNYLAVLVKYVADD  171 (245)
T ss_dssp             EEEECCCTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCC-SSSCCCEEEECCCTT
T ss_pred             EEeccCCCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCC-CcceEEEEEEecCCC
Confidence            9999986  4599999999999999988777778999999999999999983 48999999999 799999999999999


Q ss_pred             cceEEEEEEecCCCCeEEcccccCceeecCCC--CCCCeeEEEEEEecCCCEEEEEecccCCCCcCCcEEecCCCC
Q 025810          173 NDVLAVEMWQEDCKDWVAMRRAFGAVFDISNP--PPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESAIQL  246 (247)
Q Consensus       173 ~~I~sVev~~~~~~~W~~m~R~~gn~W~~~~~--~~gp~~lr~~vt~~~G~~~vv~~~vip~~w~~g~~y~t~~qF  246 (247)
                      ++|++|||+++++..|++|+|+|||+|+.+..  +.+||  +||||+.+| |+|+++||||++|++|++|++.+||
T Consensus       172 g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~gpl--s~RvT~~~G-~~v~~~nViP~~w~~g~ty~~~~qf  244 (245)
T 2hcz_X          172 GDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPF--SIRLTSESG-KKVIAKDVIPANWRPDAVYTSNVQF  244 (245)
T ss_dssp             CCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCSSC--CEEEEETTS-CEEEESCSCCSSCCTTCEEECSCCC
T ss_pred             CCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCCCE--EEEEEEeCC-cEEEEeeeecCCCCCCCEEeCcccc
Confidence            99999999987777999999999999998764  67874  556677888 8999999999999999999999999

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=100.00  E-value=1.4e-65  Score=449.38  Aligned_cols=221  Identities=31%  Similarity=0.653  Sum_probs=194.5

Q ss_pred             cccCCCceeEEEEEeCCCCCCCC--CCcccCCCCCCCCCCCceEEEec-cccCCCCCCCceEEEEeCCCCcccCCcEEEE
Q 025810           19 CYSQFTFTSSRASFYGSPDGLGT--PAGACGFGAYGKTVNDANVAGVS-RLWNNGTGCGACYQVRCNVPEVCTDYGVYVV   95 (247)
Q Consensus        19 ~~~~~~~~~g~aT~y~~~~~~g~--~~GaCGy~~~~~~~~~~~~aA~s-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~   95 (247)
                      ..++++|+.|+||||+++++.|+  .+|||||++++.+|++.++||+| .+|++|+.||+||||+|.+++.|++++|+|+
T Consensus        13 ~~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~~C~~~~v~V~   92 (241)
T 1n10_A           13 ATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVH   92 (241)
T ss_dssp             CBCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEE
T ss_pred             CcccCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCCccCCCCEEEE
Confidence            34577899999999999887776  78999999988888999999999 9999999999999999988778999999999


Q ss_pred             EeeCCCC--CCCCeeeCHHHHhhccccccccccccCcEEEEEEEEEeecccC-CceEEEEecCCCCCcEEEEEEEEcCCC
Q 025810           96 VTDYGEG--DDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRG-YNLKFKVHENSKYPQYLAVSMLYVGGQ  172 (247)
Q Consensus        96 V~D~Cp~--~~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~~~g-~ni~~~v~~gS~~~~w~a~~i~n~gg~  172 (247)
                      |||+|+.  +..|||||+.||.+||++++++++++.|+++|+||+|+|+++| .||+|+|+++| ++||++|+|.|++|.
T Consensus        93 VtD~C~C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs-~~~~~~vlv~n~~g~  171 (241)
T 1n10_A           93 ITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGS-NPNYLALLVKYVNGD  171 (241)
T ss_dssp             EEEECSSCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTC-BTTEEEEEEECCCCS
T ss_pred             EeEecCCCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCC-CcceEEEEEEecCCC
Confidence            9999864  4689999999999999988777778999999999999999984 68999999999 799999999999999


Q ss_pred             cceEEEEEEecCCCCeEEcccccCceeecCCC--CCCCeeEEEEEEecCCCEEEEEecccCCCCcCCcEEecC
Q 025810          173 NDVLAVEMWQEDCKDWVAMRRAFGAVFDISNP--PPGAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYESA  243 (247)
Q Consensus       173 ~~I~sVev~~~~~~~W~~m~R~~gn~W~~~~~--~~gp~~lr~~vt~~~G~~~vv~~~vip~~w~~g~~y~t~  243 (247)
                      ++|++|||+++++..|++|+|+|||+|+.+..  +.+|  |+||||+.+| |+|+++||||++|++|++|++.
T Consensus       172 g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~gp--ls~RvT~~~G-~~v~~~nViP~~w~~g~ty~~~  241 (241)
T 1n10_A          172 GDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGP--FTVRYTTEGG-TKTEAEDVIPEGWKADTSYESK  241 (241)
T ss_dssp             SCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCSC--EEEEEEESSS-CEEEEEEEECSSCCSSEEEEC-
T ss_pred             CCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCCC--EEEEEEEeCC-cEEEEccccCCCCCCCCEEeCC
Confidence            99999999987778999999999999998654  6776  6677777888 8999999999999999999973

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=100.00  E-value=1.2e-53  Score=367.09  Aligned_cols=194  Identities=20%  Similarity=0.294  Sum_probs=171.6

Q ss_pred             CCceeEEEEEeCCCCCCCCCCcccCCCCCCCCCCCceEEEec-cccCCC----CCCCceEEEEeCCCCcccCCcEEEEEe
Q 025810           23 FTFTSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVS-RLWNNG----TGCGACYQVRCNVPEVCTDYGVYVVVT   97 (247)
Q Consensus        23 ~~~~~g~aT~y~~~~~~g~~~GaCGy~~~~~~~~~~~~aA~s-~~~~~g----~~CG~C~~V~c~~~~~C~~~~v~V~V~   97 (247)
                      +..+.|+||||++..    .+||||+..   .|++.++||+| .+|++|    ..||+||||+|.      +++|+|+|+
T Consensus         4 ~~~~~G~aT~Y~~g~----~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~------~gsv~V~v~   70 (208)
T 3d30_A            4 DDLHEGYATYTGSGY----SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP------KGKTTVYVT   70 (208)
T ss_dssp             TCCEEEEEEECSTTS----SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET------TEEEEEEEE
T ss_pred             CCcEEEEEEEcCCCC----CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC------CCcEEEEEE
Confidence            467899999999853    589999863   35678999999 999987    899999999983      458999999


Q ss_pred             eCCCCCC-CCeeeCHHHHhhccccccccccccCcEEEEEEEEEeecccCCceEEEEecCCCCCcEEEEEEEEcCCCcceE
Q 025810           98 DYGEGDD-TDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVL  176 (247)
Q Consensus        98 D~Cp~~~-~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~~~g~ni~~~v~~gS~~~~w~a~~i~n~gg~~~I~  176 (247)
                      |+||+|. .|||||+.||.+||.       ++.|+++|+||+|+|+++| +|+|++++|| ++||++|+|.|++|  +|+
T Consensus        71 D~CP~C~~~~~DLS~~aF~~la~-------~~~G~i~v~~~~V~C~~~G-~i~f~v~~Gs-~~~~~~v~v~n~~g--~v~  139 (208)
T 3d30_A           71 DLYPEGARGALDLSPNAFRKIGN-------MKDGKINIKWRVVKAPITG-NFTYRIKEGS-SRWWAAIQVRNHKY--PVM  139 (208)
T ss_dssp             EECTTCCTTCEEECHHHHHHHSC-------GGGSSEEEEEEEECCCCCS-CCEEEECTTC-SSSEEEEEEESCSS--CEE
T ss_pred             ECCCCCCCCeEECCHHHHHHhcc-------cCCCEEEEEEEEeCCCCCC-ceeEEEcCCC-CCceEEEEEEecCC--CEE
Confidence            9999986 899999999999994       5799999999999999999 9999999999 89999999999954  999


Q ss_pred             EEEEEecCCCCeEEcccccCceeecCCCCCCCeeEEEEEEecCCCEEEEEecccCCCCcC----CcEEecCCCCC
Q 025810          177 AVEMWQEDCKDWVAMRRAFGAVFDISNPPPGAINLRFQVSGSAGLTWVVANNAIPQIWKA----GVAYESAIQLA  247 (247)
Q Consensus       177 sVev~~~~~~~W~~m~R~~gn~W~~~~~~~gp~~lr~~vt~~~G~~~vv~~~vip~~w~~----g~~y~t~~qF~  247 (247)
                      +|||+++  +.|++|+|+|+|+|..+.++.+|  ++||||+.+| |+|  .++||++|++    +.+|++++||.
T Consensus       140 ~v~i~~~--~~W~~m~r~~~n~~~~~~~~~~p--ls~rvT~~~G-~~v--~~vip~~w~~~~~~~~~~~~~~Qf~  207 (208)
T 3d30_A          140 KMEYEKD--GKWINMEKMDYNHFVSTNLGTGS--LKVRMTDIRG-KVV--KDTIPKLPESGTSKAYTVPGHVQFP  207 (208)
T ss_dssp             EEEEEET--TEEEEEEECTTSCEEEECCCSSS--EEEEEEETTC-CEE--EEEECCCCSSCCSSCEEEECCCCCC
T ss_pred             EEEEecC--CcEEEccccccceeecCCCCCCC--EEEEEEECCC-CEE--EEEECCCCccCcccceEEeCcCccC
Confidence            9999965  58999999999988776655566  6677788898 777  8999999997    89999999995

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A

Probab=99.96  E-value=8.1e-29  Score=188.96  Aligned_cols=96  Identities=24%  Similarity=0.492  Sum_probs=87.0

Q ss_pred             CceEEEEecCCCCCcEEEEEEEEcCCCcceEEEEEEecCCCCeEEcccccCceeecCC--CCCCCeeEEEEEEecCCCEE
Q 025810          146 YNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISN--PPPGAINLRFQVSGSAGLTW  223 (247)
Q Consensus       146 ~ni~~~v~~gS~~~~w~a~~i~n~gg~~~I~sVev~~~~~~~W~~m~R~~gn~W~~~~--~~~gp~~lr~~vt~~~G~~~  223 (247)
                      ++|+|+|+++| ++||++++|.|++|.++|.+|||+++++..|++|+| ||++|+.+.  ++.|||+  ||+|+.+| ++
T Consensus         2 ~~i~F~V~~gs-~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~GplS--fRvt~~~G-~~   76 (100)
T 3ft1_A            2 VQVTFTVQKGS-DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVGPFN--FRFMSKGG-MR   76 (100)
T ss_dssp             BEEEEEECTTC-BTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCSSEE--EEEEETTC-CE
T ss_pred             CCEEEEEecCC-CcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCCCEE--EEEEEcCC-cE
Confidence            48999999999 799999999999999999999999877778999999 999999865  7889755  55566788 89


Q ss_pred             EEEecccCCCCcCCcEEecCCCC
Q 025810          224 VVANNAIPQIWKAGVAYESAIQL  246 (247)
Q Consensus       224 vv~~~vip~~w~~g~~y~t~~qF  246 (247)
                      ++++||||++|++|++|++.+||
T Consensus        77 ~v~~nViPa~W~~G~ty~s~vq~   99 (100)
T 3ft1_A           77 NVFDEVIPTAFSIGKTYKPEEQE   99 (100)
T ss_dssp             EEEEEEECTTCCTTCEECCCCBC
T ss_pred             EEECeEeCCCCCCCcEEeccccc
Confidence            99999999999999999999998

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}

Probab=99.94  E-value=6.6e-27  Score=180.32  Aligned_cols=96  Identities=23%  Similarity=0.503  Sum_probs=86.1

Q ss_pred             cCCceEEEEecCCCCCcEEEEEEEEcCCCcceEEEEEEecCCCCeEEcccccCceeecCC--CCCCCeeEEEEEEecCCC
Q 025810          144 RGYNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISN--PPPGAINLRFQVSGSAGL  221 (247)
Q Consensus       144 ~g~ni~~~v~~gS~~~~w~a~~i~n~gg~~~I~sVev~~~~~~~W~~m~R~~gn~W~~~~--~~~gp~~lr~~vt~~~G~  221 (247)
                      .|+||.|+|+++| ++||++++|.|++|.++|++|||++.++..|++|+|+ |++|+.+.  +|.|||+  ||+|+.+| 
T Consensus        11 ~g~~v~f~V~~~s-np~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~GplS--fRvtts~G-   85 (108)
T 2jnz_A           11 SAVQVTFTVQKGS-DPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVGPFN--FRFMSKGG-   85 (108)
T ss_dssp             CCCEEEEEECTTC-CSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCSSEE--EEEEETTT-
T ss_pred             CCccEEEEEecCC-CccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCCCEE--EEEEEcCC-
Confidence            4679999999999 8999999999999999999999997677889999999 99999865  7889755  55566788 


Q ss_pred             EEEEEecccCCCCcCCcEEecCC
Q 025810          222 TWVVANNAIPQIWKAGVAYESAI  244 (247)
Q Consensus       222 ~~vv~~~vip~~w~~g~~y~t~~  244 (247)
                      +++++.||||++|++|++|++.+
T Consensus        86 ~~~va~nViPa~W~~Gqty~s~v  108 (108)
T 2jnz_A           86 MRNVFDEVIPTAFSIGKTYKPEE  108 (108)
T ss_dssp             EEEEEEEEECSSCCTTCEECCCC
T ss_pred             cEEEECeEECCCCCCCCEEeCCC
Confidence            99999999999999999999864

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=99.94  E-value=7.8e-28  Score=199.08  Aligned_cols=109  Identities=17%  Similarity=0.236  Sum_probs=91.8

Q ss_pred             CceeEEEEEeCCCCCCCCCCcccCCC-----CCCCCCCCceEEEec-cccCCC------CCCCceEEEEeCCCC------
Q 025810           24 TFTSSRASFYGSPDGLGTPAGACGFG-----AYGKTVNDANVAGVS-RLWNNG------TGCGACYQVRCNVPE------   85 (247)
Q Consensus        24 ~~~~g~aT~y~~~~~~g~~~GaCGy~-----~~~~~~~~~~~aA~s-~~~~~g------~~CG~C~~V~c~~~~------   85 (247)
                      .|+.++||||+..     .+|||||+     ++.+++++.++|||| +||++|      ..||+||||+|++..      
T Consensus        13 g~~~A~aT~Yg~~-----~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg~   87 (181)
T 1wc2_A           13 GKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGG   87 (181)
T ss_dssp             TEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCC
T ss_pred             CccccceeEecCC-----CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCcccccc
Confidence            5899999999986     58999999     455566789999999 999997      899999999997632      


Q ss_pred             ccc-CCcEEEEEeeCCCC-------C--------------CCCeeeCHHHHhhccccccccccccCcEEEEEEEEEeecc
Q 025810           86 VCT-DYGVYVVVTDYGEG-------D--------------DTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRF  143 (247)
Q Consensus        86 ~C~-~~~v~V~V~D~Cp~-------~--------------~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~~  143 (247)
                      +|. +++|+|||||.||.       |              +.||||++.| .+|+.       ...|+++|+||||+|+.
T Consensus        88 ~~~~g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~-------~~~GivpV~yrrV~C~~  159 (181)
T 1wc2_A           88 PVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTG-------MGWNNPETTWEVVNCDS  159 (181)
T ss_dssp             CCCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGG-------GTCSSEEEEEEEECHHH
T ss_pred             cCCCCCeEEEEEecCCCCCCCCCCccCCCcccCcccccCccccccccchH-HHhhh-------hcCCCceeEEEEEeCCC
Confidence            233 45899999999992       4              4699999999 88983       56899999999999987


Q ss_pred             cC
Q 025810          144 RG  145 (247)
Q Consensus       144 ~g  145 (247)
                      .+
T Consensus       160 ~~  161 (181)
T 1wc2_A          160 EH  161 (181)
T ss_dssp             HH
T ss_pred             CC
Confidence            44

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A

Probab=99.91  E-value=1.2e-26  Score=175.83  Aligned_cols=93  Identities=28%  Similarity=0.528  Sum_probs=81.5

Q ss_pred             CceEEEEecCCCCCcEEEEEEEEcCCCcceEEEEEEecCCCCeEEcccccCceeecCC--CCCCCeeEEEEEEecCCCEE
Q 025810          146 YNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISN--PPPGAINLRFQVSGSAGLTW  223 (247)
Q Consensus       146 ~ni~~~v~~gS~~~~w~a~~i~n~gg~~~I~sVev~~~~~~~W~~m~R~~gn~W~~~~--~~~gp~~lr~~vt~~~G~~~  223 (247)
                      ++|+|+|+++| ++||++++|.|++  ++|++|||++.++..|++|+|+||++|+.+.  ++.|||++||  |+.+| ++
T Consensus         2 ~~i~F~V~~gs-~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~GplSfRv--t~~~G-~~   75 (96)
T 1bmw_A            2 PKVTFTVEKGS-NEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQGPFNFRF--LTEKG-MK   75 (96)
T ss_dssp             CCCCCCCCTTC-SSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCCCCCBCC--EETTT-EE
T ss_pred             CCEEEEEecCC-CCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCCCEEEEE--EEcCC-cE
Confidence            48999999999 7999999999997  8999999998677899999999999999876  5778866555  55678 99


Q ss_pred             EEEecccCCCCcCCcEEecCC
Q 025810          224 VVANNAIPQIWKAGVAYESAI  244 (247)
Q Consensus       224 vv~~~vip~~w~~g~~y~t~~  244 (247)
                      ++++||||++|++|++|++.+
T Consensus        76 ~v~~nViP~~W~~G~ty~~~~   96 (96)
T 1bmw_A           76 NVFDDVVPEKYTIGATYAPEE   96 (96)
T ss_dssp             CCBSSCSCSSCCSSSCCCC--
T ss_pred             EEEeeEeCCCCCCCCEEeCCC
Confidence            999999999999999999863

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.69  E-value=1.2e-17  Score=131.37  Aligned_cols=66  Identities=21%  Similarity=0.388  Sum_probs=57.0

Q ss_pred             CCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCCCCCCeeeC-HHHHhhccccccccccccCcEEEEEEEEEeec
Q 025810           68 NNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLS-PRAFGRMALVDKSEELYTFGVVDVEFLRVPCR  142 (247)
Q Consensus        68 ~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~~~~~DLS-~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~  142 (247)
                      +++..||+|++|++..    ++++|+|+|+|+||.+  +|||| ++||++|+.++.   .++.|+++|+|++|+|+
T Consensus        58 ~~g~~CG~cv~Vtn~~----nGksV~V~VvD~CP~g--gLDLS~~~AF~~Ia~~g~---G~~~G~i~V~w~~V~C~  124 (125)
T 1bw3_A           58 RGQAACGKCLRVTNPA----TGAQITARIVDQCANG--GLDLDWDTVFTKIDTNGI---GYQQGHLNVNYQFVDCR  124 (125)
T ss_dssp             CSGGGTTCEEEEEETT----TTEEEEEEEEECCSSS--SCCSCSSSSHHHHCSSCH---HHHHSEEEEEEEEECCC
T ss_pred             CCCcccCCEEEeEeCC----CCCEEEEEEEEeCCCC--CCCCCCHHHHHHHhccCC---cccCcEEEEEEEEEeCC
Confidence            6778999999999854    3689999999999985  59999 999999996431   25799999999999996

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.32  E-value=1.2e-11  Score=92.68  Aligned_cols=92  Identities=25%  Similarity=0.223  Sum_probs=72.5

Q ss_pred             eeEEEEEeCCCCCCCCCCcccCCCCCCCCCCCceEEEeccccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCCCC-
Q 025810           26 TSSRASFYGSPDGLGTPAGACGFGAYGKTVNDANVAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDD-  104 (247)
Q Consensus        26 ~~g~aT~y~~~~~~g~~~GaCGy~~~~~~~~~~~~aA~s~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~~-  104 (247)
                      ..|.|+||+..-. | ...|||-...    ...++||-..+     .||..++|+...    ++++|+|+|.|+||.+. 
T Consensus         2 ~~G~ASwYg~~f~-G-~~TA~Ge~~~----~~~~tAAH~tl-----P~gt~vrVtNl~----nGksVvVrVnDRGP~~~g   66 (95)
T 4avr_A            2 DTGEASYYGSRHA-G-LRTASGERYN----PNAMTAAHRTL-----PFGARVRVTNLD----NRRSVVVRINDRGPFRRG   66 (95)
T ss_dssp             EEEEEEECCGGGT-T-SBCTTSCBCC----TTSCEEECSSS-----CTTCEEEEEETT----TCCEEEEEEEECCCCSTT
T ss_pred             CEEEEEEECCccC-C-CCCCCccCcC----CCCCEEEcCCC-----CCCcEEEEEECC----CCcEEEEEEccCCCCCCC
Confidence            5799999997411 1 3688875421    13578777643     799999999755    48999999999999976 


Q ss_pred             CCeeeCHHHHhhccccccccccccCcEEEEEEEEE
Q 025810          105 TDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRV  139 (247)
Q Consensus       105 ~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V  139 (247)
                      ..+|||+.||++|+       .++.|+.+|+|+.+
T Consensus        67 riIDLS~aAa~~Lg-------~~~~G~~~V~ve~~   94 (95)
T 4avr_A           67 RIIDVSRKAAEGLG-------MIRSGVAPVRIESL   94 (95)
T ss_dssp             EEEEECHHHHHHHT-------CTTTSCEEEEEEEC
T ss_pred             CEEEeCHHHHHHhC-------CcCCCEEEEEEEEe
Confidence            57999999999999       46799999999876

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=98.24  E-value=3.1e-06  Score=66.03  Aligned_cols=70  Identities=29%  Similarity=0.462  Sum_probs=55.1

Q ss_pred             EEEec--cccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCCCCCCeeeCHHHHhhccccccccccccCcEEEEEEE
Q 025810           60 VAGVS--RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFL  137 (247)
Q Consensus        60 ~aA~s--~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~  137 (247)
                      |.+..  .-|++ ..||.|+|++-..    .+++|.|..+|.-++   .|+|+.+||+.|.+. ++   ...|+|+++++
T Consensus        46 IGg~~~V~gwnS-~~CGtC~~lty~~----~g~si~vlaID~a~~---Gfnis~~Amn~LT~G-~a---~~lG~V~a~~~  113 (122)
T 3sul_A           46 VGAVDTITGWNS-ESCGTCYQITWSG----TGKTIHVVGVDVAGN---GFNVGQRAMDDLTNG-QA---VALGNIDVTAT  113 (122)
T ss_dssp             EEEETTCCSTTC-TTTTCEEEEEETT----TTEEEEEEEEEECSS---SEEECHHHHHHHHTS-CH---HHHSEEEEEEE
T ss_pred             cccccccccCCC-CCCCceEEEEEcC----CCcEEEEEEEecCCC---ceeehHHHHHHhcCC-cc---eecceEeEEEE
Confidence            66555  66766 9999999999642    368999999998753   499999999999863 22   24699999999


Q ss_pred             EEee
Q 025810          138 RVPC  141 (247)
Q Consensus       138 ~V~C  141 (247)
                      +|+=
T Consensus       114 qV~~  117 (122)
T 3sul_A          114 LVDK  117 (122)
T ss_dssp             EECG
T ss_pred             EcCH
Confidence            9963

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=98.14  E-value=6.3e-06  Score=64.62  Aligned_cols=68  Identities=28%  Similarity=0.658  Sum_probs=56.2

Q ss_pred             ceEEEec--cccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCCCCCCeeeCHHHHhhccccccccccccCcEE-EE
Q 025810           58 ANVAGVS--RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVV-DV  134 (247)
Q Consensus        58 ~~~aA~s--~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~~~~~DLS~~aF~~ia~~~~~~~~~~~G~~-~i  134 (247)
                      -+|.+..  .-|+ ...||.|+||+-.     ++++|.|+.+|.-++   .|+++.+||+.|.+.      ...|+| ++
T Consensus        50 P~IGga~~iagWN-S~~CGtC~~lty~-----ng~sI~vlaID~A~~---gFnIs~~Amn~LT~G------~~lG~V~~a  114 (129)
T 2kqa_A           50 PNVGGIPDIAGWD-SPSCGTCWKVTIP-----NGNSIFIRGVDSGRG---GFNVNPTAFTKLVGS------TEAGRVDNV  114 (129)
T ss_dssp             SSEEEETTCCSTT-CTTCSCEEEEEET-----TTEEEEEEEEEECSS---SEEECHHHHHHHHSS------SSSCCBCSC
T ss_pred             CeeccchhhccCC-CCCCCceEEEEEc-----CCCEEEEEEEccCCC---ceeehHHHHHHhcCC------cccCcEeEE
Confidence            4576666  6687 6999999999963     268999999998764   699999999999963      358999 99


Q ss_pred             EEEEEe
Q 025810          135 EFLRVP  140 (247)
Q Consensus       135 ~w~~V~  140 (247)
                      +|++|+
T Consensus       115 ~~~qV~  120 (129)
T 2kqa_A          115 NYVQVD  120 (129)
T ss_dssp             EEEECC
T ss_pred             EEEEcC
Confidence            999996

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=98.12  E-value=6.5e-06  Score=64.02  Aligned_cols=70  Identities=21%  Similarity=0.535  Sum_probs=54.9

Q ss_pred             ceEEEec--cccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCCCCCCeeeCHHHHhhccccccccccccCcEEEEE
Q 025810           58 ANVAGVS--RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVE  135 (247)
Q Consensus        58 ~~~aA~s--~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~  135 (247)
                      -+|.+..  .-|++ ..||.|+|++-.      +++|.|..+|.-+   ..|+|+.+||+.|.+ +++   ...|+|+++
T Consensus        44 P~IGg~~~i~gwns-~~CGtC~~lty~------g~si~vlaID~a~---~Gfnis~~A~n~LT~-G~a---~~lG~V~a~  109 (120)
T 3m3g_A           44 PYIGGAAAVAGWNS-ASCGTCWKLQYS------GHTIYVLAVDHAA---SGFNIALDAMNALTG-GQA---VQLGRVSAT  109 (120)
T ss_dssp             TSEEEETTCCSTTC-TTTTCEEEEEET------TEEEEEEEEEECS---SSEEECHHHHHHHHT-SCH---HHHCEEECE
T ss_pred             CccccccccccCCC-CCCCceEEEEEC------CeEEEEEEEecCC---CceeecHHHHHHhhC-Ccc---eeeeeEeEE
Confidence            4576655  66764 899999999952      5899999999763   459999999999985 332   246999999


Q ss_pred             EEEEee
Q 025810          136 FLRVPC  141 (247)
Q Consensus       136 w~~V~C  141 (247)
                      +++|+=
T Consensus       110 ~~~V~~  115 (120)
T 3m3g_A          110 ATQVPV  115 (120)
T ss_dssp             EEEECG
T ss_pred             EEEcCH
Confidence            999963

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.09  E-value=6e-06  Score=64.66  Aligned_cols=74  Identities=19%  Similarity=0.393  Sum_probs=55.6

Q ss_pred             ceEEEec--cccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCCCCCCeeeCHHHHhhccccccccccccCcEEEEE
Q 025810           58 ANVAGVS--RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVE  135 (247)
Q Consensus        58 ~~~aA~s--~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~  135 (247)
                      -+|.+..  .-|++ ..||.|+|++-.++.  ..++|.|..+|.-+   ..|+|+.+||+.|.+. ++   ...|+|+++
T Consensus        45 P~IGg~~~i~gwnS-~~CGtC~~lty~g~~--~~~si~vlaID~a~---~Gfnis~~Amn~LT~G-~a---~~lG~V~~~  114 (125)
T 3suk_A           45 PHIGASSDIGGFNS-PACGNCYTISFTFQG--VTRSINLVAIDHAG---NGFNVAQAAMDELTNG-NA---VALGTIDVQ  114 (125)
T ss_dssp             TSEEEETTCCSTTC-TTTTCEEEEEEEETT--EEEEEEEEEEEECS---SSEEECHHHHHHHHTS-CH---HHHCEEEEE
T ss_pred             CeeccccccccCCC-CCCCeeEEEEEcCCC--cceEEEEEEEecCC---CceeecHHHHHHhcCC-cc---cccceEeEE
Confidence            4576665  66764 899999999964321  23789999999765   3499999999999863 22   236999999


Q ss_pred             EEEEee
Q 025810          136 FLRVPC  141 (247)
Q Consensus       136 w~~V~C  141 (247)
                      +++|+=
T Consensus       115 ~~~V~~  120 (125)
T 3suk_A          115 SQQVAR  120 (125)
T ss_dssp             EEEECG
T ss_pred             EEEcCH
Confidence            999963

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=98.08  E-value=8.5e-06  Score=63.94  Aligned_cols=75  Identities=25%  Similarity=0.489  Sum_probs=55.6

Q ss_pred             ceEEEec--cccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCCCCCCeeeCHHHHhhccccccccccccCcEEEEE
Q 025810           58 ANVAGVS--RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVDKSEELYTFGVVDVE  135 (247)
Q Consensus        58 ~~~aA~s--~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~  135 (247)
                      -+|.+..  .-|++ ..||.|+|++-.++. -..++|.|..+|.-++   .|+|+.+||+.|.+. ++   ...|+|+++
T Consensus        44 P~IGg~~~i~gwns-~~CGtC~~lty~g~~-~~~~si~vlaID~a~~---Gfnis~~Amn~LT~g-~a---~~lG~V~~~  114 (127)
T 3suj_A           44 PCIGGSSDIAGYNS-PNCGSCYQLTYSSAH-TTPKSIYMVAIDRSAE---GFTASKQAMDDLTNK-RA---EELGTVNVD  114 (127)
T ss_dssp             TSEEEETTCCSTTC-TTTTCEEEEEECCSS-SCCEEEEEEEEEECSS---SEEECHHHHHHHHTS-CH---HHHSSEEEE
T ss_pred             CeeccccccccCCC-CCCCceEEEEECCCC-CcceEEEEEEEecCCC---ceeecHHHHHHhcCC-cc---ccceeEEEE
Confidence            4566655  66764 899999999965311 0126899999998754   499999999999863 22   246899999


Q ss_pred             EEEEee
Q 025810          136 FLRVPC  141 (247)
Q Consensus       136 w~~V~C  141 (247)
                      |++|+=
T Consensus       115 ~~~V~~  120 (127)
T 3suj_A          115 VRKVDF  120 (127)
T ss_dssp             EEEECG
T ss_pred             EEEeCH
Confidence            999974

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=97.65  E-value=0.00013  Score=57.60  Aligned_cols=73  Identities=21%  Similarity=0.360  Sum_probs=53.3

Q ss_pred             ceEEEeccccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCCCCCCeeeCHHHHhhccccc-cccccccCcEEEE-E
Q 025810           58 ANVAGVSRLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLSPRAFGRMALVD-KSEELYTFGVVDV-E  135 (247)
Q Consensus        58 ~~~aA~s~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~~~~~DLS~~aF~~ia~~~-~~~~~~~~G~~~i-~  135 (247)
                      -+|.|..  |+ ...||.|+||+-.      +++|.|..+|.-.+. .-||||.+||+.|.+.- ..+ ....|+|++ +
T Consensus        48 P~igg~~--wn-s~~CGtCwkLtY~------G~sI~vlaID~a~~g-~~FnIs~~Amn~LT~G~~a~~-a~elG~Vda~~  116 (136)
T 3sum_A           48 PHFVAAP--EA-QTECGSCWKLRYK------GNHAFVTVVDRVEEA-NLFVGGTDLVKNLTTFNGAPE-GYDWGTAQLFS  116 (136)
T ss_dssp             TSEEECC--BT-TBCTTCEEEEEET------TEEEEEEEEECCCST-TEEEECHHHHHHHTCBTTBCH-HHHHSEEECSE
T ss_pred             Ccccccc--cC-CCCCCceEEEEEC------CeEEEEEEEecCCCc-ceEeehHHHHHHHhCCCcccc-ceecceeeeeE
Confidence            3566555  54 5899999999953      579999999976421 13999999999998531 111 135799999 9


Q ss_pred             EEEEee
Q 025810          136 FLRVPC  141 (247)
Q Consensus       136 w~~V~C  141 (247)
                      |++|+=
T Consensus       117 ~~qVd~  122 (136)
T 3sum_A          117 AYQVDG  122 (136)
T ss_dssp             EEEECG
T ss_pred             EEEcCH
Confidence            999973

>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A

Probab=93.76  E-value=0.04  Score=46.26  Aligned_cols=51  Identities=24%  Similarity=0.267  Sum_probs=34.2

Q ss_pred             EEEec-cccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCC-CCCCeeeCH
Q 025810           60 VAGVS-RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEG-DDTDFVLSP  111 (247)
Q Consensus        60 ~aA~s-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~-~~~~~DLS~  111 (247)
                      +||.+ .--.....|++||+++=++. ...+|+.+|+||+.... ..+||||..
T Consensus        72 FaA~~~~g~~e~~~Cc~C~~LtFt~~-~~~GKkmiVQ~TNtG~Dl~~n~FDl~i  124 (210)
T 2eng_A           72 FAATSIAGSNEAGWCCACYELTFTSG-PVAGKKMVVQSTSTGGDLGSNHFDLNI  124 (210)
T ss_dssp             EEEEECTTCCHHHHTTCEEEEEECSG-GGTTCEEEEEEEEC-----CCEEEEEC
T ss_pred             eeeeeccCCccccccceeEEEEEcCC-CcCCCEEEEEEecccCCCCCCceeEec
Confidence            55665 42223367999999997653 24578999999999865 458999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	247
d1n10a2	143	b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-t	5e-31
d1n10a1	95	b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {T	2e-24
d1whoa_	94	b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum praten	3e-20
d1wc2a1	180	b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mu	2e-12

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 143

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  109 bits (274), Expect = 5e-31
 Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 5/126 (3%)

Query: 25  FTSSRASFYGSPDGLGTP--AGACGFGAYGKTVNDANVAGVS-RLWNNGTGCGACYQVRC 81
           +  +++++YG P G G     GACG+    K          +  ++ +G GCG+C++++C
Sbjct: 17  WLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKC 76

Query: 82  NVPEVCTDYGVYVVVTDYGEG--DDTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRV 139
             PE C+   V V +TD  E       F LS  AFG MA     ++L + G ++++F RV
Sbjct: 77  TKPEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRV 136

Query: 140 PCRFRG 145
            C++  
Sbjct: 137 KCKYPE 142

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 95

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score = 91.3 bits (227), Expect = 2e-24
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 2/96 (2%)

Query: 147 NLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPP 206
            + F V + S  P YLA+ + YV G  DV+AV++ ++    W+ ++ ++GA++ I  P  
Sbjct: 2   KVTFHVEKGSN-PNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDK 60

Query: 207 GAINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYES 242
                  + +   G T   A + IP+ WKA  +YES
Sbjct: 61  LTGPFTVRYTTEGG-TKTEAEDVIPEGWKADTSYES 95

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 94

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score = 80.2 bits (198), Expect = 3e-20
 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 4/94 (4%)

Query: 148 LKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISNPPPG 207
           + F V + S   ++LAV + Y G    +  VE+ +    +WVAM +  G V+   +  P 
Sbjct: 4   VTFTVEKGSN-EKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPL 60

Query: 208 AINLRFQVSGSAGLTWVVANNAIPQIWKAGVAYE 241
                F+     G    V ++ +P+ +  G  Y 
Sbjct: 61  QGPFNFRFLTEKG-MKNVFDDVVPEKYTIGATYA 93

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 180

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

 Score = 61.6 bits (149), Expect = 2e-12
 Identities = 24/174 (13%), Positives = 42/174 (24%), Gaps = 54/174 (31%)

Query: 27  SSRASFYGSPDGLGTPAGACGFGA------YGKTVNDANVAGVSRLWNN------GTGCG 74
            +  + Y          GACG G       +G        A     +++      G  CG
Sbjct: 16  CASTTNYHDSHK-----GACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCG 70

Query: 75  ACYQVRCNVPEVCTDYG-------VYVVVTDY---------------------GEGDDTD 106
            C ++      V    G          ++T+                        G +  
Sbjct: 71  QCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELH 130

Query: 107 FVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRGYNLKFKVHENSKYPQ 160
             L      ++  +            +  +  V C     N   +   NS Y Q
Sbjct: 131 LDLEN-GRSQVTGMGW-------NNPETTWEVVNCDSEH-NHDHRTPSNSMYGQ 175

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	247
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	100.0
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	99.96
d1n10a1	95	PHL P 1 C-terminal domain {Timothy grass (Phleum p	99.96
d1whoa_	94	PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 1	99.94
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	98.67
d2enga_	210	Endoglucanase V (Eng V) {Humicola insolens [TaxId:	92.06
d1ogpa1	127	Sulfite oxidase, C-terminal domain {Mouse-ear cres	83.38
d2a9da1	123	Sulfite oxidase, C-terminal domain {Chicken (Gallu	82.9

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=100.00  E-value=8.6e-38  Score=251.80  Aligned_cols=127  Identities=30%  Similarity=0.635  Sum_probs=108.1

Q ss_pred             cccCCCceeEEEEEeCCCCCCCC--CCcccCCCCCCCCCCCceEEEec-cccCCCCCCCceEEEEeCCCCcccCCcEEEE
Q 025810           19 CYSQFTFTSSRASFYGSPDGLGT--PAGACGFGAYGKTVNDANVAGVS-RLWNNGTGCGACYQVRCNVPEVCTDYGVYVV   95 (247)
Q Consensus        19 ~~~~~~~~~g~aT~y~~~~~~g~--~~GaCGy~~~~~~~~~~~~aA~s-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~   95 (247)
                      +...++|++|+||||+.+++.++  .+|||||++++..|++.++||+| .+|++|..||+||||+|.++++|.+++|+|+
T Consensus        11 a~~~~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~~~~c~~~sv~V~   90 (143)
T d1n10a2          11 ATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVH   90 (143)
T ss_dssp             CBCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEE
T ss_pred             cccCCCcEeeEEeEeCCCCCCCCCCCcccCCCCCcccCCCcceEEEeCHhHccCCCcCCcceEeEcCCCCcccCCCEEEE
Confidence            34467999999999998876553  36999999988888899999999 9999999999999999999999999999999


Q ss_pred             EeeCCCCC--CCCeeeCHHHHhhccccccccccccCcEEEEEEEEEeecccC
Q 025810           96 VTDYGEGD--DTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCRFRG  145 (247)
Q Consensus        96 V~D~Cp~~--~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~~~g  145 (247)
                      |||.||.+  .+|||||++||.+||+++....+++.|+++|+||||+|.++|
T Consensus        91 vtd~c~~~~~~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRrV~C~~~g  142 (143)
T d1n10a2          91 ITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPE  142 (143)
T ss_dssp             EEEECSSCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCT
T ss_pred             EEecccCCCCCccccCCHHHHhhhccccchhhheecCccceEEEEEeccCCC
Confidence            99999863  479999999999999876555567899999999999999876

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=99.96  E-value=1.5e-31  Score=220.83  Aligned_cols=117  Identities=16%  Similarity=0.248  Sum_probs=97.0

Q ss_pred             CCceeEEEEEeCCCCCCCCCCcccCCCCCCCC-----CCCceEEEec-cccCC------CCCCCceEEEEeCCCCcc---
Q 025810           23 FTFTSSRASFYGSPDGLGTPAGACGFGAYGKT-----VNDANVAGVS-RLWNN------GTGCGACYQVRCNVPEVC---   87 (247)
Q Consensus        23 ~~~~~g~aT~y~~~~~~g~~~GaCGy~~~~~~-----~~~~~~aA~s-~~~~~------g~~CG~C~~V~c~~~~~C---   87 (247)
                      ..|+.+++|||+.+     .+|||||+++...     .++.++||+| .||++      |+.||+||||||++...|   
T Consensus        12 ~g~~~A~aT~Ygd~-----~~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~   86 (180)
T d1wc2a1          12 NGKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG   86 (180)
T ss_dssp             TTEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred             CCccccceEEeCCC-----CCCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccC
Confidence            37999999999976     4799999987432     2368999999 99999      899999999999864322   


Q ss_pred             ----cCCcEEEEEeeCCCC-------C--------------CCCeeeCHHHHhhccccccccccccCcEEEEEEEEEeec
Q 025810           88 ----TDYGVYVVVTDYGEG-------D--------------DTDFVLSPRAFGRMALVDKSEELYTFGVVDVEFLRVPCR  142 (247)
Q Consensus        88 ----~~~~v~V~V~D~Cp~-------~--------------~~~~DLS~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~  142 (247)
                          .+++|+|||||+||.       |              ..||||+ .||.+||       ....|+|+|+||+|+|+
T Consensus        87 ~~~~~g~sV~V~iTd~CP~n~~n~gWCn~p~~~~~~n~~g~~~HFDLs-~af~~ia-------~~~~G~v~V~yrrV~C~  158 (180)
T d1wc2a1          87 GPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLE-NGRSQVT-------GMGWNNPETTWEVVNCD  158 (180)
T ss_dssp             CCCCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEE-CTTSTTG-------GGTCSSEEEEEEEECHH
T ss_pred             CCCCCCCcEEEEEEecCCCCCCCCCccCCccccccccccCcccceech-HHHHHHh-------hhcCCcceeEEEEeeCC
Confidence                256899999999994       2              1299997 5999999       45789999999999999


Q ss_pred             ccCCceEEEEe
Q 025810          143 FRGYNLKFKVH  153 (247)
Q Consensus       143 ~~g~ni~~~v~  153 (247)
                      ..+ ++++++.
T Consensus       159 ~~g-~~~~~~~  168 (180)
T d1wc2a1         159 SEH-NHDHRTP  168 (180)
T ss_dssp             HHH-HHCTTSC
T ss_pred             Ccc-ccccccc
Confidence            988 8887655

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.96  E-value=3.4e-29  Score=188.07  Aligned_cols=93  Identities=32%  Similarity=0.656  Sum_probs=83.1

Q ss_pred             CceEEEEecCCCCCcEEEEEEEEcCCCcceEEEEEEecCCCCeEEcccccCceeecCC--CCCCCeeEEEEEEecCCCEE
Q 025810          146 YNLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDISN--PPPGAINLRFQVSGSAGLTW  223 (247)
Q Consensus       146 ~ni~~~v~~gS~~~~w~a~~i~n~gg~~~I~sVev~~~~~~~W~~m~R~~gn~W~~~~--~~~gp~~lr~~vt~~~G~~~  223 (247)
                      ++|+|+|++|| |||||+++|.|++|.++|.+|||++.+++.|++|+|+|||+|+.+.  ++++|  |+||+|+.+| ++
T Consensus         1 t~i~F~v~~gs-np~~lav~v~n~~g~gdI~~vevk~~g~~~W~~m~r~~ga~W~~~~~~~~~gp--ls~Rvt~~~G-~~   76 (95)
T d1n10a1           1 TKVTFHVEKGS-NPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGP--FTVRYTTEGG-TK   76 (95)
T ss_dssp             CCCEEEECTTC-BTTEEEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCSC--EEEEEEESSS-CE
T ss_pred             CcEEEEECCCC-CcceEEEEEEEcCCCCcEEEEEEEeCCCCcceEEEECCCCeEEECCCCCCCcC--EEEEEEEcCC-CE
Confidence            48999999999 8999999999999999999999999888899999999999998654  35577  4556667788 89


Q ss_pred             EEEecccCCCCcCCcEEec
Q 025810          224 VVANNAIPQIWKAGVAYES  242 (247)
Q Consensus       224 vv~~~vip~~w~~g~~y~t  242 (247)
                      +++.||||++|++|++|++
T Consensus        77 ~v~~nViP~~W~~G~tY~s   95 (95)
T d1n10a1          77 TEAEDVIPEGWKADTSYES   95 (95)
T ss_dssp             EEEEEEECSSCCSSEEEEC
T ss_pred             EEECceECCCCCCCCEEeC
Confidence            9999999999999999986

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.94  E-value=9e-27  Score=174.43  Aligned_cols=89  Identities=27%  Similarity=0.536  Sum_probs=79.3

Q ss_pred             ceEEEEecCCCCCcEEEEEEEEcCCCcceEEEEEEecCCCCeEEcccccCceeecC--CCCCCCeeEEEEEEecCCCEEE
Q 025810          147 NLKFKVHENSKYPQYLAVSMLYVGGQNDVLAVEMWQEDCKDWVAMRRAFGAVFDIS--NPPPGAINLRFQVSGSAGLTWV  224 (247)
Q Consensus       147 ni~~~v~~gS~~~~w~a~~i~n~gg~~~I~sVev~~~~~~~W~~m~R~~gn~W~~~--~~~~gp~~lr~~vt~~~G~~~v  224 (247)
                      .|+|+|++|| |+|||+++|.|+||  +|.+|||++.++++|++|+|+|||+|+.+  .++.+|  |+||+|+.+| +++
T Consensus         3 ~v~f~v~~GS-np~~lav~v~~~gg--~i~~vev~~~gs~~W~~M~r~wGa~W~~~~~~~~~gp--lsfRvt~~~G-~~~   76 (94)
T d1whoa_           3 KVTFTVEKGS-NEKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQGP--FNFRFLTEKG-MKN   76 (94)
T ss_dssp             SEEEEECTTC-BTTEEEEEEEETTC--CEEEEEEECTTCCCCEECEECSTTEEEEECSSCCCSS--EEEEEEETTS-CEE
T ss_pred             cEEEEECCCC-CccEEEEEEEEcCC--CEEEEEEEECCCCceeECccCcCccEEECCCCCCCcc--EEEEEEEcCC-CEE
Confidence            6999999999 89999999999964  89999999888889999999999999764  345666  6677777888 899


Q ss_pred             EEecccCCCCcCCcEEe
Q 025810          225 VANNAIPQIWKAGVAYE  241 (247)
Q Consensus       225 v~~~vip~~w~~g~~y~  241 (247)
                      +++||||++|++|++|+
T Consensus        77 v~~nViP~~W~~G~ty~   93 (94)
T d1whoa_          77 VFDDVVPEKYTIGATYA   93 (94)
T ss_dssp             EEEEEECSSCCTTCEEC
T ss_pred             EEcceECCCCCCCCEEC
Confidence            99999999999999996

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=98.67  E-value=7.1e-09  Score=77.25  Aligned_cols=63  Identities=22%  Similarity=0.401  Sum_probs=52.8

Q ss_pred             CCCCceEEEEeCCCCcccCCcEEEEEeeCCCCCCCCeeeC-HHHHhhccccccccccccCcEEEEEEEEEeec
Q 025810           71 TGCGACYQVRCNVPEVCTDYGVYVVVTDYGEGDDTDFVLS-PRAFGRMALVDKSEELYTFGVVDVEFLRVPCR  142 (247)
Q Consensus        71 ~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~~~~~~DLS-~~aF~~ia~~~~~~~~~~~G~~~i~w~~V~C~  142 (247)
                      ..||+|++|+.+.    ++.+++|+|+|+|..  +.|||. +..|++|...|.   ....|.+.|.|++|.|.
T Consensus        61 ~sCGkclrvTN~a----tga~~~~RiVDqCsn--gGlDLD~~~vFn~iDtdG~---G~~~Ghl~V~y~fV~C~  124 (125)
T d1bw3a_          61 AACGKCLRVTNPA----TGAQITARIVDQCAN--GGLDLDWDTVFTKIDTNGI---GYQQGHLNVNYQFVDCR  124 (125)
T ss_dssp             GGTTCEEEEEETT----TTEEEEEEEEECCSS--SSCCSCSSSSHHHHCSSCH---HHHHSEEEEEEEEECCC
T ss_pred             ccccceEEeeecc----cCcEEEEEEeecccC--CCCccccHhhhheecCCCc---ccccccEEEEEEEecCC
Confidence            6799999999654    477999999999985  588998 679999975443   45689999999999995

>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens [TaxId: 34413]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase V (Eng V)
species: Humicola insolens [TaxId: 34413]

Probab=92.06  E-value=0.046  Score=43.84  Aligned_cols=50  Identities=24%  Similarity=0.298  Sum_probs=33.4

Q ss_pred             EEEec-cccCCCCCCCceEEEEeCCCCcccCCcEEEEEeeCCCC-CCCCeeeC
Q 025810           60 VAGVS-RLWNNGTGCGACYQVRCNVPEVCTDYGVYVVVTDYGEG-DDTDFVLS  110 (247)
Q Consensus        60 ~aA~s-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~V~V~D~Cp~-~~~~~DLS  110 (247)
                      +||.+ .-...+..|.+|||++=+..+ =.+|+.+|+|++.=-. ..+||||.
T Consensus        72 fAA~~~~g~~e~~~Cc~Cy~LtFTs~~-~~GKkMiVQ~tNTGgDlg~n~FDl~  123 (210)
T d2enga_          72 FAATSIAGSNEAGWCCACYELTFTSGP-VAGKKMVVQSTSTGGDLGSNHFDLN  123 (210)
T ss_dssp             EEEEECTTCCHHHHTTCEEEEEECSGG-GTTCEEEEEEEEC-----CCEEEEE
T ss_pred             eeeeeecCCCccccccccEEEEeecCC-cCCCEEEEEEeccCCccCCCeeeEe
Confidence            56666 544445679999999976421 1468899999987543 45899984

>d1ogpa1 b.1.18.6 (A:263-389) Sulfite oxidase, C-terminal domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Molybdenum-containing oxidoreductases-like dimerisation domain
domain: Sulfite oxidase, C-terminal domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.38  E-value=0.71  Score=33.82  Aligned_cols=51  Identities=20%  Similarity=0.335  Sum_probs=33.3

Q ss_pred             CCCcceEEEEEEecCCCCeEEcccccC-----------------ceeecCCCCCCCeeEEEEEEecCC
Q 025810          170 GGQNDVLAVEMWQEDCKDWVAMRRAFG-----------------AVFDISNPPPGAINLRFQVSGSAG  220 (247)
Q Consensus       170 gg~~~I~sVev~~~~~~~W~~m~R~~g-----------------n~W~~~~~~~gp~~lr~~vt~~~G  220 (247)
                      ||-.+|+.|||..+++.+|+.......                 -.|+..-+..+...|..|-++..|
T Consensus        31 Ggg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~w~W~~~~~~~~~~g~~~i~~RA~D~~g   98 (127)
T d1ogpa1          31 GGGRGIERVDISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQTTEVIAKAVDSAA   98 (127)
T ss_dssp             STTCCEEEEEEESSTTSSCEECEEESSSSSCCCSSSTTSCTTSCEEEEEEEEESSCEEEEEEEEETTC
T ss_pred             CCCceEEEEEEEeCCCCccEEeeccCCccccccccccCCcccEEEEEEEEecCCCceEEEEEEECCCC
Confidence            444589999999988889987653210                 012222234567778888888777

>d2a9da1 b.1.18.6 (A:344-466) Sulfite oxidase, C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Molybdenum-containing oxidoreductases-like dimerisation domain
domain: Sulfite oxidase, C-terminal domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=82.90  E-value=1.1  Score=32.52  Aligned_cols=51  Identities=16%  Similarity=0.302  Sum_probs=34.0

Q ss_pred             CCCcceEEEEEEecCCCCeEEcccc--c------Cc--eeecC--CCCCCCeeEEEEEEecCC
Q 025810          170 GGQNDVLAVEMWQEDCKDWVAMRRA--F------GA--VFDIS--NPPPGAINLRFQVSGSAG  220 (247)
Q Consensus       170 gg~~~I~sVev~~~~~~~W~~m~R~--~------gn--~W~~~--~~~~gp~~lr~~vt~~~G  220 (247)
                      ||..+|+.|||..+++.+|+.....  .      ++  .|++.  -+..+++.|..|-++..|
T Consensus        31 ggg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~W~~W~~~~~~~~~~~~~i~~RA~D~~G   93 (123)
T d2a9da1          31 GGGREVVRVDVSLDGGRTWKVARLMGDKAPPGRAWAWALWELTVPVEAGTELEIVCKAVDSSY   93 (123)
T ss_dssp             STTCCEEEEEEESBSSSSCEECEECSCCCCTTCCCSCEEEEEEEEECTTCEEEEEEEEEETTC
T ss_pred             CCCceEEEEEEEcCCCCccEEeEecCccCCCCceeEEEEEEEEEEcCCCCeEEEEEEEEcCCC
Confidence            4445899999999888899876532  1      11  34443  223357778888888887