Citrus Sinensis ID: 025822

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------
MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDYRT
ccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccc
ccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccc
masskereNFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKeeakgnevnaKRIKEYRQKVESELSDICNDIMTVIdehlipsasagesTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATtaaeadlppthpirlglALNFSVFYYEIMNSPERACHLAKQAFDEAISELDtlneesykDSTLIMQLLRDNLtlwtsdipedggdyrt
masskerenfvyVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLsvgyknvigarrASWRilssieqkeeakgnevnakrikEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRdnltlwtsdipedggdyrt
MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKayetattaaeaDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDYRT
*********FVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSS**************************ELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFG**************************PTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTS***********
****KER*NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILS**************AKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISEL*T***ESYKDSTLIMQLLRDNLT***************
********NFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIE**********NAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEK****************AAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDYRT
*******ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTS***********
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASSKERENFVYxxxxxxxxxxxxxxxxxxxxxAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERAxxxxxxxxxxxxxxxxxxxxxSYKDSTLIMQLLRDNLTLWTSDIPEDGGDYRT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query247 2.2.26 [Sep-21-2011]
Q96453261 14-3-3-like protein D OS= yes no 0.987 0.934 0.901 1e-129
P42654261 14-3-3-like protein B OS= N/A no 0.987 0.934 0.893 1e-128
Q96452258 14-3-3-like protein C OS= no no 0.979 0.937 0.876 1e-123
P93213261 14-3-3 protein 8 OS=Solan N/A no 0.979 0.927 0.851 1e-122
Q96299263 14-3-3-like protein GF14 yes no 0.987 0.927 0.844 1e-120
P93214261 14-3-3 protein 9 OS=Solan N/A no 0.987 0.934 0.864 1e-118
Q9C5W6268 14-3-3-like protein GF14 no no 0.983 0.906 0.802 1e-116
P93212252 14-3-3 protein 7 OS=Solan N/A no 0.971 0.952 0.800 1e-114
Q41246251 14-3-3-like protein OS=Ni N/A no 0.967 0.952 0.780 1e-108
Q9S9Z8252 14-3-3-like protein GF14 no no 0.959 0.940 0.793 1e-108
>sp|Q96453|1433D_SOYBN 14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1 Back     alignment and function desciption
 Score =  460 bits (1184), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 220/244 (90%), Positives = 234/244 (95%)

Query: 1   MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARR 60
           M +SK+RENFVY+AKLAEQAERY+EMV++MKNVA LDVELTVEERNLLSVGYKNVIGARR
Sbjct: 1   MTASKDRENFVYIAKLAEQAERYEEMVESMKNVANLDVELTVEERNLLSVGYKNVIGARR 60

Query: 61  ASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGES 120
           ASWRILSSIEQKEE KGNE+NAKRIKEYRQKVE ELS+ICND+M VIDEHLIPSA+AGES
Sbjct: 61  ASWRILSSIEQKEETKGNELNAKRIKEYRQKVELELSNICNDVMRVIDEHLIPSAAAGES 120

Query: 121 TVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNF 180
           TVF+YKMKGDYYRYLAEFK G+EKKEAA  SMKAYE+AT AAEADLPPTHPIRLGLALNF
Sbjct: 121 TVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATAAAEADLPPTHPIRLGLALNF 180

Query: 181 SVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE 240
           SVFYYEI+NSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE
Sbjct: 181 SVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE 240

Query: 241 DGGD 244
           DG D
Sbjct: 241 DGED 244

Glycine max (taxid: 3847)
>sp|P42654|1433B_VICFA 14-3-3-like protein B OS=Vicia faba PE=2 SV=1 Back     alignment and function description
>sp|Q96452|1433C_SOYBN 14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1 Back     alignment and function description
>sp|P93213|14338_SOLLC 14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2 Back     alignment and function description
>sp|Q96299|14339_ARATH 14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2 Back     alignment and function description
>sp|P93214|14339_SOLLC 14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2 Back     alignment and function description
>sp|Q9C5W6|14312_ARATH 14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1 Back     alignment and function description
>sp|P93212|14337_SOLLC 14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2 Back     alignment and function description
>sp|Q41246|1433_TOBAC 14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q9S9Z8|14311_ARATH 14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query247
449438105261 PREDICTED: 14-3-3-like protein D-like [C 0.987 0.934 0.918 1e-129
228552592261 14-3-3 [Cicer arietinum] 0.987 0.934 0.909 1e-128
363807580261 uncharacterized protein LOC100801348 [Gl 0.987 0.934 0.905 1e-128
351724655261 14-3-3-like protein D [Glycine max] gi|3 0.987 0.934 0.901 1e-127
388503664261 unknown [Lotus japonicus] 0.987 0.934 0.905 1e-127
1168192261 RecName: Full=14-3-3-like protein B; Alt 0.987 0.934 0.893 1e-126
356525282259 PREDICTED: 14-3-3-like protein C-like [G 0.987 0.942 0.885 1e-126
217073282261 unknown [Medicago truncatula] 0.979 0.927 0.892 1e-126
255564764260 14-3-3 protein, putative [Ricinus commun 0.995 0.946 0.878 1e-125
388506002259 unknown [Medicago truncatula] 0.979 0.934 0.880 1e-124
>gi|449438105|ref|XP_004136830.1| PREDICTED: 14-3-3-like protein D-like [Cucumis sativus] gi|449478984|ref|XP_004155472.1| PREDICTED: 14-3-3-like protein D-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/244 (91%), Positives = 236/244 (96%)

Query: 1   MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARR 60
           MAS+KER+NFVY+AKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNV+GARR
Sbjct: 1   MASTKERDNFVYIAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARR 60

Query: 61  ASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGES 120
           ASWRILSSIEQKEEAKGNE NAKRIKEYRQKVESELS ICNDIM VIDEHLIPSASAGES
Sbjct: 61  ASWRILSSIEQKEEAKGNETNAKRIKEYRQKVESELSGICNDIMMVIDEHLIPSASAGES 120

Query: 121 TVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNF 180
           TVF+YKMKGDYYRYLAEFK G+EKK+AA  SMKAYE AT++AE++LPPTHPIRLGLALNF
Sbjct: 121 TVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNF 180

Query: 181 SVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE 240
           SVFYYEI+NSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE
Sbjct: 181 SVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE 240

Query: 241 DGGD 244
           DG D
Sbjct: 241 DGDD 244

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|228552592|gb|ACQ45020.1| 14-3-3 [Cicer arietinum] Back     alignment and taxonomy information
>gi|363807580|ref|NP_001242151.1| uncharacterized protein LOC100801348 [Glycine max] gi|255647074|gb|ACU24005.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|351724655|ref|NP_001237065.1| 14-3-3-like protein D [Glycine max] gi|3023197|sp|Q96453.1|1433D_SOYBN RecName: Full=14-3-3-like protein D; AltName: Full=SGF14D gi|1575731|gb|AAB09583.1| SGF14D [Glycine max] Back     alignment and taxonomy information
>gi|388503664|gb|AFK39898.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|1168192|sp|P42654.1|1433B_VICFA RecName: Full=14-3-3-like protein B; AltName: Full=VFA-1433B gi|695767|emb|CAA88416.1| 14-3-3 brain protein homolog [Vicia faba] Back     alignment and taxonomy information
>gi|356525282|ref|XP_003531255.1| PREDICTED: 14-3-3-like protein C-like [Glycine max] Back     alignment and taxonomy information
>gi|217073282|gb|ACJ85000.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|255564764|ref|XP_002523376.1| 14-3-3 protein, putative [Ricinus communis] gi|223537326|gb|EEF38955.1| 14-3-3 protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|388506002|gb|AFK41067.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query247
TAIR|locus:2041544276 GRF9 "general regulatory facto 0.987 0.884 0.803 6.9e-102
TAIR|locus:2197940268 GRF12 "general regulatory fact 0.979 0.902 0.780 3.4e-100
TAIR|locus:2196506254 GRF10 "AT1G22300" [Arabidopsis 0.975 0.948 0.752 2.3e-94
ZFIN|ZDB-GENE-030131-779255 ywhae1 "tyrosine 3-monooxygena 0.959 0.929 0.742 3.5e-91
UNIPROTKB|Q5ZMT0255 YWHAE "14-3-3 protein epsilon" 0.959 0.929 0.734 1.1e-89
UNIPROTKB|P62261255 YWHAE "14-3-3 protein epsilon" 0.959 0.929 0.734 1.1e-89
UNIPROTKB|P62258255 YWHAE "14-3-3 protein epsilon" 0.959 0.929 0.734 1.1e-89
MGI|MGI:894689255 Ywhae "tyrosine 3-monooxygenas 0.959 0.929 0.734 1.1e-89
RGD|62000255 Ywhae "tyrosine 3-monooxygenas 0.959 0.929 0.734 1.1e-89
ZFIN|ZDB-GENE-050306-44255 ywhae2 "tyrosine 3-monooxygena 0.959 0.929 0.725 1.4e-89
TAIR|locus:2041544 GRF9 "general regulatory factor 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
 Identities = 196/244 (80%), Positives = 216/244 (88%)

Query:     1 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARR 60
             M S KER+ FVY+AKL+EQAERY+EMV++MK+VAKL+V+LTVEERNLLSVGYKNVIG+RR
Sbjct:     1 MGSGKERDTFVYLAKLSEQAERYEEMVESMKSVAKLNVDLTVEERNLLSVGYKNVIGSRR 60

Query:    61 ASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGES 120
             ASWRI SSIEQKE  KGN+VN KRIKEY +KVE ELS+IC DIM+V+DEHLIPSAS GES
Sbjct:    61 ASWRIFSSIEQKEAVKGNDVNVKRIKEYMEKVELELSNICIDIMSVLDEHLIPSASEGES 120

Query:   121 TVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNF 180
             TVFF KMKGDYYRYLAEFK G+E+KEAA  S+K            LPPTHPIRLGLALNF
Sbjct:   121 TVFFNKMKGDYYRYLAEFKSGNERKEAADQSLKAYEIATTAAEAKLPPTHPIRLGLALNF 180

Query:   181 SVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE 240
             SVFYYEIMN+PERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDI E
Sbjct:   181 SVFYYEIMNAPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDISE 240

Query:   241 DGGD 244
             +GGD
Sbjct:   241 EGGD 244
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0019904 "protein domain specific binding" evidence=IEA
GO:0045309 "protein phosphorylated amino acid binding" evidence=TAS
GO:0005634 "nucleus" evidence=IDA
GO:0005509 "calcium ion binding" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0048528 "post-embryonic root development" evidence=IMP
GO:0006096 "glycolysis" evidence=RCA
GO:0006833 "water transport" evidence=RCA
GO:0006972 "hyperosmotic response" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0009266 "response to temperature stimulus" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0032880 "regulation of protein localization" evidence=RCA
GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA
GO:0046686 "response to cadmium ion" evidence=RCA
GO:0009570 "chloroplast stroma" evidence=IDA;IPI
TAIR|locus:2197940 GRF12 "general regulatory factor 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196506 GRF10 "AT1G22300" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-779 ywhae1 "tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZMT0 YWHAE "14-3-3 protein epsilon" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P62261 YWHAE "14-3-3 protein epsilon" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P62258 YWHAE "14-3-3 protein epsilon" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:894689 Ywhae "tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|62000 Ywhae "tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050306-44 ywhae2 "tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P426541433B_VICFANo assigned EC number0.89340.98780.9348N/Ano
P42657RAD25_SCHPONo assigned EC number0.73070.94730.8666nono
P42656RAD24_SCHPONo assigned EC number0.72760.95140.8703yesno
O427661433_CANALNo assigned EC number0.72050.92710.8674N/Ano
Q964531433D_SOYBNNo assigned EC number0.90160.98780.9348yesno
Q964521433C_SOYBNNo assigned EC number0.87600.97970.9379nono
Q990021433_TRIHANo assigned EC number0.73040.93110.8778N/Ano
P921771433E_DROMENo assigned EC number0.75530.94330.8893yesno
O653521433_HELANNo assigned EC number0.71190.97160.9266N/Ano
Q4141814331_SOLTUNo assigned EC number0.72350.97970.9343N/Ano
Q434701433B_HORVUNo assigned EC number0.72910.96350.9083N/Ano
P4910614331_MAIZENo assigned EC number0.71650.98780.9348N/Ano
Q0696714336_ORYSJNo assigned EC number0.74580.96350.9153nono
Q6EUP414335_ORYSJNo assigned EC number0.74160.96350.9083nono
Q9C5W614312_ARATHNo assigned EC number0.80240.98380.9067nono
P426531433A_VICFANo assigned EC number0.71250.96350.9118N/Ano
P29311BMH1_YEASTNo assigned EC number0.70830.96760.8951nono
P4265214334_SOLLCNo assigned EC number0.72760.98380.9346N/Ano
P34730BMH2_YEASTNo assigned EC number0.71250.96760.8754yesno
P529081433_CHLRENo assigned EC number0.74480.96760.9227N/Ano
P622621433E_SHEEPNo assigned EC number0.75100.95950.9294N/Ano
P622601433E_RATNo assigned EC number0.75100.95950.9294yesno
P622611433E_BOVINNo assigned EC number0.75100.95950.9294yesno
P9321314338_SOLLCNo assigned EC number0.85120.97970.9272N/Ano
P9321214337_SOLLCNo assigned EC number0.80080.97160.9523N/Ano
P9321114336_SOLLCNo assigned EC number0.72460.97970.9379N/Ano
P932591433_MESCRNo assigned EC number0.72760.98780.9242N/Ano
P9321414339_SOLLCNo assigned EC number0.86470.98780.9348N/Ano
P4264414333_ARATHNo assigned EC number0.73330.96350.9333nono
Q9630014337_ARATHNo assigned EC number0.72540.97570.9094nono
P546321433_DICDINo assigned EC number0.72830.96350.9444yesno
Q2R2W214334_ORYSJNo assigned EC number0.71310.96350.8981nono
Q7XTE814332_ORYSJNo assigned EC number0.72910.96350.9083nono
Q9629914339_ARATHNo assigned EC number0.84420.98780.9277yesno
P622581433E_HUMANNo assigned EC number0.75100.95950.9294yesno
P9378414335_SOLTUNo assigned EC number0.73020.96350.9224N/Ano
Q9SP071433_LILLONo assigned EC number0.72910.96350.9189N/Ano
P462661433_PEANo assigned EC number0.71420.98380.9346N/Ano
P4834714310_ARATHNo assigned EC number0.77680.97570.9488nono
Q0152514332_ARATHNo assigned EC number0.70320.97970.9343nono
Q0152614332_MAIZENo assigned EC number0.71250.98780.9348N/Ano
O499981433F_TOBACNo assigned EC number0.70660.96760.9263N/Ano
Q6ZKC014333_ORYSJNo assigned EC number0.750.96350.9296yesno
O499951433B_TOBACNo assigned EC number0.72610.96350.9333N/Ano
P9320814332_SOLLCNo assigned EC number0.72910.96350.9370N/Ano
Q9S9Z814311_ARATHNo assigned EC number0.79320.95950.9404nono
P622591433E_MOUSENo assigned EC number0.75100.95950.9294yesno
Q5ZMT01433E_CHICKNo assigned EC number0.75100.95950.9294yesno
Q412461433_TOBACNo assigned EC number0.78000.96760.9521N/Ano
P293051433A_HORVUNo assigned EC number0.74160.96350.9083N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00035879001
SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (244 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query247
pfam00244236 pfam00244, 14-3-3, 14-3-3 protein 1e-157
smart00101244 smart00101, 14_3_3, 14-3-3 homologues 1e-133
cd08774225 cd08774, 14-3-3, 14-3-3 domain 1e-133
cd11309231 cd11309, 14-3-3_fungi, Fungal 14-3-3 protein domai 1e-132
COG5040268 COG5040, BMH1, 14-3-3 family protein [Signal trans 1e-129
cd10026237 cd10026, 14-3-3_plant, Plant 14-3-3 protein domain 1e-128
cd10020230 cd10020, 14-3-3_epsilon, 14-3-3 epsilon, an isofor 1e-127
cd11310230 cd11310, 14-3-3_1, 14-3-3 protein domain 1e-104
cd10022229 cd10022, 14-3-3_beta_zeta, 14-3-3 beta and zeta is 1e-104
cd10023234 cd10023, 14-3-3_theta, 14-3-3 theta/tau (theta in 1e-101
cd10024246 cd10024, 14-3-3_gamma, 14-3-3 gamma, an isoform of 4e-93
cd10019242 cd10019, 14-3-3_sigma, 14-3-3 sigma, an isoform of 1e-91
cd10025239 cd10025, 14-3-3_eta, 14-3-3 eta, an isoform of 14- 5e-91
>gnl|CDD|215815 pfam00244, 14-3-3, 14-3-3 protein Back     alignment and domain information 
 Score =  434 bits (1118), Expect = e-157
 Identities = 179/236 (75%), Positives = 205/236 (86%)

Query: 7   RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRIL 66
           RE  VY+AKLAEQAERYD+MV+AMK V +L  EL+VEERNLLSV YKNVIGARRASWRI+
Sbjct: 1   REELVYLAKLAEQAERYDDMVEAMKKVVELKEELSVEERNLLSVAYKNVIGARRASWRII 60

Query: 67  SSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYK 126
           SSIEQKEE+KGNE   K IKEYR+KVE EL +ICNDI+ ++D+HLIP AS+ ES VF+ K
Sbjct: 61  SSIEQKEESKGNEKKVKLIKEYRKKVEEELINICNDILELLDKHLIPKASSPESKVFYLK 120

Query: 127 MKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVFYYE 186
           MKGDYYRYLAEF  GDE+KEAA  +++AY+ A   AE +LPPTHPIRLGLALNFSVFYYE
Sbjct: 121 MKGDYYRYLAEFASGDERKEAADKALEAYKAALEIAEKELPPTHPIRLGLALNFSVFYYE 180

Query: 187 IMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDG 242
           I+NSPE+AC LAKQAFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTSD  E+ 
Sbjct: 181 ILNSPEKACELAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDEEEEE 236

Length = 236
>gnl|CDD|128412 smart00101, 14_3_3, 14-3-3 homologues Back     alignment and domain information
>gnl|CDD|206755 cd08774, 14-3-3, 14-3-3 domain Back     alignment and domain information
>gnl|CDD|206763 cd11309, 14-3-3_fungi, Fungal 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|227373 COG5040, BMH1, 14-3-3 family protein [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|206762 cd10026, 14-3-3_plant, Plant 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206757 cd10020, 14-3-3_epsilon, 14-3-3 epsilon, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206764 cd11310, 14-3-3_1, 14-3-3 protein domain Back     alignment and domain information
>gnl|CDD|206758 cd10022, 14-3-3_beta_zeta, 14-3-3 beta and zeta isoforms of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206759 cd10023, 14-3-3_theta, 14-3-3 theta/tau (theta in mice, tau in human), an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206760 cd10024, 14-3-3_gamma, 14-3-3 gamma, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206756 cd10019, 14-3-3_sigma, 14-3-3 sigma, an isoform of 14-3-3 protein Back     alignment and domain information
>gnl|CDD|206761 cd10025, 14-3-3_eta, 14-3-3 eta, an isoform of 14-3-3 protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 247
COG5040268 BMH1 14-3-3 family protein [Signal transduction me 100.0
smart00101244 14_3_3 14-3-3 homologues. 14-3-3 homologues mediat 100.0
PF00244236 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14 100.0
KOG0841247 consensus Multifunctional chaperone (14-3-3 family 100.0
PF1342478 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15 96.09
KOG1840508 consensus Kinesin light chain [Cytoskeleton] 94.32
TIGR00990615 3a0801s09 mitochondrial precursor proteins import 91.91
PF1286294 Apc5: Anaphase-promoting complex subunit 5 89.34
KOG1840508 consensus Kinesin light chain [Cytoskeleton] 87.77
PF0771934 TPR_2: Tetratricopeptide repeat; InterPro: IPR0131 82.35
PF1341469 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A 81.97
PF1337442 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT 81.09
PF1317433 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_ 80.41
>COG5040 BMH1 14-3-3 family protein [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.4e-94  Score=606.08  Aligned_cols=236  Identities=73%  Similarity=1.142  Sum_probs=231.6

Q ss_pred             chhHHhHHHHHHHHHHhCChHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhhCchHHHH
Q 025822            4 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAK   83 (247)
Q Consensus         4 ~~~re~l~~~aklaeq~ery~Dm~~~mk~~i~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~   83 (247)
                      ++.||+.+|+|+|++||+||++|++-||.++..+.+|+.+|||||||||||+||.||+|||++++++||+++++++.++.
T Consensus         2 s~~rE~svylAkLaeqAERYe~MvenMk~vas~~~eLsVeeRNLlSVAYKNvigaRRaSWRivsSieQKeEsk~~~~qv~   81 (268)
T COG5040           2 STSREDSVYLAKLAEQAERYEEMVENMKLVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTHQVE   81 (268)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhcCCChhHHH
Confidence            34499999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHhhhcccccccchhcccCchhHHHHHHHHHHHHHHHHHHh
Q 025822           84 RIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE  163 (247)
Q Consensus        84 ~i~~yk~ki~~EL~~~c~eii~lid~~Llp~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~~Y~~A~~~a~  163 (247)
                      .|++||++|++||..||++|+++|+++|||.+++.|++|||+|||||||||+|||..|+.+.++.+.+.++|+.|.++|.
T Consensus        82 lI~eyrkkiE~EL~~icddiL~vl~~hlipaa~~~EskvFyyKMKGDYyRYlAEf~~G~~~~e~a~~slE~YK~AseiA~  161 (268)
T COG5040          82 LIKEYRKKIETELTKICDDILSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFSVGEAREEAADSSLEAYKAASEIAT  161 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeecchHHHHHHHhccchHhHHHHHhHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccCCC
Q 025822          164 ADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIP  239 (247)
Q Consensus       164 ~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~ilqlLrdNl~~W~~~~~  239 (247)
                      ..||||||||||||||||||||||+|++++||.|||+|||+||++||+|+|++|+|+|+||||||||||+|+++.+
T Consensus       162 teLpPT~PirLGLALNfSVFyYEIlnspdkAC~lAKqaFDeAI~ELDtLSEEsYkDSTLIMQLLRDNLTLWTSd~e  237 (268)
T COG5040         162 TELPPTHPIRLGLALNFSVFYYEILNSPDKACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDAE  237 (268)
T ss_pred             ccCCCCCchhhhheecceeeeeecccCcHHHHHHHHHHHHHHHHHHhhhhhhhhcchHHHHHHHHhcceeeecccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999754

>smart00101 14_3_3 14-3-3 homologues Back     alignment and domain information
>PF00244 14-3-3: 14-3-3 protein; InterPro: IPR023410 The 14-3-3 proteins are a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimeric within all eukaryotic cells [, ] Back     alignment and domain information
>KOG0841 consensus Multifunctional chaperone (14-3-3 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13424 TPR_12: Tetratricopeptide repeat; PDB: 3RO2_A 3Q15_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 4A1S_B 3CEQ_B 3EDT_H Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) Back     alignment and domain information
>PF12862 Apc5: Anaphase-promoting complex subunit 5 Back     alignment and domain information
>KOG1840 consensus Kinesin light chain [Cytoskeleton] Back     alignment and domain information
>PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ] Back     alignment and domain information
>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A Back     alignment and domain information
>PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A Back     alignment and domain information
>PF13174 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_A 3URZ_B 2Q7F_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query247
3ubw_A261 Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphope 1e-100
2br9_A234 14-3-3 Protein Epsilon (Human) Complexed To Peptide 2e-98
3ual_A232 Crystal Structure Of 14-3-3 Epsilon With Mlf1 Pepti 8e-98
3axy_C240 Structure Of Florigen Activation Complex Consisting 3e-95
1o9c_A260 Structural View Of A Fungal Toxin Acting On A 14-3- 3e-94
4dx0_A243 Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A 2e-93
2o98_A242 Structure Of The 14-3-3 H+-Atpase Plant Complex Len 2e-92
3m50_A240 Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E 4e-92
2v7d_A247 14-3-3 Protein Zeta In Complex With Thr758 Phosphor 2e-84
2bq0_A245 14-3-3 Protein Beta (Human) Length = 245 3e-84
3rdh_A248 X-Ray Induced Covalent Inhibition Of 14-3-3 Length 3e-84
2c1j_A258 Molecular Basis For The Recognition Of Phosphorylat 4e-84
1a38_A245 14-3-3 Protein Zeta Bound To R18 Peptide Length = 2 4e-84
4fj3_A235 14-3-3 Isoform Zeta In Complex With A Diphoyphoryla 2e-83
2o02_A230 Phosphorylation Independent Interactions Between 14 5e-83
4gnt_A245 Complex Of Chrebp And 14-3-3beta Length = 245 6e-83
3uzd_A248 Crystal Structure Of 14-3-3 Gamma Length = 248 2e-82
2b05_A246 Crystal Structure Of 14-3-3 Gamma In Complex With A 3e-82
2npm_A260 Crystal Structure Of Cryptosporidium Parvum 14-3-3 2e-80
4dnk_A247 Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYP 2e-80
2c63_A247 14-3-3 Protein Eta (Human) Complexed To Peptide Len 2e-79
2btp_A256 14-3-3 Protein Theta (Human) Complexed To Peptide L 7e-79
4e2e_A248 Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYP 8e-79
3smo_A235 Crystal Structure Of Human 14-3-3 Sigma C38vN166H I 3e-76
3p1r_A236 Crystal Structure Of Human 14-3-3 Sigma C38vN166H I 3e-76
3lw1_A253 Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptid 4e-76
1ywt_A248 Crystal Structure Of The Human Sigma Isoform Of 14- 7e-76
3p1p_A236 Crystal Structure Of Human 14-3-3 Sigma C38nN166H I 2e-75
3o8i_A239 Structure Of 14-3-3 Isoform Sigma In Complex With A 9e-75
3iqj_A236 Crystal Structure Of Human 14-3-3 Sigma In Complex 1e-74
4hqw_A236 Molecular Tweezers Modulate 14-3-3 Protein-protein 1e-74
3p1n_A235 Crystal Structure Of Human 14-3-3 Sigma In Complex 1e-74
3t0l_A235 Small-Molecule Inhibitors Of 14-3-3 Protein-Protein 1e-74
4dat_A234 Structure Of 14-3-3 Sigma In Complex With Padi6 14- 1e-74
3u9x_A235 Covalent Attachment Of Pyridoxal-Phosphate Derivati 5e-74
3efz_A268 Crystal Structure Of A 14-3-3 Protein From Cryptosp 4e-11
>pdb|3UBW|A Chain A, Complex Of 14-3-3 Isoform Epsilon, A Mlf1 Phosphopeptide And A Small Fragment Hit From A Fbdd Screen Length = 261 Back     alignment and structure 
Iteration: 1

 Score =  359 bits (921), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/237 (73%), Positives = 199/237 (83%)
Query: 1   MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARR 60
           M S  +RE+ VY AKLAEQAERYDEMV++MK VA +DVELTVEERNLLSV YKNVIGARR
Sbjct: 25  MGSMDDREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARR 84
Query: 61  ASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGES 120
           ASWRI+SSIEQKEE KG E   K I+EYRQ VE+EL  IC DI+ V+D+HLIP+A+ GES
Sbjct: 85  ASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICXDILDVLDKHLIPAANTGES 144
Query: 121 TVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNF 180
            VF+YKMKGDY+RYLAEF  G+++KEAA NS+            +LPPTHPIRLGLALNF
Sbjct: 145 KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNF 204
Query: 181 SVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSD 237
           SVFYYEI+NSP+RAC LAK AFD+AI+ELDTL+EESYKDSTLIMQLLRDNLTLWTSD
Sbjct: 205 SVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261
>pdb|2BR9|A Chain A, 14-3-3 Protein Epsilon (Human) Complexed To Peptide Length = 234 Back     alignment and structure
>pdb|3UAL|A Chain A, Crystal Structure Of 14-3-3 Epsilon With Mlf1 Peptide Length = 232 Back     alignment and structure
>pdb|3AXY|C Chain C, Structure Of Florigen Activation Complex Consisting Of Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd Homolog Osfd1 Length = 240 Back     alignment and structure
>pdb|1O9C|A Chain A, Structural View Of A Fungal Toxin Acting On A 14-3-3 Regulatory Complex Length = 260 Back     alignment and structure
>pdb|4DX0|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY A PYRAZOLE Derivative Length = 243 Back     alignment and structure
>pdb|2O98|A Chain A, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 242 Back     alignment and structure
>pdb|3M50|A Chain A, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 240 Back     alignment and structure
>pdb|2V7D|A Chain A, 14-3-3 Protein Zeta In Complex With Thr758 Phosphorylated Integrin Beta2 Peptide Length = 247 Back     alignment and structure
>pdb|2BQ0|A Chain A, 14-3-3 Protein Beta (Human) Length = 245 Back     alignment and structure
>pdb|3RDH|A Chain A, X-Ray Induced Covalent Inhibition Of 14-3-3 Length = 248 Back     alignment and structure
>pdb|2C1J|A Chain A, Molecular Basis For The Recognition Of Phosphorylated And Phosphoacetylated Histone H3 By 14-3-3 Length = 258 Back     alignment and structure
>pdb|1A38|A Chain A, 14-3-3 Protein Zeta Bound To R18 Peptide Length = 245 Back     alignment and structure
>pdb|4FJ3|A Chain A, 14-3-3 Isoform Zeta In Complex With A Diphoyphorylated C-Raf Peptide Length = 235 Back     alignment and structure
>pdb|2O02|A Chain A, Phosphorylation Independent Interactions Between 14-3-3 And Exoenzyme S: From Structure To Pathogenesis Length = 230 Back     alignment and structure
>pdb|4GNT|A Chain A, Complex Of Chrebp And 14-3-3beta Length = 245 Back     alignment and structure
>pdb|3UZD|A Chain A, Crystal Structure Of 14-3-3 Gamma Length = 248 Back     alignment and structure
>pdb|2B05|A Chain A, Crystal Structure Of 14-3-3 Gamma In Complex With A Phosphoserine Peptide Length = 246 Back     alignment and structure
>pdb|2NPM|A Chain A, Crystal Structure Of Cryptosporidium Parvum 14-3-3 Protein In Complex With Peptide Length = 260 Back     alignment and structure
>pdb|4DNK|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN 5- Monooxygenase Activation Protein, Beta Polypeptide (Ywhab) From Homo Sapiens At 2.20 A Resolution. Length = 247 Back     alignment and structure
>pdb|2C63|A Chain A, 14-3-3 Protein Eta (Human) Complexed To Peptide Length = 247 Back     alignment and structure
>pdb|2BTP|A Chain A, 14-3-3 Protein Theta (Human) Complexed To Peptide Length = 256 Back     alignment and structure
>pdb|4E2E|A Chain A, Crystal Structure Of A Tyrosine 3-MonooxygenaseTRYPTOPHAN 5- Monooxygenase Activation Protein, Gamma Polypeptide (Ywhag) From Homo Sapiens At 2.25 A Resolution Length = 248 Back     alignment and structure
>pdb|3SMO|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN COMPLEX WITH Task-3 Peptide And Stabilizer Fusicoccin J Aglycone Length = 235 Back     alignment and structure
>pdb|3P1R|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38vN166H IN COMPLEX WITH Task-3 Peptide Length = 236 Back     alignment and structure
>pdb|3LW1|A Chain A, Binary Complex Of 14-3-3 Sigma And P53 Pt387-Peptide Length = 253 Back     alignment and structure
>pdb|1YWT|A Chain A, Crystal Structure Of The Human Sigma Isoform Of 14-3-3 In Complex With A Mode-1 Phosphopeptide Length = 248 Back     alignment and structure
>pdb|3P1P|A Chain A, Crystal Structure Of Human 14-3-3 Sigma C38nN166H IN COMPLEX WITH Task-3 Peptide Length = 236 Back     alignment and structure
>pdb|3O8I|A Chain A, Structure Of 14-3-3 Isoform Sigma In Complex With A C-Raf1 Peptide And A Stabilizing Small Molecule Fragment Length = 239 Back     alignment and structure
>pdb|3IQJ|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With Raf1 Peptide (10mer) Length = 236 Back     alignment and structure
>pdb|4HQW|A Chain A, Molecular Tweezers Modulate 14-3-3 Protein-protein Interactions Length = 236 Back     alignment and structure
>pdb|3P1N|A Chain A, Crystal Structure Of Human 14-3-3 Sigma In Complex With Task-3 Peptide Length = 235 Back     alignment and structure
>pdb|3T0L|A Chain A, Small-Molecule Inhibitors Of 14-3-3 Protein-Protein Interactions From Virtual Screening Length = 235 Back     alignment and structure
>pdb|4DAT|A Chain A, Structure Of 14-3-3 Sigma In Complex With Padi6 14-3-3 Binding Motif Ii Length = 234 Back     alignment and structure
>pdb|3U9X|A Chain A, Covalent Attachment Of Pyridoxal-Phosphate Derivatives To 14-3-3 Proteins Length = 235 Back     alignment and structure
>pdb|3EFZ|A Chain A, Crystal Structure Of A 14-3-3 Protein From Cryptosporidium Parvum (Cgd1_2980) Length = 268 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query247
3uzd_A248 14-3-3 protein gamma; structural genomics, SGC, st 1e-106
3iqu_A236 14-3-3 protein sigma; signal transuction, nucleus, 1e-105
2br9_A234 14-3-3E, 14-3-3 protein epsilon; cell regulator pr 1e-105
2npm_A260 14-3-3 domain containing protein; cell regulator p 1e-105
3ubw_A261 14-3-3E, 14-3-3 protein epsilon; adapter protein, 1e-105
1o9d_A260 14-3-3-like protein C; protein-binding, fusicoccin 1e-100
3efz_A268 14-3-3 protein; 14-3-3, cell regulation, structura 3e-97
2o8p_A227 14-3-3 domain containing protein; signaling protei 3e-88
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A* Length = 248 Back     alignment and structure
 Score =  307 bits (786), Expect = e-106
 Identities = 148/241 (61%), Positives = 186/241 (77%), Gaps = 2/241 (0%)

Query: 6   ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRI 65
           +RE  V  A+LAEQAERYD+M  AMKNV +L+  L+ EERNLLSV YKNV+GARR+SWR+
Sbjct: 3   DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRV 62

Query: 66  LSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAG--ESTVF 123
           +SSIEQK  A GNE   + ++ YR+K+E EL  +C D+++++D +LI + S    ES VF
Sbjct: 63  ISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVF 122

Query: 124 FYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVF 183
           + KMKGDYYRYLAE   G+++     +S KAY  A   ++  + PTHPIRLGLALN+SVF
Sbjct: 123 YLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVF 182

Query: 184 YYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGG 243
           YYEI N+PE+ACHLAK AFD+AI+ELDTLNE+SYKDSTLIMQLLRDNLTLWTSD  +D G
Sbjct: 183 YYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG 242

Query: 244 D 244
            
Sbjct: 243 G 243
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3p1s_A* 3p1r_A* 3p1q_A* 3p1p_A* 1ywt_A* 1yz5_A 2v7d_A* 2o02_A 1qja_A* 1a37_A 1a38_A 1a4o_A* 1ib1_A* ... Length = 236 Back     alignment and structure
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C* Length = 234 Back     alignment and structure
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum} Length = 260 Back     alignment and structure
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens} Length = 261 Back     alignment and structure
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A* Length = 260 Back     alignment and structure
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A* Length = 268 Back     alignment and structure
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1 Length = 227 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query247
3uzd_A248 14-3-3 protein gamma; structural genomics, SGC, st 100.0
3ubw_A261 14-3-3E, 14-3-3 protein epsilon; adapter protein, 100.0
3iqu_A236 14-3-3 protein sigma; signal transuction, nucleus, 100.0
1o9d_A260 14-3-3-like protein C; protein-binding, fusicoccin 100.0
2br9_A234 14-3-3E, 14-3-3 protein epsilon; cell regulator pr 100.0
2npm_A260 14-3-3 domain containing protein; cell regulator p 100.0
3efz_A268 14-3-3 protein; 14-3-3, cell regulation, structura 100.0
2o8p_A227 14-3-3 domain containing protein; signaling protei 100.0
3edt_B283 KLC 2, kinesin light chain 2; superhelical, struct 95.83
3vtx_A184 MAMA; tetratricopeptide repeats (TPR) containing p 95.47
3nf1_A311 KLC 1, kinesin light chain 1; TPR, structural geno 95.24
3u3w_A293 Transcriptional activator PLCR protein; ternary co 93.47
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 93.01
3hym_B330 Cell division cycle protein 16 homolog; APC, anaph 92.63
3ro2_A338 PINS homolog, G-protein-signaling modulator 2; TPR 92.4
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 91.83
4g1t_A472 Interferon-induced protein with tetratricopeptide 91.83
3qww_A433 SET and MYND domain-containing protein 2; methyltr 91.52
3fp2_A537 TPR repeat-containing protein YHR117W; TOM71, mito 91.51
3u4t_A272 TPR repeat-containing protein; structural genomics 91.14
3edt_B 283 KLC 2, kinesin light chain 2; superhelical, struct 90.88
1fch_A368 Peroxisomal targeting signal 1 receptor; protein-p 90.87
4i17_A228 Hypothetical protein; TPR repeats protein, structu 90.55
4a1s_A 411 PINS, partner of inscuteable; cell cycle, LGN, mit 90.44
3qww_A433 SET and MYND domain-containing protein 2; methyltr 90.31
3ulq_A383 Response regulator aspartate phosphatase F; tetrat 89.89
3n71_A490 Histone lysine methyltransferase SMYD1; heart deve 89.55
3ulq_A 383 Response regulator aspartate phosphatase F; tetrat 89.0
2gw1_A 514 Mitochondrial precursor proteins import receptor; 88.97
4abn_A 474 Tetratricopeptide repeat protein 5; P53 cofactor, 88.77
3ro3_A164 PINS homolog, G-protein-signaling modulator 2; asy 88.12
4gcn_A127 Protein STI-1; structural genomics, PSI-biology, m 87.15
3qwp_A429 SET and MYND domain-containing protein 3; SMYD3,SE 86.77
3sf4_A 406 G-protein-signaling modulator 2; tetratricopeptide 86.64
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 85.93
4eqf_A365 PEX5-related protein; accessory protein, tetratric 85.89
2q7f_A243 YRRB protein; TPR, protein binding; 2.49A {Bacillu 85.43
4a1s_A411 PINS, partner of inscuteable; cell cycle, LGN, mit 85.35
3q15_A 378 PSP28, response regulator aspartate phosphatase H; 85.21
3ieg_A359 DNAJ homolog subfamily C member 3; TPR motif, chap 85.14
2gw1_A514 Mitochondrial precursor proteins import receptor; 84.93
2qfc_A293 PLCR protein; TPR, HTH, transcription regulation; 84.53
3u4t_A272 TPR repeat-containing protein; structural genomics 84.11
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 84.07
4b4t_Q 434 26S proteasome regulatory subunit RPN6; hydrolase, 83.26
3q15_A378 PSP28, response regulator aspartate phosphatase H; 83.15
2ho1_A252 Type 4 fimbrial biogenesis protein PILF; type IV p 83.08
2xpi_A597 Anaphase-promoting complex subunit CUT9; cell cycl 82.93
3qky_A261 Outer membrane assembly lipoprotein YFIO; membrane 82.2
2xpi_A597 Anaphase-promoting complex subunit CUT9; cell cycl 81.91
1fch_A368 Peroxisomal targeting signal 1 receptor; protein-p 81.61
2pl2_A217 Hypothetical conserved protein TTC0263; TPR, prote 81.1
3sf4_A 406 G-protein-signaling modulator 2; tetratricopeptide 80.69
4eqf_A365 PEX5-related protein; accessory protein, tetratric 80.49
3rkv_A162 Putative peptidylprolyl isomerase; structural geno 80.25
3ro2_A338 PINS homolog, G-protein-signaling modulator 2; TPR 80.13
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A* Back     alignment and structure
Probab=100.00  E-value=3.5e-97  Score=650.40  Aligned_cols=237  Identities=62%  Similarity=0.997  Sum_probs=223.7

Q ss_pred             hHHhHHHHHHHHHHhCChHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhhCchHHHHHH
Q 025822            6 ERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRI   85 (247)
Q Consensus         6 ~re~l~~~aklaeq~ery~Dm~~~mk~~i~~~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~~~~i   85 (247)
                      +|++++|+||||+|||||+||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus         3 ~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~~~i   82 (248)
T 3uzd_A            3 DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMV   82 (248)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-HHHH
T ss_pred             cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHHHHH
Confidence            69999999999999999999999999999999999999999999999999999999999999999999877888889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC--chhhHHhhhcccccccchhcccCchhHHHHHHHHHHHHHHHHHHh
Q 025822           86 KEYRQKVESELSDICNDIMTVIDEHLIPSASAG--ESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAE  163 (247)
Q Consensus        86 ~~yk~ki~~EL~~~c~eii~lid~~Llp~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~~Y~~A~~~a~  163 (247)
                      ++||++|++||..+|++|+++||++|||.++++  |+||||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus        83 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~  162 (248)
T 3uzd_A           83 RAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISK  162 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999  999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccCCCCCC
Q 025822          164 ADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDG  242 (247)
Q Consensus       164 ~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~ilqlLrdNl~~W~~~~~~~~  242 (247)
                      ++||||||||||||||||||||||+|++++||.||++|||+||+++|+|+|++|+|+|+||||||||||+|+++.++++
T Consensus       163 ~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~~~~  241 (248)
T 3uzd_A          163 EHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDD  241 (248)
T ss_dssp             HHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-------
T ss_pred             hhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCcccc
Confidence            8999999999999999999999999999999999999999999999999999999999999999999999999977665
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens} Back     alignment and structure
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ... Back     alignment and structure
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A* Back     alignment and structure
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C* Back     alignment and structure
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum} Back     alignment and structure
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A* Back     alignment and structure
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1 Back     alignment and structure
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Back     alignment and structure
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A Back     alignment and structure
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} Back     alignment and structure
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} Back     alignment and structure
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Back     alignment and structure
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Back     alignment and structure
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A Back     alignment and structure
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Back     alignment and structure
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} Back     alignment and structure
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} Back     alignment and structure
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Back     alignment and structure
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} Back     alignment and structure
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} Back     alignment and structure
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Back     alignment and structure
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 Back     alignment and structure
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} Back     alignment and structure
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Back     alignment and structure
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Back     alignment and structure
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} Back     alignment and structure
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} Back     alignment and structure
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A Back     alignment and structure
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Back     alignment and structure
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} Back     alignment and structure
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} Back     alignment and structure
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A Back     alignment and structure
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} Back     alignment and structure
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} Back     alignment and structure
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} Back     alignment and structure
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Back     alignment and structure
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 247
d1o9da_236 a.118.7.1 (A:) 14-3-3-like protein C {Common tobac 1e-127
d2o02a1230 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) 1e-123
d3efza1223 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cry 1e-104
d2o8pa1220 a.118.7.1 (A:8-227) 14-3-3 domain containing prote 9e-97
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 236 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: 14-3-3 protein
family: 14-3-3 protein
domain: 14-3-3-like protein C
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

 Score =  357 bits (917), Expect = e-127
 Identities = 167/234 (71%), Positives = 198/234 (84%), Gaps = 2/234 (0%)

Query: 6   ERENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASW 63
            RE  VY+AKLAEQAERY+EMV+ M+ V+      ELTVEERNLLSV YKNVIGARRASW
Sbjct: 3   AREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASW 62

Query: 64  RILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVF 123
           RI+SSIEQKEE++GNE +   I+EYR K+E+ELS IC+ I+ ++D  LIPSA++G+S VF
Sbjct: 63  RIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVF 122

Query: 124 FYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTAAEADLPPTHPIRLGLALNFSVF 183
           + KMKGDY+RYLAEFK G E+KEAA +++ AY+ A   A  +L PTHPIRLGLALNFSVF
Sbjct: 123 YLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVF 182

Query: 184 YYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSD 237
           YYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD
Sbjct: 183 YYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 236
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]} Length = 230 Back     information, alignment and structure
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Length = 223 Back     information, alignment and structure
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]} Length = 220 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query247
d1o9da_236 14-3-3-like protein C {Common tobacco (Nicotiana t 100.0
d2o02a1230 zeta isoform {Cow (Bos taurus) [TaxId: 9913]} 100.0
d3efza1223 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [ 100.0
d2o8pa1220 14-3-3 domain containing protein cgd7_2470 {Crypto 100.0
d1fcha_323 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 91.97
d1tjca_95 Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human 83.15
d1kt1a1168 FKBP51, C-terminal domain {Monkey (Saimiri bolivie 83.09
d1elra_128 Hop {Human (Homo sapiens) [TaxId: 9606]} 82.49
d2hr2a1156 Hypothetical protein CT2138 {Chlorobium tepidum [T 80.97
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: 14-3-3 protein
family: 14-3-3 protein
domain: 14-3-3-like protein C
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=100.00  E-value=1.9e-89  Score=598.81  Aligned_cols=234  Identities=71%  Similarity=1.097  Sum_probs=223.4

Q ss_pred             chhHHhHHHHHHHHHHhCChHHHHHHHHHHHhc--CCCCCHHHHHHHHHHHhhhhhhhhHHHHHHHHHhhhhhhhCchHH
Q 025822            4 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVN   81 (247)
Q Consensus         4 ~~~re~l~~~aklaeq~ery~Dm~~~mk~~i~~--~~~Lt~eERnLls~ayKn~i~~~R~s~R~l~~~e~~~~~~~~~~~   81 (247)
                      +++|++++|+|||++|||||+||+.+||++++.  +++||.|||||||+||||+||++|+|||+|++++++++..+++.+
T Consensus         1 ~~~Re~lv~~AklaeqaeRy~dm~~~mk~v~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~r~l~~~e~k~~~~~~~~~   80 (236)
T d1o9da_           1 PTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEH   80 (236)
T ss_dssp             CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred             CCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHccCChHH
Confidence            357999999999999999999999999999987  789999999999999999999999999999999999988888889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhhHHhhhcccccccchhcccCchhHHHHHHHHHHHHHHHHH
Q 025822           82 AKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKAYETATTA  161 (247)
Q Consensus        82 ~~~i~~yk~ki~~EL~~~c~eii~lid~~Llp~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~~Y~~A~~~  161 (247)
                      ++.+++||++|++||..+|++|+++||++|+|.+++++++|||+|||||||||+|||..|+++++++++|.++|++|+++
T Consensus        81 ~~~i~~yk~kie~EL~~~C~~ii~lid~~Lip~~~~~eskvFy~KmkgDyyRYlaE~~~~~e~~~~~~~a~~aY~~A~~~  160 (236)
T d1o9da_          81 VNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI  160 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHhhchHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCcchhhhhhhhHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCccchHhHHHHHHHHHhhHhhhccC
Q 025822          162 AEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSD  237 (247)
Q Consensus       162 a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~ilqlLrdNl~~W~~~  237 (247)
                      |+++||||||+||||+||||||||||+|++++||++|++|||+|++++|++++++|+|+++|||||||||++|+++
T Consensus       161 a~~~l~pt~PirLgLaLN~SVF~yEi~~~~~~A~~lak~afd~ai~~~d~l~ee~~~ds~~i~qLLrdNl~lW~~e  236 (236)
T d1o9da_         161 ATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD  236 (236)
T ss_dssp             HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC-
T ss_pred             HHhcCCCCcHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHhcCC
Confidence            9989999999999999999999999999999999999999999999999999999999999999999999999985
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Back     information, alignment and structure
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} Back     information, alignment and structure