Citrus Sinensis ID: 025896

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240------
Protein Sequence
MTCSTGENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNKDA
Secondary Structure (PSIPRED)
cccccccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHccccccccEEEEcccccccccccHHHHHHHHHcccccccEEEEEccHHHHHHHHHccccEEEEcccccHHHHHHccccEEEcccccccHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHccccEEEEEEcccEEEccHHHHHHHHHHHHHHccccccccccHHHHHHccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHccccHHccEEEEcccccccccccHHHHHHHHHccccHccEEEEEccccHHHHHHHccccEEEEEccccHHHHHHccccEEEcccccHHHHHHHHHHcHHccc
Coil and Loop (DISEMBL)
mtcstgensveSKDALAKLAPLEAVLFdvdgtlcdsdplhHYAFREMLQEigfndgvpitedffveniagkhnidiakilfpddlprglkfcEDKEAMFRKLASEqlkpisgldKVKKWIEDrglkraavtnaprENAELMISKLGLSDFFQVVILGdecerakpfpdpyFKALEMLKvskdhtfvfedsVSGIKAGvaaglpvvglttrnpehvlleanptflikdyddpkLWSALEELDKNKDA
Flexible Loop (DISEMBL)
mtcstgensveSKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLaseqlkpisgldkvKKWIEDRGlkraavtnapreNAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEanptflikdydDPKLWSAleeldknkda
Low Complexity Region (SEG)
MTCSTGENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNKDA
Disordered region (IsUnstruct)
****************AKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSA**********
Disordered Region (DISOPRED)
***********************AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK****
Disordered Region (DISEMBL)
************KDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNKDA
Disordered Region (DISPRO)
****************AKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELD*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTCSTGENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNKDA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	246	2.2.26 [Sep-21-2011]
Q9X0Y1	216	Phosphorylated carbohydra	yes	no	0.796	0.907	0.328	8e-18
O33513	227	Protein CbbY OS=Rhodobact	yes	no	0.739	0.801	0.300	5e-14
P77475	188	Fructose-1-phosphate phos	N/A	no	0.707	0.925	0.306	6e-14
P44004	200	Uncharacterized protein H	yes	no	0.727	0.895	0.263	2e-13
Q3J8A0	225	Phosphoglycolate phosphat	yes	no	0.739	0.808	0.260	2e-12
O67359	213	Phosphoglycolate phosphat	yes	no	0.800	0.924	0.281	1e-11
Q48NS2	272	Phosphoglycolate phosphat	yes	no	0.776	0.702	0.270	2e-11
Q88A30	272	Phosphoglycolate phosphat	no	no	0.772	0.698	0.260	3e-11
Q9K6Y7	215	Pyrophosphatase PpaX OS=B	yes	no	0.760	0.869	0.275	4e-11
Q88QS2	272	Phosphoglycolate phosphat	no	no	0.865	0.783	0.267	5e-11

>sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1

 Score = 90.9 bits (224), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 17/213 (7%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           +EAV+FD+DG L D++PL+  A+R + +    + G P TED     I G    +   IL 
Sbjct: 1   MEAVIFDMDGVLMDTEPLYFEAYRRVAE----SYGKPYTEDLH-RRIMGVPEREGLPILM 55

Query: 82  -----PDDLPRGLKFC-EDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
                 D L    K   E+K+ +F    SE LK   G+ +  ++++ + +K A  T+ P+
Sbjct: 56  EALEIKDSLENFKKRVHEEKKRVF----SELLKENPGVREALEFVKSKRIKLALATSTPQ 111

Query: 136 ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK 195
             A   + +L L  +F V++ GD+ +  KP P+ Y   LE L V  +   VFEDS SG++
Sbjct: 112 REALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVE 171

Query: 196 AGVAAGLP-VVGLT-TRNPEHVLLEANPTFLIK 226
           A  +AG+  + G+  + N    LLEA    L+K
Sbjct: 172 AAKSAGIERIYGVVHSLNDGKALLEAGAVALVK 204

Displays high phosphatase activity toward erythrose 4-phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates.
Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: -

>sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1

 Score = 78.2 bits (191), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 93/193 (48%), Gaps = 11/193 (5%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDF--FVENIAGKHNIDIAKI 79
           L+A++FDVDGTL +++ +H  AF E     G  D     ED+   +    GK  +   + 
Sbjct: 3   LKALIFDVDGTLAETEEVHRQAFNETFAAQGL-DWYWSKEDYRTLLRTTGGKERMAKHRE 61

Query: 80  LFPDDLPRGLKFCEDKEAMFRK----LASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
                 P   K  +  +A  ++    +AS Q+  + G+ ++    +  GL+ A  T   R
Sbjct: 62  NLGSG-PSDAKIADLHKAKTQRYVEIIASGQVGLLPGVAELIDRAKASGLRLAIATTTTR 120

Query: 136 ENAELMISKL---GLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVS 192
            N + +I+        D F+V+  GDE  + KP PD Y +AL+ L +       FEDS +
Sbjct: 121 ANVDALIAATFSKPAGDIFEVIAAGDEVAQKKPAPDVYLRALQGLGLPPAACLAFEDSRA 180

Query: 193 GIKAGVAAGLPVV 205
           G+ +  AAGL VV
Sbjct: 181 GLASARAAGLRVV 193

Rhodobacter capsulatus (taxid: 1061)

>sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain K12) GN=yqaB PE=1 SV=1

 Score = 77.8 bits (190), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 9/183 (4%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKI-LFPD 83
           ++FD+DGT+ D++P H  A+RE+L   G    +   +     N +    I  A I L   
Sbjct: 8   LIFDMDGTILDTEPTHRKAWREVLGHYGLQYDI---QAMIALNGSPTWRIAQAIIELNQA 64

Query: 84  DL-PRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI 142
           DL P  L    +K    R +  + ++P+  +D VK W   R +  A  T +    AE ++
Sbjct: 65  DLDPHAL--AREKTEAVRSMLLDSVEPLPLVDVVKSWHGRRPM--AVGTGSESAIAEALL 120

Query: 143 SKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGL 202
           + LGL  +F  V+  D  +  KP PD +    + + V      VFED+  GI+A  AAG+
Sbjct: 121 AHLGLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGM 180

Query: 203 PVV 205
             V
Sbjct: 181 DAV 183

Catalyzes strongly the dephosphorylation of fructose-1-phosphate (Fru1P) and slightly the dephosphorylation of 6-phosphogluconate (6P-Glu). It has low beta-phosphoglucomutase activity.

Escherichia coli (strain K12) (taxid: 83333)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|P44004|Y488_HAEIN Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0488 PE=3 SV=1

 Score = 76.3 bits (186), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 105/197 (53%), Gaps = 18/197 (9%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDF---FVENIAGKHNIDIA 77
           P E ++FD+DGTL D+ P+H  A+  + ++ G+     I  +F    V  IAG+      
Sbjct: 9   PYEGLIFDMDGTLIDTMPVHAQAWTMVGKKFGYEFDFQIMYNFGGATVRTIAGE------ 62

Query: 78  KILFPDDLPRGLKFCEDKEAMFRKLASE----QLKPISGLDKVKKWIEDRGLKRAAVTNA 133
            ++   ++P  L   ED  A  R+L+ +    Q K +   + VK + + + +  A  + +
Sbjct: 63  -MMKAANMP--LDRIEDVLAAKRELSYQLIPTQSKLLPTFEIVKSFHQKKPI--ALGSGS 117

Query: 134 PRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSG 193
            R+  ++++ KL ++ +F  ++  D+ +  KP P+ + +  E+++ +     VFED+  G
Sbjct: 118 HRKIIDMLMDKLAIAPYFNAIVSADDVKEHKPHPETFLRCAELIQANPSRCIVFEDADLG 177

Query: 194 IKAGVAAGLPVVGLTTR 210
           ++AG++AG+ V  + TR
Sbjct: 178 VQAGLSAGMDVFDVRTR 194

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

>sp|Q3J8A0|GPH_NITOC Phosphoglycolate phosphatase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=Noc_2493 PE=3 SV=1

 Score = 72.8 bits (177), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 10/192 (5%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFP 82
           E +L DVDGTL DS P   +    M++ +G     P+  +  V    G     + K    
Sbjct: 6   EMILIDVDGTLVDSVPDLTFCTDTMMERLGL----PLRGETKVRQWVGNGVERLIKRALV 61

Query: 83  DDLPRGLK--FCEDKEAMFRKLASEQLKPIS----GLDKVKKWIEDRGLKRAAVTNAPRE 136
           D++    +    +  E +F  L ++     S    G+++   W++ +G +   VTN   +
Sbjct: 62  DNMEGEPEEDLYQKAETIFLALYADNTSKRSHLYPGVNEGLAWLKSQGYRVGCVTNKAAQ 121

Query: 137 NAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKA 196
               ++++LG+ D+F++VI GD     KP P P   A     ++ +   +  DS+S +KA
Sbjct: 122 FTYPLLTELGIIDYFEIVISGDTLPEKKPHPAPLLHAASHFGIAPEKALMIGDSISDVKA 181

Query: 197 GVAAGLPVVGLT 208
             AA   +V L+
Sbjct: 182 ARAANFQIVCLS 193

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) (taxid: 323261)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|O67359|GPH_AQUAE Phosphoglycolate phosphatase OS=Aquifex aeolicus (strain VF5) GN=gph PE=1 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 23/220 (10%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           +  +LFD+DGTL DS      A  + L+E+G  +  P   D   + I G     + K+L 
Sbjct: 1   MRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYP---DNVTKYIGGGVRALLEKVLK 57

Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQ----LKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
                   KF E+   +FRK   E      KP   +    + ++ +G K A V+N   E 
Sbjct: 58  D-------KFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEEL 110

Query: 138 AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAG 197
           ++ ++  L LS +F +++ GD     KP P P  K LE+L    +   +  D+ + I+AG
Sbjct: 111 SKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAG 170

Query: 198 VAAGLPV-------VGLTTRNPEHVLLEANPTFLIKDYDD 230
             AG          V L ++ P+  L  + P+ L+K  D+
Sbjct: 171 KRAGTKTALALWGYVKLNSQIPDFTL--SRPSDLVKLMDN 208

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate.

Aquifex aeolicus (strain VF5) (taxid: 224324)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|Q48NS2|GPH_PSE14 Phosphoglycolate phosphatase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=PSPPH_0648 PE=3 SV=2

 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 27/218 (12%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIG------------FNDGVPITEDFFVENIAGKH 72
           V+FD+DGTL DS P    A   ML E+G              +G P+     + N     
Sbjct: 16  VMFDLDGTLVDSVPDLAVAVDTMLAELGRPIAGLESVRAWVGNGAPVLVRRALANHLDHS 75

Query: 73  NIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPI--SGLDKVKKWIEDRGLKRAAV 130
            +D       D+L       +  E   R  A +    +   G+ +  KW++  G++ A +
Sbjct: 76  GVD-------DELAE-----QGLEIFMRAYAQKHEFTVVYPGVRETLKWLQKMGVEMALI 123

Query: 131 TNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDS 190
           TN P      ++ ++ L  FF+ +I GD   + KP P   F  ++M  V         DS
Sbjct: 124 TNKPERFVAPLLDEMKLGRFFRWIIGGDTMPQKKPDPAALFFVMKMAGVPASQALFVGDS 183

Query: 191 VSGIKAGVAAGLPVVGLTT-RNPEHVLLEANPTFLIKD 227
            S ++A  AAG+  V L+   N    + E NP  +I D
Sbjct: 184 RSDVQAAKAAGVACVALSYGYNHGRPIAEENPAMVIDD 221

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) (taxid: 264730)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|Q88A30|GPH_PSESM Phosphoglycolate phosphatase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_0567 PE=3 SV=2

 Score = 68.9 bits (167), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 29/219 (13%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIG------------FNDGVPITEDFFVENIAGKH 72
           ++FD+DGTL DS P    A   ML E+G              +G P+     + N     
Sbjct: 16  IMFDLDGTLVDSVPDLAVAVDTMLAELGRPTAGLESVRAWVGNGAPVLVRRALANNLDHS 75

Query: 73  NIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLK---PISGLDKVKKWIEDRGLKRAA 129
            +D A               E    +F +  +E+ +      G+ +  KW++  G++ A 
Sbjct: 76  GVDEA-------------LAERGLDIFMRAYAEKHEFTVVYPGVRETLKWLQKMGVEMAL 122

Query: 130 VTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFED 189
           +TN P      ++ ++ L  FF+ +I GD   + KP P   F  ++M  V    +    D
Sbjct: 123 ITNKPERFVAPLLDEMKLGRFFRWIIGGDTMPQKKPDPAALFFVMKMAGVPASQSLFVGD 182

Query: 190 SVSGIKAGVAAGLPVVGLTT-RNPEHVLLEANPTFLIKD 227
           S S ++A  AAG+  V L+   N    + E NP  +I D
Sbjct: 183 SRSDVQAAKAAGVACVALSYGYNHGRPIAEENPAMVIDD 221

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

Pseudomonas syringae pv. tomato (strain DC3000) (taxid: 223283)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

>sp|Q9K6Y7|PPAX_BACHD Pyrophosphatase PpaX OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=ppaX PE=3 SV=1

 Score = 68.6 bits (166), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 38/225 (16%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQ-----EIGFND-----GVPITEDFFVENIAGK 71
           +  VLFD+DGTL +++ L   +F    +     + G  D     G P+T+ F        
Sbjct: 3   INTVLFDLDGTLINTNELIISSFLHTFETYYPGKYGRKDAIECIGPPLTDSF-------- 54

Query: 72  HNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQ----LKPISGLDKVKKWIEDRGLKR 127
                 K L P+ +       E+  A +RK         ++P  G+ +  K + ++G K 
Sbjct: 55  ------KRLDPERV-------EEMVATYRKHNHAHHDKLVEPYEGVYETVKTLHEQGFKL 101

Query: 128 AAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF 187
           A VT   RE A   +   GL +FF V++  D+ E  KP P+P  KA+  L   K+ T + 
Sbjct: 102 AIVTTKIRETAMKGLKLFGLDEFFDVIVALDDVENVKPNPEPLEKAMNALGAKKEETIMV 161

Query: 188 EDSVSGIKAGVAAGL--PVVGLTTRNPEHVLLEANPTFLIKDYDD 230
            D+   I  G  AG+   VVG   R  ++V  + +P ++++   D
Sbjct: 162 GDNSHDILGGKNAGVKTAVVGYAIRGEDYV-RQFDPDYVLRSMPD 205

Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK/P. Might play a role in controlling the intracellular pyrophosphate pool.

Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) (taxid: 272558)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q88QS2|GPH_PSEPK Phosphoglycolate phosphatase OS=Pseudomonas putida (strain KT2440) GN=PP_0416 PE=3 SV=1

 Score = 68.2 bits (165), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 26/239 (10%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDD 84
           V+FD+DGTL DS P    A   ML E+G     P      V +  G      A++L    
Sbjct: 16  VMFDLDGTLIDSVPDLAAAVDRMLLELGR----PPAGLEAVRHWVGNG----AQVLVRRA 67

Query: 85  LPRGL-------KFCEDKEAMFRKLASE--QLKPI-SGLDKVKKWIEDRGLKRAAVTNAP 134
           L  G+          E   A+F    +E  +L  +  G+    +W+  +G++ A +TN P
Sbjct: 68  LAGGIDHADVDDALAEQALALFMDAYAESHELTVVYPGVRDTLRWLRKQGVEMALITNKP 127

Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
                 ++ ++ + +FF+ +I GD   + KP P      ++M  V+   +    DS S +
Sbjct: 128 ERFVGPLLDQMKIGNFFRWIIGGDTLPQKKPDPAALLFVMQMAGVTPQQSLFVGDSRSDV 187

Query: 195 KAGVAAGLPVVGLTTRNPEHVLLEA-NPTFLIKDYD-------DPKLWSALEELDKNKD 245
           +A  AAG+  VGLT        ++A +P+ +I D         DP     L +L  ++D
Sbjct: 188 QAAKAAGVQCVGLTYGYNHGRPIDAESPSLVIDDLRALLPGCADPATGITLADLQASQD 246

Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.

Pseudomonas putida (strain KT2440) (taxid: 160488)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	246
224138840	252	predicted protein [Populus trichocarpa]	1.0	0.976	0.805	1e-112
363807864	249	uncharacterized protein LOC100802762 [Gl	0.979	0.967	0.768	1e-107
224126367	232	predicted protein [Populus trichocarpa]	0.943	1.0	0.814	1e-107
118487049	245	unknown [Populus trichocarpa]	0.959	0.963	0.796	1e-107
255575764	250	2-deoxyglucose-6-phosphate phosphatase,	0.955	0.94	0.8	1e-106
388517963	244	unknown [Medicago truncatula]	0.975	0.983	0.766	1e-106
225427286	253	PREDICTED: uncharacterized protein HI_04	0.983	0.956	0.753	1e-106
357482283	245	Pyrophosphatase ppaX [Medicago truncatul	0.975	0.979	0.767	1e-106
359806366	249	uncharacterized protein LOC100793483 [Gl	0.995	0.983	0.757	1e-105
449464904	250	PREDICTED: uncharacterized protein HI_04	0.987	0.972	0.744	1e-105

>gi|224138840|ref|XP_002326703.1| predicted protein [Populus trichocarpa] gi|222834025|gb|EEE72502.1| predicted protein [Populus trichocarpa]

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/247 (80%), Positives = 219/247 (88%), Gaps = 1/247 (0%)

Query: 1   MTCSTGENSVESKD-ALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPI 59
           MT S+ EN V+    +L++LAPLEA+LFDVDGTLCDSDPLHHYAFREMLQEI FNDGVPI
Sbjct: 1   MTVSSAENIVDDATFSLSRLAPLEAILFDVDGTLCDSDPLHHYAFREMLQEINFNDGVPI 60

Query: 60  TEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKW 119
           TE+FFV+NIAGKHN DIA  LFPDDL RGLKF EDKEAMFR+LASEQLKPI+GL K+KKW
Sbjct: 61  TEEFFVQNIAGKHNEDIALSLFPDDLQRGLKFTEDKEAMFRRLASEQLKPINGLYKLKKW 120

Query: 120 IEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV 179
           +EDRGLKRAAVTNAPR NAELMIS LGLSDFF  VI+GDEC+ AKP P+PY KALE+L V
Sbjct: 121 VEDRGLKRAAVTNAPRANAELMISLLGLSDFFHAVIIGDECQHAKPHPEPYLKALEVLNV 180

Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE 239
           SKDHTFV EDSVSGIKAGVAAG+PVVGLTTRNPEH+LLEA PT LIKDY+DPKLW+ALEE
Sbjct: 181 SKDHTFVCEDSVSGIKAGVAAGMPVVGLTTRNPEHLLLEAKPTLLIKDYEDPKLWTALEE 240

Query: 240 LDKNKDA 246
           LDK   A
Sbjct: 241 LDKQAAA 247

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807864|ref|NP_001242699.1| uncharacterized protein LOC100802762 [Glycine max] gi|255644908|gb|ACU22954.1| unknown [Glycine max]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/242 (76%), Positives = 215/242 (88%), Gaps = 1/242 (0%)

Query: 1   MTCSTGENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPIT 60
           MT S+ EN V S+ +L +LAPLEAVLFD+DGTLCDSDPLH+YAFREML EIGFN+GVPIT
Sbjct: 1   MTVSS-ENCVSSQSSLTRLAPLEAVLFDIDGTLCDSDPLHYYAFREMLLEIGFNEGVPIT 59

Query: 61  EDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWI 120
           E+FF+E +AGKHN DIA +LFP DL RGLKF +DKEAMFR+LA+EQ++P++GLDKV+KWI
Sbjct: 60  EEFFIETVAGKHNDDIASVLFPGDLERGLKFVDDKEAMFRRLAAEQVRPLNGLDKVRKWI 119

Query: 121 EDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS 180
           E+ GLKRAAVTNAPR NAELMIS LGLSDFF  VI+G ECERAKP PDPY K LE LK S
Sbjct: 120 ENHGLKRAAVTNAPRANAELMISILGLSDFFDAVIIGGECERAKPHPDPYLKGLEALKAS 179

Query: 181 KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL 240
           KDHTFVFEDSVSGIKAGVAAG+PV+G+ TRNPE++L+EA P FLIKDY+DPKLW+ALEEL
Sbjct: 180 KDHTFVFEDSVSGIKAGVAAGMPVIGIATRNPENLLMEAKPAFLIKDYEDPKLWAALEEL 239

Query: 241 DK 242
           DK
Sbjct: 240 DK 241

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126367|ref|XP_002329536.1| predicted protein [Populus trichocarpa] gi|222870245|gb|EEF07376.1| predicted protein [Populus trichocarpa]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 189/232 (81%), Positives = 211/232 (90%)

Query: 12  SKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGK 71
           SK +L+KLAPLEAVLFDVDGTLCDSDPLH+YAFREMLQEI FNDGVPITE+FFV+NIAGK
Sbjct: 1   SKISLSKLAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNDGVPITEEFFVKNIAGK 60

Query: 72  HNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVT 131
           HN DIA +LFPDDL RGLKF +DKE MFR+LASEQLKP++G+ K+KKW+ED GLKRAAVT
Sbjct: 61  HNEDIALLLFPDDLQRGLKFMDDKETMFRRLASEQLKPVNGIYKLKKWVEDHGLKRAAVT 120

Query: 132 NAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
           NAPR NAELMIS LGLSDFF  VILGD+CE AKP P+PY KALE+L VSKDHTFV EDSV
Sbjct: 121 NAPRANAELMISLLGLSDFFDAVILGDDCEHAKPHPEPYLKALEVLNVSKDHTFVCEDSV 180

Query: 192 SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKN 243
           SGIKAGVAAG+PVVGLTTRNPEH+L+EA PT +IKDY+DPKLW+ALEELDK 
Sbjct: 181 SGIKAGVAAGMPVVGLTTRNPEHLLMEAKPTLIIKDYEDPKLWTALEELDKQ 232

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487049|gb|ABK95355.1| unknown [Populus trichocarpa]

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/236 (79%), Positives = 213/236 (90%)

Query: 11  ESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAG 70
           ++K +L+KLAPLEAVLFDVDGTLCDSDPLH+YAFREMLQEI FNDGVPITE+FFV+NIAG
Sbjct: 5   DTKISLSKLAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNDGVPITEEFFVKNIAG 64

Query: 71  KHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAV 130
           KHN DIA +LFPDDL RGLKF +DKE MFR+LASEQLKP++G+ K+KKW+ED GLKRAAV
Sbjct: 65  KHNEDIALLLFPDDLQRGLKFMDDKETMFRRLASEQLKPVNGIYKLKKWVEDHGLKRAAV 124

Query: 131 TNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDS 190
           TNAPR NAELMIS LGLSDFF  VILGD+CE AKP P+PY KALE+L VSKDHTFV EDS
Sbjct: 125 TNAPRANAELMISLLGLSDFFDAVILGDDCEHAKPHPEPYLKALEVLNVSKDHTFVCEDS 184

Query: 191 VSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNKDA 246
           VSGIKAGVAAG+PVVGLTTRNPEH+L+EA PT +IKDY+DP LW+ALEELDK + A
Sbjct: 185 VSGIKAGVAAGMPVVGLTTRNPEHLLMEAKPTLIIKDYEDPNLWTALEELDKQEAA 240

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575764|ref|XP_002528781.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223531784|gb|EEF33603.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/235 (80%), Positives = 211/235 (89%)

Query: 12  SKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGK 71
           SK +L++LAPL+AVLFDVDGTLCDSDPLHHYAFREMLQEI FN GVPITE+FF++NIAGK
Sbjct: 11  SKSSLSRLAPLQAVLFDVDGTLCDSDPLHHYAFREMLQEINFNGGVPITEEFFIQNIAGK 70

Query: 72  HNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVT 131
           HN +IA  LFPDD  RGLKF  DKEAMFRKLASEQL  I+GL K+KKWIEDRGLKRAAVT
Sbjct: 71  HNDEIALRLFPDDFQRGLKFTVDKEAMFRKLASEQLTAINGLYKLKKWIEDRGLKRAAVT 130

Query: 132 NAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
           NAPR NAELMISKLGL+DFF  VI+GDEC  AKP P+PY KALE+LKVSKDHTF+FEDSV
Sbjct: 131 NAPRPNAELMISKLGLADFFDAVIIGDECVHAKPHPEPYLKALEVLKVSKDHTFIFEDSV 190

Query: 192 SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNKDA 246
           SGIKAGVAAG+PVVGL+TRNPE VL+EA PTFLIKDY+DPKLW+ALEE+D+ + A
Sbjct: 191 SGIKAGVAAGMPVVGLSTRNPEDVLMEAKPTFLIKDYEDPKLWAALEEVDRKEGA 245

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517963|gb|AFK47043.1| unknown [Medicago truncatula]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/240 (76%), Positives = 212/240 (88%)

Query: 4   STGENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDF 63
           +T EN+VESK +L KLAP+EAVLFD+DGTLCDSDP+H+YAFREMLQEIGFN G PITE+F
Sbjct: 2   ATSENAVESKSSLTKLAPIEAVLFDIDGTLCDSDPIHYYAFREMLQEIGFNGGNPITEEF 61

Query: 64  FVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDR 123
           F+  +AGKHN DIA  L P D  RGLKF EDKEAMFR+LA+EQLKP++GLDKV+KWIEDR
Sbjct: 62  FIATVAGKHNDDIALDLLPGDRERGLKFVEDKEAMFRRLAAEQLKPLNGLDKVRKWIEDR 121

Query: 124 GLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH 183
           GLKRAAVTNAPR NAEL++SKLGLSDFF  VI+GDECE AKP P+PY K LE LK SKDH
Sbjct: 122 GLKRAAVTNAPRPNAELILSKLGLSDFFHAVIIGDECEHAKPHPEPYLKGLEALKASKDH 181

Query: 184 TFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKN 243
           TF+FEDSVSGIKAGVAAG+PV+G++TRNPE +L+ A P FLIKDYDDPKLW+ALEELDK+
Sbjct: 182 TFIFEDSVSGIKAGVAAGMPVIGISTRNPEDLLMGAKPAFLIKDYDDPKLWAALEELDKS 241

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427286|ref|XP_002281714.1| PREDICTED: uncharacterized protein HI_0488 [Vitis vinifera] gi|297742145|emb|CBI33932.3| unnamed protein product [Vitis vinifera]

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 183/243 (75%), Positives = 216/243 (88%), Gaps = 1/243 (0%)

Query: 1   MTCSTGENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPIT 60
           MT S+GENS +SK +L+ LAPLEAVLFD+DGTLCDSDPLH+YAFRE+L +IG+N GVPIT
Sbjct: 1   MTVSSGENSADSKCSLSGLAPLEAVLFDIDGTLCDSDPLHYYAFRELLLQIGYNGGVPIT 60

Query: 61  EDFFVENIAGKHNIDIAKILFPD-DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKW 119
           E+FF+ENIAGKH  D+A+ +FPD DL +GLKF +DKEA+FRK A EQ+KP+ GL K++KW
Sbjct: 61  EEFFIENIAGKHGDDVARGIFPDWDLEKGLKFMDDKEALFRKFAKEQVKPLDGLHKIRKW 120

Query: 120 IEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV 179
           IEDRGLKRAAVTNAPR NAELMIS LGLSDFFQ V++G EC+RAKPFPDPY KALE+L+V
Sbjct: 121 IEDRGLKRAAVTNAPRPNAELMISLLGLSDFFQAVVIGSECDRAKPFPDPYLKALEVLQV 180

Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE 239
           SKD TF+FEDS SGIKAGVAAG+PVVGLTTRNPE +L+EA P FLI+DYDDPKLW+AL E
Sbjct: 181 SKDSTFIFEDSASGIKAGVAAGMPVVGLTTRNPESLLMEAKPVFLIRDYDDPKLWAALAE 240

Query: 240 LDK 242
           LD+
Sbjct: 241 LDQ 243

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357482283|ref|XP_003611427.1| Pyrophosphatase ppaX [Medicago truncatula] gi|355512762|gb|AES94385.1| Pyrophosphatase ppaX [Medicago truncatula]

 Score =  388 bits (997), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/241 (76%), Positives = 213/241 (88%), Gaps = 1/241 (0%)

Query: 4   STGENSVES-KDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITED 62
           +T EN+VES K +L KLAP+EAVLFD+DGTLCDSDP+H+YAFREMLQEIGFN G PITE+
Sbjct: 2   ATSENAVESSKSSLTKLAPIEAVLFDIDGTLCDSDPIHYYAFREMLQEIGFNGGNPITEE 61

Query: 63  FFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIED 122
           FF+  +AGKHN DIA  LFP D  RGLKF EDKEAMFR+LA+EQLKP++GLDKV+KWIED
Sbjct: 62  FFIATVAGKHNDDIALDLFPGDRERGLKFVEDKEAMFRRLAAEQLKPLNGLDKVRKWIED 121

Query: 123 RGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKD 182
           RGLKRAAVTNAPR NAEL++SKLGLSDFF  VI+GDECE AKP P+PY K LE LK SKD
Sbjct: 122 RGLKRAAVTNAPRPNAELILSKLGLSDFFHAVIIGDECEHAKPHPEPYLKGLEALKASKD 181

Query: 183 HTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK 242
           HTF+FEDSVSGIKAGVAAG+PV+G++TRNPE +L+ A P FLIKDYDDPKLW+ALEELDK
Sbjct: 182 HTFIFEDSVSGIKAGVAAGMPVIGISTRNPEDLLMGAKPAFLIKDYDDPKLWAALEELDK 241

Query: 243 N 243
           +
Sbjct: 242 S 242

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806366|ref|NP_001240977.1| uncharacterized protein LOC100793483 [Glycine max] gi|255635054|gb|ACU17885.1| unknown [Glycine max]

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/247 (75%), Positives = 213/247 (86%), Gaps = 2/247 (0%)

Query: 1   MTCSTGENSVES-KDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPI 59
           MT S+ EN V S + +L  LAPLEAVLFD+DGTLCDSDPLH+YAFREML EIGFN GVPI
Sbjct: 1   MTVSS-ENGVSSGQSSLTGLAPLEAVLFDIDGTLCDSDPLHYYAFREMLLEIGFNGGVPI 59

Query: 60  TEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKW 119
           +E+FF++ +AGKHN DIA +LFP DL RGLKF +DKEAMFR+LA+EQLKP++GLDKV+KW
Sbjct: 60  SEEFFIDTVAGKHNDDIALVLFPGDLERGLKFVDDKEAMFRRLAAEQLKPLNGLDKVRKW 119

Query: 120 IEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV 179
           IE+ GLKRAAVTNAPR NAELMIS LGLSDFF  VI+G ECE AKP PDPY K LE LK 
Sbjct: 120 IENHGLKRAAVTNAPRANAELMISILGLSDFFDAVIIGGECEHAKPHPDPYLKGLEALKA 179

Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE 239
           SKDHTFVFEDSVSGIKAGVAAG+PV+GL TRNPE++L+EA P FLIKDY+DPKLW+ALEE
Sbjct: 180 SKDHTFVFEDSVSGIKAGVAAGMPVIGLATRNPENLLMEAKPAFLIKDYEDPKLWAALEE 239

Query: 240 LDKNKDA 246
           LDK   A
Sbjct: 240 LDKATSA 246

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464904|ref|XP_004150169.1| PREDICTED: uncharacterized protein HI_0488-like [Cucumis sativus] gi|449513559|ref|XP_004164357.1| PREDICTED: uncharacterized protein HI_0488-like [Cucumis sativus]

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/243 (74%), Positives = 212/243 (87%)

Query: 1   MTCSTGENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPIT 60
           MT S  E SV+SK +LA LAP+EAVLFDVDGTLCDSDPLH+YAFREMLQEIGFN GVPI 
Sbjct: 1   MTASKNEISVDSKSSLAALAPVEAVLFDVDGTLCDSDPLHYYAFREMLQEIGFNGGVPID 60

Query: 61  EDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWI 120
           E+FF++N+AGKHN DIA+ LFPDD  RGLKFC++KEAMFR+L +EQLKP+ GL KVKKWI
Sbjct: 61  EEFFIKNVAGKHNDDIARALFPDDFERGLKFCDEKEAMFRRLVTEQLKPVDGLYKVKKWI 120

Query: 121 EDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS 180
           EDRGLKRAAVTNAPR NAELMIS LGL DFF+ +I+G EC+ AKP P+PY KALE+LKVS
Sbjct: 121 EDRGLKRAAVTNAPRPNAELMISMLGLKDFFEAIIIGGECKHAKPHPEPYLKALEVLKVS 180

Query: 181 KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL 240
           K+HTF+FEDS SGIKAGVAA +PVVG+ TRNPE +L++A PT ++KDYDD KLW+AL+EL
Sbjct: 181 KEHTFIFEDSASGIKAGVAAEMPVVGIATRNPEQLLMQAKPTLVVKDYDDLKLWAALDEL 240

Query: 241 DKN 243
           DK 
Sbjct: 241 DKR 243

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	246
TAIR|locus:2064133	244	AT2G38740 [Arabidopsis thalian	0.959	0.967	0.725	1.5e-92
TIGR_CMR|BA_4427	221	BA_4427 "hydrolase, haloacid d	0.861	0.959	0.288	7.5e-18
TIGR_CMR|DET_0395	456	DET_0395 "glycoprotease family	0.804	0.434	0.261	1e-17
UNIPROTKB|P77475	188	yqaB [Escherichia coli K-12 (t	0.703	0.920	0.309	1.3e-15
TAIR|locus:2010728	1055	AT1G56500 [Arabidopsis thalian	0.813	0.189	0.283	8.7e-15
TAIR|locus:2119647	379	FMN/FHY "riboflavin kinase/FMN	0.853	0.554	0.290	3.3e-14
ZFIN|ZDB-GENE-050522-36	226	hdhd1 "haloacid dehalogenase-l	0.825	0.898	0.273	7.9e-14
UNIPROTKB|Q9KN63	219	VC_A0102 "CbbY family protein"	0.764	0.858	0.273	1.6e-13
TIGR_CMR|VC_A0102	219	VC_A0102 "haloacid dehalogenas	0.764	0.858	0.273	1.6e-13
TIGR_CMR|GSU_1839	228	GSU_1839 "hydrolase, haloacid	0.756	0.815	0.280	4.4e-13

TAIR|locus:2064133 AT2G38740 [Arabidopsis thaliana (taxid:3702)]

 Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
 Identities = 172/237 (72%), Positives = 206/237 (86%)

Query:     8 NSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVEN 67
             N  ESK +L++LAPLEA+LFDVDGTLCDSDP+H  AF+E+LQEIGFN+GVPI E FFVEN
Sbjct:     8 NPSESKPSLSQLAPLEAILFDVDGTLCDSDPIHLIAFQELLQEIGFNNGVPIDEKFFVEN 67

Query:    68 IAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKR 127
             IAGKHN +IA +LFPDD+ RGLKFC++KEA++RK+ +E++KP+ GL K+ KWIEDRGLKR
Sbjct:    68 IAGKHNSEIALLLFPDDVSRGLKFCDEKEALYRKIVAEKIKPLDGLIKLTKWIEDRGLKR 127

Query:   128 AAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF 187
             AAVTNAP+ENAELMISKLGL+DFFQ VILG ECE  KP P PY KALE+L VSK+HT VF
Sbjct:   128 AAVTNAPKENAELMISKLGLTDFFQAVILGSECEFPKPHPGPYLKALEVLNVSKEHTLVF 187

Query:   188 EDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNK 244
             EDS+SGIKAGVAAG+PV+GLTT NP  +L++A P FLI++Y DPKLW+ LEELD NK
Sbjct:   188 EDSISGIKAGVAAGMPVIGLTTGNPASLLMQAKPAFLIENYADPKLWAVLEELD-NK 243

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TIGR_CMR|BA_4427 BA_4427 "hydrolase, haloacid dehalogenase-like family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 66/229 (28%), Positives = 120/229 (52%)

Query:    22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
             ++A++FD DG + D++ +  ++FR+ ++E G  D +P+ E  F + I    ++     L+
Sbjct:     2 MKAIIFDFDGLIVDTETIWFHSFRDAVREYG-GD-LPLEE--FAKCIGTTDDV-----LY 52

Query:    82 PDDLPRGLKFCEDKEAMFRK---LASEQLKPISGLDKVKKWIEDR---GLKRAAVTNAPR 135
              + L   LK   DK A+  K   L  E++K     D VK+++E+    GLK A  +++ R
Sbjct:    53 -EYLNEQLKEKFDKYALKEKVKNLHKEKMKIPEARDGVKEYLEEAKEMGLKIALASSSSR 111

Query:   136 ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK 195
             E     + +L + D+F+V+   ++ E+ KP P  Y  A+E L +       FEDS++G+K
Sbjct:   112 EWVIPFLEELQIRDYFEVIKTREDVEKVKPDPALYRVAIEDLGIDSSEAVAFEDSLNGLK 171

Query:   196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNK 244
             A +AAGL  V +      ++  E N    I+   D  L   ++ + K++
Sbjct:   172 AAIAAGLTCVVVPNDVTRNLPFE-NHHLRIESMKDKSLKEVMQNIKKDR 219

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

TIGR_CMR|DET_0395 DET_0395 "glycoprotease family protein/hydrolase, beta-phosphoglucomutase family" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 222 (83.2 bits), Expect = 1.0e-17, P = 1.0e-17
 Identities = 53/203 (26%), Positives = 103/203 (50%)

Query:    19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAK 78
             L+  +AV++D+DG + DS P H  A++    EIG+      +E  F      ++++ I  
Sbjct:   234 LSQNKAVIWDMDGVIADSAPFHMRAWQTTFAEIGYT----FSEADFYRTFGLRNDMIIYS 289

Query:    79 ILFP-DDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
             +L    D        + KE +FR+ A ++++   G+ ++ K ++  G + A  ++AP  N
Sbjct:   290 VLGEKSDADTIHTLADRKEHLFREYAGQEIQLFPGVIELLKSLKTAGYRMAIASSAPLAN 349

Query:   138 AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAG 197
              +L+++KLG+ D+F   +   +  + KP P  +  +   L  S +   V ED+ +G++A 
Sbjct:   350 IKLVMTKLGIGDYFLATVSEKDVTKGKPNPQIFLLSAARLCASPEECLVIEDAPAGVEAA 409

Query:   198 VAAGLPVVGLTTRNPEHVLLEAN 220
               AG+  + +T       L EA+
Sbjct:   410 KKAGMKCIAVTNSQQPQALSEAD 432

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0006508 "proteolysis" evidence=ISS

GO:0008233 "peptidase activity" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

UNIPROTKB|P77475 yqaB [Escherichia coli K-12 (taxid:83333)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 57/184 (30%), Positives = 89/184 (48%)

Query:    25 VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKI-LFPD 83
             ++FD+DGT+ D++P H  A+RE+L   G    +   +     N +    I  A I L   
Sbjct:     8 LIFDMDGTILDTEPTHRKAWREVLGHYGLQYDI---QAMIALNGSPTWRIAQAIIELNQA 64

Query:    84 DL-PRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAV-TNAPRENAELM 141
             DL P  L    +K    R +  + ++P+  +D VK W    G +  AV T +    AE +
Sbjct:    65 DLDPHAL--AREKTEAVRSMLLDSVEPLPLVDVVKSW---HGRRPMAVGTGSESAIAEAL 119

Query:   142 ISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAG 201
             ++ LGL  +F  V+  D  +  KP PD +    + + V      VFED+  GI+A  AAG
Sbjct:   120 LAHLGLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAG 179

Query:   202 LPVV 205
             +  V
Sbjct:   180 MDAV 183

GO:0008801 "beta-phosphoglucomutase activity" evidence=IDA

GO:0016791 "phosphatase activity" evidence=IDA

GO:0016311 "dephosphorylation" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

TAIR|locus:2010728 AT1G56500 [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 8.7e-15, P = 8.7e-15
 Identities = 60/212 (28%), Positives = 103/212 (48%)

Query:    22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
             + AVLFD+DG LC+S+ L   A  ++  E+G    V +T D FV  +       +  +  
Sbjct:    74 VSAVLFDMDGVLCNSEDLSRRAAVDVFTEMG----VEVTVDDFVPFMGTGEAKFLGGVAS 129

Query:    82 PDDLPRGLKFCEDKEAMFRKLASEQLKPISGLD-----KVKKWIEDRGLKRAAVTNAPRE 136
               ++ +G      KE  F     +  KP SG+      ++    +++GLK A  ++A R 
Sbjct:   130 VKEV-KGFDPDAAKERFFEIYLDKYAKPESGIGFPGALELVTECKNKGLKVAVASSADRI 188

Query:   137 NAELMISKLGLS-DFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK 195
               +  +   GLS   F  ++  D  E  KP PD +  A ++L V      V ED+++G++
Sbjct:   189 KVDANLKAAGLSLTMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQ 248

Query:   196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD 227
             A  AA +  + + T   E +L +A P+ +I+D
Sbjct:   249 AAQAANMRCIAVKTTLSEAILKDAGPS-MIRD 279

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0009773 "photosynthetic electron transport in photosystem I" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

TAIR|locus:2119647 FMN/FHY "riboflavin kinase/FMN hydrolase" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 3.3e-14, P = 3.3e-14
 Identities = 65/224 (29%), Positives = 110/224 (49%)

Query:    14 DALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFN-DGVPITEDFFVENIAGKH 72
             ++L KL+    VL D+DGTL ++D +     R+ L + G   DG    E      I GK 
Sbjct:     5 NSLKKLS--SCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDG---RESL---KIVGKT 56

Query:    73 NIDIAKILFPD-DLPRGL-KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAV 130
              ++ A  +  D +LP  + +F  +   +F     +++K + G +++ + ++  G+  A  
Sbjct:    57 PVEAATTIVEDYELPCKVDEFNSEFYPLF-SAQMDKIKSLPGANRLIRHLKCHGVPVALA 115

Query:   131 TNAPRENAELMIS-KLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFED 189
             +N+ R N E  IS   G  + F V++  DE  + KP PD + +A + LK       V ED
Sbjct:   116 SNSSRANIESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIED 175

Query:   190 SVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKL 233
             SV G+ AG AAG  V+ + +  P+   L  +   +I    D +L
Sbjct:   176 SVPGVMAGKAAGTKVIAVPSL-PKQTHLYTSADEVINSLLDIRL 218

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA;ISS;IDA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

GO:0003919 "FMN adenylyltransferase activity" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

ZFIN|ZDB-GENE-050522-36 hdhd1 "haloacid dehalogenase-like hydrolase domain containing 1" [Danio rerio (taxid:7955)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 62/227 (27%), Positives = 113/227 (49%)

Query:    21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL 80
             P+  VLFD+DG L D++ L+  +F+E+     FN     T +    ++ GK  +D A+I+
Sbjct:     5 PVTHVLFDMDGLLLDTERLYTVSFQEVCDR--FNK--QYTWEV-KSSVMGKKALDAARII 59

Query:    81 FPDDLPRGLKFCEDKEAMFRKLASEQLKP----ISGLDKVKKWIEDRGLKRAAVTNAPRE 136
               D +  GL    ++     +   E+L P    + G++K+   +   G+  A  T++   
Sbjct:    60 -RDKI--GLPMTPEELLEETRKIQERLFPTTSLLPGVEKLVNHLHKHGIPIAVGTSSAGL 116

Query:   137 NAELMISKLGLSDFFQV---VILGDE--CERAKPFPDPYFKALEMLK--VSKDHTFVFED 189
               E+  S+    +FF +   ++LGD+   +  KP PD +    +      +     VFED
Sbjct:   117 TFEMKTSRH--KEFFSLFSHIVLGDDPDVKNGKPLPDTFLVCAKRFSPPANPKQCLVFED 174

Query:   190 SVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD--PKLW 234
             + +G+KAG+AAG+ VV +   N +  L +   T L++  +D  P+L+
Sbjct:   175 APNGVKAGLAAGMQVVMIPDDNLDRSLTQ-EATLLLRSMEDFRPELF 220

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q9KN63 VC_A0102 "CbbY family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 55/201 (27%), Positives = 96/201 (47%)

Query:    23 EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL-- 80
             +A +FD+DG L D++ +    F+E     G    +P  ++ ++ ++ G +   I  IL  
Sbjct:     7 QAAIFDMDGLLLDTERVCMRVFQEACTACG----LPFRQEVYL-SVIGCNAKTINGILSQ 61

Query:    81 -FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAE 139
              + +DLPR     E ++     +  E +    G+  + +W++ R +  A  T+  +E A 
Sbjct:    62 AYGEDLPR--LHNEWRQRYNAVVMHEAIPHKDGVIALLEWLKARSIPVAVATSTQKEVAL 119

Query:   140 LMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVA 199
             + +   GL  +F  +  G E  + KP P+ Y  A E L V       FEDS +GIKA +A
Sbjct:   120 IKLQLAGLDHYFANITTGCEVTQGKPHPEIYLLAAERLGVEPQQCLAFEDSNNGIKAAMA 179

Query:   200 AGL---PVVGLTTRNPEHVLL 217
             A +    +  L   +PE + L
Sbjct:   180 AQMHAFQIPDLVKPSPEVIAL 200

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

TIGR_CMR|VC_A0102 VC_A0102 "haloacid dehalogenase/epoxide hydrolase family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 55/201 (27%), Positives = 96/201 (47%)

Query:    23 EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL-- 80
             +A +FD+DG L D++ +    F+E     G    +P  ++ ++ ++ G +   I  IL  
Sbjct:     7 QAAIFDMDGLLLDTERVCMRVFQEACTACG----LPFRQEVYL-SVIGCNAKTINGILSQ 61

Query:    81 -FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAE 139
              + +DLPR     E ++     +  E +    G+  + +W++ R +  A  T+  +E A 
Sbjct:    62 AYGEDLPR--LHNEWRQRYNAVVMHEAIPHKDGVIALLEWLKARSIPVAVATSTQKEVAL 119

Query:   140 LMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVA 199
             + +   GL  +F  +  G E  + KP P+ Y  A E L V       FEDS +GIKA +A
Sbjct:   120 IKLQLAGLDHYFANITTGCEVTQGKPHPEIYLLAAERLGVEPQQCLAFEDSNNGIKAAMA 179

Query:   200 AGL---PVVGLTTRNPEHVLL 217
             A +    +  L   +PE + L
Sbjct:   180 AQMHAFQIPDLVKPSPEVIAL 200

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

TIGR_CMR|GSU_1839 GSU_1839 "hydrolase, haloacid dehalogenase-like family" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 57/203 (28%), Positives = 99/203 (48%)

Query:    22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
             L AV+FD DG + D++PLH+ AF+ +L+ IGF      + + +V+   G  + D  +  F
Sbjct:     2 LSAVIFDFDGIIVDTEPLHYRAFQAILEPIGFG----YSWEAYVDVYMGYDDRDAFREAF 57

Query:    82 P---DDLP-RGLK-FCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRE 136
                  DL  R L+     K A F+++ +  + P  G+ ++ + I+      A  + A R 
Sbjct:    58 RVRGADLEDRELEGLIARKAAAFQEIIASGVTPYPGVVELIRNIKANH-PVALCSGALRS 116

Query:   137 NAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEML-------KVSKDHTFVFED 189
             +   ++  LGLS  F V++  DE   +KP P  Y  A+  L       ++  +     ED
Sbjct:   117 DILPILEGLGLSGIFDVMVTADEVSASKPDPASYALAVRRLTAAFPNRQIRPETCIAIED 176

Query:   190 SVSGIKAGVAAGLPVVGLTTRNP 212
             + +GI +   AG+ V+ +T   P
Sbjct:   177 TPAGIASATGAGIGVLAVTNSYP 199

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	246
PLN02770	248	PLN02770, PLN02770, haloacid dehalogenase-like hyd	1e-166
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	2e-44
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	9e-31
TIGR02009	185	TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f	4e-26
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	1e-23
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	7e-20
PRK10725	188	PRK10725, PRK10725, fructose-1-P/6-phosphogluconat	5e-19
PRK13222	226	PRK13222, PRK13222, phosphoglycolate phosphatase;	5e-19
TIGR01449	213	TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas	1e-18
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	1e-18
PRK13288	214	PRK13288, PRK13288, pyrophosphatase PpaX; Provisio	9e-18
PLN02919	1057	PLN02919, PLN02919, haloacid dehalogenase-like hyd	3e-17
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	3e-17
PRK10563	221	PRK10563, PRK10563, 6-phosphogluconate phosphatase	3e-16
PLN02940	382	PLN02940, PLN02940, riboflavin kinase	3e-16
TIGR01990	185	TIGR01990, bPGM, beta-phosphoglucomutase	5e-16
TIGR01549	162	TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup	5e-14
TIGR01454	205	TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic	2e-13
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	7e-11
PLN02779	286	PLN02779, PLN02779, haloacid dehalogenase-like hyd	8e-11
PRK13223	272	PRK13223, PRK13223, phosphoglycolate phosphatase;	8e-11
TIGR02254	224	TIGR02254, YjjG/YfnB, HAD superfamily (subfamily I	9e-10
TIGR03351	220	TIGR03351, PhnX-like, phosphonatase-like hydrolase	5e-09
PRK13226	229	PRK13226, PRK13226, phosphoglycolate phosphatase;	5e-09
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	8e-08
PLN02811	220	PLN02811, PLN02811, hydrolase	8e-08
PRK10826	222	PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase;	1e-07
pfam13242	74	pfam13242, Hydrolase_like, HAD-hyrolase-like	3e-07
TIGR01422	253	TIGR01422, phosphonatase, phosphonoacetaldehyde hy	8e-07
PRK11587	218	PRK11587, PRK11587, putative phosphatase; Provisio	2e-06
PRK13478	267	PRK13478, PRK13478, phosphonoacetaldehyde hydrolas	2e-06
TIGR01993	183	TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti	1e-05
TIGR01428	198	TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalo	3e-05
PLN02575	381	PLN02575, PLN02575, haloacid dehalogenase-like hyd	3e-05
PLN03243	260	PLN03243, PLN03243, haloacid dehalogenase-like hyd	4e-05
TIGR01548	197	TIGR01548, HAD-SF-IA-hyp1, haloacid dehalogenase s	0.002
TIGR02252	203	TIGR02252, DREG-2, REG-2-like, HAD superfamily (su	0.004

>gnl|CDD|215413 PLN02770, PLN02770, haloacid dehalogenase-like hydrolase family protein

 Score =  459 bits (1182), Expect = e-166
 Identities = 206/246 (83%), Positives = 224/246 (91%)

Query: 1   MTCSTGENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPIT 60
           MT S+GENSVESK +L+ LAPLEAVLFDVDGTLCDSDPLH+YAFREMLQEI FN GVPIT
Sbjct: 1   MTVSSGENSVESKSSLSGLAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPIT 60

Query: 61  EDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWI 120
           E+FFVENIAGKHN DIA  LFPDDL RGLKF +DKEA+FRKLASEQLKP++GL K+KKWI
Sbjct: 61  EEFFVENIAGKHNEDIALGLFPDDLERGLKFTDDKEALFRKLASEQLKPLNGLYKLKKWI 120

Query: 121 EDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS 180
           EDRGLKRAAVTNAPRENAELMIS LGLSDFFQ VI+G ECE AKP PDPY KALE+LKVS
Sbjct: 121 EDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVS 180

Query: 181 KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL 240
           KDHTFVFEDSVSGIKAGVAAG+PVVGLTTRNPE +L+EA PTFLIKDY+DPKLW+ALEEL
Sbjct: 181 KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPKLWAALEEL 240

Query: 241 DKNKDA 246
           D+   A
Sbjct: 241 DQKGAA 246

Length = 248

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score =  148 bits (375), Expect = 2e-44
 Identities = 75/222 (33%), Positives = 115/222 (51%), Gaps = 9/222 (4%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKH--NIDIAK 78
            ++AV+FD+DGTL DS+PLH  A+ E L+E G    + I+++   E   G     ID+ +
Sbjct: 1   MIKAVIFDMDGTLVDSEPLHARAWLEALKEYG----IEISDEEIRELHGGGIARIIDLLR 56

Query: 79  ILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENA 138
            L   + P  L   E        L  E LKPI G+ ++ + ++ RG+  A  +++PR  A
Sbjct: 57  KLAAGEDPADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAA 116

Query: 139 ELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGV 198
           E ++++LGL D+F V++  D+  R KP PD Y  A E L V  +   V EDS +GI+A  
Sbjct: 117 ERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAK 176

Query: 199 AAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL 240
           AAG+ VVG+   +    L   +         D    + L  L
Sbjct: 177 AAGMRVVGVPAGHDRPHLDPLDAHGADTVLLD---LAELPAL 215

Length = 221

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score =  113 bits (284), Expect = 9e-31
 Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 6/210 (2%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD 83
           A+LFD+DGTL DS      AF   L E+G     P+ E+   + I    +  I ++L   
Sbjct: 6   AILFDLDGTLVDSAEDILRAFNAALAELGLP---PLDEEEIRQLIGLGLDELIERLLGEA 62

Query: 84  DLPRGLKFCEDKEAMFRK--LASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELM 141
           D     +  E     F        + +   G+ ++   ++  G K   VTN P    +++
Sbjct: 63  DEEAAAELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDIL 122

Query: 142 ISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAG 201
           +  LGL+D+F V++ GD+    KP P+P    LE L +  +   +  DS++ I A  AAG
Sbjct: 123 LKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAG 182

Query: 202 LPVVGLTTR-NPEHVLLEANPTFLIKDYDD 230
           +P VG+T   N    L +A    +I    +
Sbjct: 183 VPAVGVTWGYNSREELAQAGADVVIDSLAE 212

Length = 220

>gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase

 Score =  100 bits (250), Expect = 4e-26
 Identities = 50/193 (25%), Positives = 96/193 (49%), Gaps = 17/193 (8%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL- 80
            +AV+FD+DG + D+ PLH  A++ +  + G        + +  E++ G    DI + + 
Sbjct: 1   YKAVIFDMDGVITDTAPLHAQAWKHIAAKYGI----SFDKQY-NESLKGLSREDILRAIL 55

Query: 81  ------FPDDLPRGLKFCEDKEAMFRKLASEQL-KPISGLDKVKKWIEDRGLKRAAVTNA 133
                    +    L   E K  ++R+L        + G+  + K ++ +G+     ++ 
Sbjct: 56  KLRGDGLSLEEIHQLA--ERKNELYRELLRLTGVAVLPGIRNLLKRLKAKGIAVGLGSS- 112

Query: 134 PRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSG 193
             +NA  +++KLGL D+F  ++   E +  KP P+ +  A E+L V  +   VFED+++G
Sbjct: 113 -SKNAPRILAKLGLRDYFDAIVDASEVKNGKPHPETFLLAAELLGVPPNECIVFEDALAG 171

Query: 194 IKAGVAAGLPVVG 206
           ++A  AAG+  V 
Sbjct: 172 VQAARAAGMFAVA 184

This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 93.2 bits (232), Expect = 1e-23
 Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 9/184 (4%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDD 84
           ++FD+DGTL D DP+   A R++  E     G+ I+ +  +    G    +    L  + 
Sbjct: 1   IIFDLDGTLIDFDPVIFEALRDLAAER---LGLDISAEE-LREAGGLPFDEALADLLREH 56

Query: 85  LPRGLKFCEDKEAMFRKLASEQ-LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMIS 143
                   ++      +   E  L+P   + ++ + ++ +G+K   ++N  RE  E ++ 
Sbjct: 57  PID----PDEILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLE 112

Query: 144 KLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLP 203
           KLGL D F  V   D+    KP P+ Y + LE L +  +     +DS   ++A  AAG+ 
Sbjct: 113 KLGLLDLFDAVFTSDDVGARKPDPEAYERVLERLGLPPEEILFIDDSPEDLEAARAAGIK 172

Query: 204 VVGL 207
            V +
Sbjct: 173 TVHV 176

Length = 176

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score = 84.6 bits (209), Expect = 7e-20
 Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 9/216 (4%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFND------GVPITEDFFVENIAGKHNIDIA 77
           A+LFD+DGTL D D     A      EIG  +       + + E      + G++  +  
Sbjct: 6   AILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYG 65

Query: 78  KILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRG--LKRAAVTNAPR 135
             L            ++   +  +L +   K +    +  + +++ G   K   +TN  R
Sbjct: 66  LTLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKKYKLGILTNGAR 125

Query: 136 ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGI 194
            + E  + +LGL D+F  V + ++   AKP P+ +  ALE L V  +      DS+ + I
Sbjct: 126 PHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDSLENDI 185

Query: 195 KAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD 230
               A G+  V +             P + I    +
Sbjct: 186 LGARALGMKTVWINRGGKPLPDALEAPDYEISSLAE 221

Length = 229

>gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional

 Score = 81.3 bits (201), Expect = 5e-19
 Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 25/193 (12%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFN---------DGVPITEDFFVENIAGKHN 73
             ++FD+DGT+ D++P H  A+RE+L   G           +G P       + I   + 
Sbjct: 6   AGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWR--IAQAIIELNQ 63

Query: 74  IDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAV-TN 132
            D    L P  L R      +K    + +  + ++P+  ++ VK W    G +  AV T 
Sbjct: 64  AD----LDPHALAR------EKTEAVKSMLLDSVEPLPLIEVVKAW---HGRRPMAVGTG 110

Query: 133 APRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVS 192
           +    AE +++ LGL  +F  V+  D+ +  KP PD + +  +++ V      VFED+  
Sbjct: 111 SESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADF 170

Query: 193 GIKAGVAAGLPVV 205
           GI+A  AAG+  V
Sbjct: 171 GIQAARAAGMDAV 183

Length = 188

>gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional

 Score = 82.2 bits (204), Expect = 5e-19
 Identities = 59/230 (25%), Positives = 86/230 (37%), Gaps = 30/230 (13%)

Query: 17  AKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGF------------NDGVPITEDFF 64
            K   + AV FD+DGTL DS P    A    L  +G              +G  +     
Sbjct: 1   MKFMDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADV----L 56

Query: 65  VENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKP--ISGLDKVKKWIED 122
           VE        +  + L         +     E +       +L P     L      ++ 
Sbjct: 57  VERALTWAGREPDEELLEKLRELFDRHYA--ENVAGG---SRLYPGVKETLA----ALKA 107

Query: 123 RGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKD 182
            G   A VTN P      ++  LG++D+F VVI GD     KP P P   A E L +  +
Sbjct: 108 AGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPE 167

Query: 183 HTFVFEDSVSGIKAGVAAGLPVVGLT--TRNPEHVLLEANPTFLIKDYDD 230
                 DS + I+A  AAG P VG+T      E +   + P  +I  + +
Sbjct: 168 EMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPI-ALSEPDVVIDHFAE 216

Length = 226

>gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic

 Score = 81.4 bits (201), Expect = 1e-18
 Identities = 58/201 (28%), Positives = 85/201 (42%), Gaps = 7/201 (3%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDD 84
           VLFD+DGTL DS P    A    L  +G     P T    +  I     + + ++L    
Sbjct: 1   VLFDLDGTLVDSAPDIAAAVNMALAALG---LPPATLARVIGFIGNGVPVLMERVLAWAG 57

Query: 85  LPRGLKFCEDKEAMFRK----LASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAEL 140
                +   +   +F +    +A E      G++     +  +GL+   VTN P   A  
Sbjct: 58  QEPDAQRVAELRKLFDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARP 117

Query: 141 MISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAA 200
           ++  LGL+ +F V+I GD   + KP PDP   A E L V+        DS   I+A  AA
Sbjct: 118 LLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAA 177

Query: 201 GLPVVGLTTRNPEHVLLEANP 221
           G P V LT        ++  P
Sbjct: 178 GCPSVLLTYGYRYGEAIDLLP 198

PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 80.0 bits (197), Expect = 1e-18
 Identities = 43/188 (22%), Positives = 68/188 (36%), Gaps = 9/188 (4%)

Query: 22  LEAVLFDVDGTLCDSDPLHH--YAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKI 79
           ++AV+FD+DGTL D +P+     A  E    +G    V    +   +    +    +   
Sbjct: 1   IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGV-AIVIAAGENLTKEGREELVRRLLLR 59

Query: 80  LFPDDLPRGLKFCEDKEAMFRK------LASEQLKPISGLDKVKKWIEDRGLKRAAVTNA 133
               +             +         L +       G  +  K +++ G+K A +T  
Sbjct: 60  ALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGD 119

Query: 134 PRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSG 193
            R  A  +   LGL D      L       KP P  +  ALE L V  +   +  D V+ 
Sbjct: 120 NRLTANAIARLLGLFDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVND 179

Query: 194 IKAGVAAG 201
           I A  AAG
Sbjct: 180 IPAAKAAG 187

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional

 Score = 78.5 bits (194), Expect = 9e-18
 Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 38/223 (17%)

Query: 24  AVLFDVDGTLCDSDPL----------HHYAFREMLQEIGFNDGVPITEDFFVENIAGKHN 73
            VLFD+DGTL +++ L           +Y  +   +++    G  + + F          
Sbjct: 5   TVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTF--------SK 56

Query: 74  IDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQ----LKPISGLDKVKKWIEDRGLKRAA 129
           ID +K              E+    +R+   E     +     + +  K ++ +G K   
Sbjct: 57  IDESK-------------VEEMITTYREFNHEHHDELVTEYETVYETLKTLKKQGYKLGI 103

Query: 130 VTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFED 189
           VT   R+  E+ +   GL +FF VVI  D+ E AKP P+P  KALE+L    +   +  D
Sbjct: 104 VTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGD 163

Query: 190 SVSGIKAGVAAGLP--VVGLTTRNPEHVLLEANPTFLIKDYDD 230
           +   I AG  AG     V  T +  E+ L +  P F++    D
Sbjct: 164 NHHDILAGKNAGTKTAGVAWTIKGREY-LEQYKPDFMLDKMSD 205

Length = 214

>gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein

 Score = 80.3 bits (198), Expect = 3e-17
 Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 27/235 (11%)

Query: 7   ENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYA----FREMLQEIGFNDGVPIT-- 60
           E S  ++ A  +   + AVLFD+DG LC+S+     A    F EM  E+   D VP    
Sbjct: 60  EKSRGAEIATEEWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGT 119

Query: 61  -EDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISG------L 113
            E  F+  +A    +            +G      K+  F     +  KP SG      L
Sbjct: 120 GEANFLGGVASVKGV------------KGFDPDAAKKRFFEIYLEKYAKPNSGIGFPGAL 167

Query: 114 DKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS-DFFQVVILGDECERAKPFPDPYFK 172
           + + +  +++GLK A  ++A R   +  ++  GL    F  ++  D  E  KP PD +  
Sbjct: 168 ELITQ-CKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLA 226

Query: 173 ALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD 227
           A ++L V      V ED+++G++A  AAG+  + +TT   E +L +A P+ + KD
Sbjct: 227 AAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281

Length = 1057

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 76.3 bits (188), Expect = 3e-17
 Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 9/185 (4%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVE-NIAGKHNIDIAKILFP 82
           AVLFD+DG L D+            + +   +   + ++  V    + +  +   K  + 
Sbjct: 1   AVLFDLDGVLVDTAHAIA-------KLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYG 53

Query: 83  DDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI 142
             +         K+  +  L  E LKP+ G+  + + +  RG K A +TN+PR     ++
Sbjct: 54  RTMSAEDAQLLYKQLFYEALEKEGLKPLPGVRALLEALRARGKKLALLTNSPR-ADAKLV 112

Query: 143 SKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGL 202
            +LGL   F VVI   +    KP PD Y +AL+ L +        +DS +GI A  AAG+
Sbjct: 113 LELGLRALFDVVIDSSDVGLGKPDPDIYLQALKKLGLKPSECLFVDDSPAGIDAAKAAGM 172

Query: 203 PVVGL 207
             V +
Sbjct: 173 HTVLV 177

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional

 Score = 74.7 bits (184), Expect = 3e-16
 Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 34/198 (17%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDF----------FVENIAGK 71
           +EAV FD DGTL DS+ +   A+  M  E G    + + E F           ++ I+ +
Sbjct: 4   IEAVFFDCDGTLVDSEVICSRAYVTMFAEFGIT--LSLEEVFKRFKGVKLYEIIDIISKE 61

Query: 72  HNIDIAKILFPDDLPRGLKFCEDKEAMFR----KLASEQLKPISGLDKVKKWIEDRGLKR 127
           H + +AK               + E ++R    +L   +L+PI+G       +E   +  
Sbjct: 62  HGVTLAK--------------AELEPVYRAEVARLFDSELEPIAG---ANALLESITVPM 104

Query: 128 AAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV 186
             V+N P    +  + K G+  +F   +  G + +R KP P   F A E + V+ ++  +
Sbjct: 105 CVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCIL 164

Query: 187 FEDSVSGIKAGVAAGLPV 204
            +DS +G ++G+AAG+ V
Sbjct: 165 VDDSSAGAQSGIAAGMEV 182

Length = 221

>gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase

 Score = 76.4 bits (188), Expect = 3e-16
 Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 17/198 (8%)

Query: 14  DALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFN-DGVPITEDFFVENIAGKH 72
             L KL  +  V+ D+DGTL ++D +     +  L + G   DG         + I GK 
Sbjct: 5   KPLKKL--VSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGRE------AQKIVGKT 56

Query: 73  NIDIAKILFPD-DLPRGLKFCEDKEAMFRKLASEQ---LKPISGLDKVKKWIEDRGLKRA 128
            ++ A  +  D  LP      ++  +    L SEQ   +K + G +++ K ++  G+  A
Sbjct: 57  PLEAAATVVEDYGLPCST---DEFNSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPMA 113

Query: 129 AVTNAPRENAELMIS-KLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF 187
             +N+PR N E  IS   G  + F V++ GDE E+ KP PD + +A + L V   +  V 
Sbjct: 114 LASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVI 173

Query: 188 EDSVSGIKAGVAAGLPVV 205
           EDS+ G+ AG AAG+ V+
Sbjct: 174 EDSLPGVMAGKAAGMEVI 191

Length = 382

>gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase

 Score = 73.1 bits (180), Expect = 5e-16
 Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 22/195 (11%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD 83
           AV+FD+DG + D+   H+ A++ +  E+G    +P  E+F  E++ G    +  + +   
Sbjct: 1   AVIFDLDGVITDTAEYHYLAWKHLADELG----IPFDEEF-NESLKGVSREESLERILDL 55

Query: 84  DLPRGLKFCED-KEAM-------FRKLASEQLKPISGLDKVKKWIED---RGLKRAAVTN 132
               G K+ E+ KE +       + +L  E L P   L  +K  + D     +K  A+ +
Sbjct: 56  G---GKKYSEEEKEELAERKNDYYVELLKE-LTPADVLPGIKSLLADLKKNNIK-IALAS 110

Query: 133 APRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVS 192
           A + NA  ++ KL L D+F  ++   E ++ KP P+ +  A E L VS       ED+ +
Sbjct: 111 ASK-NAPTILEKLELIDYFDAIVDPAELKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQA 169

Query: 193 GIKAGVAAGLPVVGL 207
           GI+A  AAG+  VG+
Sbjct: 170 GIEAIKAAGMFAVGV 184

This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185

>gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

 Score = 67.4 bits (165), Expect = 5e-14
 Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 20/180 (11%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD 83
           A+LFD+DGTL D       AF +  +E G N        F           ++   +  +
Sbjct: 1   AILFDIDGTLVDIKFAIRRAFAQTFEEFGLN-----PAAFKRLKALRGLAEELLWRIATE 55

Query: 84  DLP--RGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELM 141
            L   +G    + +EA              G   +   +++ G+K   ++N      +L+
Sbjct: 56  ALEELQGHIGYDAEEAYIP-----------GAADLLPRLKEAGIKLGIISNGSLRAQKLL 104

Query: 142 ISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAG 201
           + K GL D+F++++  DE   +KP P+ +  ALE L V         D++S IK    AG
Sbjct: 105 LRKHGLGDYFELILGSDEI-GSKPEPEIFLAALESLGVP-PEVLHVGDNLSDIKGARNAG 162

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162

>gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein

 Score = 66.4 bits (162), Expect = 2e-13
 Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 16/206 (7%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDD 84
           V+FD+DG L DS  +   AF    +E+   DG    E++      G++  DI +I+    
Sbjct: 1   VVFDLDGVLVDSFAVMREAFAIAYREV-VGDGPAPFEEY--RRHLGRYFPDIMRIM---G 54

Query: 85  LPRGLKFCEDKEAMFR---KLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELM 141
           LP      E +E   R   +LA E ++   G+ ++   +   G+  A  T      A  +
Sbjct: 55  LP-----LEMEEPFVRESYRLAGE-VEVFPGVPELLAELRADGVGTAIATGKSGPRARSL 108

Query: 142 ISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAG 201
           +  LGL   F  VI  DE  R KP PD   +AL +L V  +   +  D+V+ + +  AAG
Sbjct: 109 LEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAG 168

Query: 202 LPVVGLTTRNPEHV-LLEANPTFLIK 226
              V       +   LL A P FL++
Sbjct: 169 TATVAALWGEGDAGELLAARPDFLLR 194

The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 59.7 bits (145), Expect = 7e-11
 Identities = 41/193 (21%), Positives = 69/193 (35%), Gaps = 15/193 (7%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREML-------QEIGFNDGVPITEDFFVE---NIAGKHN 73
           A+ FD+D TL D+  L   A R  +         + F +          E   N     +
Sbjct: 4   AIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFD 63

Query: 74  IDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNA 133
             I ++          K        + KL    L+   G+      + + G +   +T+ 
Sbjct: 64  YLIRRL----WEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDG 119

Query: 134 PRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-S 192
                   + +LG+ DFF  VI  +E    KP P  ++ AL+ L V  +   +  D +  
Sbjct: 120 LPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDK 179

Query: 193 GIKAGVAAGLPVV 205
            IK     G+  V
Sbjct: 180 DIKGAKNLGMKTV 192

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein

 Score = 60.5 bits (147), Expect = 8e-11
 Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 22/212 (10%)

Query: 15  ALAKLAPLEAVLFDVDGTLCDSDP-LHHYAFREMLQEIGFNDGVPITEDFFVE--NIAG- 70
           + +  A  EA+LFD DG L +++   H  AF +  +E G    V    + + E  NI G 
Sbjct: 33  SASASALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRP-VEWDVELYDELLNIGGG 91

Query: 71  --KHNIDIAKILFPDDLPRGLKFCEDKEAMF------RK-------LASEQLKPISGLDK 115
             +      +  +P          E++          RK       + S  L    G+ +
Sbjct: 92  KERMTWYFNENGWPTSTIEKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLR 151

Query: 116 VKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQV--VILGDECERAKPFPDPYFKA 173
           +       G+K A  + +  +    +++ L   +  Q   V  GD+  + KP PD Y  A
Sbjct: 152 LMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLA 211

Query: 174 LEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVV 205
            E L V      V EDSV G++A  AAG+  +
Sbjct: 212 AETLGVDPSRCVVVEDSVIGLQAAKAAGMRCI 243

Length = 286

>gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional

 Score = 60.3 bits (146), Expect = 8e-11
 Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 29/219 (13%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIG------------FNDGVPITEDFFVENIAGKH 72
           V+FD+DGTL DS P    A   ML E+G              +G P+        +AG  
Sbjct: 16  VMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPV---LVRRALAG-- 70

Query: 73  NIDIAKILFPDDL--PRGLKFCEDKEAMFRKLASEQLKPI-SGLDKVKKWIEDRGLKRAA 129
           +ID   +   DD    + L    +  A      S +L  +  G+    KW++ +G++ A 
Sbjct: 71  SIDHDGV---DDELAEQALALFMEAYA-----DSHELTVVYPGVRDTLKWLKKQGVEMAL 122

Query: 130 VTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFED 189
           +TN P      ++ ++ +  +F+ +I GD   + KP P      ++M  V    +    D
Sbjct: 123 ITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGD 182

Query: 190 SVSGIKAGVAAGLPVVGLT-TRNPEHVLLEANPTFLIKD 227
           S S + A  AAG+  V L+   N    + E +P  +I D
Sbjct: 183 SRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDD 221

Length = 272

>gnl|CDD|162788 TIGR02254, YjjG/YfnB, HAD superfamily (subfamily IA) hydrolase, TIGR02254

 Score = 56.7 bits (137), Expect = 9e-10
 Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 23/198 (11%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIGFND-GVPITEDFF-----------VENIAGKH 72
           +LFD+D T+     L   A   +   + F D G+P+TED F                GK 
Sbjct: 4   LLFDLDDTI-----LDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKI 58

Query: 73  NIDIAKILFPDDLPRGLKFCEDKEAM---FRKLASEQLKPISGLDKVKKWIEDRGLKRAA 129
             D         L +      D+  +   + +   E  + + G  ++ + ++ +  +   
Sbjct: 59  TKDEVVNTRFSALLKEYNTEADEALLNQKYLRFLEEGHQLLPGAFELMENLQ-QKFRLYI 117

Query: 130 VTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALE-MLKVSKDHTFVFE 188
           VTN  RE     + K GL  FF  + + ++    KP  + +  ALE M K SK+   +  
Sbjct: 118 VTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIG 177

Query: 189 DSV-SGIKAGVAAGLPVV 205
           DS+ + IK G  AGL   
Sbjct: 178 DSLTADIKGGQNAGLDTC 195

This family consists of uncharacterized proteobacterial and gram positive bacterial sequences including YjjG from E. coli and YfnB from B. subtilis. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. Length = 224

>gnl|CDD|234176 TIGR03351, PhnX-like, phosphonatase-like hydrolase

 Score = 54.4 bits (131), Expect = 5e-09
 Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 13/213 (6%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           +  V+ D+ GT  D D L + A R+ +   G    +  T +       G+  I+  + L 
Sbjct: 1   ISLVVLDMAGTTVDEDGLVYRALRQAVTAAG----LSPTPEEVQSAWMGQSKIEAIRALL 56

Query: 82  P--DDLPRGLK--FCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
                     +  F + +E +           + G ++  + +   G+K A  T   R+ 
Sbjct: 57  AADGADEAEAQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDT 116

Query: 138 AELMISKLGLS--DFFQVVILGDECERAKPFPDPYFKALEMLKV-SKDHTFVFEDSVSGI 194
           AE ++ KLG +  D    V+   +    +P PD   +A+E+  V       V  D+ + +
Sbjct: 117 AERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDL 176

Query: 195 KAGVAAG-LPVVG-LTTRNPEHVLLEANPTFLI 225
           +AG+ AG   VVG LT  +    L     T ++
Sbjct: 177 EAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL 209

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the substrate is also, like Pald, a 2-oxo-ethylphosphonate. Despite this, the genomic context of members of this family are quite distinct from PhnX, which is almost invariably associated with the 2-aminoethylphosphonate transaminase PhnW (TIGR02326), the source of the substrate Pald. Members of this clade are never associated with PhnW, but rather associate with families of FAD-dependent oxidoreductases related to deaminating amino acid oxidases (pfam01266) as well as zinc-dependent dehydrogenases (pfam00107). Notably, family members from Arthrobacter aurescens TC1 and Nocardia farcinica IFM 10152 are adjacent to the PhnCDE ABC cassette phosphonates transporter (GenProp0236) typically found in association with the phosphonates C-P lyase system (GenProp0232). These observations suggest two possibilities. First, the substrate for this enzyme family is also Pald, the non-association with PhnW not withstanding. Alternatively, the substrate is something very closely related such as hydroxyphosphonoacetaldehyde (Hpald). Hpald could come from oxidative deamination of 1-hydroxy-2-aminoethylphosphonate (HAEP) by the associated oxidase. HAEP would not be a substrate for PhnW due to its high specificity for AEP. HAEP has been shown to be a constituent of the sphingophosphonolipid of Bacteriovorax stolpii, and presumably has other natural sources. If Hpald is the substrate, the product would be glycoaldehyde (hydroxyacetaldehyde), and the associated alcohol dehydrogenase may serve to convert this to glycol. Length = 220

>gnl|CDD|237311 PRK13226, PRK13226, phosphoglycolate phosphatase; Provisional

 Score = 54.5 bits (131), Expect = 5e-09
 Identities = 57/187 (30%), Positives = 78/187 (41%), Gaps = 13/187 (6%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD 83
           AVLFD+DGTL DS P        ML   G     PIT    +  +  K    +  + FP+
Sbjct: 14  AVLFDLDGTLLDSAPDMLATVNAMLAARGR---APITLAQ-LRPVVSKGARAMLAVAFPE 69

Query: 84  ---DLPRGL--KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENA 138
                   L  +F +  EA    L   Q +   G++ + + +E  G     VTN P   A
Sbjct: 70  LDAAARDALIPEFLQRYEA----LIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLA 125

Query: 139 ELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGV 198
            L++ +LG      V+I GD     KP P P   A E + V+        D    I A  
Sbjct: 126 RLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAAR 185

Query: 199 AAGLPVV 205
           AAG+P V
Sbjct: 186 AAGMPSV 192

Length = 229

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 49.7 bits (119), Expect = 8e-08
 Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 16/105 (15%)

Query: 118 KWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVI----------------LGDECE 161
           K ++++G+K A  TN  R     ++ +LGL D+F  VI                 G   +
Sbjct: 34  KELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFD 93

Query: 162 RAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVG 206
             KP PD    AL++L V  +   +  DS++ I+   AAG   V 
Sbjct: 94  IGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|178407 PLN02811, PLN02811, hydrolase

 Score = 50.9 bits (122), Expect = 8e-08
 Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 13/147 (8%)

Query: 70  GKHNIDIAKILFPD-DLPRGL---KFCEDKEAMFRKL-ASEQLKPISGLDKVKKWIEDRG 124
           GK  I+ A+I   +  L   L    F  ++EAM + L  +  L P  G +++ + +  +G
Sbjct: 37  GKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTSDLMP--GAERLVRHLHAKG 94

Query: 125 LKRAAVTNAPRENAELMISKLG-LSDFFQVVILGDECE--RAKPFPDPYFKA---LEMLK 178
           +  A  T + + + +L   + G L      V+ GD+ E  + KP PD +  A    E   
Sbjct: 95  IPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGP 154

Query: 179 VSKDHTFVFEDSVSGIKAGVAAGLPVV 205
           V      VFED+ SG++A   AG+ VV
Sbjct: 155 VDPGKVLVFEDAPSGVEAAKNAGMSVV 181

Length = 220

>gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 7/183 (3%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAG---KHNIDIA 77
            + A +FD+DG L DS+PL   A  +++  +G    V I+    + +  G      +D+ 
Sbjct: 6   QILAAIFDMDGLLIDSEPLWDRAELDVMASLG----VDISRREELPDTLGLRIDQVVDLW 61

Query: 78  KILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
               P + P   +  +   A    L  E    + G+ +     + +GLK    + +P   
Sbjct: 62  YARQPWNGPSRQEVVQRIIARVISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHM 121

Query: 138 AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAG 197
            E +++   L D+F  +   ++   +KP P+ Y      L V        EDS +G+ A 
Sbjct: 122 LEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAA 181

Query: 198 VAA 200
            AA
Sbjct: 182 KAA 184

Length = 222

>gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 162 RAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEA-- 219
             KP P     ALE L V  +   +  DS + I A  AAG+  + + T       LE   
Sbjct: 2   CGKPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAEDLERAP 61

Query: 220 -NPTFLIKDYDD 230
             P +++    D
Sbjct: 62  GRPDYVVDSLAD 73

Length = 74

>gnl|CDD|188140 TIGR01422, phosphonatase, phosphonoacetaldehyde hydrolase

 Score = 48.5 bits (116), Expect = 8e-07
 Identities = 50/212 (23%), Positives = 78/212 (36%), Gaps = 33/212 (15%)

Query: 21  PLEAVLFDVDGTLCD---SDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNID-I 76
            +EAV+FD  GT  D     P    AF     E     GV IT +   + + G    D I
Sbjct: 1   RIEAVIFDWAGTTVDFGSFAPTG--AF----VEAFAEFGVQITLEEARKPM-GLGKWDHI 53

Query: 77  AKILFPDDLP----------RGLKFCEDKEAMFRKL-------ASEQLKPISGLDKVKKW 119
             +L    +P            L    D +A++           +E   PI G  +V  +
Sbjct: 54  RALL---KMPAVAERWQAKFGRLPTEADVQALYEAFEPMQLAKLAEYASPIPGAIEVIAY 110

Query: 120 IEDRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFKALEMLK 178
           +  RG+K  + T   RE  +++  +     +     +  D+    +P P    K    L 
Sbjct: 111 LRARGIKIGSTTGYTREMMDVVAPEAAAQGYRPDYNVTADDVPAGRPAPWMALKNATELG 170

Query: 179 VSKDHTFV-FEDSVSGIKAGVAAGLPVVGLTT 209
           V      V   D+V  I+ G  AG+  VG+  
Sbjct: 171 VYDPAAVVKVGDTVPDIEEGRNAGMWTVGVIL 202

This enzyme catalyzes the cleavage of the carbon phosphorous bond of a phosphonate. The mechanism depends on the substrate having a carbonyl one carbon away from the cleavage position. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent [Central intermediary metabolism, Other]. Length = 253

>gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 23/188 (12%)

Query: 26  LFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDL 85
           LFD+DGTL DS P    A+        + D   I  D  +  I GK  I   +       
Sbjct: 7   LFDLDGTLVDSLPAVERAW------SNWADRHGIAPDEVLNFIHGKQAITSLRHFMAG-- 58

Query: 86  PRGLKFCEDKEAMFR---KLASEQLKPISGLDKVKKWIE---DRGLKRAAVTNA--PREN 137
                   + +A F    ++ +   + I+ L      +      G+  A VT+   P  +
Sbjct: 59  ----ASEAEIQAEFTRLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVAS 114

Query: 138 AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAG 197
           A    + L   + F   +  +  +R KP PD Y    ++L ++     V ED+ +G+ +G
Sbjct: 115 ARHKAAGLPAPEVF---VTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSG 171

Query: 198 VAAGLPVV 205
           +AAG  V+
Sbjct: 172 LAAGCHVI 179

Length = 218

>gnl|CDD|184075 PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional

 Score = 47.5 bits (114), Expect = 2e-06
 Identities = 56/216 (25%), Positives = 87/216 (40%), Gaps = 43/216 (19%)

Query: 21  PLEAVLFDVDGTLCDS---DPLHHYAFREMLQEIGFNDGVPITEDFFVENIA--GKHNID 75
            ++AV+FD  GT  D     P    AF E   + G    V IT +   E     G    D
Sbjct: 3   KIQAVIFDWAGTTVDFGSFAPTQ--AFVEAFAQFG----VEITLE---EARGPMGLGKWD 53

Query: 76  -IAKILFPDDLPR---------GLKFCE-DKEAMFRKLASEQL-------KPISGLDKVK 117
            I  +L    +PR         G    E D +A++      Q+        PI G+ +V 
Sbjct: 54  HIRALL---KMPRVAARWQAVFGRLPTEADVDALYAAFEPLQIAKLADYATPIPGVLEVI 110

Query: 118 KWIEDRGLKRAAVTNAPRENAELMI---SKLGLS-DFFQVVILGDECERAKPFPDPYFKA 173
             +  RG+K  + T   RE  ++++   +  G   D    V+  D+    +P+P    K 
Sbjct: 111 AALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDH---VVTTDDVPAGRPYPWMALKN 167

Query: 174 LEMLKVSKDHTFV-FEDSVSGIKAGVAAGLPVVGLT 208
              L V      V  +D+V GI+ G+ AG+  VG+ 
Sbjct: 168 AIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVI 203

Length = 267

>gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 113 LDKVKKWIEDRGL------KRAAVTNAPRENAELMISKLGLSDFFQVVILGDECE---RA 163
            DK+K   E R L      ++   TN  R +A   + +LG+ D F  +   D        
Sbjct: 80  YDKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALRRLGIEDCFDGIFCFDTANPDLLP 139

Query: 164 KPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVV 205
           KP P  Y KAL    V  +    F+DS   I AG A G+  V
Sbjct: 140 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAGKALGMKTV 181

This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183

>gnl|CDD|130495 TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalogenase, type II

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 25/176 (14%)

Query: 22  LEAVLFDVDGTLCDSDPL---HHYAFREMLQEI---GFNDGVPITEDFFVENIAG--KHN 73
           ++A++FDV GTL D   +       +    + +            E  ++  + G     
Sbjct: 1   IKALVFDVYGTLFDVHSVVERFAELYGGRGEALSQLWRQK---QLEYSWLRTLMGPYADF 57

Query: 74  IDIAKILFPDDLPR-GLKFCEDKEAMFRKLASE--QLKP----ISGLDKVKKWIEDRGLK 126
            D+ +      L R GL   ED E+   +LA    +L P     +GL  +K+    RG +
Sbjct: 58  WDLTREALRYLLGRLGL---EDDESAADRLAEAYLRLPPHPDVPAGLRALKE----RGYR 110

Query: 127 RAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKD 182
            A ++N      + ++   GL D F  V+  D     KP P  Y  ALE L V  D
Sbjct: 111 LAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPD 166

Catalyzes the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Belongs to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. Length = 198

>gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 23/85 (27%), Positives = 44/85 (51%)

Query: 128 AAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF 187
           A V+  PR+  E  I  +G+  FF V++  ++  R KP P+ +  A ++L    +   VF
Sbjct: 236 ALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVF 295

Query: 188 EDSVSGIKAGVAAGLPVVGLTTRNP 212
            +S   ++A   A +  V + +++P
Sbjct: 296 GNSNQTVEAAHDARMKCVAVASKHP 320

Length = 381

>gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 7/192 (3%)

Query: 24  AVLFDVDGTLCDSD-PLHHYAFREMLQEIGFNDGVPITEDFFVENIAG-KHNIDIAKIL- 80
            V+ + +G + + D  L   A+R + +E    +G      F ++   G K+   I+++L 
Sbjct: 26  GVVLEWEGVIVEDDSELERKAWRALAEE----EGKRPPPAFLLKRAEGMKNEQAISEVLC 81

Query: 81  FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAEL 140
           +  D  +  +    KE ++  +     +   G  +  + ++   +  A  +  PR   E 
Sbjct: 82  WSRDFLQMKRLAIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLER 141

Query: 141 MISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAA 200
            I  +G+  FF VV+  ++  R KP P+ +  A E L    +   VF +S S ++A    
Sbjct: 142 AIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDG 201

Query: 201 GLPVVGLTTRNP 212
            +  V +  ++P
Sbjct: 202 CMKCVAVAGKHP 213

Length = 260

>gnl|CDD|233462 TIGR01548, HAD-SF-IA-hyp1, haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 42/211 (19%), Positives = 69/211 (32%), Gaps = 47/211 (22%)

Query: 23  EAVLFDVDGTLCD---------SDPLHH-YAFREMLQEI-------GFNDGVPITEDFFV 65
           +A++ D+DG + D          D + H         +I         N+   +T    V
Sbjct: 1   QALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLVV 60

Query: 66  ENIAGKHN------------IDIAKILF----PDDLPRGLKFCEDKEAMFRKLASEQLKP 109
           + +    +                + L+           L   ED+           L+ 
Sbjct: 61  DGLNSASSERVRDAPTLEAVTAQFQALYQGVGYYRDLATLGLIEDET---LLTPKGLLRE 117

Query: 110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDP 169
           +    K            A VT  PR++A   ++  GL   F V I  ++C   KP P+P
Sbjct: 118 LHRAPK----------GMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCP-PKPNPEP 166

Query: 170 YFKALEMLKVSKDHTFVFEDSVSGIKAGVAA 200
              A + L V   H  +  D+V  I  G  A
Sbjct: 167 LILAAKALGVEACHAAMVGDTVDDIITGRKA 197

This model represents a small and phylogenetically curious clade of sequences. Sequences are found from Halobacterium (an archaeon), Nostoc and Synechococcus (cyanobacteria) and Phytophthora (a stramenophile eukaryote). These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs. The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. Length = 197

>gnl|CDD|200170 TIGR02252, DREG-2, REG-2-like, HAD superfamily (subfamily IA) hydrolase

 Score = 36.9 bits (86), Expect = 0.004
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 6/96 (6%)

Query: 93  EDKEAMFRKL-----ASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGL 147
           E  E +F +L       E  +      K+ K + +RGL    ++N       L +  LGL
Sbjct: 85  ESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSRLRGL-LEALGL 143

Query: 148 SDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH 183
            ++F  V+   E    KP P  + +ALE   +S + 
Sbjct: 144 LEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEE 179

This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. Length = 203

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	246
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	100.0
PRK13288	214	pyrophosphatase PpaX; Provisional	100.0
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	100.0
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	100.0
PRK13226	229	phosphoglycolate phosphatase; Provisional	100.0
COG0546	220	Gph Predicted phosphatases [General function predi	100.0
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	100.0
PLN02575	381	haloacid dehalogenase-like hydrolase	100.0
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	100.0
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	100.0
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	100.0
PRK11587	218	putative phosphatase; Provisional	100.0
PRK13222	226	phosphoglycolate phosphatase; Provisional	100.0
PRK13223	272	phosphoglycolate phosphatase; Provisional	100.0
PRK13225	273	phosphoglycolate phosphatase; Provisional	100.0
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	100.0
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	100.0
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	100.0
PRK10563	221	6-phosphogluconate phosphatase; Provisional	100.0
PLN02940	382	riboflavin kinase	100.0
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.98
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.98
PRK09449	224	dUMP phosphatase; Provisional	99.97
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.97
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.97
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.97
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.97
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.97
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.97
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.97
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.96
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.96
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.96
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.96
PLN02811	220	hydrolase	99.96
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.95
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.95
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.95
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.94
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.94
PHA02597	197	30.2 hypothetical protein; Provisional	99.94
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.94
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.93
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.93
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.92
PLN02954	224	phosphoserine phosphatase	99.92
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.92
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.92
PRK06769	173	hypothetical protein; Validated	99.91
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.91
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.9
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.9
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.9
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.89
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.88
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.88
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.88
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.88
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.87
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.87
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.85
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.84
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.83
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.82
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.82
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.82
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.82
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.82
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.79
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.79
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.79
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.78
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.77
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.77
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.76
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.75
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.75
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.74
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	99.74
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.74
PRK10444	248	UMP phosphatase; Provisional	99.73
PRK11590	211	hypothetical protein; Provisional	99.73
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.73
PHA02530	300	pseT polynucleotide kinase; Provisional	99.72
PRK01158	230	phosphoglycolate phosphatase; Provisional	99.72
PLN02645	311	phosphoglycolate phosphatase	99.71
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.69
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	99.68
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.67
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	99.66
COG4229	229	Predicted enolase-phosphatase [Energy production a	99.63
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.62
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	99.61
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.6
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	99.59
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	99.59
PRK10513	270	sugar phosphate phosphatase; Provisional	99.58
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.58
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.57
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.57
PRK08238	479	hypothetical protein; Validated	99.56
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	99.56
PRK10976	266	putative hydrolase; Provisional	99.55
PTZ00445	219	p36-lilke protein; Provisional	99.54
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	99.53
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	99.52
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	99.52
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.52
PLN02887	580	hydrolase family protein	99.51
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.49
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	99.46
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	99.44
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	99.44
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	99.43
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	99.42
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	99.41
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	99.4
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	99.38
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.36
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	99.36
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	99.35
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	99.35
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	99.34
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	99.34
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.34
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	99.31
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	99.31
COG4359	220	Uncharacterized conserved protein [Function unknow	99.28
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	99.28
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	99.27
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	99.27
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	99.26
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	99.22
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	99.2
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	99.1
PHA03398	303	viral phosphatase superfamily protein; Provisional	99.09
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	99.08
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	99.04
COG4087	152	Soluble P-type ATPase [General function prediction	99.03
PRK10671	834	copA copper exporting ATPase; Provisional	99.01
COG4996	164	Predicted phosphatase [General function prediction	99.01
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	98.97
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	98.96
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	98.92
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	98.9
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	98.88
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	98.87
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	98.86
PLN02382	413	probable sucrose-phosphatase	98.8
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	98.78
PLN02177	497	glycerol-3-phosphate acyltransferase	98.77
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	98.74
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	98.71
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	98.68
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	98.68
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	98.68
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	98.67
PRK14010	673	potassium-transporting ATPase subunit B; Provision	98.66
PTZ00174	247	phosphomannomutase; Provisional	98.66
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.65
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	98.64
PRK01122	679	potassium-transporting ATPase subunit B; Provision	98.64
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.62
PLN02423	245	phosphomannomutase	98.54
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.54
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	98.51
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	98.49
PRK15122	903	magnesium-transporting ATPase; Provisional	98.48
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	98.48
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	98.48
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	98.47
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	98.44
COG3700	237	AphA Acid phosphatase (class B) [General function	98.43
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	98.42
COG2503	274	Predicted secreted acid phosphatase [General funct	98.42
PLN02645	311	phosphoglycolate phosphatase	98.34
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	98.33
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	98.32
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	98.2
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	98.17
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	98.11
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	98.05
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	98.05
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	98.03
PLN02580	384	trehalose-phosphatase	97.99
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	97.99
COG5663	194	Uncharacterized conserved protein [Function unknow	97.98
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	97.97
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	97.95
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	97.91
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	97.91
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	97.77
COG4030	315	Uncharacterized protein conserved in archaea [Func	97.7
PLN03190	1178	aminophospholipid translocase; Provisional	97.68
PLN02499	498	glycerol-3-phosphate acyltransferase	97.67
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	97.65
PLN02151	354	trehalose-phosphatase	97.52
PLN03017	366	trehalose-phosphatase	97.48
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	97.47
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	97.41
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	97.41
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	97.39
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	97.35
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	97.34
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	97.25
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	97.21
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	96.84
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	96.79
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	96.52
PRK10444	248	UMP phosphatase; Provisional	96.34
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	96.25
KOG0206	1151	consensus P-type ATPase [General function predicti	96.19
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	95.96
KOG3128	298	consensus Uncharacterized conserved protein [Funct	95.76
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	95.71
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	95.66
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	95.66
KOG0209	1160	consensus P-type ATPase [Inorganic ion transport a	94.85
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	94.74
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	94.7
KOG3107	468	consensus Predicted haloacid dehalogenase-like hyd	94.63
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	94.58
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	94.37
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	94.1
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	93.81
PRK10513	270	sugar phosphate phosphatase; Provisional	93.52
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	93.38
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	93.34
PRK01158	230	phosphoglycolate phosphatase; Provisional	93.3
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	93.2
KOG0323	635	consensus TFIIF-interacting CTD phosphatases, incl	93.17
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	93.1
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	92.91
PRK10976	266	putative hydrolase; Provisional	92.76
KOG0203	1019	consensus Na+/K+ ATPase, alpha subunit [Inorganic	92.48
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	92.48
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	92.45
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	92.44
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	92.36
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	92.26
KOG4549	144	consensus Magnesium-dependent phosphatase [General	92.0
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	91.89
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	91.7
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	91.49
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	90.9
KOG0208	1140	consensus Cation transport ATPase [Inorganic ion t	90.34
PF13580	138	SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_	89.94
PF05690	247	ThiG: Thiazole biosynthesis protein ThiG; InterPro	89.29
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	88.04
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	87.93
PF06014	62	DUF910: Bacterial protein of unknown function (DUF	87.4
KOG2116	738	consensus Protein involved in plasmid maintenance/	87.19
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	87.15
COG0731	296	Fe-S oxidoreductases [Energy production and conver	86.3
COG4850	373	Uncharacterized conserved protein [Function unknow	85.95
KOG0205	942	consensus Plasma membrane H+-transporting ATPase [	85.33
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	85.03
KOG3189	252	consensus Phosphomannomutase [Lipid transport and	83.92
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	82.97
cd04728	248	ThiG Thiazole synthase (ThiG) is the tetrameric en	82.36
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	82.23
PLN02887	580	hydrolase family protein	82.14
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	82.08
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	81.88
PTZ00174	247	phosphomannomutase; Provisional	81.42
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	80.56
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	80.38
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	80.17

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=100.00  E-value=4.8e-41  Score=257.57  Aligned_cols=242  Identities=85%  Similarity=1.288  Sum_probs=202.6

Q ss_pred             CccCCCCCcccccccccccCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHh
Q 025896            1 MTCSTGENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL   80 (246)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (246)
                      |+++.+++++.+.++.....++|+|+||+||||+|+...+..++..+++++|...+.+.....+...+.|.+.......+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~   80 (248)
T PLN02770          1 MTVSSGENSVESKSSLSGLAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGL   80 (248)
T ss_pred             CccccCcccccccccccccCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            89999999988888888888999999999999999999999999999999965433445555555566687777777666


Q ss_pred             CCCCchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC
Q 025896           81 FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC  160 (246)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~  160 (246)
                      +.........+.......|.........++||+.++|++|+++|++++|+||.....++..++++|+.++|+.++++++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~  160 (248)
T PLN02770         81 FPDDLERGLKFTDDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSEC  160 (248)
T ss_pred             cCcchhhHHHHHHHHHHHHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcC
Confidence            55421122223334445555544456889999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ...||+|+.|..++++++++|++|++|||+..|+++|+++|+.+|++.+++....+....|+++++++.|+.+...++.+
T Consensus       161 ~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~~~~~~~~~  240 (248)
T PLN02770        161 EHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPKLWAALEEL  240 (248)
T ss_pred             CCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhHHHHHHhhc
Confidence            99999999999999999999999999999999999999999999999988655556567899999999997777777666


Q ss_pred             hc
Q 025896          241 DK  242 (246)
Q Consensus       241 ~~  242 (246)
                      .+
T Consensus       241 ~~  242 (248)
T PLN02770        241 DQ  242 (248)
T ss_pred             cc
Confidence            55

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=100.00  E-value=3.9e-35  Score=220.88  Aligned_cols=210  Identities=25%  Similarity=0.352  Sum_probs=171.2

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFR  100 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (246)
                      ++|+|+||+||||+|+...+..++..++++++..   ..+...+. ...|.+..+.+..+.   ......+...+...+.
T Consensus         2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~---~~~~~~~~-~~~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~   74 (214)
T PRK13288          2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPN---QYKREDVL-PFIGPSLHDTFSKID---ESKVEEMITTYREFNH   74 (214)
T ss_pred             CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCC---CCCHHHHH-HHhCcCHHHHHHhcC---HHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999532   23444443 345777666665542   2233333344444444


Q ss_pred             HHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCC
Q 025896          101 KLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS  180 (246)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  180 (246)
                      ........++||+.++|+.|+++|++++|+||+....++..++.+|+..+|+.++++++....||+|+.+++++++++++
T Consensus        75 ~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~  154 (214)
T PRK13288         75 EHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAK  154 (214)
T ss_pred             HhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence            33334578999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEEecChhhhHHHHhcCCCEEEEcCCC-ChhhhhccCCcEEecCCCChhhHHHHhh
Q 025896          181 KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRN-PEHVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       181 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~-~~~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      |+++++|||+.+|+++|+++|+.++++.++. ...+..+..++++++++.+  +..++..
T Consensus       155 ~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~--l~~~i~~  212 (214)
T PRK13288        155 PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSD--LLAIVGD  212 (214)
T ss_pred             HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHH--HHHHHhh
Confidence            9999999999999999999999999999884 4445555679999999999  5655543

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=100.00  E-value=5.7e-35  Score=224.04  Aligned_cols=210  Identities=20%  Similarity=0.331  Sum_probs=171.9

Q ss_pred             CCcceEEEeCCCccccCh-hhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC--CchhhhhhHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSD-PLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD--DLPRGLKFCEDKE   96 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   96 (246)
                      ..+|+|+|||||||+|+. ..+..+|..+++++|+    ..+.......+.|.+....+..++..  .......+...+.
T Consensus        22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~----~~~~~e~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~~~~~   97 (260)
T PLN03243         22 CGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGK----RPPPAFLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKE   97 (260)
T ss_pred             CCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCC----CCCHHHHHHHhcCCCHHHHHHHHhccCCCHHHHHHHHHHHH
Confidence            469999999999999996 5667899999999954    45555555567788888887777654  2333444444444


Q ss_pred             HHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHH
Q 025896           97 AMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      ..+.........++||+.++|++|+++|++++|+||.....++..++++|+.++|+.++++++....||+|++|..++++
T Consensus        98 ~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~  177 (260)
T PLN03243         98 DLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAER  177 (260)
T ss_pred             HHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHH
Confidence            44433333457899999999999999999999999999999999999999999999999999998899999999999999


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHH
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWS  235 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~  235 (246)
                      ++++|++|++|||+.+|+++|+++|+.++++.........  ..++++++++.++....
T Consensus       178 l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l--~~ad~vi~~~~el~~~~  234 (260)
T PLN03243        178 LGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYEL--SAGDLVVRRLDDLSVVD  234 (260)
T ss_pred             hCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhh--ccCCEEeCCHHHHHHHH
Confidence            9999999999999999999999999999999743333332  36899999999965443

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=100.00  E-value=3.7e-35  Score=222.12  Aligned_cols=212  Identities=19%  Similarity=0.276  Sum_probs=168.6

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC---CchhhhhhHHHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD---DLPRGLKFCEDK   95 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   95 (246)
                      ..++|+|+||+||||+|+...+..++.++++++|.    ............|.........+...   ............
T Consensus         4 ~~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (222)
T PRK10826          4 PRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGV----DISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRI   79 (222)
T ss_pred             cccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCC----CCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence            34589999999999999999999999999999954    34442333344465555444443222   112223333444


Q ss_pred             HHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHH
Q 025896           96 EAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALE  175 (246)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~  175 (246)
                      ...+.........++||+.++|+.|+++|++++|+||.....++..++++++..+|+.+++++..+.+||+|+.++.+++
T Consensus        80 ~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~  159 (222)
T PRK10826         80 IARVISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAA  159 (222)
T ss_pred             HHHHHHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHH
Confidence            44444443446789999999999999999999999999999999999999999999999999998999999999999999


Q ss_pred             HcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhH
Q 025896          176 MLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLW  234 (246)
Q Consensus       176 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~  234 (246)
                      ++|++|++|++|||+.+|+++|+++|++++++.++....+.....++++++++.|+.-.
T Consensus       160 ~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~~  218 (222)
T PRK10826        160 KLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAA  218 (222)
T ss_pred             HcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhhh
Confidence            99999999999999999999999999999999988655444445689999999995433

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=100.00  E-value=6.8e-35  Score=221.23  Aligned_cols=208  Identities=27%  Similarity=0.312  Sum_probs=170.4

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-CchhhhhhHHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-DLPRGLKFCEDKEAM   98 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   98 (246)
                      .++|+|+||+||||+|+...+..++..+++++|.+   ..+.+.. ....|............. .......+...+...
T Consensus        10 ~~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~---~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (229)
T PRK13226         10 RFPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRA---PITLAQL-RPVVSKGARAMLAVAFPELDAAARDALIPEFLQR   85 (229)
T ss_pred             ccCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCC---CCCHHHH-HHHhhhHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence            45799999999999999999999999999999654   2344443 334466655555555443 333344555556666


Q ss_pred             HHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcC
Q 025896           99 FRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLK  178 (246)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~  178 (246)
                      |.........++||+.++|++|+++|++++|+||++.......++++++..+|+.+++++..+..||+|+.|..+++++|
T Consensus        86 ~~~~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~  165 (229)
T PRK13226         86 YEALIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIG  165 (229)
T ss_pred             HHHhhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhC
Confidence            66554456789999999999999999999999999998899999999999999999888888889999999999999999


Q ss_pred             CCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC--hhhhhccCCcEEecCCCCh
Q 025896          179 VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP--EHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       179 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~--~~~~~~~~~~~~i~~~~el  231 (246)
                      ++|++|++|||+.+|+.+|+++|+.++++.++..  ........++++++++.++
T Consensus       166 ~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el  220 (229)
T PRK13226        166 VAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLL  220 (229)
T ss_pred             CChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence            9999999999999999999999999999998853  2333446799999999994

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=100.00  E-value=2.4e-34  Score=216.66  Aligned_cols=212  Identities=29%  Similarity=0.468  Sum_probs=176.2

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-CchhhhhhHHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-DLPRGLKFCEDKEAM   98 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   98 (246)
                      +++++|+||+||||+|+...+..++..+++.+|..   ....... ..+.|......+...... ...........+...
T Consensus         2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (220)
T COG0546           2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLP---PLDEEEI-RQLIGLGLDELIERLLGEADEEAAAELVERLREE   77 (220)
T ss_pred             CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCC---CCCHHHH-HHHhcCCHHHHHHHHhccccchhHHHHHHHHHHH
Confidence            57899999999999999999999999999999654   1444444 444577777777776655 222222444444444


Q ss_pred             HHHHhhcc--CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHH
Q 025896           99 FRKLASEQ--LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus        99 ~~~~~~~~--~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      +.......  ..++||+.++|++|++.|++++|+||.+....+..++++|+..+|+.++++++....||+|..+..++++
T Consensus        78 ~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~  157 (220)
T COG0546          78 FLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEK  157 (220)
T ss_pred             HHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHH
Confidence            55444333  5899999999999999999999999999999999999999999999999988889999999999999999


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC-hhhhhccCCcEEecCCCChhhHHHH
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP-EHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      ++++|++++||||+.+|+.+|+++|++++++.+|+. ........++++++++.|  +...+
T Consensus       158 ~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~e--l~~~l  217 (220)
T COG0546         158 LGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAE--LLALL  217 (220)
T ss_pred             hCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHH--HHHHH
Confidence            999988999999999999999999999999999964 566677789999999999  44443

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=100.00  E-value=2.4e-34  Score=217.62  Aligned_cols=205  Identities=23%  Similarity=0.328  Sum_probs=171.2

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC---CchhhhhhHHHHHHH
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD---DLPRGLKFCEDKEAM   98 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   98 (246)
                      +|+|+||+||||+|+...+..++.++++++|.    +.+.......+.|....+.++.+...   .......+...+...
T Consensus         1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGL----SPTPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEER   76 (220)
T ss_pred             CcEEEEecCCCeeccCchHHHHHHHHHHHcCC----CCCHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999954    45555554546688878877777654   223344445555555


Q ss_pred             HHHHhh-ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC--CcceEEEecCCCCCCCCChHHHHHHHH
Q 025896           99 FRKLAS-EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS--DFFQVVILGDECERAKPFPDPYFKALE  175 (246)
Q Consensus        99 ~~~~~~-~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~--~~f~~~~~~~~~~~~kp~~~~~~~~~~  175 (246)
                      +..... ....++||+.++|+.|+++|++++|+||+....++..++++++.  .+|+.++++++....||+|+.|..+++
T Consensus        77 ~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~  156 (220)
T TIGR03351        77 LAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAME  156 (220)
T ss_pred             HHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHH
Confidence            554432 34689999999999999999999999999999999999999998  999999999998889999999999999


Q ss_pred             HcCCC-CCcEEEEecChhhhHHHHhcCCCE-EEEcCCC-ChhhhhccCCcEEecCCCC
Q 025896          176 MLKVS-KDHTFVFEDSVSGIKAGVAAGLPV-VGLTTRN-PEHVLLEANPTFLIKDYDD  230 (246)
Q Consensus       176 ~~~~~-~~~~~~igD~~~Di~~a~~~G~~~-i~v~~~~-~~~~~~~~~~~~~i~~~~e  230 (246)
                      ++++. |++|++|||+.+|+++|+++|+.+ +++.++. .........++++++++.+
T Consensus       157 ~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~  214 (220)
T TIGR03351       157 LTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVAD  214 (220)
T ss_pred             HcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHH
Confidence            99997 799999999999999999999999 8998874 4445555679999999988

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=100.00  E-value=3.3e-34  Score=226.90  Aligned_cols=209  Identities=20%  Similarity=0.360  Sum_probs=177.3

Q ss_pred             CcceEEEeCCCccccChh-hHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC--CchhhhhhHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDP-LHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD--DLPRGLKFCEDKEA   97 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   97 (246)
                      ..++|||||||||+|+.. .+..+|..+++++|+    ..........+.|.+....+..++..  .......+...+..
T Consensus       130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~----~~~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~  205 (381)
T PLN02575        130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGK----SPPPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEE  205 (381)
T ss_pred             CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCC----CCCHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHH
Confidence            689999999999999987 566799999999954    44555555567788888888877653  34445566666666


Q ss_pred             HHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHc
Q 025896           98 MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEML  177 (246)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~  177 (246)
                      .|.........++||+.++|+.|+++|++++|+||.....++..++++|+.++|+.++++++....||+|+.|..+++++
T Consensus       206 ~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~l  285 (381)
T PLN02575        206 IYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLL  285 (381)
T ss_pred             HHHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHc
Confidence            77666555678999999999999999999999999999999999999999999999999999988999999999999999


Q ss_pred             CCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHH
Q 025896          178 KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWS  235 (246)
Q Consensus       178 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~  235 (246)
                      |+.|++|++|||+..|+++|+++|+.+|++.+++...+.  ..++++++++.|+....
T Consensus       286 gl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l--~~Ad~iI~s~~EL~~~~  341 (381)
T PLN02575        286 NFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYEL--GAADLVVRRLDELSIVD  341 (381)
T ss_pred             CCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHh--cCCCEEECCHHHHHHHH
Confidence            999999999999999999999999999999876544432  35899999999975444

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=100.00  E-value=3.4e-34  Score=221.00  Aligned_cols=206  Identities=24%  Similarity=0.276  Sum_probs=163.4

Q ss_pred             CcceEEEeCCCccccChhh-HHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhC-------------CC--C
Q 025896           21 PLEAVLFDVDGTLCDSDPL-HHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF-------------PD--D   84 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~--~   84 (246)
                      ++|+|+||+||||+|+... +..++.++++++|.    +.+.+.+.. ..|.+....+..+.             ..  .
T Consensus         1 ~~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~----~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (253)
T TIGR01422         1 KIEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGV----QITLEEARG-PMGLGKWDHIRALLKMPAVAERWRAKFGRLPT   75 (253)
T ss_pred             CceEEEEeCCCCeecCCCccHHHHHHHHHHHcCC----CccHHHHHH-hcCccHHHHHHHHhcCHHHHHHHHHHhCCCCC
Confidence            3689999999999998653 57889999999853    445554433 34555443333221             11  2


Q ss_pred             chhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc-eEEEecCCCCCC
Q 025896           85 LPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERA  163 (246)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~~  163 (246)
                      ......+...+...+.........++||+.++|+.|+++|++++|+||.....++.+++++|+..+| +.++++++....
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~  155 (253)
T TIGR01422        76 EADIEAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAG  155 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCC
Confidence            2233444444555444444456889999999999999999999999999999999999999999985 999999998899


Q ss_pred             CCChHHHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcCCCEEEEcCCCC------------------------hhhhhc
Q 025896          164 KPFPDPYFKALEMLKVS-KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP------------------------EHVLLE  218 (246)
Q Consensus       164 kp~~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~------------------------~~~~~~  218 (246)
                      ||+|+.|..+++++++. |++|++|||+.+|+.+|+++|+.+|++.+|..                        ..++..
T Consensus       156 KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  235 (253)
T TIGR01422       156 RPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKA  235 (253)
T ss_pred             CCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence            99999999999999995 99999999999999999999999999998854                        245666


Q ss_pred             cCCcEEecCCCCh
Q 025896          219 ANPTFLIKDYDDP  231 (246)
Q Consensus       219 ~~~~~~i~~~~el  231 (246)
                      .+|+++++++.|+
T Consensus       236 ~~~~~v~~~~~el  248 (253)
T TIGR01422       236 AGAHYVIDTLAEL  248 (253)
T ss_pred             cCCCEehhcHHHH
Confidence            7899999999993

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=100.00  E-value=9.9e-34  Score=219.80  Aligned_cols=215  Identities=22%  Similarity=0.293  Sum_probs=166.2

Q ss_pred             cCCcceEEEeCCCccccChhh-HHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhC-------------CC-
Q 025896           19 LAPLEAVLFDVDGTLCDSDPL-HHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF-------------PD-   83 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-   83 (246)
                      |+++|+|+||+||||+|+... +..++.++++.+|.    +.+...... ..|......++.+.             .. 
T Consensus         1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~----~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~   75 (267)
T PRK13478          1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGV----EITLEEARG-PMGLGKWDHIRALLKMPRVAARWQAVFGRL   75 (267)
T ss_pred             CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCC----CCCHHHHHH-hcCCCHHHHHHHHHhcHHHHHHHHHHhCCC
Confidence            356899999999999998643 46899999999854    344444333 34554433333221             11 


Q ss_pred             -CchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc-eEEEecCCCC
Q 025896           84 -DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECE  161 (246)
Q Consensus        84 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~  161 (246)
                       .......+...+...+.........++||+.++|+.|+++|++++|+||.....+...++.+++..+| +.++++++..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~  155 (267)
T PRK13478         76 PTEADVDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVP  155 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCC
Confidence             22233444444455544444456789999999999999999999999999999999999999888874 8999999888


Q ss_pred             CCCCChHHHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcCCCEEEEcCCCC------------------------hhhh
Q 025896          162 RAKPFPDPYFKALEMLKVS-KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP------------------------EHVL  216 (246)
Q Consensus       162 ~~kp~~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~------------------------~~~~  216 (246)
                      ..||+|+.|..+++++++. +++|++|||+.+|+++|+++|+.+|++.+++.                        ..++
T Consensus       156 ~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  235 (267)
T PRK13478        156 AGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARL  235 (267)
T ss_pred             CCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHH
Confidence            8999999999999999996 69999999999999999999999999998854                        2455


Q ss_pred             hccCCcEEecCCCChhhHHHHhhh
Q 025896          217 LEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       217 ~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ...+++++++++.+  +..+++.+
T Consensus       236 ~~~~a~~vi~~~~~--l~~~l~~~  257 (267)
T PRK13478        236 RAAGAHYVIDTIAD--LPAVIADI  257 (267)
T ss_pred             HHcCCCeehhhHHH--HHHHHHHH
Confidence            56789999999999  44545443

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=100.00  E-value=6.1e-34  Score=214.46  Aligned_cols=203  Identities=29%  Similarity=0.379  Sum_probs=166.3

Q ss_pred             EEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-----CchhhhhhHHHHHHHH
Q 025896           25 VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-----DLPRGLKFCEDKEAMF   99 (246)
Q Consensus        25 iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~   99 (246)
                      |+||+||||+|+...+..++..+++++|..   ..+...+.. ..|......+..++..     .......+...+...+
T Consensus         1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (213)
T TIGR01449         1 VLFDLDGTLVDSAPDIAAAVNMALAALGLP---PATLARVIG-FIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHY   76 (213)
T ss_pred             CeecCCCccccCHHHHHHHHHHHHHHCCCC---CCCHHHHHH-HhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHH
Confidence            689999999999999999999999999643   234444433 3566666565555433     2223444455555555


Q ss_pred             HHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          100 RKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       100 ~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      .........++||+.++|+.|+++|++++|+||++...++..++++|+..+|+.++++++....||+|+.|..+++++++
T Consensus        77 ~~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~  156 (213)
T TIGR01449        77 EEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGV  156 (213)
T ss_pred             HHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCC
Confidence            55544457899999999999999999999999999999999999999999999999999888899999999999999999


Q ss_pred             CCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC-hhhhhccCCcEEecCCCCh
Q 025896          180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP-EHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       180 ~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~i~~~~el  231 (246)
                      +|+++++|||+.+|+.+|+++|++++++.++.. ........++++++++.++
T Consensus       157 ~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l  209 (213)
T TIGR01449       157 APQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNEL  209 (213)
T ss_pred             ChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHH
Confidence            999999999999999999999999999998853 3344456899999999983

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK11587 putative phosphatase; Provisional

Probab=100.00  E-value=4.4e-33  Score=210.05  Aligned_cols=203  Identities=22%  Similarity=0.304  Sum_probs=160.4

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-CchhhhhhHHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-DLPRGLKFCEDKEAM   98 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   98 (246)
                      |++|+|+||+||||+|+...+..++..+++++|++      .......+.|.+....++.+... ............. .
T Consensus         1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   73 (218)
T PRK11587          1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIA------PDEVLNFIHGKQAITSLRHFMAGASEAEIQAEFTRLE-Q   73 (218)
T ss_pred             CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCC------HHHHHHHHcCCCHHHHHHHHhccCCcHHHHHHHHHHH-H
Confidence            35799999999999999999999999999999642      23334455677777777666543 2222222222111 1


Q ss_pred             HHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcC
Q 025896           99 FRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLK  178 (246)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~  178 (246)
                      +.........++||+.++|+.|+++|++++|+||+........++..++ .+|+.++++++....||+|+.|..+++++|
T Consensus        74 ~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g  152 (218)
T PRK11587         74 IEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLG  152 (218)
T ss_pred             HHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcC
Confidence            2222234678999999999999999999999999988878888888888 457888888888889999999999999999


Q ss_pred             CCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChh
Q 025896          179 VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPK  232 (246)
Q Consensus       179 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~  232 (246)
                      ++|++|++|||+..|+++|+++|+.++++.++....+  ...++++++++.|+.
T Consensus       153 ~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~--~~~~~~~~~~~~el~  204 (218)
T PRK11587        153 LAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPR--LDEVDLVLHSLEQLT  204 (218)
T ss_pred             CCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhh--hccCCEEecchhhee
Confidence            9999999999999999999999999999987754332  346899999999954

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=100.00  E-value=8.7e-33  Score=210.07  Aligned_cols=210  Identities=27%  Similarity=0.353  Sum_probs=171.5

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-----CchhhhhhHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-----DLPRGLKFCE   93 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~   93 (246)
                      .+++++|+||+||||+++...+..++..+++.+|.+   ..+...+ ..+.|......+...+..     ..........
T Consensus         3 ~~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (226)
T PRK13222          3 FMDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLP---PAGEERV-RTWVGNGADVLVERALTWAGREPDEELLEKLRE   78 (226)
T ss_pred             CCcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCC---CCCHHHH-HHHhCccHHHHHHHHHhhccCCccHHHHHHHHH
Confidence            466899999999999999988889999999999543   2233333 345566666655554432     3344455555


Q ss_pred             HHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHH
Q 025896           94 DKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKA  173 (246)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~  173 (246)
                      .+...+.........++||+.++|+.|++.|++++++||+....++.+++++++..+|+.+++++.....||+|+.++.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~  158 (226)
T PRK13222         79 LFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLA  158 (226)
T ss_pred             HHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHH
Confidence            55666665544467899999999999999999999999999999999999999999999999998888899999999999


Q ss_pred             HHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC-hhhhhccCCcEEecCCCChh
Q 025896          174 LEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP-EHVLLEANPTFLIKDYDDPK  232 (246)
Q Consensus       174 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~i~~~~el~  232 (246)
                      +++++++++++++|||+.+|+++|+.+|+.++++.++.. ..+.....|+++++++.++.
T Consensus       159 ~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~  218 (226)
T PRK13222        159 CEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELL  218 (226)
T ss_pred             HHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHH
Confidence            999999999999999999999999999999999998853 33444568999999999943

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=100.00  E-value=3.2e-32  Score=211.05  Aligned_cols=212  Identities=24%  Similarity=0.326  Sum_probs=167.5

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-------CchhhhhhH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-------DLPRGLKFC   92 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~   92 (246)
                      ..+|+|+||+||||+|+...+..++..+++++|.    ..........+.|......+..++..       .......+.
T Consensus        11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~----~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   86 (272)
T PRK13223         11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGR----PPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQAL   86 (272)
T ss_pred             ccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCC----CCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHH
Confidence            5688999999999999999999999999999954    33222222345566655555544321       122233333


Q ss_pred             HHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHH
Q 025896           93 EDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFK  172 (246)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~  172 (246)
                      ..+.+.+... .....++||+.++|+.|++.|++++|+||.+...++..++++++..+|+.+++++..+..||+|..++.
T Consensus        87 ~~~~~~~~~~-~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~  165 (272)
T PRK13223         87 ALFMEAYADS-HELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLF  165 (272)
T ss_pred             HHHHHHHHhc-CcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHH
Confidence            3344444332 124678999999999999999999999999999999999999999999999999888889999999999


Q ss_pred             HHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCC-ChhhhhccCCcEEecCCCChhhHHHHh
Q 025896          173 ALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRN-PEHVLLEANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       173 ~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~-~~~~~~~~~~~~~i~~~~el~~~~~l~  238 (246)
                      +++++|+++++|++|||+.+|+++|+++|+.++++.+|. ...++....++++++++.+  +..++.
T Consensus       166 ~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~e--l~~~~~  230 (272)
T PRK13223        166 VMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRA--LLPGCA  230 (272)
T ss_pred             HHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHH--HHHHHh
Confidence            999999999999999999999999999999999999884 3444455689999999999  444443

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=100.00  E-value=5.2e-32  Score=208.96  Aligned_cols=212  Identities=20%  Similarity=0.258  Sum_probs=167.2

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAM   98 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (246)
                      +..+|+|+||+||||+|+...+..++.++++++|+.   ..+.+.+ ..+.|......++.+. ........+...+...
T Consensus        59 ~~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~---~~~~~~~-~~~~g~~~~~i~~~~~-~~~~~~~~~~~~~~~~  133 (273)
T PRK13225         59 PQTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYD---PIDERDY-AQLRQWSSRTIVRRAG-LSPWQQARLLQRVQRQ  133 (273)
T ss_pred             hhhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCC---CCCHHHH-HHHhCccHHHHHHHcC-CCHHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999653   2344433 3444655555555432 2222334444445444


Q ss_pred             HHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcC
Q 025896           99 FRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLK  178 (246)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~  178 (246)
                      +... ....+++||+.++|+.|+++|++++|+||+....+...++++|+.++|+.+++++..   .+++..+..++++++
T Consensus       134 ~~~~-~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~---~~k~~~~~~~l~~~~  209 (273)
T PRK13225        134 LGDC-LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI---LSKRRALSQLVAREG  209 (273)
T ss_pred             HHhh-cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---CCCHHHHHHHHHHhC
Confidence            4443 346789999999999999999999999999999999999999999999988877654   245688999999999


Q ss_pred             CCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC-hhhhhccCCcEEecCCCChhhHHHHhhhh
Q 025896          179 VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP-EHVLLEANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       179 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                      ++|++|++|||+.+|+.+|+++|+.+|++.++.. ..++....|+++++++.+  ++.++.++.
T Consensus       210 ~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~e--L~~~~~~~~  271 (273)
T PRK13225        210 WQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSD--LLQAVTQLM  271 (273)
T ss_pred             cChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHH--HHHHHHHHh
Confidence            9999999999999999999999999999999854 444556789999999999  666666553

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=100.00  E-value=9.3e-32  Score=201.18  Aligned_cols=201  Identities=27%  Similarity=0.379  Sum_probs=159.5

Q ss_pred             EEEeCCCccccChhhHHHHHHHHHHHh-cCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHHHHh
Q 025896           25 VLFDVDGTLCDSDPLHHYAFREMLQEI-GFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLA  103 (246)
Q Consensus        25 iifD~DGTL~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (246)
                      |+||+||||+|+...+..++.++++++ |..   ..+.+.+ ..+.|......++.+. ........+.   ...+ . .
T Consensus         1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~g~~~~~~~~~~~-~~~~~~~~~~---~~~~-~-~   70 (205)
T TIGR01454         1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDG---PAPFEEY-RRHLGRYFPDIMRIMG-LPLEMEEPFV---RESY-R-L   70 (205)
T ss_pred             CeecCcCccccCHHHHHHHHHHHHHHhcCCC---CCCHHHH-HHHhCccHHHHHHHcC-CCHHHHHHHH---HHHH-H-h
Confidence            689999999999999999999999884 542   2344443 3344666555555432 1111111111   1111 1 2


Q ss_pred             hccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 025896          104 SEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       104 ~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      .....++||+.++|++|+++|++++|+||.....++..++++|+..+|+.++++++....||+++.|+.+++++++++++
T Consensus        71 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~  150 (205)
T TIGR01454        71 AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPED  150 (205)
T ss_pred             hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhh
Confidence            34688999999999999999999999999999999999999999999999999988888999999999999999999999


Q ss_pred             EEEEecChhhhHHHHhcCCCEEEEcCCC-ChhhhhccCCcEEecCCCChhhHHHH
Q 025896          184 TFVFEDSVSGIKAGVAAGLPVVGLTTRN-PEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       184 ~~~igD~~~Di~~a~~~G~~~i~v~~~~-~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      +++|||+.+|+.+|+++|++++++.+|. ...++....++++++++.+  +..++
T Consensus       151 ~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~--l~~~~  203 (205)
T TIGR01454       151 AVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQS--LLALC  203 (205)
T ss_pred             eEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHH--HHHHh
Confidence            9999999999999999999999999995 4555556789999999988  44443

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=100.00  E-value=3.3e-32  Score=206.17  Aligned_cols=205  Identities=20%  Similarity=0.315  Sum_probs=149.0

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhc------CCC----HHHHHHHhCCC-Cchhhhh
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIA------GKH----NIDIAKILFPD-DLPRGLK   90 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~-~~~~~~~   90 (246)
                      +++|+||+||||+|+...+..++..+.+.+... |.+.+.+.+...+.      +..    .......+... ...    
T Consensus         2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   76 (221)
T TIGR02253         2 IKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEA-GLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPK----   76 (221)
T ss_pred             ceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHC-CCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHH----
Confidence            789999999999999988888777655433111 33344443322221      110    11111111111 111    


Q ss_pred             hHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHH
Q 025896           91 FCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPY  170 (246)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~  170 (246)
                      ........+.........++||+.++|++|+++|++++|+||++...++..++++|+..+|+.++++++.+..||+|+.|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~  156 (221)
T TIGR02253        77 LVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIF  156 (221)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHH
Confidence            11111122222222346899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChh-h-hhccCCcEEecCCCCh
Q 025896          171 FKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEH-V-LLEANPTFLIKDYDDP  231 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~-~-~~~~~~~~~i~~~~el  231 (246)
                      +.+++++|++++++++|||+. +|+.+|+++|+.+|++.++.... + .....++++++++.|+
T Consensus       157 ~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el  220 (221)
T TIGR02253       157 YAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL  220 (221)
T ss_pred             HHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence            999999999999999999998 89999999999999998875322 1 2234688999998873

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=100.00  E-value=5.5e-32  Score=203.34  Aligned_cols=187  Identities=37%  Similarity=0.543  Sum_probs=150.8

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC--Cch-hhhhhHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD--DLP-RGLKFCEDKEA   97 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~   97 (246)
                      ++|+++|||||||+|+...+.++|.++++++    |...+.+..... .|.........+...  ... ...........
T Consensus         1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~----g~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEY----GIEISDEEIREL-HGGGIARIIDLLRKLAAGEDPADLAELERLLY   75 (221)
T ss_pred             CCcEEEEcCCCCcCcchHHHHHHHHHHHHHc----CCCCCHHHHHHH-HCCChHHHHHHHHHHhcCCcccCHHHHHHHHH
Confidence            4789999999999999999999999999999    445666665555 454433333333322  111 11112222222


Q ss_pred             HHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHc
Q 025896           98 MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEML  177 (246)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~  177 (246)
                      ..........++.||+.++|+.|+++|+.+++.|++....++..+..+|+.++|+.+++++++..+||+|+.|..+++++
T Consensus        76 ~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~L  155 (221)
T COG0637          76 EAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERL  155 (221)
T ss_pred             HHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHc
Confidence            22233345689999999999999999999999999999999999999999999999999999989999999999999999


Q ss_pred             CCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC
Q 025896          178 KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP  212 (246)
Q Consensus       178 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~  212 (246)
                      |++|++|++|+|+.+++++|+++||.++++..++.
T Consensus       156 gv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~  190 (221)
T COG0637         156 GVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHD  190 (221)
T ss_pred             CCChHHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence            99999999999999999999999999999988544

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=100.00  E-value=4.8e-32  Score=205.14  Aligned_cols=209  Identities=24%  Similarity=0.385  Sum_probs=160.5

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-C-chhhhhhHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-D-LPRGLKFCEDKEA   97 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~   97 (246)
                      +++|+|+||+||||+|+...+..++.++++.+|    .+...+.+...+.|.+....+..+... . ......+...+..
T Consensus         2 ~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (221)
T PRK10563          2 SQIEAVFFDCDGTLVDSEVICSRAYVTMFAEFG----ITLSLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRA   77 (221)
T ss_pred             CCCCEEEECCCCCCCCChHHHHHHHHHHHHHcC----CCCCHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999995    345555555566677777777666543 1 1112233333333


Q ss_pred             HHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcce-EEEecCCCCCCCCChHHHHHHHHH
Q 025896           98 MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQ-VVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~-~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      .+.........++||+.++|+.|+   ++++|+||+....+...++++++.++|+ .++++++.+..||+|+.|..++++
T Consensus        78 ~~~~~~~~~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~  154 (221)
T PRK10563         78 EVARLFDSELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEA  154 (221)
T ss_pred             HHHHHHHccCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHH
Confidence            333333346789999999999993   8999999999999999999999999996 677777788999999999999999


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHh
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~  238 (246)
                      ++++|++|++|||+.+|+++|+++|++++++..+....+. ...++.+++++.|  +..++.
T Consensus       155 ~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~-~~~~~~~~~~~~~--l~~~~~  213 (221)
T PRK10563        155 MNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPI-DHPLVTTFTDLAQ--LPELWK  213 (221)
T ss_pred             cCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcch-hhhhhHHHHHHHH--HHHHHH
Confidence            9999999999999999999999999999999654322222 2344566788877  444443

>PLN02940 riboflavin kinase

Probab=100.00  E-value=2.9e-31  Score=214.21  Aligned_cols=209  Identities=26%  Similarity=0.397  Sum_probs=168.8

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC--CchhhhhhHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD--DLPRGLKFCEDKEA   97 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   97 (246)
                      ..+|+|+||+||||+|+...+..++..+++++|.    ..+.... ....|.+.......++..  .......+...+..
T Consensus         9 ~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~----~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (382)
T PLN02940          9 KLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGK----QWDGREA-QKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITP   83 (382)
T ss_pred             ccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCC----CCCHHHH-HHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            3489999999999999999999999999999954    4555544 345576666665555443  12223334444444


Q ss_pred             HHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH-hcCCCCcceEEEecCCCCCCCCChHHHHHHHHH
Q 025896           98 MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMIS-KLGLSDFFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~-~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      .+.... ....++||+.++|+.|+++|++++|+||.....+...+. ..++.++|+.++++++....||+|+.|..++++
T Consensus        84 ~~~~~~-~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~  162 (382)
T PLN02940         84 LLSEQW-CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKR  162 (382)
T ss_pred             HHHHHH-ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHH
Confidence            444433 357899999999999999999999999999999888887 789999999999999999999999999999999


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHH
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWS  235 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~  235 (246)
                      ++++|++|++|||+..|+++|+++|+.++++.++..... ....++++++++.|+....
T Consensus       163 lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~-~~~~ad~~i~sl~el~~~~  220 (382)
T PLN02940        163 LNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTH-LYSSADEVINSLLDLQPEK  220 (382)
T ss_pred             cCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchh-hccCccEEeCCHhHcCHHH
Confidence            999999999999999999999999999999988754332 3457899999999965444

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.98  E-value=3e-30  Score=201.18  Aligned_cols=213  Identities=24%  Similarity=0.322  Sum_probs=154.8

Q ss_pred             cCCcceEEEeCCCccccCh-hhHHHHHHHHHHHhcCCCCCCCchHHHHHH-hcCCCHHHHHHHh----CC--------CC
Q 025896           19 LAPLEAVLFDVDGTLCDSD-PLHHYAFREMLQEIGFNDGVPITEDFFVEN-IAGKHNIDIAKIL----FP--------DD   84 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~--------~~   84 (246)
                      ..++++|+|||||||+|+. ..+..++.++++.+|++ ....+...+... ..|.........+    +.        ..
T Consensus        37 ~~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (286)
T PLN02779         37 SALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLR-PVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKD  115 (286)
T ss_pred             ccCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCC-CCCCCHHHHHHHHccCCChHHHHHHHHHcCCCccccccCCcc
Confidence            3568999999999999999 99999999999999653 112233322211 1343333222222    11        00


Q ss_pred             chh----hhhhHHHHHHHHHHHhhc-cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCC---CCcceEEEe
Q 025896           85 LPR----GLKFCEDKEAMFRKLASE-QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGL---SDFFQVVIL  156 (246)
Q Consensus        85 ~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l---~~~f~~~~~  156 (246)
                      ...    ...+.......|...... .+.++||+.++|+.|+++|++++|+||.....+...++.++.   ..+|+.+ +
T Consensus       116 ~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~  194 (286)
T PLN02779        116 EEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-A  194 (286)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-e
Confidence            111    112222233444444332 358999999999999999999999999999999888887643   3344544 6


Q ss_pred             cCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhH
Q 025896          157 GDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLW  234 (246)
Q Consensus       157 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~  234 (246)
                      +++.+..||+|++|..++++++++|++|++|||+.+|+++|+++|+.+|++.+++...+.. ..++++++++.++...
T Consensus       195 ~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l-~~ad~vi~~~~~l~~~  271 (286)
T PLN02779        195 GDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDF-SGADAVFDCLGDVPLE  271 (286)
T ss_pred             ccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCcccccc-CCCcEEECChhhcchh
Confidence            7777889999999999999999999999999999999999999999999998885433322 4789999999996643

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.98  E-value=9.2e-31  Score=192.94  Aligned_cols=179  Identities=28%  Similarity=0.567  Sum_probs=148.5

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-----CchhhhhhHHHHH
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-----DLPRGLKFCEDKE   96 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~   96 (246)
                      +|+|+||+||||+|+...+..++..+++++|.    ..+ ..+...+.|......+..+...     .......+...+.
T Consensus         1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~----~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGI----EFD-KQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKN   75 (185)
T ss_pred             CCeEEEcCCCcccCChHHHHHHHHHHHHHcCC----CCC-HHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence            58999999999999999999999999999954    344 3444556677777666666442     3334444555555


Q ss_pred             HHHHHHh-hccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHH
Q 025896           97 AMFRKLA-SEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALE  175 (246)
Q Consensus        97 ~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~  175 (246)
                      ..+.+.. .....++||+.++|+.|+++|++++++|++  ..++..++++|+..+|+.++++++.+..||+|+.|..+++
T Consensus        76 ~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~  153 (185)
T TIGR02009        76 ELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAE  153 (185)
T ss_pred             HHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHH
Confidence            5555544 234789999999999999999999999998  6688899999999999999999988899999999999999


Q ss_pred             HcCCCCCcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          176 MLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       176 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      +++++|+++++|||+.+|+++|+++|+++++|
T Consensus       154 ~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       154 LLGVSPNECVVFEDALAGVQAARAAGMFAVAV  185 (185)
T ss_pred             HcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence            99999999999999999999999999998875

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK09449 dUMP phosphatase; Provisional

Probab=99.97  E-value=3.3e-30  Score=195.53  Aligned_cols=207  Identities=20%  Similarity=0.260  Sum_probs=147.5

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHH-hcCCCHHHHHHHhCCCCchhh-----hhh---
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVEN-IAGKHNIDIAKILFPDDLPRG-----LKF---   91 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~---   91 (246)
                      ++|+|+||+||||+|..  ...++.++++.+|.    ..+...+... ..+.+....+... .......     ..+   
T Consensus         2 ~~k~iiFDlDGTLid~~--~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   74 (224)
T PRK09449          2 KYDWILFDADETLFHFD--AFAGLQRMFSRYGV----DFTAEDFQDYQAVNKPLWVDYQNG-AITALQLQHTRFESWAEK   74 (224)
T ss_pred             CccEEEEcCCCchhcch--hhHHHHHHHHHhCC----CCcHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence            58999999999999854  35778888888854    3333322221 0111111111000 0000000     000   


Q ss_pred             ----HHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCCh
Q 025896           92 ----CEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFP  167 (246)
Q Consensus        92 ----~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~  167 (246)
                          ...+...+.........++||+.++|+.|+ .|++++|+||+....++..++++|+.++|+.++++++.+..||+|
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p  153 (224)
T PRK09449         75 LNVTPGELNSAFLNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDV  153 (224)
T ss_pred             cCCCHHHHHHHHHHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCH
Confidence                111223333333345789999999999999 579999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCC-CcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHh
Q 025896          168 DPYFKALEMLKVSK-DHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       168 ~~~~~~~~~~~~~~-~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~  238 (246)
                      ++|..+++++|+.+ ++|++|||+. +|+.+|+++|+.++++.++... ......|+++++++.|  +..+++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~-~~~~~~~~~~i~~~~e--l~~~l~  223 (224)
T PRK09449        154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGRE-QPEGIAPTYQVSSLSE--LEQLLC  223 (224)
T ss_pred             HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCC-CCCCCCCeEEECCHHH--HHHHHh
Confidence            99999999999854 7999999998 7999999999999999854322 1222468999999998  555543

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.97  E-value=2.7e-30  Score=190.89  Aligned_cols=182  Identities=26%  Similarity=0.447  Sum_probs=146.3

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC--CchhhhhhHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD--DLPRGLKFCEDKEA   97 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   97 (246)
                      .++|+|+||+||||+|+...+..++..+++++|.    +.+... .....|.+....+..+...  .......+...+..
T Consensus         3 ~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~----~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (188)
T PRK10725          3 DRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGL----QFDEQA-MVALNGSPTWRIAQAIIELNQADLDPHALAREKTE   77 (188)
T ss_pred             CcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCC----CCCHHH-HHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            4579999999999999999999999999999954    344333 3445677666655555432  11112223333334


Q ss_pred             HHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHc
Q 025896           98 MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEML  177 (246)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~  177 (246)
                      .+.........++|+ .++|+.|++. ++++|+||+....++..++++|+.++|+.++++++.+..||+|+.|..+++++
T Consensus        78 ~~~~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~  155 (188)
T PRK10725         78 AVKSMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLM  155 (188)
T ss_pred             HHHHHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHc
Confidence            444444445678886 6899999876 89999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcEEEEecChhhhHHHHhcCCCEEEEc
Q 025896          178 KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLT  208 (246)
Q Consensus       178 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~  208 (246)
                      +++|++|++|||+.+|+++|+++|+++|++.
T Consensus       156 ~~~~~~~l~igDs~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        156 GVQPTQCVVFEDADFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             CCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence            9999999999999999999999999999984

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.97  E-value=3.1e-30  Score=195.80  Aligned_cols=201  Identities=22%  Similarity=0.332  Sum_probs=150.3

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCC-C-Cchh-----hhhh---
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFP-D-DLPR-----GLKF---   91 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-----~~~~---   91 (246)
                      +|+|+||+||||+|+......++..+++.+|.    ......... +.+.. ...+..+.. . ....     ...+   
T Consensus         1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGI----PLTEDMFAQ-YKEIN-QGLWRAYEEGKITKDEVVNTRFSALLKE   74 (224)
T ss_pred             CCEEEEcCcCcccccchHHHHHHHHHHHHhCC----CccHHHHHH-HHHHh-HHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999998854    333222111 11100 011111100 0 0000     0000   


Q ss_pred             ------HHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCC
Q 025896           92 ------CEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKP  165 (246)
Q Consensus        92 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp  165 (246)
                            ...+...+.........++||+.++|++|++. ++++|+||+....++..++++++..+||.++++++.+..||
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP  153 (224)
T TIGR02254        75 YNTEADEALLNQKYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKP  153 (224)
T ss_pred             hCCCCcHHHHHHHHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCC
Confidence                  01223333333333468999999999999999 99999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHc-CCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCC
Q 025896          166 FPDPYFKALEML-KVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD  230 (246)
Q Consensus       166 ~~~~~~~~~~~~-~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~e  230 (246)
                      +|..|..+++++ +++|++++||||+. +|+.+|+++|++++++.++.... .....++++++++.|
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~-~~~~~~~~~~~~~~e  219 (224)
T TIGR02254       154 DKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPN-PDDIIPTYEIRSLEE  219 (224)
T ss_pred             CHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCC-CCCCCCceEECCHHH
Confidence            999999999999 99999999999998 79999999999999998764332 233578899999988

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.97  E-value=9e-30  Score=211.34  Aligned_cols=214  Identities=18%  Similarity=0.162  Sum_probs=165.1

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCC--CCCCCchHHHHHHhcCCCHHHHHHHhCCC-CchhhhhhHHHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFN--DGVPITEDFFVENIAGKHNIDIAKILFPD-DLPRGLKFCEDK   95 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   95 (246)
                      .+++++|+||+||||+|+...+..+|.+++++++..  ++...+.+. .....|.+..+.+..+... ...........+
T Consensus       238 ~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~~~~~l~~~~~~~~~~~~~~~~  316 (459)
T PRK06698        238 NEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDK-YREIMGVPLPKVWEALLPDHSLEIREQTDAYF  316 (459)
T ss_pred             HHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHH-HHHHcCCChHHHHHHHhhhcchhHHHHHHHHH
Confidence            456899999999999999999999999999998411  011122333 3445688888888777654 322223333333


Q ss_pred             HHHHHHHh-hccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHH
Q 025896           96 EAMFRKLA-SEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKAL  174 (246)
Q Consensus        96 ~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~  174 (246)
                      ...+.... ....+++||+.++|++|+++|++++|+||+....++..++++++.++|+.++++++.. .+|+|+.+..++
T Consensus       317 ~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-~~~kP~~~~~al  395 (459)
T PRK06698        317 LERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-SLNKSDLVKSIL  395 (459)
T ss_pred             HHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-CCCCcHHHHHHH
Confidence            33333322 2357899999999999999999999999999999999999999999999999988763 467888999999


Q ss_pred             HHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhh
Q 025896          175 EMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       175 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      +++  +|++|++|||+.+|+.+|+++|+.++++.++....+.. ..++++++++.|  +..++..
T Consensus       396 ~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~-~~~d~~i~~l~e--l~~~l~~  455 (459)
T PRK06698        396 NKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDEL-AQADIVIDDLLE--LKGILST  455 (459)
T ss_pred             Hhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCccccc-CCCCEEeCCHHH--HHHHHHH
Confidence            886  46899999999999999999999999999875433322 468999999998  5555544

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.97  E-value=2.2e-29  Score=224.93  Aligned_cols=219  Identities=25%  Similarity=0.356  Sum_probs=175.9

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC---CchhhhhhHHHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD---DLPRGLKFCEDK   95 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   95 (246)
                      .+++|+|+|||||||+|+...+.+++.++++++|+    +.+.+.+. .+.|......+..+...   ...........+
T Consensus        72 ~~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~----~it~e~~~-~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~  146 (1057)
T PLN02919         72 WGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGV----EVTVEDFV-PFMGTGEANFLGGVASVKGVKGFDPDAAKKRF  146 (1057)
T ss_pred             CCCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCC----CCCHHHHH-HHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence            45799999999999999999999999999999954    45555554 44566666655444322   111112222222


Q ss_pred             HHHHHHHhh--ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC-CcceEEEecCCCCCCCCChHHHHH
Q 025896           96 EAMFRKLAS--EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS-DFFQVVILGDECERAKPFPDPYFK  172 (246)
Q Consensus        96 ~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~  172 (246)
                      ...+.....  ....++||+.++|++|+++|++++|+||.....++..++++++. .+|+.++++++....||+|++|..
T Consensus       147 ~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~  226 (1057)
T PLN02919        147 FEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLA  226 (1057)
T ss_pred             HHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHH
Confidence            233322211  12357999999999999999999999999999999999999996 789999999999999999999999


Q ss_pred             HHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhhhc
Q 025896          173 ALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK  242 (246)
Q Consensus       173 ~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~~  242 (246)
                      +++++++.|++|++|||+..|+++|+++|+.+|++.++....++...+|+++++++.++.+..++.....
T Consensus       227 a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~  296 (1057)
T PLN02919        227 AAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSD  296 (1057)
T ss_pred             HHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCC
Confidence            9999999999999999999999999999999999999877777777899999999999887777765444

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.97  E-value=1.5e-29  Score=186.55  Aligned_cols=177  Identities=28%  Similarity=0.467  Sum_probs=142.6

Q ss_pred             eEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-----CchhhhhhHHHHHHH
Q 025896           24 AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-----DLPRGLKFCEDKEAM   98 (246)
Q Consensus        24 ~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~   98 (246)
                      +|+||+||||+|+...+..++.++++.+|+    +.+... ...+.|......+..++..     .......+.......
T Consensus         1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~----~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (185)
T TIGR01990         1 AVIFDLDGVITDTAEYHYLAWKALADELGI----PFDEEF-NESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDY   75 (185)
T ss_pred             CeEEcCCCccccChHHHHHHHHHHHHHcCC----CCCHHH-HHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999954    444443 3445566666666665443     223333444444444


Q ss_pred             HHHHhh--ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHH
Q 025896           99 FRKLAS--EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus        99 ~~~~~~--~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      +.....  ....++||+.++|+.|+++|++++|+||+.  ..+..++++++..+|+.++++++.+..||+|+.|+.++++
T Consensus        76 ~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~  153 (185)
T TIGR01990        76 YVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEG  153 (185)
T ss_pred             HHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHH
Confidence            443332  235789999999999999999999999874  3467899999999999999999999999999999999999


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      ++++|+++++|||+.+|+++|+++|+++|+|
T Consensus       154 ~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v  184 (185)
T TIGR01990       154 LGVSPSECIGIEDAQAGIEAIKAAGMFAVGV  184 (185)
T ss_pred             cCCCHHHeEEEecCHHHHHHHHHcCCEEEec
Confidence            9999999999999999999999999999987

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.97  E-value=8.1e-30  Score=192.40  Aligned_cols=130  Identities=14%  Similarity=0.143  Sum_probs=109.9

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      ....++||+.++|+.|+++|++++|+||+....++..++++|+.++|+.++++++.+..||+|+.|..+++++|++|++|
T Consensus        90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~  169 (224)
T PRK14988         90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERT  169 (224)
T ss_pred             ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHE
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecChhhhHHHHhcCCC-EEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhh
Q 025896          185 FVFEDSVSGIKAGVAAGLP-VVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~-~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      ++|||+.+|+++|+++|+. ++++..+......   .+.....++.+  +.+++..
T Consensus       170 l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~---~~~~~~~~~~~--~~~~~~~  220 (224)
T PRK14988        170 LFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAE---KQYQRHPSLND--YRRLIPS  220 (224)
T ss_pred             EEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccc---hhccCCCcHHH--HHHHhhh
Confidence            9999999999999999998 5678776533322   22233445555  4444433

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.97  E-value=2.1e-29  Score=187.47  Aligned_cols=106  Identities=22%  Similarity=0.322  Sum_probs=101.9

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ...++||+.++|++|+++|++++|+||++...++..++++|+.++|+.++++++.+..||+|++|+.+++++|++|++++
T Consensus        90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~  169 (198)
T TIGR01428        90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL  169 (198)
T ss_pred             cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcCCC
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~~~  211 (246)
                      +|||+.+|+.+|+++|+.++++.+++
T Consensus       170 ~vgD~~~Di~~A~~~G~~~i~v~r~~  195 (198)
T TIGR01428       170 FVASNPWDLGGAKKFGFKTAWVNRPG  195 (198)
T ss_pred             EEeCCHHHHHHHHHCCCcEEEecCCC
Confidence            99999999999999999999998764

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.96  E-value=2.8e-28  Score=182.19  Aligned_cols=179  Identities=22%  Similarity=0.293  Sum_probs=132.0

Q ss_pred             ceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHH----HHh-------------cCCCHHHH----HHHhC
Q 025896           23 EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFV----ENI-------------AGKHNIDI----AKILF   81 (246)
Q Consensus        23 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------------~~~~~~~~----~~~~~   81 (246)
                      |+|+||+||||+|+...+..++.++++++|.    ........    ..+             .|......    ....+
T Consensus         1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   76 (203)
T TIGR02252         1 KLITFDAVGTLLALKEPVGEVYCEIARKYGV----EVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTF   76 (203)
T ss_pred             CeEEEecCCceeeeCCCHHHHHHHHHHHhCC----CCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999965    33332211    111             13332211    22222


Q ss_pred             CC-CchhhhhhHHHHHHHHHHHh-hccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCC
Q 025896           82 PD-DLPRGLKFCEDKEAMFRKLA-SEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDE  159 (246)
Q Consensus        82 ~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~  159 (246)
                      .. .......+.......+.... .....++||+.++|++|++.|++++|+||.... ++..++++|+..+|+.++++++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~  155 (203)
T TIGR02252        77 GRAGVPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYE  155 (203)
T ss_pred             HhcCCCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecc
Confidence            11 11111111111222222111 123578999999999999999999999998765 5778999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEE
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVG  206 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~  206 (246)
                      .+..||+|+.|..+++++|++|+++++|||+. +|+.+|+++|+.+|+
T Consensus       156 ~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       156 VGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             cCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence            99999999999999999999999999999998 899999999999874

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.96  E-value=6.9e-29  Score=181.31  Aligned_cols=174  Identities=30%  Similarity=0.521  Sum_probs=139.3

Q ss_pred             EEEeCCCccccChhhHHHHHHH-HHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHHHH-
Q 025896           25 VLFDVDGTLCDSDPLHHYAFRE-MLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKL-  102 (246)
Q Consensus        25 iifD~DGTL~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  102 (246)
                      |+||+||||+++...+.+++.. +.+.++    ...+...... ..+....+.+..++......    .....+.+.+. 
T Consensus         1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~   71 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPAIFRALQRLALEEFG----LEISAEELRE-LFGKSYEEALERLLERFGID----PEEIQELFREYN   71 (176)
T ss_dssp             EEEESBTTTEEHHHHHHHHHHHHHHHHTT----HHHHHHHHHH-HTTSHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
T ss_pred             cEEECCCCcEeCHHHHHHHHHHHHHHHhC----CCCCHHHHHH-HhCCCHHHHHHHhhhccchh----HHHHHHHhhhhh
Confidence            7999999999999988888887 477773    3333333333 23555555555554431111    12222233332 


Q ss_pred             hhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 025896          103 ASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKD  182 (246)
Q Consensus       103 ~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~  182 (246)
                      .....+++||+.++|+.|+++|++++++||.+...++..++++|+..+|+.++++++.+..||+++.|+.++++++++|+
T Consensus        72 ~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~  151 (176)
T PF13419_consen   72 LESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPE  151 (176)
T ss_dssp             HHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGG
T ss_pred             hhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcc
Confidence            23578999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEecChhhhHHHHhcCCCEEEE
Q 025896          183 HTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       183 ~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      ++++|||+..|+.+|+++|+.+|+|
T Consensus       152 ~~~~vgD~~~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  152 EILFVGDSPSDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             GEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred             eEEEEeCCHHHHHHHHHcCCeEEeC
Confidence            9999999999999999999999986

...

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.96  E-value=3.9e-28  Score=185.22  Aligned_cols=206  Identities=18%  Similarity=0.233  Sum_probs=140.6

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCC-CC-CCCchHHHH---HHhc--CC----CHH----HHHHHhCCC
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFN-DG-VPITEDFFV---ENIA--GK----HNI----DIAKILFPD   83 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~---~~~~--~~----~~~----~~~~~~~~~   83 (246)
                      +.++|+|+||+||||+|+...+..+++.+++.++.. .. .......+.   ..+.  ..    ...    ..+..++..
T Consensus         7 ~~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   86 (238)
T PRK10748          7 LGRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLD   86 (238)
T ss_pred             CCCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHH
Confidence            446899999999999999999888888877665211 00 011111111   1000  00    000    111111111


Q ss_pred             -C--chhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC
Q 025896           84 -D--LPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC  160 (246)
Q Consensus        84 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~  160 (246)
                       +  ..............+.. +.....++||+.++|++|++. ++++++||++..     ++.+|+..+|+.++++++.
T Consensus        87 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~  159 (238)
T PRK10748         87 AGLSAEEASAGADAAMINFAK-WRSRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH  159 (238)
T ss_pred             cCCCHHHHHHHHHHHHHHHHH-HhhcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccC
Confidence             1  11111111111122222 223478999999999999976 999999998754     4778999999999999999


Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCCh---hhhhccCCcEEecCCCCh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPE---HVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~---~~~~~~~~~~~i~~~~el  231 (246)
                      +..||+|..|..++++++++|++|+||||+. .|+.+|+++|+.++++.++...   .......|+++|+++.||
T Consensus       160 ~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el  234 (238)
T PRK10748        160 GRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASL  234 (238)
T ss_pred             CcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHH
Confidence            9999999999999999999999999999995 9999999999999999886432   111224688999999883

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.96  E-value=8.1e-28  Score=183.15  Aligned_cols=130  Identities=25%  Similarity=0.333  Sum_probs=116.2

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ..+++|++.++|++++.. ++++++||+....+...+.++|+.++||.++++++.+..||+|.+|+.+++++|++|++++
T Consensus        97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l  175 (229)
T COG1011          97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL  175 (229)
T ss_pred             hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence            488999999999999999 9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCh-hhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHh
Q 025896          186 VFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       186 ~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~  238 (246)
                      ||||++ ||+.+|+.+|+.+|+++++..........+++.+.++.+  +..++.
T Consensus       176 ~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~--l~~~~~  227 (229)
T COG1011         176 FVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAE--LLDLLE  227 (229)
T ss_pred             EECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHH--HHHHHh
Confidence            999999 888999999999999988753221112568899999998  555543

>PLN02811 hydrolase

Probab=99.96  E-value=1.2e-27  Score=180.72  Aligned_cols=200  Identities=23%  Similarity=0.360  Sum_probs=152.6

Q ss_pred             CCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-Cc---hhhhhhHHHHHHHHHHHhh
Q 025896           29 VDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-DL---PRGLKFCEDKEAMFRKLAS  104 (246)
Q Consensus        29 ~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~  104 (246)
                      +||||+|+...+..+|..+++++|+    ..+... ...+.|.+.......+... ..   .....+.......+.... 
T Consensus         1 ~DGTL~Ds~~~~~~a~~~~~~~~g~----~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   74 (220)
T PLN02811          1 MDGLLLDTEKFYTEVQEKILARYGK----TFDWSL-KAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLF-   74 (220)
T ss_pred             CCCcceecHHHHHHHHHHHHHHcCC----CCCHHH-HHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH-
Confidence            6999999999999999999999954    444443 3445677766555554332 11   111222222333333322 


Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HhcCCCCcceEEEecC--CCCCCCCChHHHHHHHHHcC---
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI-SKLGLSDFFQVVILGD--ECERAKPFPDPYFKALEMLK---  178 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~--~~~~~kp~~~~~~~~~~~~~---  178 (246)
                      ....++||+.++|+.|+++|++++|+||.........+ +..++.++|+.+++++  +.+..||+|+.|..++++++   
T Consensus        75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~  154 (220)
T PLN02811         75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGP  154 (220)
T ss_pred             hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCC
Confidence            35788999999999999999999999999876555444 3457888999999999  77889999999999999996   


Q ss_pred             CCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHH
Q 025896          179 VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWS  235 (246)
Q Consensus       179 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~  235 (246)
                      ++|++|++|||+..|+++|+++|+++|++.++....... ..++++++++.|+....
T Consensus       155 ~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~-~~~d~vi~~~~e~~~~~  210 (220)
T PLN02811        155 VDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYC-KGADQVLSSLLDFKPEE  210 (220)
T ss_pred             CCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhh-hchhhHhcCHhhCCHHH
Confidence            999999999999999999999999999998875333333 47899999999976665

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.95  E-value=1.8e-27  Score=178.87  Aligned_cols=181  Identities=22%  Similarity=0.214  Sum_probs=125.1

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHH----
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEA----   97 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   97 (246)
                      +|+|+||+||||+++.. ...+|.......|    .+  .......+.+.......+.+. .+......+...+.+    
T Consensus         2 ik~viFDldGtL~d~~~-~~~~~~~~~~~~g----~~--~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~   73 (211)
T TIGR02247         2 IKAVIFDFGGVLLPSPG-VMRRWETERGLPG----LK--DFIVTVNITGPDFNPWARTFE-RGELTAEAFDGLFRHEYGL   73 (211)
T ss_pred             ceEEEEecCCceecCHH-HHHHHHHHcCCCC----Cc--cHHHHHHhcCCCCChHHHHHH-cCCCCHHHHHHHHHHHhcc
Confidence            68999999999999866 5555554443332    21  222222333333222222111 111111111111111    


Q ss_pred             ----------HHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHH--HHHHHHhcCCCCcceEEEecCCCCCCCC
Q 025896           98 ----------MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN--AELMISKLGLSDFFQVVILGDECERAKP  165 (246)
Q Consensus        98 ----------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp  165 (246)
                                .+.........++||+.++|++|+++|++++|+||+....  ....+...++.++|+.++++++.+..||
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP  153 (211)
T TIGR02247        74 RLGHDVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKP  153 (211)
T ss_pred             ccCCCcCchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCC
Confidence                      1111222357789999999999999999999999986543  3334445678899999999998888999


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCC
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~  210 (246)
                      +|..|+.+++++|++|++|+||||+..|+.+|+++|+.++++.++
T Consensus       154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~  198 (211)
T TIGR02247       154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE  198 (211)
T ss_pred             CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence            999999999999999999999999999999999999999999665

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.95  E-value=4.7e-26  Score=169.19  Aligned_cols=173  Identities=22%  Similarity=0.280  Sum_probs=129.3

Q ss_pred             ceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCC---------HHHHHHHhCCC------Cchh
Q 025896           23 EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKH---------NIDIAKILFPD------DLPR   87 (246)
Q Consensus        23 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~------~~~~   87 (246)
                      .+|+||+||||+|+...+..++..+++.+|.   ...+...+.... |..         .......+...      ....
T Consensus         1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~---~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (197)
T TIGR01548         1 QALVLDMDGVMADVSQSYRRAIIDTVEHFGG---VSVTHADIDHTK-LAGNANNDWQLTHRLVVDGLNSASSERVRDAPT   76 (197)
T ss_pred             CceEEecCceEEechHHHHHHHHHHHHHHcC---CCCCHHHHHHHH-HccCccCchHHHHHHHHHhhhcccchhccCCcc
Confidence            3789999999999999999999999999963   244544443332 321         11122222111      1122


Q ss_pred             hhhhHHHHHHHHHHHhh---------ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecC
Q 025896           88 GLKFCEDKEAMFRKLAS---------EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGD  158 (246)
Q Consensus        88 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~  158 (246)
                      ...+...+...+.....         ....+.+++.++|+.|++.|++++|+||.+...++..++++|+..+|+.+++++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~  156 (197)
T TIGR01548        77 LEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWME  156 (197)
T ss_pred             HHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeec
Confidence            33334444444432110         012445566999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc
Q 025896          159 ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAA  200 (246)
Q Consensus       159 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~  200 (246)
                      +... ||+|..+..+++++++++++|++|||+.+|+.+|+++
T Consensus       157 ~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       157 DCPP-KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA  197 (197)
T ss_pred             CCCC-CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence            8776 9999999999999999999999999999999999874

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.95  E-value=9.2e-26  Score=166.01  Aligned_cols=100  Identities=38%  Similarity=0.663  Sum_probs=94.1

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV  186 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  186 (246)
                      ..++||+.++|+.|++.|++++++||+.... ...+.++|+..+|+.++++++.+..||+|..|+.++++++++|+++++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  162 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLF  162 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence            6899999999999999999999999999887 666667999999999999998899999999999999999999999999


Q ss_pred             EecChhhhHHHHhcCCCEEEE
Q 025896          187 FEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       187 igD~~~Di~~a~~~G~~~i~v  207 (246)
                      |||+..|+.+|+++|+.+|++
T Consensus       163 vgD~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       163 VDDSPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             EcCCHHHHHHHHHcCCEEEeC
Confidence            999999999999999999875

HAD subfamilies caused by an overly broad single model.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.94  E-value=3.3e-26  Score=168.35  Aligned_cols=170  Identities=22%  Similarity=0.299  Sum_probs=124.8

Q ss_pred             ceEEEeCCCccccChhhHHHHHHHHHH-----HhcCCCCCCCchH-HHHH---HhcCCCHHHHHHHhCCCCchhhhhhHH
Q 025896           23 EAVLFDVDGTLCDSDPLHHYAFREMLQ-----EIGFNDGVPITED-FFVE---NIAGKHNIDIAKILFPDDLPRGLKFCE   93 (246)
Q Consensus        23 k~iifD~DGTL~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (246)
                      ++|+||+||||+|+...+..++.+.+.     .+|+    +.... ....   ...|......... .....       .
T Consensus         1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~-------~   68 (184)
T TIGR01993         1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKL----SEEEARVLRKDYYREYGTTLAGLMIL-HEIDA-------D   68 (184)
T ss_pred             CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCc----CHHHHHHHHHHHHHHHchHHHHHHHh-hCCCH-------H
Confidence            479999999999998888777776654     3432    22111 1111   0123332332221 11111       1


Q ss_pred             HHHHHHHHH-hhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCC----CCCChH
Q 025896           94 DKEAMFRKL-ASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECER----AKPFPD  168 (246)
Q Consensus        94 ~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----~kp~~~  168 (246)
                      .+...+.+. ......+++|+.++|++|+   ++++|+||++...+...++++|+..+|+.++++++.+.    .||+|+
T Consensus        69 ~~~~~~~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~  145 (184)
T TIGR01993        69 EYLRYVHGRLPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQ  145 (184)
T ss_pred             HHHHHHhccCCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHH
Confidence            122222221 1124678999999999998   47999999999999999999999999999999988776    599999


Q ss_pred             HHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          169 PYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      +|+.+++++|++|+++++|||+..|+.+|+++|+++|+|
T Consensus       146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV  184 (184)
T ss_pred             HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence            999999999999999999999999999999999999875

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.94  E-value=5.7e-25  Score=162.03  Aligned_cols=204  Identities=31%  Similarity=0.475  Sum_probs=167.6

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC--CchhhhhhHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD--DLPRGLKFCEDKEA   97 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   97 (246)
                      ..+-+++||+||||+|++..+.++++..+.++|    ..+++... ....|+...+..+.+...  ......++......
T Consensus         8 ~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~yg----k~~~~~~~-~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~   82 (222)
T KOG2914|consen    8 LKVSACLFDMDGTLVDTEDLYTEAWQELLDRYG----KPYPWDVK-VKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEE   82 (222)
T ss_pred             cceeeEEEecCCcEEecHHHHHHHHHHHHHHcC----CCChHHHH-HHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHH
Confidence            457799999999999999999999999999994    44666655 447788888888888633  33344455555544


Q ss_pred             HHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcC-CCCcceEEEe--cCCCCCCCCChHHHHHHH
Q 025896           98 MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLG-LSDFFQVVIL--GDECERAKPFPDPYFKAL  174 (246)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~-l~~~f~~~~~--~~~~~~~kp~~~~~~~~~  174 (246)
                      ...... ....+.||+.++++.|+.+|++++++|+.+......++.+++ +...|+.++.  ..++..+||+|++|..++
T Consensus        83 ~~~~~~-~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~  161 (222)
T KOG2914|consen   83 ILDRLF-MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAA  161 (222)
T ss_pred             HHHHhc-cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHH
Confidence            444443 468899999999999999999999999999999999998886 7778888777  566788899999999999


Q ss_pred             HHcCCCC-CcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCC
Q 025896          175 EMLKVSK-DHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD  230 (246)
Q Consensus       175 ~~~~~~~-~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~e  230 (246)
                      +.+|..+ ++|++++|++..+++|+++|++++++.... -.......++.+++++.+
T Consensus       162 ~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~-~~~~~~~~~~~~~~~~~~  217 (222)
T KOG2914|consen  162 KRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPD-LSNLFSAGATLILESLED  217 (222)
T ss_pred             HhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCC-cchhhhhccceecccccc
Confidence            9999999 999999999999999999999999998743 333445678888888876

>PHA02597 30

Probab=99.94  E-value=1.3e-25  Score=166.96  Aligned_cols=188  Identities=19%  Similarity=0.178  Sum_probs=128.1

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFR  100 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (246)
                      ++|+|+||+||||+|+.    .++..+++++|+    +.  +.+.... |..........+.........+...+.   .
T Consensus         1 m~k~viFDlDGTLiD~~----~~~~~~~~~~g~----~~--~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~---~   66 (197)
T PHA02597          1 MKPTILTDVDGVLLSWQ----SGLPYFAQKYNI----PT--DHILKMI-QDERFRDPGELFGCDQELAKKLIEKYN---N   66 (197)
T ss_pred             CCcEEEEecCCceEchh----hccHHHHHhcCC----CH--HHHHHHH-hHhhhcCHHHHhcccHHHHHHHhhhhh---H
Confidence            37899999999999944    456777888843    22  3333333 222111112222211112222222222   1


Q ss_pred             HHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC----cceEEEecCCCCCCCCChHHHHHHHHH
Q 025896          101 KLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD----FFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~----~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      ........++||+.++|++|++. ++++++||.+.......++.+++..    +|+.+++++.   .+|+|+.+..++++
T Consensus        67 ~~~~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~  142 (197)
T PHA02597         67 SDFIRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH---DESKEKLFIKAKEK  142 (197)
T ss_pred             HHHHHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc---CcccHHHHHHHHHH
Confidence            23334577999999999999997 5788889877666666667777654    4566666665   36778999999999


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhc--CCCEEEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAA--GLPVVGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~--G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                      +|  |++++||||+.+|+.+|+++  |++++++.+++.   .....+++++.|+.|+
T Consensus       143 ~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~---~~~~~~~~~~~~~~~~  194 (197)
T PHA02597        143 YG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER---DHIPKLAHRVKSWNDI  194 (197)
T ss_pred             hC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh---ccccchhhhhccHHHH
Confidence            99  88899999999999999999  999999988864   2223566888888874

2 hypothetical protein; Provisional

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.94  E-value=2e-25  Score=166.04  Aligned_cols=107  Identities=15%  Similarity=0.201  Sum_probs=96.9

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHh-cCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISK-LGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ..++||+.++|+.|++.|++++|+||++.......+.. .++..+|+.++++++.+..||+|+.|+.+++++|++|++|+
T Consensus        83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l  162 (199)
T PRK09456         83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV  162 (199)
T ss_pred             hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence            45899999999999999999999999987776665554 47888999999999999999999999999999999999999


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcCCCCh
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTTRNPE  213 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~~~~~  213 (246)
                      ||||+..|+.+|+++|+.++++..+...
T Consensus       163 ~vgD~~~di~aA~~aG~~~i~~~~~~~~  190 (199)
T PRK09456        163 FFDDNADNIEAANALGITSILVTDKQTI  190 (199)
T ss_pred             EeCCCHHHHHHHHHcCCEEEEecCCccH
Confidence            9999999999999999999999776433

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.93  E-value=4.7e-25  Score=162.94  Aligned_cols=189  Identities=20%  Similarity=0.275  Sum_probs=139.3

Q ss_pred             ccCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHH----Hh-------------cC-CCHHHHHHH
Q 025896           18 KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVE----NI-------------AG-KHNIDIAKI   79 (246)
Q Consensus        18 ~~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------------~~-~~~~~~~~~   79 (246)
                      ..+++|+|+||++|||+.........+....+.+|+.    ........    .+             .| .+....+..
T Consensus         3 ~~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~----~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~   78 (237)
T KOG3085|consen    3 ELMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLE----YDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPK   78 (237)
T ss_pred             cccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCC----CCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHH
Confidence            4678999999999999998888999999999999654    22211111    11             11 122222222


Q ss_pred             hC----CC-CchhhhhhHHHH-HHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceE
Q 025896           80 LF----PD-DLPRGLKFCEDK-EAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQV  153 (246)
Q Consensus        80 ~~----~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~  153 (246)
                      +.    .. ......+....+ ...+.........+.+++.+++++||+.|..++++||.+.... ..+..+++..+||.
T Consensus        79 lv~~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~  157 (237)
T KOG3085|consen   79 LVESTFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDF  157 (237)
T ss_pred             HHHHHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhh
Confidence            22    21 111111111111 1111221123567788899999999999999999999976544 88888999999999


Q ss_pred             EEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCC
Q 025896          154 VILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       154 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~  211 (246)
                      ++.|...+..||+|.+|+.++++++++|++|+||||+. ||+++|+++|+.++.|.+..
T Consensus       158 vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~  216 (237)
T KOG3085|consen  158 VVESCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSI  216 (237)
T ss_pred             hhhhhhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcccc
Confidence            99999999999999999999999999999999999999 99999999999999997663

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.93  E-value=3.3e-24  Score=153.24  Aligned_cols=154  Identities=28%  Similarity=0.442  Sum_probs=119.8

Q ss_pred             eEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHHHHh
Q 025896           24 AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLA  103 (246)
Q Consensus        24 ~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (246)
                      +|+||+||||+|+...+..++..++++++.      +...+ ....|.......            .....+.++. . .
T Consensus         1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~------~~~~~-~~~~g~~~~~~~------------~~~~~~~~~~-~-~   59 (154)
T TIGR01549         1 AILFDIDGTLVDSSFAIRRAFEETLEEFGE------DFQAL-KALRGLAEELLY------------RIATSFEELL-G-Y   59 (154)
T ss_pred             CeEecCCCcccccHHHHHHHHHHHHHHhcc------cHHHH-HHHHccChHHHH------------HHHHHHHHHh-C-c
Confidence            489999999999999999999999999842      22222 222233221111            0111111111 1 1


Q ss_pred             hccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 025896          104 SEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       104 ~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      ......+||+.++|+.|+++|++++|+||+....+...++.+ +..+|+.++++++.+ .||+|+.|..+++++++++ +
T Consensus        60 ~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~  136 (154)
T TIGR01549        60 DAEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-E  136 (154)
T ss_pred             chhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-C
Confidence            224566799999999999999999999999999999999887 778899999988877 9999999999999999999 9


Q ss_pred             EEEEecChhhhHHHHhcC
Q 025896          184 TFVFEDSVSGIKAGVAAG  201 (246)
Q Consensus       184 ~~~igD~~~Di~~a~~~G  201 (246)
                      |++|||+..|+.+|+++|
T Consensus       137 ~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       137 VLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             EEEEeCCHHHHHHHHHcc
Confidence            999999999999999987

HAD subfamilies caused by an overly broad single model.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.92  E-value=1.1e-23  Score=159.17  Aligned_cols=188  Identities=19%  Similarity=0.181  Sum_probs=126.6

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHH-HHHhcCC-CHHHHHHHhCCC-CchhhhhhHHHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFF-VENIAGK-HNIDIAKILFPD-DLPRGLKFCEDK   95 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~   95 (246)
                      ++++|+++|||||||++++     .+..+++.+|.    ....... .....|. .........+.. ....        
T Consensus        11 ~~~~k~iiFD~DGTL~~~~-----~~~~l~~~~g~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------   73 (219)
T TIGR00338        11 LRSKKLVVFDMDSTLINAE-----TIDEIAKIAGV----EEEVSEITERAMRGELDFKASLRERVALLKGLP--------   73 (219)
T ss_pred             hccCCEEEEeCcccCCCch-----HHHHHHHHhCC----HHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCC--------
Confidence            5678999999999999975     34566666743    2222211 2222221 111111111110 0000        


Q ss_pred             HHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEec-------C---CCCCCCC
Q 025896           96 EAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILG-------D---ECERAKP  165 (246)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~-------~---~~~~~kp  165 (246)
                      .+.+... ....+++||+.++|+.|+++|++++|+|++....++..++++|+..+|...+..       .   .....+|
T Consensus        74 ~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (219)
T TIGR00338        74 VELLKEV-RENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASY  152 (219)
T ss_pred             HHHHHHH-HhcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcc
Confidence            0111222 234679999999999999999999999999999999999999998888543221       1   1123467


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCC
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYD  229 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~  229 (246)
                      ++..++.+++++++++++|++|||+.+|+++|+.+|+.+++-     ..+.....+++++.+.+
T Consensus       153 k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-----~~~~~~~~a~~~i~~~~  211 (219)
T TIGR00338       153 KGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-----AKPKLQQKADICINKKD  211 (219)
T ss_pred             cHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-----CCHHHHHhchhccCCCC
Confidence            899999999999999999999999999999999999986432     22333346788887554

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PLN02954 phosphoserine phosphatase

Probab=99.92  E-value=8.6e-24  Score=160.36  Aligned_cols=194  Identities=17%  Similarity=0.195  Sum_probs=129.7

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcC--CCHHHHHHHhCCCCchhhhhhHHHHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAG--KHNIDIAKILFPDDLPRGLKFCEDKE   96 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (246)
                      .+++|+|+|||||||++++.     +..+++.+|.    ..........+.+  ....+.+...+.....    ......
T Consensus         9 ~~~~k~viFDfDGTL~~~~~-----~~~~~~~~g~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~   75 (224)
T PLN02954          9 WRSADAVCFDVDSTVCVDEG-----IDELAEFCGA----GEAVAEWTAKAMGGSVPFEEALAARLSLFKP----SLSQVE   75 (224)
T ss_pred             HccCCEEEEeCCCcccchHH-----HHHHHHHcCC----hHHHHHHHHHHHCCCCCHHHHHHHHHHHcCC----CHHHHH
Confidence            35689999999999999753     4667777743    2233333333323  2222323222211000    111112


Q ss_pred             HHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC--CcceEEEe--------cCC----CCC
Q 025896           97 AMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS--DFFQVVIL--------GDE----CER  162 (246)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~--~~f~~~~~--------~~~----~~~  162 (246)
                      ..+..   ....++||+.++|+.|+++|++++|+|++....++..++.+|+.  .+|...+.        +..    ...
T Consensus        76 ~~~~~---~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~  152 (224)
T PLN02954         76 EFLEK---RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSR  152 (224)
T ss_pred             HHHHH---ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccC
Confidence            22222   13568999999999999999999999999999999999999996  45643221        111    123


Q ss_pred             CCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCC
Q 025896          163 AKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD  230 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~e  230 (246)
                      .++++..++.++++++.  +++++|||+.+|+.+++.+|+.++...+++...+.....++++++++.+
T Consensus       153 ~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~e  218 (224)
T PLN02954        153 SGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQD  218 (224)
T ss_pred             CccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHH
Confidence            46788899999998875  6899999999999999998888665544433333345678999999988

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.92  E-value=3.3e-24  Score=156.98  Aligned_cols=130  Identities=23%  Similarity=0.323  Sum_probs=105.7

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCH---------------HHHHHHHHhcCCCCcceEEEec-----CCCCCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPR---------------ENAELMISKLGLSDFFQVVILG-----DECERAKP  165 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~---------------~~~~~~l~~~~l~~~f~~~~~~-----~~~~~~kp  165 (246)
                      ...++||+.++|++|++.|++++|+||.+.               ..+...++++|+.  |+.++.+     +..+..||
T Consensus        27 ~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--f~~i~~~~~~~~~~~~~~KP  104 (181)
T PRK08942         27 EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR--LDGIYYCPHHPEDGCDCRKP  104 (181)
T ss_pred             HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc--cceEEECCCCCCCCCcCCCC
Confidence            367899999999999999999999999862               2344556677773  7777654     33567899


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCC--cEEecCCCChhhHHHHhh
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANP--TFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~--~~~i~~~~el~~~~~l~~  239 (246)
                      +|..|..++++++++++++++|||+.+|+.+|+++|+.++++.++..........+  +++++++.+  +..++.+
T Consensus       105 ~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~e--l~~~l~~  178 (181)
T PRK08942        105 KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLAD--LPQALKK  178 (181)
T ss_pred             CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHH--HHHHHHh
Confidence            99999999999999999999999999999999999999999988754433344456  899999988  5565543

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.92  E-value=9.8e-24  Score=153.66  Aligned_cols=124  Identities=19%  Similarity=0.292  Sum_probs=102.8

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCH---------------HHHHHHHHhcCCCCcceEEEecC-----------C
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPR---------------ENAELMISKLGLSDFFQVVILGD-----------E  159 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~---------------~~~~~~l~~~~l~~~f~~~~~~~-----------~  159 (246)
                      ...++||+.++|++|+++|++++|+||.+.               ..+...+.++++.  |+.++.+.           .
T Consensus        24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~  101 (176)
T TIGR00213        24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQV  101 (176)
T ss_pred             HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCC
Confidence            477899999999999999999999999974               3444566666766  77765542           3


Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCE-EEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPV-VGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~-i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                      ....||+|++|..+++++++++++++||||+.+|+++|+++|+.+ +++.++..........|+++++++.|+
T Consensus       102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el  174 (176)
T TIGR00213       102 CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL  174 (176)
T ss_pred             CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence            456899999999999999999999999999999999999999998 899988644333335699999999884

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK06769 hypothetical protein; Validated

Probab=99.91  E-value=3.8e-24  Score=154.94  Aligned_cols=126  Identities=17%  Similarity=0.224  Sum_probs=101.8

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHH--------HHHHHHHhcCCCCcceEEE-ecCCCCCCCCChHHHHHHHHH
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRE--------NAELMISKLGLSDFFQVVI-LGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~--------~~~~~l~~~~l~~~f~~~~-~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      ...++||+.++|++|++.|++++|+||.+..        .....++.+|+..+|.... .++..+..||+|+.|..++++
T Consensus        26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~  105 (173)
T PRK06769         26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK  105 (173)
T ss_pred             HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence            3668999999999999999999999998641        2344466777665544333 345557899999999999999


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh-------hhhhccCCcEEecCCCCh
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE-------HVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-------~~~~~~~~~~~i~~~~el  231 (246)
                      ++++|++|+||||+.+|+.+|+++|+.++++.++...       ..+....|+++++++.|+
T Consensus       106 l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el  167 (173)
T PRK06769        106 HGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA  167 (173)
T ss_pred             cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence            9999999999999999999999999999999987533       223345789999999883

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.91  E-value=1.5e-22  Score=150.89  Aligned_cols=141  Identities=13%  Similarity=0.054  Sum_probs=109.0

Q ss_pred             hhhhhHHH-HHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc---CCCCcceEEEecCCCCC
Q 025896           87 RGLKFCED-KEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL---GLSDFFQVVILGDECER  162 (246)
Q Consensus        87 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~  162 (246)
                      ....+-.. +...|... .....++||+.++|++|+++|++++|+||++...++..+++.   ++.++|+.++...  ..
T Consensus        74 ~lk~lqg~iw~~~Y~~~-~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~--~g  150 (220)
T TIGR01691        74 PLKTLQGLIWRQGYESG-ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTT--VG  150 (220)
T ss_pred             hHHHHHHHHHHHHHhcC-CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeC--cc
Confidence            33333333 44444432 235679999999999999999999999999998888888875   6777888776532  23


Q ss_pred             CCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhc-cCCcEEecCCCC
Q 025896          163 AKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE-ANPTFLIKDYDD  230 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~-~~~~~~i~~~~e  230 (246)
                      .||+|+.|..+++++|++|++++||||+..|+.+|+++|+.++++.++.+...... .....++.||++
T Consensus       151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~~~~~  219 (220)
T TIGR01691       151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFPDLNA  219 (220)
T ss_pred             cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeecCccc
Confidence            79999999999999999999999999999999999999999999988764421111 112457778765

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.90  E-value=1.1e-22  Score=151.92  Aligned_cols=105  Identities=17%  Similarity=0.152  Sum_probs=89.4

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCC----------ChHHHHHHHH
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKP----------FPDPYFKALE  175 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp----------~~~~~~~~~~  175 (246)
                      ...++||+.++|+.|+++|++++|+|++....++..++++|+..+|...+.+++.+..+|          ++..+..+++
T Consensus        78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~  157 (201)
T TIGR01491        78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR  157 (201)
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999888877666544433333          3367888999


Q ss_pred             HcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCC
Q 025896          176 MLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       176 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~  210 (246)
                      +++++++++++|||+.+|+++++.+|++++....+
T Consensus       158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~  192 (201)
T TIGR01491       158 ELNPSLTETVAVGDSKNDLPMFEVADISISLGDEG  192 (201)
T ss_pred             HhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCc
Confidence            99999999999999999999999999987665443

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.90  E-value=2.2e-22  Score=158.23  Aligned_cols=198  Identities=16%  Similarity=0.123  Sum_probs=132.1

Q ss_pred             ccCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHH-HhcCC-CHHHHHHHhCCCCchhhhhhHHHH
Q 025896           18 KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVE-NIAGK-HNIDIAKILFPDDLPRGLKFCEDK   95 (246)
Q Consensus        18 ~~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   95 (246)
                      ...++++|+|||||||+..     +.+..+.+..|.    ......... ...|. ...+.+...+..    .....   
T Consensus       106 ~~~~~~LvvfDmDGTLI~~-----e~i~eia~~~g~----~~~v~~it~~~m~Geldf~esl~~rv~~----l~g~~---  169 (322)
T PRK11133        106 HLRTPGLLVMDMDSTAIQI-----ECIDEIAKLAGT----GEEVAEVTERAMRGELDFEASLRQRVAT----LKGAD---  169 (322)
T ss_pred             cccCCCEEEEECCCCCcch-----HHHHHHHHHhCC----chHHHHHHHHHHcCCcCHHHHHHHHHHH----hCCCC---
Confidence            3467899999999999942     456666666643    222222222 22222 222222111110    00000   


Q ss_pred             HHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceE-------EEecC---CCCCCCC
Q 025896           96 EAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQV-------VILGD---ECERAKP  165 (246)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~-------~~~~~---~~~~~kp  165 (246)
                      ...+.. .....+++||+.++|+.|++.|++++|+|++.....+..++++++...+..       .+++.   +....+|
T Consensus       170 ~~il~~-v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~  248 (322)
T PRK11133        170 ANILQQ-VRENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQY  248 (322)
T ss_pred             HHHHHH-HHHhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCccc
Confidence            011111 123578999999999999999999999999998888888899998764432       22221   2234689


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      +++.++.+++++|+++++|++|||+.||++|++.+|+.+++     ++.+.....++++++...-.+++-+|
T Consensus       249 K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-----nAkp~Vk~~Ad~~i~~~~l~~~l~~~  315 (322)
T PRK11133        249 KADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-----HAKPKVNEQAQVTIRHADLMGVLCIL  315 (322)
T ss_pred             HHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-----CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence            99999999999999999999999999999999999998765     23444556889999855544455444

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.90  E-value=1.1e-23  Score=153.67  Aligned_cols=164  Identities=17%  Similarity=0.157  Sum_probs=115.0

Q ss_pred             eEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCch----HHHHHHhcC--CCHHH----HHHHhCCC-CchhhhhhH
Q 025896           24 AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITE----DFFVENIAG--KHNID----IAKILFPD-DLPRGLKFC   92 (246)
Q Consensus        24 ~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~----~~~~~~~~-~~~~~~~~~   92 (246)
                      +|+||+||||+|+...+..++..+++..+.. ...+..    ..+.....|  .....    .+..+... +......  
T Consensus         1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--   77 (175)
T TIGR01493         1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAF-SDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAEPK--   77 (175)
T ss_pred             CeEEecCCcCcccHHHHHHHHHHhhhhhhHH-HHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCCHH--
Confidence            5899999999999988888888777665210 000011    111111222  11111    12222111 1110011  


Q ss_pred             HHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHH
Q 025896           93 EDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFK  172 (246)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~  172 (246)
                        ....+.... ....++||+.++|+       +++|+||++...+...++++++..+|+.++++++.+..||+|+.|+.
T Consensus        78 --~~~~~~~~~-~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~  147 (175)
T TIGR01493        78 --YGERLRDAY-KNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYEL  147 (175)
T ss_pred             --HHHHHHHHH-hcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHH
Confidence              112222222 25779999999998       37899999999999999999999999999999988999999999999


Q ss_pred             HHHHcCCCCCcEEEEecChhhhHHHHhc
Q 025896          173 ALEMLKVSKDHTFVFEDSVSGIKAGVAA  200 (246)
Q Consensus       173 ~~~~~~~~~~~~~~igD~~~Di~~a~~~  200 (246)
                      +++++|++|++|+||||+..|+.+|+++
T Consensus       148 ~~~~~~~~p~~~l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       148 VFDTVGLPPDRVLMVAAHQWDLIGARKF  175 (175)
T ss_pred             HHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence            9999999999999999999999999864

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.89  E-value=4.1e-22  Score=150.33  Aligned_cols=196  Identities=12%  Similarity=0.129  Sum_probs=127.5

Q ss_pred             ceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHH-HHhcCC-CHHHHHHHhCCC-CchhhhhhHHHHHHHH
Q 025896           23 EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFV-ENIAGK-HNIDIAKILFPD-DLPRGLKFCEDKEAMF   99 (246)
Q Consensus        23 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   99 (246)
                      ++|+|||||||++++...     .+++.++    . ....... ....|. ...+.+...+.. .....        +.+
T Consensus         4 ~~vifDfDgTi~~~d~~~-----~~~~~~~----~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~--------~~~   65 (219)
T PRK09552          4 IQIFCDFDGTITNNDNII-----AIMKKFA----P-PEWEELKDDILSQELSIQEGVGQMFQLLPSNLK--------EEI   65 (219)
T ss_pred             cEEEEcCCCCCCcchhhH-----HHHHHhC----H-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCch--------HHH
Confidence            489999999999988653     2344442    1 1122222 222232 233444444333 11111        111


Q ss_pred             HHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC--cc--eEEEecCCCCCCCCChHH------
Q 025896          100 RKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD--FF--QVVILGDECERAKPFPDP------  169 (246)
Q Consensus       100 ~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~--~f--~~~~~~~~~~~~kp~~~~------  169 (246)
                      .+.......++||+.++|+.|+++|++++|+|++....++..++++ +..  ++  +..+.++.....||+|..      
T Consensus        66 ~~~~~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~  144 (219)
T PRK09552         66 IQFLLETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNH  144 (219)
T ss_pred             HHHHHhCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCcccccccc
Confidence            1222245789999999999999999999999999999999999987 643  33  444555555666776653      


Q ss_pred             ----HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhhh
Q 025896          170 ----YFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       170 ----~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                          ...++++++..++++++|||+.+|+.+|+.+|+.++  .............+.+.++++.|  +...++.+.
T Consensus       145 ~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a--~~~l~~~~~~~~~~~~~~~~f~e--i~~~l~~~~  216 (219)
T PRK09552        145 CGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA--RDFLITKCEELGIPYTPFETFHD--VQTELKHLL  216 (219)
T ss_pred             CCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee--HHHHHHHHHHcCCCccccCCHHH--HHHHHHHHh
Confidence                357889999999999999999999999999999433  21111111123457788899999  655565543

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.88  E-value=1.7e-22  Score=142.71  Aligned_cols=103  Identities=24%  Similarity=0.306  Sum_probs=86.8

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCH---------------HHHHHHHHhcCCCCcceEEEe----cCCCCCCCCCh
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPR---------------ENAELMISKLGLSDFFQVVIL----GDECERAKPFP  167 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~---------------~~~~~~l~~~~l~~~f~~~~~----~~~~~~~kp~~  167 (246)
                      .+++||+.++|+.|+++|++++|+||.+.               ..+...++++++... ..++.    ++..+..||+|
T Consensus        26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~~~~~KP~~  104 (147)
T TIGR01656        26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPADNCSCRKPKP  104 (147)
T ss_pred             eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCCCCCCCCCCCH
Confidence            56899999999999999999999999873               456677888888621 11221    34456679999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCC
Q 025896          168 DPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~  210 (246)
                      ++++.+++++++++++|++|||+..|+++|+++|+.++++.+|
T Consensus       105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~  147 (147)
T TIGR01656       105 GLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG  147 (147)
T ss_pred             HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence            9999999999999999999999999999999999999999764

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.88  E-value=3.4e-21  Score=144.68  Aligned_cols=148  Identities=16%  Similarity=0.117  Sum_probs=110.5

Q ss_pred             eEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHHHHh
Q 025896           24 AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLA  103 (246)
Q Consensus        24 ~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (246)
                      +|+||+||||+|+....         .+|.+   ..+...+ ..+.|....+.+.                      ...
T Consensus        65 aViFDlDgTLlDSs~~~---------~~G~~---~~s~~~~-~~l~g~~~w~~~~----------------------~~~  109 (237)
T TIGR01672        65 AVSFDIDDTVLFSSPGF---------WRGKK---TFSPGSE-DYLKNQVFWEKVN----------------------NGW  109 (237)
T ss_pred             EEEEeCCCccccCcHHH---------hCCcc---cCCHHHh-hhhcChHHHHHHH----------------------Hhc
Confidence            99999999999998765         15332   1233322 2333332222221                      112


Q ss_pred             hccCCCcccHHHHHHHHHHcCCeEEEEeCC----CHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          104 SEQLKPISGLDKVKKWIEDRGLKRAAVTNA----PRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       104 ~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~----~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      .....+++++.++|++++++|++++++||.    ........++++|+.++|+.+++++.....||++.   .+++++++
T Consensus       110 ~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i  186 (237)
T TIGR01672       110 DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI  186 (237)
T ss_pred             ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCC
Confidence            234677788999999999999999999998    55678888889999999999988887766677654   45667666


Q ss_pred             CCCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh
Q 025896          180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE  213 (246)
Q Consensus       180 ~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~  213 (246)
                          ++||||+.+|+.+|+++|+.++.+.++.+.
T Consensus       187 ----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s  216 (237)
T TIGR01672       187 ----RIHYGDSDNDITAAKEAGARGIRILRASNS  216 (237)
T ss_pred             ----eEEEeCCHHHHHHHHHCCCCEEEEEecCCC
Confidence                799999999999999999999999988543

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.88  E-value=1e-22  Score=145.67  Aligned_cols=111  Identities=14%  Similarity=0.107  Sum_probs=98.1

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHhcCCC---------CcceEEEecCCCCCCCCChHHHHHHH
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNA-PRENAELMISKLGLS---------DFFQVVILGDECERAKPFPDPYFKAL  174 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~-~~~~~~~~l~~~~l~---------~~f~~~~~~~~~~~~kp~~~~~~~~~  174 (246)
                      ....++||+.++|+.|+++|++++|+||+ ....++..+..+++.         ++|+.+++++.....||.+..++.+.
T Consensus        42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~  121 (174)
T TIGR01685        42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN  121 (174)
T ss_pred             CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence            35789999999999999999999999998 888889999999998         99999999987666677777777777


Q ss_pred             HHc--CCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhh
Q 025896          175 EML--KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHV  215 (246)
Q Consensus       175 ~~~--~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~  215 (246)
                      +.+  +++|++|+||||+..|+.+|+++|+.++++.++....+
T Consensus       122 ~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~~~~  164 (174)
T TIGR01685       122 KVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMDKGT  164 (174)
T ss_pred             hcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCccHHH
Confidence            777  89999999999999999999999999999988754433

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.88  E-value=2.5e-21  Score=144.91  Aligned_cols=130  Identities=20%  Similarity=0.304  Sum_probs=97.6

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCC----CCCCCCChHHHHHHHHHcCCC
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDE----CERAKPFPDPYFKALEMLKVS  180 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~----~~~~kp~~~~~~~~~~~~~~~  180 (246)
                      ...+++||+.++|+.|+++ ++++|+|++....++..++++|+..+|...+..++    .+..+++|.....+++.++..
T Consensus        65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~  143 (205)
T PRK13582         65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSL  143 (205)
T ss_pred             HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHh
Confidence            3578899999999999999 99999999999999999999999888865443321    122234455566777777777


Q ss_pred             CCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcE-EecCCCChhhHHHHhhhh
Q 025896          181 KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTF-LIKDYDDPKLWSALEELD  241 (246)
Q Consensus       181 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~-~i~~~~el~~~~~l~~~~  241 (246)
                      ++++++|||+.+|+.+++.+|+.+. +..   ........+++ +++++.+  ++.+++...
T Consensus       144 ~~~~v~iGDs~~D~~~~~aa~~~v~-~~~---~~~~~~~~~~~~~~~~~~e--l~~~l~~~~  199 (205)
T PRK13582        144 GYRVIAAGDSYNDTTMLGEADAGIL-FRP---PANVIAEFPQFPAVHTYDE--LLAAIDKAS  199 (205)
T ss_pred             CCeEEEEeCCHHHHHHHHhCCCCEE-ECC---CHHHHHhCCcccccCCHHH--HHHHHHHHH
Confidence            8999999999999999999998654 322   12222234555 8999998  666666544

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.87  E-value=2.7e-21  Score=134.47  Aligned_cols=98  Identities=18%  Similarity=0.297  Sum_probs=87.2

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCC--------HHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHc-
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAP--------RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEML-  177 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~-  177 (246)
                      ..++|++.++|++|++.|++++++||..        ...++..++++++.  ++..+.+.  ...||+++.|+.+++++ 
T Consensus        24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~~KP~~~~~~~~~~~~~   99 (132)
T TIGR01662        24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HCRKPKPGMFLEALKRFN   99 (132)
T ss_pred             heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CCCCCChHHHHHHHHHcC
Confidence            5688999999999999999999999998        77889999999986  44444444  57799999999999999 


Q ss_pred             CCCCCcEEEEec-ChhhhHHHHhcCCCEEEEc
Q 025896          178 KVSKDHTFVFED-SVSGIKAGVAAGLPVVGLT  208 (246)
Q Consensus       178 ~~~~~~~~~igD-~~~Di~~a~~~G~~~i~v~  208 (246)
                      +++|++++|||| +.+|+.+|+.+|+.+|+++
T Consensus       100 ~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~  131 (132)
T TIGR01662       100 EIDPEESVYVGDQDLTDLQAAKRAGLAFILVA  131 (132)
T ss_pred             CCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence            599999999999 6899999999999999984

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.87  E-value=2e-21  Score=138.38  Aligned_cols=103  Identities=18%  Similarity=0.230  Sum_probs=92.1

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCC---------------HHHHHHHHHhcCCCCcceEEE-e----cCCCCCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAP---------------RENAELMISKLGLSDFFQVVI-L----GDECERAKP  165 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~---------------~~~~~~~l~~~~l~~~f~~~~-~----~~~~~~~kp  165 (246)
                      .++++||+.++|++|+++|++++|+||.+               ...+...++.+|+.  |+.++ +    +++....||
T Consensus        27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP  104 (161)
T TIGR01261        27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKP  104 (161)
T ss_pred             HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCC
Confidence            47889999999999999999999999963               45677888999997  77665 4    467788999


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCC
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~  210 (246)
                      ++..+..+++++++++++++||||+.+|+.+|+++|++++++.++
T Consensus       105 ~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~  149 (161)
T TIGR01261       105 KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEE  149 (161)
T ss_pred             CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence            999999999999999999999999999999999999999999766

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.85  E-value=1.7e-20  Score=134.03  Aligned_cols=196  Identities=19%  Similarity=0.227  Sum_probs=134.5

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHH-----HHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-CchhhhhhHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREM-----LQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-DLPRGLKFCE   93 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   93 (246)
                      +++++++||+|.||+.....+..+.++-     .+++|+.    -+.........-+.+...+..+... ......++. 
T Consensus        13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~----~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~-   87 (244)
T KOG3109|consen   13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGIS----EEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYH-   87 (244)
T ss_pred             ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCC----hhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHH-
Confidence            3789999999999999887776666533     3445443    2211111110001111111222111 111122222 


Q ss_pred             HHHHHHHHHh-hccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCC------CCCCC
Q 025896           94 DKEAMFRKLA-SEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECE------RAKPF  166 (246)
Q Consensus        94 ~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~kp~  166 (246)
                         .+..... .+.++|.+-.+.+|-.|+..+  .++.||++...+.+.|.++|+.++|+++++.+...      ..||.
T Consensus        88 ---~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~  162 (244)
T KOG3109|consen   88 ---RFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPS  162 (244)
T ss_pred             ---HHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCC
Confidence               2222211 134788888999999999864  89999999999999999999999999999876554      47999


Q ss_pred             hHHHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCC
Q 025896          167 PDPYFKALEMLKVS-KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD  230 (246)
Q Consensus       167 ~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~e  230 (246)
                      +.+|+.+.+..|+. |++++||+||.++|+.|++.|++++++......     ..+++++.+...
T Consensus       163 ~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~-----~~~d~~l~~ih~  222 (244)
T KOG3109|consen  163 EEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKI-----KGVDYALEQIHN  222 (244)
T ss_pred             HHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecc-----cchHHHHHHhhc
Confidence            99999999999998 999999999999999999999999999665422     244555555444

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.84  E-value=7.9e-20  Score=131.07  Aligned_cols=97  Identities=19%  Similarity=0.182  Sum_probs=84.3

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHH------------HHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHH
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRE------------NAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~------------~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      ++||+.++|++|++.|++++|+||.+..            .+...++++|+.  ++.+++++.....||+|..+..++++
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~~KP~p~~~~~~~~~  120 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLYRKPMTGMWEYLQSQ  120 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCCCCCccHHHHHHHHH
Confidence            6899999999999999999999998653            467788999985  35666666666789999999999999


Q ss_pred             cC--CCCCcEEEEecCh--------hhhHHHHhcCCCEEEE
Q 025896          177 LK--VSKDHTFVFEDSV--------SGIKAGVAAGLPVVGL  207 (246)
Q Consensus       177 ~~--~~~~~~~~igD~~--------~Di~~a~~~G~~~i~v  207 (246)
                      ++  +++++++||||+.        +|+++|+++|+.+++-
T Consensus       121 ~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~~  161 (166)
T TIGR01664       121 YNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKYP  161 (166)
T ss_pred             cCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCCh
Confidence            99  9999999999996        6999999999988653

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.83  E-value=1.5e-19  Score=135.83  Aligned_cols=130  Identities=14%  Similarity=0.091  Sum_probs=94.6

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc---eEEEecCCCCCCCCChHHH----------HH
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF---QVVILGDECERAKPFPDPY----------FK  172 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~~~kp~~~~~----------~~  172 (246)
                      ..+++||+.++|+.|+++|++++|+|++....++.+++.++....+   +..+.++.....+|++..+          ..
T Consensus        68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~  147 (214)
T TIGR03333        68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS  147 (214)
T ss_pred             cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence            4789999999999999999999999999999999999887544333   3444444445566766543          46


Q ss_pred             HHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhh
Q 025896          173 ALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       173 ~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      ++++++..++++++|||+.+|+.+|+.+|+  +++.............+...++++.|  +...|++
T Consensus       148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~d--i~~~l~~  210 (214)
T TIGR03333       148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFYD--VRKELEN  210 (214)
T ss_pred             HHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHHH--HHHHHHH
Confidence            777777788999999999999999999997  44433211111222346666788888  5555544

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.82  E-value=1.3e-19  Score=128.78  Aligned_cols=113  Identities=16%  Similarity=0.149  Sum_probs=95.3

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      .+++|+++|++++|+||.+.......++++|+..+|+.         .+|+++.+..+++++++++++|+||||+.+|+.
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~  106 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG---------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWP  106 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec---------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence            79999999999999999999999999999999877763         268899999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChh-hHHHHhhhh
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPK-LWSALEELD  241 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~-~~~~l~~~~  241 (246)
                      +++.+|++ +.+....   +.....+++++.+..+-+ +..+++.+.
T Consensus       107 ~~~~ag~~-~~v~~~~---~~~~~~a~~i~~~~~~~g~~~~~~~~~~  149 (154)
T TIGR01670       107 VMEKVGLS-VAVADAH---PLLIPRADYVTRIAGGRGAVREVCELLL  149 (154)
T ss_pred             HHHHCCCe-EecCCcC---HHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence            99999997 5554433   234567899999887655 777766654

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.82  E-value=1.3e-19  Score=129.57  Aligned_cols=105  Identities=14%  Similarity=0.147  Sum_probs=90.4

Q ss_pred             HHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhh
Q 025896          115 KVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI  194 (246)
Q Consensus       115 ~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di  194 (246)
                      .-++.|++.|++++|+|+.....++..++++++..+|+.         .||+|..++.++++++++++++++|||+.||+
T Consensus        41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~---------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi  111 (169)
T TIGR02726        41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG---------IKKKTEPYAQMLEEMNISDAEVCYVGDDLVDL  111 (169)
T ss_pred             HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec---------CCCCHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence            456778899999999999999999999999999988873         27899999999999999999999999999999


Q ss_pred             HHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChh
Q 025896          195 KAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPK  232 (246)
Q Consensus       195 ~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~  232 (246)
                      .+++.+|+++++.    ++.+.....+++++.+..+-+
T Consensus       112 ~~~~~ag~~~am~----nA~~~lk~~A~~I~~~~~~~g  145 (169)
T TIGR02726       112 SMMKRVGLAVAVG----DAVADVKEAAAYVTTARGGHG  145 (169)
T ss_pred             HHHHHCCCeEECc----CchHHHHHhCCEEcCCCCCCC
Confidence            9999999987777    444455567888887666544

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.82  E-value=1.7e-19  Score=126.25  Aligned_cols=103  Identities=31%  Similarity=0.481  Sum_probs=93.8

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCC----------------CCChH
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERA----------------KPFPD  168 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------------kp~~~  168 (246)
                      ....+++++.++|++|+++|++++++|++....++..++++++..+++.++.+......                ||++.
T Consensus        21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (139)
T cd01427          21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD  100 (139)
T ss_pred             ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence            45889999999999999999999999999999999999999998888888877655444                99999


Q ss_pred             HHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          169 PYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      .+..++++++..++++++|||+.+|+.+++.+|+.++++
T Consensus       101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427         101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence            999999999999999999999999999999999998864

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.82  E-value=4.6e-19  Score=130.88  Aligned_cols=95  Identities=13%  Similarity=0.158  Sum_probs=80.1

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCC--------------------CCCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDE--------------------CERAKP  165 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~--------------------~~~~kp  165 (246)
                      ..+++||+.++|+.|++.|++++|+|++....++..++++++.++|+.+++++.                    ...+.+
T Consensus        70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~  149 (188)
T TIGR01489        70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC  149 (188)
T ss_pred             hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence            378999999999999999999999999999999999999999999999886532                    122334


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCC
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLP  203 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~  203 (246)
                      ++..++++.+.+   +++++||||+.+|+++|+.+++-
T Consensus       150 K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~  184 (188)
T TIGR01489       150 KGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV  184 (188)
T ss_pred             HHHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence            566777776654   89999999999999999999753

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.82  E-value=3.9e-19  Score=131.57  Aligned_cols=124  Identities=18%  Similarity=0.257  Sum_probs=90.0

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEE--------EecCCCCCCCCChHHHHHHHHHc
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVV--------ILGDECERAKPFPDPYFKALEML  177 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~--------~~~~~~~~~kp~~~~~~~~~~~~  177 (246)
                      .++++||+.++|+.+++.+ +++|+|++....+..+++++|+..+|...        +++... ..++.+......+++.
T Consensus        66 ~i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~l~~~  143 (203)
T TIGR02137        66 TLKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVIAFKSL  143 (203)
T ss_pred             hCCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHHHHHhh
Confidence            4789999999999999985 99999999999999999999999888532        222211 2334443333344554


Q ss_pred             CCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcE-EecCCCChhhHHHHhhh
Q 025896          178 KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTF-LIKDYDDPKLWSALEEL  240 (246)
Q Consensus       178 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~-~i~~~~el~~~~~l~~~  240 (246)
                      +   .++++|||+.||+.|++.+|.++++..    .+......+++ ++.+.+|  +...+.+.
T Consensus       144 ~---~~~v~vGDs~nDl~ml~~Ag~~ia~~a----k~~~~~~~~~~~~~~~~~~--~~~~~~~~  198 (203)
T TIGR02137       144 Y---YRVIAAGDSYNDTTMLSEAHAGILFHA----PENVIREFPQFPAVHTYED--LKREFLKA  198 (203)
T ss_pred             C---CCEEEEeCCHHHHHHHHhCCCCEEecC----CHHHHHhCCCCCcccCHHH--HHHHHHHH
Confidence            4   379999999999999999999988873    33333344555 6777777  55555543

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.79  E-value=3.7e-18  Score=126.90  Aligned_cols=101  Identities=17%  Similarity=0.190  Sum_probs=86.2

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCC-------CC---CCCCChHHHHHHHHH
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDE-------CE---RAKPFPDPYFKALEM  176 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~-------~~---~~kp~~~~~~~~~~~  176 (246)
                      .+++||+.++++.+++.|++++|+|++.....+.+.+++|++..+...+..++       .+   .+.-+...++.++++
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~  155 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE  155 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence            88999999999999999999999999999999999999999887755554443       11   123356778899999


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      +|+++++++++|||.||+.|.+.+|.+.+.-
T Consensus       156 ~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n  186 (212)
T COG0560         156 LGIPLEETVAYGDSANDLPMLEAAGLPIAVN  186 (212)
T ss_pred             cCCCHHHeEEEcCchhhHHHHHhCCCCeEeC
Confidence            9999999999999999999999999875544

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.79  E-value=7.9e-20  Score=140.65  Aligned_cols=123  Identities=11%  Similarity=0.115  Sum_probs=100.4

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC---CCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC---ERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~---~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      .++++.+.++.|++.+++++++||.+.......+..+|+..+|+.+..+...   ..+||+|.+|+.++++++++|++++
T Consensus       121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~  200 (257)
T TIGR01458       121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAV  200 (257)
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEE
Confidence            3677888899999988999999998877666666667777778766544332   2379999999999999999999999


Q ss_pred             EEecCh-hhhHHHHhcCCCEEEEcCCC-Chh--hhhccCCcEEecCCCCh
Q 025896          186 VFEDSV-SGIKAGVAAGLPVVGLTTRN-PEH--VLLEANPTFLIKDYDDP  231 (246)
Q Consensus       186 ~igD~~-~Di~~a~~~G~~~i~v~~~~-~~~--~~~~~~~~~~i~~~~el  231 (246)
                      ||||+. +|+.+|+.+|+.++++.+|. ...  +.....|+++++++.|+
T Consensus       201 ~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el  250 (257)
T TIGR01458       201 MIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA  250 (257)
T ss_pred             EECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence            999997 99999999999999999884 322  23345799999999984

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.79  E-value=1.3e-19  Score=141.46  Aligned_cols=121  Identities=15%  Similarity=0.141  Sum_probs=93.0

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHH-HHHHhcCCCCcceEEEe---cCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAE-LMISKLGLSDFFQVVIL---GDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~-~~l~~~~l~~~f~~~~~---~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      .++++.++++.|++.|. +.|+||.+..... ..+...+...+|+.+..   .+....+||+|..+..++++++++|+++
T Consensus       144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~  222 (279)
T TIGR01452       144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART  222 (279)
T ss_pred             CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence            37889999999998887 7889998754321 12223345455554432   3344578999999999999999999999


Q ss_pred             EEEecCh-hhhHHHHhcCCCEEEEcCCCC-hhhhhc--------cCCcEEecCCCC
Q 025896          185 FVFEDSV-SGIKAGVAAGLPVVGLTTRNP-EHVLLE--------ANPTFLIKDYDD  230 (246)
Q Consensus       185 ~~igD~~-~Di~~a~~~G~~~i~v~~~~~-~~~~~~--------~~~~~~i~~~~e  230 (246)
                      +||||+. .|+.+|+++|+.+++|.+|.. ..+...        ..|+++++++.|
T Consensus       223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~  278 (279)
T TIGR01452       223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLAD  278 (279)
T ss_pred             EEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEeccccc
Confidence            9999996 999999999999999999943 333321        469999999987

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.78  E-value=5.8e-18  Score=122.32  Aligned_cols=99  Identities=15%  Similarity=0.161  Sum_probs=84.7

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAP-RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ..++|++.++|++|++.|++++|+||.+ .......++.+++..++         ...||+|..|..+++++++++++++
T Consensus        42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~~KP~p~~~~~~l~~~~~~~~~~l  112 (170)
T TIGR01668        42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HAVKPPGCAFRRAHPEMGLTSEQVA  112 (170)
T ss_pred             CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CCCCCChHHHHHHHHHcCCCHHHEE
Confidence            4567889999999999999999999998 56666777777764221         3479999999999999999999999


Q ss_pred             EEecCh-hhhHHHHhcCCCEEEEcCCCChh
Q 025896          186 VFEDSV-SGIKAGVAAGLPVVGLTTRNPEH  214 (246)
Q Consensus       186 ~igD~~-~Di~~a~~~G~~~i~v~~~~~~~  214 (246)
                      +|||+. .|+.+|+++|+.++++.++....
T Consensus       113 ~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~  142 (170)
T TIGR01668       113 VVGDRLFTDVMGGNRNGSYTILVEPLVHPD  142 (170)
T ss_pred             EECCcchHHHHHHHHcCCeEEEEccCcCCc
Confidence            999998 79999999999999998886443

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.77  E-value=1.5e-17  Score=124.10  Aligned_cols=101  Identities=12%  Similarity=0.137  Sum_probs=83.6

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceE-EEecCC----------CCCCCCChHHHHHHHH
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQV-VILGDE----------CERAKPFPDPYFKALE  175 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~-~~~~~~----------~~~~kp~~~~~~~~~~  175 (246)
                      ..++|++.++++.++++|++++|+|++....++.+++++|+..+|.. +...++          ...++++...++.+++
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~  165 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA  165 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999887754 222111          1223455667888899


Q ss_pred             HcCCCCCcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          176 MLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       176 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      +.+++++++++|||+.+|+++++.+|.+++..
T Consensus       166 ~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~  197 (202)
T TIGR01490       166 EEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN  197 (202)
T ss_pred             HcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence            99999999999999999999999999876544

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.77  E-value=8.9e-18  Score=132.99  Aligned_cols=103  Identities=18%  Similarity=0.261  Sum_probs=89.0

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCC---------------CHHHHHHHHHhcCCCCcceEEEec-----CCCCCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNA---------------PRENAELMISKLGLSDFFQVVILG-----DECERAKP  165 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~---------------~~~~~~~~l~~~~l~~~f~~~~~~-----~~~~~~kp  165 (246)
                      ...++||+.++|++|+++|++++|+||.               ....+...++.+++.  |+.++.+     ++....||
T Consensus        28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP  105 (354)
T PRK05446         28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKP  105 (354)
T ss_pred             cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCC
Confidence            4789999999999999999999999995               234566677888884  6666533     45578899


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCC
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~  210 (246)
                      +|.++..+++++++.+++++||||+.+|+.+|+.+|+++|+++..
T Consensus       106 ~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~  150 (354)
T PRK05446        106 KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARE  150 (354)
T ss_pred             CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence            999999999999999999999999999999999999999999654

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.76  E-value=9.9e-18  Score=126.33  Aligned_cols=90  Identities=22%  Similarity=0.327  Sum_probs=79.0

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV  186 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  186 (246)
                      .+++|++.++|++|++.|++++++|+.+........+.+|+.+   ..+.+...  +||++..+..+++.+++++++|+|
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~---~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~  200 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD---SIVFARVI--GKPEPKIFLRIIKELQVKPGEVAM  200 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS---EEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred             CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc---cccccccc--ccccchhHHHHHHHHhcCCCEEEE
Confidence            3678999999999999999999999999999999999999943   22222211  689988999999999999999999


Q ss_pred             EecChhhhHHHHhcC
Q 025896          187 FEDSVSGIKAGVAAG  201 (246)
Q Consensus       187 igD~~~Di~~a~~~G  201 (246)
                      |||+.||+.|+++||
T Consensus       201 vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  201 VGDGVNDAPALKAAG  215 (215)
T ss_dssp             EESSGGHHHHHHHSS
T ss_pred             EccCHHHHHHHHhCc
Confidence            999999999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.75  E-value=5.1e-17  Score=118.76  Aligned_cols=96  Identities=21%  Similarity=0.244  Sum_probs=79.2

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCC------------CCCCCCChHHHHH
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDE------------CERAKPFPDPYFK  172 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~------------~~~~kp~~~~~~~  172 (246)
                      ..+.++||+.++++.++++|++++|+|++....++..++++|+..+|...+..++            ......++..++.
T Consensus        70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~  149 (177)
T TIGR01488        70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKE  149 (177)
T ss_pred             hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHH
Confidence            4577899999999999999999999999999999999999999877755443321            1123345667888


Q ss_pred             HHHHcCCCCCcEEEEecChhhhHHHHhc
Q 025896          173 ALEMLKVSKDHTFVFEDSVSGIKAGVAA  200 (246)
Q Consensus       173 ~~~~~~~~~~~~~~igD~~~Di~~a~~~  200 (246)
                      ++++++++++++++|||+.+|+++++.+
T Consensus       150 ~~~~~~~~~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       150 LLEESKITLKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             HHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence            8888899999999999999999998764

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.75  E-value=9.6e-18  Score=115.35  Aligned_cols=88  Identities=11%  Similarity=0.120  Sum_probs=78.3

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHhcC-------CCCcceEEEecCCCCCCCCChHHHHHHHHHcC-
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNA-PRENAELMISKLG-------LSDFFQVVILGDECERAKPFPDPYFKALEMLK-  178 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~-~~~~~~~~l~~~~-------l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~-  178 (246)
                      +++||+.++|++|+++|++++++||. ........++.++       +.++|+.+++++    .+|+|+.+..+++++| 
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~----~~pkp~~~~~a~~~lg~  104 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY----WLPKSPRLVEIALKLNG  104 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC----CCcHHHHHHHHHHHhcC
Confidence            68899999999999999999999999 7888888888888       788888887665    3588999999999999 


Q ss_pred             -CCCCcEEEEecChhhhHHHHh
Q 025896          179 -VSKDHTFVFEDSVSGIKAGVA  199 (246)
Q Consensus       179 -~~~~~~~~igD~~~Di~~a~~  199 (246)
                       +.|++|+||||+..|+...+.
T Consensus       105 ~~~p~~~l~igDs~~n~~~~~~  126 (128)
T TIGR01681       105 VLKPKSILFVDDRPDNNEEVDY  126 (128)
T ss_pred             CCCcceEEEECCCHhHHHHHHh
Confidence             999999999999999877654

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.74  E-value=1.8e-17  Score=121.15  Aligned_cols=101  Identities=17%  Similarity=0.218  Sum_probs=84.3

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      .++.|+++|++++|+|+.....+...++.+|+..+|++         .++++..++.+++++|+++++++||||+.+|+.
T Consensus        56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g---------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~  126 (183)
T PRK09484         56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQG---------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWP  126 (183)
T ss_pred             HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecC---------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence            56777889999999999999999999999998876651         356789999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCC
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYD  229 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~  229 (246)
                      +++.+|+.++ +.   +..+.....++++++...
T Consensus       127 ~a~~aG~~~~-v~---~~~~~~~~~a~~v~~~~~  156 (183)
T PRK09484        127 VMEKVGLSVA-VA---DAHPLLLPRADYVTRIAG  156 (183)
T ss_pred             HHHHCCCeEe-cC---ChhHHHHHhCCEEecCCC
Confidence            9999999854 42   344455567899997433

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=99.74  E-value=1.2e-17  Score=130.50  Aligned_cols=127  Identities=17%  Similarity=0.114  Sum_probs=85.5

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCH-----HHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPR-----ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~-----~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      ++++.++++.++..+..+.++++...     ...+...+.+++...+......+....+..++.+++.+++.+|++++++
T Consensus       139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~  218 (272)
T PRK10530        139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNV  218 (272)
T ss_pred             eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHe
Confidence            45666777777776666666665432     2233333444433111000011223344557789999999999999999


Q ss_pred             EEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          185 FVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ++|||+.||++|++.+|+.+++   ++..++. +..|++++.+..+-++...++++
T Consensus       219 i~~GD~~NDi~m~~~ag~~vam---gna~~~l-k~~Ad~v~~~n~~dGv~~~l~~~  270 (272)
T PRK10530        219 VAFGDNFNDISMLEAAGLGVAM---GNADDAV-KARADLVIGDNTTPSIAEFIYSH  270 (272)
T ss_pred             EEeCCChhhHHHHHhcCceEEe---cCchHHH-HHhCCEEEecCCCCcHHHHHHHH
Confidence            9999999999999999975443   3434444 56899999999999999888765

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.74  E-value=5.5e-17  Score=121.92  Aligned_cols=99  Identities=15%  Similarity=0.147  Sum_probs=81.2

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCC----HHHHHHHHHhcCC--CCcceEEEecCCCCCCCCChHHHHHHHHHcC
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAP----RENAELMISKLGL--SDFFQVVILGDECERAKPFPDPYFKALEMLK  178 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~----~~~~~~~l~~~~l--~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~  178 (246)
                      ....++||+.++|++|+++|++++++||+.    .......++.+|+  .++|+.+++++..  .||++.   ..+++++
T Consensus       111 ~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~---~~l~~~~  185 (237)
T PRK11009        111 EFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKT---QWLKKKN  185 (237)
T ss_pred             ccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHH---HHHHhcC
Confidence            457899999999999999999999999964    3456666677999  7889888877653  556553   3556666


Q ss_pred             CCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC
Q 025896          179 VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP  212 (246)
Q Consensus       179 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~  212 (246)
                      +    ++||||+.+|+.+|+++|+.++.+.++.+
T Consensus       186 i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~  215 (237)
T PRK11009        186 I----RIFYGDSDNDITAAREAGARGIRILRAAN  215 (237)
T ss_pred             C----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence            6    89999999999999999999999999854

>PRK10444 UMP phosphatase; Provisional

Probab=99.73  E-value=2e-18  Score=131.70  Aligned_cols=72  Identities=21%  Similarity=0.261  Sum_probs=62.5

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCCh-hhhh--ccCCcEEecCCCCh
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPE-HVLL--EANPTFLIKDYDDP  231 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~-~~~~--~~~~~~~i~~~~el  231 (246)
                      ...+||+|..+..+++++++++++++||||+. +|+.+|+.+|+.++++.+|... .+..  ...|+++++++.++
T Consensus       170 ~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el  245 (248)
T PRK10444        170 FYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI  245 (248)
T ss_pred             cccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence            34579999999999999999999999999998 8999999999999999998543 3332  25799999999885

>PRK11590 hypothetical protein; Provisional

Probab=99.73  E-value=9.8e-16  Score=114.83  Aligned_cols=175  Identities=13%  Similarity=0.026  Sum_probs=106.3

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHH-HHhcCCCCCCCchHHHHHHhcCCCHHHHHHH------------hCCCCchh
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREML-QEIGFNDGVPITEDFFVENIAGKHNIDIAKI------------LFPDDLPR   87 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~   87 (246)
                      +.|+++|||||||++.+  ....+...+ +++|+    ..........+.|.........            ........
T Consensus         5 ~~k~~iFD~DGTL~~~d--~~~~~~~~~~~~~g~----~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~   78 (211)
T PRK11590          5 ERRVVFFDLDGTLHQQD--MFGSFLRYLLRRQPL----NLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEAR   78 (211)
T ss_pred             cceEEEEecCCCCcccc--hHHHHHHHHHHhcch----hhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHH
Confidence            45799999999999444  445555555 77743    2222111222233332221111            11113333


Q ss_pred             hhhhHHHHHHHHHHHhhccCCCcccHHHHH-HHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecC--------
Q 025896           88 GLKFCEDKEAMFRKLASEQLKPISGLDKVK-KWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGD--------  158 (246)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~--------  158 (246)
                      .....+.+.+.+..    ...++||+.+.| +.+++.|++++|+|+.....++..++.+++.. .+.++++.        
T Consensus        79 ~~~~~~~f~~~~~~----~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~  153 (211)
T PRK11590         79 LQALEADFVRWFRD----NVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGW  153 (211)
T ss_pred             HHHHHHHHHHHHHH----hCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccE
Confidence            44444444443332    257799999999 56888999999999999999999999988522 22222221        


Q ss_pred             CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          159 ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       159 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      ..+...-..+-..++-+.++.+...+.+.|||.+|+++...+|-+ +.|
T Consensus       154 ~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~-~~v  201 (211)
T PRK11590        154 VLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHR-WRV  201 (211)
T ss_pred             ECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCC-EEE
Confidence            111111122334455555677778889999999999999999976 455

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.73  E-value=7.1e-17  Score=111.01  Aligned_cols=91  Identities=19%  Similarity=0.346  Sum_probs=81.7

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEe
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFE  188 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ig  188 (246)
                      ..|.+++.+.++++.|+++.|+||++......+.+++|+.    .+     ....||.+..++++++++++++++|+|||
T Consensus        47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi-----~~A~KP~~~~fr~Al~~m~l~~~~vvmVG  117 (175)
T COG2179          47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FI-----YRAKKPFGRAFRRALKEMNLPPEEVVMVG  117 (175)
T ss_pred             CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----ee-----ecccCccHHHHHHHHHHcCCChhHEEEEc
Confidence            3455678889999999999999999999999999999875    22     24689999999999999999999999999


Q ss_pred             cCh-hhhHHHHhcCCCEEEEc
Q 025896          189 DSV-SGIKAGVAAGLPVVGLT  208 (246)
Q Consensus       189 D~~-~Di~~a~~~G~~~i~v~  208 (246)
                      |.. .|+.++..+|+.+|+|.
T Consensus       118 DqL~TDVlggnr~G~~tIlV~  138 (175)
T COG2179         118 DQLFTDVLGGNRAGMRTILVE  138 (175)
T ss_pred             chhhhhhhcccccCcEEEEEE
Confidence            999 99999999999999994

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.72  E-value=8.4e-17  Score=127.34  Aligned_cols=105  Identities=15%  Similarity=0.052  Sum_probs=96.3

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC-cceEEEecC-------CCCCCCCChHHHHHHHHHc
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD-FFQVVILGD-------ECERAKPFPDPYFKALEML  177 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~-------~~~~~kp~~~~~~~~~~~~  177 (246)
                      ...++|++.++|++|++.|++++++|+.+....+..++.+++.. +|+.+++.+       +.+..||+|..+..+++++
T Consensus       185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~  264 (300)
T PHA02530        185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK  264 (300)
T ss_pred             cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999986 899888877       3456799999999999999


Q ss_pred             CC-CCCcEEEEecChhhhHHHHhcCCCEEEEcCC
Q 025896          178 KV-SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       178 ~~-~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~  210 (246)
                      +. .+++|++|||+.+|+.+|+++|+.++++.+|
T Consensus       265 ~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g  298 (300)
T PHA02530        265 IAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG  298 (300)
T ss_pred             hccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence            88 6799999999999999999999999999765

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=99.72  E-value=5.3e-18  Score=129.18  Aligned_cols=108  Identities=17%  Similarity=0.146  Sum_probs=79.6

Q ss_pred             EEEEeCCCHHHHHHHHHhcCCCCcceEEEe---cCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCC
Q 025896          127 RAAVTNAPRENAELMISKLGLSDFFQVVIL---GDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLP  203 (246)
Q Consensus       127 i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~---~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~  203 (246)
                      +.+.++.....+...+++++..  +..+.+   .+....+.+++..++.+++.+|++++++++|||+.||++|++.+|++
T Consensus       118 ~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~  195 (230)
T PRK01158        118 VALRRTVPVEEVRELLEELGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFG  195 (230)
T ss_pred             eeecccccHHHHHHHHHHcCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCce
Confidence            3444454555666677766532  222221   23335566788999999999999999999999999999999999988


Q ss_pred             EEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          204 VVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       204 ~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      +++-    +..+..+..+++++.+..+-++...++++
T Consensus       196 vam~----Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~  228 (230)
T PRK01158        196 VAVA----NADEELKEAADYVTEKSYGEGVAEAIEHL  228 (230)
T ss_pred             EEec----CccHHHHHhcceEecCCCcChHHHHHHHH
Confidence            7665    34445556789999999999999888765

>PLN02645 phosphoglycolate phosphatase

Probab=99.71  E-value=6.4e-18  Score=133.66  Aligned_cols=120  Identities=15%  Similarity=0.081  Sum_probs=85.7

Q ss_pred             HHHHHHcCCeEEEEeCCCHHH-HHHHHHhcCCCCcceEEEecCCC---CCCCCChHHHHHHHHHcCCCCCcEEEEecCh-
Q 025896          117 KKWIEDRGLKRAAVTNAPREN-AELMISKLGLSDFFQVVILGDEC---ERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-  191 (246)
Q Consensus       117 l~~l~~~g~~i~i~s~~~~~~-~~~~l~~~~l~~~f~~~~~~~~~---~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-  191 (246)
                      ...|++++-...|+||.+... ....+...|...+|+.+......   ..+||+|..|..+++++++++++++||||++ 
T Consensus       179 ~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~  258 (311)
T PLN02645        179 TLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLD  258 (311)
T ss_pred             HHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcH
Confidence            344444223467777776533 22223344555666666554432   2469999999999999999999999999998 


Q ss_pred             hhhHHHHhcCCCEEEEcCCCC-hhhhhc----cCCcEEecCCCChhhHHHHh
Q 025896          192 SGIKAGVAAGLPVVGLTTRNP-EHVLLE----ANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       192 ~Di~~a~~~G~~~i~v~~~~~-~~~~~~----~~~~~~i~~~~el~~~~~l~  238 (246)
                      +|+.+|+.+|+.+++|.+|.. ..+...    ..|+++++++.+  +..+++
T Consensus       259 ~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~--l~~~~~  308 (311)
T PLN02645        259 TDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISD--FLTLKA  308 (311)
T ss_pred             HHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHH--HHHHhh
Confidence            999999999999999998843 333322    579999999998  555443

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.69  E-value=5.1e-17  Score=124.62  Aligned_cols=119  Identities=18%  Similarity=0.201  Sum_probs=81.4

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHH--HH-HhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAEL--MI-SKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV  186 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~--~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  186 (246)
                      ++.....+..++ .|.+ .++||.+......  .. ..-.+...++...+.+....+||+|.+|+.++++++++++++++
T Consensus       123 y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~  200 (249)
T TIGR01457       123 YEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLM  200 (249)
T ss_pred             HHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEE
Confidence            344555555564 4565 6667765432211  00 00011122333334455567899999999999999999999999


Q ss_pred             EecCh-hhhHHHHhcCCCEEEEcCCCCh-hhhhc--cCCcEEecCCCC
Q 025896          187 FEDSV-SGIKAGVAAGLPVVGLTTRNPE-HVLLE--ANPTFLIKDYDD  230 (246)
Q Consensus       187 igD~~-~Di~~a~~~G~~~i~v~~~~~~-~~~~~--~~~~~~i~~~~e  230 (246)
                      |||+. +|+.+|+++|+.++++.+|... .+...  ..|+++++++.+
T Consensus       201 VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~  248 (249)
T TIGR01457       201 VGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAE  248 (249)
T ss_pred             ECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhh
Confidence            99997 8999999999999999998533 33322  478999999877

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=99.68  E-value=3.6e-15  Score=111.45  Aligned_cols=113  Identities=17%  Similarity=0.208  Sum_probs=86.7

Q ss_pred             ccCCCcccHHHHHHHH--HHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC---------------CC-C---
Q 025896          105 EQLKPISGLDKVKKWI--EDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC---------------ER-A---  163 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l--~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~---------------~~-~---  163 (246)
                      ..+++.||+.++++.+  ++.|+.+.|+|+++..+++.+|++.|+...|+.|++....               +. .   
T Consensus        68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~  147 (234)
T PF06888_consen   68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP  147 (234)
T ss_pred             HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence            4689999999999999  4579999999999999999999999999999888765210               00 1   


Q ss_pred             -CCChHHHHHHHHH---cCCCCCcEEEEecChhhhHHHHhcCCC-EEEEcCCCChhhhh
Q 025896          164 -KPFPDPYFKALEM---LKVSKDHTFVFEDSVSGIKAGVAAGLP-VVGLTTRNPEHVLL  217 (246)
Q Consensus       164 -kp~~~~~~~~~~~---~~~~~~~~~~igD~~~Di~~a~~~G~~-~i~v~~~~~~~~~~  217 (246)
                       .-|...+.++++.   .|+..++++||||+.||+-++...+-. .++.+.++.-....
T Consensus       148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i  206 (234)
T PF06888_consen  148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLI  206 (234)
T ss_pred             ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHH
Confidence             1134556666665   367789999999999999999987765 56666665444433

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.67  E-value=3.2e-15  Score=106.53  Aligned_cols=124  Identities=17%  Similarity=0.253  Sum_probs=98.6

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCC---------------HHHHHHHHHhcCCCCcceEEEecCC-----CCCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAP---------------RENAELMISKLGLSDFFQVVILGDE-----CERAKP  165 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~---------------~~~~~~~l~~~~l~~~f~~~~~~~~-----~~~~kp  165 (246)
                      ...+.||+.+.+..|++.|++++++||-+               ...+...|+..|+.  |+.++.+..     ...+||
T Consensus        29 ~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~--id~i~~Cph~p~~~c~cRKP  106 (181)
T COG0241          29 DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVK--IDGILYCPHHPEDNCDCRKP  106 (181)
T ss_pred             HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCc--cceEEECCCCCCCCCcccCC
Confidence            46788999999999999999999999942               12345566666764  888877643     467999


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                      ++.++..+++++++++++.++|||+..|+++|.++|++.+.+.++...........+++.+++.+.
T Consensus       107 ~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (181)
T COG0241         107 KPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEF  172 (181)
T ss_pred             ChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHH
Confidence            999999999999999999999999999999999999998888777433333323456677777763

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=99.66  E-value=2.3e-15  Score=114.58  Aligned_cols=71  Identities=27%  Similarity=0.379  Sum_probs=61.7

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCC-CChhhhh--ccCCcEEecCCCCh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTR-NPEHVLL--EANPTFLIKDYDDP  231 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~-~~~~~~~--~~~~~~~i~~~~el  231 (246)
                      ..+||++.+|+.+++.++..++++++|||++ +||.+|+++|+.+++|.+| +...+..  ...|+++++++.++
T Consensus       187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~  261 (269)
T COG0647         187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAEL  261 (269)
T ss_pred             ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHH
Confidence            3579999999999999999999999999999 8999999999999999999 3333322  35789999999983

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=99.63  E-value=2.2e-14  Score=99.86  Aligned_cols=121  Identities=12%  Similarity=0.132  Sum_probs=97.8

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc---CCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL---GLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKD  182 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~  182 (246)
                      +.++||++.+.|++.++.|.+++|+|+++...+..++.+.   .+..+|++.+...  ...|-....|.+++...|++|.
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtt--iG~KrE~~SY~kIa~~iGl~p~  178 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTT--IGKKRESQSYAKIAGDIGLPPA  178 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeecc--ccccccchhHHHHHHhcCCCch
Confidence            4679999999999999999999999999988888777654   4667777776542  2355677889999999999999


Q ss_pred             cEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCC
Q 025896          183 HTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYD  229 (246)
Q Consensus       183 ~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~  229 (246)
                      +++|+.|..+.+.+|+.+|+.++.+.++.+.... ......++.|+.
T Consensus       179 eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~-d~~~~~~~~sf~  224 (229)
T COG4229         179 EILFLSDNPEELKAAAGVGLATGLAVRPGNAPVP-DGQGFLVYKSFE  224 (229)
T ss_pred             heEEecCCHHHHHHHHhcchheeeeecCCCCCCC-CCcCceeeechh
Confidence            9999999999999999999999999887543321 133455666665

>TIGR01686 FkbH FkbH-like domain

Probab=99.62  E-value=3.8e-15  Score=118.43  Aligned_cols=91  Identities=12%  Similarity=0.105  Sum_probs=83.1

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHh----cCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISK----LGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~----~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      .+++|+.++|+.|++.|+.++|+|+++...+...+++    +++.++|+.+..+     .||++..+..+++++++.+++
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i~~~~  105 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNLGTDS  105 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCCCcCc
Confidence            3588999999999999999999999999999999999    8888889887544     579999999999999999999


Q ss_pred             EEEEecChhhhHHHHhcCCC
Q 025896          184 TFVFEDSVSGIKAGVAAGLP  203 (246)
Q Consensus       184 ~~~igD~~~Di~~a~~~G~~  203 (246)
                      ++||||+..|+.+++.++-.
T Consensus       106 ~vfidD~~~d~~~~~~~lp~  125 (320)
T TIGR01686       106 FLFIDDNPAERANVKITLPV  125 (320)
T ss_pred             EEEECCCHHHHHHHHHHCCC
Confidence            99999999999999997654

The C-terminal portion of this domain is unique to this family (by BLAST).

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=99.61  E-value=1.1e-15  Score=119.32  Aligned_cols=81  Identities=11%  Similarity=-0.033  Sum_probs=67.5

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcE--EecCCCChhhHHHH
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTF--LIKDYDDPKLWSAL  237 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~--~i~~~~el~~~~~l  237 (246)
                      ...+..|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-    ++.+..+..+++  ++.+..+-++...|
T Consensus       183 ~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~----Na~~~vK~~A~~~~v~~~n~edGva~~l  258 (272)
T PRK15126        183 LPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG----NAMPQLRAELPHLPVIGHCRNQAVSHYL  258 (272)
T ss_pred             ecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc----CChHHHHHhCCCCeecCCCcchHHHHHH
Confidence            356667889999999999999999999999999999999999877666    444445556665  78899999999999


Q ss_pred             hhhhcCC
Q 025896          238 EELDKNK  244 (246)
Q Consensus       238 ~~~~~~~  244 (246)
                      +++-..|
T Consensus       259 ~~~~~~~  265 (272)
T PRK15126        259 THWLDYP  265 (272)
T ss_pred             HHHhcCC
Confidence            8877655

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.60  E-value=1.8e-15  Score=106.87  Aligned_cols=95  Identities=21%  Similarity=0.239  Sum_probs=86.2

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC-cceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD-FFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      ...++||+.++|++|+ .+++++|+|++....++..++++++.. +|+.++++++....||.   |.+.+++++.+|++|
T Consensus        43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~~  118 (148)
T smart00577       43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSNV  118 (148)
T ss_pred             EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhcE
Confidence            4678999999999998 469999999999999999999999864 56999999998888886   888999999999999


Q ss_pred             EEEecChhhhHHHHhcCCCE
Q 025896          185 FVFEDSVSGIKAGVAAGLPV  204 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~~  204 (246)
                      ++|||+.+|+.++.++|+..
T Consensus       119 i~i~Ds~~~~~aa~~ngI~i  138 (148)
T smart00577      119 IIIDDSPDSWPFHPENLIPI  138 (148)
T ss_pred             EEEECCHHHhhcCccCEEEe
Confidence            99999999999999998653

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=99.59  E-value=1.6e-15  Score=115.12  Aligned_cols=110  Identities=15%  Similarity=0.027  Sum_probs=80.4

Q ss_pred             EEEEeCCCHHHHHHHHHhcCCCCcc-eEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEE
Q 025896          127 RAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVV  205 (246)
Q Consensus       127 i~i~s~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i  205 (246)
                      ..+.+..........++.++..-.+ ......+......++...++.+++++|++++++++|||+.||++|++.+|+.++
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~va  189 (225)
T TIGR01482       110 VKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVA  189 (225)
T ss_pred             EEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEE
Confidence            4455555566667777776643110 001112333556778899999999999999999999999999999999998766


Q ss_pred             EEcCCCChhhhhccCCcEEecCCCChh----hHHHHhhh
Q 025896          206 GLTTRNPEHVLLEANPTFLIKDYDDPK----LWSALEEL  240 (246)
Q Consensus       206 ~v~~~~~~~~~~~~~~~~~i~~~~el~----~~~~l~~~  240 (246)
                      +-    ++.+..+..+++++.+..+-+    +...|+++
T Consensus       190 m~----Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~~~  224 (225)
T TIGR01482       190 VA----NAQPELKEWADYVTESPYGEGGAEAIGEILQAI  224 (225)
T ss_pred             cC----ChhHHHHHhcCeecCCCCCCcHHHHHHHHHHhh
Confidence            66    455556678999999999988    77777664

catalyze the same reaction as SPP.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=99.59  E-value=1.9e-15  Score=117.46  Aligned_cols=79  Identities=19%  Similarity=0.165  Sum_probs=66.8

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhh
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      ...+..+..+++.+++++|++++++++|||+.||++|.+.+|.++++-    ++.+.....++++..+..+-++...++.
T Consensus       184 ~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~----Na~~~~k~~A~~vt~~n~~~Gv~~~l~~  259 (264)
T COG0561         184 TPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG----NADEELKELADYVTTSNDEDGVAEALEK  259 (264)
T ss_pred             ecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc----CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence            356677888999999999999999999999999999999999877766    4445555677788899999999999887


Q ss_pred             hhc
Q 025896          240 LDK  242 (246)
Q Consensus       240 ~~~  242 (246)
                      +..
T Consensus       260 ~~~  262 (264)
T COG0561         260 LLL  262 (264)
T ss_pred             Hhc
Confidence            653

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=99.58  E-value=1.1e-15  Score=119.27  Aligned_cols=78  Identities=14%  Similarity=0.034  Sum_probs=67.3

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhh
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      ...+..+..+++.+++.+|++++++++|||+.||++|.+.+|.++++-    ++.+..+..|++++.+..+-++...+++
T Consensus       191 ~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~----NA~~~vK~~A~~vt~~n~~dGva~~i~~  266 (270)
T PRK10513        191 LDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG----NAIPSVKEVAQFVTKSNLEDGVAFAIEK  266 (270)
T ss_pred             eCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec----CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence            456777889999999999999999999999999999999999977776    4555566789999999999999888877


Q ss_pred             hh
Q 025896          240 LD  241 (246)
Q Consensus       240 ~~  241 (246)
                      +.
T Consensus       267 ~~  268 (270)
T PRK10513        267 YV  268 (270)
T ss_pred             Hh
Confidence            53

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.58  E-value=1.5e-13  Score=104.97  Aligned_cols=131  Identities=9%  Similarity=0.113  Sum_probs=94.1

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEE------EecCCCCCCCCCh---------HH
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVV------ILGDECERAKPFP---------DP  169 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~------~~~~~~~~~kp~~---------~~  169 (246)
                      ..+.+.||+.++++.|+++|++++|+|++....++..++++|+.+.+..+      +..+....++|.|         ..
T Consensus       118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v  197 (277)
T TIGR01544       118 SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV  197 (277)
T ss_pred             cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence            36889999999999999999999999999999999999999987556555      3333444456666         56


Q ss_pred             HHHHHHHcC--CCCCcEEEEecChhhhHHHHhc-CC---CEEEEcCCCChhhhhc--cCCcEEecCCCChhhHH
Q 025896          170 YFKALEMLK--VSKDHTFVFEDSVSGIKAGVAA-GL---PVVGLTTRNPEHVLLE--ANPTFLIKDYDDPKLWS  235 (246)
Q Consensus       170 ~~~~~~~~~--~~~~~~~~igD~~~Di~~a~~~-G~---~~i~v~~~~~~~~~~~--~~~~~~i~~~~el~~~~  235 (246)
                      ++...+.++  ..+++|++|||+.+|+.||..+ ..   -.|++...+....+..  ..=|.|+-+-.-+.++.
T Consensus       198 ~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~  271 (277)
T TIGR01544       198 ALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVAN  271 (277)
T ss_pred             HHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHH
Confidence            667888888  8999999999999999998876 32   2444444432222221  23455555444444443

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.57  E-value=7.4e-15  Score=91.26  Aligned_cols=70  Identities=27%  Similarity=0.344  Sum_probs=62.0

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecC-hhhhHHHHhcCCCEEEEcCCCChhhhh---ccCCcEEecCCCCh
Q 025896          162 RAKPFPDPYFKALEMLKVSKDHTFVFEDS-VSGIKAGVAAGLPVVGLTTRNPEHVLL---EANPTFLIKDYDDP  231 (246)
Q Consensus       162 ~~kp~~~~~~~~~~~~~~~~~~~~~igD~-~~Di~~a~~~G~~~i~v~~~~~~~~~~---~~~~~~~i~~~~el  231 (246)
                      .+||+|.++..++++++++++++++|||+ ..|+.+|+++|+.+++|.+|....+..   ...|+++++++.|+
T Consensus         2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~   75 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA   75 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence            58999999999999999999999999999 699999999999999999995443332   36899999999873

...

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.57  E-value=3.1e-14  Score=118.35  Aligned_cols=92  Identities=26%  Similarity=0.305  Sum_probs=80.9

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCH------------HHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHH
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPR------------ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~------------~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      ++||+.+.|++|++.|++++|+||...            ..+..+++.+|+.  |+.+++.+.....||++.++..++++
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~  275 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEE  275 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHh
Confidence            689999999999999999999999755            3477888889986  88888777778899999999999999


Q ss_pred             cC----CCCCcEEEEecChhhhHHHHhcCC
Q 025896          177 LK----VSKDHTFVFEDSVSGIKAGVAAGL  202 (246)
Q Consensus       177 ~~----~~~~~~~~igD~~~Di~~a~~~G~  202 (246)
                      ++    +++++++||||+..|+.+++.+|.
T Consensus       276 ~~~~~~Id~~~S~~VGDaagr~~~g~~ag~  305 (526)
T TIGR01663       276 ANDGTEIQEDDCFFVGDAAGRPANGKAAGK  305 (526)
T ss_pred             cCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence            85    899999999999999888777765

Note that the EC number for the kinase function is: 2.7.1.78

>PRK08238 hypothetical protein; Validated

Probab=99.56  E-value=2.6e-13  Score=112.44  Aligned_cols=99  Identities=16%  Similarity=0.073  Sum_probs=81.9

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ..+++|++.+++++++++|++++++|+.+....+..++++|+   ||.++++++....||++.. ..+.+.++  .++++
T Consensus        70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~~~  143 (479)
T PRK08238         70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKA-AALVEAFG--ERGFD  143 (479)
T ss_pred             hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccccCCchHH-HHHHHHhC--ccCee
Confidence            456789999999999999999999999999999999999987   8999988877666665433 33445554  36689


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcCCC
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~~~  211 (246)
                      ++||+.+|+++++.+| ..+.|+.+.
T Consensus       144 yvGDS~~Dlp~~~~A~-~av~Vn~~~  168 (479)
T PRK08238        144 YAGNSAADLPVWAAAR-RAIVVGASP  168 (479)
T ss_pred             EecCCHHHHHHHHhCC-CeEEECCCH
Confidence            9999999999999999 677786553

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=99.56  E-value=2.2e-15  Score=113.48  Aligned_cols=106  Identities=11%  Similarity=-0.007  Sum_probs=76.1

Q ss_pred             eEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEE
Q 025896          126 KRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVV  205 (246)
Q Consensus       126 ~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i  205 (246)
                      .+++++......+...++..++..++.. ...+....+..+...++.++++++++++++++|||+.||++|++.+|+.++
T Consensus       109 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~va  187 (215)
T TIGR01487       109 LVIMREGKDVDEVREIIKERGLNLVDSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVA  187 (215)
T ss_pred             EEEecCCccHHHHHHHHHhCCeEEEecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEE
Confidence            3444566566667777777665432211 111223456667789999999999999999999999999999999998877


Q ss_pred             EEcCCCChhhhhccCCcEEecCCCChhhHHH
Q 025896          206 GLTTRNPEHVLLEANPTFLIKDYDDPKLWSA  236 (246)
Q Consensus       206 ~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~  236 (246)
                      +-    +..+..+..+++++.+..+-++...
T Consensus       188 m~----na~~~~k~~A~~v~~~~~~~Gv~~~  214 (215)
T TIGR01487       188 VA----NADDQLKEIADYVTSNPYGEGVVEV  214 (215)
T ss_pred             cC----CccHHHHHhCCEEcCCCCCchhhhh
Confidence            76    3445555678999998888666553

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK10976 putative hydrolase; Provisional

Probab=99.55  E-value=2.3e-15  Score=117.12  Aligned_cols=78  Identities=15%  Similarity=0.021  Sum_probs=65.4

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCc--EEecCCCChhhHHHH
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPT--FLIKDYDDPKLWSAL  237 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~--~~i~~~~el~~~~~l  237 (246)
                      ...+..+..+++.+++.+|++++++++|||+.||++|.+.+|.++++-    ++.+..+..++  +++.+..|-++...|
T Consensus       185 ~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~----NA~~~vK~~A~~~~v~~~n~edGVa~~l  260 (266)
T PRK10976        185 MAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG----NAHQRLKDLLPELEVIGSNADDAVPHYL  260 (266)
T ss_pred             EcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec----CCcHHHHHhCCCCeecccCchHHHHHHH
Confidence            355667889999999999999999999999999999999999987777    44444555655  788899999999988


Q ss_pred             hhhh
Q 025896          238 EELD  241 (246)
Q Consensus       238 ~~~~  241 (246)
                      +++.
T Consensus       261 ~~~~  264 (266)
T PRK10976        261 RKLY  264 (266)
T ss_pred             HHHh
Confidence            8753

>PTZ00445 p36-lilke protein; Provisional

Probab=99.54  E-value=1.1e-13  Score=99.87  Aligned_cols=103  Identities=17%  Similarity=0.177  Sum_probs=81.5

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHH---------------HHHHHHHhcCCCCcceEEEecC-----------CC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRE---------------NAELMISKLGLSDFFQVVILGD-----------EC  160 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~---------------~~~~~l~~~~l~~~f~~~~~~~-----------~~  160 (246)
                      ..+.|+...++.+|++.|++++|||-++..               .++..++..+-..-...++...           ..
T Consensus        74 ~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~  153 (219)
T PTZ00445         74 TSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPL  153 (219)
T ss_pred             ccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhh
Confidence            346677889999999999999999987653               3555565544333334444322           23


Q ss_pred             CCCCCChHH--H--HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcC
Q 025896          161 ERAKPFPDP--Y--FKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTT  209 (246)
Q Consensus       161 ~~~kp~~~~--~--~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~  209 (246)
                      +..||.|..  |  +++++++|+.|++++||+|+..++++|++.|+.++.+..
T Consensus       154 gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~  206 (219)
T PTZ00445        154 GLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG  206 (219)
T ss_pred             cccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence            678999999  8  999999999999999999999999999999999999954

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=99.53  E-value=6.3e-14  Score=99.56  Aligned_cols=104  Identities=13%  Similarity=0.214  Sum_probs=75.0

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHhcCCC----------CcceEEEecCCCCCCCCChHHHHHH
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNA-PRENAELMISKLGLS----------DFFQVVILGDECERAKPFPDPYFKA  173 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~-~~~~~~~~l~~~~l~----------~~f~~~~~~~~~~~~kp~~~~~~~~  173 (246)
                      ..+.+||++.++|++|+++|++++++|-. .+..++..|+.+++.          ++|+..-...    + ++..-|+.+
T Consensus        42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~----g-sK~~Hf~~i  116 (169)
T PF12689_consen   42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYP----G-SKTTHFRRI  116 (169)
T ss_dssp             -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESS----S--HHHHHHHH
T ss_pred             CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheec----C-chHHHHHHH
Confidence            46899999999999999999999999954 467899999999999          8887654333    2 567789999


Q ss_pred             HHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh
Q 025896          174 LEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE  213 (246)
Q Consensus       174 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~  213 (246)
                      .++.|++.++++||+|...++...+..|+.++.+.+|-..
T Consensus       117 ~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~  156 (169)
T PF12689_consen  117 HRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTW  156 (169)
T ss_dssp             HHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--H
T ss_pred             HHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCH
Confidence            9999999999999999999999999999999999887433

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=99.52  E-value=3.5e-12  Score=95.20  Aligned_cols=118  Identities=9%  Similarity=-0.012  Sum_probs=78.6

Q ss_pred             CchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHH-HHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecC----
Q 025896           84 DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKK-WIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGD----  158 (246)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~----  158 (246)
                      ....+.+....+.+.+..    ...++|++.+.|+ .+++.|++++|+|+.....++.+.+..++....+ +++..    
T Consensus        74 ~~~~l~~~~~~f~~~~~~----~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i~t~le~~  148 (210)
T TIGR01545        74 REAHLQDLEADFVAAFRD----KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LIASQIERG  148 (210)
T ss_pred             CHHHHHHHHHHHHHHHHH----hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EEEEEeEEe
Confidence            555555555544444433    2468999999996 7888999999999999999999998865532222 22211    


Q ss_pred             CCCC--CC--CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          159 ECER--AK--PFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       159 ~~~~--~k--p~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      +.+.  +.  -..+-..++-+.++.+.+.+.+.|||.+|++|...+|.+ +.|
T Consensus       149 ~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~-~~V  200 (210)
T TIGR01545       149 NGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHR-WRV  200 (210)
T ss_pred             CCceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCc-EEE
Confidence            1111  11  122334455555666667789999999999999999976 445

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=99.52  E-value=1.9e-14  Score=97.89  Aligned_cols=101  Identities=18%  Similarity=0.229  Sum_probs=83.7

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      -++.|.+.|++++|+|+.+....+.+.+.+|+..+|-++         +.+...+..+++++++.+++|.||||..+|+.
T Consensus        43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG~---------~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlp  113 (170)
T COG1778          43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGI---------SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLP  113 (170)
T ss_pred             HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeech---------HhHHHHHHHHHHHhCCCHHHhhhhcCccccHH
Confidence            356667899999999999999999999999998766543         23667899999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCC
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYD  229 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~  229 (246)
                      +.+.+|++++..    ++.+.....++|+.+.-.
T Consensus       114 vm~~vGls~a~~----dAh~~v~~~a~~Vt~~~G  143 (170)
T COG1778         114 VMEKVGLSVAVA----DAHPLLKQRADYVTSKKG  143 (170)
T ss_pred             HHHHcCCccccc----ccCHHHHHhhHhhhhccC
Confidence            999999987776    455555556777766443

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.52  E-value=2.3e-14  Score=111.80  Aligned_cols=116  Identities=20%  Similarity=0.160  Sum_probs=74.2

Q ss_pred             HHHHcCCeEEEE---eCCCHHHHHHHHHhcCCC----CcceEEEecCCCCCCCCChHHHHHHHHHcCCCC-CcEEEEecC
Q 025896          119 WIEDRGLKRAAV---TNAPRENAELMISKLGLS----DFFQVVILGDECERAKPFPDPYFKALEMLKVSK-DHTFVFEDS  190 (246)
Q Consensus       119 ~l~~~g~~i~i~---s~~~~~~~~~~l~~~~l~----~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~~~igD~  190 (246)
                      .++..++...++   +......+...++..++.    .+|.     +..... .+...++.+++.+++++ +++++|||+
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs  216 (273)
T PRK00192        143 LAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRGGRFL-----HLLGGG-DKGKAVRWLKELYRRQDGVETIALGDS  216 (273)
T ss_pred             HHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEECCeEE-----EEeCCC-CHHHHHHHHHHHHhccCCceEEEEcCC
Confidence            344445554444   333334455555555543    2222     222344 57778999999999999 999999999


Q ss_pred             hhhhHHHHhcCCCEEEEcCCCChhhhhccCC-cEEe--cCCCChhhHHHHhhh
Q 025896          191 VSGIKAGVAAGLPVVGLTTRNPEHVLLEANP-TFLI--KDYDDPKLWSALEEL  240 (246)
Q Consensus       191 ~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~-~~~i--~~~~el~~~~~l~~~  240 (246)
                      .||++|++.+|+++++-+....-.+.....+ +.+.  ++..+-++...++++
T Consensus       217 ~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~  269 (273)
T PRK00192        217 PNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKL  269 (273)
T ss_pred             hhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHH
Confidence            9999999999998887743322221111233 4555  677777888888764

>PLN02887 hydrolase family protein

Probab=99.51  E-value=1.6e-14  Score=121.61  Aligned_cols=77  Identities=17%  Similarity=0.032  Sum_probs=66.7

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhh
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      +..+..|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-    ++.+..+..|++|+.+..+-++...|++
T Consensus       502 ~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg----NA~eeVK~~Ad~VT~sNdEDGVA~aLek  577 (580)
T PLN02887        502 VPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS----NGAEKTKAVADVIGVSNDEDGVADAIYR  577 (580)
T ss_pred             ecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC----CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence            356677889999999999999999999999999999999999877766    4555566789999999999999988876


Q ss_pred             h
Q 025896          240 L  240 (246)
Q Consensus       240 ~  240 (246)
                      +
T Consensus       578 ~  578 (580)
T PLN02887        578 Y  578 (580)
T ss_pred             h
Confidence            4

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.49  E-value=5.5e-14  Score=109.52  Aligned_cols=84  Identities=7%  Similarity=-0.058  Sum_probs=66.3

Q ss_pred             CCCCCCCChHHHHHHHHHcCC---CCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhh--hccCCcEEecCCCChhh
Q 025896          159 ECERAKPFPDPYFKALEMLKV---SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVL--LEANPTFLIKDYDDPKL  233 (246)
Q Consensus       159 ~~~~~kp~~~~~~~~~~~~~~---~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~~~~~~i~~~~el~~  233 (246)
                      ....+..|..+++.+++.+|+   ++++++.|||+.||++|.+.+|.++++-+.......+  ....++++.....+-++
T Consensus       181 i~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~  260 (271)
T PRK03669        181 VLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGW  260 (271)
T ss_pred             EecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHH
Confidence            345677788999999999999   9999999999999999999999877666422111122  23478899999999999


Q ss_pred             HHHHhhhhc
Q 025896          234 WSALEELDK  242 (246)
Q Consensus       234 ~~~l~~~~~  242 (246)
                      ...++.+-+
T Consensus       261 ~~~l~~~~~  269 (271)
T PRK03669        261 REGLDHFFS  269 (271)
T ss_pred             HHHHHHHHh
Confidence            998887654

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=99.46  E-value=2.3e-12  Score=101.67  Aligned_cols=105  Identities=18%  Similarity=0.183  Sum_probs=86.1

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc-C-------CCCcceEEEecCCC-----------------
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL-G-------LSDFFQVVILGDEC-----------------  160 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~-~-------l~~~f~~~~~~~~~-----------------  160 (246)
                      .+...||+.++|++|+++|++++|+||++...+...++.+ |       +.++||.++++...                 
T Consensus       182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~  261 (343)
T TIGR02244       182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVET  261 (343)
T ss_pred             HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCC
Confidence            3567999999999999999999999999999999999996 7       88999998876421                 


Q ss_pred             CCCCCC-------h-----HHHHHHHHHcCCCCCcEEEEecCh-hhhHHHH-hcCCCEEEEcCC
Q 025896          161 ERAKPF-------P-----DPYFKALEMLKVSKDHTFVFEDSV-SGIKAGV-AAGLPVVGLTTR  210 (246)
Q Consensus       161 ~~~kp~-------~-----~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~-~~G~~~i~v~~~  210 (246)
                      +..++.       .     .....+.+.+++.++++++|||+. .|+..++ .+||.++++...
T Consensus       262 g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE  325 (343)
T TIGR02244       262 GSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE  325 (343)
T ss_pred             CcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence            101111       1     125578888899999999999999 9999998 899999999543

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=99.44  E-value=6e-13  Score=100.62  Aligned_cols=70  Identities=16%  Similarity=0.188  Sum_probs=59.8

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChhhhh-------ccCCcEEecCCCC
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVLL-------EANPTFLIKDYDD  230 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~-------~~~~~~~i~~~~e  230 (246)
                      -.+||++.++..+++++++.|++|+||||++ .||.-++.+|++++++.+|-...+..       ...|||.++++.+
T Consensus       221 v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d  298 (306)
T KOG2882|consen  221 VLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGD  298 (306)
T ss_pred             ecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHH
Confidence            4689999999999999999999999999999 89999999999999999995432222       2348888888877

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=99.44  E-value=2.2e-13  Score=105.41  Aligned_cols=73  Identities=18%  Similarity=0.140  Sum_probs=59.7

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHH
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSA  236 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~  236 (246)
                      ...+..|...++.+++.++++++++++|||+.||++|++.+|+++++.    ++.+.....+++++.+..+-++...
T Consensus       183 ~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~----na~~~~k~~a~~~~~~n~~dGV~~~  255 (256)
T TIGR00099       183 TAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG----NADEELKALADYVTDSNNEDGVALA  255 (256)
T ss_pred             cCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec----CchHHHHHhCCEEecCCCCcchhhh
Confidence            355667889999999999999999999999999999999999986664    2333445678999999888666543

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.43  E-value=3e-12  Score=92.22  Aligned_cols=117  Identities=16%  Similarity=0.153  Sum_probs=83.3

Q ss_pred             ccCCCcccHHHHHHHHHHcCC-eEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC----C------CC-------CC-
Q 025896          105 EQLKPISGLDKVKKWIEDRGL-KRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC----E------RA-------KP-  165 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~-~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~----~------~~-------kp-  165 (246)
                      ..++..||+.++++.+++.|. .+.|+|+.+...++.+|+++++.++|..|++....    |      ..       .| 
T Consensus        81 r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPs  160 (256)
T KOG3120|consen   81 RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPS  160 (256)
T ss_pred             hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCch
Confidence            368899999999999999985 99999999999999999999999999888764211    0      00       11 


Q ss_pred             ---ChHHHHHHHH---HcCCCCCcEEEEecChhhhHHHHhc-CCCEEEEcCCCChhhhhccCC
Q 025896          166 ---FPDPYFKALE---MLKVSKDHTFVFEDSVSGIKAGVAA-GLPVVGLTTRNPEHVLLEANP  221 (246)
Q Consensus       166 ---~~~~~~~~~~---~~~~~~~~~~~igD~~~Di~~a~~~-G~~~i~v~~~~~~~~~~~~~~  221 (246)
                         +..++..+..   +-|+..++++|+||+-||+.+.... +..+++.+.|+.-.......|
T Consensus       161 NmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p  223 (256)
T KOG3120|consen  161 NMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANP  223 (256)
T ss_pred             hhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCc
Confidence               1122222222   2367778999999999999666554 556777777765444333333

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=99.42  E-value=1.1e-12  Score=100.33  Aligned_cols=110  Identities=10%  Similarity=-0.026  Sum_probs=75.2

Q ss_pred             CeEEEEeCCCH----HHHHHHHHhcCCCCcceEEEec----CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHH
Q 025896          125 LKRAAVTNAPR----ENAELMISKLGLSDFFQVVILG----DECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKA  196 (246)
Q Consensus       125 ~~i~i~s~~~~----~~~~~~l~~~~l~~~f~~~~~~----~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~  196 (246)
                      +.+.+......    ..+...+...+..  +..+.++    +....+.+++.+++.++++++++++++++|||+.||++|
T Consensus       113 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~m  190 (236)
T TIGR02471       113 FKISYLLDPEGEPILPQIRQRLRQQSQA--AKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEM  190 (236)
T ss_pred             eeEEEEECcccchHHHHHHHHHHhccCC--EEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHH
Confidence            45555544321    2344455554432  2333343    334667889999999999999999999999999999999


Q ss_pred             HHhcCCCEEEEcCCCChhhhhccCCc----EEecCCCChhhHHHHhhh
Q 025896          197 GVAAGLPVVGLTTRNPEHVLLEANPT----FLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       197 a~~~G~~~i~v~~~~~~~~~~~~~~~----~~i~~~~el~~~~~l~~~  240 (246)
                      ++.+|.++++-   +..++.. ..++    +++++..+-++.+.|+.+
T Consensus       191 l~~~~~~iav~---na~~~~k-~~a~~~~~~v~~~~~~~Gv~~~i~~~  234 (236)
T TIGR02471       191 LRGLTLGVVVG---NHDPELE-GLRHQQRIYFANNPHAFGILEGINHY  234 (236)
T ss_pred             HcCCCcEEEEc---CCcHHHH-HhhcCCcEEEcCCCChhHHHHHHHhh
Confidence            99999766543   2333333 3455    788888888888888764

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.41  E-value=6.6e-12  Score=88.66  Aligned_cols=93  Identities=12%  Similarity=0.161  Sum_probs=70.9

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC--cceEE--------EecCC----CCCCCCChHHH
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD--FFQVV--------ILGDE----CERAKPFPDPY  170 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~--~f~~~--------~~~~~----~~~~kp~~~~~  170 (246)
                      ...++.||++++..+||++|..++++|++....+..+...+|+.-  .|-..        +.+.+    ...+--+++.+
T Consensus        85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i  164 (227)
T KOG1615|consen   85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI  164 (227)
T ss_pred             CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence            468899999999999999999999999999999999999999873  33221        21211    11122345566


Q ss_pred             HHHHHHcCCCCCcEEEEecChhhhHHHHh
Q 025896          171 FKALEMLKVSKDHTFVFEDSVSGIKAGVA  199 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~igD~~~Di~~a~~  199 (246)
                      ..+.+  +.....++||||+.+|+++..-
T Consensus       165 ~~lrk--~~~~~~~~mvGDGatDlea~~p  191 (227)
T KOG1615|consen  165 ALLRK--NYNYKTIVMVGDGATDLEAMPP  191 (227)
T ss_pred             HHHHh--CCChheeEEecCCccccccCCc
Confidence            66666  7777999999999999998665

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=99.40  E-value=1.5e-12  Score=96.35  Aligned_cols=87  Identities=16%  Similarity=0.220  Sum_probs=62.7

Q ss_pred             ccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCc--ceEEEecCC-C---C--CCC---CChHHHHHH---HHH
Q 025896          111 SGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF--FQVVILGDE-C---E--RAK---PFPDPYFKA---LEM  176 (246)
Q Consensus       111 ~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~-~---~--~~k---p~~~~~~~~---~~~  176 (246)
                      +++.++|++++++|++++|+|++....++.+++.+|+...  +..-+.... .   +  .+.   -+...++.+   ...
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~  171 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE  171 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence            5556999999999999999999999999999999998752  222221100 0   0  000   144455555   333


Q ss_pred             cCCCCCcEEEEecChhhhHHHH
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGV  198 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~  198 (246)
                       +....++++|||+.+|+.+++
T Consensus       172 -~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  172 -DIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             -THTCCEEEEEESSGGGHHHHH
T ss_pred             -CCCCCeEEEEECCHHHHHHhC
Confidence             788899999999999999985

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=99.38  E-value=1.5e-11  Score=94.11  Aligned_cols=86  Identities=15%  Similarity=0.240  Sum_probs=67.4

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHH---HHHHHHHhcCCCCc-ceEEEecCCCCCCCCChHHHHHHHHHcCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRE---NAELMISKLGLSDF-FQVVILGDECERAKPFPDPYFKALEMLKVSK  181 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~---~~~~~l~~~~l~~~-f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~  181 (246)
                      ...++||+.++|+.|+++|++++++|+....   .....++++|+... ++.++..+.   .++++.....+.+.+++  
T Consensus       116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~---~~~K~~rr~~I~~~y~I--  190 (266)
T TIGR01533       116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD---KSSKESRRQKVQKDYEI--  190 (266)
T ss_pred             CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC---CCCcHHHHHHHHhcCCE--
Confidence            5778999999999999999999999998743   45578888999754 466665542   34566777777777777  


Q ss_pred             CcEEEEecChhhhHHHH
Q 025896          182 DHTFVFEDSVSGIKAGV  198 (246)
Q Consensus       182 ~~~~~igD~~~Di~~a~  198 (246)
                        +++|||..+|+..+.
T Consensus       191 --vl~vGD~~~Df~~~~  205 (266)
T TIGR01533       191 --VLLFGDNLLDFDDFF  205 (266)
T ss_pred             --EEEECCCHHHhhhhh
Confidence              899999999996543

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.36  E-value=3.5e-12  Score=97.74  Aligned_cols=91  Identities=13%  Similarity=0.136  Sum_probs=75.4

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHH--HHHHhcCCCC-cceEEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAE--LMISKLGLSD-FFQVVILGDECERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~--~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      ..++||+.++|++|+++|++++++||.++....  ..++++|+.. .|+.++++.....     ..+...+++++..+++
T Consensus        23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~-----~~l~~~~~~~~~~~~~   97 (242)
T TIGR01459        23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV-----QMILESKKRFDIRNGI   97 (242)
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH-----HHHHhhhhhccCCCce
Confidence            346899999999999999999999998876655  7889999987 8999988775432     3566777888899999


Q ss_pred             EEEEecChhhhHHHHhcCC
Q 025896          184 TFVFEDSVSGIKAGVAAGL  202 (246)
Q Consensus       184 ~~~igD~~~Di~~a~~~G~  202 (246)
                      +++|||+..|+.....+|.
T Consensus        98 ~~~vGd~~~d~~~~~~~~~  116 (242)
T TIGR01459        98 IYLLGHLENDIINLMQCYT  116 (242)
T ss_pred             EEEeCCcccchhhhcCCCc
Confidence            9999999999888766554

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=99.36  E-value=1.4e-11  Score=87.23  Aligned_cols=92  Identities=18%  Similarity=0.173  Sum_probs=67.6

Q ss_pred             CcccHHHHHHHHHHcCC--eEEEEeCC-------CHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          109 PISGLDKVKKWIEDRGL--KRAAVTNA-------PRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~--~i~i~s~~-------~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      +.|.+.+.+++|++.+.  +++|+||+       +...++..-+.+|+.-+-.        ...||  ..+..+++.++.
T Consensus        60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl~h--------~~kKP--~~~~~i~~~~~~  129 (168)
T PF09419_consen   60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVLRH--------RAKKP--GCFREILKYFKC  129 (168)
T ss_pred             CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEEEe--------CCCCC--ccHHHHHHHHhh
Confidence            33445567777777755  59999998       3566777777888641101        23566  556667776654


Q ss_pred             -----CCCcEEEEecCh-hhhHHHHhcCCCEEEEcCC
Q 025896          180 -----SKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       180 -----~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~  210 (246)
                           +|+++++|||.+ .|+-+|...|+.++++..|
T Consensus       130 ~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g  166 (168)
T PF09419_consen  130 QKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG  166 (168)
T ss_pred             ccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence                 599999999999 9999999999999999765

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=99.35  E-value=3.4e-11  Score=95.84  Aligned_cols=70  Identities=23%  Similarity=0.181  Sum_probs=57.1

Q ss_pred             CCCCCChHHHHHHHHHc--------CC-----CCCcEEEEecCh-hhhHHHHhcCCCEEEEcCC-CChhh-hhccCCcEE
Q 025896          161 ERAKPFPDPYFKALEML--------KV-----SKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTR-NPEHV-LLEANPTFL  224 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~--------~~-----~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~-~~~~~-~~~~~~~~~  224 (246)
                      ..+||++.+|+.+++.+        +.     ++++++||||++ +|+.+|+++|+.+++|.+| +...+ .....|+++
T Consensus       230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v  309 (321)
T TIGR01456       230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI  309 (321)
T ss_pred             EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence            35999999999988877        43     447999999999 9999999999999999988 33322 223468999


Q ss_pred             ecCCCC
Q 025896          225 IKDYDD  230 (246)
Q Consensus       225 i~~~~e  230 (246)
                      ++++.|
T Consensus       310 v~~l~e  315 (321)
T TIGR01456       310 VNDVFD  315 (321)
T ss_pred             ECCHHH
Confidence            999998

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=99.35  E-value=2.6e-13  Score=104.66  Aligned_cols=73  Identities=19%  Similarity=0.167  Sum_probs=58.9

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      .....+..+++.+++.+|++++++++|||+.||++|.+.+|.++++-    +..+.....+++++.+..+-++...|
T Consensus       182 ~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~----na~~~~k~~a~~i~~~~~~~gv~~~i  254 (254)
T PF08282_consen  182 PKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG----NATPELKKAADYITPSNNDDGVAKAI  254 (254)
T ss_dssp             ETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET----TS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred             eCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc----CCCHHHHHhCCEEecCCCCChHHHhC
Confidence            44566788999999999999999999999999999999999875555    34444556888999988886666543

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=99.34  E-value=1.2e-11  Score=88.08  Aligned_cols=93  Identities=25%  Similarity=0.311  Sum_probs=68.2

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCC---H-----------HHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHH
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAP---R-----------ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALE  175 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~---~-----------~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~  175 (246)
                      .+++.+.|++|++.|+.|+|+||-.   .           ..+..+++.+++.  +..++.......+||++.+++.+++
T Consensus        31 ~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~~~~a~~~d~~RKP~~GM~~~~~~  108 (159)
T PF08645_consen   31 PPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQVYAAPHKDPCRKPNPGMWEFALK  108 (159)
T ss_dssp             -TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EEEEECGCSSTTSTTSSHHHHHHCC
T ss_pred             chhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eEEEecCCCCCCCCCchhHHHHHHH
Confidence            4579999999999999999999851   1           2345566677765  4444444445789999999999999


Q ss_pred             HcCC----CCCcEEEEecC-----------hhhhHHHHhcCCCE
Q 025896          176 MLKV----SKDHTFVFEDS-----------VSGIKAGVAAGLPV  204 (246)
Q Consensus       176 ~~~~----~~~~~~~igD~-----------~~Di~~a~~~G~~~  204 (246)
                      +++.    +.++++||||.           ..|..-|.++|+++
T Consensus       109 ~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f  152 (159)
T PF08645_consen  109 DYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF  152 (159)
T ss_dssp             CTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred             hccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence            9864    88999999996           57899999999874

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=99.34  E-value=1.3e-12  Score=99.63  Aligned_cols=50  Identities=24%  Similarity=0.349  Sum_probs=46.0

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcE-EEEecCh-hhhHHHHhcCCCEEEEcCC
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHT-FVFEDSV-SGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~-~~igD~~-~Di~~a~~~G~~~i~v~~~  210 (246)
                      ..+||++..|+.++++++++++++ +||||+. +|+.+|+++|+.++++.+|
T Consensus       185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G  236 (236)
T TIGR01460       185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG  236 (236)
T ss_pred             eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence            367999999999999999998887 9999999 8999999999999999654

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.34  E-value=9.3e-13  Score=100.91  Aligned_cols=98  Identities=19%  Similarity=0.269  Sum_probs=81.5

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEE--EecCCCCCCCCChHHHHHHHHHcCCC-CCcEEE
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVV--ILGDECERAKPFPDPYFKALEMLKVS-KDHTFV  186 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~--~~~~~~~~~kp~~~~~~~~~~~~~~~-~~~~~~  186 (246)
                      ++++.++++.|+++|+++ |+||.+.......+...+...+|..+  .+.+....+||+|..|+.++++++.. +++++|
T Consensus       140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~  218 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLM  218 (242)
T ss_pred             HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence            688899999998899997 88999877766666666766666644  44555568999999999999999875 578999


Q ss_pred             EecCh-hhhHHHHhcCCCEEEEc
Q 025896          187 FEDSV-SGIKAGVAAGLPVVGLT  208 (246)
Q Consensus       187 igD~~-~Di~~a~~~G~~~i~v~  208 (246)
                      |||+. +|+.+|+++|+.+++|.
T Consensus       219 vGD~~~~Di~~a~~~G~~~i~v~  241 (242)
T TIGR01459       219 VGDSFYTDILGANRLGIDTALVL  241 (242)
T ss_pred             ECCCcHHHHHHHHHCCCeEEEEe
Confidence            99995 99999999999999984

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=99.31  E-value=4.6e-11  Score=92.03  Aligned_cols=112  Identities=14%  Similarity=0.126  Sum_probs=75.4

Q ss_pred             CeEEEEeCCCH-----HHHHHHHHhcCCCCcceEEEec----CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          125 LKRAAVTNAPR-----ENAELMISKLGLSDFFQVVILG----DECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       125 ~~i~i~s~~~~-----~~~~~~l~~~~l~~~f~~~~~~----~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      +++.++.....     ..+...+...++.  +..++++    +......++..+++.+++.++++++++++|||+.||++
T Consensus       120 ~k~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~  197 (249)
T TIGR01485       120 HKVSFFLDPEAAPEVIKQLTEMLKETGLD--VKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIE  197 (249)
T ss_pred             eeEEEEechhhhhHHHHHHHHHHHhcCCC--EEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHH
Confidence            55666554322     2223444444443  3333433    34467888999999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhh------ccCCcEEecCCCChhhHHHHhhh
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLL------EANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~------~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      |++.++..++.+.+..  .+..      .....++.+...+.++...++.+
T Consensus       198 ml~~~~~~~va~~na~--~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~  246 (249)
T TIGR01485       198 LFEIGSVRGVIVSNAQ--EELLQWYDENAKDKIYHASERCAGGIIEAIAHF  246 (249)
T ss_pred             HHHccCCcEEEECCCH--HHHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence            9999766666765442  2222      12234788888888888888765

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR01684 viral_ppase viral phosphatase

Probab=99.31  E-value=3.8e-11  Score=91.67  Aligned_cols=62  Identities=13%  Similarity=0.170  Sum_probs=54.6

Q ss_pred             CCCc-ccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChH
Q 025896          107 LKPI-SGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPD  168 (246)
Q Consensus       107 ~~~~-~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~  168 (246)
                      +++. ||+.++|++|+++|++++|+|++.+..+...++++|+..+|+.++++++....+|.++
T Consensus       144 v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e  206 (301)
T TIGR01684       144 VRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMS  206 (301)
T ss_pred             cccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCcc
Confidence            3344 7899999999999999999999999999999999999999999999988777776653

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=99.28  E-value=1.5e-10  Score=81.13  Aligned_cols=93  Identities=16%  Similarity=0.230  Sum_probs=69.4

Q ss_pred             hccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc-------eE----------EEecCC--CCCCC
Q 025896          104 SEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF-------QV----------VILGDE--CERAK  164 (246)
Q Consensus       104 ~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f-------~~----------~~~~~~--~~~~k  164 (246)
                      ...+.+.||..++.+++++++++++|+|++-...+...+++.+-..-.       +.          +...++  .+..|
T Consensus        69 lk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK  148 (220)
T COG4359          69 LKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDK  148 (220)
T ss_pred             HhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCc
Confidence            356899999999999999999999999999999999999887521111       11          111111  13333


Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCC
Q 025896          165 PFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGL  202 (246)
Q Consensus       165 p~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~  202 (246)
                      |      .....+.-+++.++|+||+..|+.+|+...+
T Consensus       149 ~------~vI~~l~e~~e~~fy~GDsvsDlsaaklsDl  180 (220)
T COG4359         149 S------SVIHELSEPNESIFYCGDSVSDLSAAKLSDL  180 (220)
T ss_pred             c------hhHHHhhcCCceEEEecCCcccccHhhhhhh
Confidence            3      3556666677889999999999999999885

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=99.28  E-value=4.1e-11  Score=102.41  Aligned_cols=116  Identities=16%  Similarity=0.198  Sum_probs=87.5

Q ss_pred             CCCcccHHHHHHHHHHcC-CeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          107 LKPISGLDKVKKWIEDRG-LKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g-~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ..++||+.++|++|++.| ++++++|+.+....+..++++|+.++|..+.           |+-...++++++..+++++
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~-----------p~~K~~~v~~l~~~~~~v~  451 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL-----------PEDKLAIVKELQEEGGVVA  451 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC-----------HHHHHHHHHHHHHcCCEEE
Confidence            468999999999999999 9999999999999999999999987776431           1122345555555778999


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      ||||+.||+.+++.+|+   .+..++ ..+.....+|+++.+-+-..+..++
T Consensus       452 ~vGDg~nD~~al~~A~v---gia~g~-~~~~~~~~Ad~vi~~~~~~~l~~~i  499 (556)
T TIGR01525       452 MVGDGINDAPALAAADV---GIAMGA-GSDVAIEAADIVLLNDDLSSLPTAI  499 (556)
T ss_pred             EEECChhHHHHHhhCCE---eEEeCC-CCHHHHHhCCEEEeCCCHHHHHHHH
Confidence            99999999999999994   444443 3344446799999853322244443

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=99.27  E-value=5e-12  Score=95.68  Aligned_cols=68  Identities=13%  Similarity=0.067  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHhcCCC----CcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEE
Q 025896          133 APRENAELMISKLGLS----DFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVV  205 (246)
Q Consensus       133 ~~~~~~~~~l~~~~l~----~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i  205 (246)
                      .....+...+...++.    .+|.     +..+.+..++.+++.+++.+|++++++++|||+.||++|++.+|.+++
T Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~-----ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va  219 (221)
T TIGR02463       148 SRMPRFTALLADLGLAIVQGNRFS-----HVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV  219 (221)
T ss_pred             hHHHHHHHHHHHcCCeEEecCCee-----EEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence            3334455666665553    2222     222344456778999999999999999999999999999999998754

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=99.27  E-value=3e-11  Score=102.63  Aligned_cols=111  Identities=15%  Similarity=0.221  Sum_probs=88.1

Q ss_pred             CCCcccHHHHHHHHHHcCC-eEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          107 LKPISGLDKVKKWIEDRGL-KRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~-~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ..++||+.+.|++|++.|+ +++++|+.+....+..++++|+.++|..+.         |  +....++++++...++++
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~---------p--~~K~~~i~~l~~~~~~v~  429 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL---------P--EDKLEIVKELREKYGPVA  429 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC---------c--HHHHHHHHHHHhcCCEEE
Confidence            4688999999999999999 999999999999999999999988775331         1  122456666666678999


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEe--cCCCCh
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLI--KDYDDP  231 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el  231 (246)
                      ||||+.||+.+++.+|+   .+..+....+.....+++++  +++.++
T Consensus       430 ~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~~ad~vl~~~~l~~l  474 (536)
T TIGR01512       430 MVGDGINDAPALAAADV---GIAMGASGSDVAIETADVVLLNDDLSRL  474 (536)
T ss_pred             EEeCCHHHHHHHHhCCE---EEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence            99999999999999995   55555323444455789998  777774

.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=99.26  E-value=3.7e-12  Score=98.50  Aligned_cols=80  Identities=15%  Similarity=0.030  Sum_probs=62.2

Q ss_pred             CCCCCChHHHHHHHHHcCCC--CCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhcc--CCcEEecCCCChhhHHH
Q 025896          161 ERAKPFPDPYFKALEMLKVS--KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEA--NPTFLIKDYDDPKLWSA  236 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~--~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~--~~~~~i~~~~el~~~~~  236 (246)
                      .....+...++.+++.++++  .+++++|||+.||++|++.+|.++++-+.....++....  .++++..+..+-++...
T Consensus       172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~  251 (256)
T TIGR01486       172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREA  251 (256)
T ss_pred             cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHH
Confidence            45667788899999999999  999999999999999999999877766322111233332  24589989999999888


Q ss_pred             Hhhh
Q 025896          237 LEEL  240 (246)
Q Consensus       237 l~~~  240 (246)
                      ++.+
T Consensus       252 l~~~  255 (256)
T TIGR01486       252 LEHL  255 (256)
T ss_pred             HHHh
Confidence            8764

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=99.22  E-value=1.3e-11  Score=88.14  Aligned_cols=70  Identities=19%  Similarity=0.248  Sum_probs=60.5

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCC-CCh--hhhhccCCcEEecCCCC
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTR-NPE--HVLLEANPTFLIKDYDD  230 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~-~~~--~~~~~~~~~~~i~~~~e  230 (246)
                      ..+||++.+|+..++.+|++|++++||||.. .|+-.|+.+||..|.|.+| +.+  .+-....|+..++++.|
T Consensus       178 vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~  251 (262)
T KOG3040|consen  178 VVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFAD  251 (262)
T ss_pred             EecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHH
Confidence            4689999999999999999999999999999 6999999999999999998 333  33344577888888887

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=99.20  E-value=2.5e-11  Score=86.87  Aligned_cols=100  Identities=11%  Similarity=0.148  Sum_probs=87.0

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC-cceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD-FFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      .+...||+.++|++|++. +.++|.|++...+++.+++.++... +|+.++..+.....+++   +.+.++.+|.+++++
T Consensus        40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~v  115 (162)
T TIGR02251        40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSKV  115 (162)
T ss_pred             EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhhE
Confidence            467899999999999988 9999999999999999999999875 88988888776555554   567788889999999


Q ss_pred             EEEecChhhhHHHHhcCCCEEEEcC
Q 025896          185 FVFEDSVSGIKAGVAAGLPVVGLTT  209 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~~i~v~~  209 (246)
                      ++|||+..++.++...|+.+.....
T Consensus       116 IiVDD~~~~~~~~~~NgI~i~~f~~  140 (162)
T TIGR02251       116 IIIDNSPYSYSLQPDNAIPIKSWFG  140 (162)
T ss_pred             EEEeCChhhhccCccCEeecCCCCC
Confidence            9999999999999999988766653

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=99.10  E-value=5.2e-10  Score=100.33  Aligned_cols=120  Identities=16%  Similarity=0.245  Sum_probs=94.5

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCC----------------CCCCChHHHH
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECE----------------RAKPFPDPYF  171 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~~  171 (246)
                      +++|++.+.++.|++.|++++++|+.+...+....+.+|+...++.++++.+..                ...+.|+-..
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~  607 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKM  607 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHH
Confidence            678999999999999999999999999999999999999987666555543321                2235566667


Q ss_pred             HHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEe--cCCCC
Q 025896          172 KALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLI--KDYDD  230 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i--~~~~e  230 (246)
                      .+.+.++...+.++|+||+.||..+++.|++.   +..|....+.....+|+++  +++..
T Consensus       608 ~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVG---ia~g~~g~~va~~aaDivl~dd~~~~  665 (884)
T TIGR01522       608 KIVKALQKRGDVVAMTGDGVNDAPALKLADIG---VAMGQTGTDVAKEAADMILTDDDFAT  665 (884)
T ss_pred             HHHHHHHHCCCEEEEECCCcccHHHHHhCCee---EecCCCcCHHHHHhcCEEEcCCCHHH
Confidence            77777777778899999999999999999964   4444334455556889999  45666

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=99.09  E-value=1.4e-09  Score=83.31  Aligned_cols=85  Identities=15%  Similarity=0.145  Sum_probs=66.8

Q ss_pred             ccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCC----------------------------
Q 025896          111 SGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECER----------------------------  162 (246)
Q Consensus       111 ~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------------------  162 (246)
                      |++.++|++|++.|++++|+|+++...+...++.+|+..+|+.+++++....                            
T Consensus       151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~  230 (303)
T PHA03398        151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDV  230 (303)
T ss_pred             hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcc
Confidence            7788999999999999999999999999999999999999998887754211                            


Q ss_pred             -CCC-ChHHHHHHHHHcCCCCCc-EEEEecCh-hhhH
Q 025896          163 -AKP-FPDPYFKALEMLKVSKDH-TFVFEDSV-SGIK  195 (246)
Q Consensus       163 -~kp-~~~~~~~~~~~~~~~~~~-~~~igD~~-~Di~  195 (246)
                       ..| .|......+++.|+..-. +..|+|-. ||+.
T Consensus       231 ~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~~  267 (303)
T PHA03398        231 KNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNYS  267 (303)
T ss_pred             cCCCCCCeehHHHHHHcCcceeccEEEeccCcccCcc
Confidence             122 256677888888887644 45677766 6653

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=99.08  E-value=1.1e-09  Score=93.64  Aligned_cols=108  Identities=15%  Similarity=0.181  Sum_probs=81.2

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV  186 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  186 (246)
                      ..++||+.+++++|++.|++++++|+.+....+..++++|+. +|.     +.    +|  +.....+++++.++++++|
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~~-----~~----~p--~~K~~~v~~l~~~~~~v~~  471 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VRA-----EV----LP--DDKAALIKELQEKGRVVAM  471 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EEc-----cC----Ch--HHHHHHHHHHHHcCCEEEE
Confidence            457899999999999999999999999999999999999995 221     11    12  2223445555557789999


Q ss_pred             EecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEec--CCCC
Q 025896          187 FEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIK--DYDD  230 (246)
Q Consensus       187 igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~--~~~e  230 (246)
                      |||+.||+.+++.+|+.   +..++. .+.....+|+++.  ++.+
T Consensus       472 VGDg~nD~~al~~A~vg---ia~g~g-~~~a~~~Advvl~~~~l~~  513 (562)
T TIGR01511       472 VGDGINDAPALAQADVG---IAIGAG-TDVAIEAADVVLMRNDLND  513 (562)
T ss_pred             EeCCCccHHHHhhCCEE---EEeCCc-CHHHHhhCCEEEeCCCHHH
Confidence            99999999999999964   333332 3444557899885  5555

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=99.04  E-value=2.4e-09  Score=79.10  Aligned_cols=103  Identities=17%  Similarity=0.300  Sum_probs=64.6

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHH-------HHHHHHHhc-CCCCcceEEEecCCCCCCCCChHHHHHHHHH
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRE-------NAELMISKL-GLSDFFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~-------~~~~~l~~~-~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      ...+|.||+.++|++|++.|..++++|+.+..       .....+++. +... ++.++.+..    |.          .
T Consensus        70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~-~~~~~~~~~----K~----------~  134 (191)
T PF06941_consen   70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIP-YDNLIFTGD----KT----------L  134 (191)
T ss_dssp             TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHH-HCCEEEESS----GG----------G
T ss_pred             cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCc-hheEEEecC----CC----------e
Confidence            46789999999999999999777777766432       334455543 3222 233443321    11          1


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCC
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD  230 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~e  230 (246)
                      ++.    =++|+|++..+..+...|++++++..++++...    ....+.++.|
T Consensus       135 v~~----DvlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~----~~~Rv~~W~e  180 (191)
T PF06941_consen  135 VGG----DVLIDDRPHNLEQFANAGIPVILFDQPYNRDES----NFPRVNNWEE  180 (191)
T ss_dssp             C------SEEEESSSHHHSS-SSESSEEEEE--GGGTT------TSEEE-STTS
T ss_pred             Eec----cEEecCChHHHHhccCCCceEEEEcCCCCCCCC----CCccCCCHHH
Confidence            111    289999999999999999999999988777543    5689999999

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=99.03  E-value=3.4e-09  Score=70.17  Aligned_cols=121  Identities=15%  Similarity=0.174  Sum_probs=97.4

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      .-++|+.+.+.+++|++. +.++|.|+.-...+...++..|+.  .+.++       .-.++.....++++++-+.+.|+
T Consensus        28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~--~~rv~-------a~a~~e~K~~ii~eLkk~~~k~v   97 (152)
T COG4087          28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP--VERVF-------AGADPEMKAKIIRELKKRYEKVV   97 (152)
T ss_pred             CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc--eeeee-------cccCHHHHHHHHHHhcCCCcEEE
Confidence            457899999999999999 999999999888999988888876  33332       22356677889999988779999


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhh
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      +|||+.||+.+.+++.+..+-+..++..+... ..+|++++++.|  .+.++..
T Consensus        98 mVGnGaND~laLr~ADlGI~tiq~e~v~~r~l-~~ADvvik~i~e--~ldl~~~  148 (152)
T COG4087          98 MVGNGANDILALREADLGICTIQQEGVPERLL-LTADVVLKEIAE--ILDLLKD  148 (152)
T ss_pred             EecCCcchHHHhhhcccceEEeccCCcchHHH-hhchhhhhhHHH--HHHHhhc
Confidence            99999999999999999888887655444433 478999999998  6665543

>PRK10671 copA copper exporting ATPase; Provisional

Probab=99.01  E-value=2.9e-09  Score=95.23  Aligned_cols=113  Identities=14%  Similarity=0.160  Sum_probs=84.9

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF  187 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i  187 (246)
                      +++|++.+.|++|++.|++++++|+.+....+..++++|+.++|..+           .|+....++++++..+++++||
T Consensus       650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~-----------~p~~K~~~i~~l~~~~~~v~~v  718 (834)
T PRK10671        650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV-----------LPDGKAEAIKRLQSQGRQVAMV  718 (834)
T ss_pred             cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC-----------CHHHHHHHHHHHhhcCCEEEEE
Confidence            57899999999999999999999999999999999999998655432           1333456777888888999999


Q ss_pred             ecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEe--cCCCChhhHHHH
Q 025896          188 EDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLI--KDYDDPKLWSAL  237 (246)
Q Consensus       188 gD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~~~l  237 (246)
                      ||+.||+.+++.+|+..   ..++..+. ....+|+++  +++.+  +..++
T Consensus       719 GDg~nD~~al~~Agvgi---a~g~g~~~-a~~~ad~vl~~~~~~~--i~~~i  764 (834)
T PRK10671        719 GDGINDAPALAQADVGI---AMGGGSDV-AIETAAITLMRHSLMG--VADAL  764 (834)
T ss_pred             eCCHHHHHHHHhCCeeE---EecCCCHH-HHHhCCEEEecCCHHH--HHHHH
Confidence            99999999999999843   33332222 223455554  45555  44444

>COG4996 Predicted phosphatase [General function prediction only]

Probab=99.01  E-value=2e-09  Score=71.13  Aligned_cols=87  Identities=14%  Similarity=0.284  Sum_probs=70.1

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHH---HHHHHc-----
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYF---KALEML-----  177 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~---~~~~~~-----  177 (246)
                      .+.++|.+.+++.++|..|+-+...|=+....+-+.|+.+++.++|+-++       .+|+|.-++   +++.++     
T Consensus        39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~V-------iePhP~K~~ML~~llr~i~~er~  111 (164)
T COG4996          39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIV-------IEPHPYKFLMLSQLLREINTERN  111 (164)
T ss_pred             EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEE-------ecCCChhHHHHHHHHHHHHHhhc
Confidence            47899999999999999999999999998889999999999999999765       445554333   444443     


Q ss_pred             -CCCCCcEEEEecChhhhHHHHh
Q 025896          178 -KVSKDHTFVFEDSVSGIKAGVA  199 (246)
Q Consensus       178 -~~~~~~~~~igD~~~Di~~a~~  199 (246)
                       .++|.+++|++|..-.+.-.+.
T Consensus       112 ~~ikP~~Ivy~DDR~iH~~~Iwe  134 (164)
T COG4996         112 QKIKPSEIVYLDDRRIHFGNIWE  134 (164)
T ss_pred             cccCcceEEEEecccccHHHHHH
Confidence             4689999999999866655544

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=98.97  E-value=1.8e-09  Score=91.65  Aligned_cols=49  Identities=12%  Similarity=0.076  Sum_probs=42.0

Q ss_pred             CCCChHHHHHHHHHcCCCCCcEEEE--ecChhhhHHHHhcCCCEEEEcCCC
Q 025896          163 AKPFPDPYFKALEMLKVSKDHTFVF--EDSVSGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~~~~~~~~i--gD~~~Di~~a~~~G~~~i~v~~~~  211 (246)
                      ...|..+++.+++.++++.++++.|  ||+.||++|.+.+|.++++-...+
T Consensus       611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~~  661 (694)
T PRK14502        611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPGN  661 (694)
T ss_pred             CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCCC
Confidence            5667889999999999999999988  999999999999999877644333

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=98.96  E-value=6.7e-10  Score=83.99  Aligned_cols=43  Identities=12%  Similarity=0.072  Sum_probs=36.2

Q ss_pred             CCCChHHHHHHHHHcCC--CCCcEEEEecChhhhHHHHhcCCCEE
Q 025896          163 AKPFPDPYFKALEMLKV--SKDHTFVFEDSVSGIKAGVAAGLPVV  205 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~--~~~~~~~igD~~~Di~~a~~~G~~~i  205 (246)
                      ...++.+++.+++.+++  +++++++|||+.||+.|++.+|++++
T Consensus       179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~  223 (225)
T TIGR02461       179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL  223 (225)
T ss_pred             CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence            44566788888888866  67789999999999999999998754

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=98.92  E-value=3.7e-09  Score=82.01  Aligned_cols=71  Identities=14%  Similarity=0.204  Sum_probs=54.7

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc----CCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHH
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAA----GLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSA  236 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~----G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~  236 (246)
                      ..+..|..+++++++.++++.+++++|||+.||+.|.+.+    |+ .+.+..+       ...|.+.+++..+  +..+
T Consensus       170 p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~-~vavg~a-------~~~A~~~l~~~~~--v~~~  239 (266)
T PRK10187        170 PRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGI-SVKVGTG-------ATQASWRLAGVPD--VWSW  239 (266)
T ss_pred             CCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCe-EEEECCC-------CCcCeEeCCCHHH--HHHH
Confidence            4455678899999999999999999999999999999988    54 3444221       1357789998888  6666


Q ss_pred             Hhhhh
Q 025896          237 LEELD  241 (246)
Q Consensus       237 l~~~~  241 (246)
                      |+.+.
T Consensus       240 L~~l~  244 (266)
T PRK10187        240 LEMIT  244 (266)
T ss_pred             HHHHH
Confidence            66554

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=98.90  E-value=1.1e-07  Score=69.35  Aligned_cols=123  Identities=11%  Similarity=0.029  Sum_probs=93.6

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcC---CCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLG---LSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~---l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      ...++++.+.++..+..|++++|+|+++...+...+...+   +..++++.+..  .-..|-....|..+.+.+|.++.+
T Consensus       122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt--~iG~K~e~~sy~~I~~~Ig~s~~e  199 (254)
T KOG2630|consen  122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT--TIGLKVESQSYKKIGHLIGKSPRE  199 (254)
T ss_pred             ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc--cccceehhHHHHHHHHHhCCChhh
Confidence            4689999999999999999999999998877776665542   33334433322  123556778899999999999999


Q ss_pred             EEEEecChhhhHHHHhcCCCEEEEcCCCChhhhh-ccCCcEEecCCCCh
Q 025896          184 TFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLL-EANPTFLIKDYDDP  231 (246)
Q Consensus       184 ~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~-~~~~~~~i~~~~el  231 (246)
                      ++|.-|...-..+|+.+|+.+..+.++++..-.. ..-..-++.+|..+
T Consensus       200 iLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l  248 (254)
T KOG2630|consen  200 ILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEIL  248 (254)
T ss_pred             eEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhh
Confidence            9999999999999999999999998885443222 12224577787764

>TIGR01675 plant-AP plant acid phosphatase

Probab=98.88  E-value=1.4e-07  Score=70.52  Aligned_cols=101  Identities=14%  Similarity=0.009  Sum_probs=64.0

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHH---HHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCC
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN---AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSK  181 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~  181 (246)
                      ...++.|++.++++.++++|+.|+++|+.+...   ....|.+.|+..+ +.++........++.........+++--..
T Consensus       117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~G  195 (229)
T TIGR01675       117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEG  195 (229)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCC
Confidence            457889999999999999999999999998655   6677888887764 555543322222221111112222221111


Q ss_pred             -CcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          182 -DHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       182 -~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                       .=+..|||..+|+.. ..+|..+.-+
T Consensus       196 YrIv~~iGDq~sDl~G-~~~~~RtFKL  221 (229)
T TIGR01675       196 YRIWGNIGDQWSDLLG-SPPGRRTFKL  221 (229)
T ss_pred             ceEEEEECCChHHhcC-CCccCceeeC
Confidence             226789999999955 3455454444

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=98.87  E-value=1.6e-09  Score=80.89  Aligned_cols=45  Identities=22%  Similarity=0.159  Sum_probs=41.7

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEE
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVV  205 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i  205 (246)
                      ..+.+++.+++.++++++++++++++|||+.||+.|++.+|++++
T Consensus       159 p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va  203 (204)
T TIGR01484       159 PAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA  203 (204)
T ss_pred             cCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence            567888999999999999999999999999999999999998765

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR00685 T6PP trehalose-phosphatase

Probab=98.86  E-value=2.2e-09  Score=82.40  Aligned_cols=70  Identities=13%  Similarity=-0.013  Sum_probs=56.0

Q ss_pred             CCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc-------CCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHH
Q 025896          164 KPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAA-------GLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSA  236 (246)
Q Consensus       164 kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~-------G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~  236 (246)
                      ..|...++.++++++..+.++++|||+.||+.|++.+       |..++.+..+     .....+++++++..+  +..+
T Consensus       166 ~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g-----~~~~~A~~~~~~~~~--v~~~  238 (244)
T TIGR00685       166 VNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG-----SKKTVAKFHLTGPQQ--VLEF  238 (244)
T ss_pred             CCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC-----CcCCCceEeCCCHHH--HHHH
Confidence            3356899999999999999999999999999999998       5566667433     233578999999999  6666


Q ss_pred             Hhhh
Q 025896          237 LEEL  240 (246)
Q Consensus       237 l~~~  240 (246)
                      |+.+
T Consensus       239 L~~l  242 (244)
T TIGR00685       239 LGLL  242 (244)
T ss_pred             HHHH
Confidence            6654

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PLN02382 probable sucrose-phosphatase

Probab=98.80  E-value=4.6e-08  Score=80.40  Aligned_cols=82  Identities=15%  Similarity=0.106  Sum_probs=58.5

Q ss_pred             CCCCCChHHHHHHHHHc---CCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhc-------cCCcEE-ecCCC
Q 025896          161 ERAKPFPDPYFKALEML---KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE-------ANPTFL-IKDYD  229 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~---~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~-------~~~~~~-i~~~~  229 (246)
                      ..+..|..+++.+++++   |++++++++|||+.||++|.+.+|...+.+.+.  .++..+       ..++++ .++..
T Consensus       171 p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA--~~elk~~a~~~~~~~~~~~~a~~~~  248 (413)
T PLN02382        171 PQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA--QEELLQWYAENAKDNPKIIHATERC  248 (413)
T ss_pred             eCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC--cHHHHHHHHhhccCCCcEEEcCCCC
Confidence            45666788999999999   999999999999999999999999533444332  222222       123443 35667


Q ss_pred             ChhhHHHHhhhhcCC
Q 025896          230 DPKLWSALEELDKNK  244 (246)
Q Consensus       230 el~~~~~l~~~~~~~  244 (246)
                      +-++...++.+.-.|
T Consensus       249 ~~GI~~al~~f~l~~  263 (413)
T PLN02382        249 AAGIIQAIGHFNLGP  263 (413)
T ss_pred             ccHHHHHHHHhCCCC
Confidence            778888887776543

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=98.78  E-value=1e-07  Score=84.15  Aligned_cols=102  Identities=14%  Similarity=0.084  Sum_probs=75.4

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF  187 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i  187 (246)
                      +++|++.+.+++|++.|++++++|+.+....+.+.+++|+..+++          ..|  +-...++++++ .+++++||
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~----------~~p--~~K~~~v~~l~-~~~~v~mv  634 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG----------LLP--EDKVKAVTELN-QHAPLAMV  634 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC----------CCH--HHHHHHHHHHh-cCCCEEEE
Confidence            688999999999999999999999999999999999999962221          112  22233555555 34689999


Q ss_pred             ecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEec
Q 025896          188 EDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIK  226 (246)
Q Consensus       188 gD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~  226 (246)
                      ||+.||..+++.+++...+-   +.. +.....+|+++-
T Consensus       635 GDgiNDapAl~~A~vgia~g---~~~-~~a~~~adivl~  669 (741)
T PRK11033        635 GDGINDAPAMKAASIGIAMG---SGT-DVALETADAALT  669 (741)
T ss_pred             ECCHHhHHHHHhCCeeEEec---CCC-HHHHHhCCEEEe
Confidence            99999999999999654443   222 222334677664

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=98.77  E-value=2.9e-07  Score=77.04  Aligned_cols=93  Identities=11%  Similarity=-0.046  Sum_probs=58.0

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHh-cCCCCcc--------eEEEecCCCCCC-CCChHHHHHHHHHcC
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISK-LGLSDFF--------QVVILGDECERA-KPFPDPYFKALEMLK  178 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~-~~l~~~f--------~~~~~~~~~~~~-kp~~~~~~~~~~~~~  178 (246)
                      +.+.+.+   .++++|.. +|+|.......+.+++. +|++...        ++.+++...+.. .-..+-..++-+.++
T Consensus       111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g  186 (497)
T PLN02177        111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFG  186 (497)
T ss_pred             cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHhC
Confidence            4455444   44567754 99999999999999976 7876432        333333322210 111223444545566


Q ss_pred             CCCCcEEEEecChhhhHHHHhcCCCEEE
Q 025896          179 VSKDHTFVFEDSVSGIKAGVAAGLPVVG  206 (246)
Q Consensus       179 ~~~~~~~~igD~~~Di~~a~~~G~~~i~  206 (246)
                      .+... +++||+.+|..+...++-+.+.
T Consensus       187 ~~~~~-~aYgDS~sD~plL~~a~e~y~V  213 (497)
T PLN02177        187 DALPD-LGLGDRETDHDFMSICKEGYMV  213 (497)
T ss_pred             CCCce-EEEECCccHHHHHHhCCccEEe
Confidence            54444 8999999999999999965333

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=98.74  E-value=8.5e-08  Score=86.61  Aligned_cols=119  Identities=14%  Similarity=0.165  Sum_probs=86.6

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCc----ceEEEecCC----------------CCCCCCCh
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF----FQVVILGDE----------------CERAKPFP  167 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~----f~~~~~~~~----------------~~~~kp~~  167 (246)
                      ++++++.+.++.|++.|++++++|+.+...+..+.+.+|+..-    ....+.+..                .-.....|
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P  616 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP  616 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence            5789999999999999999999999999999999999998531    111222111                11122334


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecC--CCC
Q 025896          168 DPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD--YDD  230 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~--~~e  230 (246)
                      +-..++.+.++...+.+.|+||+.||+.|.+.|++...+- .+   .+..+..+|+++.+  +..
T Consensus       617 ~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g---~~~ak~aAD~vl~dd~f~~  677 (917)
T TIGR01116       617 SHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SG---TEVAKEASDMVLADDNFAT  677 (917)
T ss_pred             HHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CC---cHHHHHhcCeEEccCCHHH
Confidence            5556777777766778889999999999999999854332 22   34445678999987  555

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=98.71  E-value=6.2e-08  Score=74.34  Aligned_cols=77  Identities=13%  Similarity=0.110  Sum_probs=47.3

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh-----hhhhccC-CcEEecCCCChhhH
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE-----HVLLEAN-PTFLIKDYDDPKLW  234 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-----~~~~~~~-~~~~i~~~~el~~~  234 (246)
                      +..-.|..+++.+++++++++++++++|||.||+.|. ..+...+.|.+....     .+..... .-|........+++
T Consensus       161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIl  239 (247)
T PF05116_consen  161 PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGIL  239 (247)
T ss_dssp             ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHH
T ss_pred             cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHH
Confidence            4455578899999999999999999999999999999 666677877554322     1111111 22555555555565


Q ss_pred             HHHh
Q 025896          235 SALE  238 (246)
Q Consensus       235 ~~l~  238 (246)
                      +.++
T Consensus       240 egl~  243 (247)
T PF05116_consen  240 EGLQ  243 (247)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5554

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=98.68  E-value=2.4e-08  Score=75.47  Aligned_cols=99  Identities=15%  Similarity=0.175  Sum_probs=62.4

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHH---HHHHHHHhcCCCCcceEEEecCCCCCC---C-CChHHHHHHHHH-c
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRE---NAELMISKLGLSDFFQVVILGDECERA---K-PFPDPYFKALEM-L  177 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~---k-p~~~~~~~~~~~-~  177 (246)
                      ..++.|++.++++.++++|+.|+++|+++..   .....|.+.|...+-..++........   . -+......+.++ +
T Consensus       113 ~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy  192 (229)
T PF03767_consen  113 KAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGY  192 (229)
T ss_dssp             GGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTE
T ss_pred             cCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCC
Confidence            3478899999999999999999999998654   456677788876433333333221111   1 122333334444 3


Q ss_pred             CCCCCcEEEEecChhhhHHHHhc---CCCEEEEc
Q 025896          178 KVSKDHTFVFEDSVSGIKAGVAA---GLPVVGLT  208 (246)
Q Consensus       178 ~~~~~~~~~igD~~~Di~~a~~~---G~~~i~v~  208 (246)
                      .+    +++|||..+|+..++..   |..++.+.
T Consensus       193 ~I----i~~iGD~~~D~~~~~~~~~~~~r~f~lP  222 (229)
T PF03767_consen  193 RI----IANIGDQLSDFSGAKTAGARAERWFKLP  222 (229)
T ss_dssp             EE----EEEEESSGGGCHCTHHHHHHHTTEEE-T
T ss_pred             cE----EEEeCCCHHHhhcccccccccceEEEcC
Confidence            33    88999999999995443   33444443

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=98.68  E-value=5.9e-07  Score=74.00  Aligned_cols=103  Identities=19%  Similarity=0.260  Sum_probs=70.5

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc-C--------CCCcceEEEecCC-----------------CC
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL-G--------LSDFFQVVILGDE-----------------CE  161 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~-~--------l~~~f~~~~~~~~-----------------~~  161 (246)
                      ...|.+..+|++||++|.++.++||++..+....+..+ |        +.++||.|++...                 .+
T Consensus       183 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g  262 (448)
T PF05761_consen  183 HKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETG  262 (448)
T ss_dssp             E--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTS
T ss_pred             cCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCC
Confidence            34678999999999999999999999999888888764 2        4589999887521                 01


Q ss_pred             C---CC------C----ChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhc-CCCEEEEcCC
Q 025896          162 R---AK------P----FPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAA-GLPVVGLTTR  210 (246)
Q Consensus       162 ~---~k------p----~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~-G~~~i~v~~~  210 (246)
                      .   .+      +    .......+.+.+|....++++|||+. .|+...+.. |+.+++|-..
T Consensus       263 ~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E  326 (448)
T PF05761_consen  263 KLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE  326 (448)
T ss_dssp             SEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred             ccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence            1   00      0    01225667778899889999999999 899877776 9999999544

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=98.68  E-value=1.7e-07  Score=81.02  Aligned_cols=105  Identities=15%  Similarity=0.153  Sum_probs=79.8

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF  187 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i  187 (246)
                      ++.|++.+.+++|++.|++++++|+.+......+.+.+|+.+++.         ..  .|+-...+++.+.-..+.+.|+
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a---------~~--~PedK~~~v~~lq~~g~~Vamv  514 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIA---------EA--TPEDKIALIRQEQAEGKLVAMT  514 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEc---------CC--CHHHHHHHHHHHHHcCCeEEEE
Confidence            578999999999999999999999999999999999999975432         12  3344445555554445679999


Q ss_pred             ecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecC
Q 025896          188 EDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD  227 (246)
Q Consensus       188 gD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~  227 (246)
                      ||+.||..+.+.+++..++- .+   .+.....++.++-+
T Consensus       515 GDG~NDapAL~~AdvGiAm~-~g---t~~akeaadivLld  550 (675)
T TIGR01497       515 GDGTNDAPALAQADVGVAMN-SG---TQAAKEAANMVDLD  550 (675)
T ss_pred             CCCcchHHHHHhCCEeEEeC-CC---CHHHHHhCCEEECC
Confidence            99999999999999875554 22   33344566777654

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>smart00775 LNS2 LNS2 domain

Probab=98.67  E-value=5.5e-07  Score=64.06  Aligned_cols=93  Identities=19%  Similarity=0.244  Sum_probs=58.3

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHH---HHHHHhc-----CCCCcceEEEecCCC---------CCCCC---ChH
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENA---ELMISKL-----GLSDFFQVVILGDEC---------ERAKP---FPD  168 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~---~~~l~~~-----~l~~~f~~~~~~~~~---------~~~kp---~~~  168 (246)
                      ..|++.+++++++++|++++++|+++....   +..+..+     ++..  ..++.+...         -..+|   +.+
T Consensus        28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~~~~~e~i~~~~~~~K~~  105 (157)
T smart00775       28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFAALHREVISKKPEVFKIA  105 (157)
T ss_pred             CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence            358899999999999999999999987665   4666662     2321  123332221         11222   223


Q ss_pred             HHHHHHHHcCCCCCc-EEEEecChhhhHHHHhcCCC
Q 025896          169 PYFKALEMLKVSKDH-TFVFEDSVSGIKAGVAAGLP  203 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~-~~~igD~~~Di~~a~~~G~~  203 (246)
                      .+..+.+.+.-.... ++.+||+.+|+.+=+++|++
T Consensus       106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~  141 (157)
T smart00775      106 CLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP  141 (157)
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence            344444433211222 34588889999999999996

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=98.66  E-value=2.6e-07  Score=79.94  Aligned_cols=105  Identities=11%  Similarity=0.101  Sum_probs=82.5

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF  187 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i  187 (246)
                      ++.|++.+.+++||+.|+++.++|+.+...+..+.+.+|+.++|.           .-.|+-..++.+.++-+-+.+.|+
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A-----------~~~PedK~~iV~~lQ~~G~~VaMt  509 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVA-----------ECKPEDKINVIREEQAKGHIVAMT  509 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEc-----------CCCHHHHHHHHHHHHhCCCEEEEE
Confidence            578999999999999999999999999999999999999975332           124555667777776666779999


Q ss_pred             ecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecC
Q 025896          188 EDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD  227 (246)
Q Consensus       188 gD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~  227 (246)
                      ||+.||..+.+.|.+...+- .|   .+.....+|.++-+
T Consensus       510 GDGvNDAPALa~ADVGIAMg-sG---TdvAkeAADiVLld  545 (673)
T PRK14010        510 GDGTNDAPALAEANVGLAMN-SG---TMSAKEAANLIDLD  545 (673)
T ss_pred             CCChhhHHHHHhCCEEEEeC-CC---CHHHHHhCCEEEcC
Confidence            99999999999999754444 33   23444567777754

>PTZ00174 phosphomannomutase; Provisional

Probab=98.66  E-value=1.7e-09  Score=83.15  Aligned_cols=46  Identities=4%  Similarity=-0.217  Sum_probs=38.4

Q ss_pred             CCCCCCCChHHHHHHHHHcCCCCCcEEEEec----ChhhhHHHHhcCCCEEEEc
Q 025896          159 ECERAKPFPDPYFKALEMLKVSKDHTFVFED----SVSGIKAGVAAGLPVVGLT  208 (246)
Q Consensus       159 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD----~~~Di~~a~~~G~~~i~v~  208 (246)
                      ....+..+..+++.+++.    ++++++|||    +.||++|.+.++...+.|.
T Consensus       182 I~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~  231 (247)
T PTZ00174        182 VFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK  231 (247)
T ss_pred             eeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence            345566778889888888    599999999    8999999998888777775

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.65  E-value=4.5e-07  Score=69.87  Aligned_cols=45  Identities=11%  Similarity=-0.131  Sum_probs=35.3

Q ss_pred             CCCChHHHHHHHHHcCCC--CCcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          163 AKPFPDPYFKALEMLKVS--KDHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~~--~~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      ..++..+.+.+.+.++-.  +-.++.+|||+||+.|.+.+.++++.-
T Consensus       206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi~  252 (302)
T PRK12702        206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVLP  252 (302)
T ss_pred             CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEec
Confidence            445677788777777553  447999999999999999999876653

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=98.64  E-value=1.4e-06  Score=66.38  Aligned_cols=103  Identities=14%  Similarity=0.111  Sum_probs=62.7

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHH---HHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHH-H---HHHHc
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRE---NAELMISKLGLSDFFQVVILGDECERAKPFPDPYF-K---ALEML  177 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~-~---~~~~~  177 (246)
                      ...++.|++.++.+.+++.|+.|+++|+.+..   .....|.+.|...+ +..+.-......+.....++ .   -+.+-
T Consensus       142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~e  220 (275)
T TIGR01680       142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQE  220 (275)
T ss_pred             ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence            45788999999999999999999999999753   35566777788654 44444322111211111222 1   11121


Q ss_pred             CCCCCcEEEEecChhhhHHHHhcCCCEEEEcCC
Q 025896          178 KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       178 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~  210 (246)
                      |.  .=+..|||..+|+......+-.+.-+.++
T Consensus       221 GY--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP  251 (275)
T TIGR01680       221 GY--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP  251 (275)
T ss_pred             Cc--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence            22  23678999999996544222345555443

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=98.64  E-value=2.9e-07  Score=79.70  Aligned_cols=105  Identities=13%  Similarity=0.129  Sum_probs=82.1

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF  187 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i  187 (246)
                      ++.||+.+.+++||+.|+++.++|+.+......+.+.+|++++|-           .-.|+-..++.+.++-..+-+.|+
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A-----------~~~PedK~~iV~~lQ~~G~~VaMt  513 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLA-----------EATPEDKLALIRQEQAEGRLVAMT  513 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEc-----------cCCHHHHHHHHHHHHHcCCeEEEE
Confidence            568999999999999999999999999999999999999975322           124555566777766666679999


Q ss_pred             ecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecC
Q 025896          188 EDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD  227 (246)
Q Consensus       188 gD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~  227 (246)
                      ||+.||..+.+.|.+...+- .|.   +.....+|.++-+
T Consensus       514 GDGvNDAPALa~ADVGIAMg-sGT---dvAkeAADiVLld  549 (679)
T PRK01122        514 GDGTNDAPALAQADVGVAMN-SGT---QAAKEAGNMVDLD  549 (679)
T ss_pred             CCCcchHHHHHhCCEeEEeC-CCC---HHHHHhCCEEEeC
Confidence            99999999999999765554 333   3344567777754

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.62  E-value=5e-07  Score=59.24  Aligned_cols=85  Identities=19%  Similarity=0.166  Sum_probs=55.4

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCH---HHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPR---ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      ..++||+.++|++|+++|.+++++||++.   ......|+.+|+.--.+.++++.         ......+++. ....+
T Consensus        13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~---------~~~~~~l~~~-~~~~~   82 (101)
T PF13344_consen   13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG---------MAAAEYLKEH-KGGKK   82 (101)
T ss_dssp             TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH---------HHHHHHHHHH-TTSSE
T ss_pred             CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH---------HHHHHHHHhc-CCCCE
Confidence            45789999999999999999999999864   45666778889874445565543         2233444442 33466


Q ss_pred             EEEEecChhhhHHHHhcCC
Q 025896          184 TFVFEDSVSGIKAGVAAGL  202 (246)
Q Consensus       184 ~~~igD~~~Di~~a~~~G~  202 (246)
                      +.++|-. ...+.++++|+
T Consensus        83 v~vlG~~-~l~~~l~~~G~  100 (101)
T PF13344_consen   83 VYVLGSD-GLREELREAGF  100 (101)
T ss_dssp             EEEES-H-HHHHHHHHTTE
T ss_pred             EEEEcCH-HHHHHHHHcCC
Confidence            7777754 55666666664

...

>PLN02423 phosphomannomutase

Probab=98.54  E-value=1.3e-08  Score=78.02  Aligned_cols=46  Identities=9%  Similarity=-0.185  Sum_probs=37.7

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEec----ChhhhHHHHhcCCCEEEEcCC
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFED----SVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD----~~~Di~~a~~~G~~~i~v~~~  210 (246)
                      +..+..|..+++.++     +++++++|||    +.||++|.+..|+.++-|..+
T Consensus       184 ~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~  233 (245)
T PLN02423        184 FPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSP  233 (245)
T ss_pred             eeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCH
Confidence            355666666666666     8999999999    799999999999999999654

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.54  E-value=7.3e-07  Score=77.41  Aligned_cols=106  Identities=13%  Similarity=0.144  Sum_probs=80.7

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV  186 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  186 (246)
                      ..+.|++.+.+++||+.|+++.++|+.+....+.+.+++|+++++-.+           .|+-.....+++.-.-..++|
T Consensus       536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Ael-----------lPedK~~~V~~l~~~g~~Vam  604 (713)
T COG2217         536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAEL-----------LPEDKAEIVRELQAEGRKVAM  604 (713)
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccC-----------CcHHHHHHHHHHHhcCCEEEE
Confidence            367899999999999999999999999999999999999997654432           233344566666655578999


Q ss_pred             EecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecC
Q 025896          187 FEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD  227 (246)
Q Consensus       187 igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~  227 (246)
                      |||+.||..+...+.+...+-. |   .+.....+|.++=+
T Consensus       605 VGDGINDAPALA~AdVGiAmG~-G---tDvA~eaADvvL~~  641 (713)
T COG2217         605 VGDGINDAPALAAADVGIAMGS-G---TDVAIEAADVVLMR  641 (713)
T ss_pred             EeCCchhHHHHhhcCeeEeecC-C---cHHHHHhCCEEEec
Confidence            9999999999999997644442 2   23333467776654

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=98.51  E-value=1.5e-06  Score=77.17  Aligned_cols=114  Identities=16%  Similarity=0.142  Sum_probs=84.1

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC----------------------CCCCC
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC----------------------ERAKP  165 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~----------------------~~~kp  165 (246)
                      ++.|++.+.+++||+.|+++.++|+.+...+..+.+++|+.+.   ++++++.                      ....-
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~  518 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV  518 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence            6789999999999999999999999999999999999999641   1111110                      11223


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCC
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDY  228 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~  228 (246)
                      .|+-..++.+.++-..+.+.|+||+.||..+.+.|.+...+- .+   .+.....+|.++-+-
T Consensus       519 ~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~g---tdvAkeaADivLl~d  577 (755)
T TIGR01647       519 FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GA---TDAARSAADIVLTEP  577 (755)
T ss_pred             CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CC---cHHHHHhCCEEEEcC
Confidence            455556667777666677999999999999999999875543 32   344456778877543

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=98.49  E-value=1.3e-06  Score=79.33  Aligned_cols=120  Identities=15%  Similarity=0.106  Sum_probs=85.9

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC----------------CCCCCChHHHH
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC----------------ERAKPFPDPYF  171 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~----------------~~~kp~~~~~~  171 (246)
                      ++.|++.+.+++|++.|++++++|+.+...+..+.+.+|+.+--..++.+.+.                -...-.|+-..
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~  658 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQ  658 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHH
Confidence            67889999999999999999999999999999999999986322223332221                11223455556


Q ss_pred             HHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEec--CCCC
Q 025896          172 KALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIK--DYDD  230 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~--~~~e  230 (246)
                      ++.+.+.-..+.+.|+||+.||..+.++|.++..+-..+   .+.....+|+++-  ++..
T Consensus       659 ~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~g---tdvAk~aADivL~dd~f~~  716 (941)
T TIGR01517       659 LLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISG---TEVAKEASDIILLDDNFAS  716 (941)
T ss_pred             HHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCc---cHHHHHhCCEEEecCCHHH
Confidence            666666555567999999999999999999765542122   3334567888887  4444

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=98.48  E-value=1.6e-06  Score=78.15  Aligned_cols=114  Identities=14%  Similarity=0.129  Sum_probs=84.5

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC----------------CCCCCChHHHH
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC----------------ERAKPFPDPYF  171 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~----------------~~~kp~~~~~~  171 (246)
                      ++.|++.+.+++||+.|+++.++|+.+...+..+.+.+|+..  +.++++.+.                -...-.|+-..
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~  627 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS  627 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH
Confidence            678999999999999999999999999999999999999952  222322221                11223455566


Q ss_pred             HHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecC
Q 025896          172 KALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD  227 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~  227 (246)
                      ++.+.+.-..+.+.|+||+.||..+.+.|.+...+- .|   .+.....+|.++-+
T Consensus       628 ~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~g---tdvAkeaADiVLld  679 (903)
T PRK15122        628 RVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SG---ADIAKESADIILLE  679 (903)
T ss_pred             HHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cc---cHHHHHhcCEEEec
Confidence            677777666677999999999999999999764443 32   34455678888854

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=98.48  E-value=1.5e-06  Score=78.12  Aligned_cols=114  Identities=12%  Similarity=0.129  Sum_probs=83.2

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC----------------CCCCCChHHHH
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC----------------ERAKPFPDPYF  171 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~----------------~~~kp~~~~~~  171 (246)
                      ++.|++.+.+++|++.|+++.++|+.+...+..+.+++|+..  +.++++.+.                -...-.|+-..
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~  592 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKS  592 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence            578999999999999999999999999999999999999962  122322211                11222445555


Q ss_pred             HHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecC
Q 025896          172 KALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD  227 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~  227 (246)
                      ++.+.+.-..+.+.|+||+.||..+.+.|+++..+- .+   .+.....+|.++-+
T Consensus       593 ~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~g---tdvAk~aADiVLld  644 (867)
T TIGR01524       593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TA---ADIAKEASDIILLE  644 (867)
T ss_pred             HHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-Cc---cHHHHHhCCEEEec
Confidence            666666555567999999999999999999765543 33   34445678887754

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=98.48  E-value=1.6e-06  Score=79.27  Aligned_cols=120  Identities=15%  Similarity=0.158  Sum_probs=86.4

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCc----------ceEEEecCCCC----------------
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF----------FQVVILGDECE----------------  161 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~----------f~~~~~~~~~~----------------  161 (246)
                      ++.|++.+.++.|++.|++++++|+.+...+..+.+.+|+.+-          -..++++.+..                
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V  725 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV  725 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence            6789999999999999999999999999999999999999531          01233332211                


Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecC--CCC
Q 025896          162 RAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD--YDD  230 (246)
Q Consensus       162 ~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~--~~e  230 (246)
                      ...-.|+-..++.+.+.-..+.+.|+||+.||..|.+.|+++..+-..+   .+.....+|+++.+  +..
T Consensus       726 ~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~g---t~vak~aADivl~dd~f~~  793 (1053)
T TIGR01523       726 IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGING---SDVAKDASDIVLSDDNFAS  793 (1053)
T ss_pred             EEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCc---cHHHHHhcCEEEecCCHHH
Confidence            1223455555666666655677999999999999999999775542222   23345678888865  554

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=98.47  E-value=1.7e-06  Score=77.91  Aligned_cols=115  Identities=15%  Similarity=0.112  Sum_probs=85.2

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC----------------CCCCCChHHH
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC----------------ERAKPFPDPY  170 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~----------------~~~kp~~~~~  170 (246)
                      .++.|++.+.+++|++.|+++.++|+.+...+..+.+++|+..  +.++++.+.                -...-.|+-.
T Consensus       549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K  626 (902)
T PRK10517        549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMHK  626 (902)
T ss_pred             CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence            3578999999999999999999999999999999999999952  233333221                1122345556


Q ss_pred             HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecC
Q 025896          171 FKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD  227 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~  227 (246)
                      .++.+.+.-..+.+.|+||+.||..+.+.|.+...+- .+   .+.....+|.++-+
T Consensus       627 ~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~g---tdvAkeaADiVLld  679 (902)
T PRK10517        627 ERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GA---VDIAREAADIILLE  679 (902)
T ss_pred             HHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-Cc---CHHHHHhCCEEEec
Confidence            6666766656667899999999999999999765443 33   34455678888864

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=98.44  E-value=3.1e-05  Score=59.43  Aligned_cols=104  Identities=15%  Similarity=0.249  Sum_probs=74.1

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH---HhcCCC--Cc-c--eEEE----e-c---------CC--CCCC
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI---SKLGLS--DF-F--QVVI----L-G---------DE--CERA  163 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l---~~~~l~--~~-f--~~~~----~-~---------~~--~~~~  163 (246)
                      ..-+.+.++++.|++.|+++..+|..+.......+   .++|+.  .. |  +..+    . .         +.  ...+
T Consensus        81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~  160 (252)
T PF11019_consen   81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG  160 (252)
T ss_pred             EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence            34568899999999999999999999876655444   445654  11 1  0000    0 0         00  1234


Q ss_pred             CCChHHHHHHHHHcCCCCCcEEEEecChhhhH----HHHhcCCCEEEEcCCC
Q 025896          164 KPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK----AGVAAGLPVVGLTTRN  211 (246)
Q Consensus       164 kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~----~a~~~G~~~i~v~~~~  211 (246)
                      -++..++..++.+.+..|+.++||+|+..++.    +++..|+.++++....
T Consensus       161 ~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~  212 (252)
T PF11019_consen  161 QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTG  212 (252)
T ss_pred             CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcc
Confidence            55678999999999999999999999998774    4455799988887654

The function is not known.

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=98.43  E-value=2.1e-06  Score=60.34  Aligned_cols=97  Identities=16%  Similarity=0.178  Sum_probs=66.9

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHH---HHH-HhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAE---LMI-SKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKD  182 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~---~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~  182 (246)
                      ..|.+-++.++....++|-.|+.+|+..+...+   ..| +.+.+......++.++   ..||........++..++   
T Consensus       113 SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd---k~k~~qy~Kt~~i~~~~~---  186 (237)
T COG3700         113 SIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD---KPKPGQYTKTQWIQDKNI---  186 (237)
T ss_pred             cchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC---CCCcccccccHHHHhcCc---
Confidence            344455788999999999999999998765433   333 3345654444444333   234444444466776666   


Q ss_pred             cEEEEecChhhhHHHHhcCCCEEEEcCC
Q 025896          183 HTFVFEDSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       183 ~~~~igD~~~Di~~a~~~G~~~i~v~~~  210 (246)
                       -++.|||.+|+-+|+++|...|.+.+-
T Consensus       187 -~IhYGDSD~Di~AAkeaG~RgIRilRA  213 (237)
T COG3700         187 -RIHYGDSDNDITAAKEAGARGIRILRA  213 (237)
T ss_pred             -eEEecCCchhhhHHHhcCccceeEEec
Confidence             589999999999999999998887665

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=98.42  E-value=4.8e-07  Score=80.08  Aligned_cols=72  Identities=11%  Similarity=0.038  Sum_probs=54.0

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      .....|..+++.+++  +++++.+++|||+.||+.|++.++.....+.-|+.     ...+.+++++.+|  +..+|+.+
T Consensus       653 p~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~-----~s~A~~~l~~~~e--V~~~L~~l  723 (726)
T PRK14501        653 PAGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG-----ESRARYRLPSQRE--VRELLRRL  723 (726)
T ss_pred             ECCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCC-----CCcceEeCCCHHH--HHHHHHHH
Confidence            445567788888888  78889999999999999999997532333333332     3578899999888  77777766


Q ss_pred             h
Q 025896          241 D  241 (246)
Q Consensus       241 ~  241 (246)
                      .
T Consensus       724 ~  724 (726)
T PRK14501        724 L  724 (726)
T ss_pred             h
Confidence            4

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=98.42  E-value=3.5e-06  Score=62.32  Aligned_cols=87  Identities=14%  Similarity=0.165  Sum_probs=61.9

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHH----HHHHHHhcCCCCcc-eEEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN----AELMISKLGLSDFF-QVVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~----~~~~l~~~~l~~~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      ...++.||+.+|+.+.-++|..|..+||+....    ...-|.+.|+...- +.++.-   ...+++..-.+.+-+.+  
T Consensus       119 ~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llk---k~~k~Ke~R~~~v~k~~--  193 (274)
T COG2503         119 KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLK---KDKKSKEVRRQAVEKDY--  193 (274)
T ss_pred             cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEe---eCCCcHHHHHHHHhhcc--
Confidence            357899999999999999999999999997755    45667777877543 222222   33555555555555543  


Q ss_pred             CCCcEEEEecChhhhHHHH
Q 025896          180 SKDHTFVFEDSVSGIKAGV  198 (246)
Q Consensus       180 ~~~~~~~igD~~~Di~~a~  198 (246)
                        .-++.|||++.|+-...
T Consensus       194 --~iVm~vGDNl~DF~d~~  210 (274)
T COG2503         194 --KIVMLVGDNLDDFGDNA  210 (274)
T ss_pred             --ceeeEecCchhhhcchh
Confidence              44899999999885443

>PLN02645 phosphoglycolate phosphatase

Probab=98.34  E-value=5.4e-06  Score=66.00  Aligned_cols=90  Identities=20%  Similarity=0.176  Sum_probs=69.7

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAP---RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      .++||+.++|++|+++|++++++||++   .......++.+|+...++.++++..         .....++..+....+.
T Consensus        44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~---------~~~~~l~~~~~~~~~~  114 (311)
T PLN02645         44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSF---------AAAAYLKSINFPKDKK  114 (311)
T ss_pred             ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHH---------HHHHHHHhhccCCCCE
Confidence            367999999999999999999999987   4444556678898766777765532         4456666666655556


Q ss_pred             EEEecChhhhHHHHhcCCCEEE
Q 025896          185 FVFEDSVSGIKAGVAAGLPVVG  206 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~~i~  206 (246)
                      ++++++..+.+.++.+|+.++.
T Consensus       115 V~viG~~~~~~~l~~~Gi~~~~  136 (311)
T PLN02645        115 VYVIGEEGILEELELAGFQYLG  136 (311)
T ss_pred             EEEEcCHHHHHHHHHCCCEEec
Confidence            8888889999999999997654

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.33  E-value=4.6e-06  Score=75.44  Aligned_cols=117  Identities=18%  Similarity=0.150  Sum_probs=85.3

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc--eEEEecCCCC----------------CCCCChH
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF--QVVILGDECE----------------RAKPFPD  168 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~~  168 (246)
                      .+|.+++.+.++.|++.|++++++|+.+...+..+.+++|+..--  +.++.+.+..                ...-.|+
T Consensus       546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~  625 (917)
T COG0474         546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE  625 (917)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence            468899999999999999999999999999999999999987433  2355443321                1222455


Q ss_pred             HHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEec
Q 025896          169 PYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIK  226 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~  226 (246)
                      -..++.+.++-.-+-+.|+||+.||..|.++|.+...+...|...   ....+|.+..
T Consensus       626 qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtda---ak~Aadivl~  680 (917)
T COG0474         626 QKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDA---AKEAADIVLL  680 (917)
T ss_pred             HHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHH---HHhhcceEee
Confidence            555666666656667899999999999999999887666544322   2234555443

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=98.32  E-value=5.7e-06  Score=75.62  Aligned_cols=117  Identities=16%  Similarity=0.100  Sum_probs=82.3

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc------------------------eEEEecCCC---
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF------------------------QVVILGDEC---  160 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f------------------------~~~~~~~~~---  160 (246)
                      ++.|++.+.+++|++.|++++++|+.+...+..+.+.+|+..--                        ..++++.+.   
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l  647 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM  647 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence            56889999999999999999999999999999999999884210                        023332211   


Q ss_pred             ---------------CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEe
Q 025896          161 ---------------ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLI  225 (246)
Q Consensus       161 ---------------~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i  225 (246)
                                     -...-.|+-..++.+.+.-..+.+.++||+.||..|.+.|.++..+-..|   .+.....+|+++
T Consensus       648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G---~~vak~aADivL  724 (997)
T TIGR01106       648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAG---SDVSKQAADMIL  724 (997)
T ss_pred             CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcc---cHHHHHhhceEE
Confidence                           11222444455555555555567899999999999999999765543233   233445788888


Q ss_pred             cC
Q 025896          226 KD  227 (246)
Q Consensus       226 ~~  227 (246)
                      .+
T Consensus       725 ~d  726 (997)
T TIGR01106       725 LD  726 (997)
T ss_pred             ec
Confidence            76

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=98.20  E-value=7.6e-06  Score=58.10  Aligned_cols=86  Identities=15%  Similarity=0.112  Sum_probs=65.5

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC-Ccc-eEEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS-DFF-QVVILGDECERAKPFPDPYFKALEMLKVSKD  182 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~-~~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~  182 (246)
                      ..++++||+.++|++|++. +.++|+|++...++..+++.++.. .+| +.+++.++...  +.   .+.+-.-++.+.+
T Consensus        55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~--~~---~KdL~~i~~~d~~  128 (156)
T TIGR02250        55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGS--PH---TKSLLRLFPADES  128 (156)
T ss_pred             EEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCC--Cc---cccHHHHcCCCcc
Confidence            3578899999999999966 999999999999999999999988 588 66676665431  11   1122234577888


Q ss_pred             cEEEEecChhhhHH
Q 025896          183 HTFVFEDSVSGIKA  196 (246)
Q Consensus       183 ~~~~igD~~~Di~~  196 (246)
                      .+++|+|++.-...
T Consensus       129 ~vvivDd~~~~~~~  142 (156)
T TIGR02250       129 MVVIIDDREDVWPW  142 (156)
T ss_pred             cEEEEeCCHHHhhc
Confidence            99999999854443

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=98.17  E-value=4.8e-05  Score=57.96  Aligned_cols=86  Identities=15%  Similarity=0.176  Sum_probs=66.1

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC-----------------------------
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC-----------------------------  160 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~-----------------------------  160 (246)
                      .|.+.+.|.+||+.|..+++-|-++++....-++++++.++||.+++.+..                             
T Consensus       144 ~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~  223 (297)
T PF05152_consen  144 DPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTN  223 (297)
T ss_pred             ChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCc
Confidence            355678899999999999999999999999999999999999999875421                             


Q ss_pred             CCCCC-ChHHHHHHHHHcCCCCCc-EEEEecCh-hhhH
Q 025896          161 ERAKP-FPDPYFKALEMLKVSKDH-TFVFEDSV-SGIK  195 (246)
Q Consensus       161 ~~~kp-~~~~~~~~~~~~~~~~~~-~~~igD~~-~Di~  195 (246)
                      ....| .|......+++.|+..-+ +..|+|-. ||+.
T Consensus       224 ~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~Nn~~  261 (297)
T PF05152_consen  224 VNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNYS  261 (297)
T ss_pred             CCCCCCCCeehHHHHHHcCCceeeeEEEeccCcccCcc
Confidence            01133 356777888888887744 44677766 6653

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=98.11  E-value=4.1e-05  Score=68.53  Aligned_cols=74  Identities=8%  Similarity=-0.016  Sum_probs=54.2

Q ss_pred             CCCCCChHHHHHHHH---HcCCCCCcEEEEecChhhhHHHHhcCC-------------CEEEEcCCCChhhhhccCCcEE
Q 025896          161 ERAKPFPDPYFKALE---MLKVSKDHTFVFEDSVSGIKAGVAAGL-------------PVVGLTTRNPEHVLLEANPTFL  224 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~---~~~~~~~~~~~igD~~~Di~~a~~~G~-------------~~i~v~~~~~~~~~~~~~~~~~  224 (246)
                      ..+..|..+++.+++   .+|+.++.+++|||..||..|.+.++-             -+|.|  |.     ....|.|.
T Consensus       758 p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~V--G~-----~~S~A~y~  830 (854)
T PLN02205        758 PQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTV--GQ-----KPSKAKYY  830 (854)
T ss_pred             eCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEE--CC-----CCccCeEe
Confidence            345557778888875   468899999999999999999998762             23334  21     12567799


Q ss_pred             ecCCCChhhHHHHhhhhcC
Q 025896          225 IKDYDDPKLWSALEELDKN  243 (246)
Q Consensus       225 i~~~~el~~~~~l~~~~~~  243 (246)
                      +++..|  +..+|+.+...
T Consensus       831 L~d~~e--V~~lL~~L~~~  847 (854)
T PLN02205        831 LDDTAE--IVRLMQGLASV  847 (854)
T ss_pred             cCCHHH--HHHHHHHHHhc
Confidence            999998  77777776653

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=98.05  E-value=4e-05  Score=66.39  Aligned_cols=117  Identities=15%  Similarity=0.196  Sum_probs=85.5

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcce----EEEecCCCC----------------CCCCC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQ----VVILGDECE----------------RAKPF  166 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~----------------~~kp~  166 (246)
                      .+|++++.+.++.|++.|+++..+|+.+...+..+.++.|+...-+    ..+++.+..                ...-.
T Consensus       583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~  662 (972)
T KOG0202|consen  583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE  662 (972)
T ss_pred             CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence            4688999999999999999999999999999999999999865433    233332211                11223


Q ss_pred             hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEec
Q 025896          167 PDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIK  226 (246)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~  226 (246)
                      |.-..++.+.++-..+=+.|-||+.||-.+.+.|.+...+-..|.   +-.+..+|.++.
T Consensus       663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GT---dVaKeAsDMVL~  719 (972)
T KOG0202|consen  663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGT---DVAKEASDMVLA  719 (972)
T ss_pred             chhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCcc---HhhHhhhhcEEe
Confidence            555667777777777778999999999999999997655544443   333345666654

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.05  E-value=5e-05  Score=66.40  Aligned_cols=109  Identities=11%  Similarity=0.110  Sum_probs=77.6

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV  186 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  186 (246)
                      .++.|++...+..||+.|++++++|+.+...++...++.|++    .++ ++    -+|  +-.....+++.-+...++|
T Consensus       722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----~V~-ae----v~P--~~K~~~Ik~lq~~~~~VaM  790 (951)
T KOG0207|consen  722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----NVY-AE----VLP--EQKAEKIKEIQKNGGPVAM  790 (951)
T ss_pred             cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc----eEE-ec----cCc--hhhHHHHHHHHhcCCcEEE
Confidence            467899999999999999999999999999999999999944    333 22    222  2223445555445577999


Q ss_pred             EecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEec--CCCC
Q 025896          187 FEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIK--DYDD  230 (246)
Q Consensus       187 igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~--~~~e  230 (246)
                      |||+.||-.+...+.+..... .|   .+.....+|+++=  ++.+
T Consensus       791 VGDGINDaPALA~AdVGIaig-~g---s~vAieaADIVLmrn~L~~  832 (951)
T KOG0207|consen  791 VGDGINDAPALAQADVGIAIG-AG---SDVAIEAADIVLMRNDLRD  832 (951)
T ss_pred             EeCCCCccHHHHhhccceeec-cc---cHHHHhhCCEEEEccchhh
Confidence            999999999999998764433 22   3333345666553  4444

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=98.03  E-value=4.3e-05  Score=51.90  Aligned_cols=48  Identities=10%  Similarity=0.217  Sum_probs=34.2

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHH---------------HHHHHHhcCCCCcceEEEec
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPREN---------------AELMISKLGLSDFFQVVILG  157 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~---------------~~~~l~~~~l~~~f~~~~~~  157 (246)
                      .+.+++.+.|+++++.|+.++++|+.+...               +..+|.+.++.  +|.++..
T Consensus        24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~~   86 (126)
T TIGR01689        24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYVG   86 (126)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEeC
Confidence            355678889999999999999999987643               34555665664  4555533

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>PLN02580 trehalose-phosphatase

Probab=97.99  E-value=2.3e-05  Score=63.32  Aligned_cols=72  Identities=17%  Similarity=0.089  Sum_probs=52.5

Q ss_pred             CCCChHHHHHHHHHcCCCCCc---EEEEecChhhhHHHHhc-----CCCEEEEcCCCChhhhhccCCcEEecCCCChhhH
Q 025896          163 AKPFPDPYFKALEMLKVSKDH---TFVFEDSVSGIKAGVAA-----GLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLW  234 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~~~~~---~~~igD~~~Di~~a~~~-----G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~  234 (246)
                      ...|..+++.+++.+++...+   .++|||..||..|.+.+     |+. |.+..+.     ....|.|.+++..|  +.
T Consensus       299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vgn~~-----~~t~A~y~L~dp~e--V~  370 (384)
T PLN02580        299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVSSVP-----KESNAFYSLRDPSE--VM  370 (384)
T ss_pred             CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEecCC-----CCccceEEcCCHHH--HH
Confidence            456778899999999987653   38999999999999963     543 4443221     12467899999999  67


Q ss_pred             HHHhhhhc
Q 025896          235 SALEELDK  242 (246)
Q Consensus       235 ~~l~~~~~  242 (246)
                      .+|+.+..
T Consensus       371 ~~L~~L~~  378 (384)
T PLN02580        371 EFLKSLVT  378 (384)
T ss_pred             HHHHHHHH
Confidence            77766544

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=97.99  E-value=8.9e-05  Score=63.11  Aligned_cols=97  Identities=15%  Similarity=0.131  Sum_probs=75.0

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF  187 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i  187 (246)
                      ++.+++.+.+++|++.|++++++|+.+........+.+|+.              ..-.|+-...+.+.+.-....+.++
T Consensus       347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi~--------------~~~~p~~K~~~v~~l~~~g~~v~~v  412 (499)
T TIGR01494       347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGIF--------------ARVTPEEKAALVEALQKKGRVVAMT  412 (499)
T ss_pred             CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCce--------------eccCHHHHHHHHHHHHHCCCEEEEE
Confidence            67899999999999999999999999999999999999861              1124444445555554444779999


Q ss_pred             ecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecC
Q 025896          188 EDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD  227 (246)
Q Consensus       188 gD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~  227 (246)
                      ||+.||..+.+.+++...+.         ....+|.++-+
T Consensus       413 GDg~nD~~al~~Advgia~~---------a~~~adivl~~  443 (499)
T TIGR01494       413 GDGVNDAPALKKADVGIAMG---------AKAAADIVLLD  443 (499)
T ss_pred             CCChhhHHHHHhCCCccccc---------hHHhCCeEEec
Confidence            99999999999998763332         12357888876

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=97.98  E-value=9e-05  Score=51.73  Aligned_cols=97  Identities=13%  Similarity=0.138  Sum_probs=60.9

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC-CcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS-DFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ..+..++...|..+++. .+++.+|.......+....-+-.. -.+|.+...+.  ..|      -.+.+...+    -+
T Consensus        71 ~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g~--h~K------V~~vrth~i----dl  137 (194)
T COG5663          71 ALLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWLFIQNIHYDHLEIVGL--HHK------VEAVRTHNI----DL  137 (194)
T ss_pred             HHHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhcc--ccc------chhhHhhcc----Cc
Confidence            44556677888888887 688888887554433322222111 11344332221  222      124555556    36


Q ss_pred             EEecCh-hhhHHHHhcCCCEEEEcCCCChhhh
Q 025896          186 VFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVL  216 (246)
Q Consensus       186 ~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~  216 (246)
                      |+.|+. |-.+.|+.+|++++.+++.+++.+.
T Consensus       138 f~ed~~~na~~iAk~~~~~vilins~ynRkp~  169 (194)
T COG5663         138 FFEDSHDNAGQIAKNAGIPVILINSPYNRKPA  169 (194)
T ss_pred             cccccCchHHHHHHhcCCcEEEecCcccccch
Confidence            999999 7888889999999999998766554

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=97.97  E-value=2.1e-05  Score=72.57  Aligned_cols=122  Identities=17%  Similarity=0.162  Sum_probs=79.8

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcce-----------------------------------
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQ-----------------------------------  152 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~-----------------------------------  152 (246)
                      ++.+|+.+.++.|++.|++++++|+.....+..+....|+.+--.                                   
T Consensus       631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  710 (1057)
T TIGR01652       631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLG  710 (1057)
T ss_pred             hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhc
Confidence            688999999999999999999999999999998888877643111                                   


Q ss_pred             ------EEEecCCCC----------------------CCCCChHHHHHHHHHcCCC-CCcEEEEecChhhhHHHHhcCCC
Q 025896          153 ------VVILGDECE----------------------RAKPFPDPYFKALEMLKVS-KDHTFVFEDSVSGIKAGVAAGLP  203 (246)
Q Consensus       153 ------~~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~~G~~  203 (246)
                            .++.+....                      ..+-.|.-..++.+.+.-. .+.++++||+.||+.|.++|.++
T Consensus       711 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVG  790 (1057)
T TIGR01652       711 DSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVG  790 (1057)
T ss_pred             cCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCee
Confidence                  122221100                      0011122222233333222 46799999999999999999876


Q ss_pred             EEEEcCCCChhhhhccCCcEEecCCCChh
Q 025896          204 VVGLTTRNPEHVLLEANPTFLIKDYDDPK  232 (246)
Q Consensus       204 ~i~v~~~~~~~~~~~~~~~~~i~~~~el~  232 (246)
                      . ++.... . ......+|+++.++..+.
T Consensus       791 I-gi~g~e-g-~qA~~aaD~~i~~F~~L~  816 (1057)
T TIGR01652       791 V-GISGKE-G-MQAVMASDFAIGQFRFLT  816 (1057)
T ss_pred             e-EecChH-H-HHHHHhhhhhhhhHHHHH
Confidence            5 443221 1 123457899999877743

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=97.95  E-value=0.00014  Score=67.29  Aligned_cols=41  Identities=12%  Similarity=0.110  Sum_probs=38.8

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS  148 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~  148 (246)
                      ++.|++.+.+++|++.|++++++|+.+...+..+.+.+|+.
T Consensus       656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii  696 (1054)
T TIGR01657       656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV  696 (1054)
T ss_pred             CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            68899999999999999999999999999999999999984

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=97.91  E-value=0.00017  Score=50.73  Aligned_cols=93  Identities=19%  Similarity=0.240  Sum_probs=58.3

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHH---HHHHHHHhc-----CCCCcceEE-EecCC-------CCCCCCChHHHH
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRE---NAELMISKL-----GLSDFFQVV-ILGDE-------CERAKPFPDPYF  171 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~---~~~~~l~~~-----~l~~~f~~~-~~~~~-------~~~~kp~~~~~~  171 (246)
                      ...+|+.++.+.++++||++.-+|+.+..   ..+..|...     ++.   ++. +.+.+       ...-..+|+.|+
T Consensus        27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP---~Gpv~~sP~~l~~al~rEvi~~~p~~fK  103 (157)
T PF08235_consen   27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP---DGPVLLSPDSLFSALHREVISKDPEEFK  103 (157)
T ss_pred             hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC---CCCEEECCcchhhhhhccccccChHHHH
Confidence            45678999999999999999999999753   355666655     332   221 22210       011122444444


Q ss_pred             -HHHHHcC-C----CCCcEEEEecChhhhHHHHhcCCC
Q 025896          172 -KALEMLK-V----SKDHTFVFEDSVSGIKAGVAAGLP  203 (246)
Q Consensus       172 -~~~~~~~-~----~~~~~~~igD~~~Di~~a~~~G~~  203 (246)
                       .+|+.+. .    ...=...+|++.+|+.+=+++|++
T Consensus       104 ~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip  141 (157)
T PF08235_consen  104 IACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP  141 (157)
T ss_pred             HHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence             2333331 1    112255789999999999999996

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.91  E-value=0.00016  Score=59.01  Aligned_cols=91  Identities=11%  Similarity=0.111  Sum_probs=71.0

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC----CCCCCChHHHHHHHHHcCCCCC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC----ERAKPFPDPYFKALEMLKVSKD  182 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~----~~~kp~~~~~~~~~~~~~~~~~  182 (246)
                      ..++.....++..|+++|+-++|+|-+....+++.+.++.     |.++.-++.    -...|+.+.++++++++++..+
T Consensus       254 G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~d  328 (574)
T COG3882         254 GEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLD  328 (574)
T ss_pred             chhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCcc
Confidence            3444556788999999999999999999999999888764     222221111    2356888999999999999999


Q ss_pred             cEEEEecChhhhHHHHhcCC
Q 025896          183 HTFVFEDSVSGIKAGVAAGL  202 (246)
Q Consensus       183 ~~~~igD~~~Di~~a~~~G~  202 (246)
                      -.+||+|++-..+--+.-+-
T Consensus       329 SmvFiDD~p~ErE~vk~~~~  348 (574)
T COG3882         329 SMVFIDDNPAERELVKRELP  348 (574)
T ss_pred             ceEEecCCHHHHHHHHhcCc
Confidence            99999999988887777663

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.77  E-value=0.00013  Score=59.17  Aligned_cols=98  Identities=8%  Similarity=0.003  Sum_probs=83.5

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCC--CHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNA--PRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF  187 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~--~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i  187 (246)
                      .....++.+++.++|.+++++|+.  +...++..|..+|.+-.---++.+.+....|.....|..+++.-+++|..++++
T Consensus       101 n~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w~H~  180 (635)
T COG5610         101 NKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKWIHC  180 (635)
T ss_pred             cccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhheEEe
Confidence            334578899999999999999997  456788999998876333336777777788889999999999999999999999


Q ss_pred             ecCh-hhhHHHHhcCCCEEEE
Q 025896          188 EDSV-SGIKAGVAAGLPVVGL  207 (246)
Q Consensus       188 gD~~-~Di~~a~~~G~~~i~v  207 (246)
                      ||+. .|..+++..|+.+.+.
T Consensus       181 GDN~~aD~l~pk~LgI~Tlf~  201 (635)
T COG5610         181 GDNWVADYLKPKNLGISTLFY  201 (635)
T ss_pred             cCchhhhhcCccccchhHHHH
Confidence            9999 8999999999998876

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=97.70  E-value=0.0031  Score=46.65  Aligned_cols=42  Identities=12%  Similarity=0.208  Sum_probs=34.8

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCC
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGL  147 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l  147 (246)
                      ...++.||+.+.++.|.+. ++-+++|.+...+++......|+
T Consensus        80 ~sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~  121 (315)
T COG4030          80 LSAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGV  121 (315)
T ss_pred             hhcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCC
Confidence            4578999999999999887 77778888877888887777765

>PLN03190 aminophospholipid translocase; Provisional

Probab=97.68  E-value=9.2e-05  Score=68.58  Aligned_cols=40  Identities=20%  Similarity=0.149  Sum_probs=34.6

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCC
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGL  147 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l  147 (246)
                      ++.+|+.+.++.|++.|++++++|+.....+..+....++
T Consensus       726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~L  765 (1178)
T PLN03190        726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKL  765 (1178)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCC
Confidence            6889999999999999999999999988877776665554

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=97.67  E-value=0.00071  Score=56.24  Aligned_cols=80  Identities=13%  Similarity=0.036  Sum_probs=49.2

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHh-cCCCCcce--------EEEecCCCCCCCCChHH-HHHHHHHcCCCCCcEE
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMISK-LGLSDFFQ--------VVILGDECERAKPFPDP-YFKALEMLKVSKDHTF  185 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~~-~~l~~~f~--------~~~~~~~~~~~kp~~~~-~~~~~~~~~~~~~~~~  185 (246)
                      .++..++.| +++++|..++.+.+.+++. +|.+...-        +.+++--.  ++...+. ..++.+.++ .....+
T Consensus       101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~--G~n~~ek~~~rl~~~~g-~~~~~v  176 (498)
T PLN02499        101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIR--GTDVDQSVANRVANLFV-DERPQL  176 (498)
T ss_pred             HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEe--cCccHHHHHHHHHHHhC-ccCcee
Confidence            556667787 9999999999999999988 77654321        22222111  2222333 444555565 234578


Q ss_pred             EEecChhhhHHHHh
Q 025896          186 VFEDSVSGIKAGVA  199 (246)
Q Consensus       186 ~igD~~~Di~~a~~  199 (246)
                      -+||+..|-.-...
T Consensus       177 g~~~~~~~~~f~~~  190 (498)
T PLN02499        177 GLGRISASSSFLSL  190 (498)
T ss_pred             cccCCcccchhhhh
Confidence            88988866554444

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=97.65  E-value=0.00047  Score=50.64  Aligned_cols=92  Identities=14%  Similarity=0.112  Sum_probs=59.4

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC--cc--eEEEecCC--------CC--CCCCChHHHHH
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD--FF--QVVILGDE--------CE--RAKPFPDPYFK  172 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~--~f--~~~~~~~~--------~~--~~kp~~~~~~~  172 (246)
                      ....|++.+||+.+.+. +.|+|.|++...++..++..+++..  .+  ..+..+..        .+  .-|+    +..
T Consensus        44 ~~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~~  118 (195)
T TIGR02245        44 ELMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LGV  118 (195)
T ss_pred             EEeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEee----cHH
Confidence            45679999999999996 9999999999999999999887532  11  11111110        01  1122    222


Q ss_pred             HHHHcC--CCCCcEEEEecChhhhHHHHhcCCC
Q 025896          173 ALEMLK--VSKDHTFVFEDSVSGIKAGVAAGLP  203 (246)
Q Consensus       173 ~~~~~~--~~~~~~~~igD~~~Di~~a~~~G~~  203 (246)
                      +-.+++  .+.+++++|+|++.-..+=-..|+.
T Consensus       119 lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~  151 (195)
T TIGR02245       119 IWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLK  151 (195)
T ss_pred             hhhhcccCCCcccEEEEeCCHHHHhcCCCCccc
Confidence            333443  3778999999999655543334543

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>PLN02151 trehalose-phosphatase

Probab=97.52  E-value=0.00033  Score=56.10  Aligned_cols=71  Identities=18%  Similarity=0.117  Sum_probs=49.6

Q ss_pred             CCChHHHHHHHHHcCCCCC---cEEEEecChhhhHHHHhc-----CCCEEEEcCCCChhhhhccCCcEEecCCCChhhHH
Q 025896          164 KPFPDPYFKALEMLKVSKD---HTFVFEDSVSGIKAGVAA-----GLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWS  235 (246)
Q Consensus       164 kp~~~~~~~~~~~~~~~~~---~~~~igD~~~Di~~a~~~-----G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~  235 (246)
                      -.+..++..+++.++....   -.+||||...|-.+++.+     |+ .|.|..+.     ....|.|.+++.++  +..
T Consensus       268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~-----k~T~A~y~L~dp~e--V~~  339 (354)
T PLN02151        268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYA-----KETNASYSLQEPDE--VME  339 (354)
T ss_pred             CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCC-----CCCcceEeCCCHHH--HHH
Confidence            3567789999999876533   289999999998888764     32 34453221     23478899999999  666


Q ss_pred             HHhhhhc
Q 025896          236 ALEELDK  242 (246)
Q Consensus       236 ~l~~~~~  242 (246)
                      +|+.+..
T Consensus       340 ~L~~L~~  346 (354)
T PLN02151        340 FLERLVE  346 (354)
T ss_pred             HHHHHHH
Confidence            6666543

>PLN03017 trehalose-phosphatase

Probab=97.48  E-value=0.00036  Score=56.05  Aligned_cols=72  Identities=11%  Similarity=-0.020  Sum_probs=51.0

Q ss_pred             CCChHHHHHHHHHcCCCC---CcEEEEecChhhhHHHHhcC----CCEEEEcCCCChhhhhccCCcEEecCCCChhhHHH
Q 025896          164 KPFPDPYFKALEMLKVSK---DHTFVFEDSVSGIKAGVAAG----LPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSA  236 (246)
Q Consensus       164 kp~~~~~~~~~~~~~~~~---~~~~~igD~~~Di~~a~~~G----~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~  236 (246)
                      -.|..+++.+++.++...   .-.+||||...|-.+++.+.    .-.|.|...  .   ....|.|.+++..|  +..+
T Consensus       282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~--~---k~T~A~y~L~dp~e--V~~f  354 (366)
T PLN03017        282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKF--P---KDTDASYSLQDPSE--VMDF  354 (366)
T ss_pred             CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCC--C---CCCcceEeCCCHHH--HHHH
Confidence            356788999999988753   34899999999988888662    124555321  1   12568899999999  6777


Q ss_pred             Hhhhhc
Q 025896          237 LEELDK  242 (246)
Q Consensus       237 l~~~~~  242 (246)
                      |+.+..
T Consensus       355 L~~L~~  360 (366)
T PLN03017        355 LARLVE  360 (366)
T ss_pred             HHHHHH
Confidence            766643

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=97.47  E-value=0.00026  Score=50.59  Aligned_cols=87  Identities=23%  Similarity=0.257  Sum_probs=61.8

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCC-CCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGL-SDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l-~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      .+.+.||+.++|+++.+. +.++|.|.+...+++.+++.+.- ..+|+.++..+.....+.. .  .+-++.++.+.+++
T Consensus        34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~~-~--~KdL~~l~~~~~~v  109 (159)
T PF03031_consen   34 YVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDKGS-Y--IKDLSKLGRDLDNV  109 (159)
T ss_dssp             EEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETTE-E--E--GGGSSS-GGGE
T ss_pred             eEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhccccccccccccccccccc-c--ccchHHHhhccccE
Confidence            467899999999999777 99999999999999999999876 4678888877654322111 1  14556667788999


Q ss_pred             EEEecChhhhHH
Q 025896          185 FVFEDSVSGIKA  196 (246)
Q Consensus       185 ~~igD~~~Di~~  196 (246)
                      ++|+|+..-...
T Consensus       110 vivDD~~~~~~~  121 (159)
T PF03031_consen  110 VIVDDSPRKWAL  121 (159)
T ss_dssp             EEEES-GGGGTT
T ss_pred             EEEeCCHHHeec
Confidence            999999975433

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=97.41  E-value=0.00053  Score=56.67  Aligned_cols=90  Identities=16%  Similarity=0.178  Sum_probs=72.9

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEe
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFE  188 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ig  188 (246)
                      ..||+++-+.+||+.|++.+.+|+.++-.+..+.+..|+++|.-         ..  .|+-...+.++.+-+-.=+.|.|
T Consensus       448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiA---------ea--tPEdK~~~I~~eQ~~grlVAMtG  516 (681)
T COG2216         448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIA---------EA--TPEDKLALIRQEQAEGRLVAMTG  516 (681)
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhh---------cC--ChHHHHHHHHHHHhcCcEEEEcC
Confidence            46899999999999999999999999999999999999987543         23  34445566777666667788999


Q ss_pred             cChhhhHHHHhcCCCEEEEcCC
Q 025896          189 DSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       189 D~~~Di~~a~~~G~~~i~v~~~  210 (246)
                      |+.||..+..++.+...+ +.|
T Consensus       517 DGTNDAPALAqAdVg~AM-NsG  537 (681)
T COG2216         517 DGTNDAPALAQADVGVAM-NSG  537 (681)
T ss_pred             CCCCcchhhhhcchhhhh-ccc
Confidence            999999999999876444 344

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.41  E-value=0.0012  Score=48.53  Aligned_cols=88  Identities=11%  Similarity=0.077  Sum_probs=47.0

Q ss_pred             ccHHHHHHHHHHcCCeEEEEeCCCHH---HHHHHHHhcCCC----CcceEEEecCCCCCCCCChHHHHHHHHHcC-CCCC
Q 025896          111 SGLDKVKKWIEDRGLKRAAVTNAPRE---NAELMISKLGLS----DFFQVVILGDECERAKPFPDPYFKALEMLK-VSKD  182 (246)
Q Consensus       111 ~~~~~~l~~l~~~g~~i~i~s~~~~~---~~~~~l~~~~l~----~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~-~~~~  182 (246)
                      |-....|..+|+.  -..|.+-....   .....|...|+.    ..|-.+....   .+|  ..+...+++.+. ....
T Consensus       137 pre~aaLa~~rEy--seti~~rs~d~~~~~~~~~L~e~glt~v~garf~~v~~as---~gK--g~Aa~~ll~~y~rl~~~  209 (274)
T COG3769         137 PREQAALAMLREY--SETIIWRSSDERMAQFTARLNERGLTFVHGARFWHVLDAS---AGK--GQAANWLLETYRRLGGA  209 (274)
T ss_pred             ChHHhHHHHHHHh--hhheeecccchHHHHHHHHHHhcCceEEeccceEEEeccc---cCc--cHHHHHHHHHHHhcCce
Confidence            4455667777775  33344333222   244566666654    1222232222   222  234455555543 3334


Q ss_pred             c-EEEEecChhhhHHHHhcCCCEE
Q 025896          183 H-TFVFEDSVSGIKAGVAAGLPVV  205 (246)
Q Consensus       183 ~-~~~igD~~~Di~~a~~~G~~~i  205 (246)
                      + ++.+||++||+.+..-....++
T Consensus       210 r~t~~~GDg~nD~Pl~ev~d~Afi  233 (274)
T COG3769         210 RTTLGLGDGPNDAPLLEVMDYAFI  233 (274)
T ss_pred             eEEEecCCCCCcccHHHhhhhhee
Confidence            4 8899999999999886554433

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=97.39  E-value=0.0019  Score=50.67  Aligned_cols=88  Identities=15%  Similarity=0.158  Sum_probs=59.4

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCH---HHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPR---ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      .++||+.++|++|+++|++++++||++.   ......++++|+....+.++++.         ......+++......++
T Consensus        18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~v   88 (279)
T TIGR01452        18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSA---------LCAARLLRQPPDAPKAV   88 (279)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHH---------HHHHHHHHhhCcCCCEE
Confidence            3678899999999999999999999753   34456778888864445554332         23344555544445678


Q ss_pred             EEEecChhhhHHHHhcCCCEE
Q 025896          185 FVFEDSVSGIKAGVAAGLPVV  205 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~~i  205 (246)
                      +++|+. .....++..|+..+
T Consensus        89 ~~iG~~-~~~~~l~~~g~~~~  108 (279)
T TIGR01452        89 YVIGEE-GLRAELDAAGIRLA  108 (279)
T ss_pred             EEEcCH-HHHHHHHHCCCEEe
Confidence            889975 33455667787643

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.35  E-value=0.0035  Score=43.31  Aligned_cols=96  Identities=16%  Similarity=0.109  Sum_probs=61.8

Q ss_pred             cCCCcccHHHHHHHHHHc-C-CeEEEEeCCC--------HHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHH
Q 025896          106 QLKPISGLDKVKKWIEDR-G-LKRAAVTNAP--------RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALE  175 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~-g-~~i~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~  175 (246)
                      ...+.|...+-+++|+.. | ..+.++||.-        ...+...-++.|+.=      .    ..++-+|..-....+
T Consensus        59 ~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpV------l----RHs~kKP~ct~E~~~  128 (190)
T KOG2961|consen   59 SLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPV------L----RHSVKKPACTAEEVE  128 (190)
T ss_pred             ccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCce------E----eecccCCCccHHHHH
Confidence            456667777888888774 3 6788888762        122333334445541      1    112223323333333


Q ss_pred             H-cC----CCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCC
Q 025896          176 M-LK----VSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       176 ~-~~----~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~  211 (246)
                      . ++    .++.+++||||.+ .||.+|...|.-.+|..+|-
T Consensus       129 y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv  170 (190)
T KOG2961|consen  129 YHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGV  170 (190)
T ss_pred             HHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccc
Confidence            3 23    5789999999999 99999999999999998873

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=97.34  E-value=0.0005  Score=53.91  Aligned_cols=100  Identities=21%  Similarity=0.250  Sum_probs=71.5

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc---CCCCcceEEEecCCC-----CCCCCC--------------
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL---GLSDFFQVVILGDEC-----ERAKPF--------------  166 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~-----~~~kp~--------------  166 (246)
                      -.|...++|+.|+++|.++.++||++......-...+   .+.++||.++.....     ...+|-              
T Consensus       241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdk  320 (510)
T KOG2470|consen  241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDK  320 (510)
T ss_pred             ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhh
Confidence            3467889999999999999999999988776655544   455788887754221     011110              


Q ss_pred             -----------hHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHH-hcCCCEEEEc
Q 025896          167 -----------PDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGV-AAGLPVVGLT  208 (246)
Q Consensus       167 -----------~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~-~~G~~~i~v~  208 (246)
                                 ...+...++--|....+++++||.+ +|+.... ++|+.+-.+-
T Consensus       321 v~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII  375 (510)
T KOG2470|consen  321 VDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII  375 (510)
T ss_pred             hhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence                       0114456666677888999999999 9998877 8899877663

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=97.25  E-value=0.0022  Score=56.18  Aligned_cols=113  Identities=13%  Similarity=0.110  Sum_probs=73.8

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcce--EEEecCCC------------------CCCCCCh
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQ--VVILGDEC------------------ERAKPFP  167 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~------------------~~~kp~~  167 (246)
                      +.+||+.+.++.|+..|+.+-.+|+.+-..++.+...+|+..-=+  ..+.+.+.                  ..+.|.-
T Consensus       647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~D  726 (1034)
T KOG0204|consen  647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPND  726 (1034)
T ss_pred             CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCch
Confidence            568999999999999999999999999999999999999863222  11111110                  1112211


Q ss_pred             HHHHHHHHHcCCCCCcEEEE-ecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEec
Q 025896          168 DPYFKALEMLKVSKDHTFVF-EDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIK  226 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~i-gD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~  226 (246)
                        .+-+.+-+. ...++++| ||+.||-++.++|.+...+--.|.   +-.++..|+++-
T Consensus       727 --K~lLVk~L~-~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGT---eVAKEaSDIIi~  780 (1034)
T KOG0204|consen  727 --KHLLVKGLI-KQGEVVAVTGDGTNDAPALKEADVGLAMGIAGT---EVAKEASDIIIL  780 (1034)
T ss_pred             --HHHHHHHHH-hcCcEEEEecCCCCCchhhhhcccchhccccch---hhhhhhCCeEEE
Confidence              111112111 23455555 999999999999997755544443   334456777664

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=97.21  E-value=0.0031  Score=47.25  Aligned_cols=80  Identities=15%  Similarity=0.012  Sum_probs=59.9

Q ss_pred             EEEeCCCHHHHHHHHHhcCCCCcc--eEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEE
Q 025896          128 AAVTNAPRENAELMISKLGLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVV  205 (246)
Q Consensus       128 ~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i  205 (246)
                      ++||++...-.-.++--.++.++|  +.|+++..+    .+...|+++.+++|-+.-..++|||+...-.+|+..+++++
T Consensus       179 vLVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kv----GK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw  254 (274)
T TIGR01658       179 VLVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKV----GKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFV  254 (274)
T ss_pred             EEEEcCccHHHHHHHHHhccCCccccccccchhhc----chHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeE
Confidence            556666544333334444777766  556655443    26689999999999988889999999999999999999999


Q ss_pred             EEcCCC
Q 025896          206 GLTTRN  211 (246)
Q Consensus       206 ~v~~~~  211 (246)
                      -++...
T Consensus       255 ~I~~h~  260 (274)
T TIGR01658       255 KIDLHP  260 (274)
T ss_pred             EeecCC
Confidence            996654

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=96.84  E-value=0.003  Score=54.22  Aligned_cols=48  Identities=13%  Similarity=0.190  Sum_probs=33.9

Q ss_pred             CcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChh
Q 025896          182 DHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPK  232 (246)
Q Consensus       182 ~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~  232 (246)
                      .++..|||+-||+.|.+.|.++ |++....+  .+....||+-|..+.-+.
T Consensus       782 krvc~IGDGGNDVsMIq~A~~G-iGI~gkEG--kQASLAADfSItqF~Hv~  829 (1051)
T KOG0210|consen  782 KRVCAIGDGGNDVSMIQAADVG-IGIVGKEG--KQASLAADFSITQFSHVS  829 (1051)
T ss_pred             ceEEEEcCCCccchheeecccc-eeeecccc--cccchhccccHHHHHHHH
Confidence            6789999999999999998765 34433222  223357888888777644

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=96.79  E-value=0.026  Score=45.61  Aligned_cols=101  Identities=12%  Similarity=0.091  Sum_probs=72.4

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc---CCCCcceEEEecCC---------------CC----------
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL---GLSDFFQVVILGDE---------------CE----------  161 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~---------------~~----------  161 (246)
                      .+....+|..+++.|..+.++||.+..+.......+   +...+||.++....               ..          
T Consensus       200 d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~  279 (424)
T KOG2469|consen  200 DGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNT  279 (424)
T ss_pred             cCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccC
Confidence            344566999999999999999999887776666543   56688888876531               01          


Q ss_pred             -----CCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhH-HHHhcCCCEEEEcCC
Q 025896          162 -----RAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIK-AGVAAGLPVVGLTTR  210 (246)
Q Consensus       162 -----~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~-~a~~~G~~~i~v~~~  210 (246)
                           .+.+.+.....++..++....+++++||+- -|+. .-+.-|+.++.+...
T Consensus       280 ~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe  335 (424)
T KOG2469|consen  280 GPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE  335 (424)
T ss_pred             CcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehh
Confidence                 122233456777888888889999999999 5764 445568888888544

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=96.52  E-value=0.016  Score=46.40  Aligned_cols=95  Identities=16%  Similarity=0.163  Sum_probs=60.8

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCH------------HHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHH
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPR------------ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALE  175 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~------------~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~  175 (246)
                      .+++.+..-|+.|.+.|+.++|.||...            ..+..+...+++.  |...........+||...++....+
T Consensus       104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vP--i~~~~A~~~~~yRKP~tGMwe~~~~  181 (422)
T KOG2134|consen  104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVP--IQLLAAIIKGKYRKPSTGMWEFLKR  181 (422)
T ss_pred             eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCc--eEEeeeccCCcccCcchhHHHHHHH
Confidence            3456666778889999999999987632            2244455555554  3332222333678998888887776


Q ss_pred             HcC----CCCCcEEEEecC---------------hhhhHHHHhcCCCE
Q 025896          176 MLK----VSKDHTFVFEDS---------------VSGIKAGVAAGLPV  204 (246)
Q Consensus       176 ~~~----~~~~~~~~igD~---------------~~Di~~a~~~G~~~  204 (246)
                      .++    ++...+.|+||-               ..|+.-|.++|+.+
T Consensus       182 ~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF  229 (422)
T KOG2134|consen  182 LENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKF  229 (422)
T ss_pred             HhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCcc
Confidence            543    344556677763               35777888888754

>PRK10444 UMP phosphatase; Provisional

Probab=96.34  E-value=0.05  Score=41.94  Aligned_cols=50  Identities=20%  Similarity=0.209  Sum_probs=38.2

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHH---HHHHHHhcCCCCcceEEEec
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPREN---AELMISKLGLSDFFQVVILG  157 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~---~~~~l~~~~l~~~f~~~~~~  157 (246)
                      .+.|++.+++++|++.|.+++++||+....   ....|+.+|+.---+.++++
T Consensus        17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts   69 (248)
T PRK10444         17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS   69 (248)
T ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence            468999999999999999999999997643   45556667875334555554

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=96.25  E-value=0.017  Score=43.85  Aligned_cols=131  Identities=13%  Similarity=0.151  Sum_probs=66.3

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEe----cCCC----CCCCCChHHHH---HH
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVIL----GDEC----ERAKPFPDPYF---KA  173 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~----~~~~----~~~kp~~~~~~---~~  173 (246)
                      ..+.+++|+.++++.|+++++|+.|.|++--..+...+++.+...---.+++    .++.    +..-|--..|.   .+
T Consensus        87 s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~  166 (246)
T PF05822_consen   87 SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESA  166 (246)
T ss_dssp             S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHH
T ss_pred             cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccc
Confidence            3578999999999999999999999999999999999998865421111111    1111    11222111111   11


Q ss_pred             HH---Hc-CC-CCCcEEEEecChhhhHHHHhc-CCC---EEEEcCCCChhhhh--ccCCcEEecCCCChhhHH
Q 025896          174 LE---ML-KV-SKDHTFVFEDSVSGIKAGVAA-GLP---VVGLTTRNPEHVLL--EANPTFLIKDYDDPKLWS  235 (246)
Q Consensus       174 ~~---~~-~~-~~~~~~~igD~~~Di~~a~~~-G~~---~i~v~~~~~~~~~~--~~~~~~~i~~~~el~~~~  235 (246)
                      ++   .+ .+ ...+++..||+.-|+.|+..+ ...   .|++........+.  ...=|.|+-+-..+.++.
T Consensus       167 l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~v~~  239 (246)
T PF05822_consen  167 LEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMDVPN  239 (246)
T ss_dssp             HTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-HHHH
T ss_pred             ccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCchHHH
Confidence            21   11 23 347799999999999998776 333   44444443222121  224456665555544443

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>KOG0206 consensus P-type ATPase [General function prediction only]

Probab=96.19  E-value=0.012  Score=54.10  Aligned_cols=41  Identities=20%  Similarity=0.100  Sum_probs=33.6

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGL  147 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l  147 (246)
                      .++.+|+.+.++.|++.|++++++|+...+.+-.+.-.+++
T Consensus       650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~L  690 (1151)
T KOG0206|consen  650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRL  690 (1151)
T ss_pred             chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcC
Confidence            47889999999999999999999999877766655555443

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=95.96  E-value=0.021  Score=44.04  Aligned_cols=49  Identities=16%  Similarity=0.237  Sum_probs=40.5

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCC---CHHHHHHHHHhcCCCCcceEEEec
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNA---PRENAELMISKLGLSDFFQVVILG  157 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~  157 (246)
                      +.|++.++|++|+++|++++++||+   +...+...++.+|+....+.++++
T Consensus        18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~   69 (249)
T TIGR01457        18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTA   69 (249)
T ss_pred             eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeH
Confidence            4568999999999999999999984   466778888889987666777765

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>KOG3128 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.76  E-value=0.041  Score=41.59  Aligned_cols=95  Identities=8%  Similarity=0.057  Sum_probs=61.6

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEec----CCC----CCCCC-------ChHHH
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILG----DEC----ERAKP-------FPDPY  170 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~----~~~----~~~kp-------~~~~~  170 (246)
                      .+.+.+|+.++...|+.+++++.|.|.+--..++.++.+......+-.+++.    +..    +...|       +...+
T Consensus       136 ~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~  215 (298)
T KOG3128|consen  136 NIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVL  215 (298)
T ss_pred             hHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHH
Confidence            4567788999999999999999999999888888777654332212111111    111    11222       12233


Q ss_pred             HHHHHHcCC--CCCcEEEEecChhhhHHHHhc
Q 025896          171 FKALEMLKV--SKDHTFVFEDSVSGIKAGVAA  200 (246)
Q Consensus       171 ~~~~~~~~~--~~~~~~~igD~~~Di~~a~~~  200 (246)
                      +...+.+..  ...++++.||+.-|+.|+..+
T Consensus       216 ~~~s~yf~~~~~~~nVillGdsigdl~ma~gv  247 (298)
T KOG3128|consen  216 QNESEYFHQLAGRVNVILLGDSIGDLHMADGV  247 (298)
T ss_pred             HhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence            344444443  446799999999999999875

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=95.71  E-value=0.017  Score=44.85  Aligned_cols=50  Identities=20%  Similarity=0.209  Sum_probs=39.3

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHH---HHHHHHHhcCCCCcceEEEec
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRE---NAELMISKLGLSDFFQVVILG  157 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~---~~~~~l~~~~l~~~f~~~~~~  157 (246)
                      .+.|++.+++++|+++|++++++||++..   .....++.+|+.--.+.++++
T Consensus        21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts   73 (257)
T TIGR01458        21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP   73 (257)
T ss_pred             CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence            36889999999999999999999997654   466777888876334556654

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=95.66  E-value=0.12  Score=39.58  Aligned_cols=72  Identities=17%  Similarity=0.208  Sum_probs=48.7

Q ss_pred             CCeEEEEeCCCHHHHHHHHHhc---CCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc
Q 025896          124 GLKRAAVTNAPRENAELMISKL---GLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAA  200 (246)
Q Consensus       124 g~~i~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~  200 (246)
                      -+++++||..+.....+.++.+   |+.  +|..+.-.    +.++    ..+++.++-    -+|++|....++.|. .
T Consensus       186 piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLg----G~~K----~~vL~~~~p----hIFFDDQ~~H~~~a~-~  250 (264)
T PF06189_consen  186 PIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLG----GLPK----GPVLKAFRP----HIFFDDQDGHLESAS-K  250 (264)
T ss_pred             ceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhC----CCch----hHHHHhhCC----CEeecCchhhhhHhh-c
Confidence            4889999998876666655544   554  33322111    2233    245665443    489999999999998 8


Q ss_pred             CCCEEEEcCC
Q 025896          201 GLPVVGLTTR  210 (246)
Q Consensus       201 G~~~i~v~~~  210 (246)
                      ++++..|..|
T Consensus       251 ~vps~hVP~g  260 (264)
T PF06189_consen  251 VVPSGHVPYG  260 (264)
T ss_pred             CCCEEeccCC
Confidence            8999999776

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=95.66  E-value=0.059  Score=36.86  Aligned_cols=99  Identities=14%  Similarity=0.158  Sum_probs=60.1

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCC--CHHHHH----HHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNA--PRENAE----LMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~--~~~~~~----~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      .+...|++.+.+++|-+. +.++|+|..  .+....    ...+.+..-++-..++++. .+.-                
T Consensus        66 nL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn-Kniv----------------  127 (180)
T COG4502          66 NLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN-KNIV----------------  127 (180)
T ss_pred             hcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC-CCeE----------------
Confidence            467789999999999998 999999987  333333    3334444444334444332 1111                


Q ss_pred             CCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       180 ~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                        .--++|+|++..++..+  |.+ |++...++..+    .-...+.++.|.
T Consensus       128 --kaDilIDDnp~nLE~F~--G~k-IlFdA~HN~ne----nRF~Rv~~W~e~  170 (180)
T COG4502         128 --KADILIDDNPLNLENFK--GNK-ILFDAHHNKNE----NRFVRVRDWYEA  170 (180)
T ss_pred             --EeeEEecCCchhhhhcc--Cce-EEEecccccCc----cceeeeccHHHH
Confidence              11368999999888765  443 56655544433    234567777773

>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=94.85  E-value=0.076  Score=47.03  Aligned_cols=41  Identities=12%  Similarity=0.076  Sum_probs=34.5

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGL  147 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l  147 (246)
                      .++.+++++.+++|++.+.+++.+|+.++-.+-.+.+.+|+
T Consensus       674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~i  714 (1160)
T KOG0209|consen  674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGI  714 (1160)
T ss_pred             CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeee
Confidence            35779999999999999999999999988777766666654

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=94.74  E-value=0.47  Score=36.29  Aligned_cols=86  Identities=17%  Similarity=0.156  Sum_probs=53.1

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHh-cCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAP---RENAELMISK-LGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKD  182 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~---~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~  182 (246)
                      ..++|++.+.|+.++++|+++.++||+.   .......+.. +|+.--.+.++++..         .....+++.. +..
T Consensus        13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~---------~~~~~l~~~~-~~~   82 (236)
T TIGR01460        13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGS---------VTKDLLRQRF-EGE   82 (236)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHH---------HHHHHHHHhC-CCC
Confidence            3457899999999999999999999775   3444455655 677544566654432         1222333222 224


Q ss_pred             cEEEEecChhhhHHHHhcCCC
Q 025896          183 HTFVFEDSVSGIKAGVAAGLP  203 (246)
Q Consensus       183 ~~~~igD~~~Di~~a~~~G~~  203 (246)
                      .++++|.. ...+.++..|+.
T Consensus        83 ~v~v~G~~-~~~~~l~~~g~~  102 (236)
T TIGR01460        83 KVYVIGVG-ELRESLEGLGFR  102 (236)
T ss_pred             EEEEECCH-HHHHHHHHcCCc
Confidence            57777753 445555666653

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=94.70  E-value=0.11  Score=40.21  Aligned_cols=37  Identities=11%  Similarity=0.009  Sum_probs=25.7

Q ss_pred             CCCcccHHHHHHHHHHcC-CeEEEEeCCCHHHHHHHHH
Q 025896          107 LKPISGLDKVKKWIEDRG-LKRAAVTNAPRENAELMIS  143 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g-~~i~i~s~~~~~~~~~~l~  143 (246)
                      ..+.+++..+|..|..+. ..++|+|+.+.......+.
T Consensus        39 a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~   76 (266)
T COG1877          39 AVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG   76 (266)
T ss_pred             cCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence            456667778888887762 2378888887777776665

>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]

Probab=94.63  E-value=0.15  Score=40.89  Aligned_cols=79  Identities=16%  Similarity=0.115  Sum_probs=54.2

Q ss_pred             EEEEeCCCHHHHHHHHHhcCCCCcc--eEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCE
Q 025896          127 RAAVTNAPRENAELMISKLGLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPV  204 (246)
Q Consensus       127 i~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~  204 (246)
                      -+++|+....-.-.++--.||...|  +.|++....+    +...|+++.+++|- .-..++|||+...-.+|++..|++
T Consensus       373 nVlvTttqLipalaKvLL~gLg~~fpiENIYSa~kiG----KescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~Pf  447 (468)
T KOG3107|consen  373 NVLVTTTQLIPALAKVLLYGLGSSFPIENIYSATKIG----KESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPF  447 (468)
T ss_pred             EEEEeccchhHHHHHHHHHhcCCcccchhhhhhhhcc----HHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCce
Confidence            4556666443332333333555444  5666554433    56789999999998 456788999999999999999998


Q ss_pred             EEEcCC
Q 025896          205 VGLTTR  210 (246)
Q Consensus       205 i~v~~~  210 (246)
                      .-++..
T Consensus       448 wrI~~h  453 (468)
T KOG3107|consen  448 WRISSH  453 (468)
T ss_pred             EeeccC
Confidence            888543

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=94.58  E-value=0.097  Score=40.99  Aligned_cols=42  Identities=21%  Similarity=0.344  Sum_probs=36.9

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF  151 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f  151 (246)
                      .+.+.++|++|++.|++++++|+.+...+...++.+++..++
T Consensus        23 ~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~   64 (273)
T PRK00192         23 YEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF   64 (273)
T ss_pred             cHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence            355788999999999999999999999999999999987544

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=94.37  E-value=0.33  Score=35.81  Aligned_cols=40  Identities=28%  Similarity=0.413  Sum_probs=33.1

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHH---HHHHHHHhcCCC
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRE---NAELMISKLGLS  148 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~---~~~~~l~~~~l~  148 (246)
                      ..||+.+.|++|++++..+-.+||....   .....|.++|+.
T Consensus        24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~   66 (262)
T KOG3040|consen   24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD   66 (262)
T ss_pred             cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence            6799999999999998999999998654   466677777765

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=94.10  E-value=0.16  Score=38.50  Aligned_cols=40  Identities=18%  Similarity=0.218  Sum_probs=35.6

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      .+.+.++|++|+++|++++++|+.+...+...++.+|+..
T Consensus        17 ~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~   56 (225)
T TIGR02461        17 PGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP   56 (225)
T ss_pred             chHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence            3468899999999999999999999999999999999754

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=93.81  E-value=0.16  Score=38.19  Aligned_cols=41  Identities=17%  Similarity=0.102  Sum_probs=35.9

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      +.+...+.|++|++.|++++++|+++...++..++.+++..
T Consensus        19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~   59 (215)
T TIGR01487        19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG   59 (215)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence            44567899999999999999999999999999888888763

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=93.52  E-value=0.29  Score=38.12  Aligned_cols=41  Identities=10%  Similarity=0.161  Sum_probs=35.4

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      +.+...+.|++++++|++++++|+++...+...++.+++..
T Consensus        21 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   61 (270)
T PRK10513         21 ISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ   61 (270)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence            34556789999999999999999999999999999988753

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=93.38  E-value=0.23  Score=37.39  Aligned_cols=36  Identities=17%  Similarity=0.251  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC
Q 025896          113 LDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS  148 (246)
Q Consensus       113 ~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~  148 (246)
                      ..+.|++|++.|++++++|+++...+...++.+++.
T Consensus        21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~   56 (221)
T TIGR02463        21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT   56 (221)
T ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            678999999999999999999999999999999876

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=93.34  E-value=0.23  Score=38.85  Aligned_cols=42  Identities=10%  Similarity=0.067  Sum_probs=36.7

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCc
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF  150 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~  150 (246)
                      +.+...+.|++|+++|++++++|+++...+...++.+++..+
T Consensus        20 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~   61 (272)
T PRK15126         20 LGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAY   61 (272)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence            455577999999999999999999999999999999988643

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=93.30  E-value=0.23  Score=37.64  Aligned_cols=42  Identities=14%  Similarity=-0.075  Sum_probs=35.9

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCc
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF  150 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~  150 (246)
                      +.+...+.|++|++.|++++++|+++...+...+..+++..+
T Consensus        21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~   62 (230)
T PRK01158         21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGP   62 (230)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCc
Confidence            445677899999999999999999999988888888887643

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=93.20  E-value=0.27  Score=38.04  Aligned_cols=41  Identities=17%  Similarity=0.321  Sum_probs=35.8

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      +.+...+.|++|+++|++++++|+++...+...++.+++..
T Consensus        17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~   57 (256)
T TIGR00099        17 ISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT   57 (256)
T ss_pred             cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence            44567899999999999999999999999999999988763

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=93.17  E-value=0.38  Score=41.89  Aligned_cols=84  Identities=14%  Similarity=0.109  Sum_probs=59.6

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC-Ccc-eEEEecCCCCCCCCChHHHHHHHHHcCCCC--
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS-DFF-QVVILGDECERAKPFPDPYFKALEMLKVSK--  181 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~-~~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~--  181 (246)
                      .+++.|++.+||+++.+. +.+.|+|.+.+.++..+++-+.-. .+| |.|++.++.+..|        .+.-....|  
T Consensus       199 ~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde~~~~k--------t~dL~~~~p~g  269 (635)
T KOG0323|consen  199 LVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDESPFFK--------TLDLVLLFPCG  269 (635)
T ss_pred             EEEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCccccceEEEecCCCccc--------ccccccCCCCC
Confidence            468899999999999988 999999999999999999887544 456 7777777633222        222222333  


Q ss_pred             -CcEEEEecChhhhHHHH
Q 025896          182 -DHTFVFEDSVSGIKAGV  198 (246)
Q Consensus       182 -~~~~~igD~~~Di~~a~  198 (246)
                       ..++.|+|+.+=.....
T Consensus       270 ~smvvIIDDr~dVW~~~~  287 (635)
T KOG0323|consen  270 DSMVVIIDDRSDVWPDHK  287 (635)
T ss_pred             CccEEEEeCccccccCCC
Confidence             33788888775444444

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=93.10  E-value=0.3  Score=38.39  Aligned_cols=43  Identities=14%  Similarity=0.119  Sum_probs=37.3

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCc
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF  150 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~  150 (246)
                      ..++.+.+.|++|+++|++++++|+.....+....+.+++...
T Consensus        18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p   60 (302)
T PRK12702         18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP   60 (302)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence            3455578999999999999999999999999999999998753

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=92.91  E-value=0.54  Score=37.83  Aligned_cols=85  Identities=16%  Similarity=0.166  Sum_probs=56.2

Q ss_pred             CcccHHHHHHHHHHc----CCeEEEEeCCC---HHHHHH-HHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCC
Q 025896          109 PISGLDKVKKWIEDR----GLKRAAVTNAP---RENAEL-MISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS  180 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~----g~~i~i~s~~~---~~~~~~-~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  180 (246)
                      +.|++.++++.|+..    |+++.++||+.   ...... ..+++|+.--.+.++++.         .....++++++  
T Consensus        17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~---------~~~~~ll~~~~--   85 (321)
T TIGR01456        17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH---------SPYKSLVNKYE--   85 (321)
T ss_pred             ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh---------HHHHHHHHHcC--
Confidence            478899999999998    99999999986   344333 347788753233333321         13345555542  


Q ss_pred             CCcEEEEecChhhhHHHHhcCCCEEE
Q 025896          181 KDHTFVFEDSVSGIKAGVAAGLPVVG  206 (246)
Q Consensus       181 ~~~~~~igD~~~Di~~a~~~G~~~i~  206 (246)
                       ..+++||.+- -.+.++..|+..+.
T Consensus        86 -~~v~viG~~~-~~~~l~~~G~~~vv  109 (321)
T TIGR01456        86 -KRILAVGTGS-VRGVAEGYGFQNVV  109 (321)
T ss_pred             -CceEEEeChH-HHHHHHHcCCcccc
Confidence             2678888764 56777788987553

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PRK10976 putative hydrolase; Provisional

Probab=92.76  E-value=0.29  Score=38.05  Aligned_cols=42  Identities=12%  Similarity=0.144  Sum_probs=36.1

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCc
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF  150 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~  150 (246)
                      +.+...+.|++++++|++++++|+++...+...++.+++..+
T Consensus        20 is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~   61 (266)
T PRK10976         20 LSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSY   61 (266)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCe
Confidence            445577999999999999999999999999989999887643

>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]

Probab=92.48  E-value=0.068  Score=47.36  Aligned_cols=101  Identities=18%  Similarity=0.077  Sum_probs=62.1

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC----c-----------ceEEEecC-----CCCCCCC-
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD----F-----------FQVVILGD-----ECERAKP-  165 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~----~-----------f~~~~~~~-----~~~~~kp-  165 (246)
                      .+|...+.+....|+..|++++.+|+..+..+.......|+-.    .           .+.+...+     ..+..+| 
T Consensus       589 dPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~  668 (1019)
T KOG0203|consen  589 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPD  668 (1019)
T ss_pred             CCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccc
Confidence            3567778899999999999999999987777666666555311    0           11111000     0011222 


Q ss_pred             -ChHHHHHHHHHcC------CCC-------------Cc-EEEEecChhhhHHHHhcCCCEEEE
Q 025896          166 -FPDPYFKALEMLK------VSK-------------DH-TFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       166 -~~~~~~~~~~~~~------~~~-------------~~-~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                       .++-+..+++...      -+|             .. +.+.||+.||-.+.++|.+.+++-
T Consensus       669 ~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMG  731 (1019)
T KOG0203|consen  669 MSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG  731 (1019)
T ss_pred             cCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeec
Confidence             2334455555432      122             22 446699999999999999876663

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=92.48  E-value=0.19  Score=45.93  Aligned_cols=40  Identities=8%  Similarity=0.054  Sum_probs=33.2

Q ss_pred             CCCcccHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcC
Q 025896          107 LKPISGLDKVKKWIEDR-GLKRAAVTNAPRENAELMISKLG  146 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~-g~~i~i~s~~~~~~~~~~l~~~~  146 (246)
                      ..+.|++.++|+.|.+. +..++|+|+.+...++..+...+
T Consensus       621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~  661 (934)
T PLN03064        621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD  661 (934)
T ss_pred             cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence            45678889999999775 57899999999999998887654

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=92.45  E-value=0.36  Score=37.60  Aligned_cols=41  Identities=15%  Similarity=0.074  Sum_probs=35.7

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      +.|...+.|++++++|+.++++|+++...+...++.+++..
T Consensus        21 i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   61 (272)
T PRK10530         21 ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT   61 (272)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence            44557799999999999999999999999999999988764

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=92.44  E-value=0.35  Score=36.49  Aligned_cols=41  Identities=17%  Similarity=0.110  Sum_probs=34.8

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      +.+...+.|+++++.|++++++|+++...+...++.+++..
T Consensus        16 i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~   56 (225)
T TIGR01482        16 INESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD   56 (225)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence            34556788999999999999999999999998888888543

catalyze the same reaction as SPP.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=92.36  E-value=0.34  Score=37.66  Aligned_cols=43  Identities=16%  Similarity=0.260  Sum_probs=39.0

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      ..+.+.+.+.|++++++|++++++|+++...+...++.+++..
T Consensus        19 ~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~   61 (264)
T COG0561          19 KTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG   61 (264)
T ss_pred             CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence            3467778999999999999999999999999999999999885

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=92.26  E-value=0.42  Score=36.99  Aligned_cols=38  Identities=21%  Similarity=0.347  Sum_probs=34.1

Q ss_pred             cHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          112 GLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       112 ~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      ...+.+++|+++|++++++|+++...+...++.+++..
T Consensus        20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~   57 (256)
T TIGR01486        20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLED   57 (256)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence            36789999999999999999999999999999998753

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]

Probab=92.00  E-value=1.4  Score=29.76  Aligned_cols=84  Identities=10%  Similarity=0.101  Sum_probs=58.8

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHhcCCCCc---------ceEEEecCCCCCCCCChHHHHHHHH
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPR-ENAELMISKLGLSDF---------FQVVILGDECERAKPFPDPYFKALE  175 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~-~~~~~~l~~~~l~~~---------f~~~~~~~~~~~~kp~~~~~~~~~~  175 (246)
                      ....|+++...|..|++.|+.++++|++.. ..+...|+.+.+..-         |+.+..++     -.+...|..+-+
T Consensus        42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~-----gsklghfke~~n  116 (144)
T KOG4549|consen   42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGD-----GSKLGHFKEFTN  116 (144)
T ss_pred             eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecC-----cccchhHHHHhh
Confidence            467899999999999999999999998754 567778887765422         22222222     123345677777


Q ss_pred             HcCCCCCcEEEEecChhhh
Q 025896          176 MLKVSKDHTFVFEDSVSGI  194 (246)
Q Consensus       176 ~~~~~~~~~~~igD~~~Di  194 (246)
                      ..++...+..++.|-..+-
T Consensus       117 ~s~~~~k~~~~fdDesrnk  135 (144)
T KOG4549|consen  117 NSNSIEKNKQVFDDESRNK  135 (144)
T ss_pred             ccCcchhceeeecccccCC
Confidence            7788778888888876443

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=91.89  E-value=0.08  Score=37.70  Aligned_cols=16  Identities=38%  Similarity=0.733  Sum_probs=13.0

Q ss_pred             ceEEEeCCCccccChh
Q 025896           23 EAVLFDVDGTLCDSDP   38 (246)
Q Consensus        23 k~iifD~DGTL~~~~~   38 (246)
                      |+++||+||||+.+..
T Consensus         1 k~LVlDLD~TLv~~~~   16 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSS   16 (159)
T ss_dssp             EEEEEE-CTTTEEEES
T ss_pred             CEEEEeCCCcEEEEee
Confidence            6899999999998664

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=91.70  E-value=0.43  Score=36.34  Aligned_cols=42  Identities=17%  Similarity=0.222  Sum_probs=37.8

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS  148 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~  148 (246)
                      ..+.+...+.|++|+++|+.++++|+++...+...+..+++.
T Consensus        14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~   55 (254)
T PF08282_consen   14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID   55 (254)
T ss_dssp             SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred             CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence            346678899999999999999999999999999999988876

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=91.49  E-value=0.58  Score=42.54  Aligned_cols=39  Identities=8%  Similarity=0.025  Sum_probs=30.2

Q ss_pred             CCCcccHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhc
Q 025896          107 LKPISGLDKVKKWIEDR-GLKRAAVTNAPRENAELMISKL  145 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~-g~~i~i~s~~~~~~~~~~l~~~  145 (246)
                      ..+.|++.++|+.|.+. +..++|+|+.+...++..+...
T Consensus       531 a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~  570 (797)
T PLN03063        531 LGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY  570 (797)
T ss_pred             CCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC
Confidence            44567788888888765 5679999999888888888653

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=90.90  E-value=0.58  Score=36.59  Aligned_cols=38  Identities=8%  Similarity=0.041  Sum_probs=34.3

Q ss_pred             ccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC
Q 025896          111 SGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS  148 (246)
Q Consensus       111 ~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~  148 (246)
                      +...+.|++|+++|++++++|+++...+...++.+++.
T Consensus        27 ~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~   64 (271)
T PRK03669         27 QPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ   64 (271)
T ss_pred             HHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence            44678899999999999999999999999999999875

>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=90.34  E-value=0.9  Score=41.41  Aligned_cols=45  Identities=11%  Similarity=0.016  Sum_probs=35.7

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF  151 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f  151 (246)
                      -++.+.....+++|.+..++.+.+|+.+.-..--+.++.|+-+-.
T Consensus       704 NkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~  748 (1140)
T KOG0208|consen  704 NKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQ  748 (1140)
T ss_pred             cccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCC
Confidence            356788899999999999999999999877666666666654433

>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D

Probab=89.94  E-value=4.9  Score=27.82  Aligned_cols=99  Identities=14%  Similarity=0.161  Sum_probs=51.0

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHh----cCCCCcce-EEEecCCC-----CCCCCChHHHHHHHHHcC
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRE-NAELMISK----LGLSDFFQ-VVILGDEC-----ERAKPFPDPYFKALEMLK  178 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~-~~~~~l~~----~~l~~~f~-~~~~~~~~-----~~~kp~~~~~~~~~~~~~  178 (246)
                      ...+.+++.+..++|-++.++-++... .......+    .++..... .+......     ...-..+...+.++..++
T Consensus        21 i~~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (138)
T PF13580_consen   21 IEKAADLIAEALRNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIALNDDALTAISNDLEYDEGFARQLLALYD  100 (138)
T ss_dssp             HHHHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEETTSTHHHHHHHHTTGGGTHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCcccccccccccchHhhhhcccchhhHHHHHHHHHcC
Confidence            344667777777777788888777543 23333332    23333332 33322211     011112345567788888


Q ss_pred             CCCCcEEEE----ecChhhh---HHHHhcCCCEEEEc
Q 025896          179 VSKDHTFVF----EDSVSGI---KAGVAAGLPVVGLT  208 (246)
Q Consensus       179 ~~~~~~~~i----gD~~~Di---~~a~~~G~~~i~v~  208 (246)
                      +.|.+++++    |.+++=+   ..|++.|+.+|.+.
T Consensus       101 ~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT  137 (138)
T PF13580_consen  101 IRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT  137 (138)
T ss_dssp             --TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence            999998876    6666655   45566799988873

...

>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences

Probab=89.29  E-value=8  Score=29.41  Aligned_cols=97  Identities=11%  Similarity=0.053  Sum_probs=59.8

Q ss_pred             CCCcccHHHHH---HHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCC-CCCCCCChHHHHHHHHHcCCCCC
Q 025896          107 LKPISGLDKVK---KWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDE-CERAKPFPDPYFKALEMLKVSKD  182 (246)
Q Consensus       107 ~~~~~~~~~~l---~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~-~~~~kp~~~~~~~~~~~~~~~~~  182 (246)
                      ..++|+..+++   +.|-+.|+.+.-+++.+....++ |...|-.....  ..+.. .+.+.-++..++.++++.+++  
T Consensus       103 ~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akr-L~d~GcaavMP--lgsPIGSg~Gi~n~~~l~~i~~~~~vP--  177 (247)
T PF05690_consen  103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKR-LEDAGCAAVMP--LGSPIGSGRGIQNPYNLRIIIERADVP--  177 (247)
T ss_dssp             TT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHH-HHHTT-SEBEE--BSSSTTT---SSTHHHHHHHHHHGSSS--
T ss_pred             CCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHH-HHHCCCCEEEe--cccccccCcCCCCHHHHHHHHHhcCCc--
Confidence            45678777776   46778899999999998666555 55556443222  22222 245667889999999999774  


Q ss_pred             cEEEEecC---hhhhHHHHhcCCCEEEEcCC
Q 025896          183 HTFVFEDS---VSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       183 ~~~~igD~---~~Di~~a~~~G~~~i~v~~~  210 (246)
                        +.|+-+   ++|...|.+.|+..+++++.
T Consensus       178 --vIvDAGiG~pSdaa~AMElG~daVLvNTA  206 (247)
T PF05690_consen  178 --VIVDAGIGTPSDAAQAMELGADAVLVNTA  206 (247)
T ss_dssp             --BEEES---SHHHHHHHHHTT-SEEEESHH
T ss_pred             --EEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence              455443   38999999999999999654

ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=88.04  E-value=0.96  Score=35.46  Aligned_cols=43  Identities=26%  Similarity=0.336  Sum_probs=34.2

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHH---HHHHHhcCCCC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENA---ELMISKLGLSD  149 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~---~~~l~~~~l~~  149 (246)
                      ..+.||+.+.++.|++.|.++.++||++....   -++++++|+..
T Consensus        37 ~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~   82 (306)
T KOG2882|consen   37 EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS   82 (306)
T ss_pred             CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc
Confidence            56889999999999999999999999976443   34555667653

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=87.93  E-value=3.2  Score=38.83  Aligned_cols=72  Identities=11%  Similarity=0.025  Sum_probs=50.9

Q ss_pred             HHHHHHHHHhcCCCCcceEEEecC-----CCCCCCCChHHHHHHHHHcCCCCCcE-EEEecChh-hhHHHHhcCCC-EEE
Q 025896          135 RENAELMISKLGLSDFFQVVILGD-----ECERAKPFPDPYFKALEMLKVSKDHT-FVFEDSVS-GIKAGVAAGLP-VVG  206 (246)
Q Consensus       135 ~~~~~~~l~~~~l~~~f~~~~~~~-----~~~~~kp~~~~~~~~~~~~~~~~~~~-~~igD~~~-Di~~a~~~G~~-~i~  206 (246)
                      ...++..|+..++..  ..+++..     ..+..-.+..+++.+..+.|++.+++ +|+||+-| |++... .|.. +|.
T Consensus       923 v~elr~~Lr~~gLr~--~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll-~G~~~tvi  999 (1050)
T TIGR02468       923 VKELRKLLRIQGLRC--HAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLL-GGLHKTVI  999 (1050)
T ss_pred             HHHHHHHHHhCCCce--EEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHh-CCceeEEE
Confidence            356788888888773  3444432     23555667889999999999999999 56999998 988764 3443 444


Q ss_pred             EcC
Q 025896          207 LTT  209 (246)
Q Consensus       207 v~~  209 (246)
                      +..
T Consensus      1000 ~~g 1002 (1050)
T TIGR02468      1000 LKG 1002 (1050)
T ss_pred             Eec
Confidence            443

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function

Probab=87.40  E-value=0.37  Score=28.01  Aligned_cols=25  Identities=12%  Similarity=0.065  Sum_probs=16.1

Q ss_pred             HHHHHHHcCCCCCcEEEEecChhhhHHHH
Q 025896          170 YFKALEMLKVSKDHTFVFEDSVSGIKAGV  198 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~igD~~~Di~~a~  198 (246)
                      .+++++++|+    .+++||...|+++..
T Consensus         7 VqQLLK~fG~----~IY~gdr~~DielM~   31 (62)
T PF06014_consen    7 VQQLLKKFGI----IIYVGDRLWDIELME   31 (62)
T ss_dssp             HHHHHHTTS---------S-HHHHHHHHH
T ss_pred             HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence            4688999998    899999999998765

; PDB: 2NN4_A.

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=87.19  E-value=6.8  Score=34.35  Aligned_cols=91  Identities=14%  Similarity=0.233  Sum_probs=48.7

Q ss_pred             cHHHHHHHHHHcCCeEEEEeCCCHH---HHHHHHHhcCCC--CcceE--EEecCC--------CCCCCCChHHHHH-HHH
Q 025896          112 GLDKVKKWIEDRGLKRAAVTNAPRE---NAELMISKLGLS--DFFQV--VILGDE--------CERAKPFPDPYFK-ALE  175 (246)
Q Consensus       112 ~~~~~l~~l~~~g~~i~i~s~~~~~---~~~~~l~~~~l~--~~f~~--~~~~~~--------~~~~kp~~~~~~~-~~~  175 (246)
                      |+.++...++++||++.-+|.....   ..+..|..+.-+  .+-++  +++.+.        +-..||  +-|+. +|+
T Consensus       562 GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkP--e~FKIAcL~  639 (738)
T KOG2116|consen  562 GVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKP--EVFKIACLT  639 (738)
T ss_pred             hHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCc--hhhhHHHHH
Confidence            4667777778888888888876432   234444433211  11122  111111        122344  33332 233


Q ss_pred             ----HcCCCCCc-EEEEecChhhhHHHHhcCCCE
Q 025896          176 ----MLKVSKDH-TFVFEDSVSGIKAGVAAGLPV  204 (246)
Q Consensus       176 ----~~~~~~~~-~~~igD~~~Di~~a~~~G~~~  204 (246)
                          .+.-+.+- ...||...+|+..=+++|++.
T Consensus       640 DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~  673 (738)
T KOG2116|consen  640 DIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPL  673 (738)
T ss_pred             HHHHhcCCCCCceeeecCCCcccceeeeeecCCc
Confidence                23311111 567899999999999999973

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=87.15  E-value=1.7  Score=32.22  Aligned_cols=38  Identities=13%  Similarity=0.134  Sum_probs=32.6

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcC
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLG  146 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~  146 (246)
                      +.+.+.+.|++|+++|++++++|+++...+...++.++
T Consensus        18 ~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~   55 (204)
T TIGR01484        18 LSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP   55 (204)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence            34668899999999999999999999999888887643

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>COG0731 Fe-S oxidoreductases [Energy production and conversion]

Probab=86.30  E-value=3.5  Score=32.60  Aligned_cols=39  Identities=18%  Similarity=0.132  Sum_probs=31.7

Q ss_pred             ccCCCcccHHHHHHHHHHcC-CeEEEEeCCCHHHHHHHHH
Q 025896          105 EQLKPISGLDKVKKWIEDRG-LKRAAVTNAPRENAELMIS  143 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g-~~i~i~s~~~~~~~~~~l~  143 (246)
                      +...++|..-++++.+|+.| ++++++||+........+.
T Consensus        89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~~L~  128 (296)
T COG0731          89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLEELK  128 (296)
T ss_pred             CCcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHHHhc
Confidence            45678999999999999999 7999999998744444433

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=85.95  E-value=5.9  Score=31.61  Aligned_cols=84  Identities=13%  Similarity=0.118  Sum_probs=53.9

Q ss_pred             cCCCcccHHHHHHHHHHcC-CeEEEEeCCCHHH---HHHHHHhcCCC----------CcceEEEecCCCCCCCCChHHHH
Q 025896          106 QLKPISGLDKVKKWIEDRG-LKRAAVTNAPREN---AELMISKLGLS----------DFFQVVILGDECERAKPFPDPYF  171 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g-~~i~i~s~~~~~~---~~~~l~~~~l~----------~~f~~~~~~~~~~~~kp~~~~~~  171 (246)
                      ..+++||+-.+.+.|.+.| .++.-+||++...   +++++...++.          ..++.++.+...  .  +...+.
T Consensus       194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~--r--K~~~l~  269 (373)
T COG4850         194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAA--R--KGQSLR  269 (373)
T ss_pred             ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhh--h--cccHHH
Confidence            4678999999999999987 8899999997643   33444332221          223444433322  1  223345


Q ss_pred             HHHHHcCCCCCcEEEEecCh-hhhH
Q 025896          172 KALEMLKVSKDHTFVFEDSV-SGIK  195 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~igD~~-~Di~  195 (246)
                      .++.+  ....+.+.|||+- .|.+
T Consensus       270 nil~~--~p~~kfvLVGDsGE~Dpe  292 (373)
T COG4850         270 NILRR--YPDRKFVLVGDSGEHDPE  292 (373)
T ss_pred             HHHHh--CCCceEEEecCCCCcCHH
Confidence            56665  4447799999998 7874

>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]

Probab=85.33  E-value=5.1  Score=35.27  Aligned_cols=117  Identities=15%  Similarity=0.159  Sum_probs=73.4

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC-cce-EEEecCCC-----------------CCCCCChH
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD-FFQ-VVILGDEC-----------------ERAKPFPD  168 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~-----------------~~~kp~~~  168 (246)
                      +|..+..+.+++....|..+-++|+.......+.-+++|.-. .+. .-..+...                 +..--.|+
T Consensus       492 pprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpe  571 (942)
T KOG0205|consen  492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPE  571 (942)
T ss_pred             CCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHH
Confidence            346677888999889999999999998777777777776541 111 11111100                 11112233


Q ss_pred             HHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCC
Q 025896          169 PYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDY  228 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~  228 (246)
                      -...+.+.++-....|-+.||+.||..+.+++....... .   +-+.....+|.++...
T Consensus       572 hKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~---atdaar~asdiVltep  627 (942)
T KOG0205|consen  572 HKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-D---ATDAARSASDIVLTEP  627 (942)
T ss_pred             HHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-c---chhhhcccccEEEcCC
Confidence            344566666666677899999999999999998764333 2   2222334566666543

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=85.03  E-value=1.3  Score=33.81  Aligned_cols=63  Identities=13%  Similarity=0.010  Sum_probs=30.5

Q ss_pred             CCCChHHHHHHHHHcCCC---CCcEEEEecChhhhHHHHhcCCC-----EEEEcCCCChhhhhccCCcEEecC
Q 025896          163 AKPFPDPYFKALEMLKVS---KDHTFVFEDSVSGIKAGVAAGLP-----VVGLTTRNPEHVLLEANPTFLIKD  227 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~~---~~~~~~igD~~~Di~~a~~~G~~-----~i~v~~~~~~~~~~~~~~~~~i~~  227 (246)
                      ...|..+++.++++++..   +.-++++||...|-.+.+.+.-.     .+.|.....  ......|.|.+++
T Consensus       163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~--~~~~t~A~y~l~~  233 (235)
T PF02358_consen  163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSV--GEKPTAASYRLDD  233 (235)
T ss_dssp             T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-------------------
T ss_pred             CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecc--ccccccccccccc
Confidence            334678899999998875   77899999999999999987543     444433321  1222456666654

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]

Probab=83.92  E-value=0.92  Score=33.31  Aligned_cols=29  Identities=38%  Similarity=0.485  Sum_probs=21.2

Q ss_pred             ceEEEeCCCccccChhhHHHHHHHHHHHh
Q 025896           23 EAVLFDVDGTLCDSDPLHHYAFREMLQEI   51 (246)
Q Consensus        23 k~iifD~DGTL~~~~~~~~~~~~~~~~~~   51 (246)
                      -+++||+||||............+.++.+
T Consensus        12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~l   40 (252)
T KOG3189|consen   12 TLCLFDVDGTLTPPRQKVTPEMLEFLQKL   40 (252)
T ss_pred             eEEEEecCCccccccccCCHHHHHHHHHH
Confidence            37889999999998876655555555554

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=82.97  E-value=15  Score=29.97  Aligned_cols=96  Identities=14%  Similarity=0.107  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHc-CCe-EEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHH---HHHHHHHcCCCCCcEEEE
Q 025896          113 LDKVKKWIEDR-GLK-RAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDP---YFKALEMLKVSKDHTFVF  187 (246)
Q Consensus       113 ~~~~l~~l~~~-g~~-i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~---~~~~~~~~~~~~~~~~~i  187 (246)
                      ...+++.|+++ ++. .+++|+........+++.+++..-++..+.+......+--...   +.+++++  .+|+=++..
T Consensus        16 ~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDiv~~~   93 (365)
T TIGR00236        16 MAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLFHLPPDYDLNIMSPGQTLGEITSNMLEGLEELLLE--EKPDIVLVQ   93 (365)
T ss_pred             HHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHHHHHHHHHHHH--cCCCEEEEe
Confidence            45778888875 333 5678888877888888778887444433322111111111122   2233333  446556677


Q ss_pred             ecChhh---hHHHHhcCCCEEEEcCC
Q 025896          188 EDSVSG---IKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       188 gD~~~D---i~~a~~~G~~~i~v~~~  210 (246)
                      ||...-   ..+|+..|++.+++..|
T Consensus        94 gd~~~~la~a~aa~~~~ipv~h~~~g  119 (365)
T TIGR00236        94 GDTTTTLAGALAAFYLQIPVGHVEAG  119 (365)
T ss_pred             CCchHHHHHHHHHHHhCCCEEEEeCC
Confidence            887654   45667789999988544

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism

Probab=82.36  E-value=20  Score=27.53  Aligned_cols=96  Identities=15%  Similarity=0.027  Sum_probs=63.7

Q ss_pred             CCCcccHHHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHhcCCCCcce--EEEecCCCCCCCCChHHHHHHHHHcCCCC
Q 025896          107 LKPISGLDKVKKWIEDR---GLKRAAVTNAPRENAELMISKLGLSDFFQ--VVILGDECERAKPFPDPYFKALEMLKVSK  181 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~---g~~i~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~~~~~~~~~~~~  181 (246)
                      -.++|+..++++..+..   |+.+.-+++.+....+...+ +|-.-...  ..+.+   +.+..+++.++.+.+..++  
T Consensus       103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~-~G~~~vmPlg~pIGs---g~Gi~~~~~I~~I~e~~~v--  176 (248)
T cd04728         103 KTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED-AGCAAVMPLGSPIGS---GQGLLNPYNLRIIIERADV--  176 (248)
T ss_pred             cccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH-cCCCEeCCCCcCCCC---CCCCCCHHHHHHHHHhCCC--
Confidence            45688898998887777   99988677776666655444 45432211  12222   2344467888877776433  


Q ss_pred             CcEEEEecC---hhhhHHHHhcCCCEEEEcCC
Q 025896          182 DHTFVFEDS---VSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       182 ~~~~~igD~---~~Di~~a~~~G~~~i~v~~~  210 (246)
                        .+++|-+   +.|+..+.+.|...+++.+.
T Consensus       177 --pVI~egGI~tpeda~~AmelGAdgVlV~SA  206 (248)
T cd04728         177 --PVIVDAGIGTPSDAAQAMELGADAVLLNTA  206 (248)
T ss_pred             --cEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence              3555543   48999999999999999776

ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=82.23  E-value=4  Score=31.43  Aligned_cols=38  Identities=8%  Similarity=-0.105  Sum_probs=32.8

Q ss_pred             ccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC
Q 025896          111 SGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS  148 (246)
Q Consensus       111 ~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~  148 (246)
                      |.+.+++++++++|+.++++|++....++..+..+++.
T Consensus        24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~   61 (249)
T TIGR01485        24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLL   61 (249)
T ss_pred             HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCC
Confidence            44668889999999999999999999999988888765

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PLN02887 hydrolase family protein

Probab=82.14  E-value=3.1  Score=36.40  Aligned_cols=41  Identities=20%  Similarity=0.122  Sum_probs=36.3

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS  148 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~  148 (246)
                      .+.+...+.|++++++|+.++++|++....+...++.+++.
T Consensus       325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~  365 (580)
T PLN02887        325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA  365 (580)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence            35677889999999999999999999999999889888764

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=82.08  E-value=2.7  Score=32.83  Aligned_cols=40  Identities=3%  Similarity=-0.059  Sum_probs=33.8

Q ss_pred             CCCcccHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHhcC
Q 025896          107 LKPISGLDKVKKWIED-RGLKRAAVTNAPRENAELMISKLG  146 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~-~g~~i~i~s~~~~~~~~~~l~~~~  146 (246)
                      ..+.+.+.+.|+.|++ .|+.++|+|+++...+...+..++
T Consensus        35 ~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~   75 (266)
T PRK10187         35 VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYR   75 (266)
T ss_pred             ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCccc
Confidence            4566888899999998 699999999999998888876655

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=81.88  E-value=3.7  Score=36.44  Aligned_cols=40  Identities=18%  Similarity=0.242  Sum_probs=34.9

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      .+...+.|++|+++|++++++|+.....+...++.+++..
T Consensus       435 ~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~  474 (694)
T PRK14502        435 YSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKD  474 (694)
T ss_pred             CHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence            3456789999999999999999999999999999988753

>PTZ00174 phosphomannomutase; Provisional

Probab=81.42  E-value=3.5  Score=31.72  Aligned_cols=36  Identities=8%  Similarity=0.130  Sum_probs=29.5

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHh
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISK  144 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~  144 (246)
                      +.|...+.|++++++|+.++++|+++...+...+..
T Consensus        23 is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~   58 (247)
T PTZ00174         23 ITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGE   58 (247)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence            345577899999999999999999988877666653

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=80.56  E-value=1.1  Score=31.54  Aligned_cols=16  Identities=31%  Similarity=0.538  Sum_probs=13.7

Q ss_pred             ceEEEeCCCccccChh
Q 025896           23 EAVLFDVDGTLCDSDP   38 (246)
Q Consensus        23 k~iifD~DGTL~~~~~   38 (246)
                      +.+++|+||||+.+..
T Consensus         3 ~~lvldld~tl~~~~~   18 (148)
T smart00577        3 KTLVLDLDETLVHSTH   18 (148)
T ss_pred             cEEEEeCCCCeECCCC
Confidence            5789999999999753

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=80.38  E-value=3.8  Score=30.80  Aligned_cols=36  Identities=17%  Similarity=0.211  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC
Q 025896          113 LDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS  148 (246)
Q Consensus       113 ~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~  148 (246)
                      +.+.+.+|++.|++|+.+|+.....+...-+.+|+.
T Consensus        28 A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~   63 (274)
T COG3769          28 AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ   63 (274)
T ss_pred             cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence            458899999999999999999888888777888876

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=80.17  E-value=2.2  Score=35.37  Aligned_cols=18  Identities=39%  Similarity=0.571  Sum_probs=15.8

Q ss_pred             CCcceEEEeCCCccccCh
Q 025896           20 APLEAVLFDVDGTLCDSD   37 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~   37 (246)
                      ...|.|++|+||||..++
T Consensus       373 ~n~kiVVsDiDGTITkSD  390 (580)
T COG5083         373 NNKKIVVSDIDGTITKSD  390 (580)
T ss_pred             CCCcEEEEecCCcEEehh
Confidence            467899999999999876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	246
3kbb_A	216	Crystal Structure Of Putative Beta-Phosphoglucomuta		3e-18
2nyv_A	222	X-Ray Crystal Structure Of A Phosphoglycolate Phosp		1e-12
2yy6_A	213	Crystal Structure Of The Phosphoglycolate Phosphata		2e-12
3dv9_A	247	Putative Beta-Phosphoglucomutase From Bacteroides V		3e-10
2fdr_A	229	Crystal Structure Of Conserved Haloacid Dehalogenas		4e-10
3e58_A	214	Crystal Structure Of Putative Beta-Phosphoglucomuta		4e-09
4gib_A	250	2.27 Angstrom Crystal Structure Of Beta-Phosphogluc		9e-08
1o03_A	221	Structure Of Pentavalent Phosphorous Intermediate O		3e-07
3qyp_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		4e-07
3quq_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		4e-07
3fm9_A	221	Analysis Of The Structural Determinants Underlying		7e-07
3qub_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		7e-07
2ioh_A	267	Crystal Structure Of Phosphonoacetaldehyde Hydrolas		1e-06
2iof_A	267	Crystal Structure Of Phosphonoacetaldehyde Hydrolas		1e-06
2iof_K	267	Crystal Structure Of Phosphonoacetaldehyde Hydrolas		1e-06
3r9k_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		1e-06
3qu5_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		1e-06
3qut_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		1e-06
3nas_A	233	The Crystal Structure Of Beta-Phosphoglucomutase Fr		1e-06
4g9b_A	243	Crystal Structure Of Beta-Phosphoglucomutase Homolo		2e-06
1lvh_A	221	The Structure Of Phosphorylated Beta-phosphoglucomu		2e-06
4ex6_A	237	Crystal Structure Of The Alnumycin P Phosphatase Al		3e-06
3qu4_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		3e-06
1fez_A	256	The Crystal Structure Of Bacillus Cereus Phosphonoa		4e-06
1rql_A	267	Crystal Structure Of Phosponoacetaldehyde Hydrolase		5e-06
1swv_A	267	Crystal Structure Of The D12a Mutant Of Phosphonoac		6e-06
2hsz_A	243	Crystal Structure Of A Predicted Phosphoglycolate P		8e-06
1rdf_A	267	G50p Mutant Of Phosphonoacetaldehyde Hydrolase In C		1e-05
1te2_A	226	Putative Phosphatase Ynic From Escherichia Coli K12		4e-05
3l5k_A	250	The Crystal Structure Of Human Haloacid Dehalogenas		5e-05
4eek_A	259	Crystal Structure Of Had Family Hydrolase Dr_1622 F		2e-04
3d6j_A	225	Crystal Structure Of Putative Haloacid Dehalogenase		3e-04
3kzx_A	231	Crystal Structure Of A Had-Superfamily Hydrolase Fr		5e-04
2hoq_A	241	Crystal Structure Of The Probable Haloacid Dehaloge		6e-04

>pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 15/211 (7%)
Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFF--VENIAGKHNIDI--AK 78
           EAV+FD DG L D++PL+  A+R + +    + G P TED    +  +  +  + I    
Sbjct: 2   EAVIFDXDGVLXDTEPLYFEAYRRVAE----SYGKPYTEDLHRRIXGVPEREGLPILXEA 57
Query: 79  ILFPDDLPRGLKFC-EDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
           +   D L    K   E+K+ +F    SE LK   G+ +  ++++ + +K A  T+ P+  
Sbjct: 58  LEIKDSLENFKKRVHEEKKRVF----SELLKENPGVREALEFVKSKRIKLALATSTPQRE 113
Query: 138 AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAG 197
           A   + +L L  +F V + GD+ +  KP P+ Y   LE L V  +   VFEDS SG++A 
Sbjct: 114 ALERLRRLDLEKYFDVXVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAA 173
Query: 198 VAAGLP-VVGLT-TRNPEHVLLEANPTFLIK 226
            +AG+  + G+  + N    LLEA    L+K
Sbjct: 174 KSAGIERIYGVVHSLNDGKALLEAGAVALVK 204

>pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase From Aquifex Aeolicus Length = 222

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           L  +LFD+DGTL DS      A  + L+E+G  +  P   D   + I G     + K+L 
Sbjct: 3   LRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYP---DNVTKYIGGGVRALLEKVLK 59
Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQ----LKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
                   KF E+   +FRK   E      KP   +    + ++ +G K A V+N   E 
Sbjct: 60  D-------KFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEEL 112
Query: 138 AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAG 197
           ++ ++  L LS +F +++ GD     KP P P  K LE+L    +   +  D+ + I+AG
Sbjct: 113 SKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAG 172
Query: 198 VAAGLPV-------VGLTTRNPEHVLLEANPTFLIKDYDD 230
             AG          V L ++ P+  L  + P+ L+K  D+
Sbjct: 173 KRAGTKTALALWGYVKLNSQIPDFTL--SRPSDLVKLXDN 210

>pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From Aquifex Aeolicus Vf5 Length = 213

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD 83
            +LFD+DGTL DS      A  + L+E+G  +  P   D   + I G     + K+L   
Sbjct: 3   VILFDLDGTLIDSAKDIALALEKTLKELGLEEYYP---DNVTKYIGGGVRALLEKVLKD- 58
Query: 84  DLPRGLKFCEDKEAMFRKLASEQ----LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAE 139
                 KF E+   +FRK   E      KP   +    + ++ +G K A V+N   E ++
Sbjct: 59  ------KFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSK 112
Query: 140 LMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVA 199
            ++  L LS +F +++ GD     KP P P  K LE+L    +   +  D+ + I+AG  
Sbjct: 113 KILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKR 172
Query: 200 AGLPV-------VGLTTRNPEHVLLEANPTFLIKDYDD 230
           AG          V L ++ P+  L  + P+ L+K  D+
Sbjct: 173 AGTKTALALWGYVKLNSQIPDFTL--SRPSDLVKLXDN 208

>pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus Length = 247

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 28/232 (12%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           L+AVLFD DG L DS P H  ++ ++ +  GF  G+   E +  E   G   I+I     
Sbjct: 23  LKAVLFDXDGVLFDSXPNHAESWHKIXKRFGF--GLSREEAYXHEGRTGASTINIV---- 76
Query: 82  PDDLPRGLKFCED--------KEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNA 133
                RG    E+        K   F K    +  P  G  +V   I+  GL    VT +
Sbjct: 77  -SRRERGHDATEEEIKAIYQAKTEEFNKCPKAERXP--GALEVLTKIKSEGLTPXVVTGS 133
Query: 134 PRENAELMISKLG--LSDFFQ--VVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFED 189
            + +   ++ +L       FQ  + +   + +  KP P+PY  AL+      +   V E+
Sbjct: 134 GQTS---LLDRLNHNFPGIFQANLXVTAFDVKYGKPNPEPYLXALKKGGFKPNEALVIEN 190
Query: 190 SVSGIKAGVAAGLPVVGLTTRNPEH--VLLEANPTFLIKDYDD-PKLWSALE 238
           +  G++AGVAAG+  + + T  P H  VLL      L     D  K W  L+
Sbjct: 191 APLGVQAGVAAGIFTIAVNT-GPLHDNVLLNEGANLLFHSXPDFNKNWETLQ 241

>pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like Protein Of Unknown Function Atu0790 From Agrobacterium Tumefaciens Str. C58 Length = 229

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGK--HNIDIAKILFP 82
           ++FD DG L DS+ +       +L E G+    PI+ +   E  AG    NI + ++   
Sbjct: 7   IIFDCDGVLVDSEIIAAQVESRLLTEAGY----PISVEEXGERFAGXTWKNI-LLQVESE 61
Query: 83  DDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI 142
             +P      +  E +        +K I G   VK  +      R   +N+     +  +
Sbjct: 62  ASIPLSASLLDKSEKLLDXRLERDVKIIDG---VKFALSRLTTPRCICSNSSSHRLDXXL 118
Query: 143 SKLGLSDFFQVVILGDE---CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVA 199
           +K+GL  +F   I   +    +R KP PD +        VS D   V EDSV GI    A
Sbjct: 119 TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARA 178
Query: 200 AGLPVVGLTTRN---PEHV--LLEANP-TFLIKDYDDPKLWSALEELD 241
           AG  V+G T  +   P H   L +A   T + +  D P + +A  E +
Sbjct: 179 AGXRVIGFTGASHTYPSHADRLTDAGAETVISRXQDLPAVIAAXAEWE 226

>pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 10/192 (5%)
Query: 20  APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFN-DGVPITEDFFVENIAGKHNIDIAK 78
           A +EA++FD DG L D++  ++      L + G + D +P +  FF+    G +   + +
Sbjct: 3   AXVEAIIFDXDGVLFDTEKYYYDRRASFLGQKGISIDHLPPS--FFI----GGNTKQVWE 56
Query: 79  ILFPDDLPRG-LKFCEDKEAMFRKLASEQLKPISGLD--KVKKWIEDRGLKRAAVTNAPR 135
            +  D+  +  +   +++   +++      K +   D  KV   ++ +GL+    +++ +
Sbjct: 57  NILRDEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVK 116
Query: 136 ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK 195
            +    + +  L  FF +V+ G+E + +KP P+ Y  AL+ L V      + EDS  GI 
Sbjct: 117 ADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIA 176
Query: 196 AGVAAGLPVVGL 207
           AGVAA + V  +
Sbjct: 177 AGVAADVEVWAI 188

>pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 20  APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKI 79
           A +EA +FD+DG + D+   H+ A+R++  ++G +      E   ++ I+   ++D  +I
Sbjct: 24  AMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNES--LKGISRMESLD--RI 79
Query: 80  L------FPDDLPRGLKFCEDKEAMFRKLASEQLKP--ISGLDKVKKWIEDRGLKRAAVT 131
           L      +       ++  E+K   +  L  E      + G++ +   ++   +K     
Sbjct: 80  LEFGNKKYSFSEEEKVRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIG--L 137
Query: 132 NAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
           ++  +NA  +++ LG+SD F  +    +C+  KP P+ +  + + L V+  +    ED+ 
Sbjct: 138 SSASKNAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDAS 197
Query: 192 SGIKAGVAAGLPVVGL 207
           +GI A  +A +  VG+
Sbjct: 198 AGIDAINSANMFSVGV 213

>pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 13/193 (6%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNID-IAKIL 80
            +AVLFD+DG + D+   H  A++ + +EIG N GV   +  F E + G    D + KIL
Sbjct: 2   FKAVLFDLDGVITDTAEYHFRAWKALAEEIGIN-GV---DRQFNEQLKGVSREDSLQKIL 57
Query: 81  FPDDLPRGLKFCEDKEAMFRKLAS-----EQLKPISGLDKVKKWIED-RGLKRAAVTNAP 134
             D   + +   E KE   RK  +     + + P      + + ++D R  K      + 
Sbjct: 58  --DLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASA 115
Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
            +N   ++ ++ L+ +F  +    E   +KP PD +  A   + V+   +   EDS +GI
Sbjct: 116 SKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGI 175
Query: 195 KAGVAAGLPVVGL 207
           +A   +G   +G+
Sbjct: 176 QAIKDSGALPIGV 188

>pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium And Phosphate Length = 243

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           L+AVLFD+DG L +S P H  A+ ++++  G +      E+ ++ N  G+       I+F
Sbjct: 24  LKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLS---REEAYMHN--GRTGASTINIVF 78
Query: 82  PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
             +L +            +K  +F      +  P  G  ++ + ++  GL    VT + +
Sbjct: 79  QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
            +   ++ +L       F  ++++   + +  KP P+PY  AL+   +  D   V E++ 
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
            G++AG  AG+  + + T   +  VLL+A    L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227

>pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, An Open Cap Conformation Length = 243

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           L+AVLFD+DG L +S P H  A+ ++++  G +  +   E +  E   G   I+I   +F
Sbjct: 24  LKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLD--LSREEAYMHEGRTGASTINI---VF 78
Query: 82  PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
             +L +            +K  +F      +  P  G  ++ + ++  GL    VT + +
Sbjct: 79  QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
            +   ++ +L       F  ++++   + +  KP P+PY  AL+   +  D   V E++ 
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
            G++AG  AG+  + + T   +  VLL+A    L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227

>pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 13/193 (6%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNID-IAKIL 80
            +AVLFD+DG + D    H  A++ + +EIG N GV   +  F E + G    D + KIL
Sbjct: 2   FKAVLFDLDGVITDPAEYHFRAWKALAEEIGIN-GV---DRQFNEQLKGVSREDSLQKIL 57
Query: 81  FPDDLPRGLKFCEDKEAMFRKLAS-----EQLKPISGLDKVKKWIED-RGLKRAAVTNAP 134
             D   + +   E KE   RK  +     + + P      + + ++D R  K      + 
Sbjct: 58  --DLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASA 115
Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
            +N   ++ ++ L+ +F  +    E   +KP PD +  A   + V+   +   EDS +GI
Sbjct: 116 SKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGI 175
Query: 195 KAGVAAGLPVVGL 207
           +A   +G   +G+
Sbjct: 176 QAIKDSGALPIGV 188

>pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate Length = 243

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           L+AVLFD+DG L +S P H  A+ ++++  G +      E+ ++   AG+       I+F
Sbjct: 24  LKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLS---REEAYMH--AGRTGASTINIVF 78
Query: 82  PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
             +L +            +K  +F      +  P  G  ++ + ++  GL    VT + +
Sbjct: 79  QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
            +   ++ +L       F  ++++   + +  KP P+PY  AL+   +  D   V E++ 
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
            G++AG  AG+  + + T   +  VLL+A    L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227

>pdb|2IOH|A Chain A, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With A K53r Mutation Length = 267

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           +EAV+FD  GT  D      +A  E+  EI    GV IT +       G   ID  + L 
Sbjct: 6   IEAVIFDWAGTTVDYGC---FAPLEVFMEIFHKRGVAITAEE-ARKPMGLLRIDHVRAL- 60
Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
             ++PR      +   +FR+L +E                       PI+G+ +V   + 
Sbjct: 61  -TEMPR---IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLR 116
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
           +RG+K  + T   RE  +++  +  L  +    ++  D+    +P+P   +K A+E+   
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 176
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
             +H     D+VS +K G  AG+  VG+   + E  L E
Sbjct: 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215

>pdb|2IOF|A Chain A, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With Sodium Borohydride-Reduced Substrate Intermediate Length = 267

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           +EAV+FD  GT  D      +A  E+  EI    GV IT +       G   ID  + L 
Sbjct: 6   IEAVIFDWAGTTVDYGC---FAPLEVFMEIFHKRGVAITAEE-ARKPMGLLKIDHVRAL- 60
Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
             ++PR      +   +FR+L +E                       PI+G+ +V   + 
Sbjct: 61  -TEMPR---IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLR 116
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
           +RG+K  + T   RE  +++  +  L  +    ++  D+    +P+P   +K A+E+   
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 176
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
             +H     D+VS +K G  AG+  VG+   + E  L E
Sbjct: 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215

>pdb|2IOF|K Chain K, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With Sodium Borohydride-Reduced Substrate Intermediate Length = 267

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           +EAV+FD  GT  D      +A  E+  EI    GV IT +       G   ID  + L 
Sbjct: 6   IEAVIFDWAGTTVDYGC---FAPLEVFMEIFHKRGVAITAEE-ARKPMGLLXIDHVRAL- 60
Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
             ++PR      +   +FR+L +E                       PI+G+ +V   + 
Sbjct: 61  -TEMPR---IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLR 116
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
           +RG+K  + T   RE  +++  +  L  +    ++  D+    +P+P   +K A+E+   
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 176
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
             +H     D+VS +K G  AG+  VG+   + E  L E
Sbjct: 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215

>pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asp Mutant Complexed With Sulfate, A Closed Cap Conformation Length = 243

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           L+AVLFD+DG L +S P H  A+ ++++  G +  +   E +  +   G   I+I   +F
Sbjct: 24  LKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLD--LSREEAYMHDGRTGASTINI---VF 78
Query: 82  PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
             +L +            +K  +F      +  P  G  ++ + ++  GL    VT + +
Sbjct: 79  QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
            +   ++ +L       F  ++++   + +  KP P+PY  AL+   +  D   V E++ 
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
            G++AG  AG+  + + T   +  VLL+A    L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227

>pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp11asn Mutant Length = 243

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           L+AVLF++DG L +S P H  A+ ++++  G +  +   E +  E   G   I+I   +F
Sbjct: 24  LKAVLFNMDGVLFNSMPYHSEAWHQVMKTHGLD--LSREEAYMHEGRTGASTINI---VF 78
Query: 82  PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
             +L +            +K  +F      +  P  G  ++ + ++  GL    VT + +
Sbjct: 79  QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
            +   ++ +L       F  ++++   + +  KP P+PY  AL+   +  D   V E++ 
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
            G++AG  AG+  + + T   +  VLL+A    L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227

>pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13asn Mutant, An Open Cap Conformation Length = 243

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           L+AVLFD++G L +S P H  A+ ++++  G +  +   E +  E   G   I+I   +F
Sbjct: 24  LKAVLFDMNGVLFNSMPYHSEAWHQVMKTHGLD--LSREEAYMHEGRTGASTINI---VF 78
Query: 82  PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
             +L +            +K  +F      +  P  G  ++ + ++  GL    VT + +
Sbjct: 79  QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
            +   ++ +L       F  ++++   + +  KP P+PY  AL+   +  D   V E++ 
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
            G++AG  AG+  + + T   +  VLL+A    L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227

>pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDF--FVENIAGKHNIDI--- 76
           L+AV+FD+DG + D+   H  A++ + ++I     +P   D    ++ I+ + +++    
Sbjct: 2   LKAVIFDLDGVITDTAEYHFLAWKHIAEQI----DIPFDRDXNERLKGISREESLESILI 57
Query: 77  ---AKILFPDDLPRGL--KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVT 131
              A+  + +   + L  +   D + +  KL  E L P  G+ ++   +++  +K    +
Sbjct: 58  FGGAETKYTNAEKQELXHRKNRDYQXLISKLTPEDLLP--GIGRLLCQLKNENIKIGLAS 115
Query: 132 NAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
           ++   NA  ++ +L + D F  ++      + KP PD +  A   L VS       ED+ 
Sbjct: 116 SS--RNAPKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAXLDVSPADCAAIEDAE 173
Query: 192 SGIKAGVAAGLPVVGLTTRNP 212
           +GI A  +AG   VG+    P
Sbjct: 174 AGISAIKSAGXFAVGVGQGQP 194

>pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAG-KHNIDIAKIL 80
           L+ V+FD+DG + D+  LH  A++++  EIG +      +  F E++ G   +  + +IL
Sbjct: 5   LQGVIFDLDGVITDTAHLHFQAWQQIAAEIGIS-----IDAQFNESLKGISRDESLRRIL 59
Query: 81  FPDDLPRGLKFCEDKEAMFRK--LASEQLKPISG---LDKVKKWIEDRGLKRAAVTNAPR 135
                       E  +  +RK  L    L+ ++    L  ++  + D   ++ +V  A  
Sbjct: 60  QHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASV 119
Query: 136 E-NAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
             NA  +++ L L +FF       + + +KP P+ +  A   L V        ED+ +GI
Sbjct: 120 SLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGI 179
Query: 195 KAGVAAGLPVVGL 207
            A  A+G+  VG+
Sbjct: 180 DAINASGMRSVGI 192

>pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 13/193 (6%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNID-IAKIL 80
            +AVLF +DG + D+   H  A++ + +EIG N GV   +  F E + G    D + KIL
Sbjct: 2   FKAVLFXLDGVITDTAEYHFRAWKALAEEIGIN-GV---DRQFNEQLKGVSREDSLQKIL 57
Query: 81  FPDDLPRGLKFCEDKEAMFRKLAS-----EQLKPISGLDKVKKWIED-RGLKRAAVTNAP 134
             D   + +   E KE   RK  +     + + P      + + ++D R  K      + 
Sbjct: 58  --DLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASA 115
Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
            +N   ++ ++ L+ +F  +    E   +KP PD +  A   + V+   +   EDS +GI
Sbjct: 116 SKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGI 175
Query: 195 KAGVAAGLPVVGL 207
           +A   +G   +G+
Sbjct: 176 QAIKDSGALPIGV 188

>pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb Length = 237

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 15/193 (7%)
Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL-F 81
             V+ D+DGTL D+      A   +  E+    G  ++    +  +       +A +L  
Sbjct: 20  RGVILDLDGTLADTP----AAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGV 75
Query: 82  PDDLPRGLKFCEDKEAMF----RKLASEQLKP--ISGLDKVKKWIEDRGLKRAAVTNAPR 135
           P + PR  +  E+    F    R      L P  + GLD++        +  + V  A R
Sbjct: 76  PVEDPRVAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAAR 135
Query: 136 ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK 195
             AEL     GL     V+   D  ER KP PD        L +  +   V  D V   +
Sbjct: 136 AIAELT----GLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAE 191
Query: 196 AGVAAGLPVVGLT 208
            G AAG+ V+G++
Sbjct: 192 MGRAAGMTVIGVS 204

>pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13ala Mutant Length = 243

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           L+AVLFD+ G L +S P H  A+ ++++  G +  +   E +  E   G   I+I   +F
Sbjct: 24  LKAVLFDMAGVLFNSMPYHSEAWHQVMKTHGLD--LSREEAYMHEGRTGASTINI---VF 78
Query: 82  PDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
             +L +            +K  +F      +  P  G  ++ + ++  GL    VT + +
Sbjct: 79  QRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 136 ENAELMISKL--GLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
            +   ++ +L       F  ++++   + +  KP P+PY  AL+   +  D   V E++ 
Sbjct: 137 LS---LLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAP 193
Query: 192 SGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFL 224
            G++AG  AG+  + + T   +  VLL+A    L
Sbjct: 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLL 227

>pdb|1FEZ|A Chain A, The Crystal Structure Of Bacillus Cereus Phosphonoacetaldehyde Hydrolase Complexed With Tungstate, A Product Analog Length = 256

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           +EAV+FD  GT  D      +A  E+  EI    GV IT +       G   ID  + L 
Sbjct: 2   IEAVIFDWAGTTVDYGC---FAPLEVFMEIFHKRGVAITAEE-ARKPMGLLKIDHVRAL- 56
Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
             ++PR      +   +FR+L +E                       PI+ + +V   + 
Sbjct: 57  -TEMPR---IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLR 112
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
           +RG+K  + T   RE  +++  +  L  +    ++  D+    +P+P   +K A+E+   
Sbjct: 113 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 172
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
             +H     D+VS +K G  AG+  VG+   + E  L E
Sbjct: 173 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 211

>pdb|1RQL|A Chain A, Crystal Structure Of Phosponoacetaldehyde Hydrolase Complexed With Magnesium And The Inhibitor Vinyl Sulfonate Length = 267

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           +EAV+FD  GT  D      +A  E+  EI    GV IT +       G   ID  + L 
Sbjct: 6   IEAVIFDWAGTTVDYGC---FAPLEVFMEIFHKRGVAITAEE-ARKPMGLLKIDHVRAL- 60
Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
             ++PR      +   +FR+L +E                       PI+ + +V   + 
Sbjct: 61  -TEMPR---IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLR 116
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
           +RG+K  + T   RE  +++  +  L  +    ++  D+    +P+P   +K A+E+   
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 176
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
             +H     D+VS +K G  AG+  VG+   + E  L E
Sbjct: 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215

>pdb|1SWV|A Chain A, Crystal Structure Of The D12a Mutant Of Phosphonoacetaldehyde Hydrolase Complexed With Magnesium Length = 267

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           +EAV+F   GT  D      +A  E+  EI    GV IT +       G   ID  + L 
Sbjct: 6   IEAVIFAWAGTTVDYGC---FAPLEVFMEIFHKRGVAITAEE-ARKPMGLLKIDHVRAL- 60
Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
             ++PR      +   +FR+L +E                       PI+G+ +V   + 
Sbjct: 61  -TEMPR---IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLR 116
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
           +RG+K  + T   RE  +++  +  L  +    ++  D+    +P+P   +K A+E+   
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 176
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
             +H     D+VS +K G  AG+  VG+   + E  L E
Sbjct: 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215

>pdb|2HSZ|A Chain A, Crystal Structure Of A Predicted Phosphoglycolate Phosphatase (hs_0176) From Haemophilus Somnus 129pt At 1.90 A Resolution Length = 243

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 22/218 (10%)
Query: 27  FDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLP 86
           FD+DGTL +S P    +    L+++     +P   +  V    G      A +L    + 
Sbjct: 28  FDLDGTLVNSLPDLALSINSALKDVN----LPQASENLVXTWIGNG----ADVLSQRAVD 79
Query: 87  RGLK-----FCEDKEAMFRK----LASEQLKPISGL-DKVKKWIED---RGLKRAAVTNA 133
              K       ED+   F++       E L  IS L   VK+ +E    +G   A VTN 
Sbjct: 80  WACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNK 139
Query: 134 PRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSG 193
           P ++ + +++  G+   F   + G      KP P P++       +         DS + 
Sbjct: 140 PTKHVQPILTAFGIDHLFSEXLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQND 199
Query: 194 IKAGVAAGLPVVGLTTRNPEHV-LLEANPTFLIKDYDD 230
           I A  +AG  VVGLT     ++ + ++ P ++  D+ D
Sbjct: 200 IFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFAD 237

>pdb|1RDF|A Chain A, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex With Substrate Analogue Vinyl Sulfonate Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 31/219 (14%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           +EAV+FD  GT  D      +A  E+  EI    GV IT +        +  + + KI  
Sbjct: 6   IEAVIFDWAGTTVDYG---CFAPLEVFMEIFHKRGVAITAE------EARKPMPLLKIDH 56
Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQ--------------------LKPISGLDKVKKWIE 121
              L    +   +   +FR+L +E                       PI+ + +V   + 
Sbjct: 57  VRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLR 116
Query: 122 DRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFK-ALEMLKV 179
           +RG+K  + T   RE  +++  +  L  +    ++  D+    +P+P   +K A+E+   
Sbjct: 117 ERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY 176
Query: 180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
             +H     D+VS +K G  AG+  VG+   + E  L E
Sbjct: 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 215

>pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12 Length = 226

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 9/181 (4%)
Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFN----DGVPITEDFFVENIAGKHNIDIAKI 79
           A +FD DG L DS+PL   A  ++   +G +    + +P T    ++ +     +D+   
Sbjct: 11  AAIFDXDGLLIDSEPLWDRAELDVXASLGVDISRRNELPDTLGLRIDXV-----VDLWYA 65
Query: 80  LFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAE 139
             P + P   +  E   A    L  E    + G+ +     +++GL     + +P    E
Sbjct: 66  RQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHXLE 125
Query: 140 LMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVA 199
            +++   L D F  +   ++   +KP P  Y      L V        EDSV+G  A  A
Sbjct: 126 KVLTXFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGXIASKA 185
Query: 200 A 200
           A
Sbjct: 186 A 186

>pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 6   GENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFV 65
           G  ++  +   A   P+  ++FD+DG L D++ L+   F+E+           +      
Sbjct: 14  GTENLYFQSMAAPPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVK----- 68
Query: 66  ENIAGKHNIDIAKILFPD-DLPRGL-KFCEDKEAMFRKL-ASEQLKPISGLDKVKKWIED 122
             + GK  ++ A+I+     LP    +  E+ +   +++  +  L P  G +K+   +  
Sbjct: 69  SLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMP--GAEKLIIHLRK 126
Query: 123 RGLKRAAVTNAPRENAELMISKLG-LSDFFQVVILGD--ECERAKPFPDPYFKALEMLK- 178
            G+  A  T++   + ++  S+       F  ++LGD  E +  KP PD +    +    
Sbjct: 127 HGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSP 186
Query: 179 -VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRN 211
             + +   VFED+ +G++A +AAG+ VV +   N
Sbjct: 187 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGN 220

>pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) With Bound Phosphate And Sodium Length = 259

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 8/177 (4%)
Query: 20  APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFN-DGVPITEDFFVENIAGKHNIDIAK 78
           AP +AVLFD+DG L +S+ +    ++ +L E G + D   I   F  +   G     +A 
Sbjct: 26  APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGV----LAY 81
Query: 79  ILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENA 138
           +    D      F +  E  F   A   +  I G  +  + +   G+  A  +N+ R   
Sbjct: 82  LAQQHDFVPPPDFLDVLETRFNA-AMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRL 140
Query: 139 ELMISKLGLSDFFQVVILGDEC--ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSG 193
            L +   GL++     I        R KP PD Y  A + L +  +   V EDSV+G
Sbjct: 141 HLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTG 197

>pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like Hydrolase From Bacteroides Fragilis Length = 225

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 11/200 (5%)
Query: 26  LFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAG--KHNIDIAKILFPD 83
           LFD D TL DS       FR +L+  G+     IT+D     I    + +  I   +   
Sbjct: 10  LFDFDYTLADSSRGIVTCFRSVLERHGYTG---ITDDXIKRTIGKTLEESFSILTGITDA 66
Query: 84  DLPRGLKFCEDKEAMFRKLASEQLKP--ISGLDKVKKWIEDRGLKRAAVTNAPRENAELM 141
           D     +    KEA     A+  L P  +  L  +KK    +G++   ++   R      
Sbjct: 67  DQLESFRQEYSKEADIYXNANTILFPDTLPTLTHLKK----QGIRIGIISTKYRFRILSF 122
Query: 142 ISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAG 201
           +      D+F ++I G++    KP P+    A++ LK   +      DS        AAG
Sbjct: 123 LRNHXPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAG 182
Query: 202 LPVVGLTTRNPEHVLLEANP 221
           +   G+T+        +A P
Sbjct: 183 VSFTGVTSGXTTAQEFQAYP 202

>pdb|3KZX|A Chain A, Crystal Structure Of A Had-Superfamily Hydrolase From Ehrlichia Chaffeensis At 1.9a Resolution Length = 231

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 22/189 (11%)
Query: 24  AVLFDVDGTLCDSD-PLHHYAFREMLQEIGFN----DGVP-ITEDFFVENIAGKHNIDIA 77
           AV+FD   TL D+   +    F ++L ++G+     D +P  T   ++  + GK   + A
Sbjct: 27  AVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLDSIPNSTIPKYLITLLGKRWKE-A 85
Query: 78  KILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
            IL+ + L +  K       M    A E L  +          ++  +  A V+N   E 
Sbjct: 86  TILYENSLEKSQK---SDNFMLNDGAIELLDTL----------KENNITMAIVSNKNGER 132
Query: 138 AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS-KDHTFVFEDSVSGIKA 196
               I    L+ +F  +I   +    KP P+P   AL  + +      F   DS+S I++
Sbjct: 133 LRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQS 192
Query: 197 GVAAG-LPV 204
            + AG LP+
Sbjct: 193 AIEAGCLPI 201

>pdb|2HOQ|A Chain A, Crystal Structure Of The Probable Haloacid Dehalogenase (Ph1655) From Pyrococcus Horikoshii Ot3 Length = 241

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 13/194 (6%)
Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDF---------FVENIAGKH 72
           ++ + FD+D TL D+  L   A +  ++ +    G+P+  DF          ++      
Sbjct: 2   VKVIFFDLDDTLVDTSKLAEIARKNAIENM-IRHGLPV--DFETAYSELIELIKEYGSNF 58
Query: 73  NIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTN 132
                 +L   DLP   K+       +       L+ + G  KV   +++ G +   +T+
Sbjct: 59  PYHFDYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITD 118
Query: 133 APRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV- 191
                    I +L L DFF+ VI+ D     KP P  + KAL+   V  +   +  D + 
Sbjct: 119 GNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLY 178
Query: 192 SGIKAGVAAGLPVV 205
           S I      G+  V
Sbjct: 179 SDIYGAKRVGMKTV 192

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	246
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	4e-68
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	8e-68
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	8e-64
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	2e-61
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	4e-61
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	3e-59
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	1e-57
1te2_A	226	Putative phosphatase; structural genomics, phospha	4e-54
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	8e-51
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	1e-50
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	1e-48
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	2e-48
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	1e-43
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	3e-41
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	3e-38
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	2e-37
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	2e-32
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	2e-30
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	1e-29
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	2e-28
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	2e-27
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	3e-27
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	3e-27
2hsz_A	243	Novel predicted phosphatase; structural genomics,	5e-26
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	4e-25
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	1e-24
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	6e-23
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	3e-22
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	1e-21
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	3e-21
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	1e-20
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	9e-19
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	1e-18
2zg6_A	220	Putative uncharacterized protein ST2620, probable	2e-18
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	3e-17
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	5e-17
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	8e-17
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	1e-16
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	3e-16
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	1e-15
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	3e-15
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	6e-15
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	4e-13
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	7e-13
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	1e-12
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	6e-12
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	1e-10
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	2e-10
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	2e-10
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	3e-10
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	4e-10
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	4e-10
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	2e-09
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	3e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	6e-04

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275

 Score =  210 bits (536), Expect = 4e-68
 Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 16/230 (6%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL 80
            + A LFDVDGT+  S P     +R+  ++  + D      +  +    G    D     
Sbjct: 34  KINAALFDVDGTIIISQPAIAAFWRDFGKDKPYFD-----AEHVIHISHGWRTYDAIAKF 88

Query: 81  FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAV-TNAPRENAE 139
            PD      ++    E    +   E    + G  K+   +     ++ AV T+  R+ A+
Sbjct: 89  APDFADE--EYVNKLEGEIPEKYGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAK 146

Query: 140 LMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV-------SKDHTFVFEDSVS 192
                L +    +  I  ++ ++ KP P+PY K    L         SK    VFED+ +
Sbjct: 147 KWFDILKI-KRPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPA 205

Query: 193 GIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK 242
           GI AG AAG  +VG+ T      L E     ++K+++  ++     E D+
Sbjct: 206 GIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGEYNAETDE 255

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229

 Score =  207 bits (530), Expect = 8e-68
 Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 17/233 (7%)

Query: 19  LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAK 78
           ++  + ++FD DG L DS+ +       +L E G     PI+ +   E  AG    +I  
Sbjct: 1   MSGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAG----YPISVEEMGERFAGMTWKNILL 56

Query: 79  ILFPD-DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
            +  +  +P      +  E +        +K I G   VK  +      R   +N+    
Sbjct: 57  QVESEASIPLSASLLDKSEKLLDMRLERDVKIIDG---VKFALSRLTTPRCICSNSSSHR 113

Query: 138 AELMISKLGLSDFFQVVILGDE---CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
            ++M++K+GL  +F   I   +    +R KP PD +        VS D   V EDSV GI
Sbjct: 114 LDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGI 173

Query: 195 KAGVAAGLPVVGLTTRNPEH-----VLLEANPTFLIKDYDD-PKLWSALEELD 241
               AAG+ V+G T  +  +      L +A    +I    D P + +A+ E +
Sbjct: 174 HGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAEWE 226

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247

 Score =  192 bits (490), Expect = 2e-61
 Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 16/233 (6%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL 80
            L+AVLFD+DG L DS P H  ++ ++++  GF     ++ +       G+       I+
Sbjct: 22  DLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGF----GLSREEA-YMHEGRTGASTINIV 76

Query: 81  FPDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAP 134
              +              + K   F K    +  P  G  +V   I+  GL    VT + 
Sbjct: 77  SRRERGHDATEEEIKAIYQAKTEEFNKCPKAERMP--GALEVLTKIKSEGLTPMVVTGSG 134

Query: 135 RENAELMISK-LGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSG 193
           + +    ++          +++   + +  KP P+PY  AL+      +   V E++  G
Sbjct: 135 QTSLLDRLNHNFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLG 194

Query: 194 IKAGVAAGLPVVGLTTRN-PEHVLLEANPTFLIKDYDD-PKLWSALEELDKNK 244
           ++AGVAAG+  + + T    ++VLL      L     D  K W  L+   K  
Sbjct: 195 VQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETLQSALKQD 247

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score =  190 bits (486), Expect = 4e-61
 Identities = 47/229 (20%), Positives = 86/229 (37%), Gaps = 14/229 (6%)

Query: 18  KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIA 77
            L P  + +FD+DGTL DS   +  A++E L         P+          G     + 
Sbjct: 2   SLRPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENI----PLAMWRI-HRKIGMSGGLML 56

Query: 78  KILFPD-----DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTN 132
           K L  +        +  +  E     + +L   Q+  + G  ++ + ++   LK    T+
Sbjct: 57  KSLSRETGMSITDEQAERLSEKHAQAYERLQ-HQIIALPGAVELLETLDKENLKWCIATS 115

Query: 133 APRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVS 192
              + A + +  L L      ++  D+    KP PD +  A + +    D   V  D++ 
Sbjct: 116 GGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIW 175

Query: 193 GIKAGVAAGLPVVGLTTRN-PEHVLLEANPTFLIKDYDDPKLWSALEEL 240
            + A        VGL +       L  A    + +D  D  L + L+E+
Sbjct: 176 DMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLD--LLNHLDEI 222

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score =  186 bits (475), Expect = 3e-59
 Identities = 48/228 (21%), Positives = 96/228 (42%), Gaps = 17/228 (7%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL 80
            L+AVLFD+DG L +S P H  A+ ++++  G    + ++ +       G+       I+
Sbjct: 23  KLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHG----LDLSREEA-YMHEGRTGASTINIV 77

Query: 81  FPDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAP 134
           F  +L +            +K  +F      +  P  G  ++ + ++  GL    VT + 
Sbjct: 78  FQRELGKEATQEEIESIYHEKSILFNSYPEAERMP--GAWELLQKVKSEGLTPMVVTGSG 135

Query: 135 RENAELMISK-LGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSG 193
           + +    +          ++++   + +  KP P+PY  AL+   +  D   V E++  G
Sbjct: 136 QLSLLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLG 195

Query: 194 IKAGVAAGLPVVGLTTRN-PEHVLLEANPTFLIKDYDDPKLWSALEEL 240
           ++AG  AG+  + + T      VLL+A    L        L  + + +
Sbjct: 196 VEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQT--LCDSWDTI 241

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259

 Score =  182 bits (465), Expect = 1e-57
 Identities = 56/229 (24%), Positives = 92/229 (40%), Gaps = 15/229 (6%)

Query: 20  APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKI 79
           AP +AVLFD+DG L +S+ +    ++ +L E G    + +          G+    +   
Sbjct: 26  APFDAVLFDLDGVLVESEGIIAQVWQSVLAERG----LHLDLTEIAMYFTGQRFDGVLAY 81

Query: 80  LFPD-DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENA 138
           L    D      F +  E  F    +  +  I G  +  + +   G+  A  +N+ R   
Sbjct: 82  LAQQHDFVPPPDFLDVLETRFNAAMTG-VTAIEGAAETLRALRAAGVPFAIGSNSERGRL 140

Query: 139 ELMISKLGLSDFFQVVIL--GDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKA 196
            L +   GL++     I        R KP PD Y  A + L +  +   V EDSV+G  A
Sbjct: 141 HLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAA 200

Query: 197 GVAAGLPVVGLTT-----RNPEHVLLEANPTFLIKDYDDPKLWSALEEL 240
           G+AAG  + GL        +    L       ++  + +  L +AL E 
Sbjct: 201 GLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAE--LRAALAEA 247

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226

 Score =  173 bits (440), Expect = 4e-54
 Identities = 43/213 (20%), Positives = 82/213 (38%), Gaps = 7/213 (3%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL 80
            + A +FD+DG L DS+PL   A  +++  +G    V I+    + +  G     +  + 
Sbjct: 8   QILAAIFDMDGLLIDSEPLWDRAELDVMASLG----VDISRRNELPDTLGLRIDMVVDLW 63

Query: 81  ---FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
               P + P   +  E   A    L  E    + G+ +     +++GL     + +P   
Sbjct: 64  YARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHM 123

Query: 138 AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAG 197
            E +++   L D F  +   ++   +KP P  Y      L V        EDSV+G+ A 
Sbjct: 124 LEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIAS 183

Query: 198 VAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD 230
            AA +  + +     ++          +    +
Sbjct: 184 KAARMRSIVVPAPEAQNDPRFVLANVKLSSLTE 216

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score =  164 bits (417), Expect = 8e-51
 Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 10/214 (4%)

Query: 20  APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKI 79
           A +EA++FD+DG L D++  ++      L + G    + I          G +   + + 
Sbjct: 3   AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKG----ISIDHLPP-SFFIGGNTKQVWEN 57

Query: 80  LFPDDLPR--GLKFCEDKEAMFRKLASEQLKPI-SGLDKVKKWIEDRGLKRAAVTNAPRE 136
           +  D+  +       E+     +       + I   + KV   ++ +GL+    +++ + 
Sbjct: 58  ILRDEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKA 117

Query: 137 NAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKA 196
           +    + +  L  FF +V+ G+E + +KP P+ Y  AL+ L V      + EDS  GI A
Sbjct: 118 DIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAA 177

Query: 197 GVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD 230
           GVAA + V  +           A    L+    D
Sbjct: 178 GVAADVEVWAIRDNEFGMDQSAAK--GLLDSLTD 209

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221

 Score =  163 bits (416), Expect = 1e-50
 Identities = 46/226 (20%), Positives = 93/226 (41%), Gaps = 19/226 (8%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
            +AVLFD+DG + D+   H  A++ + +EIG    +   +  F E + G    D  + + 
Sbjct: 2   FKAVLFDLDGVITDTAEYHFRAWKALAEEIG----INGVDRQFNEQLKGVSREDSLQKIL 57

Query: 82  -----PDDLPRGLKFCEDKEAMFRKLASE--QLKPISGLDKVKKWIEDRGLKRAAVTNAP 134
                        +  + K   + K+  +        G+ ++ K +    +K A  + + 
Sbjct: 58  DLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK 117

Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
             N   ++ ++ L+ +F  +    E   +KP PD +  A   + V+   +   EDS +GI
Sbjct: 118 --NGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGI 175

Query: 195 KAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL 240
           +A   +G   +G+        L +     ++ D     L   L+E+
Sbjct: 176 QAIKDSGALPIGVGR---PEDLGDDI--VIVPDTSHYTL-EFLKEV 215

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233

 Score =  159 bits (404), Expect = 1e-48
 Identities = 49/234 (20%), Positives = 99/234 (42%), Gaps = 21/234 (8%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL- 80
           L+AV+FD+DG + D+   H  A++ + ++I     +P   D   E + G    +  + + 
Sbjct: 2   LKAVIFDLDGVITDTAEYHFLAWKHIAEQID----IPFDRDMN-ERLKGISREESLESIL 56

Query: 81  ------FPDDLPRGLKFCEDKEAMFRKLASE--QLKPISGLDKVKKWIEDRGLKRAAVTN 132
                          +    K   ++ L S+      + G+ ++   +++  +K    ++
Sbjct: 57  IFGGAETKYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASS 116

Query: 133 APRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVS 192
               NA  ++ +L + D F  ++      + KP PD +  A  ML VS       ED+ +
Sbjct: 117 --SRNAPKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEA 174

Query: 193 GIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNKDA 246
           GI A  +AG+  VG+        +L A+   +++   D  L    EE ++ +  
Sbjct: 175 GISAIKSAGMFAVGVGQ---GQPMLGAD--LVVRQTSDLTLELLHEEWEQYRIR 223

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243

 Score =  159 bits (403), Expect = 2e-48
 Identities = 46/234 (19%), Positives = 94/234 (40%), Gaps = 20/234 (8%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL 80
            L+ V+FD+DG + D+  LH  A++++  EIG    + I   F  E++ G    +  + +
Sbjct: 4   KLQGVIFDLDGVITDTAHLHFQAWQQIAAEIG----ISIDAQFN-ESLKGISRDESLRRI 58

Query: 81  F-------PDDLPRGLKFCEDKEAMFRKLASE--QLKPISGLDKVKKWIEDRGLKRAAVT 131
                     +     +    K  ++     E      + G+  +   +  + +     +
Sbjct: 59  LQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLAS 118

Query: 132 NAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
            +   NA  +++ L L +FF       + + +KP P+ +  A   L V        ED+ 
Sbjct: 119 VSL--NAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQ 176

Query: 192 SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNKD 245
           +GI A  A+G+  VG+        LL  +     +    P+L +  + + +N  
Sbjct: 177 AGIDAINASGMRSVGIGAGLTGAQLLLPS----TESLTWPRLSAFWQNVAENLY 226

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277

 Score =  147 bits (372), Expect = 1e-43
 Identities = 43/250 (17%), Positives = 87/250 (34%), Gaps = 23/250 (9%)

Query: 11  ESKDALAKLAPLEAVLFDVDGTLCDSDPLHHY-AFREMLQEIGFNDGVPITEDFFVENIA 69
             K  +    P+EA++ D  GT  D   L    AF E+ ++ G    + +T+        
Sbjct: 3   MLKANVFCAGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEG----IEVTQAEA-REPM 57

Query: 70  GKHNIDIAKILF---------------PDDLPRGLKFCEDKEAMFRKLASEQLKPISGLD 114
           G    +  + +                  +     +  +    +  ++ +++ + I G  
Sbjct: 58  GTEKSEHIRRMLGNSRIANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWK 117

Query: 115 KVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF-FQVVILGDECERAKPFPDPYFKA 173
           +V   +  +G+K    T          +       +     +   +  R +PFPD   K 
Sbjct: 118 EVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKV 177

Query: 174 LEMLKVS-KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPK 232
              L+V   +     +D++ GI+ G+ AG+  VG++    E  L   +   L  D     
Sbjct: 178 ALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSY 237

Query: 233 LWSALEELDK 242
              A + L  
Sbjct: 238 RQHAEQRLFN 247

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250

 Score =  140 bits (356), Expect = 3e-41
 Identities = 49/228 (21%), Positives = 101/228 (44%), Gaps = 18/228 (7%)

Query: 17  AKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDI 76
           A   P+  ++FD+DG L D++ L+   F+E+            + D     + GK  ++ 
Sbjct: 25  APPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDK----KYSWDVK-SLVMGKKALEA 79

Query: 77  AKIL---FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNA 133
           A+I+       + +  +  E+ +   +++       + G +K+   +   G+  A  T++
Sbjct: 80  AQIIIDVLQLPMSKE-ELVEESQTKLKEVF-PTAALMPGAEKLIIHLRKHGIPFALATSS 137

Query: 134 PRENAELMISKL-GLSDFFQVVILGDECE--RAKPFPDPYFKALEMLKV--SKDHTFVFE 188
              + ++  S+       F  ++LGD+ E    KP PD +    +      + +   VFE
Sbjct: 138 RSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFE 197

Query: 189 DSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD--PKLW 234
           D+ +G++A +AAG+ VV +   N    L     T ++    D  P+L+
Sbjct: 198 DAPNGVEAALAAGMQVVMVPDGNLSRDLTT-KATLVLNSLQDFQPELF 244

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score =  132 bits (334), Expect = 3e-38
 Identities = 40/215 (18%), Positives = 81/215 (37%), Gaps = 11/215 (5%)

Query: 16  LAKLAPLEAVLFDVDGTLCDSDP-LHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNI 74
              +    AV+FD   TL D+   +    F ++L ++G+        D   ++I      
Sbjct: 19  PGSMKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYK-----NIDL--DSIPNSTIP 71

Query: 75  DIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAP 134
                L            E+  ++ +   S+      G  ++   +++  +  A V+N  
Sbjct: 72  KYLITLLGKRWKEATILYEN--SLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKN 129

Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF-EDSVSG 193
            E     I    L+ +F  +I   +    KP P+P   AL  + +       F  DS+S 
Sbjct: 130 GERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISD 189

Query: 194 IKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDY 228
           I++ + AG   +   + N    +L     + I+++
Sbjct: 190 IQSAIEAGCLPIKYGSTNIIKDILSFKNFYDIRNF 224

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score =  131 bits (330), Expect = 2e-37
 Identities = 49/263 (18%), Positives = 92/263 (34%), Gaps = 47/263 (17%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHY-AFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKI 79
            +EAV+F   GT  D         F E+  + G    V IT +   + +       +  +
Sbjct: 5   KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRG----VAITAEEARKPMGLLKIDHVRAL 60

Query: 80  LFPDDLPRGLK--------------FCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGL 125
                +                     E+ E +   +      PI+G+ +V   + +RG+
Sbjct: 61  TEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGI 120

Query: 126 KRAAVTNAPRENAELMISKLGLSDFFQ-VVILGDECERAKPFPDPYFKALEMLKVS-KDH 183
           K  + T   RE  +++  +  L  +    ++  D+    +P+P   +K    L V   +H
Sbjct: 121 KIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH 180

Query: 184 TFVFEDSVSGIKAGVAAGLPVVGLTT------------------------RNPEHVLLEA 219
                D+VS +K G  AG+  VG+                              +  +E 
Sbjct: 181 MIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVEN 240

Query: 220 NPTFLIKDYDDPKLWSALEELDK 242
              F I+   +  L S +E ++K
Sbjct: 241 GAHFTIETMQE--LESVMEHIEK 261

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234

 Score =  117 bits (294), Expect = 2e-32
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 10/220 (4%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD 83
            VLFD+DGTL   + ++     + L E+   +G   + D F   + G    ++   +  +
Sbjct: 6   LVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHD-FSGKMDGAIIYEVLSNVGLE 64

Query: 84  DLPRGLKFCEDKEAMFR----KLASEQLKPISGLDKVKKWIEDRGLKRAAV-TNAPRENA 138
                 KF + KE        +   E +  + G+ ++   +  R      + T     + 
Sbjct: 65  RAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASG 124

Query: 139 ELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEML---KVSKDHTFVFEDSVSGIK 195
              +   G+  +F      D+       P    +    +     S     +  D+   I+
Sbjct: 125 RHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIR 184

Query: 196 AGVAAGLPVVGLTT-RNPEHVLLEANPTFLIKDYDDPKLW 234
                    + + T       L    P  L K++ +    
Sbjct: 185 CARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEV 224

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score =  111 bits (281), Expect = 2e-30
 Identities = 44/222 (19%), Positives = 77/222 (34%), Gaps = 8/222 (3%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL 80
                LFD D TL DS       FR +L+  G+     IT+D  ++   GK   +   IL
Sbjct: 5   KYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYT---GITDDM-IKRTIGKTLEESFSIL 60

Query: 81  FPD-DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAE 139
               D  +   F ++         +               ++ +G++   ++   R    
Sbjct: 61  TGITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRIL 120

Query: 140 LMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVA 199
             +      D+F ++I G++    KP P+    A++ LK   +      DS        A
Sbjct: 121 SFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAA 180

Query: 200 AGLPVVGLTT-RNPEHVLLEANPTFLIKDYDDPKLWSALEEL 240
           AG+   G+T+               +I       L S  E+ 
Sbjct: 181 AGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQ--LISVPEDK 220

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score =  108 bits (273), Expect = 1e-29
 Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 19/194 (9%)

Query: 18  KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIA 77
           K       ++D+ GTL D+      AF E L   G         D   + +         
Sbjct: 2   KGMKYHDYIWDLGGTLLDNYETSTAAFVETLALYGI----TQDHDSVYQAL--------- 48

Query: 78  KILFPDDLPRGLKFCEDKEAMFRK---LASEQLKPISGLDKVKKWIEDRGLKRAAVTNAP 134
           K+  P  +       E+    +++      E      G+  + + I ++G +   V++  
Sbjct: 49  KVSTPFAIETFAPNLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRN 108

Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
            +  E++  K  ++ +F  V+      + KP P+      E  ++S     V  D    I
Sbjct: 109 DQVLEIL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISS--GLVIGDRPIDI 165

Query: 195 KAGVAAGLPVVGLT 208
           +AG AAGL     T
Sbjct: 166 EAGQAAGLDTHLFT 179

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score =  106 bits (266), Expect = 2e-28
 Identities = 39/194 (20%), Positives = 70/194 (36%), Gaps = 20/194 (10%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITED---FFVENIAGKHNIDIA 77
             +A++FD+DGTL +S P +    RE+L   G              F           + 
Sbjct: 3   TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKP---FSPAQAQKTFPMAAEQA----MT 55

Query: 78  KILFPDDLPRGLKFCEDKEAMFRKL---ASEQLKPISGLDKVKKWIEDRGLKRAAVTNAP 134
           ++             +  +A +  +     +Q++   G+  + + +    L+   VT+  
Sbjct: 56  ELGIAASEF------DHFQAQYEDVMASHYDQIELYPGITSLFEQLP-SELRLGIVTSQR 108

Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
           R   E  +          V I  D+  + KP P P   ALE + V+  +     DSVS  
Sbjct: 109 RNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDE 168

Query: 195 KAGVAAGLPVVGLT 208
           +   AA +      
Sbjct: 169 QTAQAANVDFGLAV 182

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score =  103 bits (259), Expect = 2e-27
 Identities = 35/196 (17%), Positives = 74/196 (37%), Gaps = 8/196 (4%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFP 82
            A ++D+DGTL DS         E   +       P  ++   E I      D+   +  
Sbjct: 5   TAFIWDLDGTLLDSYEAILSGIEETFAQFSI----PYDKEKVREFIFKYSVQDLLVRVAE 60

Query: 83  DDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI 142
           D     ++      A      + Q+  + G  +V  W ++ G+++   T+     A  ++
Sbjct: 61  DR-NLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTIL 118

Query: 143 SKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGL 202
             LG+  +F  ++        KP P+     L+  +++ D+T+   D    ++    +G+
Sbjct: 119 KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGI 178

Query: 203 PVVGLT--TRNPEHVL 216
             +     T    H +
Sbjct: 179 QSINFLESTYEGNHRI 194

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score =  103 bits (259), Expect = 3e-27
 Identities = 54/228 (23%), Positives = 88/228 (38%), Gaps = 26/228 (11%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL 80
            L  +LFD+DGTL DS      A  + L+E+G         D  V    G       + L
Sbjct: 2   SLRVILFDLDGTLIDSAKDIALALEKTLKELGLE---EYYPDN-VTKYIGGG----VRAL 53

Query: 81  FPDDLPRGLKFCEDKEAM------FRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAP 134
               L + LK    +E +      + +      KP   +    + ++ +G K A V+N  
Sbjct: 54  ----LEKVLKDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKL 109

Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
            E ++ ++  L LS +F +++ GD     KP P P  K LE+L    +   +  D+ + I
Sbjct: 110 EELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADI 169

Query: 195 KAGVAAGLPVVGLT--TRNPEHVLLEANPTFLIKDYDDPKLWSALEEL 240
           +AG  AG                     P F +    D  L   ++  
Sbjct: 170 EAGKRAGTKTALALWGYVKLN----SQIPDFTLSRPSD--LVKLMDNH 211

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score =  103 bits (258), Expect = 3e-27
 Identities = 43/206 (20%), Positives = 82/206 (39%), Gaps = 24/206 (11%)

Query: 18  KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIA 77
            L+ ++  +FD+DGTL  +       F  + + +     +P  +D  + ++A        
Sbjct: 2   SLSEIKHWVFDMDGTLTIAVH----DFAAIREALS----IPAEDDI-LTHLAA------- 45

Query: 78  KILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
             L  D+      +  +      +  ++  +P  G  ++ + +  RG +   +T   RE 
Sbjct: 46  --LPADESAAKHAWLLE----HERDLAQGSRPAPGAVELVRELAGRGYRLGILTRNAREL 99

Query: 138 AELMISKLGLSDFF-QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKA 196
           A + +  +GL+D F +  +LG +    KP P    K  E   VS     +  D    +  
Sbjct: 100 AHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDC 159

Query: 197 GVAAGLPVVGLTT-RNPEHVLLEANP 221
           G AAG   V +    NP   L + + 
Sbjct: 160 GRAAGTRTVLVNLPDNPWPELTDWHA 185

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243

 Score =  100 bits (252), Expect = 5e-26
 Identities = 42/239 (17%), Positives = 87/239 (36%), Gaps = 28/239 (11%)

Query: 16  LAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFF----------- 64
              +   + + FD+DGTL +S P    +    L+++        +E+             
Sbjct: 17  FQGMTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLP---QASENLVMTWIGNGADVL 73

Query: 65  VENIAGKHNIDIAKILFPDDLPRGLK-FCEDKEAMFRKLASEQLKPISGLDKVKKWIEDR 123
            +           K L  D+     + F       + +      +    + +  + ++ +
Sbjct: 74  SQRAVDWACKQAEKELTEDEFKYFKRQFGFY----YGENLCNISRLYPNVKETLEALKAQ 129

Query: 124 GLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH 183
           G   A VTN P ++ + +++  G+   F  ++ G      KP P P++       +    
Sbjct: 130 GYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQ 189

Query: 184 TFVFEDSVSGIKAGVAAGLPVVGLT----TRNPEHVLLEANPTFLIKDYDDPKLWSALE 238
                DS + I A  +AG  VVGLT       P   + ++ P ++  D+ D  +    +
Sbjct: 190 ILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIP---IAQSKPDWIFDDFAD--ILKITQ 243

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 98.0 bits (245), Expect = 4e-25
 Identities = 38/224 (16%), Positives = 78/224 (34%), Gaps = 13/224 (5%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFP 82
             VLFD+DGTL DS      + +  L +        + +   +    G          + 
Sbjct: 5   NYVLFDLDGTLTDSAEGITKSVKYSLNKFDI----QVEDLSSLNKFVGPPLKTSFMEYYN 60

Query: 83  DDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI 142
            D        +     F+     + K   G++ +   ++D G      T+ P   ++ ++
Sbjct: 61  FDEETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQIL 120

Query: 143 SKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGL 202
               L+ +F  ++      +     D    A+E L +  D   +  D    +   +   L
Sbjct: 121 EHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNL 180

Query: 203 PVVGLT----TRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK 242
           P +G+T    +      L  A   +++   D+  L   + EL +
Sbjct: 181 PSIGVTYGFGSYEE---LKNAGANYIVNSVDE--LHKKILELRE 219

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 97.1 bits (242), Expect = 1e-24
 Identities = 46/217 (21%), Positives = 79/217 (36%), Gaps = 11/217 (5%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENI------AGKHNIDIA 77
            + FD+D TL D+  L   A +  ++ +    G+P+  +     +       G +     
Sbjct: 4   VIFFDLDDTLVDTSKLAEIARKNAIENMI-RHGLPVDFETAYSELIELIKEYGSNFPYHF 62

Query: 78  KILFPD-DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRE 136
             L    DLP   K+       +       L+ + G  KV   +++ G +   +T+    
Sbjct: 63  DYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPV 122

Query: 137 NAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDS-VSGIK 195
                I +L L DFF+ VI+ D     KP P  + KAL+   V  +   +  D   S I 
Sbjct: 123 KQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIY 182

Query: 196 AGVAAGLPVVGLTTRNPEHVLLEAN--PTFLIKDYDD 230
                G+  V           LE      + I + + 
Sbjct: 183 GAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLES 219

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240

 Score = 92.4 bits (230), Expect = 6e-23
 Identities = 39/237 (16%), Positives = 79/237 (33%), Gaps = 28/237 (11%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITE---------DFFVENIAGKHNI 74
           A +FD+DGT+ D+      A     ++ G      + +            V         
Sbjct: 6   AAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAG 65

Query: 75  DIAKILFPDDLPRGLKFCEDKEAMFRKL-----------ASEQLKPISGLDKVKKWIEDR 123
              + L               +    ++              +  P  G+  + K +  +
Sbjct: 66  SSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQK 125

Query: 124 GLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH 183
           G+K A V+N P E  ++++ +L     F   +      R KP PD   + +++L V +D 
Sbjct: 126 GVKLAVVSNKPNEAVQVLVEEL-FPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDK 184

Query: 184 TFVFEDSVSGIKAGVAAGLPVVGLT---TRNPEHVLLEANPTFLIKDYDDPKLWSAL 237
                DS   I+    + +  + +       P   L +   T ++   +   L  A+
Sbjct: 185 CVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPF--LQKHGATVIVDTAEK--LEEAI 237

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 90.4 bits (225), Expect = 3e-22
 Identities = 35/213 (16%), Positives = 75/213 (35%), Gaps = 13/213 (6%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFP 82
           E VLFD+DGTL D       + +  L   G         +  ++   G    D  K  + 
Sbjct: 30  EIVLFDLDGTLTDPKEGITKSIQYSLNSFGI----KEDLEN-LDQFIGPPLHDTFKEYYK 84

Query: 83  DDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI 142
            +  +  +  E     F      + K    + ++ + +   G      T+ P   AE ++
Sbjct: 85  FEDKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETIL 144

Query: 143 SKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS-KDHTFVFEDSVSGIKAGVAAG 201
               +  +F+ +   +         +     L++  V  KD   +  D    I      G
Sbjct: 145 RYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIG 204

Query: 202 LPVVGLT----TRNPEHVLLEANPTFLIKDYDD 230
           +  +G+     +      + E+ PT+++++ + 
Sbjct: 205 IDSIGVLYGYGSFEE---ISESEPTYIVENVES 234

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 88.7 bits (220), Expect = 1e-21
 Identities = 43/238 (18%), Positives = 80/238 (33%), Gaps = 18/238 (7%)

Query: 19  LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAK 78
           +  ++ V FDV  TL D + +      ++ +  G +    +           K     A 
Sbjct: 1   MREVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHI-KDVANAVIEVRNEIKKMRAQAS 59

Query: 79  ILFPDDLPRGL-----KFCEDKEAMFRKLA-----SEQLKPISGLDKVKKWIEDRGLKRA 128
                 L         K   D E + R  A      ++   + G  +  +++++RGLK A
Sbjct: 60  EDPRKVLTGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTA 119

Query: 129 AVTNAPRENAELMISKL---GLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF 185
            + N            L   GL +F       DE    KP  + + K L   +V  + + 
Sbjct: 120 VIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESL 179

Query: 186 VFEDSVSG-IKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK 242
              D+ +   +     G+  V +  +  + V       F I    +  L   +E + K
Sbjct: 180 HIGDTYAEDYQGARKVGMWAVWI-NQEGDKVRKLEERGFEIPSIAN--LKDVIELISK 234

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260

 Score = 88.3 bits (219), Expect = 3e-21
 Identities = 39/248 (15%), Positives = 91/248 (36%), Gaps = 30/248 (12%)

Query: 18  KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHN---- 73
            L+ + AV FD+D TL D+         E+++ +          +   + +  K +    
Sbjct: 14  GLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECF 73

Query: 74  -------IDIAKILFPDDLPR------GLKFCEDKEAMFRKLASEQLKPISG----LDKV 116
                   D+    + + +          K  E+   +++    + +         L ++
Sbjct: 74  HPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTEL 133

Query: 117 KKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEM 176
           +K      ++   +TN  R+     I       +F  +++G E +  KP P  ++   ++
Sbjct: 134 RK-----EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDL 188

Query: 177 LKVSKDHTFVFEDSVSG-IKAGVAAGL-PVVGLTTRNPEHVLLEANPTFLIKDYDDPKLW 234
           L V      +  D++   I+ G+ AGL   V +       +     P +++    +  L 
Sbjct: 189 LGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLE--LP 246

Query: 235 SALEELDK 242
           + L+ +D 
Sbjct: 247 ALLQSIDC 254

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210

 Score = 85.6 bits (213), Expect = 1e-20
 Identities = 36/218 (16%), Positives = 72/218 (33%), Gaps = 24/218 (11%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGK-HNIDIAKI 79
            + A+ FD+DGTL DS    H AF    +E+G     P  +   +    G       A  
Sbjct: 3   SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGV----PSPDAKTIRGFMGPPLESSFATC 58

Query: 80  LFPDDLPRGLK-FCEDKEAMFRKLASEQLKPISG----LDKVKKWIEDRGLKRAAVTNAP 134
           L  D +   ++ +       ++     + +        L+++              T   
Sbjct: 59  LSKDQISEAVQIYRSY----YKAKGIYEAQLFPQIIDLLEELS-----SSYPLYITTTKD 109

Query: 135 RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGI 194
              A+ M   L +  FF  +         K   D   +AL+  +++ +   +  D+   +
Sbjct: 110 TSTAQDMAKNLEIHHFFDGIYGSSPEAPHK--ADVIHQALQTHQLAPEQAIIIGDTKFDM 167

Query: 195 KAGVAAGLPVVGLT--TRNPEHVLLEANPTFLIKDYDD 230
                 G+  + +T         LL   P ++     +
Sbjct: 168 LGARETGIQKLAITWGFGEQAD-LLNYQPDYIAHKPLE 204

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 83.3 bits (205), Expect = 9e-19
 Identities = 35/255 (13%), Positives = 82/255 (32%), Gaps = 40/255 (15%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFP 82
           +  L  +D      + +    +  + +       V     F ++        ++ +  + 
Sbjct: 131 QLPLQFLDNVKVGKNNI----YAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYL 186

Query: 83  -DDLPRGLKFCEDKEAMFRKLASEQ--LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAE 139
              L   ++    +         ++  L+P+  +  +   ++  G +    T  P     
Sbjct: 187 GSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETV 246

Query: 140 LMISKLGLSDFFQV--VILGDECERA-----------KPFPDPYFKAL------------ 174
           +    LGL  +F+   +    +   A           KP P  Y  AL            
Sbjct: 247 VPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYI 306

Query: 175 --EMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTT----RNPEHVLLEANPTFLIKDY 228
             +   V+KD  F+  DS++ + +    G   +G  T    ++    L   +  ++I   
Sbjct: 307 NKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366

Query: 229 DDPKLWSALEELDKN 243
            +  L   L+ L ++
Sbjct: 367 GE--LRGVLDNLLEH 379

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240

 Score = 81.3 bits (201), Expect = 1e-18
 Identities = 40/243 (16%), Positives = 82/243 (33%), Gaps = 32/243 (13%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGV-----------PITEDFFVENIAGKH 72
            + FD+D T+          F E+ Q+  F+                  + ++E   GK 
Sbjct: 7   NLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKV 66

Query: 73  NID---------IAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDR 123
             +           + +  +D     +F ED    F  +   +   +    +V +++  +
Sbjct: 67  TKEELNRQRFFYPLQAVGVEDEALAERFSED----FFAIIPTKSGLMPHAKEVLEYLAPQ 122

Query: 124 GLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH 183
                 ++N  RE     +   G+  +F+ +IL ++    KP P+ +  AL   +     
Sbjct: 123 -YNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRE 181

Query: 184 TFVFEDSVSG-IKAGVAAGLPVVGLTTRNPEH-VLLEANPTFLIKDYDDPKLWSALEELD 241
           + +  DS    I      G+        N     +    PT+ I    +  L + LE   
Sbjct: 182 SLMIGDSWEADITGAHGVGMHQAFY---NVTERTVFPFQPTYHIHSLKE--LMNLLEGHH 236

Query: 242 KNK 244
            + 
Sbjct: 237 HHH 239

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 79.8 bits (197), Expect = 2e-18
 Identities = 39/232 (16%), Positives = 78/232 (33%), Gaps = 28/232 (12%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIA------GKHNIDI 76
           +AVL D   TL    P+ +    ++L++     G  +         A         + D 
Sbjct: 4   KAVLVDFGNTLVGFKPVFYEKVYQVLKDN----GYDLDLRKVFRAYAKAMGMINYPDEDG 59

Query: 77  AKILFPDDLPRGLKFCEDKEAMFRKLA-----SEQLKPISGLDKVKKWIEDRGLKRAAVT 131
            + + P D    L      E + ++L        +        +  + ++  G K A V+
Sbjct: 60  LEHVDPKDFLYILGI-YPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVS 118

Query: 132 NAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
           NA     + ++ K  L  +F  + L  E +  KP P  +  AL  +     H     D  
Sbjct: 119 NASPR-VKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYPAVH---VGDIY 174

Query: 192 -SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK 242
                    + +  + L   +        +    +K+  +      +EE++K
Sbjct: 175 ELDYIGAKRSYVDPILL---DRYD--FYPDVRDRVKNLRE--ALQKIEEMNK 219

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 76.2 bits (188), Expect = 3e-17
 Identities = 32/187 (17%), Positives = 68/187 (36%), Gaps = 19/187 (10%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFP 82
           +A+ +D+ G L  +         ++ Q  G +     T+DF   +      +++ ++   
Sbjct: 5   KALFWDIGGVLLTNGW-DREQRADVAQRFGLD-----TDDFTERHRLAAPELELGRM-TL 57

Query: 83  DDLPRGLKF---CEDKEAMFRKLASEQLKPISG----LDKVKKWIEDRGLKRAAVTNAPR 135
            +    + F    +     FR +  EQ +P          + +       +  ++ N  R
Sbjct: 58  AEYLEQVVFYQPRDFTPEDFRAVMEEQSQPRPEVLALARDLGQ-----RYRMYSLNNEGR 112

Query: 136 ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK 195
           +  E  I   GL +F             KP P  Y   L + +V  +   + +D +  ++
Sbjct: 113 DLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQ 172

Query: 196 AGVAAGL 202
           A  A G+
Sbjct: 173 AARAVGM 179

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238

 Score = 76.6 bits (189), Expect = 5e-17
 Identities = 45/224 (20%), Positives = 82/224 (36%), Gaps = 22/224 (9%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDG-------VPITEDFFVENIAGKHNID 75
             +LFDVD T+ D       A R + ++               I +  +     GK   D
Sbjct: 8   RTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRD 67

Query: 76  IAKILFPDDLPRGLKFCEDKEAM---FRKLASEQLKPISG----LDKVKKWIEDRGLKRA 128
                    L +   +  D   +   +R+   E  + I G    +  +++          
Sbjct: 68  EVVNTRFSALLKEYGYEADGALLEQKYRRFLEEGHQLIDGAFDLISNLQQ-----QFDLY 122

Query: 129 AVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALE-MLKVSKDHTFVF 187
            VTN         +   GL  FF+ + + ++    KP  + +    E + + S +HT + 
Sbjct: 123 IVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLII 182

Query: 188 EDSVSG-IKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD 230
            DS++  IK G  AGL    +      +V  E  PT+ I+  ++
Sbjct: 183 GDSLTADIKGGQLAGLDTCWMNPDMKPNV-PEIIPTYEIRKLEE 225

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 73.6 bits (181), Expect = 8e-17
 Identities = 18/111 (16%), Positives = 38/111 (34%)

Query: 99  FRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGD 158
           +  +     +       +    +  G+    ++N P       I +L  +     V+L  
Sbjct: 9   YAGVLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSG 68

Query: 159 ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTT 209
           E    KP    +  A + + +      + +DS+  ++  V AGL  V    
Sbjct: 69  ELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQ 119

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196

 Score = 74.6 bits (183), Expect = 1e-16
 Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 10/159 (6%)

Query: 87  RGLKFC----EDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI 142
            GL  C      + A       E  +   G     K + D+G+  A +   P   +    
Sbjct: 11  FGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTP-- 68

Query: 143 SKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS-KDHTFVFEDSVSGIKAGVAAG 201
                +     +I         P PD  + AL  L VS  +   +       +++G+ AG
Sbjct: 69  ---LAAPVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAG 125

Query: 202 LPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL 240
           L  +GL +  P   L  +    L     + +   A  +L
Sbjct: 126 LWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKL 164

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 74.3 bits (183), Expect = 3e-16
 Identities = 43/236 (18%), Positives = 81/236 (34%), Gaps = 25/236 (10%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVP---------ITEDFFVENIAGKHN- 73
           AV FD  GTL   +       + M + +G     P         +T + F       +  
Sbjct: 4   AVFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRP 63

Query: 74  -IDIAKILFPDDLPR-GLKFCEDKEAMFRKLASEQLKPISG----LDKVKKWIEDRGLKR 127
             DI + +      + G K+ E+   +  +++    +        L  +K          
Sbjct: 64  LRDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSLKG-----KYHV 118

Query: 128 AAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF 187
             +T++  E A   +  LG+ D F  +   +E    KP P  +  AL+   V  +     
Sbjct: 119 GMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV 178

Query: 188 EDS-VSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK 242
            D+ V         G+  + L  R  E         F++ D  +  +   ++EL+ 
Sbjct: 179 GDNPVKDCGGSKNLGMTSILL-DRKGEKREFWDKCDFIVSDLRE--VIKIVDELNG 231

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240

 Score = 72.6 bits (178), Expect = 1e-15
 Identities = 38/239 (15%), Positives = 75/239 (31%), Gaps = 19/239 (7%)

Query: 12  SKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPIT--------EDF 63
             D    +  L A +FD  GTL D       A      E+G      ++        E  
Sbjct: 4   KDDDDKLVDSLRACVFDAYGTLLDVHS----AVMRNADEVG-ASAEALSMLWRQRQLEYS 58

Query: 64  FVENIAGKH-NIDIAKILFPDDLPRGLKFCEDKEAMFRKLAS--EQLKPISGLDKVKKWI 120
           +   +  ++ +             R     ED++ +  +L S  ++L       +  + +
Sbjct: 59  WTRTLMHQYADFWQLTDEALTFALRTYHL-EDRKGLKDRLMSAYKELSAYPDAAETLEKL 117

Query: 121 EDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS 180
           +  G   A ++N   E  +  +    L       +  D+ +  KP P  Y  A + L V+
Sbjct: 118 KSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVN 177

Query: 181 KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE 239
            +       +   +      G   V +  +        A     +    +  LW  L +
Sbjct: 178 PNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSE--LWPLLAK 234

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232

 Score = 71.4 bits (175), Expect = 3e-15
 Identities = 35/221 (15%), Positives = 73/221 (33%), Gaps = 27/221 (12%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFF--------VENIAGKHNI 74
           + + FD+ GTL D             +      G  I+  +         + ++  ++  
Sbjct: 5   KGIAFDLYGTLFDVHS----VVGRCDEAFP-GRGREISALWRQKQLEYTWLRSLMNRY-- 57

Query: 75  DIAKILFPDDLPRGLKF--------CEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLK 126
               + F       L+F         + +       A  +L P S +    + ++ RGLK
Sbjct: 58  ----VNFQQATEDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLK 113

Query: 127 RAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV 186
            A ++N   ++ + ++S  GL D F  ++  D  +  KP    Y  A + L + +     
Sbjct: 114 LAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF 173

Query: 187 FEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD 227
              +          G P   +         +   P + +  
Sbjct: 174 VASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS 214

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 71.0 bits (174), Expect = 6e-15
 Identities = 35/245 (14%), Positives = 78/245 (31%), Gaps = 25/245 (10%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFN-DGVPITEDFF---------VENIAGKHN 73
            + +DV  TL         A+    +  G   +   + + F            N    H 
Sbjct: 3   LLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHG 62

Query: 74  ID--------IAKILFPDDLPRGLKFCEDKEAMFRKLAS-EQLKPISGLDKVKKWIEDRG 124
           +         + +      +          E +++  +     + + G +   +    RG
Sbjct: 63  LTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRG 122

Query: 125 LKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT 184
           L+ A ++N  R   E ++  LGL + F  V+  +     KP P  + +AL +  +     
Sbjct: 123 LRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVA 181

Query: 185 FVFEDSVSG-IKAGVAAGLPVVGLTTRNPEHVLL--EANPTFLIKDYDDPKLWSALEELD 241
               D+     +   A G+    +        ++        ++       L  AL+ L+
Sbjct: 182 AHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAH--LLPALDCLE 239

Query: 242 KNKDA 246
            + + 
Sbjct: 240 GSAEN 244

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251

 Score = 66.2 bits (161), Expect = 4e-13
 Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 20/201 (9%)

Query: 19  LAPLEAVLFDVDGTLCDSDPLHHYA---FREMLQEIGFNDGVPITEDFFVENIAGKHNID 75
              ++ V FD D TL  S+  +  A   F  +L          + +              
Sbjct: 10  GQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFG 69

Query: 76  I-AKILFPDDLPRGLKFCEDK---------EAMFRKLASEQLKPISGLDKVKKWIEDRGL 125
             AK +    +   ++  E +           + R      ++ I+G+ +    I     
Sbjct: 70  YGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAIAADY- 128

Query: 126 KRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF 185
               +T     + E  I + GLSD F  + +      ++  P  Y + L    +  +   
Sbjct: 129 AVVLITKGDLFHQEQKIEQSGLSDLFPRIEV-----VSEKDPQTYARVLSEFDLPAERFV 183

Query: 186 VFEDSV-SGIKAGVAAGLPVV 205
           +  +S+ S ++  +A G   +
Sbjct: 184 MIGNSLRSDVEPVLAIGGWGI 204

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234

 Score = 64.9 bits (158), Expect = 7e-13
 Identities = 32/226 (14%), Positives = 78/226 (34%), Gaps = 22/226 (9%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIG-FNDGVPITEDFFVENIAGKHNIDIAKIL 80
           ++ + FD D TL  ++P      ++    +  +     I+   F   +     +      
Sbjct: 8   IKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYGAKA 67

Query: 81  FPDDLPRGLKFCEDKE----------AMFRKLASEQLKPISGLDKVKKWIEDRGL-KRAA 129
           F   +        + +           + + L    ++ + G+ +  K +++ G  K   
Sbjct: 68  FTISMVETALQISNGKIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVV 127

Query: 130 VTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFED 189
            T     + E  + + GLS +F  + +  +    K     Y + L +L+++     +  +
Sbjct: 128 ATKGDLLDQENKLERSGLSPYFDHIEVMSD----KT-EKEYLRLLSILQIAPSELLMVGN 182

Query: 190 SV-SGIKAGVAAGLPVV----GLTTRNPEHVLLEANPTFLIKDYDD 230
           S  S I+  ++ G   V     +  ++             +K  DD
Sbjct: 183 SFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDD 228

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282

 Score = 64.8 bits (157), Expect = 1e-12
 Identities = 40/239 (16%), Positives = 83/239 (34%), Gaps = 20/239 (8%)

Query: 15  ALAKLAPLEAVLFDVDGTLCDSDPLHHYAFRE-MLQEIGFNDGVPITEDFFVENIAGKHN 73
           A  +   L+   FD+D  L  S    H   ++ +L+    +  +   +   + N   K  
Sbjct: 50  ATPQNPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEY 109

Query: 74  IDIAK---ILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGL--KRA 128
               +   +    +     +  +D   +        LKP   L  +   +   G   K  
Sbjct: 110 GLAIRGLVMFHKVNALEYNRLVDDSLPLQDI-----LKPDIPLRNMLLRLRQSGKIDKLW 164

Query: 129 AVTNAPRENAELMISKLGLS----DFFQVVILGDECERAKPFPDPYFKALEMLKVS-KDH 183
             TNA + +A   +  LG++              +    KP    + KA++   ++  ++
Sbjct: 165 LFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYEN 224

Query: 184 TFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANP--TFLIKDYDDPKLWSALEEL 240
            +  +DS   I+ G+  G+        N  + +L   P    +I D  +  L   + +L
Sbjct: 225 AYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILE--LPHVVSDL 281

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253

 Score = 62.6 bits (152), Expect = 6e-12
 Identities = 48/234 (20%), Positives = 80/234 (34%), Gaps = 17/234 (7%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFF--------VENIAGKHNI 74
           +AV+FD  GTL D   +   A            G  IT+ +         +  + G++  
Sbjct: 3   KAVVFDAYGTLFDVQSVAD-ATERAYPG----RGEYITQVWRQKQLEYSWLRALMGRY-A 56

Query: 75  DIAKILFPDDLPRGLK--FCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTN 132
           D   +   + L   L     E  E+    +A    +     D  +   E   LKRA ++N
Sbjct: 57  DFWSV-TREALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSN 115

Query: 133 APRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVS 192
              +  + +++  GL+D F  VI  D     KP PD Y    E+L V+         +  
Sbjct: 116 GAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGF 175

Query: 193 GIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNKDA 246
            +      G  V  +   + E +  E     +        L    E   +  D 
Sbjct: 176 DVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDF 229

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231

 Score = 58.7 bits (141), Expect = 1e-10
 Identities = 35/216 (16%), Positives = 66/216 (30%), Gaps = 18/216 (8%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKH-NIDIAKILF 81
              LFD D TL D+D +       M++E G  +     E F  E +  +    D    L 
Sbjct: 12  IVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIF--ETLRTELGYADYLGALQ 69

Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELM 141
              L +         + F        +   G     + +  RG     +++         
Sbjct: 70  RYRLEQPRDTRLLLMSSFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRK 128

Query: 142 ISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAA- 200
           I++ GL D  +  +L     +             M      H  + +D +  + A   A 
Sbjct: 129 IARSGLWDEVEGRVLI-YIHKELMLDQ------VMECYPARHYVMVDDKLRILAAMKKAW 181

Query: 201 GLPVVGLTTR------NPEHVLLEANPTFLIKDYDD 230
           G  +  +  R      +P+ +         ++   D
Sbjct: 182 GARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGD 217

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 23/183 (12%), Positives = 57/183 (31%), Gaps = 9/183 (4%)

Query: 24  AVLFDVDGTLCDSDP---LHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL 80
             +FD+   + D D    L  ++    +             + F ++  G+ + +     
Sbjct: 9   LYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFH-MGEAFHQHERGEISDEAFAEA 67

Query: 81  FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAEL 140
              ++          E       +  +     +  +   + ++G +   ++N  R +   
Sbjct: 68  LCHEMAL----PLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTF 123

Query: 141 MISKL-GLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVA 199
              +   + D    + L  +    KP    Y   L+    S   T  F+D+   I+    
Sbjct: 124 WPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQ 183

Query: 200 AGL 202
            G+
Sbjct: 184 LGI 186

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 25/196 (12%), Positives = 58/196 (29%), Gaps = 19/196 (9%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNI--DIAKIL- 80
            ++FD+ G L   +     + R          GV   E+     +     +  +  +   
Sbjct: 7   NIVFDLGGVLIHLNR--EESIRRF-----KAIGVADIEEMLDPYLQKGLFLDLESGRKSE 59

Query: 81  --FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENA 138
             F  +L R +      + ++  L     +  +        +     +   ++N      
Sbjct: 60  EEFRTELSRYIGKELTYQQVYDALLGFLEEISAEKFDYIDSLR-PDYRLFLLSNTNPYVL 118

Query: 139 ELMISK------LGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVS 192
           +L +S         L  FF  V    +  + KP  D + + +    +  + T   +D  +
Sbjct: 119 DLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGPA 178

Query: 193 GIKAGVAAGLPVVGLT 208
            +      G       
Sbjct: 179 NVATAERLGFHTYCPD 194

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261

 Score = 57.9 bits (139), Expect = 3e-10
 Identities = 33/248 (13%), Positives = 67/248 (27%), Gaps = 38/248 (15%)

Query: 20  APLEAVLFDVDGTLCDS----DPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNID 75
           A +  +L D++GT        D L  Y    + + +  +      +   V  +  +   D
Sbjct: 8   AEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQD-VSLLRKQAEED 66

Query: 76  IAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVK------------------ 117
                            +D + M + +       +S   K                    
Sbjct: 67  AHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGR 126

Query: 118 -------------KWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVI-LGDECERA 163
                        +   + G+K    ++   E  +L+       D  ++V    D     
Sbjct: 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGH 186

Query: 164 KPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR-NPEHVLLEANPT 222
           K   + Y K  + +  S ++     D      A   A + V  +    N      E    
Sbjct: 187 KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYY 246

Query: 223 FLIKDYDD 230
            LI  + +
Sbjct: 247 SLITSFSE 254

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240

 Score = 57.5 bits (139), Expect = 4e-10
 Identities = 39/207 (18%), Positives = 68/207 (32%), Gaps = 30/207 (14%)

Query: 18  KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIA 77
           +L   +A+ FD  GTL D +     A + + +      G   T D  +E      +    
Sbjct: 2   QLTDFKALTFDCYGTLIDWETGIVNALQPLAKRT----GKTFTSDELLEVFGRNESPQQT 57

Query: 78  K---ILFPDDLPRGLKFCEDK------EAMFRKLAS--EQLKP----ISGLDKVKKWIED 122
           +    L+ D L         +       A   +  +  +        +  L  +KK    
Sbjct: 58  ETPGALYQDILRAVYDRIAKEWGLEPDAAEREEFGTSVKNWPAFPDTVEALQYLKK---- 113

Query: 123 RGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPY---FKALEMLKV 179
              K   ++N  R   +L  +KLG+   F  +I   +    KP P+ +     AL    +
Sbjct: 114 -HYKLVILSNIDRNEFKLSNAKLGV--EFDHIITAQDVGSYKPNPNNFTYMIDALAKAGI 170

Query: 180 SKDHTFVFEDSVSG-IKAGVAAGLPVV 205
            K       +S+         AGL   
Sbjct: 171 EKKDILHTAESLYHDHIPANDAGLVSA 197

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201

 Score = 56.8 bits (137), Expect = 4e-10
 Identities = 34/212 (16%), Positives = 77/212 (36%), Gaps = 27/212 (12%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD 83
            + FD+ GT+ D+  +      + L            E  ++  I GK+ ++  +I    
Sbjct: 3   ILAFDIFGTVLDTSTVIQEFRNKQL------------EYTWLLTIMGKY-VEFEEITK-I 48

Query: 84  DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMIS 143
            L   LK   + E+ F +  ++     +  D           +  A++N      +  + 
Sbjct: 49  TLRYILKVRGE-ESKFDEELNKWKNLKAYEDTKYLKEISEIAEVYALSNGSINEVKQHLE 107

Query: 144 KLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSK-----DHTFVFEDSVSGIKAGV 198
           + GL  +F+ +   +  +  KP P  Y   L+ +   +      + F   D    +    
Sbjct: 108 RNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIGAKEAFLVSSNAF---D----VIGAK 160

Query: 199 AAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD 230
            AG+  + +  +N     +   P  ++ D+ +
Sbjct: 161 NAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKE 192

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 55.2 bits (133), Expect = 2e-09
 Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 19/191 (9%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENI-----AGKHNIDIA 77
           + +L D+ G L + D        E  ++IGF +         ++ I      G       
Sbjct: 29  KNLLIDLGGVLINLDRERCI---ENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEF 85

Query: 78  KILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPREN 137
           +    + + + +      + +     S  +   +    +   + ++      ++N    +
Sbjct: 86  RDGIREMMGKMV----SDKQIDAAWNSFLVDIPTYKLDLLLKLREKY-VVYLLSNTNDIH 140

Query: 138 AELMIS------KLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
            + +           + D+F+   L  E + AKP P+ +    E   +    TF  +DS 
Sbjct: 141 WKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSE 200

Query: 192 SGIKAGVAAGL 202
              K     G+
Sbjct: 201 INCKVAQELGI 211

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score = 54.0 bits (130), Expect = 3e-09
 Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 11/149 (7%)

Query: 105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL---GLSDFFQVVILGDECE 161
            ++       +  + ++  G K+A ++N    + E++   L   G+ D+F  +   +   
Sbjct: 31  PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSEL 90

Query: 162 R----AKPFPDPYFKALEMLKVSKDHTFVFEDSVSG-IKAGVAAGLPVVGLTTRN---PE 213
           +     KP    +   L  L++ K    +  ++    I     AG+  + L        +
Sbjct: 91  QPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQD 150

Query: 214 HVLLEANPTFLIKDYDDPKLWSALEELDK 242
             L    P F+I  +D   +  AL  L K
Sbjct: 151 ERLPLVAPPFVIPVWDLADVPEALLLLKK 179

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 2e-05
 Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 50/231 (21%)

Query: 40  HHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF-----------PDDLPRG 88
           HH  F     +  + D + + ED FV+N   K   D+ K +             D +   
Sbjct: 5   HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64

Query: 89  LK----FCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISK 144
           L+        +E M +K   E L+     +   K++             P     + I  
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEEVLRI----N--YKFLMSP---IKTEQRQPSMMTRMYIE- 114

Query: 145 LGLSDFFQVVILGDECERAKPF----PDPYFKALEMLKVSKDHTFVFEDSVSGI-KAGVA 199
                  Q   L ++ +    +      PY K  + L   +    V  D V G  K  VA
Sbjct: 115 -------QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVA 167

Query: 200 AGLPVVGLTTRNPEHVLLEANPTFLIK--DYDDPK-----LWSALEELDKN 243
                      + +         F +   + + P+     L   L ++D N
Sbjct: 168 L------DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253

 Score = 39.0 bits (90), Expect = 6e-04
 Identities = 28/232 (12%), Positives = 64/232 (27%), Gaps = 29/232 (12%)

Query: 20  APLEAVLFDVDGTLCD----SDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNID 75
                 L D++GT+C      + L  Y   ++ Q +  +       +   +         
Sbjct: 29  DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQL 88

Query: 76  IAKILFPDDLPRGLKFCEDKEAMFRKLA--SEQLKPISGLDKVKKWIEDRGLKRAAVTNA 133
            A IL            +  +         S Q+K     D    +I+ R  +    ++ 
Sbjct: 89  QAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYAD-AIDFIK-RKKRVFIYSSG 146

Query: 134 PRENAELMISKLG---------------LSDFFQVVILGDECERAKPFPDPYFKALEMLK 178
             +  +L+   +                +  +F +   G      K     Y   L  + 
Sbjct: 147 SVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG-----KKTETQSYANILRDIG 201

Query: 179 VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD 230
                     D+   + A    G+      +R     + +     + K+++ 
Sbjct: 202 AKASEVLFLSDNPLELDAAAGVGIATGLA-SRPGNAPVPDGQKYQVYKNFET 252

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	246
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	100.0
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	100.0
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	100.0
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	100.0
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	100.0
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	100.0
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	100.0
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	100.0
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	100.0
2hsz_A	243	Novel predicted phosphatase; structural genomics,	100.0
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	100.0
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	100.0
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	100.0
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	100.0
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	100.0
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	100.0
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	100.0
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	100.0
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	100.0
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	100.0
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	100.0
1te2_A	226	Putative phosphatase; structural genomics, phospha	100.0
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	100.0
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	100.0
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	100.0
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	100.0
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	100.0
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	100.0
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	100.0
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	100.0
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	100.0
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	100.0
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	100.0
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	100.0
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.98
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.98
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.97
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.97
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.97
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.97
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.97
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.97
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.97
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.97
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.97
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.97
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.97
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.97
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.97
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.96
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.96
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.96
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.96
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.96
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.96
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.96
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.95
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.95
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.95
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.95
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.95
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.94
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.94
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.94
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.93
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.93
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.92
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.92
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.92
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.92
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.92
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.91
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.91
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.91
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.91
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.9
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.9
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.89
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.89
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.89
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.89
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.89
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.88
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.88
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.88
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.88
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.88
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.87
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.87
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.87
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.87
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.87
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.87
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.87
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.87
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.86
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.86
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.86
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.85
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.85
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.76
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.85
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.85
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.85
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.84
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.83
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.83
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.82
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.82
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.82
3dao_A	283	Putative phosphatse; structural genomics, joint ce	99.8
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.79
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.79
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.79
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.79
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	99.78
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.78
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.78
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	99.77
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	99.74
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.73
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	99.72
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	99.7
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.69
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.69
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	99.65
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	99.64
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	99.61
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	99.61
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.6
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	99.56
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	99.56
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	99.45
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	99.44
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	99.43
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	99.35
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	99.32
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	99.31
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	99.29
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	99.29
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	99.28
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	99.1
4gxt_A	385	A conserved functionally unknown protein; structur	99.09
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	98.98
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	98.97
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	98.95
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	98.9
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.9
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	98.82
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	98.73
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	98.7
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	98.67
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	98.65
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	98.62
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	98.57
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.45
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	98.39
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	98.13
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	98.12
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	98.02
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	98.01
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	97.54
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	97.33
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	96.41
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	96.4
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	96.32
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	95.18
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	94.83
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	93.59
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	92.99
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	91.61
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	91.52
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	90.98
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	90.96
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	89.7
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	89.43
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	89.36
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	88.84
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	88.69
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	87.39
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	87.15
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	86.98
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	86.93
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	86.9
3luf_A	259	Two-component system response regulator/ggdef doma	86.8
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	86.24
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	86.24
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	84.59
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	84.19
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	84.07
3dao_A	283	Putative phosphatse; structural genomics, joint ce	83.8
2nn4_A	72	Hypothetical protein YQGQ; novel fold, PFAM:DUF910	83.77
2q5c_A	196	NTRC family transcriptional regulator; structural	83.0
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	82.06
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	81.87
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	81.46
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	80.98

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=100.00  E-value=2.3e-36  Score=227.01  Aligned_cols=211  Identities=30%  Similarity=0.485  Sum_probs=169.1

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC--CchhhhhhHHHHHHHH
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD--DLPRGLKFCEDKEAMF   99 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   99 (246)
                      ||+|+||+||||+|+...+..++..+++++|    .+.+.+.+ ..+.|.............  .......+.......+
T Consensus         1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYG----KPYTEDLH-RRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEK   75 (216)
T ss_dssp             CCEEEEESBTTTBCCGGGHHHHHHHHHHHTT----CCCCHHHH-HHHTTSCHHHHHHHHHHHTTCCSCHHHHHHHHHHHH
T ss_pred             CeEEEECCCCcccCCHHHHHHHHHHHHHHcC----CCCCHHHH-HHHhccchhhhhhhhhhcccchhhHHHHHHHHHHHH
Confidence            6899999999999999999999999999994    45666554 344566665555444322  2223334444444555


Q ss_pred             HHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          100 RKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       100 ~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      ........+++||+.++|+.|++.|++++++||++...+...++++|+.++||.++++++.+..||+|+.|+.+++++|+
T Consensus        76 ~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~  155 (216)
T 3kbb_A           76 KRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNV  155 (216)
T ss_dssp             HHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTC
T ss_pred             HHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCC
Confidence            55555567899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEecChhhhHHHHhcCCCEEE-EcCCC-ChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          180 SKDHTFVFEDSVSGIKAGVAAGLPVVG-LTTRN-PEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       180 ~~~~~~~igD~~~Di~~a~~~G~~~i~-v~~~~-~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      +|++|+||||+.+|+.+|+++|+++|+ +.++. ....+...+++.++ +..+  ++..|+++
T Consensus       156 ~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~~~e--li~~l~eL  215 (216)
T 3kbb_A          156 VPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-KPEE--ILNVLKEV  215 (216)
T ss_dssp             CGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-CGGG--HHHHHHHH
T ss_pred             CccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-CHHH--HHHHHHHH
Confidence            999999999999999999999999885 77774 44555555555554 5667  66666654

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=100.00  E-value=5e-36  Score=224.35  Aligned_cols=203  Identities=16%  Similarity=0.198  Sum_probs=162.2

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMF   99 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (246)
                      |++|+|+||+||||+|+...+..++..+++++|.    ..........+.|......+..++.  ......+...+...+
T Consensus         2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~   75 (210)
T 2ah5_A            2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGV----PSPDAKTIRGFMGPPLESSFATCLS--KDQISEAVQIYRSYY   75 (210)
T ss_dssp             TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTC----CCCCHHHHHHTSSSCHHHHHHTTSC--GGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCC----CCCCHHHHHHHcCccHHHHHHHHcC--HHHHHHHHHHHHHHH
Confidence            4589999999999999999999999999999954    3322222334456665555554422  222334444444444


Q ss_pred             HHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          100 RKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       100 ~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      .........++||+.++|+.|++ |++++++||++...++..++++|+..+|+.+++++  +..||+|+.|+.+++++|+
T Consensus        76 ~~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~  152 (210)
T 2ah5_A           76 KAKGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQL  152 (210)
T ss_dssp             HHTGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTC
T ss_pred             HHhccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CCCCCChHHHHHHHHHcCC
Confidence            43322346789999999999999 99999999999989999999999999999999887  7899999999999999999


Q ss_pred             CCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC-hhhhhccCCcEEecCCCCh
Q 025896          180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP-EHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       180 ~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~i~~~~el  231 (246)
                      +|++|++|||+.+|+++|+++|+.++++.+++. ..+.....|+++++++.|+
T Consensus       153 ~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el  205 (210)
T 2ah5_A          153 APEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV  205 (210)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred             CcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence            999999999999999999999999999998864 4444445799999999993

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=100.00  E-value=8.3e-36  Score=226.93  Aligned_cols=218  Identities=21%  Similarity=0.260  Sum_probs=182.5

Q ss_pred             cccccCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC--CchhhhhhH
Q 025896           15 ALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD--DLPRGLKFC   92 (246)
Q Consensus        15 ~~~~~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~   92 (246)
                      +.....++|+|+||+||||+++...+..++..+++++|    .......+ ....|......+..+...  .......+.
T Consensus        12 ~~~~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   86 (237)
T 4ex6_A           12 SGAPAAADRGVILDLDGTLADTPAAIATITAEVLAAMG----TAVSRGAI-LSTVGRPLPASLAGLLGVPVEDPRVAEAT   86 (237)
T ss_dssp             -----CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTT----CCCCHHHH-HHHTTSCHHHHHHHHHTSCTTSHHHHHHH
T ss_pred             cCCCcccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcC----CCCCHHHH-HHhcCccHHHHHHHHhCCCCCHHHHHHHH
Confidence            34456789999999999999999999999999999995    23444444 445577777777777655  445555666


Q ss_pred             HHHHHHHHHHhh--ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHH
Q 025896           93 EDKEAMFRKLAS--EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPY  170 (246)
Q Consensus        93 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~  170 (246)
                      ..+...+.....  ....++||+.++|+.|++.|++++++||.....++..++++|+..+|+.+++++..+..||++..|
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~  166 (237)
T 4ex6_A           87 EEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMA  166 (237)
T ss_dssp             HHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHH
T ss_pred             HHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHH
Confidence            666666666655  678899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh-hhhhccCCcEEecCCCChhhHHHHhh
Q 025896          171 FKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      +.+++++|++|++|++|||+.+|+.||+.+|+.++++.+++.. .+.....|+++++++.|  +..++++
T Consensus       167 ~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~e--l~~~l~~  234 (237)
T 4ex6_A          167 LHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPA--AVTAVLD  234 (237)
T ss_dssp             HHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHH--HHHHHHH
T ss_pred             HHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHH--HHHHHHc
Confidence            9999999999999999999999999999999999999999544 55555689999999999  6666654

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=100.00  E-value=6.8e-36  Score=225.78  Aligned_cols=218  Identities=17%  Similarity=0.229  Sum_probs=176.9

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFR  100 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (246)
                      ++|+|+||+||||+++...+..++..+++++|..    ...........|......+...+.............+...+.
T Consensus         3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (226)
T 3mc1_A            3 LYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQ----VEDLSSLNKFVGPPLKTSFMEYYNFDEETATVAIDYYRDYFK   78 (226)
T ss_dssp             CCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCC----CSCGGGGGGGSSSCHHHHHHHHHCCCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCC----CCCHHHHHHHhCcCHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999543    322222344557777776666654444444444444444444


Q ss_pred             HHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCC
Q 025896          101 KLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS  180 (246)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  180 (246)
                      ........++||+.++|+.|++.|++++++|+.....++..++.+|+..+|+.+++++..+..||++..++.+++++|++
T Consensus        79 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~  158 (226)
T 3mc1_A           79 AKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIK  158 (226)
T ss_dssp             TTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCC
T ss_pred             HhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcC
Confidence            43334578999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh-hhhhccCCcEEecCCCChhhHHHHhhhhcCC
Q 025896          181 KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFLIKDYDDPKLWSALEELDKNK  244 (246)
Q Consensus       181 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~i~~~~el~~~~~l~~~~~~~  244 (246)
                      |++|++|||+.||++||+.+|+.++++.+++.. .......|+++++++.|  +..++.+..+++
T Consensus       159 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~e--l~~~~~~~~~~~  221 (226)
T 3mc1_A          159 SDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDE--LHKKILELREGH  221 (226)
T ss_dssp             GGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHH--HHHHHHTC----
T ss_pred             cccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHH--HHHHHHHHhccc
Confidence            999999999999999999999999999988644 44435789999999999  777777766554

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=100.00  E-value=9.1e-35  Score=220.42  Aligned_cols=218  Identities=22%  Similarity=0.261  Sum_probs=178.3

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-----CchhhhhhHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-----DLPRGLKFCE   93 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~   93 (246)
                      ++++|+|+||+||||+++...+..++..+++++|.    ......+... .|......+..+...     .......+..
T Consensus         3 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (233)
T 3s6j_A            3 LRPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENI----PLAMWRIHRK-IGMSGGLMLKSLSRETGMSITDEQAERLSE   77 (233)
T ss_dssp             --CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTC----CCCHHHHHHH-TTSCHHHHHHHHHHC----CCHHHHHHHHH
T ss_pred             CCcCcEEEEcCCCccccChHHHHHHHHHHHHHcCC----CCCHHHHHHH-cCCcHHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence            45689999999999999999999999999999954    4555554443 577766666555443     2334444444


Q ss_pred             HHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHH
Q 025896           94 DKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKA  173 (246)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~  173 (246)
                      .+...+... .....++|++.++|++|++.|++++++|+.....++..++++|+..+|+.+++++..+..||++..|+.+
T Consensus        78 ~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~  156 (233)
T 3s6j_A           78 KHAQAYERL-QHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAA  156 (233)
T ss_dssp             HHHHHHHHT-GGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHH
T ss_pred             HHHHHHHHh-hccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHH
Confidence            444444432 2457899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCC-CChhhhhccCCcEEecCCCChhhHHHHhhhhcCC
Q 025896          174 LEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR-NPEHVLLEANPTFLIKDYDDPKLWSALEELDKNK  244 (246)
Q Consensus       174 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~~~~  244 (246)
                      ++++|++|+++++|||+.+|+.+|+.+|+.++++.++ +...+.....|+++++++.|  +..++++...++
T Consensus       157 ~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~e--l~~~l~~~~~~~  226 (233)
T 3s6j_A          157 AKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLD--LLNHLDEIASRE  226 (233)
T ss_dssp             HHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHH--HHHTGGGTCC--
T ss_pred             HHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHH--HHHHHHHHhhhc
Confidence            9999999999999999999999999999999999988 55555566679999999999  888888776654

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=100.00  E-value=1.1e-34  Score=221.30  Aligned_cols=211  Identities=19%  Similarity=0.278  Sum_probs=165.6

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhC-------------------
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF-------------------   81 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------   81 (246)
                      ++|+|+||+||||+|+...+..++..+++.+|...  ..+...+ ..+.|......+..+.                   
T Consensus         3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (240)
T 2hi0_A            3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRH--DFTVEDI-KNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDE   79 (240)
T ss_dssp             SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCC--CCCHHHH-HHHCSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTC
T ss_pred             cccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCC--CCCHHHH-HHhcCccHHHHHHHHHHhccccccccccccccccc
Confidence            48999999999999999999999999999995420  1334443 3445665555444432                   


Q ss_pred             --CC--CchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEec
Q 025896           82 --PD--DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILG  157 (246)
Q Consensus        82 --~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~  157 (246)
                        ..  .......+...+...+.........++||+.++|+.|+++|++++++||.+...++..++++++. +|+.++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~  158 (240)
T 2hi0_A           80 QIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGE  158 (240)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEE
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEec
Confidence              11  12223333344444444433345678999999999999999999999999988899999999998 99999999


Q ss_pred             CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh-hhhhccCCcEEecCCCChhhHHH
Q 025896          158 DECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFLIKDYDDPKLWSA  236 (246)
Q Consensus       158 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~i~~~~el~~~~~  236 (246)
                      ++...+||+|+.|..+++++|++|++|++|||+.+|+.+|+.+|+.++++.+++.. .+.....++++++++.|  +..+
T Consensus       159 ~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~e--l~~~  236 (240)
T 2hi0_A          159 KSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEK--LEEA  236 (240)
T ss_dssp             CTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHH--HHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHH--HHHH
Confidence            98899999999999999999999999999999999999999999999999988533 44444579999999988  4444


Q ss_pred             H
Q 025896          237 L  237 (246)
Q Consensus       237 l  237 (246)
                      +
T Consensus       237 l  237 (240)
T 2hi0_A          237 I  237 (240)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=100.00  E-value=1.3e-34  Score=221.35  Aligned_cols=213  Identities=22%  Similarity=0.379  Sum_probs=169.2

Q ss_pred             ccCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhC----CC--Cchhhhhh
Q 025896           18 KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF----PD--DLPRGLKF   91 (246)
Q Consensus        18 ~~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~   91 (246)
                      .|+++|+|+||+||||+++...+..++..+++++|    .......... ..|......+..++    ..  ........
T Consensus        20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g----~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (243)
T 3qxg_A           20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHG----LDLSREEAYM-HEGRTGASTINIVFQRELGKEATQEEIESI   94 (243)
T ss_dssp             --CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTT----CCCCHHHHHH-TTTSCHHHHHHHHHHHHHSSCCCHHHHHHH
T ss_pred             ccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhC----CCCCHHHHHH-HhCCCHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence            45679999999999999999999999999999994    4455554433 33555444333332    22  33344444


Q ss_pred             HHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc--eEEEecCCCCCCCCChHH
Q 025896           92 CEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF--QVVILGDECERAKPFPDP  169 (246)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~  169 (246)
                      ...+...+...  ....++|++.++|++|++.|++++++||.....+...++. ++..+|  +.++++++....||++..
T Consensus        95 ~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~  171 (243)
T 3qxg_A           95 YHEKSILFNSY--PEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEP  171 (243)
T ss_dssp             HHHHHHHHHTS--SCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHH
T ss_pred             HHHHHHHHHhc--ccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHH
Confidence            43333333221  3478899999999999999999999999998888888988 999999  889999999999999999


Q ss_pred             HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC-hhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          170 YFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP-EHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      |+.+++++|++|++|++|||+.+|+.||+.+|+.++++.++.. ..+.....|+++++++.|  +..+++++
T Consensus       172 ~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~e--l~~~l~~l  241 (243)
T 3qxg_A          172 YLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQT--LCDSWDTI  241 (243)
T ss_dssp             HHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHH--HHHHHHHH
T ss_pred             HHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHH--HHHHHHhh
Confidence            9999999999999999999999999999999999999998854 444455689999999999  67777665

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=100.00  E-value=1.1e-34  Score=223.84  Aligned_cols=218  Identities=26%  Similarity=0.337  Sum_probs=177.2

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-CchhhhhhHHHHHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-DLPRGLKFCEDKEA   97 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   97 (246)
                      ++++|+|+||+||||+++...+..++..+++++|    .......+...+.|......+..+... ...........+..
T Consensus        25 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (259)
T 4eek_A           25 DAPFDAVLFDLDGVLVESEGIIAQVWQSVLAERG----LHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPDFLDVLET  100 (259)
T ss_dssp             CCCCSEEEEESBTTTEECHHHHHHHHHHHHHHTT----CCCCHHHHHHHTTTCCHHHHHHHHHHHHCCCCCTTHHHHHHH
T ss_pred             hcCCCEEEECCCCCcccCHHHHHHHHHHHHHHhC----CCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            4579999999999999999999999999999994    456666666667788777776665322 11111122222333


Q ss_pred             HHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceE-EEecCCCC-CCCCChHHHHHHHH
Q 025896           98 MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQV-VILGDECE-RAKPFPDPYFKALE  175 (246)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~-~~kp~~~~~~~~~~  175 (246)
                      .+.+.. ....++|++.++|++|++.|++++++||.....++..++++|+..+|+. ++++++.+ ..||++..|+.+++
T Consensus       101 ~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~  179 (259)
T 4eek_A          101 RFNAAM-TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQ  179 (259)
T ss_dssp             HHHHHH-TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHH
T ss_pred             HHHHHh-ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHH
Confidence            333333 5678999999999999999999999999999999999999999999999 99898888 99999999999999


Q ss_pred             HcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCC-C----hhhhhccCCcEEecCCCChhhHHHHhhhhcC
Q 025896          176 MLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRN-P----EHVLLEANPTFLIKDYDDPKLWSALEELDKN  243 (246)
Q Consensus       176 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~-~----~~~~~~~~~~~~i~~~~el~~~~~l~~~~~~  243 (246)
                      ++|++|++|++|||+.+|+.+|+.+|+.++++.++. .    ..+.....|+++++++.|  +..++++....
T Consensus       180 ~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~e--l~~~l~~~~~~  250 (259)
T 4eek_A          180 QLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAE--LRAALAEAGLL  250 (259)
T ss_dssp             HTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHH--HHHHHHHTTSS
T ss_pred             HcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHH--HHHHHHhcccc
Confidence            999999999999999999999999999999998773 2    445556679999999999  77777765543

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=100.00  E-value=1.1e-33  Score=216.26  Aligned_cols=213  Identities=18%  Similarity=0.304  Sum_probs=167.8

Q ss_pred             cccccCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhC--------CC-Cc
Q 025896           15 ALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF--------PD-DL   85 (246)
Q Consensus        15 ~~~~~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~   85 (246)
                      +...+.++|+|+||+||||+++...+..++..+++.+|..   ......+ ..+.|......+...+        .. ..
T Consensus        16 ~~~~~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~---~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   91 (243)
T 2hsz_A           16 YFQGMTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLP---QASENLV-MTWIGNGADVLSQRAVDWACKQAEKELTE   91 (243)
T ss_dssp             ---CCSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCC---CCCHHHH-HHHCSSCHHHHHHHHHHHHHHHHTCCCCH
T ss_pred             eecCCccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCC---CCCHHHH-HHHhCchHHHHHHHHhhhhhccccccCCH
Confidence            3445678999999999999999999999999999999643   1233333 3344555444433322        11 23


Q ss_pred             hhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCC
Q 025896           86 PRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKP  165 (246)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp  165 (246)
                      .........+...+.........++||+.++|+.|++.|++++++||.....++..++++|+..+|+.+++++.....||
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp  171 (243)
T 2hsz_A           92 DEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKP  171 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTT
T ss_pred             HHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCCc
Confidence            33334444444555554445678899999999999999999999999999999999999999999999999998889999


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC-hhhhhccCCcEEecCCCCh
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP-EHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~i~~~~el  231 (246)
                      ++..|..+++++|+++++|++|||+.+|+.+|+.+|+.++++.++.. ..+.....|+++++++.|+
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el  238 (243)
T 2hsz_A          172 HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI  238 (243)
T ss_dssp             SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred             CHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHH
Confidence            99999999999999999999999999999999999999999998854 3344456899999999993

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=100.00  E-value=3e-34  Score=216.46  Aligned_cols=212  Identities=24%  Similarity=0.317  Sum_probs=168.6

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFR  100 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (246)
                      ++|+|+||+||||+++...+..++..+++.+|..   ..+...+ ....|......+..++..  .....+...+...+.
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~---~~~~~~~-~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   75 (222)
T 2nyv_A            2 SLRVILFDLDGTLIDSAKDIALALEKTLKELGLE---EYYPDNV-TKYIGGGVRALLEKVLKD--KFREEYVEVFRKHYL   75 (222)
T ss_dssp             EECEEEECTBTTTEECHHHHHHHHHHHHHHTTCG---GGCCSCG-GGGCSSCHHHHHHHHHGG--GCCTHHHHHHHHHHH
T ss_pred             CCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCC---CCCHHHH-HHHhCcCHHHHHHHHhCh--HHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999643   1222222 223466655555555331  122233344444444


Q ss_pred             HHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCC
Q 025896          101 KLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS  180 (246)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  180 (246)
                      ........++||+.++|+.|++.|++++++||.+...++..++++|+..+|+.++++++.+..||++..+..+++++|++
T Consensus        76 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~  155 (222)
T 2nyv_A           76 ENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEE  155 (222)
T ss_dssp             HCSCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCC
T ss_pred             HhccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCC
Confidence            43334678899999999999999999999999999999999999999999999999998899999999999999999999


Q ss_pred             CCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhhhc
Q 025896          181 KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK  242 (246)
Q Consensus       181 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~~  242 (246)
                      |+++++|||+.+|+.+|+.+|+.++++.+++...+.  ..++++++++.+  +..++.+..+
T Consensus       156 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~--~~~~~~~~~~~e--l~~~l~~~~~  213 (222)
T 2nyv_A          156 PEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS--QIPDFTLSRPSD--LVKLMDNHIV  213 (222)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC--CCCSEEESSTTH--HHHHHHTTSS
T ss_pred             chhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc--cCCCEEECCHHH--HHHHHHHhhh
Confidence            999999999999999999999999999887543332  678999999999  6666666543

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=100.00  E-value=1.3e-34  Score=221.35  Aligned_cols=199  Identities=21%  Similarity=0.347  Sum_probs=154.2

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-------Cchhhhhh
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-------DLPRGLKF   91 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~   91 (246)
                      +|+||+|+||+||||+|+...+..++.++++++|+    +.+.+.. ..+.|.........+...       ........
T Consensus         2 ~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T 4g9b_A            2 VMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGI----SIDAQFN-ESLKGISRDESLRRILQHGGKEGDFNSQERAQL   76 (243)
T ss_dssp             CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTC----CCCTTGG-GGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHH
T ss_pred             CccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCC----CCCHHHH-HHHcCCCHHHHHHHHHHHhhcccchhHHHHHHH
Confidence            46799999999999999999999999999999954    4444433 445577766666555432       11111222


Q ss_pred             HHHHHHHHHHHhh--ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHH
Q 025896           92 CEDKEAMFRKLAS--EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDP  169 (246)
Q Consensus        92 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~  169 (246)
                      .......+.....  ....++||+.++++.|+++|++++++|+..  ..+..++++|+..+|+.++++++.+.+||+|+.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~  154 (243)
T 4g9b_A           77 AYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFTFCADASQLKNSKPDPEI  154 (243)
T ss_dssp             HHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCSEECCGGGCSSCTTSTHH
T ss_pred             HHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhccccccccccccccCCCCcHHH
Confidence            2222222332222  234689999999999999999999999875  356779999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          170 YFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                      |..+++++|++|++|++|||+.+|+.+|+++|+.+|+|.++..       .++.++++..++
T Consensus       155 ~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~-------~ad~~~~~~~~l  209 (243)
T 4g9b_A          155 FLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLT-------GAQLLLPSTESL  209 (243)
T ss_dssp             HHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCC-------SCSEEESSGGGC
T ss_pred             HHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCC-------cHHHhcCChhhc
Confidence            9999999999999999999999999999999999999988742       344555555554

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=100.00  E-value=5.4e-34  Score=218.85  Aligned_cols=206  Identities=21%  Similarity=0.383  Sum_probs=159.4

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCC---C----Cchhhhhh
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFP---D----DLPRGLKF   91 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~   91 (246)
                      ..++|+|+||+||||+|+...+..++.++++++|+    +.+.... ..+.|.........+..   .    .......+
T Consensus        23 ~~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (250)
T 4gib_A           23 NAMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGI----DIDTKFN-ESLKGISRMESLDRILEFGNKKYSFSEEEKVRM   97 (250)
T ss_dssp             -CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTC----CCCTTGG-GGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHH
T ss_pred             cchhheeeecCCCcccCCHHHHHHHHHHHHHHcCC----CCCHHHH-HHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHH
Confidence            35699999999999999999999999999999954    4444332 34456665554444321   1    22333333


Q ss_pred             HHHHHHHHHHHhh--ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHH
Q 025896           92 CEDKEAMFRKLAS--EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDP  169 (246)
Q Consensus        92 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~  169 (246)
                      .......+.....  ....++||+.++++.|++.|++++++|+..  .....++++|+.++|+.++++++.+..||+|+.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~  175 (250)
T 4gib_A           98 AEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCKNNKPHPEI  175 (250)
T ss_dssp             HHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCCSCTTSSHH
T ss_pred             HHHHHHHHHHHHhhccccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccCCCCCcHHH
Confidence            4444444444332  235689999999999999999999877663  456789999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHH
Q 025896          170 YFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSA  236 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~  236 (246)
                      |..+++++|++|++|+||||+.+|+++|+++|+.+|++.+..   +.  ..|+++++++.|+.+-.+
T Consensus       176 ~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~---~~--~~ad~vi~~l~eL~~~~i  237 (250)
T 4gib_A          176 FLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYE---NL--KKANLVVDSTNQLKFEYI  237 (250)
T ss_dssp             HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTT---TT--TTSSEEESSGGGCCHHHH
T ss_pred             HHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChh---Hh--ccCCEEECChHhCCHHHH
Confidence            999999999999999999999999999999999999995432   21  368999999999754333

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=100.00  E-value=1.7e-33  Score=214.65  Aligned_cols=206  Identities=17%  Similarity=0.216  Sum_probs=174.3

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFR  100 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (246)
                      ++|+|+||+||||+++...+..++..+++++|.    ......+ ....|......+...+.............+...+.
T Consensus        28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (240)
T 3sd7_A           28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGI----KEDLENL-DQFIGPPLHDTFKEYYKFEDKKAKEAVEKYREYFA  102 (240)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTC----CCCGGGG-GGGSSSCHHHHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred             hccEEEEecCCcCccCHHHHHHHHHHHHHHcCC----CCCHHHH-HHHhCccHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999954    3333333 34557777777777665445555555555555555


Q ss_pred             HHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCC
Q 025896          101 KLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS  180 (246)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  180 (246)
                      ........++||+.++|++|++.|++++++|+.....++..++.+|+..+|+.+++++..+..||++..++.+++++|++
T Consensus       103 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~  182 (240)
T 3sd7_A          103 DKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVK  182 (240)
T ss_dssp             HTGGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCC
T ss_pred             HhcccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCC
Confidence            54445678999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             -CCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh-hhhhccCCcEEecCCCCh
Q 025896          181 -KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       181 -~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~i~~~~el  231 (246)
                       |+++++|||+.+|+++|+.+|+.++++.+++.. .......|+++++++.|+
T Consensus       183 ~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el  235 (240)
T 3sd7_A          183 DKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESI  235 (240)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTH
T ss_pred             CCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHH
Confidence             999999999999999999999999999988543 444457899999999993

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=100.00  E-value=2.5e-33  Score=217.91  Aligned_cols=217  Identities=20%  Similarity=0.333  Sum_probs=173.7

Q ss_pred             cCCcceEEEeCCCccccChhhH-HHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCC-------------C-
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLH-HYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFP-------------D-   83 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-   83 (246)
                      ++++|+|+||+||||+++.... ..++..+++++|.    ......+ ..+.+......+.....             . 
T Consensus        11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (277)
T 3iru_A           11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGI----EVTQAEA-REPMGTEKSEHIRRMLGNSRIANAWLSIKGQA   85 (277)
T ss_dssp             CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTC----CCCHHHH-HTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSC
T ss_pred             hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCC----CCCHHHH-HHHhcCchHHHHHHhccchHHHHHHHHHhccC
Confidence            4568999999999999988766 7888899999854    4554444 33345544444443332             1 


Q ss_pred             -CchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCc-ceEEEecCCCC
Q 025896           84 -DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF-FQVVILGDECE  161 (246)
Q Consensus        84 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~-f~~~~~~~~~~  161 (246)
                       .......+...+...+.........++||+.++|+.|++.|++++++||.+...++..++.+++..+ |+.+++++..+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  165 (277)
T 3iru_A           86 SNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVV  165 (277)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcC
Confidence             3344445555555555555555678999999999999999999999999999999999999998888 89999999999


Q ss_pred             CCCCChHHHHHHHHHcCCCC-CcEEEEecChhhhHHHHhcCCCEEEEcCCCC------------------------hhhh
Q 025896          162 RAKPFPDPYFKALEMLKVSK-DHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP------------------------EHVL  216 (246)
Q Consensus       162 ~~kp~~~~~~~~~~~~~~~~-~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~------------------------~~~~  216 (246)
                      ..||++..|+.+++++|++| ++|++|||+.||+.+|+.+|+.++++.++..                        ..+.
T Consensus       166 ~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  245 (277)
T 3iru_A          166 RGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRL  245 (277)
T ss_dssp             SCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHH
Confidence            99999999999999999999 9999999999999999999999999999843                        3455


Q ss_pred             hccCCcEEecCCCChhhHHHHhhhhc
Q 025896          217 LEANPTFLIKDYDDPKLWSALEELDK  242 (246)
Q Consensus       217 ~~~~~~~~i~~~~el~~~~~l~~~~~  242 (246)
                      ....|+++++++.|  +..+++++.+
T Consensus       246 ~~~~ad~v~~~~~e--l~~~l~~~~~  269 (277)
T 3iru_A          246 FNAGAHYVIDSVAD--LETVITDVNR  269 (277)
T ss_dssp             HHHTCSEEESSGGG--THHHHHHHHH
T ss_pred             hhCCCCEEecCHHH--HHHHHHHHHH
Confidence            55679999999999  6666666543

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=100.00  E-value=1.1e-33  Score=211.41  Aligned_cols=205  Identities=23%  Similarity=0.297  Sum_probs=162.7

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC--CchhhhhhHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD--DLPRGLKFCEDKEA   97 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   97 (246)
                      +++|+|+||+||||+++...+..++..+++++|.    ......+ ....|......+..+...  .......+...+..
T Consensus         3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (214)
T 3e58_A            3 AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGI----SIDHLPP-SFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNT   77 (214)
T ss_dssp             -CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTC----CCTTSCH-HHHTTSCGGGCHHHHHGGGGGGSCHHHHHHHHHH
T ss_pred             ccccEEEEcCCCCccccHHHHHHHHHHHHHHcCC----CCCHHHH-HHHcCCCHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence            3589999999999999999999999999999954    3444433 234455555444444433  11122333333444


Q ss_pred             HHHHHhh-ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHH
Q 025896           98 MFRKLAS-EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus        98 ~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      .+..... ....++|++.++|++|++.|++++++||.+...++..++++++..+|+.+++++..+..||++..++.++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  157 (214)
T 3e58_A           78 YKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQ  157 (214)
T ss_dssp             HHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHH
T ss_pred             HHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHH
Confidence            3333221 124689999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                      +|++|++|++|||+.+|+.+|+.+|++++++.++.....  ...++++++++.|+
T Consensus       158 ~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~--~~~a~~~~~~~~el  210 (214)
T 3e58_A          158 LNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMD--QSAAKGLLDSLTDV  210 (214)
T ss_dssp             HTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCC--CTTSSEEESSGGGG
T ss_pred             cCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccch--hccHHHHHHHHHHH
Confidence            999999999999999999999999999999987643332  26799999999993

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-33  Score=216.21  Aligned_cols=213  Identities=23%  Similarity=0.387  Sum_probs=169.9

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-C-chhhhhhHHHHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-D-LPRGLKFCEDKE   96 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~   96 (246)
                      ++++|+|+||+||||+++...+..++.++++++|.    ....... ..+.|.........+... . ......+...+.
T Consensus        27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (250)
T 3l5k_A           27 PQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDK----KYSWDVK-SLVMGKKALEAAQIIIDVLQLPMSKEELVEESQ  101 (250)
T ss_dssp             CCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTC----CCCHHHH-HHHTTCCHHHHHHHHHHHHTCSSCHHHHHHHHH
T ss_pred             ccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCC----CCCHHHH-HHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence            35799999999999999999999999999999944    4555544 344567666665555433 1 222233344444


Q ss_pred             HHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHh-cCCCCcceEEEecC--CCCCCCCChHHHHHH
Q 025896           97 AMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISK-LGLSDFFQVVILGD--ECERAKPFPDPYFKA  173 (246)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~--~~~~~kp~~~~~~~~  173 (246)
                      ..+.... ....++||+.++|+.|++.|++++++||.....+...+.+ +++..+|+.+++++  ..+..||++..|+.+
T Consensus       102 ~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~  180 (250)
T 3l5k_A          102 TKLKEVF-PTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLAC  180 (250)
T ss_dssp             HHHHHHG-GGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHH
T ss_pred             HHHHHHh-ccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHH
Confidence            4444443 4688999999999999999999999999998887777755 58888999999998  889999999999999


Q ss_pred             HHHcCCCC--CcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          174 LEMLKVSK--DHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       174 ~~~~~~~~--~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ++++|+++  ++|++|||+.+|+++|+.+|+.++++.+++...+ ....|+++++++.|  +...+..+
T Consensus       181 ~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~-~~~~ad~v~~sl~e--l~~~l~~l  246 (250)
T 3l5k_A          181 AKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRD-LTTKATLVLNSLQD--FQPELFGL  246 (250)
T ss_dssp             HHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGG-GSTTSSEECSCGGG--CCGGGGTC
T ss_pred             HHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchh-hcccccEeecCHHH--hhHHHhcC
Confidence            99999998  9999999999999999999999999999875544 45689999999999  44444443

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=100.00  E-value=2.5e-33  Score=212.65  Aligned_cols=209  Identities=22%  Similarity=0.355  Sum_probs=156.8

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-------CchhhhhhHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-------DLPRGLKFCE   93 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~   93 (246)
                      ++|+|+||+||||+++...+..++..+++++|.    ......+ ..+.|.........+...       .......+..
T Consensus         1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (233)
T 3nas_A            1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDI----PFDRDMN-ERLKGISREESLESILIFGGAETKYTNAEKQELMH   75 (233)
T ss_dssp             -CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTC----CCCHHHH-HHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHH
T ss_pred             CCcEEEECCCCCcCCCHHHHHHHHHHHHHHcCC----CCCHHHH-HHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHH
Confidence            378999999999999999999999999999954    4555544 445577766655555431       3344445555


Q ss_pred             HHHHHHHHHhhcc--CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHH
Q 025896           94 DKEAMFRKLASEQ--LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYF  171 (246)
Q Consensus        94 ~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~  171 (246)
                      .+...+.......  ..++||+.++|+.|++.|++++++||...  ....++++|+..+|+.+++++..+..||++..|+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~  153 (233)
T 3nas_A           76 RKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFL  153 (233)
T ss_dssp             HHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------CCHHH
T ss_pred             HHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHH
Confidence            5555555544332  23899999999999999999999999854  7888999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhhh
Q 025896          172 KALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                      .+++++|++|++|++|||+.||+.||+.+|+.++++++.    +... .|+++++++.|+.+..+++.+.
T Consensus       154 ~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~----~~~~-~ad~v~~s~~el~~~~~~~~~~  218 (233)
T 3nas_A          154 TAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQG----QPML-GADLVVRQTSDLTLELLHEEWE  218 (233)
T ss_dssp             HHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC------------CSEECSSGGGCCHHHHHHHHH
T ss_pred             HHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCc----cccc-cCCEEeCChHhCCHHHHHHHHH
Confidence            999999999999999999999999999999999999543    2222 7999999999988666655544

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=100.00  E-value=2.1e-33  Score=214.81  Aligned_cols=212  Identities=25%  Similarity=0.381  Sum_probs=164.6

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhC----CC--CchhhhhhH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF----PD--DLPRGLKFC   92 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~   92 (246)
                      ++++|+|+||+||||+++...+..++..+++++|.    ......... ..|......+..++    ..  .........
T Consensus        20 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (247)
T 3dv9_A           20 SIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGF----GLSREEAYM-HEGRTGASTINIVSRRERGHDATEEEIKAIY   94 (247)
T ss_dssp             CCCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTC----CCCHHHHHH-TTTSCHHHHHHHHHHHHHSSCCCHHHHHHHH
T ss_pred             CCCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCC----CCCHHHHHH-HhCCChHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence            45789999999999999999999999999999954    455544433 33555444333332    22  333333333


Q ss_pred             HHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc--eEEEecCCCCCCCCChHHH
Q 025896           93 EDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF--QVVILGDECERAKPFPDPY  170 (246)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~~  170 (246)
                      ......+...  ....++||+.++|+.|++.|++++++||.....+...+++ ++..+|  +.+++++..+.+||++..|
T Consensus        95 ~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~  171 (247)
T 3dv9_A           95 QAKTEEFNKC--PKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPY  171 (247)
T ss_dssp             HHHHHHHTTS--CCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHH
T ss_pred             HHHHHHHHhc--ccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHH
Confidence            3333222221  3468899999999999999999999999998888888998 999999  8899999999999999999


Q ss_pred             HHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC-hhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          171 FKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP-EHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      +.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. ........|+++++++.|  +..+++++
T Consensus       172 ~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~e--l~~~l~~~  240 (247)
T 3dv9_A          172 LMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPD--FNKNWETL  240 (247)
T ss_dssp             HHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHH--HHHHHHHH
T ss_pred             HHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHH--HHHHHHHH
Confidence            999999999999999999999999999999999999998854 344455689999999999  55555544

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=100.00  E-value=1.8e-32  Score=206.49  Aligned_cols=216  Identities=20%  Similarity=0.248  Sum_probs=170.3

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-CchhhhhhHHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-DLPRGLKFCEDKEAM   98 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   98 (246)
                      |++|+|+||+||||+++...+..++.++++++|..   ......+ ....|.........+... .......+...+...
T Consensus         4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~---~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (225)
T 3d6j_A            4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYT---GITDDMI-KRTIGKTLEESFSILTGITDADQLESFRQEYSKE   79 (225)
T ss_dssp             -CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCC---CCCHHHH-HTTTTSCHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCC---CCCHHHH-HHHhCCcHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999999999999643   1233333 345577777777666554 333344444445555


Q ss_pred             HHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcC
Q 025896           99 FRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLK  178 (246)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~  178 (246)
                      +.........++|++.++++.|++.|++++++|+......+..++++++..+|+.+++++..+..||++..+..+++++|
T Consensus        80 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~  159 (225)
T 3d6j_A           80 ADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLK  159 (225)
T ss_dssp             HHHHTGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTT
T ss_pred             HHHhccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhC
Confidence            55554456778999999999999999999999999999999999999999999999998888889999999999999999


Q ss_pred             CCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC-hhhhhccCCcEEecCCCChhhHHHHhhhh
Q 025896          179 VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP-EHVLLEANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       179 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                      ++++++++|||+.||++|++.+|++++++.++.+ ..+.....|+++++++.|  +..+++.+.
T Consensus       160 ~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~e--l~~~l~~~~  221 (225)
T 3d6j_A          160 ACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQ--LISVPEDKS  221 (225)
T ss_dssp             CCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGG--GC-------
T ss_pred             CChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHH--HHHhhhhhc
Confidence            9999999999999999999999999999998844 344444459999999999  666666544

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=100.00  E-value=7.5e-33  Score=206.77  Aligned_cols=202  Identities=21%  Similarity=0.203  Sum_probs=161.5

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFR  100 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (246)
                      ++|+|+||+||||+++...+..++.++++++|.    ......+.. ..|......+..+. ............+...+.
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   76 (209)
T 2hdo_A            3 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGK----PFSPAQAQK-TFPMAAEQAMTELG-IAASEFDHFQAQYEDVMA   76 (209)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTC----CCCHHHHHH-HTTSCHHHHHHHTT-CCGGGHHHHHHHHHHHHT
T ss_pred             cccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCC----CCCHHHHHH-HcCCcHHHHHHHcC-CCHHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999853    455555433 44776666666552 222222222222222111


Q ss_pred             HHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCC
Q 025896          101 KLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS  180 (246)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  180 (246)
                      . ......++||+.++|+.|+++ ++++++||.+...++..++++|+..+|+.++++++.+..||++..++.+++++|++
T Consensus        77 ~-~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~  154 (209)
T 2hdo_A           77 S-HYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVA  154 (209)
T ss_dssp             T-CGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCC
T ss_pred             h-hcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence            1 124577899999999999999 99999999999999999999999999999999998899999999999999999999


Q ss_pred             CCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          181 KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       181 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                      |+++++|||+.+|+.+|+.+|+.++++++++...+.... |+++++++.|+
T Consensus       155 ~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el  204 (209)
T 2hdo_A          155 PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDI  204 (209)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGG
T ss_pred             cccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHH
Confidence            999999999999999999999999999987643333333 99999999993

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=100.00  E-value=1.7e-32  Score=206.82  Aligned_cols=208  Identities=20%  Similarity=0.269  Sum_probs=164.5

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCC---CCchhhhhhHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFP---DDLPRGLKFCEDKEA   97 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~   97 (246)
                      ++|+|+||+||||+++...+..++..+++++|..    ...........|.........+..   ........+...+..
T Consensus         8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (226)
T 1te2_A            8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVD----ISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIA   83 (226)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCC----GGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCC----CChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHHHH
Confidence            4899999999999999999999999999999543    321111223345555444443321   111122333333444


Q ss_pred             HHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHc
Q 025896           98 MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEML  177 (246)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~  177 (246)
                      .+.+.......++|++.++|+.|++.|++++++|+......+..++.+++..+|+.+++++..+..||++..++.+++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~  163 (226)
T 1te2_A           84 RAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKL  163 (226)
T ss_dssp             HHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHH
T ss_pred             HHHHHHhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHc
Confidence            44444444578899999999999999999999999999889999999999999999999998899999999999999999


Q ss_pred             CCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChh
Q 025896          178 KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPK  232 (246)
Q Consensus       178 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~  232 (246)
                      |++++++++|||+.||++|++.+|++++++.++.+..+.....|+++++++.|+.
T Consensus       164 ~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~  218 (226)
T 1te2_A          164 GVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT  218 (226)
T ss_dssp             TSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred             CCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHh
Confidence            9999999999999999999999999999999986555555678999999999943

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=100.00  E-value=2.2e-32  Score=208.71  Aligned_cols=214  Identities=21%  Similarity=0.276  Sum_probs=160.1

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHh-cCC--------C-HHHHHHHhCCCCchhhhhh
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENI-AGK--------H-NIDIAKILFPDDLPRGLKF   91 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~-~~~~~~~~~~~~~~~~~~~   91 (246)
                      +|+|+||+||||+++...+..++..++++++.. +...........+ .+.        . .......+......   ..
T Consensus         2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~   77 (241)
T 2hoq_A            2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRH-GLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNP---KW   77 (241)
T ss_dssp             CCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHT-TCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCH---HH
T ss_pred             ccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHc-cccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccc---hH
Confidence            789999999999999999988999998887432 2233332222211 110        0 11112211011111   11


Q ss_pred             HHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHH
Q 025896           92 CEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYF  171 (246)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~  171 (246)
                      ...+...+.........++||+.++|+.|++.|++++++||.....++..++++|+..+|+.+++++..+..||+|..|+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~  157 (241)
T 2hoq_A           78 ISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFK  157 (241)
T ss_dssp             HHHHHHHHHHHHHHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHH
Confidence            12333344443334577899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChhhhh--ccCCcEEecCCCChhhHHHHhhhh
Q 025896          172 KALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVLL--EANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~--~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                      .+++++|++|++|++|||+. ||+.+|+.+|+.++++.++.......  ...|+++++++.|  +..++.+..
T Consensus       158 ~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~e--l~~~l~~~~  228 (241)
T 2hoq_A          158 KALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLES--LLEVLARES  228 (241)
T ss_dssp             HHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTH--HHHHHHHCC
T ss_pred             HHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHH--HHHHHHHHh
Confidence            99999999999999999998 99999999999999997775332222  2368999999999  666676654

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=100.00  E-value=5.6e-32  Score=205.82  Aligned_cols=204  Identities=15%  Similarity=0.227  Sum_probs=160.1

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCC---chHHHHHHhcCC-------------CHHHH----HHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPI---TEDFFVENIAGK-------------HNIDI----AKI   79 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------------~~~~~----~~~   79 (246)
                      |++|+|+||+||||+++...+..++..+++++|.    ..   +...+...+.+.             .....    +..
T Consensus         3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (240)
T 3qnm_A            3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSF----DRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFY   78 (240)
T ss_dssp             CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTG----GGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred             CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCC----CcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999954    33   333333322211             11111    111


Q ss_pred             hCCC-CchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecC
Q 025896           80 LFPD-DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGD  158 (246)
Q Consensus        80 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~  158 (246)
                      ++.. ... .......+...+.........++|++.++|++|+ .|++++++||.+...++..++.+|+..+|+.+++++
T Consensus        79 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~  156 (240)
T 3qnm_A           79 PLQAVGVE-DEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSE  156 (240)
T ss_dssp             HHHHTTCC-CHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGG
T ss_pred             HHHHcCCC-cHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEec
Confidence            1111 111 2233344445555555556889999999999999 899999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          159 ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       159 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                      ..+..||++..|+.+++++|++|++|++|||++ +|+++|+.+|+++++++++..  ......|+++++++.|+
T Consensus       157 ~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~--~~~~~~~d~vi~sl~e~  228 (240)
T 3qnm_A          157 DLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER--TVFPFQPTYHIHSLKEL  228 (240)
T ss_dssp             GTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC--CCCSSCCSEEESSTHHH
T ss_pred             cCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC--CCcCCCCceEECCHHHH
Confidence            999999999999999999999999999999996 999999999999999988865  23446899999999993

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=100.00  E-value=3e-32  Score=206.71  Aligned_cols=216  Identities=19%  Similarity=0.235  Sum_probs=165.8

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHH-hcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-Cc------hhhhhhH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQE-IGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-DL------PRGLKFC   92 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~   92 (246)
                      ++|+|+||+||||+++...+..++.+++++ +|..    .. . ......|+.....+..++.. ..      .....+.
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~----~~-~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (234)
T 2hcf_A            3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTE----GS-T-GSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAK   76 (234)
T ss_dssp             CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCC----CC-C----CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred             cceEEEEcCCCCcccCccchHHHHHHHHHHHhCCC----Cc-c-chhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHH
Confidence            479999999999999999999999999988 6553    22 1 22345677766645544433 11      1233344


Q ss_pred             HHHHHHHHHHhh-ccCCCcccHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCC-CCCCChHH
Q 025896           93 EDKEAMFRKLAS-EQLKPISGLDKVKKWIEDR-GLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECE-RAKPFPDP  169 (246)
Q Consensus        93 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~-g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-~~kp~~~~  169 (246)
                      ..+...+..... ....++||+.++|+.|++. |++++++||......+..++.+|+..+|+.++++++.. ..||.+..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~  156 (234)
T 2hcf_A           77 ETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIA  156 (234)
T ss_dssp             HHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHH
T ss_pred             HHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHH
Confidence            444444443332 4567899999999999999 99999999999999999999999999999877776653 45678899


Q ss_pred             HHHHHHHcC--CCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChh-hhhccCCcEEecCCCChhhHHHHhhhhcCC
Q 025896          170 YFKALEMLK--VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEH-VLLEANPTFLIKDYDDPKLWSALEELDKNK  244 (246)
Q Consensus       170 ~~~~~~~~~--~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~-~~~~~~~~~~i~~~~el~~~~~l~~~~~~~  244 (246)
                      ++.+++++|  ++|++|++|||+.||+.+|+.+|+.++++.+++... ......|+++++++.|  +..+++++.+.+
T Consensus       157 ~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~e--l~~~l~~~~~~~  232 (234)
T 2hcf_A          157 LERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAE--TDEVLASILTPK  232 (234)
T ss_dssp             HHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCC--HHHHHHHHHC--
T ss_pred             HHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHh--HHHHHHHHhccC
Confidence            999999999  999999999999999999999999999999885433 3333469999999999  777777776543

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.8e-32  Score=210.50  Aligned_cols=225  Identities=18%  Similarity=0.157  Sum_probs=155.4

Q ss_pred             CCCCCcccccccccccCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC
Q 025896            4 STGENSVESKDALAKLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD   83 (246)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (246)
                      +.+.+...+.++....|++|+|+||+||||+++...+..++..+++++|.    ..........+.+.............
T Consensus         4 ~~~~~~~~~~~~~~~~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (254)
T 3umc_A            4 SHHHHHHSSGRENLYFQGMRAILFDVFGTLVDWRSSLIEQFQALERELGG----TLPCVELTDRWRQQYKPAMDRVRNGQ   79 (254)
T ss_dssp             -------------CCSSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSS----CCCHHHHHHHHHHHTHHHHHHHHTTS
T ss_pred             cccccccccCCCcccccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhccc
Confidence            33344323334444567899999999999999999999999999999954    44444433333222222111111111


Q ss_pred             -CchhhhhhHHH-HHHHH--------------HHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCC
Q 025896           84 -DLPRGLKFCED-KEAMF--------------RKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGL  147 (246)
Q Consensus        84 -~~~~~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l  147 (246)
                       ........... .....              .........++|++.++|+.|++. ++++++||.+...+...++.+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~  158 (254)
T 3umc_A           80 APWQHLDQLHRQSLEALAGEFGLALDEALLQRITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGL  158 (254)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTC
T ss_pred             CCcccHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCC
Confidence             11111111110 00000              011123467899999999999986 99999999999999999999998


Q ss_pred             CCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcC----CCCh-hhh-hccCC
Q 025896          148 SDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTT----RNPE-HVL-LEANP  221 (246)
Q Consensus       148 ~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~----~~~~-~~~-~~~~~  221 (246)
                      .  |+.+++++..+..||++..|+.+++++|++|++|++|||+.||++||+.+|+.++++++    +... .+. ....|
T Consensus       159 ~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~a  236 (254)
T 3umc_A          159 P--WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDW  236 (254)
T ss_dssp             C--CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCC
T ss_pred             C--cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCC
Confidence            6  99999998889999999999999999999999999999999999999999999999984    4322 222 25689


Q ss_pred             cEEecCCCChhhHHHH
Q 025896          222 TFLIKDYDDPKLWSAL  237 (246)
Q Consensus       222 ~~~i~~~~el~~~~~l  237 (246)
                      +++++++.|  +..+|
T Consensus       237 d~v~~~l~e--l~~~l  250 (254)
T 3umc_A          237 DLIASDLLD--LHRQL  250 (254)
T ss_dssp             SEEESSHHH--HHHHH
T ss_pred             cEEECCHHH--HHHHh
Confidence            999999999  55554

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=100.00  E-value=5.4e-32  Score=208.79  Aligned_cols=223  Identities=16%  Similarity=0.279  Sum_probs=159.0

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHH----HHhcC-------CCHHHHHH----HhCCC
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFV----ENIAG-------KHNIDIAK----ILFPD   83 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~----~~~~~   83 (246)
                      ..++|+|+||+||||+|+...+..++..+++.++...|.........    ....+       ........    ..+..
T Consensus        15 ~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (260)
T 2gfh_A           15 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQE   94 (260)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHHH
T ss_pred             cccceEEEEcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHH
Confidence            46789999999999999999888888888875421112222211111    11111       11111110    01000


Q ss_pred             --CchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCC
Q 025896           84 --DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECE  161 (246)
Q Consensus        84 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~  161 (246)
                        ...............+.........++||+.++|+.|++ +++++|+||.+...++..++++|+..+|+.++++++.+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~  173 (260)
T 2gfh_A           95 TKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK  173 (260)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS
T ss_pred             hcCccchHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCC
Confidence              000011111222222332223457899999999999998 59999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecC-hhhhHHHHhcCC-CEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhh
Q 025896          162 RAKPFPDPYFKALEMLKVSKDHTFVFEDS-VSGIKAGVAAGL-PVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       162 ~~kp~~~~~~~~~~~~~~~~~~~~~igD~-~~Di~~a~~~G~-~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      ..||+|+.|..+++++|++|++|++|||+ .+|+.+|+++|+ .++++.++..........|+++++++.|  +..++.+
T Consensus       174 ~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~e--l~~~l~~  251 (260)
T 2gfh_A          174 EEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLE--LPALLQS  251 (260)
T ss_dssp             SCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGG--HHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHH--HHHHHHH
Confidence            99999999999999999999999999996 899999999999 7999977643333344679999999999  6677777


Q ss_pred             hhcCC
Q 025896          240 LDKNK  244 (246)
Q Consensus       240 ~~~~~  244 (246)
                      +...|
T Consensus       252 ~~~~~  256 (260)
T 2gfh_A          252 IDCKV  256 (260)
T ss_dssp             HTTCC
T ss_pred             HhhCC
Confidence            66544

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=100.00  E-value=1.1e-31  Score=204.07  Aligned_cols=212  Identities=22%  Similarity=0.330  Sum_probs=161.7

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHh-----------cCC-CHHHHH----HHhCC
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENI-----------AGK-HNIDIA----KILFP   82 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~----~~~~~   82 (246)
                      |+++|+|+||+||||+++...+..++..+++++|.    ...........           .+. ......    ..+..
T Consensus         4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (238)
T 3ed5_A            4 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNI----PLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLK   79 (238)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred             cccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCC----CcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999954    34332221110           011 000100    00100


Q ss_pred             CCchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCC
Q 025896           83 DDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECER  162 (246)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~  162 (246)
                      ..  ............+.........++||+.++|+.|++. ++++++||.....++..++++|+..+|+.+++++..+.
T Consensus        80 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~  156 (238)
T 3ed5_A           80 EY--GYEADGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGF  156 (238)
T ss_dssp             HT--TCCCCHHHHHHHHHHHHTTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTS
T ss_pred             Hc--CCCCcHHHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCC
Confidence            00  0000012333445554445678999999999999999 99999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHcC-CCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          163 AKPFPDPYFKALEMLK-VSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~-~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      .||++..|+.+++++| ++|+++++|||+. +|+.+|+.+|+.++++.+++... .....|+++++++.|  +..++++.
T Consensus       157 ~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~-~~~~~ad~v~~~~~e--l~~~l~~~  233 (238)
T 3ed5_A          157 QKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPN-VPEIIPTYEIRKLEE--LYHILNIE  233 (238)
T ss_dssp             CTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCC-TTCCCCSEEESSGGG--HHHHHTCC
T ss_pred             CCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCC-cccCCCCeEECCHHH--HHHHHHhh
Confidence            9999999999999999 9999999999998 99999999999999998875333 345689999999999  67776653

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=100.00  E-value=1.1e-32  Score=208.94  Aligned_cols=205  Identities=20%  Similarity=0.281  Sum_probs=160.3

Q ss_pred             ccCCcceEEEeCCCccccChhhHHHHH-HHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHH
Q 025896           18 KLAPLEAVLFDVDGTLCDSDPLHHYAF-REMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKE   96 (246)
Q Consensus        18 ~~~~~k~iifD~DGTL~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (246)
                      .|+++|+|+||+||||+++...+..++ .++++++|.. +...      ....+......+..+...   ........+.
T Consensus        21 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~-~~~~------~~~~g~~~~~~~~~~~~~---~~~~~~~~~~   90 (231)
T 3kzx_A           21 SMKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYK-NIDL------DSIPNSTIPKYLITLLGK---RWKEATILYE   90 (231)
T ss_dssp             CCCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCC-CCCC------TTSCTTTHHHHHHHHHGG---GHHHHHHHHH
T ss_pred             ccCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCC-HHHH------HHHhCccHHHHHHHHhCc---hHHHHHHHHH
Confidence            456799999999999999998888888 9999999654 2111      223345555544444332   1122222233


Q ss_pred             HHHH-HHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHH
Q 025896           97 AMFR-KLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALE  175 (246)
Q Consensus        97 ~~~~-~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~  175 (246)
                      ..+. ........++|++.++|+.|++.|++++++||.+...++..++.+|+..+|+.++++++.+..||++..|+.+++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~  170 (231)
T 3kzx_A           91 NSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALT  170 (231)
T ss_dssp             HHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHH
T ss_pred             HHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHH
Confidence            3333 222345778999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCC-cEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          176 MLKVSKD-HTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       176 ~~~~~~~-~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ++|++|+ ++++|||+.+|+++|+.+|+.++++.++..      ..++++++++.|  +..+++++
T Consensus       171 ~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~------~~~~~~~~~~~e--l~~~l~~~  228 (231)
T 3kzx_A          171 NINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI------IKDILSFKNFYD--IRNFICQL  228 (231)
T ss_dssp             HHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC-----------CCEEESSHHH--HHHHHHHH
T ss_pred             HcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC------CCCceeeCCHHH--HHHHHHHH
Confidence            9999999 999999999999999999999999954432      367899999999  66766654

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=100.00  E-value=3.4e-32  Score=210.33  Aligned_cols=215  Identities=16%  Similarity=0.210  Sum_probs=163.3

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHh-----------------cCCCHHHHHHHhCCC-
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENI-----------------AGKHNIDIAKILFPD-   83 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~-   83 (246)
                      +|+|+||+||||+++...+..++..+++.+|.    ......+...+                 .|......+..++.. 
T Consensus         1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   76 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGL----EVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQT   76 (263)
T ss_dssp             CCEEEECCBTTTEEESSCHHHHHHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHH
T ss_pred             CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCC----CCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHH
Confidence            58999999999999998888999999999954    45544332222                 233333322222111 


Q ss_pred             ----CchhhhhhHHHHHHHHHHHhh-ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecC
Q 025896           84 ----DLPRGLKFCEDKEAMFRKLAS-EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGD  158 (246)
Q Consensus        84 ----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~  158 (246)
                          .......+.......+..... ....++||+.++|+.|++.|++++|+||.... +...++.+|+..+|+.+++++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~  155 (263)
T 3k1z_A           77 FHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSE  155 (263)
T ss_dssp             HHHTTCCCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHH
T ss_pred             HHHcCCCCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeec
Confidence                111112222223333333322 23578999999999999999999999998764 688999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChh--hhhccCCcEEecCCCChhhHH
Q 025896          159 ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEH--VLLEANPTFLIKDYDDPKLWS  235 (246)
Q Consensus       159 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~--~~~~~~~~~~i~~~~el~~~~  235 (246)
                      +.+..||+|..|+.+++++|++|++|++|||+. +|+.+|+.+|+.++++.++....  .+....|+++++++.|  +..
T Consensus       156 ~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~e--l~~  233 (263)
T 3k1z_A          156 AAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAH--LLP  233 (263)
T ss_dssp             HHSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGG--HHH
T ss_pred             ccCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHH--HHH
Confidence            999999999999999999999999999999997 99999999999999999885332  3345689999999999  777


Q ss_pred             HHhhhhcC
Q 025896          236 ALEELDKN  243 (246)
Q Consensus       236 ~l~~~~~~  243 (246)
                      +++++.+.
T Consensus       234 ~l~~~~~~  241 (263)
T 3k1z_A          234 ALDCLEGS  241 (263)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhc
Confidence            77776654

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=100.00  E-value=1.2e-31  Score=207.57  Aligned_cols=216  Identities=25%  Similarity=0.368  Sum_probs=166.4

Q ss_pred             CCcceEEEeCCCccccChh-hHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHh-------------CCC--
Q 025896           20 APLEAVLFDVDGTLCDSDP-LHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL-------------FPD--   83 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~--   83 (246)
                      +++|+|+||+||||+++.. .+..++..+++++|.    ......+. ...|.........+             +..  
T Consensus         4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~----~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (267)
T 1swv_A            4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGV----AITAEEAR-KPMGLLKIDHVRALTEMPRIASEWNRVFRQLP   78 (267)
T ss_dssp             -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTC----CCCHHHHH-TTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCC
T ss_pred             CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCC----CCCHHHHH-HHhccchHHHHHHhcccHHHHHHHHHHhCCCC
Confidence            4589999999999999988 678889999999854    34444332 33455443333222             111  


Q ss_pred             CchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc-eEEEecCCCCC
Q 025896           84 DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECER  162 (246)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~  162 (246)
                      .......+...+...+.........++|++.++|+.|++.|++++++|+.....+...++.+++..+| +.+++++....
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  158 (267)
T 1swv_A           79 TEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA  158 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSC
T ss_pred             CHHHHHHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCC
Confidence            22233333444444444444456788999999999999999999999999988889899988888775 88888888889


Q ss_pred             CCCChHHHHHHHHHcCCCC-CcEEEEecChhhhHHHHhcCCCEEEEcCCCC------------------------hhhhh
Q 025896          163 AKPFPDPYFKALEMLKVSK-DHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP------------------------EHVLL  217 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~~~-~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~------------------------~~~~~  217 (246)
                      .||++..+..+++++|+++ ++|++|||+.||++||+.+|++++++.+++.                        ..+..
T Consensus       159 ~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T 1swv_A          159 GRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFV  238 (267)
T ss_dssp             CTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHH
Confidence            9999999999999999999 9999999999999999999999999999865                        23344


Q ss_pred             ccCCcEEecCCCChhhHHHHhhhhc
Q 025896          218 EANPTFLIKDYDDPKLWSALEELDK  242 (246)
Q Consensus       218 ~~~~~~~i~~~~el~~~~~l~~~~~  242 (246)
                      ...|+++++++.|  +..++..+.+
T Consensus       239 ~~~ad~v~~~~~e--l~~~l~~~~~  261 (267)
T 1swv_A          239 ENGAHFTIETMQE--LESVMEHIEK  261 (267)
T ss_dssp             HTTCSEEESSGGG--HHHHHHHHTC
T ss_pred             hcCCceeccCHHH--HHHHHHHHhh
Confidence            5679999999999  6666666544

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=100.00  E-value=5.7e-32  Score=204.54  Aligned_cols=213  Identities=25%  Similarity=0.418  Sum_probs=164.8

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-CchhhhhhHHHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-DLPRGLKFCEDKEAMF   99 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   99 (246)
                      ++|+|+||+||||+++...+..++.++++++|.    ..........+.|......+..+... ...............+
T Consensus         3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (229)
T 2fdr_A            3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGY----PISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKLL   78 (229)
T ss_dssp             CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTC----CCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHHHHHH
T ss_pred             CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCC----CCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence            579999999999999999999999999999954    45534444555677666555554322 1100111222233333


Q ss_pred             HHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc-eEEEecCCCCCC--CCChHHHHHHHHH
Q 025896          100 RKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERA--KPFPDPYFKALEM  176 (246)
Q Consensus       100 ~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~~--kp~~~~~~~~~~~  176 (246)
                      .........++|++.++|+.|+.   +++++|+.....++..++++++..+| +.+++++..+..  ||++..++.++++
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~  155 (229)
T 2fdr_A           79 DMRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQ  155 (229)
T ss_dssp             HHHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHH
T ss_pred             HHHhhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHH
Confidence            33333457889999999998874   89999999999999999999999999 999988888888  9999999999999


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh-----hhhhccCCcEEecCCCChhhHHHHhhhhc
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE-----HVLLEANPTFLIKDYDDPKLWSALEELDK  242 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-----~~~~~~~~~~~i~~~~el~~~~~l~~~~~  242 (246)
                      +|++|+++++|||+.||++||+.+|+.++++.++...     .+....+|+++++++.|  +..+++++..
T Consensus       156 l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~e--l~~~l~~~~~  224 (229)
T 2fdr_A          156 FGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQD--LPAVIAAMAE  224 (229)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGG--HHHHHHHHTC
T ss_pred             cCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHH--HHHHHHHhhh
Confidence            9999999999999999999999999999999887542     23444459999999999  6677776644

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=100.00  E-value=1.6e-31  Score=200.98  Aligned_cols=209  Identities=22%  Similarity=0.342  Sum_probs=163.7

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-----CchhhhhhHHHHH
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-----DLPRGLKFCEDKE   96 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~   96 (246)
                      +|+|+||+||||+++...+..++..+++++|..   ...... .....|.........+...     .......+...+.
T Consensus         2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~---~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (221)
T 2wf7_A            2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGIN---GVDRQF-NEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKN   77 (221)
T ss_dssp             CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCC---CCSHHH-HTTTTTCCHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             CcEEEECCCCcccCChHHHHHHHHHHHHHcCCC---CCCHHH-HHHhCCCCHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Confidence            789999999999999998999999999999542   133333 2345676665544443221     2333344444444


Q ss_pred             HHHHHHhhc--cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHH
Q 025896           97 AMFRKLASE--QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKAL  174 (246)
Q Consensus        97 ~~~~~~~~~--~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~  174 (246)
                      ..+......  ...++|++.++|+.|++.|++++++|+.  ......++++++..+|+.+++++..+..||+|..++.++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~  155 (221)
T 2wf7_A           78 DNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAA  155 (221)
T ss_dssp             HHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHH
T ss_pred             HHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHH
Confidence            444444332  4578999999999999999999999998  456778889999999999999999999999999999999


Q ss_pred             HHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhhh
Q 025896          175 EMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       175 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                      +++|++|++|++|||+.||++||+.+|+.+++++.    .+... .|+++++++.|+.+..+++.+.
T Consensus       156 ~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~----~~~~~-~a~~v~~~~~el~~~~~~~~~~  217 (221)
T 2wf7_A          156 HAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR----PEDLG-DDIVIVPDTSHYTLEFLKEVWL  217 (221)
T ss_dssp             HHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESC----HHHHC-SSSEEESSGGGCCHHHHHHHHH
T ss_pred             HHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECC----HHHhc-cccchhcCHHhCCHHHHHHHHh
Confidence            99999999999999999999999999999999932    23333 7999999999988777776554

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.2e-31  Score=203.42  Aligned_cols=209  Identities=18%  Similarity=0.221  Sum_probs=157.6

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHH---HHHH--------h-cCCCHH---HHHHHhCCC--
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDF---FVEN--------I-AGKHNI---DIAKILFPD--   83 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------~-~~~~~~---~~~~~~~~~--   83 (246)
                      ++|+|+||+||||+++...+..++..+++++|..    .....   +...        . .|+...   .....+...  
T Consensus         3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   78 (235)
T 2om6_A            3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLH----IKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLK   78 (235)
T ss_dssp             CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHT
T ss_pred             CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCC----CcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhC
Confidence            3799999999999999998899999999999542    22221   1110        0 133332   222222111  


Q ss_pred             -CchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHhcCCCCcceEEEecCC
Q 025896           84 -DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAP---RENAELMISKLGLSDFFQVVILGDE  159 (246)
Q Consensus        84 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~~~  159 (246)
                       .......    ....+..... ...++|++.++|+.|++.|++++++||..   ...++..++.+++..+|+.++++++
T Consensus        79 ~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~  153 (235)
T 2om6_A           79 VDVELVKR----ATARAILNVD-ESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADE  153 (235)
T ss_dssp             CCHHHHHH----HHHHHHHHCC-GGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHH
T ss_pred             CCHHHHHH----HHHHHHHhcc-ccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccc
Confidence             1111111    1122222222 22469999999999999999999999999   8888999999999999999999988


Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHh
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~  238 (246)
                      .+..||++..|..+++++|++|++|++|||+. ||++||+.+|++++++.+++...+. ...++++++++.|  +..+++
T Consensus       154 ~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~-~~~~~~~~~~~~e--l~~~l~  230 (235)
T 2om6_A          154 VLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRK-LEERGFEIPSIAN--LKDVIE  230 (235)
T ss_dssp             HTCCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEE-EETTEEEESSGGG--HHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCccc-CCCCcchHhhHHH--HHHHHH
Confidence            88999999999999999999999999999999 9999999999999999988543333 3468899999999  677776


Q ss_pred             hhh
Q 025896          239 ELD  241 (246)
Q Consensus       239 ~~~  241 (246)
                      ++.
T Consensus       231 ~~~  233 (235)
T 2om6_A          231 LIS  233 (235)
T ss_dssp             HTC
T ss_pred             HHh
Confidence            654

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.98  E-value=1.9e-31  Score=204.60  Aligned_cols=214  Identities=16%  Similarity=0.137  Sum_probs=158.1

Q ss_pred             ccCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC--CchhhhhhHH--
Q 025896           18 KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD--DLPRGLKFCE--   93 (246)
Q Consensus        18 ~~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--   93 (246)
                      .++++|+|+||+||||+++...+..++..+++++|.    ..........+.+... .....+...  ..........  
T Consensus        11 ~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   85 (254)
T 3umg_A           11 TGRNVRAVLFDTFGTVVDWRTGIATAVADYAARHQL----EVDAVAFADRWRARYQ-PSMDAILSGAREFVTLDILHREN   85 (254)
T ss_dssp             TCSBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTC----CCCHHHHHHHHHTTHH-HHHHHHHTTSSCCCCHHHHHHHH
T ss_pred             CCCCceEEEEeCCCceecCchHHHHHHHHHHHHhcC----CCCHHHHHHHHHHhHH-HHHHHHHhcCCCCCCHHHHHHHH
Confidence            346799999999999999999999999999999954    4555444444444221 111111111  1000011110  


Q ss_pred             -----------------HHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEe
Q 025896           94 -----------------DKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVIL  156 (246)
Q Consensus        94 -----------------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~  156 (246)
                                       .....+.. ......++|++.++|+.|++. ++++++||.+....+..++.+|+.  |+.+++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~  161 (254)
T 3umg_A           86 LDFVLRESGIDPTNHDSGELDELAR-AWHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDVIIG  161 (254)
T ss_dssp             HHHHHHHTTCCGGGSCHHHHHHHHG-GGGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSCCCC
T ss_pred             HHHHHHHhCCCcCcCCHHHHHHHHH-HHhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeEEEE
Confidence                             01111111 113567899999999999997 999999999999999999999986  898888


Q ss_pred             cCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcC----CCC-hhhh-hccCCcEEecCCCC
Q 025896          157 GDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTT----RNP-EHVL-LEANPTFLIKDYDD  230 (246)
Q Consensus       157 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~----~~~-~~~~-~~~~~~~~i~~~~e  230 (246)
                      ++..+..||++..|+.+++++|++|++|++|||+.||+.+|+.+|+.++++++    +.. ..+. ....|+++++++.|
T Consensus       162 ~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~e  241 (254)
T 3umg_A          162 SDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITD  241 (254)
T ss_dssp             HHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHH
T ss_pred             cCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHH
Confidence            88889999999999999999999999999999999999999999999999984    322 2222 35689999999999


Q ss_pred             hhhHHHHhhhhc
Q 025896          231 PKLWSALEELDK  242 (246)
Q Consensus       231 l~~~~~l~~~~~  242 (246)
                        +..++....+
T Consensus       242 --l~~~l~~~~~  251 (254)
T 3umg_A          242 --LAAQLRAGST  251 (254)
T ss_dssp             --HHHHHHHCC-
T ss_pred             --HHHHhcCCCC
Confidence              6777765433

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.98  E-value=4.8e-31  Score=195.98  Aligned_cols=200  Identities=17%  Similarity=0.245  Sum_probs=158.5

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcC-CCHHHHHHHhCCCCchhh-hhhHHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAG-KHNIDIAKILFPDDLPRG-LKFCEDKEAM   98 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   98 (246)
                      ++|+|+||+||||+++...+..++.++++++|.    ......+... .| .+....+..+...  ... ......+...
T Consensus         3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~-~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   75 (207)
T 2go7_A            3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSI----PYDKEKVREF-IFKYSVQDLLVRVAED--RNLDVEVLNQVRAQ   75 (207)
T ss_dssp             -CCEEEECTBTTTEECHHHHHHHHHHHHHHHTC----CCCHHHHHHH-HHHSCHHHHHHHHHHH--HTCCHHHHHHHHHH
T ss_pred             cccEEEEeCCCcccccHHHHHHHHHHHHHHcCC----CCCHHHHHHH-HccccHHHHHHHhhch--hhccHHHHHHHHHH
Confidence            479999999999999999999999999999954    4454444333 34 5555555444211  011 2222333333


Q ss_pred             HHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcC
Q 025896           99 FRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLK  178 (246)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~  178 (246)
                      +.+.......++|++.++|+.|++.|++++++|+....... .++.+++..+|+.+++++..+..||++..+..+++++|
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~  154 (207)
T 2go7_A           76 SLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQ  154 (207)
T ss_dssp             HHTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHT
T ss_pred             HHHhccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhC
Confidence            33333345678999999999999999999999999988888 89999999999999999888889999999999999999


Q ss_pred             CCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          179 VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       179 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      ++++++++|||+.||++||+.+|++++++.++. .      .|+++++++.|  +..++
T Consensus       155 i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~------~a~~v~~~~~e--l~~~l  204 (207)
T 2go7_A          155 LNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y------EGNHRIQALAD--ISRIF  204 (207)
T ss_dssp             CCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C------TTEEECSSTTH--HHHHT
T ss_pred             CCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C------CCCEEeCCHHH--HHHHH
Confidence            999999999999999999999999999998765 2      58999999999  55554

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.97  E-value=1.7e-31  Score=203.03  Aligned_cols=208  Identities=19%  Similarity=0.208  Sum_probs=155.4

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhc-----------CCCHHHH----HHHhCCC
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIA-----------GKHNIDI----AKILFPD   83 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~----~~~~~~~   83 (246)
                      ++++|+|+||+||||+++...+..++.++++++|    .......+...+.           +......    +..+...
T Consensus         3 ~~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (240)
T 3smv_A            3 LTDFKALTFDCYGTLIDWETGIVNALQPLAKRTG----KTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKE   78 (240)
T ss_dssp             GGGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHT----CCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHH
T ss_pred             CccceEEEEeCCCcCcCCchhHHHHHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999984    4455555444332           1111111    1111110


Q ss_pred             -CchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCC
Q 025896           84 -DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECER  162 (246)
Q Consensus        84 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~  162 (246)
                       ...    ........+.... ....++|++.++|+.|++ |++++++||.+...+...++.  +..+|+.++++++.+.
T Consensus        79 ~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~~  150 (240)
T 3smv_A           79 WGLE----PDAAEREEFGTSV-KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVGS  150 (240)
T ss_dssp             TTCC----CCHHHHHHHHTGG-GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHTS
T ss_pred             hCCC----CCHHHHHHHHHHH-hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccCC
Confidence             000    0011112222222 357899999999999999 799999999999888888877  5578999999999999


Q ss_pred             CCCChHHHHHH---HHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCC-------ChhhhhccCCcEEecCCCCh
Q 025896          163 AKPFPDPYFKA---LEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRN-------PEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       163 ~kp~~~~~~~~---~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~-------~~~~~~~~~~~~~i~~~~el  231 (246)
                      .||++..|..+   ++++|++|++|++|||+. +|+.+|+.+|+.+++++++.       ...+.....|+++++++.| 
T Consensus       151 ~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~e-  229 (240)
T 3smv_A          151 YKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGE-  229 (240)
T ss_dssp             CTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHH-
T ss_pred             CCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHH-
Confidence            99999999988   899999999999999997 99999999999999998751       2234445789999999999 


Q ss_pred             hhHHHHhhh
Q 025896          232 KLWSALEEL  240 (246)
Q Consensus       232 ~~~~~l~~~  240 (246)
                       +..+++++
T Consensus       230 -l~~~l~~~  237 (240)
T 3smv_A          230 -MAEAHKQA  237 (240)
T ss_dssp             -HHHHHHHH
T ss_pred             -HHHHHHHH
Confidence             66666554

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=5.4e-31  Score=204.92  Aligned_cols=203  Identities=26%  Similarity=0.350  Sum_probs=166.0

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-CchhhhhhHHHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-DLPRGLKFCEDKEAMF   99 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   99 (246)
                      ++|+|+||+||||+++...+..++..+++++|    . ...........|.........+... ...   .........+
T Consensus        34 ~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g----~-~~~~~~~~~~~G~~~~~~~~~~~~~~~~~---~~~~~~~~~~  105 (275)
T 2qlt_A           34 KINAALFDVDGTIIISQPAIAAFWRDFGKDKP----Y-FDAEHVIHISHGWRTYDAIAKFAPDFADE---EYVNKLEGEI  105 (275)
T ss_dssp             EESEEEECCBTTTEECHHHHHHHHHHHHTTCT----T-CCHHHHHHHCTTCCHHHHHHHHCGGGCCH---HHHHHHHHTH
T ss_pred             cCCEEEECCCCCCCCCHHHHHHHHHHHHHHcC----C-CCHHHHHHHhcCCCHHHHHHHHhccCCcH---HHHHHHHHHH
Confidence            48999999999999999988888988888884    1 2344444556688877777776553 211   1222333333


Q ss_pred             HHHhhccCCCcccHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcC
Q 025896          100 RKLASEQLKPISGLDKVKKWIEDR-GLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLK  178 (246)
Q Consensus       100 ~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~  178 (246)
                      .........++||+.++|+.|++. |++++++|+.....++..++.+++. .|+.++++++....||+++.++.+++++|
T Consensus       106 ~~~~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lg  184 (275)
T 2qlt_A          106 PEKYGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLG  184 (275)
T ss_dssp             HHHHCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTT
T ss_pred             HHHHhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcC
Confidence            343334577899999999999999 9999999999999999999999886 48888888888899999999999999999


Q ss_pred             C-------CCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChh
Q 025896          179 V-------SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPK  232 (246)
Q Consensus       179 ~-------~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~  232 (246)
                      +       +|++|++|||+.||++||+.+|+.++++.++++..+.....|+++++++.|+.
T Consensus       185 i~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~  245 (275)
T 2qlt_A          185 FPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIR  245 (275)
T ss_dssp             CCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEE
T ss_pred             CCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcC
Confidence            9       99999999999999999999999999999987776666667999999999854

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.97  E-value=2.5e-31  Score=201.09  Aligned_cols=136  Identities=21%  Similarity=0.300  Sum_probs=123.3

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      ....++|++.++|+.|++.|++++++||.+...++..++++|+..+|+.+++++..+..||++..++.+++++|++|+++
T Consensus        93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  172 (230)
T 3um9_A           93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEI  172 (230)
T ss_dssp             TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhhhc
Q 025896          185 FVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK  242 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~~  242 (246)
                      ++|||+.+|+.+|+.+|+.++++.++.+..+.....|+++++++.|  +..+++++..
T Consensus       173 ~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~e--l~~~l~~~~~  228 (230)
T 3um9_A          173 LFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGV--LASRFSPVDE  228 (230)
T ss_dssp             EEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHH--HHHTCCC---
T ss_pred             EEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHH--HHHHHHHhhh
Confidence            9999999999999999999999999866655556789999999999  6676666543

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.97  E-value=9.9e-31  Score=194.76  Aligned_cols=197  Identities=20%  Similarity=0.257  Sum_probs=151.1

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAM   98 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (246)
                      ++++|+|+||+||||+++...+.    .+++.+|..    ..... ...+.+...             ........+...
T Consensus         3 ~~~~k~iifDlDGTL~d~~~~~~----~~~~~~g~~----~~~~~-~~~~~~~~~-------------~~~~~~~~~~~~   60 (205)
T 3m9l_A            3 LSEIKHWVFDMDGTLTIAVHDFA----AIREALSIP----AEDDI-LTHLAALPA-------------DESAAKHAWLLE   60 (205)
T ss_dssp             GGGCCEEEECTBTTTEEEEECHH----HHHHHTTCC----TTSCH-HHHHHHSCH-------------HHHHHHHHHHHH
T ss_pred             cccCCEEEEeCCCcCcccHHHHH----HHHHHhCCC----chHHH-HHHHhcCCh-------------HHHHHHHHHHHH
Confidence            45689999999999999876543    566677543    22211 122211111             111112223333


Q ss_pred             HHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc--eEEEecCCCCCCCCChHHHHHHHHH
Q 025896           99 FRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF--QVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      +.........++||+.++|++|++.|++++++||.....++..++.+|+..+|  +.+++++. +..||++..++.++++
T Consensus        61 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~  139 (205)
T 3m9l_A           61 HERDLAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-APPKPHPGGLLKLAEA  139 (205)
T ss_dssp             THHHHEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SCCTTSSHHHHHHHHH
T ss_pred             HHHHHhhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CCCCCCHHHHHHHHHH
Confidence            33444456789999999999999999999999999999999999999999999  77887766 8899999999999999


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhhhcC
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKN  243 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~~~  243 (246)
                      +|+++++|++|||+.+|+++|+.+|+.++++.++...   ....|+++++++.|  ++..++.-.+.
T Consensus       140 ~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~---~~~~ad~v~~~~~e--l~~~~~~~~~~  201 (205)
T 3m9l_A          140 WDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNP---WPELTDWHARDCAQ--LRDLLSAEGHH  201 (205)
T ss_dssp             TTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCS---CGGGCSEECSSHHH--HHHHHHHTTCC
T ss_pred             cCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCc---ccccCCEEeCCHHH--HHHHHHhcccc
Confidence            9999999999999999999999999999999887532   23468999999999  77777664443

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=2.1e-30  Score=196.16  Aligned_cols=202  Identities=17%  Similarity=0.224  Sum_probs=148.3

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHH----------HHhcCCCHHHH----HH---HhCCCC
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFV----------ENIAGKHNIDI----AK---ILFPDD   84 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----~~---~~~~~~   84 (246)
                      +|+|+||+||||+++...+..++..+++.++.. |   ......          ..+.+......    ..   ..... 
T Consensus         8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~-g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   82 (234)
T 3ddh_A            8 IKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPY-G---TSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNG-   82 (234)
T ss_dssp             CCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGG-S---CHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTT-
T ss_pred             ccEEEEeCCCCCccCcchHHHHHHHHHHHHHhc-C---CHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcC-
Confidence            899999999999999998888888777776432 2   221111          12233333221    11   11111 


Q ss_pred             chhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcC-CeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCC
Q 025896           85 LPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRG-LKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERA  163 (246)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g-~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~  163 (246)
                       .............+.+.......++|++.++|+.|++.| ++++++||.....++..++.+++.++|+.++++     .
T Consensus        83 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~-----~  156 (234)
T 3ddh_A           83 -KIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVM-----S  156 (234)
T ss_dssp             -CCCHHHHHHHHHHHHHHTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEE-----S
T ss_pred             -CCCHHHHHHHHHHHHHHhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeec-----C
Confidence             001112223334444545556789999999999999999 999999999998999999999999999988753     5


Q ss_pred             CCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCC----CChhhhhccCCcEEecCCCChhhHHH
Q 025896          164 KPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTR----NPEHVLLEANPTFLIKDYDDPKLWSA  236 (246)
Q Consensus       164 kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~----~~~~~~~~~~~~~~i~~~~el~~~~~  236 (246)
                      ||++..++.+++++|++|++|++|||+. ||+.||+.+|+.++++.++    +...+.....++++++++.|  +..+
T Consensus       157 kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~e--l~~~  232 (234)
T 3ddh_A          157 DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDD--LLSL  232 (234)
T ss_dssp             CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGG--HHHH
T ss_pred             CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHH--HHHh
Confidence            8999999999999999999999999997 9999999999999999554    33333344455999999999  5444

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.97  E-value=5.2e-30  Score=194.37  Aligned_cols=135  Identities=17%  Similarity=0.277  Sum_probs=122.1

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      ....++|++.++|+.|++. ++++++||.+....+..++.+|+..+|+.+++++..+..||++..++.+++++|++|+++
T Consensus        97 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  175 (234)
T 3u26_A           97 RYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEA  175 (234)
T ss_dssp             HHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred             hhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhE
Confidence            4578999999999999999 999999999999999999999999999999999988999999999999999999999999


Q ss_pred             EEEecCh-hhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhhhcC
Q 025896          185 FVFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKN  243 (246)
Q Consensus       185 ~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~~~  243 (246)
                      ++|||+. ||+.||+.+|++++++.+++...+.. ..|+++++++.|  +..+++++.+.
T Consensus       176 ~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~-~~a~~~~~~~~e--l~~~l~~~~~~  232 (234)
T 3u26_A          176 VYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFW-DKCDFIVSDLRE--VIKIVDELNGQ  232 (234)
T ss_dssp             EEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGG-GGCSEEESSTHH--HHHHHHHHC--
T ss_pred             EEEcCCcHHHHHHHHHcCCEEEEECCCCCccccc-cCCCEeeCCHHH--HHHHHHHHhhc
Confidence            9999998 99999999999999999986555544 389999999999  77777776543

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.97  E-value=4.4e-31  Score=200.24  Aligned_cols=133  Identities=17%  Similarity=0.172  Sum_probs=122.2

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ...++|++.++|+.|++.|++++++||.+...++..++++|+..+|+.+++++..+..||++..|..+++++|++|++|+
T Consensus        97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  176 (233)
T 3umb_A           97 CLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQIL  176 (233)
T ss_dssp             SCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEE
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEE
Confidence            47889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      +|||+.+|+.+|+.+|+.++++.++.+..+.....|+++++++.|  +..++++.
T Consensus       177 ~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~e--l~~~l~~~  229 (233)
T 3umb_A          177 FVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRD--LLQFVQAR  229 (233)
T ss_dssp             EEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHH--HHHHHHC-
T ss_pred             EEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHH--HHHHHHHh
Confidence            999999999999999999999999865555556789999999999  66666553

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.97  E-value=8.9e-30  Score=195.37  Aligned_cols=212  Identities=16%  Similarity=0.104  Sum_probs=153.8

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCC----ch----HHHHH-HhcCCCHHHHHHHhCCC-----Cch
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPI----TE----DFFVE-NIAGKHNIDIAKILFPD-----DLP   86 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~-~~~~~~~~~~~~~~~~~-----~~~   86 (246)
                      ++|+|+||+||||+|+...+..++..+++.+... |...    ..    ..... ...|.........+...     ...
T Consensus        12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~   90 (251)
T 2pke_A           12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGY-LDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEAR   90 (251)
T ss_dssp             SCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTT-CCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTC
T ss_pred             ceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCC
Confidence            5899999999999999999999998888644221 3332    11    11111 24577665544433210     000


Q ss_pred             hhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCC
Q 025896           87 RGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPF  166 (246)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~  166 (246)
                      ........+...+.+.......++||+.++|+.|+ .|++++++||......+..++.+++..+|+.++++     .||+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~-----~kp~  164 (251)
T 2pke_A           91 IEARDIQRIVEIGRATLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV-----SEKD  164 (251)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE-----SCCS
T ss_pred             CChHHHHHHHHHHHHHHhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee-----CCCC
Confidence            01122333344444444556789999999999999 89999999999999999999999999999988763     6899


Q ss_pred             hHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChh----h-hhccCCcE-EecCCCChhhHHHHhh
Q 025896          167 PDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEH----V-LLEANPTF-LIKDYDDPKLWSALEE  239 (246)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~----~-~~~~~~~~-~i~~~~el~~~~~l~~  239 (246)
                      +..+..+++++|++|++|++|||+. ||+.+|+.+|+.++++.++....    + .....|++ +++++.|  +..++++
T Consensus       165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~e--l~~~l~~  242 (251)
T 2pke_A          165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSG--WPAAVRA  242 (251)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGG--HHHHHHH
T ss_pred             HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHH--HHHHHHH
Confidence            9999999999999999999999999 99999999999999998774321    1 23457898 9999999  5566655


Q ss_pred             hh
Q 025896          240 LD  241 (246)
Q Consensus       240 ~~  241 (246)
                      +.
T Consensus       243 ~~  244 (251)
T 2pke_A          243 LD  244 (251)
T ss_dssp             HH
T ss_pred             hC
Confidence            44

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.97  E-value=1.3e-30  Score=197.66  Aligned_cols=135  Identities=18%  Similarity=0.241  Sum_probs=118.4

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ...++|++.++|+.|++.|++++++||.+...++..++++|+..+|+.++++++.+..||++..++.+++++|++|++|+
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  172 (232)
T 1zrn_A           93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL  172 (232)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred             cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhhhc
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK  242 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~~  242 (246)
                      +|||+.+|+.+|+.+|+.++++.++....+.....|+++++++.|  +..++++...
T Consensus       173 ~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~e--l~~~l~~~~~  227 (232)
T 1zrn_A          173 FVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRA--VVELFETAAG  227 (232)
T ss_dssp             EEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHH--HHTTC-----
T ss_pred             EEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHH--HHHHHHhhcc
Confidence            999999999999999999999988754434344678999999998  5556655443

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.97  E-value=2.3e-29  Score=191.83  Aligned_cols=133  Identities=16%  Similarity=0.210  Sum_probs=119.0

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ...++||+.++|++|+++|++++++||.+...++..++++|+..+|+.++++++.+..||++..|+.+++++|++|++|+
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  182 (240)
T 2no4_A          103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC  182 (240)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            47889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCC-cEEecCCCChhhHHHHhhhh
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANP-TFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~-~~~i~~~~el~~~~~l~~~~  241 (246)
                      +|||+.+|+.+|+.+|+.++++.+++. .+.....| +++++++.|  +..++.++.
T Consensus       183 ~iGD~~~Di~~a~~aG~~~~~v~~~~~-~~~~~~~~~~~~~~~~~e--l~~~l~~~~  236 (240)
T 2no4_A          183 FVSSNAWDLGGAGKFGFNTVRINRQGN-PPEYEFAPLKHQVNSLSE--LWPLLAKNV  236 (240)
T ss_dssp             EEESCHHHHHHHHHHTCEEEEECTTCC-CCCCTTSCCSEEESSGGG--HHHHHCC--
T ss_pred             EEeCCHHHHHHHHHCCCEEEEECCCCC-CCcccCCCCceeeCCHHH--HHHHHHHhh
Confidence            999999999999999999999998865 22233567 999999999  666665543

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.97  E-value=2.2e-30  Score=199.68  Aligned_cols=125  Identities=12%  Similarity=0.093  Sum_probs=110.2

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc---CCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL---GLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKD  182 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~  182 (246)
                      ...++||+.++|+.|+++|++++|+||++...++..++++   ++.++|+.++++ +.+ .||+|+.|+.+++++|++|+
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~  205 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCSTN  205 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGG
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcCcc
Confidence            4689999999999999999999999999998889888854   599999999988 778 99999999999999999999


Q ss_pred             cEEEEecChhhhHHHHhcCCCEEEEcCCCC-hhhhhccCCcEEecCCCChh
Q 025896          183 HTFVFEDSVSGIKAGVAAGLPVVGLTTRNP-EHVLLEANPTFLIKDYDDPK  232 (246)
Q Consensus       183 ~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~i~~~~el~  232 (246)
                      +|+||||+.+|+.+|+++|+.++++.++.. ..+.....|+++++++.|+.
T Consensus       206 ~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~  256 (261)
T 1yns_A          206 NILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELY  256 (261)
T ss_dssp             GEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCB
T ss_pred             cEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhC
Confidence            999999999999999999999999987532 22222346889999999853

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.97  E-value=9.3e-30  Score=192.53  Aligned_cols=209  Identities=18%  Similarity=0.259  Sum_probs=151.4

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCC---chHHHHH---Hhc------CCCHH----HHHHHhCCC-
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPI---TEDFFVE---NIA------GKHNI----DIAKILFPD-   83 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~------~~~~~----~~~~~~~~~-   83 (246)
                      ++|+|+||+||||+++...+..+...+++.++.. +...   ....+..   .+.      .....    .....+... 
T Consensus         1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (230)
T 3vay_A            1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQ-APKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDA   79 (230)
T ss_dssp             CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHH-CTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTT
T ss_pred             CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHh-cCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHh
Confidence            3799999999999999988777766665555211 1111   1111111   000      00001    111111111 


Q ss_pred             --CchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCC
Q 025896           84 --DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECE  161 (246)
Q Consensus        84 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~  161 (246)
                        .......+.......+.... ....++||+.++|+.|++. ++++++||.+..     ++.+|+..+|+.+++++..+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~  152 (230)
T 3vay_A           80 GYDSDEAQQLADESFEVFLHGR-HQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLG  152 (230)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHH-TCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHT
T ss_pred             CCChhhhHHHHHHHHHHHHHhh-ccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccC
Confidence              22233334444444444432 4578999999999999998 999999998765     78889999999999999889


Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          162 RAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       162 ~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ..||++..|+.+++++|++|+++++|||+. +|+.+|+.+|+.++++.++....+. ...|+++++++.|  +..++++.
T Consensus       153 ~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~l~e--l~~~l~~~  229 (230)
T 3vay_A          153 IGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHNLSQ--LPEVLARW  229 (230)
T ss_dssp             CCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESSGGG--HHHHHHTT
T ss_pred             CCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECCHHH--HHHHHHhh
Confidence            999999999999999999999999999998 9999999999999999998654443 6789999999999  67766653

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.97  E-value=1.2e-28  Score=181.08  Aligned_cols=179  Identities=20%  Similarity=0.230  Sum_probs=141.0

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMF   99 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (246)
                      |++|+|+||+||||+++...+..++.++++++|    ...........+.+.........+...     ..+...+...+
T Consensus         4 M~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~   74 (190)
T 2fi1_A            4 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYG----ITQDHDSVYQALKVSTPFAIETFAPNL-----ENFLEKYKENE   74 (190)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTT----CCCCHHHHHHHHHHCHHHHHHHHCTTC-----TTHHHHHHHHH
T ss_pred             CcccEEEEeCCCCcCCCHHHHHHHHHHHHHHhC----CCCCHHHHHHHHccccHHHHHHHhhhH-----HHHHHHHHHHH
Confidence            358999999999999999989999999999994    445555544444444333333332211     11222333334


Q ss_pred             HHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          100 RKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       100 ~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      ...... ..++|++.++|+.|++.|++++++||.. ...+..++++++..+|+.++++++....||++..++.+++++|+
T Consensus        75 ~~~~~~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  152 (190)
T 2fi1_A           75 ARELEH-PILFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI  152 (190)
T ss_dssp             HHHTTS-CCBCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC
T ss_pred             HHhcCc-CccCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCC
Confidence            443333 3489999999999999999999999986 46788899999999999999998888999999999999999999


Q ss_pred             CCCcEEEEecChhhhHHHHhcCCCEEEEcCCC
Q 025896          180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       180 ~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~  211 (246)
                      +  ++++|||+.||+++|+.+|++++++.++.
T Consensus       153 ~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~  182 (190)
T 2fi1_A          153 S--SGLVIGDRPIDIEAGQAAGLDTHLFTSIV  182 (190)
T ss_dssp             S--SEEEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred             C--eEEEEcCCHHHHHHHHHcCCeEEEECCCC
Confidence            8  99999999999999999999999997653

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.96  E-value=4.4e-29  Score=194.77  Aligned_cols=214  Identities=18%  Similarity=0.207  Sum_probs=147.8

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhc---CCCHHHHHHHhCCCCchhhhhhHHHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIA---GKHNIDIAKILFPDDLPRGLKFCEDK   95 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (246)
                      ..++|+|+||+||||+++...+..++..++..+-.. +.............   .... .....+.........    .+
T Consensus        54 ~~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~----~~  127 (282)
T 3nuq_A           54 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQT-HLKLSPEDAHVLNNSYYKEYG-LAIRGLVMFHKVNAL----EY  127 (282)
T ss_dssp             -CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHH-CTTSCHHHHHHHHHHHHHHTH-HHHHHHHHTTSSCHH----HH
T ss_pred             CCCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHh-hhHHHHHHHcCCCHH----HH
Confidence            457899999999999999888777777777664100 11222222111110   0000 001111111000111    11


Q ss_pred             HHHHHHHh--hccCCCcccHHHHHHHHHHcCC--eEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC----CCCCCCh
Q 025896           96 EAMFRKLA--SEQLKPISGLDKVKKWIEDRGL--KRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC----ERAKPFP  167 (246)
Q Consensus        96 ~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~--~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~----~~~kp~~  167 (246)
                      ...+....  .....++||+.++|+.|++.|+  +++|+||+....++..++.+|+..+|+.+++++..    ...||++
T Consensus       128 ~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~  207 (282)
T 3nuq_A          128 NRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHV  207 (282)
T ss_dssp             HHHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSH
T ss_pred             HHHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCH
Confidence            12222111  2347789999999999999999  99999999999999999999999999999987654    4579999


Q ss_pred             HHHHHHHHHcCCCC-CcEEEEecChhhhHHHHhcCCC-EEEEcCCCChhh-hhccCCcEEecCCCChhhHHHHhhh
Q 025896          168 DPYFKALEMLKVSK-DHTFVFEDSVSGIKAGVAAGLP-VVGLTTRNPEHV-LLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       168 ~~~~~~~~~~~~~~-~~~~~igD~~~Di~~a~~~G~~-~i~v~~~~~~~~-~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ..|+.+++++|++| ++|++|||+.+|+.||+.+|++ ++++.++..... .....++++++++.|  +..++.++
T Consensus       208 ~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~e--l~~~l~~l  281 (282)
T 3nuq_A          208 KAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILE--LPHVVSDL  281 (282)
T ss_dssp             HHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGG--GGGTSGGG
T ss_pred             HHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHH--HHHHhhhh
Confidence            99999999999999 9999999999999999999995 666665543322 224578999999999  66666543

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.96  E-value=8.3e-29  Score=190.23  Aligned_cols=133  Identities=21%  Similarity=0.302  Sum_probs=117.7

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ...++||+.++|+.|+  |++++++||.+...++..++++|+..+|+.++++++.+..||++..|+.+++++|++|++|+
T Consensus        91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  168 (253)
T 1qq5_A           91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL  168 (253)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEE
T ss_pred             cCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence            4678999999999999  89999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcC-----------------------CCChhhhhccCCcEEecCCCChhhHHHHhhhhc
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTT-----------------------RNPEHVLLEANPTFLIKDYDDPKLWSALEELDK  242 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~-----------------------~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~~  242 (246)
                      +|||+.+|+.+|+.+|+.++++++                       +....+.....|+++++++.|  +..++.++.+
T Consensus       169 ~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e--l~~~l~~~~~  246 (253)
T 1qq5_A          169 FVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGD--LPRLVRGMAG  246 (253)
T ss_dssp             EEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGG--HHHHHHHHC-
T ss_pred             EEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHH--HHHHHHHhcc
Confidence            999999999999999999999987                       322223334679999999999  6666666544

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.96  E-value=1.9e-28  Score=187.41  Aligned_cols=201  Identities=8%  Similarity=0.080  Sum_probs=135.0

Q ss_pred             CCcceEEEeCCCccccChhhH-------HHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-----Cchh
Q 025896           20 APLEAVLFDVDGTLCDSDPLH-------HYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-----DLPR   87 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~   87 (246)
                      +++|+|+||+||||+|+....       ...+...+..++    ...........+.+.+.......+...     ....
T Consensus        29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~  104 (253)
T 2g80_A           29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDT----RDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPI  104 (253)
T ss_dssp             CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCC----TTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHH
T ss_pred             CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhc----CcHHHHHHHHHhhhccHHHHHHHHHHHHhcccchHH
Confidence            358999999999999987432       333344444442    222222222333344444433333211     1111


Q ss_pred             hhhhHH-HHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc-----------CCCCcceEEE
Q 025896           88 GLKFCE-DKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL-----------GLSDFFQVVI  155 (246)
Q Consensus        88 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~-----------~l~~~f~~~~  155 (246)
                      ...... .+...|.. ......++||+.++|++    |++++|+||++...++..++++           ++.++|+.++
T Consensus       105 ~~~~~~~~~~~~~~~-~~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f  179 (253)
T 2g80_A          105 LKQLQGYVWAHGYES-GQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYF  179 (253)
T ss_dssp             HHHHHHHHHHHHHHT-TSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEE
T ss_pred             HHHHHHHHHHHHHHh-CcccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEE
Confidence            111111 12222321 12246789999999988    8999999999999999999876           4777787777


Q ss_pred             ecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          156 LGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       156 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                      .+ .....||+|+.|..+++++|++|++|+||||+.+|+.+|+++|+.++++.+++... .....++++++++.|+
T Consensus       180 ~~-~~~g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~-~~~~~~~~~i~~l~eL  253 (253)
T 2g80_A          180 DI-NTSGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAP-VPDGQKYQVYKNFETL  253 (253)
T ss_dssp             CH-HHHCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCC-CCSSCCSCEESCSTTC
T ss_pred             ee-eccCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCC-cccccCCCccCChhhC
Confidence            55 23125999999999999999999999999999999999999999999998753321 1122478899999873

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.96  E-value=8.7e-30  Score=189.06  Aligned_cols=129  Identities=16%  Similarity=0.283  Sum_probs=115.4

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ...++||+.+ |+.|+++ ++++++||.+...++..++++|+..+|+.++++++.+..||+|..+..+++++|  |++++
T Consensus        72 ~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~  147 (201)
T 2w43_A           72 NLKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAF  147 (201)
T ss_dssp             TCEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCE
T ss_pred             ccccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEE
Confidence            3778999999 9999999 999999999999999999999999999999999988999999999999999999  99999


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      +|||+.+|+.+|+.+|+.++++.++....+.....|+++++++.|  +..++.++
T Consensus       148 ~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~e--l~~~l~~~  200 (201)
T 2w43_A          148 LVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKE--LYEWILRY  200 (201)
T ss_dssp             EEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHH--HHHHHHHH
T ss_pred             EEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHH--HHHHHHhc
Confidence            999999999999999999999998754433334579999999999  56666543

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.96  E-value=1.6e-29  Score=190.33  Aligned_cols=200  Identities=17%  Similarity=0.166  Sum_probs=136.9

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHh---cCCC------------HHHHHHHhCCCCc
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENI---AGKH------------NIDIAKILFPDDL   85 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------~~~~~~~~~~~~~   85 (246)
                      ++|+|+||+||||+|+...+..++..+++.+|.    +.....+...+   .|..            .......+.... 
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~-   76 (220)
T 2zg6_A            2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGY----DLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYP-   76 (220)
T ss_dssp             CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTC----CCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCC-
T ss_pred             CceEEEEcCCCceecccccHHHHHHHHHHHhCC----CCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCC-
Confidence            579999999999999998888999999999954    34433332221   1211            222222221111 


Q ss_pred             hhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCC
Q 025896           86 PRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKP  165 (246)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp  165 (246)
                        .......+...+  .......++||+.++|++|+++|++++++||.+. .++..++++|+.++|+.++++++.+..||
T Consensus        77 --~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp  151 (220)
T 2zg6_A           77 --SERLVKELKEAD--IRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAVKP  151 (220)
T ss_dssp             --CHHHHHHHHHTT--TTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC----------
T ss_pred             --cHHHHHHHHHHh--hcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCCCC
Confidence              111111111111  0123467899999999999999999999999976 57889999999999999999999999999


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChh-hhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVS-GIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~-Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      +|..|..+++++|++|   ++|||+.+ |+.+|+.+|+.++++.++....+.     +++++++.|  +..++.++
T Consensus       152 ~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~-----~~~i~~l~e--l~~~l~~~  217 (220)
T 2zg6_A          152 NPKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDV-----RDRVKNLRE--ALQKIEEM  217 (220)
T ss_dssp             -CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTC-----CSCBSSHHH--HHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCc-----ceEECCHHH--HHHHHHHh
Confidence            9999999999999988   99999998 999999999999999866322211     567888888  55566543

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.96  E-value=5.6e-28  Score=178.19  Aligned_cols=130  Identities=22%  Similarity=0.291  Sum_probs=108.8

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCC-Cc
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSK-DH  183 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~  183 (246)
                      ....++||+.++|++|+++|++++|+|+.........+   +  .+|+.++++++....||+|+.|..+++++++.+ ++
T Consensus        33 ~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~  107 (196)
T 2oda_A           33 EHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEG  107 (196)
T ss_dssp             GGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTT
T ss_pred             ccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence            35678999999999999999999999999877664333   2  468889999998999999999999999999975 89


Q ss_pred             EEEEecChhhhHHHHhcCCCEEEEcCCCCh------------------------hhhhccCCcEEecCCCChhhHHHHhh
Q 025896          184 TFVFEDSVSGIKAGVAAGLPVVGLTTRNPE------------------------HVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       184 ~~~igD~~~Di~~a~~~G~~~i~v~~~~~~------------------------~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      |+||||+.+|+.+|+++|+.+|++.++...                        .++....|+++++++.|  +..++..
T Consensus       108 ~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~e--L~~~l~~  185 (196)
T 2oda_A          108 CVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGE--LESCLAD  185 (196)
T ss_dssp             CEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGG--HHHHHHH
T ss_pred             EEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHH--HHHHHHH
Confidence            999999999999999999999999988531                        12234579999999999  4555554


Q ss_pred             hh
Q 025896          240 LD  241 (246)
Q Consensus       240 ~~  241 (246)
                      +.
T Consensus       186 ~~  187 (196)
T 2oda_A          186 IA  187 (196)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.96  E-value=5.8e-28  Score=178.98  Aligned_cols=178  Identities=18%  Similarity=0.227  Sum_probs=134.6

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchH-HHHHH-----hcC-CCHHHHHHHhCCC-CchhhhhhH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITED-FFVEN-----IAG-KHNIDIAKILFPD-DLPRGLKFC   92 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~-~~~~~~~~~~~~~-~~~~~~~~~   92 (246)
                      ++|+|+||+||||+++.. ...++..+++++|..    .... .....     ..+ ......+..+... .....   .
T Consensus         3 ~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~   74 (200)
T 3cnh_A            3 TIKALFWDIGGVLLTNGW-DREQRADVAQRFGLD----TDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFT---P   74 (200)
T ss_dssp             CCCEEEECCBTTTBCCSS-CHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSC---H
T ss_pred             CceEEEEeCCCeeECCCc-chHHHHHHHHHcCCC----HHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCC---H
Confidence            589999999999999875 356778888888542    2211 11111     112 1223333333322 11000   1


Q ss_pred             HHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHH
Q 025896           93 EDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFK  172 (246)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~  172 (246)
                      .    .+.+.......++|++.++|+.|+++| +++++||.+...++..++++|+..+|+.+++++..+..||+++.+..
T Consensus        75 ~----~~~~~~~~~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~  149 (200)
T 3cnh_A           75 E----DFRAVMEEQSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRL  149 (200)
T ss_dssp             H----HHHHHHHHTCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHH
T ss_pred             H----HHHHHHHhcCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHH
Confidence            1    112222234569999999999999999 99999999999999999999999999999999888899999999999


Q ss_pred             HHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCC
Q 025896          173 ALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       173 ~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~  211 (246)
                      +++++|++|+++++|||+.+|+.+|+.+|+.++++.++.
T Consensus       150 ~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~  188 (200)
T 3cnh_A          150 GLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAA  188 (200)
T ss_dssp             HHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCHH
T ss_pred             HHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCch
Confidence            999999999999999999999999999999999997764

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.95  E-value=1.3e-27  Score=175.66  Aligned_cols=133  Identities=20%  Similarity=0.304  Sum_probs=117.0

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCH---HHHHHHHHhcCCCCcceEEEecCCC----CCCCCChHHHHHHHHHcC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPR---ENAELMISKLGLSDFFQVVILGDEC----ERAKPFPDPYFKALEMLK  178 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~----~~~kp~~~~~~~~~~~~~  178 (246)
                      ...++||+.++|++|+++|++++|+||++.   ..+...++++|+..+|+.++++++.    +..||+|..|+.+++++|
T Consensus        32 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~  111 (189)
T 3ib6_A           32 EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQ  111 (189)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHT
T ss_pred             CceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcC
Confidence            478999999999999999999999999987   8899999999999999999999876    788999999999999999


Q ss_pred             CCCCcEEEEecC-hhhhHHHHhcCCCEEEEcCCCC---hhhhhccCCcEEec--CCCChhhHHHHhhh
Q 025896          179 VSKDHTFVFEDS-VSGIKAGVAAGLPVVGLTTRNP---EHVLLEANPTFLIK--DYDDPKLWSALEEL  240 (246)
Q Consensus       179 ~~~~~~~~igD~-~~Di~~a~~~G~~~i~v~~~~~---~~~~~~~~~~~~i~--~~~el~~~~~l~~~  240 (246)
                      ++|++++||||+ .+|+.+|+++|+.++++.++..   ........|+++++  ++.+  +..+++-.
T Consensus       112 ~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~--l~~~l~l~  177 (189)
T 3ib6_A          112 IDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLAD--VPEALLLL  177 (189)
T ss_dssp             CCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGG--HHHHHHHH
T ss_pred             CCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHh--HHHHHHHH
Confidence            999999999999 6999999999999999988853   23333348999999  9999  45544433

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.95  E-value=7.7e-28  Score=179.75  Aligned_cols=182  Identities=13%  Similarity=0.113  Sum_probs=128.6

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhh-hhhHHHH---
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRG-LKFCEDK---   95 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---   95 (246)
                      +++|+|+||+||||+++.....   ...++.+|.    ....... ..+.+......+.... ...... ..+...+   
T Consensus         3 ~m~k~iiFDlDGTL~d~~~~~~---~~~~~~~g~----~~~~~~~-~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~   73 (211)
T 2i6x_A            3 AMIRNIVFDLGGVLIHLNREES---IRRFKAIGV----ADIEEML-DPYLQKGLFLDLESGR-KSEEEFRTELSRYIGKE   73 (211)
T ss_dssp             CCCSEEEECSBTTTEEECHHHH---HHHHHHTTC----TTHHHHT-CC---CCHHHHHHHSS-SCHHHHHHHHHHHHTSC
T ss_pred             ccceEEEEeCCCeeEecchHHH---HHHHHHhCC----chHHHHH-HHHhCchHHHHHHcCC-CCHHHHHHHHHHHhCCC
Confidence            3479999999999999887543   456666743    2221111 1111222221111110 000000 0001100   


Q ss_pred             ---HHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHh------cCCCCcceEEEecCCCCCCCCC
Q 025896           96 ---EAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISK------LGLSDFFQVVILGDECERAKPF  166 (246)
Q Consensus        96 ---~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~------~~l~~~f~~~~~~~~~~~~kp~  166 (246)
                         .............++|++.++|+.|++ |++++++||.+...+...+++      +++..+|+.+++++..+..||+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~  152 (211)
T 2i6x_A           74 LTYQQVYDALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPN  152 (211)
T ss_dssp             CCHHHHHHHHGGGEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTS
T ss_pred             CCHHHHHHHHHHhhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCC
Confidence               011111222235788999999999999 999999999999989888888      8999999999999888899999


Q ss_pred             hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCC
Q 025896          167 PDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~  211 (246)
                      +..++.+++++|++|++|++|||+.+|+.+|+.+|+.+++++++.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~  197 (211)
T 2i6x_A          153 EDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGE  197 (211)
T ss_dssp             HHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred             HHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence            999999999999999999999999999999999999999997764

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.95  E-value=4.6e-28  Score=183.64  Aligned_cols=205  Identities=15%  Similarity=0.067  Sum_probs=143.2

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHH-----HHHHhcCCC-HHHHHHHhCCC-CchhhhhhH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDF-----FVENIAGKH-NIDIAKILFPD-DLPRGLKFC   92 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~   92 (246)
                      .++|+|+||+||||+|+...+..++..+++.+|.    ......     ......|.. ....+..+... ...   ...
T Consensus         9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~   81 (231)
T 2p11_A            9 PHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGA----QNSARYWEIFETLRTELGYADYLGALQRYRLEQPRD---TRL   81 (231)
T ss_dssp             CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTC---TGG
T ss_pred             CCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCC----CcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccc---hHH
Confidence            5689999999999999999999999999999943    222211     111112332 12222221111 001   111


Q ss_pred             HHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHH
Q 025896           93 EDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFK  172 (246)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~  172 (246)
                      ..+...+... .....++||+.++|+.|+++| +++|+||++...++..++++|+.++|+.++..   +  ++++..++.
T Consensus        82 ~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~---~--~~K~~~~~~  154 (231)
T 2p11_A           82 LLMSSFLIDY-PFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGRVLI---Y--IHKELMLDQ  154 (231)
T ss_dssp             GGGHHHHHHC-CGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTTCEEE---E--SSGGGCHHH
T ss_pred             HHHHHHHHHH-HHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEe---c--CChHHHHHH
Confidence            1122233322 235789999999999999999 99999999999999999999998888765532   2  334567777


Q ss_pred             HHHHcCCCCCcEEEEecChh---hhHHHHhcCCCEEEEcCCC---Chhhhhcc-CCcEEecCCCChhhHHHHhhhhc
Q 025896          173 ALEMLKVSKDHTFVFEDSVS---GIKAGVAAGLPVVGLTTRN---PEHVLLEA-NPTFLIKDYDDPKLWSALEELDK  242 (246)
Q Consensus       173 ~~~~~~~~~~~~~~igD~~~---Di~~a~~~G~~~i~v~~~~---~~~~~~~~-~~~~~i~~~~el~~~~~l~~~~~  242 (246)
                      +++  +++|++|++|||+.+   |+.+|+++|+.++++.++.   ........ .|+++++++.|  +..+++++..
T Consensus       155 ~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~e--l~~~l~~~~~  227 (231)
T 2p11_A          155 VME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGD--LVEMDAEWLL  227 (231)
T ss_dssp             HHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGG--GGGCGGGGCC
T ss_pred             HHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHH--HHHHHHHHHH
Confidence            766  799999999999999   9999999999999999873   22333344 48999999999  5666665543

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.95  E-value=8.3e-27  Score=169.92  Aligned_cols=128  Identities=17%  Similarity=0.225  Sum_probs=109.5

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCH---------------HHHHHHHHhcCCCCcceEEEe-----cCCCCCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPR---------------ENAELMISKLGLSDFFQVVIL-----GDECERAKP  165 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~---------------~~~~~~l~~~~l~~~f~~~~~-----~~~~~~~kp  165 (246)
                      ..+++||+.++|++|+++|++++|+||.+.               ..++..++++|  .+|+.++.     ++.....||
T Consensus        25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~KP  102 (179)
T 3l8h_A           25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCACRKP  102 (179)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSSSTT
T ss_pred             HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCCCCC
Confidence            478899999999999999999999999986               56678888888  33555442     466788999


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhh---ccCCcEEecCCCChhhHHHH
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLL---EANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~---~~~~~~~i~~~~el~~~~~l  237 (246)
                      +|..|+.+++++|++|+++++|||+.+|+.+|+.+|+.++++.+++...+..   ...|+++++++.|  +..++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~e--l~~~l  175 (179)
T 3l8h_A          103 LPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAA--VAEQL  175 (179)
T ss_dssp             SSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHH--HHHHH
T ss_pred             CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHH--HHHHH
Confidence            9999999999999999999999999999999999999999999997555444   3578999999999  55554

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.95  E-value=1.9e-26  Score=174.46  Aligned_cols=182  Identities=16%  Similarity=0.155  Sum_probs=130.0

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHH---------hcCC-CHHHHHHHhCCC-Cchhh
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVEN---------IAGK-HNIDIAKILFPD-DLPRG   88 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~~~~~~~~~-~~~~~   88 (246)
                      +++|+|+||+||||+++..   ..+...++.+|+    ..........         ..|. ........+... ...  
T Consensus        26 ~~ik~viFD~DGTL~d~~~---~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--   96 (229)
T 4dcc_A           26 KGIKNLLIDLGGVLINLDR---ERCIENFKKIGF----QNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKM--   96 (229)
T ss_dssp             CCCCEEEECSBTTTBCBCH---HHHHHHHHHHTC----TTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSC--
T ss_pred             CCCCEEEEeCCCeEEeCCh---HHHHHHHHHhCC----CcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCC--
Confidence            4589999999999999874   455667777754    2222222111         1121 222222222111 000  


Q ss_pred             hhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH------HhcCCCCcceEEEecCCCCC
Q 025896           89 LKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI------SKLGLSDFFQVVILGDECER  162 (246)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l------~~~~l~~~f~~~~~~~~~~~  162 (246)
                       .........+..   ....++||+.++|+.|++. ++++|+||++.......+      +.+|+..+|+.++++++.+.
T Consensus        97 -~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~  171 (229)
T 4dcc_A           97 -VSDKQIDAAWNS---FLVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKM  171 (229)
T ss_dssp             -CCHHHHHHHHHT---TBCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTC
T ss_pred             -CCHHHHHHHHHH---HHHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCC
Confidence             000011111111   1235789999999999999 999999999998888554      77788899999999999999


Q ss_pred             CCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhh
Q 025896          163 AKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHV  215 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~  215 (246)
                      .||+|..|+.+++++|++|++|++|||+.+|+.+|+.+|+.+++++++....+
T Consensus       172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~  224 (229)
T 4dcc_A          172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWSH  224 (229)
T ss_dssp             CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGG
T ss_pred             CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence            99999999999999999999999999999999999999999999988754433

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.94  E-value=1.1e-27  Score=178.09  Aligned_cols=107  Identities=14%  Similarity=0.206  Sum_probs=97.0

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHh-cCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISK-LGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      ...++|++.++|++|++.|++++++||.+.......+.+ +|+..+|+.+++++..+..||+++.+..+++++|++++++
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~  168 (206)
T 2b0c_A           89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT  168 (206)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHHe
Confidence            367899999999999999999999999987776666666 6788889999999888899999999999999999999999


Q ss_pred             EEEecChhhhHHHHhcCCCEEEEcCCCC
Q 025896          185 FVFEDSVSGIKAGVAAGLPVVGLTTRNP  212 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~~i~v~~~~~  212 (246)
                      ++|||+.+|+.+|+.+|+.++++.++..
T Consensus       169 ~~vgD~~~Di~~a~~aG~~~~~~~~~~~  196 (206)
T 2b0c_A          169 VFFDDNADNIEGANQLGITSILVKDKTT  196 (206)
T ss_dssp             EEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred             EEeCCCHHHHHHHHHcCCeEEEecCCch
Confidence            9999999999999999999999977653

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.94  E-value=4.3e-27  Score=176.36  Aligned_cols=120  Identities=15%  Similarity=0.152  Sum_probs=104.3

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEec----------CCCCCCCCChHHHHHHH
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILG----------DECERAKPFPDPYFKAL  174 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~----------~~~~~~kp~~~~~~~~~  174 (246)
                      ....++||+.++|+.|++.|++++++||+....++..++++|+..+|+.++..          .....+||++..++.++
T Consensus        72 ~~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~  151 (217)
T 3m1y_A           72 ESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQ  151 (217)
T ss_dssp             TTCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred             hcCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence            34789999999999999999999999999999999999999999999988733          34557899999999999


Q ss_pred             HHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCC
Q 025896          175 EMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYD  229 (246)
Q Consensus       175 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~  229 (246)
                      +++|++|+++++|||+.+|+.+|+.+|+++++  .  .. +.....|++++++.+
T Consensus       152 ~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~--~~-~~l~~~ad~v~~~~d  201 (217)
T 3m1y_A          152 RLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--N--AK-EVLKQHATHCINEPD  201 (217)
T ss_dssp             HHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--S--CC-HHHHTTCSEEECSSB
T ss_pred             HHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--C--cc-HHHHHhcceeecccC
Confidence            99999999999999999999999999998776  2  22 334467999998653

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.94  E-value=6.3e-26  Score=169.44  Aligned_cols=130  Identities=19%  Similarity=0.316  Sum_probs=111.9

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCC---------------HHHHHHHHHhcCCCCcceEEEec------------C
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAP---------------RENAELMISKLGLSDFFQVVILG------------D  158 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~---------------~~~~~~~l~~~~l~~~f~~~~~~------------~  158 (246)
                      ...++||+.++|++|+++|++++|+||.+               ...++..++++|+.  |+.++.+            +
T Consensus        48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~  125 (211)
T 2gmw_A           48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQ  125 (211)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBS
T ss_pred             cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCc
Confidence            47789999999999999999999999998               47788899999987  7766543            3


Q ss_pred             CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCE-EEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          159 ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPV-VGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       159 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~-i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      .....||++.+|+.++++++++|++++||||+.+|+.+|+.+|+.+ +++.++....+.....|+++++++.|  +..++
T Consensus       126 ~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~e--l~~~l  203 (211)
T 2gmw_A          126 VCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLAD--LPQAI  203 (211)
T ss_dssp             CCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGG--HHHHH
T ss_pred             cCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHH--HHHHH
Confidence            4567999999999999999999999999999999999999999999 99998864444444568999999999  56666


Q ss_pred             hh
Q 025896          238 EE  239 (246)
Q Consensus       238 ~~  239 (246)
                      ..
T Consensus       204 ~~  205 (211)
T 2gmw_A          204 KK  205 (211)
T ss_dssp             HC
T ss_pred             Hh
Confidence            55

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.93  E-value=3e-26  Score=172.91  Aligned_cols=194  Identities=14%  Similarity=0.168  Sum_probs=129.5

Q ss_pred             ccCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCc-hHHHHHHhcC-CCHHHHHHHhCCCCchhhhhhHHHH
Q 025896           18 KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPIT-EDFFVENIAG-KHNIDIAKILFPDDLPRGLKFCEDK   95 (246)
Q Consensus        18 ~~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   95 (246)
                      .++++|+|+||+||||+|+..     +..+++.+|..    .. .........+ ......+......    .......+
T Consensus        10 ~~~~~k~viFD~DGTLvd~~~-----~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   76 (225)
T 1nnl_A           10 LFYSADAVCFDVDSTVIREEG-----IDELAKICGVE----DAVSEMTRRAMGGAVPFKAALTERLAL----IQPSREQV   76 (225)
T ss_dssp             HHHHCSEEEEETBTTTBSSCH-----HHHHHHHTTCT----TTC------------CHHHHHHHHHHH----HCCCHHHH
T ss_pred             HHhhCCEEEEeCccccccccc-----HHHHHHHhCCc----HHHHHHHHHHHcCCccHHHHHHHHHHH----hcCCHHHH
Confidence            345689999999999999864     34677777542    21 1111122211 1222222211110    00011111


Q ss_pred             HHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC--CcceEEE--------ecCCCCC---
Q 025896           96 EAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS--DFFQVVI--------LGDECER---  162 (246)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~--~~f~~~~--------~~~~~~~---  162 (246)
                      ...+.   ....+++||+.++|+.|+++|++++|+||++...++..++++|+.  ++|+.++        .+.+...   
T Consensus        77 ~~~~~---~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~  153 (225)
T 1nnl_A           77 QRLIA---EQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTA  153 (225)
T ss_dssp             HHHHH---HSCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGG
T ss_pred             HHHHH---hccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCccc
Confidence            11111   124689999999999999999999999999999999999999997  4787664        3332221   


Q ss_pred             -CCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          163 -AKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       163 -~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                       .+|+|+.++.+++++|+  ++|++|||+.+|+.+|+.+|+ ++++...... +.....++++++++.|+
T Consensus       154 ~~~~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~-~~~~~~~~~~~~~~~el  219 (225)
T 1nnl_A          154 ESGGKGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIR-QQVKDNAKWYITDFVEL  219 (225)
T ss_dssp             STTHHHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCC-HHHHHHCSEEESCGGGG
T ss_pred             CCCchHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCcccc-HHHHhcCCeeecCHHHH
Confidence             35788899999999998  789999999999999999999 8888544322 22334689999999983

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.93  E-value=7.1e-28  Score=184.10  Aligned_cols=202  Identities=17%  Similarity=0.169  Sum_probs=137.0

Q ss_pred             CcceEEEeCCCccccChhhHHHH--HHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC----CchhhhhhHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYA--FREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD----DLPRGLKFCED   94 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~   94 (246)
                      ++|+|+||+||||+++...+..+  +.+.+++.|.    .....   ....|++.......+...    ......... .
T Consensus         2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~----~~~~~---t~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~-~   73 (250)
T 2c4n_A            2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGL----PLVLL---TNYPSQTGQDLANRFATAGVDVPDSVFYTSA-M   73 (250)
T ss_dssp             CCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTC----CEEEE---ESCCSCCHHHHHHHHHHTTCCCCGGGEEEHH-H
T ss_pred             CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCC----cEEEE---ECCCCCCHHHHHHHHHHcCCCCCHHHeEcHH-H
Confidence            47999999999999998766655  4455556643    22211   111255555544444221    111111111 1


Q ss_pred             HHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEE---------------------------------EEeCCCHHHHHHH
Q 025896           95 KEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRA---------------------------------AVTNAPRENAELM  141 (246)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~---------------------------------i~s~~~~~~~~~~  141 (246)
                      ....+.........+++++.++++.+++.|++++                                 ++|+.+ ......
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~  152 (250)
T 2c4n_A           74 ATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGF  152 (250)
T ss_dssp             HHHHHHHTSSCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTT
T ss_pred             HHHHHHHhcCCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCe
Confidence            1122223333446678999999999999999998                                 888875 322222


Q ss_pred             HHhcC-CCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC-hhhhHHHHhcCCCEEEEcCCCCh-hhhhc
Q 025896          142 ISKLG-LSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDS-VSGIKAGVAAGLPVVGLTTRNPE-HVLLE  218 (246)
Q Consensus       142 l~~~~-l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~-~~Di~~a~~~G~~~i~v~~~~~~-~~~~~  218 (246)
                      ++.++ +..+|+.+.+.+....+||++..++.+++++|+++++|++|||+ .||++|++.+|+.++++.+|+.. .+...
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~  232 (250)
T 2c4n_A          153 YPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDS  232 (250)
T ss_dssp             CBCHHHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSS
T ss_pred             eecchHHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhh
Confidence            33333 33445555556667889999999999999999999999999999 69999999999999999998654 33322


Q ss_pred             --cCCcEEecCCCCh
Q 025896          219 --ANPTFLIKDYDDP  231 (246)
Q Consensus       219 --~~~~~~i~~~~el  231 (246)
                        ..|+++++++.|+
T Consensus       233 ~~~~~~~v~~~~~el  247 (250)
T 2c4n_A          233 MPFRPSWIYPSVAEI  247 (250)
T ss_dssp             CSSCCSEEESSGGGC
T ss_pred             cCCCCCEEECCHHHh
Confidence              5799999999884

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.92  E-value=2.4e-25  Score=165.67  Aligned_cols=192  Identities=14%  Similarity=0.199  Sum_probs=132.8

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCC--CchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHH
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVP--ITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMF   99 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (246)
                      +|+|+||+||||++      .++..+++.+|......  .....+.... +.........  ....           ..+
T Consensus         2 ~k~viFD~DGTL~d------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~-----------~~~   61 (206)
T 1rku_A            2 MEIACLDLEGVLVP------EIWIAFAEKTGIDALKATTRDIPDYDVLM-KQRLRILDEH--GLKL-----------GDI   61 (206)
T ss_dssp             CEEEEEESBTTTBC------CHHHHHHHHHTCGGGGCCTTTCCCHHHHH-HHHHHHHHHT--TCCH-----------HHH
T ss_pred             CcEEEEccCCcchh------hHHHHHHHHcCChHHHHHhcCcCCHHHHH-HHHHHHHHHC--CCCH-----------HHH
Confidence            68999999999999      46677888885431000  1111111111 1111111110  0010           011


Q ss_pred             HHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc-eEEEecCCCC--C-CCCChHHHHHHHH
Q 025896          100 RKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECE--R-AKPFPDPYFKALE  175 (246)
Q Consensus       100 ~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~--~-~kp~~~~~~~~~~  175 (246)
                      .+.. ....++||+.++|+.|++. ++++|+||.....++..++++|+..+| +.++++++..  . .+|+|..+..+++
T Consensus        62 ~~~~-~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~  139 (206)
T 1rku_A           62 QEVI-ATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVI  139 (206)
T ss_dssp             HHHH-TTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHH
T ss_pred             HHHH-HhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHH
Confidence            1122 3678999999999999999 999999999999999999999999999 5666655542  1 2488899999999


Q ss_pred             HcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEE-ecCCCChhhHHHHhhhh
Q 025896          176 MLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFL-IKDYDDPKLWSALEELD  241 (246)
Q Consensus       176 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~-i~~~~el~~~~~l~~~~  241 (246)
                      +++..|++|++|||+.+|+.+|+.+|+.+++ .   ...+.....++++ ++++.+  +..+++++.
T Consensus       140 ~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~---~~~~~~~~~~~~~~~~~~~~--l~~~l~~~~  200 (206)
T 1rku_A          140 AFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-H---APENVIREFPQFPAVHTYED--LKREFLKAS  200 (206)
T ss_dssp             HHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-S---CCHHHHHHCTTSCEECSHHH--HHHHHHHHC
T ss_pred             HHHhcCCEEEEEeCChhhHHHHHhcCccEEE-C---CcHHHHHHHhhhccccchHH--HHHHHHHHh
Confidence            9999999999999999999999999998664 2   2333444566775 888888  666666543

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.92  E-value=5.2e-25  Score=173.65  Aligned_cols=172  Identities=14%  Similarity=0.134  Sum_probs=121.6

Q ss_pred             ccCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchH-HHHHHhcCC-CHHHHHHHhCCCCchhhhhhHHHH
Q 025896           18 KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITED-FFVENIAGK-HNIDIAKILFPDDLPRGLKFCEDK   95 (246)
Q Consensus        18 ~~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   95 (246)
                      .++++|+|+||+||||++++..     ..+.+.+|.    ..... .......|. .....+........    ...   
T Consensus       104 ~~~~~kaviFDlDGTLid~~~~-----~~la~~~g~----~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~----~~~---  167 (317)
T 4eze_A          104 PLPANGIIAFDMDSTFIAEEGV-----DEIARELGM----STQITAITQQAMEGKLDFNASFTRRIGMLK----GTP---  167 (317)
T ss_dssp             SCCCSCEEEECTBTTTBSSCHH-----HHHHHHTTC----HHHHHHHHHHHHTTSSCHHHHHHHHHHTTT----TCB---
T ss_pred             cCCCCCEEEEcCCCCccCCccH-----HHHHHHhCC----cHHHHHHHHHHhcCCCCHHHHHHHHHHHhc----CCC---
Confidence            4567899999999999998753     334445532    11111 111222222 11222221111100    000   


Q ss_pred             HHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEec----------CCCCCCCC
Q 025896           96 EAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILG----------DECERAKP  165 (246)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~----------~~~~~~kp  165 (246)
                      ...+... .....++||+.++|++|+++|++++|+||+....++..++++|+..+|+.++..          .....+||
T Consensus       168 ~~~i~~~-~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kp  246 (317)
T 4eze_A          168 KAVLNAV-CDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAAN  246 (317)
T ss_dssp             HHHHHHH-HHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHH
T ss_pred             HHHHHHH-HhCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCC
Confidence            0111111 235789999999999999999999999999999999999999999999877643          23345689


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEE
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVG  206 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~  206 (246)
                      ++..++.+++++|++|+++++|||+.+|+.+|+.+|+.+++
T Consensus       247 kp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~  287 (317)
T 4eze_A          247 KKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             CHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence            99999999999999999999999999999999999997766

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.92  E-value=5.9e-25  Score=167.04  Aligned_cols=193  Identities=11%  Similarity=0.092  Sum_probs=131.6

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHH-HhcC-CCHHHHHHHhCCC-CchhhhhhHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVE-NIAG-KHNIDIAKILFPD-DLPRGLKFCEDKEA   97 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~   97 (246)
                      ++|+|+||+||||++++..     ..+++.++.     .....+.. ...+ .+....+..++.. .......    +..
T Consensus         5 ~~k~viFD~DGTL~d~ds~-----~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~   70 (236)
T 2fea_A            5 RKPFIICDFDGTITMNDNI-----INIMKTFAP-----PEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEE----ITS   70 (236)
T ss_dssp             CCEEEEECCTTTTBSSCHH-----HHHHHHHSC-----THHHHHHHHHHTTSSCHHHHHHHHHTTSBGGGHHH----HHH
T ss_pred             CCcEEEEeCCCCCCccchH-----HHHHHHhch-----hhHHHHHHHHHhCcCcHHHHHHHHHHhcCCChHHH----HHH
Confidence            4689999999999976532     122333321     11122212 2333 3445555555444 2211222    112


Q ss_pred             HHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCC--------CCCChHH
Q 025896           98 MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECER--------AKPFPDP  169 (246)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~--------~kp~~~~  169 (246)
                      +    ......++||+.++|+.|+++|++++|+||++...++..++  ++.++ +.+++++....        .||+|..
T Consensus        71 ~----~~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~  143 (236)
T 2fea_A           71 F----VLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGT  143 (236)
T ss_dssp             H----HHHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTT
T ss_pred             H----HhcCCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccc
Confidence            1    12357899999999999999999999999999988888888  77665 77887765443        7888873


Q ss_pred             -HH-------HHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccC-CcEEecCCCChhhHHHHhh
Q 025896          170 -YF-------KALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEAN-PTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       170 -~~-------~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~-~~~~i~~~~el~~~~~l~~  239 (246)
                       +.       .++++++++|++++||||+.+|+.+|+.+|+.++.  ++ ........+ ++++++++.|  +..++.+
T Consensus       144 ~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~-~~~~~~~~~~~~~~~~~~~e--l~~~l~~  217 (236)
T 2fea_A          144 CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DY-LLNECREQNLNHLPYQDFYE--IRKEIEN  217 (236)
T ss_dssp             CCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HH-HHHHHHHTTCCEECCSSHHH--HHHHHHT
T ss_pred             cccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec--hH-HHHHHHHCCCCeeecCCHHH--HHHHHHH
Confidence             54       88999999999999999999999999999998763  22 122233333 8899999999  5555544

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.92  E-value=8.6e-25  Score=164.15  Aligned_cols=136  Identities=17%  Similarity=0.201  Sum_probs=116.4

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCH---------------HHHHHHHHhcCCCCcceEEEec------------C
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPR---------------ENAELMISKLGLSDFFQVVILG------------D  158 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~---------------~~~~~~l~~~~l~~~f~~~~~~------------~  158 (246)
                      ...++||+.++|++|+++|++++|+||++.               ..+...++++|+.  |+.++.+            +
T Consensus        54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~~~~~  131 (218)
T 2o2x_A           54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIP  131 (218)
T ss_dssp             GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCS
T ss_pred             cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCceeeccc
Confidence            477899999999999999999999999987               6788889999985  5554433            4


Q ss_pred             CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCE-EEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          159 ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPV-VGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       159 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~-i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      ....+||++.+|+.++++++++|++++||||+.+|+.+|+.+|+.+ +++.++....+.....|+++++++.|  +..++
T Consensus       132 ~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~e--l~~~l  209 (218)
T 2o2x_A          132 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGD--LLAAI  209 (218)
T ss_dssp             SCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHH--HHHHH
T ss_pred             CCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHH--HHHHH
Confidence            5678999999999999999999999999999999999999999999 99998865444444578899999999  77778


Q ss_pred             hhhhcCCC
Q 025896          238 EELDKNKD  245 (246)
Q Consensus       238 ~~~~~~~~  245 (246)
                      .++.+.+.
T Consensus       210 ~~~~~~~~  217 (218)
T 2o2x_A          210 ETLGRDNR  217 (218)
T ss_dssp             HHTCCCCC
T ss_pred             HHHhcccC
Confidence            88776653

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.92  E-value=9.8e-25  Score=184.48  Aligned_cols=106  Identities=19%  Similarity=0.231  Sum_probs=92.5

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCC--CHHHHHHHHHhc--CCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNA--PRENAELMISKL--GLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSK  181 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~--~~~~~~~~l~~~--~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~  181 (246)
                      ...++||+.++|+.|+++|++++|+||+  .....+..+...  ++..+||.++++++.+..||+|++|+.+++++|++|
T Consensus        98 ~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p  177 (555)
T 3i28_A           98 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASP  177 (555)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred             hcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCCh
Confidence            4789999999999999999999999998  222222223322  677889999999999999999999999999999999


Q ss_pred             CcEEEEecChhhhHHHHhcCCCEEEEcCCC
Q 025896          182 DHTFVFEDSVSGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       182 ~~~~~igD~~~Di~~a~~~G~~~i~v~~~~  211 (246)
                      ++|++|||+.+|+.+|+.+|+.++++.++.
T Consensus       178 ~~~~~v~D~~~di~~a~~aG~~~~~~~~~~  207 (555)
T 3i28_A          178 SEVVFLDDIGANLKPARDLGMVTILVQDTD  207 (555)
T ss_dssp             GGEEEEESCHHHHHHHHHHTCEEEECSSHH
T ss_pred             hHEEEECCcHHHHHHHHHcCCEEEEECCCc
Confidence            999999999999999999999999998764

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.91  E-value=1.2e-24  Score=162.96  Aligned_cols=124  Identities=9%  Similarity=0.091  Sum_probs=97.2

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC--CcceEEE-e-cCCC----CCCCCChHHH-HHHHHHc
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS--DFFQVVI-L-GDEC----ERAKPFPDPY-FKALEML  177 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~--~~f~~~~-~-~~~~----~~~kp~~~~~-~~~~~~~  177 (246)
                      ..++|++.++|+.|++.|++++++|++....++..++.+|+.  .+|...+ . .+..    ...+|++..+ ..+.+.+
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  160 (219)
T 3kd3_A           81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAK  160 (219)
T ss_dssp             TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHG
T ss_pred             ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHh
Confidence            568899999999999999999999999999999999999994  4564322 2 2221    3466665544 4555666


Q ss_pred             CCCCCcEEEEecChhhhHHHHhcCCCEEEEcCC-CChhhhhccCCcEEecCCCCh
Q 025896          178 KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR-NPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       178 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~~i~~~~el  231 (246)
                      |++++++++|||+.||++|+ ++|+.++++..+ .+..+.....|+++++++.|+
T Consensus       161 ~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el  214 (219)
T 3kd3_A          161 GLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAEL  214 (219)
T ss_dssp             GGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHH
T ss_pred             CCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHH
Confidence            99999999999999999998 589998888766 334444556799999999983

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.91  E-value=3e-26  Score=176.40  Aligned_cols=126  Identities=11%  Similarity=0.076  Sum_probs=103.0

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcce---EEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQ---VVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~---~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      .+++++.++++.|+ .|+++ ++||.+.......+...++..+|+   .+++++....+||+|..|+.+++++|++|++|
T Consensus       122 ~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  199 (259)
T 2ho4_A          122 FHYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEA  199 (259)
T ss_dssp             CBHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGE
T ss_pred             CCHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHE
Confidence            37889999999999 88999 899987655544556667777776   55566777889999999999999999999999


Q ss_pred             EEEecCh-hhhHHHHhcCCCEEEEcCCC-Chhhhh--ccCCcEEecCCCChhhHHHH
Q 025896          185 FVFEDSV-SGIKAGVAAGLPVVGLTTRN-PEHVLL--EANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       185 ~~igD~~-~Di~~a~~~G~~~i~v~~~~-~~~~~~--~~~~~~~i~~~~el~~~~~l  237 (246)
                      ++|||+. +|+.+|+.+|+.++++.++. ...+..  ...|+++++++.|  +..++
T Consensus       200 ~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~--l~~~l  254 (259)
T 2ho4_A          200 VMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPH--AVDHI  254 (259)
T ss_dssp             EEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHH--HHHHH
T ss_pred             EEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHH--HHHHH
Confidence            9999999 99999999999999999883 333221  4579999999999  44444

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.91  E-value=9.3e-24  Score=157.28  Aligned_cols=120  Identities=18%  Similarity=0.251  Sum_probs=96.2

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCC----------CCCCCCChHHHHHHHH
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDE----------CERAKPFPDPYFKALE  175 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~----------~~~~kp~~~~~~~~~~  175 (246)
                      ...++|++.++|+.|+++|++++++|++.....+..++.+++..+|+..+...+          ....++++..+..+++
T Consensus        74 ~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~  153 (211)
T 1l7m_A           74 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK  153 (211)
T ss_dssp             TCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence            356789999999999999999999999988888888888898877765442211          1224567889999999


Q ss_pred             HcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecC--CCC
Q 025896          176 MLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKD--YDD  230 (246)
Q Consensus       176 ~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~--~~e  230 (246)
                      ++|+++++|++|||+.||++|++.+|+.++ +.   .. +.....|++++++  +.+
T Consensus       154 ~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~-~~---~~-~~~~~~a~~v~~~~~~~~  205 (211)
T 1l7m_A          154 IEGINLEDTVAVGDGANDISMFKKAGLKIA-FC---AK-PILKEKADICIEKRDLRE  205 (211)
T ss_dssp             HHTCCGGGEEEEECSGGGHHHHHHCSEEEE-ES---CC-HHHHTTCSEEECSSCGGG
T ss_pred             HcCCCHHHEEEEecChhHHHHHHHCCCEEE-EC---CC-HHHHhhcceeecchhHHH
Confidence            999999999999999999999999999744 42   12 2334578999998  666

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.91  E-value=1.2e-23  Score=172.38  Aligned_cols=196  Identities=14%  Similarity=0.062  Sum_probs=132.3

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHH-HHhcCC-CHHHHHHHhCCC-CchhhhhhHHHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFV-ENIAGK-HNIDIAKILFPD-DLPRGLKFCEDK   95 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~   95 (246)
                      ..++|+|+||+||||++++.     +..+.+.+|.    ......+. ....|. .....+...... .... .      
T Consensus       182 ~~~~k~viFD~DgTLi~~~~-----~~~la~~~g~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~-~------  245 (415)
T 3p96_A          182 RRAKRLIVFDVDSTLVQGEV-----IEMLAAKAGA----EGQVAAITDAAMRGELDFAQSLQQRVATLAGLP-A------  245 (415)
T ss_dssp             TTCCCEEEECTBTTTBSSCH-----HHHHHHHTTC----HHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCB-T------
T ss_pred             ccCCcEEEEcCcccCcCCch-----HHHHHHHcCC----cHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCC-H------
Confidence            46789999999999999873     2444444532    11111111 122222 122222222111 0000 0      


Q ss_pred             HHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEe----------cCCCCCCCC
Q 025896           96 EAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVIL----------GDECERAKP  165 (246)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~----------~~~~~~~kp  165 (246)
                       ..+.. ......++||+.++|+.|++.|++++|+||+....++..++++|+..+|+..+.          .+.....||
T Consensus       246 -~~~~~-~~~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kp  323 (415)
T 3p96_A          246 -TVIDE-VAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAG  323 (415)
T ss_dssp             -HHHHH-HHHHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHH
T ss_pred             -HHHHH-HHHhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcc
Confidence             00111 113468999999999999999999999999999999999999999888765431          224455899


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      ++..|+.+++++|++|+++++|||+.+|+.+++.+|+.+++  .  .. +.....+++++.+.+-..++.++
T Consensus       324 k~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~--~~-~~~~~~ad~~i~~~~l~~ll~~l  390 (415)
T 3p96_A          324 KATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--N--AK-PALREVADASLSHPYLDTVLFLL  390 (415)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--S--CC-HHHHHHCSEEECSSCTTHHHHHT
T ss_pred             hHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--C--CC-HHHHHhCCEEEccCCHHHHHHHh
Confidence            99999999999999999999999999999999999998776  2  22 23334678888755444455444

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.90  E-value=4.7e-23  Score=155.97  Aligned_cols=180  Identities=14%  Similarity=0.063  Sum_probs=117.0

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCC-Cch-------HHHHHHhcCC-CHHHHHHHhCCC-Cchhhh
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVP-ITE-------DFFVENIAGK-HNIDIAKILFPD-DLPRGL   89 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~   89 (246)
                      +++|+|+||+||||++++..+  .+...+...+.    . ...       ..+.....|. ............ ......
T Consensus         2 ~~~k~viFDlDGTL~d~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~   75 (232)
T 3fvv_A            2 TTRRLALFDLDHTLLPLDSDY--QWADFLARTGR----AGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPV   75 (232)
T ss_dssp             CCCEEEEECCBTTTBSSCHHH--HHHHHHHHTTS----SSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHTSCHH
T ss_pred             CCCcEEEEeCCCCCcCCchHH--HHHHHHHHcCC----CCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhcCCCHH
Confidence            457899999999999998653  44555555432    1 111       1111112222 222222211111 000111


Q ss_pred             hhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecC----------C
Q 025896           90 KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGD----------E  159 (246)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~----------~  159 (246)
                      .+......++.....  ..++||+.++|++|+++|++++|+|++....++.+++++|+..+|...+...          .
T Consensus        76 ~~~~~~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~  153 (232)
T 3fvv_A           76 ELAAWHEEFMRDVIR--PSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGT  153 (232)
T ss_dssp             HHHHHHHHHHHHTTG--GGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESS
T ss_pred             HHHHHHHHHHHHhhh--hhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCC
Confidence            111222222222221  2579999999999999999999999999999999999999987665433211          1


Q ss_pred             CCCCCCChHHHHHHHHHcC---CCCCcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          160 CERAKPFPDPYFKALEMLK---VSKDHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~---~~~~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      ...+++++..++.+++++|   ++|++|++|||+.+|+.+++.+|++++..
T Consensus       154 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~  204 (232)
T 3fvv_A          154 PSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN  204 (232)
T ss_dssp             CSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred             CCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence            2234566788899999999   99999999999999999999999887664

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.90  E-value=3.8e-24  Score=153.29  Aligned_cols=119  Identities=13%  Similarity=0.101  Sum_probs=98.0

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEec
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFED  189 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD  189 (246)
                      .|+..++|++|++.|++++++||++...++..++++|+..+|+.         .||++..++.++++++++|+++++|||
T Consensus        38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~---------~kp~~~~~~~~~~~~~~~~~~~~~vGD  108 (162)
T 2p9j_A           38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG---------SYKKLEIYEKIKEKYSLKDEEIGFIGD  108 (162)
T ss_dssp             EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC---------C--CHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred             cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC---------CCCCHHHHHHHHHHcCCCHHHEEEECC
Confidence            45568999999999999999999999999999999999877653         689999999999999999999999999


Q ss_pred             ChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhH-HHHhhhh
Q 025896          190 SVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLW-SALEELD  241 (246)
Q Consensus       190 ~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~-~~l~~~~  241 (246)
                      +.+|+.+|+.+|+.+++. ++  . +.....++++++++.+.++. .+++.+.
T Consensus       109 ~~~Di~~a~~ag~~~~~~-~~--~-~~~~~~a~~v~~~~~~~g~~~~~~~~~~  157 (162)
T 2p9j_A          109 DVVDIEVMKKVGFPVAVR-NA--V-EEVRKVAVYITQRNGGEGALREVAELIH  157 (162)
T ss_dssp             SGGGHHHHHHSSEEEECT-TS--C-HHHHHHCSEECSSCSSSSHHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCeEEec-Cc--c-HHHHhhCCEEecCCCCCcHHHHHHHHHH
Confidence            999999999999987654 22  2 22334689999999997766 4555443

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.89  E-value=7.3e-24  Score=156.67  Aligned_cols=123  Identities=15%  Similarity=0.181  Sum_probs=97.8

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC-CCCCCChHHHHHHHHHcCCCCCc
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC-ERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~-~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      ....++|++.++|+.|++.|++++++|++....++.. +.+|+..+++.+...+.. ...+|.+......++++  ++++
T Consensus        76 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~  152 (201)
T 4ap9_A           76 EKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGF  152 (201)
T ss_dssp             GGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSC
T ss_pred             HhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcCc
Confidence            4578999999999999999999999999988888888 888988776666554432 12455555566777777  8999


Q ss_pred             EEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          184 TFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       184 ~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      +++|||+.||+++++.+|++ +.+..+..       .++++++++.|  +..+++++
T Consensus       153 ~i~iGD~~~Di~~~~~ag~~-v~~~~~~~-------~ad~v~~~~~e--l~~~l~~l  199 (201)
T 4ap9_A          153 ILAMGDGYADAKMFERADMG-IAVGREIP-------GADLLVKDLKE--LVDFIKNL  199 (201)
T ss_dssp             EEEEECTTCCHHHHHHCSEE-EEESSCCT-------TCSEEESSHHH--HHHHHHTC
T ss_pred             EEEEeCCHHHHHHHHhCCce-EEECCCCc-------cccEEEccHHH--HHHHHHHh
Confidence            99999999999999999997 44433322       78999999999  77777665

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.89  E-value=7.3e-24  Score=147.40  Aligned_cols=102  Identities=18%  Similarity=0.226  Sum_probs=95.2

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEec
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFED  189 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD  189 (246)
                      +||+.++|++|++.|++++++||.+...++..++++|+..+|+.++++++.+..||++..|+.++++++++|+++++|||
T Consensus        20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD   99 (137)
T 2pr7_A           20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDD   99 (137)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEES
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcC
Confidence            46788999999999999999999998888889999999999999999988889999999999999999999999999999


Q ss_pred             ChhhhHHHHhcCCCEEEEcCCC
Q 025896          190 SVSGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       190 ~~~Di~~a~~~G~~~i~v~~~~  211 (246)
                      +.+|+.+|+++|+.++++.++.
T Consensus       100 ~~~di~~a~~~G~~~i~~~~~~  121 (137)
T 2pr7_A          100 SILNVRGAVEAGLVGVYYQQFD  121 (137)
T ss_dssp             CHHHHHHHHHHTCEEEECSCHH
T ss_pred             CHHHHHHHHHCCCEEEEeCChH
Confidence            9999999999999999997653

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.89  E-value=5e-25  Score=170.18  Aligned_cols=123  Identities=15%  Similarity=0.168  Sum_probs=98.2

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHH--HHH-HHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPREN--AEL-MISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~--~~~-~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      ..++|++.++|+.|+ .|+++ |+||.+...  ... .+...++..+|+.+++++..+.+||+|..|+.+++++|++|++
T Consensus       125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~  202 (264)
T 1yv9_A          125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQ  202 (264)
T ss_dssp             TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGG
T ss_pred             CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHH
Confidence            457899999999997 88987 889986532  111 1122235566787777777788999999999999999999999


Q ss_pred             EEEEecCh-hhhHHHHhcCCCEEEEcCCCChh-hhhc--cCCcEEecCCCCh
Q 025896          184 TFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEH-VLLE--ANPTFLIKDYDDP  231 (246)
Q Consensus       184 ~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~-~~~~--~~~~~~i~~~~el  231 (246)
                      +++|||++ +|+.+|+.+|+.++++.+|.... ++..  ..|+++++++.|+
T Consensus       203 ~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el  254 (264)
T 1yv9_A          203 VIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW  254 (264)
T ss_dssp             EEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred             EEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHH
Confidence            99999995 99999999999999999985433 3322  2799999999883

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.89  E-value=2.3e-22  Score=160.39  Aligned_cols=131  Identities=17%  Similarity=0.085  Sum_probs=107.8

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEe----------cCCCCCCCCChHHHHHHH
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVIL----------GDECERAKPFPDPYFKAL  174 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~----------~~~~~~~kp~~~~~~~~~  174 (246)
                      ...+++||+.++|+.|++.|++++++||+....++..++++|+..+|+..+.          +++....||++..++.++
T Consensus       175 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~  254 (335)
T 3n28_A          175 ETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLA  254 (335)
T ss_dssp             TTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHH
T ss_pred             HhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHH
Confidence            3578999999999999999999999999999999999999999988876532          234556789999999999


Q ss_pred             HHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          175 EMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       175 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      +++|+++++|++|||+.||+.|++.+|+++++  .   ..+.....+++++...+..+++.+|+..
T Consensus       255 ~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~---~~~~~~~~a~~v~~~~~l~~v~~~L~~~  315 (335)
T 3n28_A          255 QQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--H---AKPKVEAKAQTAVRFAGLGGVVCILSAA  315 (335)
T ss_dssp             HHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--S---CCHHHHTTSSEEESSSCTHHHHHHHHHH
T ss_pred             HHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--C---CCHHHHhhCCEEEecCCHHHHHHHHHhH
Confidence            99999999999999999999999999998776  2   2233345678888655555566666544

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.89  E-value=2.2e-22  Score=147.43  Aligned_cols=105  Identities=12%  Similarity=0.154  Sum_probs=95.0

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAP-RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~-~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      ...++||+.++|++|++.|++++|+||++ ...++..++.+|+..+|+.++..     .+|++..|..++++++++|++|
T Consensus        66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~  140 (187)
T 2wm8_A           66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY-----PGSKITHFERLQQKTGIPFSQM  140 (187)
T ss_dssp             EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEES-----SSCHHHHHHHHHHHHCCCGGGE
T ss_pred             ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEE-----eCchHHHHHHHHHHcCCChHHE
Confidence            56789999999999999999999999998 68999999999999999987543     2577889999999999999999


Q ss_pred             EEEecChhhhHHHHhcCCCEEEEcCCCChhh
Q 025896          185 FVFEDSVSGIKAGVAAGLPVVGLTTRNPEHV  215 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~  215 (246)
                      ++|||+.+|+.+|+.+|+.++++.++.....
T Consensus       141 ~~igD~~~Di~~a~~aG~~~i~v~~g~~~~~  171 (187)
T 2wm8_A          141 IFFDDERRNIVDVSKLGVTCIHIQNGMNLQT  171 (187)
T ss_dssp             EEEESCHHHHHHHHTTTCEEEECSSSCCHHH
T ss_pred             EEEeCCccChHHHHHcCCEEEEECCCCChHH
Confidence            9999999999999999999999998865443

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.88  E-value=4.1e-23  Score=150.32  Aligned_cols=117  Identities=13%  Similarity=0.110  Sum_probs=98.3

Q ss_pred             ccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC
Q 025896          111 SGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDS  190 (246)
Q Consensus       111 ~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~  190 (246)
                      +...++|++|+++|++++++|+.+...++..++++|+..+|+.         .||++..++.++++++++|+++++|||+
T Consensus        38 ~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~  108 (180)
T 1k1e_A           38 VRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG---------KLEKETACFDLMKQAGVTAEQTAYIGDD  108 (180)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES---------CSCHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred             cchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC---------CCCcHHHHHHHHHHcCCCHHHEEEECCC
Confidence            3445799999999999999999999999999999999876642         5899999999999999999999999999


Q ss_pred             hhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhH-HHHhhh
Q 025896          191 VSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLW-SALEEL  240 (246)
Q Consensus       191 ~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~-~~l~~~  240 (246)
                      .||+.+++.+|+.+++.    +..+.....+++++.+..+.++. .+++.+
T Consensus       109 ~~Di~~~~~ag~~~~~~----~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~  155 (180)
T 1k1e_A          109 SVDLPAFAACGTSFAVA----DAPIYVKNAVDHVLSTHGGKGAFREMSDMI  155 (180)
T ss_dssp             GGGHHHHHHSSEEEECT----TSCHHHHTTSSEECSSCTTTTHHHHHHHHH
T ss_pred             HHHHHHHHHcCCeEEeC----CccHHHHhhCCEEecCCCCCcHHHHHHHHH
Confidence            99999999999987754    22333446799999999887776 555443

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.88  E-value=3.4e-23  Score=150.14  Aligned_cols=104  Identities=19%  Similarity=0.294  Sum_probs=91.5

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCC---------------CHHHHHHHHHhcCCCCcceEEEec-----CCCCCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNA---------------PRENAELMISKLGLSDFFQVVILG-----DECERAKP  165 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~---------------~~~~~~~~l~~~~l~~~f~~~~~~-----~~~~~~kp  165 (246)
                      ...++||+.++|++|++.|++++|+||.               ....+...++++|+.  |+.++.+     ++.+..||
T Consensus        40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP  117 (176)
T 2fpr_A           40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKP  117 (176)
T ss_dssp             GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTT
T ss_pred             HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCC
Confidence            4788999999999999999999999998               567788899999987  8888754     67788999


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCC
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~  211 (246)
                      +|.+|+.++++++++|++++||||+.+|+.+|+++|+.++++.++.
T Consensus       118 ~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~  163 (176)
T 2fpr_A          118 KVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  163 (176)
T ss_dssp             SCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             CHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence            9999999999999999999999999999999999999999997774

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.88  E-value=2.3e-24  Score=156.29  Aligned_cols=108  Identities=9%  Similarity=0.044  Sum_probs=89.5

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      +|++|++.|++++|+|+.....++..++++|+. +|..         .||++..++.++++++++++++++|||+.||++
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~~---------~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~  116 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLHG---------IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLP  116 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEES---------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEeC---------CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHH
Confidence            899999999999999999999999999999987 4432         389999999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      +++.+|+.+++.   + ..+.....+++++.+..+-+.+..+
T Consensus       117 ~~~~ag~~v~~~---~-~~~~~~~~ad~v~~~~~~~g~~~~l  154 (176)
T 3mmz_A          117 CFALVGWPVAVA---S-AHDVVRGAARAVTTVPGGDGAIREI  154 (176)
T ss_dssp             HHHHSSEEEECT---T-CCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred             HHHHCCCeEECC---C-hhHHHHHhCCEEecCCCCCcHHHHH
Confidence            999999765543   2 2223345689999997766544443

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.88  E-value=5.5e-24  Score=157.29  Aligned_cols=180  Identities=18%  Similarity=0.134  Sum_probs=129.4

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFR  100 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (246)
                      ++|+|+||+||||+|+...+..++.++++.++     ..+.+.    +.+.+....+..+.   .....    .....|.
T Consensus         3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~---~~~~~----~~~~~~~   66 (197)
T 1q92_A            3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQP-----FIALED----RRGFWVSEQYGRLR---PGLSE----KAISIWE   66 (197)
T ss_dssp             CCEEEEECSBTTTBCHHHHHHHHHHHHCTTSC-----CCCGGG----CCSSCHHHHHHHHS---TTHHH----HHHHHHT
T ss_pred             CceEEEEeCCCCCccCcHHHHHHHHHHHhcCC-----CCCHHH----hcCCcHHHHHHhcC---HHHHH----HHHHHHH
Confidence            56899999999999999988888888887662     122222    12333333333321   11111    1222332


Q ss_pred             HH-hhccCCCcccHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCCCC-cceEEEecCCCCCCCCChHHHHHHHHHc
Q 025896          101 KL-ASEQLKPISGLDKVKKWIEDR-GLKRAAVTNAPRENAELMISKLGLSD-FFQVVILGDECERAKPFPDPYFKALEML  177 (246)
Q Consensus       101 ~~-~~~~~~~~~~~~~~l~~l~~~-g~~i~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~  177 (246)
                      .. ......++||+.++|+.|++. |++++|+||++...++..++++|+.. +|+                  ..+++++
T Consensus        67 ~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~------------------~~~~~~l  128 (197)
T 1q92_A           67 SKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG------------------PDFLEQI  128 (197)
T ss_dssp             STTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC------------------GGGGGGE
T ss_pred             hhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch------------------HHHHHHh
Confidence            21 223578999999999999999 99999999998888888888888877 775                  4578889


Q ss_pred             CCCCCcEEEEecChhh----hHHHH-hcCCCEEEEcCCCChhhhhccCC-cEEecCCC-ChhhHHHHh
Q 025896          178 KVSKDHTFVFEDSVSG----IKAGV-AAGLPVVGLTTRNPEHVLLEANP-TFLIKDYD-DPKLWSALE  238 (246)
Q Consensus       178 ~~~~~~~~~igD~~~D----i~~a~-~~G~~~i~v~~~~~~~~~~~~~~-~~~i~~~~-el~~~~~l~  238 (246)
                      +++|+++++|||+..|    +.+|+ ++|+.++++.++++....  ..+ ..+++++. +  +..++.
T Consensus       129 ~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~--~~~~~~~v~~~~~~--l~~~l~  192 (197)
T 1q92_A          129 VLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQ--LQPPRRRLHSWADD--WKAILD  192 (197)
T ss_dssp             EECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCC--CCTTCEEECCTTSC--HHHHHH
T ss_pred             ccCCccEEEECcccccCCchhhhcccCCCceEEEecCccccccc--ccccchhhhhHHHH--HHHHhc
Confidence            9999999999999998    99999 999999999887654321  233 45899995 6  445554

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.88  E-value=1.6e-24  Score=159.65  Aligned_cols=174  Identities=16%  Similarity=0.161  Sum_probs=124.1

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHHH
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRK  101 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (246)
                      .|+|+||+||||+|+...+..++..+++  |++   ..+.+.+...    .....+..+..       .....+...|.+
T Consensus         2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~---~~~~~~~~~~----~~~~~~~~~~~-------~~~~~~~~~~~~   65 (193)
T 2i7d_A            2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEP---HVPLEQRRGF----LAREQYRALRP-------DLADKVASVYEA   65 (193)
T ss_dssp             CEEEEECSBTTTBCHHHHHHHHHHHHST--TSC---CCCGGGCCSS----CHHHHHHHHCT-------THHHHHHHHHTS
T ss_pred             CcEEEEECCCcCccchhHHHHHHHHHhc--CCC---CCCHHHHHHh----hHHHHHHHHhH-------HHHHHHHHHHHh
Confidence            4799999999999999988888888776  442   1222221111    11222333322       122333334433


Q ss_pred             H-hhccCCCcccHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          102 L-ASEQLKPISGLDKVKKWIEDR-GLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       102 ~-~~~~~~~~~~~~~~l~~l~~~-g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      . ......++||+.++|++|++. |++++|+||++...++..++++|+   |+.++++              .+++++++
T Consensus        66 ~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~--------------~~~~~~~~  128 (193)
T 2i7d_A           66 PGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGP--------------QFVERIIL  128 (193)
T ss_dssp             TTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCH--------------HHHTTEEE
T ss_pred             cCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCH--------------HHHHHcCC
Confidence            2 223578999999999999999 999999999998888888888887   7766543              27889999


Q ss_pred             CCCcEEEEecChhh----hHHHH-hcCCCEEEEcCCCChhhhhccCCcE-EecCCCC
Q 025896          180 SKDHTFVFEDSVSG----IKAGV-AAGLPVVGLTTRNPEHVLLEANPTF-LIKDYDD  230 (246)
Q Consensus       180 ~~~~~~~igD~~~D----i~~a~-~~G~~~i~v~~~~~~~~~~~~~~~~-~i~~~~e  230 (246)
                      +|++|++|||+.+|    +.+|+ .+|+.++++.++++....  ..+.+ +++++.+
T Consensus       129 ~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~--~~~~~~~v~~~~~  183 (193)
T 2i7d_A          129 TRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLV--LPPTRRRLLSWSD  183 (193)
T ss_dssp             CSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCC--CCTTSCEECSTTS
T ss_pred             CcccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccc--cccchHHHhhHHH
Confidence            99999999999988    99999 999999999876543321  12344 7999944

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.87  E-value=2.7e-23  Score=162.33  Aligned_cols=116  Identities=15%  Similarity=0.171  Sum_probs=93.6

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ...++||+.++|+.|++.|++++|+||.+...++..++.+|+..+|+.++         |.  ....++++++.. ++|+
T Consensus       161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~---------~~--~K~~~~~~l~~~-~~~~  228 (287)
T 3a1c_A          161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL---------PH--QKSEEVKKLQAK-EVVA  228 (287)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC---------TT--CHHHHHHHHTTT-CCEE
T ss_pred             ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecC---------hH--HHHHHHHHHhcC-CeEE
Confidence            45789999999999999999999999999999999999999988887553         11  236788899999 9999


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEe--cCCCChhhHHHHhh
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLI--KDYDDPKLWSALEE  239 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~~~l~~  239 (246)
                      +|||+.+|+.+|+.+|+. +.+..+   .+.....+++++  +++.+  +..+++.
T Consensus       229 ~vGDs~~Di~~a~~ag~~-v~~~~~---~~~~~~~ad~v~~~~~~~~--l~~~l~~  278 (287)
T 3a1c_A          229 FVGDGINDAPALAQADLG-IAVGSG---SDVAVESGDIVLIRDDLRD--VVAAIQL  278 (287)
T ss_dssp             EEECTTTCHHHHHHSSEE-EEECCC---SCCSSCCSSEEESSSCTHH--HHHHHHT
T ss_pred             EEECCHHHHHHHHHCCee-EEeCCC---CHHHHhhCCEEEeCCCHHH--HHHHHHH
Confidence            999999999999999997 444322   122345789999  78877  5555544

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.87  E-value=2.9e-23  Score=160.48  Aligned_cols=127  Identities=11%  Similarity=0.089  Sum_probs=84.4

Q ss_pred             cccHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCCCCcce---EEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          110 ISGLDKVKKWIEDR-GLKRAAVTNAPRENAELMISKLGLSDFFQ---VVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       110 ~~~~~~~l~~l~~~-g~~i~i~s~~~~~~~~~~l~~~~l~~~f~---~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ++++.+.++.+++. |+++ ++++.........+...++..+|+   .....+....+||++.+++.+++++|+++++|+
T Consensus       133 ~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i  211 (271)
T 2x4d_A          133 YQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAV  211 (271)
T ss_dssp             HHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             HHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEE
Confidence            34555666666665 5665 444443211111111112112221   122334456789999999999999999999999


Q ss_pred             EEecCh-hhhHHHHhcCCCEEEEcCCC-Chhhhh--ccCCcEEecCCCChhhHHHHhh
Q 025896          186 VFEDSV-SGIKAGVAAGLPVVGLTTRN-PEHVLL--EANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       186 ~igD~~-~Di~~a~~~G~~~i~v~~~~-~~~~~~--~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      +|||+. ||+.||+.+|+.++++.++. ...+..  ...|+++++++.|  +..++.+
T Consensus       212 ~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~e--l~~~l~~  267 (271)
T 2x4d_A          212 MIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAE--AVDLLLQ  267 (271)
T ss_dssp             EEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHH--HHHHHHH
T ss_pred             EECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHH--HHHHHHh
Confidence            999998 99999999999999999883 333222  2569999999999  5555544

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.87  E-value=5e-24  Score=152.94  Aligned_cols=112  Identities=13%  Similarity=0.135  Sum_probs=94.6

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      +|++|++.|++++++||.+...++..++++|+..+|+.         .||++..++.++++++++|+++++|||+.+|+.
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~---------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~  109 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG---------VVDKLSAAEELCNELGINLEQVAYIGDDLNDAK  109 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS---------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHH
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc---------cCChHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence            79999999999999999999999999999999876654         389999999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChh-hHHHHhhh
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPK-LWSALEEL  240 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~-~~~~l~~~  240 (246)
                      +++.+|+.+++.+    ..+.....+++++.+....+ +..+++.+
T Consensus       110 ~~~~ag~~~~~~~----~~~~~~~~ad~v~~~~~~~g~~~e~~~~l  151 (164)
T 3e8m_A          110 LLKRVGIAGVPAS----APFYIRRLSTIFLEKRGGEGVFREFVEKV  151 (164)
T ss_dssp             HHTTSSEEECCTT----SCHHHHTTCSSCCCCCTTTTHHHHHHHHH
T ss_pred             HHHHCCCeEEcCC----hHHHHHHhCcEEeccCCCCcHHHHHHHHH
Confidence            9999998766542    22334457899999877666 55555554

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.87  E-value=4.6e-23  Score=151.16  Aligned_cols=104  Identities=14%  Similarity=0.119  Sum_probs=88.9

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      +|++|++.|++++|+|+.....++..++++|+..+|+.+         ++++..++.+++++|++++++++|||+.||+.
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~  124 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR---------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLP  124 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC---------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc---------CChHHHHHHHHHHcCCChhHEEEECCCHHHHH
Confidence            899999999999999999999999999999998877753         66779999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChh
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPK  232 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~  232 (246)
                      +++.+|+.+++.   + ..+.....+++++.+..+-+
T Consensus       125 ~~~~ag~~~~~~---~-~~~~~~~~ad~v~~~~~~~G  157 (189)
T 3mn1_A          125 VIRRVGLGMAVA---N-AASFVREHAHGITRAQGGEG  157 (189)
T ss_dssp             HHHHSSEEEECT---T-SCHHHHHTSSEECSSCTTTT
T ss_pred             HHHHCCCeEEeC---C-ccHHHHHhCCEEecCCCCCc
Confidence            999999875543   2 22333457899999876655

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.87  E-value=2.9e-24  Score=166.51  Aligned_cols=126  Identities=17%  Similarity=0.150  Sum_probs=96.8

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHH---HHHhcCCCCcceEEEecCC-CCCCCCChHHHHHHHHHcCCCCCc
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAEL---MISKLGLSDFFQVVILGDE-CERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~---~l~~~~l~~~f~~~~~~~~-~~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      .+++++.++++.+ ..|+++ ++||.+......   .+...++..+|+.+++.+. ...+||++.+++.+++++|++|++
T Consensus       137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e  214 (271)
T 1vjr_A          137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKER  214 (271)
T ss_dssp             CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGG
T ss_pred             cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCce
Confidence            4678899999999 778887 888875432111   1122234455666666677 788999999999999999999999


Q ss_pred             EEEEecCh-hhhHHHHhcCCCEEEEcCCCCh-hhhhc--cCCcEEecCCCChhhHHHH
Q 025896          184 TFVFEDSV-SGIKAGVAAGLPVVGLTTRNPE-HVLLE--ANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       184 ~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~-~~~~~--~~~~~~i~~~~el~~~~~l  237 (246)
                      +++|||++ ||++||+.+|+.++++.++... .+...  ..|+++++++.|  +..++
T Consensus       215 ~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~e--l~~~l  270 (271)
T 1vjr_A          215 MAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGE--LAKAV  270 (271)
T ss_dssp             EEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHH--HHHHH
T ss_pred             EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHH--HHHHh
Confidence            99999995 9999999999999999998543 33332  379999999988  44443

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.87  E-value=3.9e-24  Score=168.63  Aligned_cols=130  Identities=16%  Similarity=0.153  Sum_probs=103.1

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHH--H-HHHHhcC-CCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENA--E-LMISKLG-LSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKD  182 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~--~-~~l~~~~-l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~  182 (246)
                      ..++|++.++++.|++.|+ ++++||.+....  . ..+..+| +..+|+.+++++....+||++.+|+.+++++|++|+
T Consensus       155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~  233 (306)
T 2oyc_A          155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPA  233 (306)
T ss_dssp             TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGG
T ss_pred             CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChH
Confidence            3467899999999999998 999999875433  1 2233334 556677777777778899999999999999999999


Q ss_pred             cEEEEecCh-hhhHHHHhcCCCEEEEcCCCCh-hhhh--------ccCCcEEecCCCChhhHHHHhh
Q 025896          183 HTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPE-HVLL--------EANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       183 ~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~-~~~~--------~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      ++++|||++ +|+.+|+.+|+.++++.+|... .+..        ...|+++++++.|  +..++++
T Consensus       234 e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~e--l~~~l~~  298 (306)
T 2oyc_A          234 RTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIAD--LTEGLED  298 (306)
T ss_dssp             GEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGG--GGGGC--
T ss_pred             HEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHH--HHHHHHh
Confidence            999999997 9999999999999999998543 3322        2579999999999  5555544

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.87  E-value=1.7e-22  Score=150.17  Aligned_cols=104  Identities=15%  Similarity=0.156  Sum_probs=90.3

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      +|++|++.|++++|+|+.....++..++++|+..+|+.+         +|++..++.+++++|+++++|++|||+.||++
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~---------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~  154 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQ---------SDKLVAYHELLATLQCQPEQVAYIGDDLIDWP  154 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSC---------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhccc---------CChHHHHHHHHHHcCcCcceEEEEcCCHHHHH
Confidence            899999999999999999999999999999998777643         78899999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChh
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPK  232 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~  232 (246)
                      +++.+|+.++..+    ..+.....+++++.+..+.+
T Consensus       155 ~~~~ag~~~a~~~----~~~~~~~~Ad~v~~~~~~~G  187 (211)
T 3ij5_A          155 VMAQVGLSVAVAD----AHPLLLPKAHYVTRIKGGRG  187 (211)
T ss_dssp             HHTTSSEEEECTT----SCTTTGGGSSEECSSCTTTT
T ss_pred             HHHHCCCEEEeCC----ccHHHHhhCCEEEeCCCCCc
Confidence            9999998765542    23334457899999987655

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.87  E-value=8.5e-23  Score=152.11  Aligned_cols=100  Identities=17%  Similarity=0.111  Sum_probs=80.3

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecC---CCCCCCCChHHHHHHHHHcCCCCCc
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGD---ECERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      ..+++++.++|++|+++|++++|+||.+....+..++.  +.++|+.++.+.   .....||+|+.+..+++++++    
T Consensus        87 ~~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----  160 (211)
T 2b82_A           87 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----  160 (211)
T ss_dssp             CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----
T ss_pred             CCCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----
Confidence            34578999999999999999999999976554444444  334555543221   234589999999999999998    


Q ss_pred             EEEEecChhhhHHHHhcCCCEEEEcCCCC
Q 025896          184 TFVFEDSVSGIKAGVAAGLPVVGLTTRNP  212 (246)
Q Consensus       184 ~~~igD~~~Di~~a~~~G~~~i~v~~~~~  212 (246)
                      |+||||+.+|+.+|+++|+.++++.++..
T Consensus       161 ~l~VGDs~~Di~aA~~aG~~~i~v~~g~~  189 (211)
T 2b82_A          161 RIFYGDSDNDITAARDVGARGIRILRASN  189 (211)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred             EEEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence            99999999999999999999999998753

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.86  E-value=9.1e-22  Score=157.83  Aligned_cols=130  Identities=22%  Similarity=0.364  Sum_probs=114.6

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcce--EEEecCCCC-----------CCCCChHHHHHH
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQ--VVILGDECE-----------RAKPFPDPYFKA  173 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~-----------~~kp~~~~~~~~  173 (246)
                      ..++||+.++|+.|+++|++++|+||++...++..++++|+.++|+  .++++++..           .+||+|+.|..+
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a  293 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA  293 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHH
Confidence            4678999999999999999999999999999999999999999999  788877654           489999999999


Q ss_pred             HHHcC--------------CCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC----hhhhhccCCcEEecCCCChhhHH
Q 025896          174 LEMLK--------------VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP----EHVLLEANPTFLIKDYDDPKLWS  235 (246)
Q Consensus       174 ~~~~~--------------~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~----~~~~~~~~~~~~i~~~~el~~~~  235 (246)
                      +++++              ++|++|++|||+.+|+.+|+++|+.++++.++..    ..+.....|+++++++.|  +..
T Consensus       294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~e--L~~  371 (384)
T 1qyi_A          294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGE--LRG  371 (384)
T ss_dssp             HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGG--HHH
T ss_pred             HHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHH--HHH
Confidence            99999              8999999999999999999999999999998853    233444589999999999  555


Q ss_pred             HHh
Q 025896          236 ALE  238 (246)
Q Consensus       236 ~l~  238 (246)
                      +++
T Consensus       372 ~l~  374 (384)
T 1qyi_A          372 VLD  374 (384)
T ss_dssp             HHS
T ss_pred             HHH
Confidence            543

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.86  E-value=8.9e-24  Score=163.09  Aligned_cols=127  Identities=15%  Similarity=0.093  Sum_probs=100.6

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHH--HHHHHh-cCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENA--ELMISK-LGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~--~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      ..++|++.++++.|+ .|+++ ++||.+....  ...+.. .++..+|+.+++++....+||+|.+|+.++++  ++|++
T Consensus       129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~  204 (263)
T 1zjj_A          129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEE  204 (263)
T ss_dssp             TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCE
T ss_pred             CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCccc
Confidence            356899999999999 88998 9999876433  222222 34556778888788778899999999999999  99999


Q ss_pred             EEEEecCh-hhhHHHHhcCCCEEEEcCCCCh-hhhhc--cCCcEEecCCCChhhHHHHhh
Q 025896          184 TFVFEDSV-SGIKAGVAAGLPVVGLTTRNPE-HVLLE--ANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       184 ~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~-~~~~~--~~~~~~i~~~~el~~~~~l~~  239 (246)
                      ++||||++ +|+.+|+.+|+.++++.+|... .+...  ..|+++++++.|  +..++++
T Consensus       205 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~e--l~~~l~~  262 (263)
T 1zjj_A          205 LWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYE--LIDYLKT  262 (263)
T ss_dssp             EEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGG--GGGGGC-
T ss_pred             EEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHH--HHHHHhh
Confidence            99999996 9999999999999999988543 33332  279999999999  5555543

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.86  E-value=8e-23  Score=150.04  Aligned_cols=107  Identities=13%  Similarity=0.114  Sum_probs=91.1

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      .|++|++.|++++++||.+...++..++.+|+..+|+.+         ||++..++.++++++++++++++|||+.||+.
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~  124 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ---------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLP  124 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC---------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC---------CChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence            588999999999999999999999999999998776643         89999999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHH
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWS  235 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~  235 (246)
                      +++.+|+.+++.    +..+.....+++++.+..+.+.+.
T Consensus       125 ~~~~ag~~~~~~----~~~~~~~~~ad~v~~~~~~~g~~~  160 (191)
T 3n1u_A          125 LIQQVGLGVAVS----NAVPQVLEFADWRTERTGGRGAVR  160 (191)
T ss_dssp             HHHHSSEEEECT----TCCHHHHHHSSEECSSCTTTTHHH
T ss_pred             HHHHCCCEEEeC----CccHHHHHhCCEEecCCCCCcHHH
Confidence            999999886432    222344457899999988766444

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.85  E-value=3.1e-22  Score=147.01  Aligned_cols=105  Identities=17%  Similarity=0.167  Sum_probs=89.9

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      .|+.|++.|++++|+||.....++..++++|+..+|+.         .||++..++.++++++++++++++|||+.||++
T Consensus        60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~  130 (195)
T 3n07_A           60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQG---------QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDWP  130 (195)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECS---------CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGHH
T ss_pred             HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeC---------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHH
Confidence            48899999999999999999999999999999876653         389999999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhh
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKL  233 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~  233 (246)
                      +++.+|+.+++.    +..+.....+++++.+..+-+.
T Consensus       131 ~~~~ag~~va~~----na~~~~~~~ad~v~~~~~~~G~  164 (195)
T 3n07_A          131 VMEKVALRVCVA----DGHPLLAQRANYVTHIKGGHGA  164 (195)
T ss_dssp             HHTTSSEEEECT----TSCHHHHHHCSEECSSCTTTTH
T ss_pred             HHHHCCCEEEEC----ChHHHHHHhCCEEEcCCCCCCH
Confidence            999999876543    2333445578999998877663

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.85  E-value=2.3e-22  Score=156.35  Aligned_cols=114  Identities=17%  Similarity=0.174  Sum_probs=86.0

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF  187 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i  187 (246)
                      .++||+.++|+.|++.|++++++|+.....++..++++|+..+|+.++..+       +....+...+.+     ++++|
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~-------k~~~~k~~~~~~-----~~~~v  211 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHE-------KAEKVKEVQQKY-----VTAMV  211 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGG-------HHHHHHHHHTTS-----CEEEE
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHH-------HHHHHHHHHhcC-----CEEEE
Confidence            688999999999999999999999999999999999999999888776543       223333343333     78999


Q ss_pred             ecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEe--cCCCChhhHHHHhh
Q 025896          188 EDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLI--KDYDDPKLWSALEE  239 (246)
Q Consensus       188 gD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~~~l~~  239 (246)
                      ||+.||++|++.+|+.++   .++... .....+++++  +++.+  +..+++.
T Consensus       212 GD~~nDi~~~~~Ag~~va---~~~~~~-~~~~~a~~~~~~~~~~~--l~~~l~~  259 (280)
T 3skx_A          212 GDGVNDAPALAQADVGIA---IGAGTD-VAVETADIVLVRNDPRD--VAAIVEL  259 (280)
T ss_dssp             ECTTTTHHHHHHSSEEEE---CSCCSS-SCCCSSSEECSSCCTHH--HHHHHHH
T ss_pred             eCCchhHHHHHhCCceEE---ecCCcH-HHHhhCCEEEeCCCHHH--HHHHHHH
Confidence            999999999999996433   343222 2334677887  55655  6666543

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.76  E-value=4.9e-23  Score=158.68  Aligned_cols=112  Identities=15%  Similarity=0.236  Sum_probs=94.7

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      ....++||+.++|++|++.|++++++||.+...++..++++|+.++|+.++           |..+..++++++.++++|
T Consensus       133 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~-----------p~~k~~~~~~l~~~~~~~  201 (263)
T 2yj3_A          133 ISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLS-----------PEDKVRIIEKLKQNGNKV  201 (263)
Confidence            356799999999999999999999999999999999999999999888765           334577899999999999


Q ss_pred             EEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEe--cCCCCh
Q 025896          185 FVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLI--KDYDDP  231 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el  231 (246)
                      +||||+.||+.+++.+|+.+.+.   + ..+.....+++++  +++.++
T Consensus       202 ~~VGD~~~D~~aa~~Agv~va~g---~-~~~~~~~~ad~v~~~~~l~~l  246 (263)
T 2yj3_A          202 LMIGDGVNDAAALALADVSVAMG---N-GVDISKNVADIILVSNDIGTL  246 (263)
Confidence            99999999999999999765543   2 2233445789999  899983

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.85  E-value=6.8e-23  Score=160.27  Aligned_cols=131  Identities=12%  Similarity=0.045  Sum_probs=104.9

Q ss_pred             CCcccHHHHHHHHHHc-CCeEEEEeCC---------------------CHHHHHHHHHhcCCCCcceEE----------E
Q 025896          108 KPISGLDKVKKWIEDR-GLKRAAVTNA---------------------PRENAELMISKLGLSDFFQVV----------I  155 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~-g~~i~i~s~~---------------------~~~~~~~~l~~~~l~~~f~~~----------~  155 (246)
                      .+++++.++++.+++. |+++.+.|+.                     ....+...++.+|+..+|...          +
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~  201 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY  201 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence            6788999999999988 9999998876                     455677778888887666554          4


Q ss_pred             ecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHH
Q 025896          156 LGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWS  235 (246)
Q Consensus       156 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~  235 (246)
                      ..+.....++++..++.+++++|+++++|++|||+.||+.+++.+|+.+++   ++...+ ....+++++.+..+-++..
T Consensus       202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~---~~~~~~-~~~~a~~v~~~~~~~gv~~  277 (289)
T 3gyg_A          202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL---KNATQE-AKNLHNLITDSEYSKGITN  277 (289)
T ss_dssp             EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC---TTCCHH-HHHHCCCBCSSCHHHHHHH
T ss_pred             EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE---CCccHH-HHHhCCEEcCCCCcCHHHH
Confidence            455567789999999999999999999999999999999999999965443   333333 3346889999999988888


Q ss_pred             HHhhhhc
Q 025896          236 ALEELDK  242 (246)
Q Consensus       236 ~l~~~~~  242 (246)
                      .++++-.
T Consensus       278 ~~~~~~~  284 (289)
T 3gyg_A          278 TLKKLIG  284 (289)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHHH
Confidence            8877543

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.85  E-value=6.8e-22  Score=152.59  Aligned_cols=81  Identities=19%  Similarity=0.270  Sum_probs=67.6

Q ss_pred             ceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC-hhhhHHHHhcCCCEEEEcCCCChhh-hhcc--CCcEEec
Q 025896          151 FQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDS-VSGIKAGVAAGLPVVGLTTRNPEHV-LLEA--NPTFLIK  226 (246)
Q Consensus       151 f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~-~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~--~~~~~i~  226 (246)
                      |+.++..+....+||++..++.+++++|++++++++|||+ .+|+.+|+.+|+.++++.+|....+ ....  .|+++++
T Consensus       169 ~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~  248 (264)
T 3epr_A          169 LEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLA  248 (264)
T ss_dssp             HHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEES
T ss_pred             HHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEEC
Confidence            3334445566789999999999999999999999999999 5999999999999999999854433 3322  7999999


Q ss_pred             CCCCh
Q 025896          227 DYDDP  231 (246)
Q Consensus       227 ~~~el  231 (246)
                      ++.|+
T Consensus       249 ~l~~l  253 (264)
T 3epr_A          249 SLDEW  253 (264)
T ss_dssp             CGGGC
T ss_pred             CHHHH
Confidence            99984

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.85  E-value=4.3e-23  Score=160.98  Aligned_cols=119  Identities=20%  Similarity=0.245  Sum_probs=99.1

Q ss_pred             cHHHHHHHHHHcCCeEEEEeCCCHHHH--H--HHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHc----CCCCCc
Q 025896          112 GLDKVKKWIEDRGLKRAAVTNAPRENA--E--LMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEML----KVSKDH  183 (246)
Q Consensus       112 ~~~~~l~~l~~~g~~i~i~s~~~~~~~--~--~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~----~~~~~~  183 (246)
                      ....+++.|+++|++ +|+||.+....  .  ..+...++..+|+.+++++....+||+|.+|+.+++++    |++|++
T Consensus       149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~  227 (284)
T 2hx1_A          149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKRE  227 (284)
T ss_dssp             HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGG
T ss_pred             cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcce
Confidence            667777789999999 99999976544  2  12345567788998888888889999999999999999    999999


Q ss_pred             EEEEecCh-hhhHHHHhcCCCEEEEcCCCCh-hhhh----c--cCCcEEecCCCCh
Q 025896          184 TFVFEDSV-SGIKAGVAAGLPVVGLTTRNPE-HVLL----E--ANPTFLIKDYDDP  231 (246)
Q Consensus       184 ~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~-~~~~----~--~~~~~~i~~~~el  231 (246)
                      ++||||++ +|+.+|+++|+.++++.++... .+..    .  ..|+++++++.|+
T Consensus       228 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el  283 (284)
T 2hx1_A          228 ILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE  283 (284)
T ss_dssp             EEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred             EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence            99999996 9999999999999999998543 3322    1  5799999999984

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.84  E-value=1.6e-21  Score=150.63  Aligned_cols=81  Identities=20%  Similarity=0.199  Sum_probs=65.6

Q ss_pred             ceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC-hhhhHHHHhcCCCEEEEcCCCChhhhhcc---CCcEEec
Q 025896          151 FQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDS-VSGIKAGVAAGLPVVGLTTRNPEHVLLEA---NPTFLIK  226 (246)
Q Consensus       151 f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~-~~Di~~a~~~G~~~i~v~~~~~~~~~~~~---~~~~~i~  226 (246)
                      |+.++..+....+||++..++.+++++|++++++++|||+ .||+.||+.+|+.++++.+|....+....   .|+++++
T Consensus       170 ~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~  249 (266)
T 3pdw_A          170 LTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAID  249 (266)
T ss_dssp             HHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEES
T ss_pred             HHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeC
Confidence            3444445566789999999999999999999999999999 69999999999999999998655444433   6999999


Q ss_pred             CCCCh
Q 025896          227 DYDDP  231 (246)
Q Consensus       227 ~~~el  231 (246)
                      ++.|+
T Consensus       250 ~~~el  254 (266)
T 3pdw_A          250 SLTEW  254 (266)
T ss_dssp             SGGGG
T ss_pred             CHHHH
Confidence            99993

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.83  E-value=2.2e-20  Score=136.77  Aligned_cols=112  Identities=14%  Similarity=0.113  Sum_probs=93.5

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      +|++|++.|++++|+||.+....+..++++|+..+|+         ..||++..++.+++++|++++++++|||+.+|+.
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~---------~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~  131 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQ---------GQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWP  131 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEEC---------SCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHH
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeec---------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence            8999999999999999999999999999999876654         2589999999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhH-HHHhhh
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLW-SALEEL  240 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~-~~l~~~  240 (246)
                      +++.+|+.+++.. +  . +.....+++++++..+.+.. .+++.+
T Consensus       132 ~a~~ag~~~~~~~-~--~-~~~~~~ad~v~~~~~~~g~~~~~l~~l  173 (188)
T 2r8e_A          132 VMEKVGLSVAVAD-A--H-PLLIPRADYVTRIAGGRGAVREVCDLL  173 (188)
T ss_dssp             HHTTSSEEEECTT-S--C-TTTGGGSSEECSSCTTTTHHHHHHHHH
T ss_pred             HHHHCCCEEEecC-c--C-HHHHhcCCEEEeCCCCCcHHHHHHHHH
Confidence            9999999876542 2  2 22234689999999776665 555544

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.83  E-value=8e-22  Score=153.38  Aligned_cols=89  Identities=11%  Similarity=0.113  Sum_probs=69.8

Q ss_pred             cceEEEec----CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEe
Q 025896          150 FFQVVILG----DECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLI  225 (246)
Q Consensus       150 ~f~~~~~~----~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i  225 (246)
                      .+..+.+.    +....+++++.+++.+++++|++++++++|||+.||++|++.+|++   +..++..++.. ..|++++
T Consensus       178 ~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~---vam~na~~~~k-~~A~~v~  253 (279)
T 4dw8_A          178 KINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMG---VAMGNAQEPVK-KAADYIT  253 (279)
T ss_dssp             TCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE---EECTTSCHHHH-HHCSEEC
T ss_pred             CEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcE---EEcCCCcHHHH-HhCCEEc
Confidence            35544443    3335677889999999999999999999999999999999999954   44455444443 5689999


Q ss_pred             cCCCChhhHHHHhhhhc
Q 025896          226 KDYDDPKLWSALEELDK  242 (246)
Q Consensus       226 ~~~~el~~~~~l~~~~~  242 (246)
                      .+..+-++...++++..
T Consensus       254 ~~~~e~Gv~~~i~~~~~  270 (279)
T 4dw8_A          254 LTNDEDGVAEAIERIFN  270 (279)
T ss_dssp             CCGGGTHHHHHHHHHC-
T ss_pred             CCCCCcHHHHHHHHHHh
Confidence            99999999999887654

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.82  E-value=9.3e-22  Score=153.86  Aligned_cols=78  Identities=13%  Similarity=0.076  Sum_probs=65.2

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhh
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      ...+.+++.+++.+++++|++++++++|||+.||++|++.+|+.+++   ++.. +.....|++++.+..+-++...+++
T Consensus       197 ~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam---~na~-~~~k~~Ad~v~~s~~edGv~~~i~~  272 (290)
T 3dnp_A          197 VPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM---GNAV-PEIKRKADWVTRSNDEQGVAYMMKE  272 (290)
T ss_dssp             EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSC-HHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe---cCCc-HHHHHhcCEECCCCCccHHHHHHHH
Confidence            35677889999999999999999999999999999999999975554   3333 4445678999999999998888877


Q ss_pred             hh
Q 025896          240 LD  241 (246)
Q Consensus       240 ~~  241 (246)
                      +-
T Consensus       273 ~~  274 (290)
T 3dnp_A          273 YF  274 (290)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.82  E-value=1.9e-19  Score=130.89  Aligned_cols=168  Identities=14%  Similarity=0.166  Sum_probs=109.8

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHH-
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFR-  100 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  100 (246)
                      .|+|+||+||||+|+...+..++.+   .+|.    ..+.+.+    .|.+....+    ....   ..    ....+. 
T Consensus         4 ~~~viFD~DGtL~Ds~~~~~~~~~~---~~g~----~~~~~~~----~g~~~~~~~----~~~~---~~----~~~~~~~   61 (180)
T 3bwv_A            4 RQRIAIDMDEVLADTLGAVVKAVNE---RADL----NIKMESL----NGKKLKHMI----PEHE---GL----VMDILKE   61 (180)
T ss_dssp             CCEEEEETBTTTBCHHHHHHHHHHH---HSCC----CCCGGGC----TTCCC---------------CH----HHHHHHS
T ss_pred             ccEEEEeCCCcccccHHHHHHHHHH---HhCC----CCCHHHH----cCccHHHHC----CchH---HH----HHHHHhC
Confidence            4899999999999999887777765   5543    3333332    133322211    1100   01    112211 


Q ss_pred             HHhhccCCCcccHHHHHHHHHHcCCeEEEEeCC---CH--HHHHHHHHh-cCCCCcceEEEecCCCCCCCCChHHHHHHH
Q 025896          101 KLASEQLKPISGLDKVKKWIEDRGLKRAAVTNA---PR--ENAELMISK-LGLSDFFQVVILGDECERAKPFPDPYFKAL  174 (246)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~---~~--~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~  174 (246)
                      .......+++||+.++|++|++. ++++|+||.   ..  ......+.. ++...+|+.+++++..              
T Consensus        62 ~~~~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~--------------  126 (180)
T 3bwv_A           62 PGFFRNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN--------------  126 (180)
T ss_dssp             TTGGGSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG--------------
T ss_pred             cchhccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC--------------
Confidence            12233578999999999999985 999999998   32  222444554 6777778888877641              


Q ss_pred             HHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          175 EMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       175 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                       .+    ++|++|||+.+++.  ..+| .++++.++++..    ..++++++++.|  +..++.++
T Consensus       127 -~l----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~----~~~~~~i~~~~e--l~~~l~~~  178 (180)
T 3bwv_A          127 -II----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY----EHRFERVSGWRD--VKNYFNSI  178 (180)
T ss_dssp             -GB----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT----CCSSEEECSHHH--HHHHHHHH
T ss_pred             -ee----cccEEecCCcchHH--HhCC-CeEEeCCCcccC----CCCceecCCHHH--HHHHHHHh
Confidence             11    77999999999985  5589 999998664322    468899999999  56666554

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.82  E-value=7.7e-22  Score=153.01  Aligned_cols=103  Identities=15%  Similarity=0.097  Sum_probs=77.0

Q ss_pred             CCHHHHHHHHHhcCCCCcceEEEecC------CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEE
Q 025896          133 APRENAELMISKLGLSDFFQVVILGD------ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVG  206 (246)
Q Consensus       133 ~~~~~~~~~l~~~~l~~~f~~~~~~~------~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~  206 (246)
                      ..........+.++.  .|+.+.+..      .....++++.+++.+++++|++++++++|||+.||++|++.+|+.+++
T Consensus       164 ~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam  241 (274)
T 3fzq_A          164 SNEKVFDEVKDILQD--KMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM  241 (274)
T ss_dssp             CCHHHHHHHHHHHGG--GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE
T ss_pred             cCHHHHHHHHHHhhc--ceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe
Confidence            334445555555432  245444443      346778899999999999999999999999999999999999965554


Q ss_pred             EcCCCChhhhhccCCcEEecCCCChhhHHHHhhhh
Q 025896          207 LTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       207 v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                         ++..++ ....|++++.+..+-++...|+++.
T Consensus       242 ---~na~~~-~k~~A~~v~~~~~edGv~~~l~~~~  272 (274)
T 3fzq_A          242 ---KNSHQQ-LKDIATSICEDIFDNGIYKELKRRN  272 (274)
T ss_dssp             ---TTSCHH-HHHHCSEEECCGGGTHHHHHHHHTT
T ss_pred             ---cCccHH-HHHhhhheeCCCchhHHHHHHHHhC
Confidence               444444 4457899999999999999988764

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=99.80  E-value=2.6e-20  Score=145.12  Aligned_cols=113  Identities=14%  Similarity=0.123  Sum_probs=80.1

Q ss_pred             HcCCeEEEEe-CCCHHH-HHHHHHhcCCCCcceEEEecCC----CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          122 DRGLKRAAVT-NAPREN-AELMISKLGLSDFFQVVILGDE----CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       122 ~~g~~i~i~s-~~~~~~-~~~~l~~~~l~~~f~~~~~~~~----~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      +..+++.++. ...... .....+.++  ..+..+.+...    ...+.+++.+++.+++++|++++++++|||+.||++
T Consensus       164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~  241 (283)
T 3dao_A          164 NDIIKFTVFHPDKCEELCTPVFIPAWN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIE  241 (283)
T ss_dssp             SCCCEEEEECSSCHHHHHTTTHHHHHT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHH
T ss_pred             cCceEEEEEcChHHHHHHHHHHHHHhc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence            4567777773 322222 233333433  23454444432    355677889999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      |++.+|+.+++-   + +.+.....|++++.+..+-++...|+++
T Consensus       242 ml~~ag~~vam~---n-a~~~~k~~A~~v~~s~~edGv~~~l~~~  282 (283)
T 3dao_A          242 MLQNAGISYAVS---N-ARQEVIAAAKHTCAPYWENGVLSVLKSF  282 (283)
T ss_dssp             HHHHSSEEEEET---T-SCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred             HHHhCCCEEEcC---C-CCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence            999999765553   3 3334456789999999999999888764

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.79  E-value=5.7e-19  Score=144.19  Aligned_cols=97  Identities=21%  Similarity=0.274  Sum_probs=88.2

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCC------------HHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHH
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAP------------RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      ++||+.++|+.|+++|++++|+||.+            ...+...++.+|+.  |+.++++++....||+|.+|..++++
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~~  165 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQ  165 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTSTTSSHHHHHHHHH
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCCCCCHHHHHHHHHH
Confidence            78999999999999999999999965            22377788899985  99999999999999999999999999


Q ss_pred             cC----CCCCcEEEEecCh-----------------hhhHHHHhcCCCEEEE
Q 025896          177 LK----VSKDHTFVFEDSV-----------------SGIKAGVAAGLPVVGL  207 (246)
Q Consensus       177 ~~----~~~~~~~~igD~~-----------------~Di~~a~~~G~~~i~v  207 (246)
                      ++    +++++|+||||+.                 +|+.+|+++|+.++..
T Consensus       166 l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~p  217 (416)
T 3zvl_A          166 ANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATP  217 (416)
T ss_dssp             SSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECH
T ss_pred             hCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCc
Confidence            97    9999999999997                 8999999999997654

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.79  E-value=1.2e-20  Score=142.72  Aligned_cols=201  Identities=14%  Similarity=0.074  Sum_probs=126.0

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHH---HhCCCC-chhhhh--hHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAK---ILFPDD-LPRGLK--FCED   94 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~--~~~~   94 (246)
                      ++|+|+||+||||+++...+...+.++++++... |..+.      ..+|++......   .+.... ......  +...
T Consensus         2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-G~~v~------i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~   74 (231)
T 1wr8_A            2 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESL-GIPIM------LVTGNTVQFAEAASILIGTSGPVVAEDGGAISYK   74 (231)
T ss_dssp             CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHT-TCCEE------EECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEET
T ss_pred             ceeEEEEECCCCCCCCCCcCCHHHHHHHHHHHHC-CCEEE------EEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeC
Confidence            3799999999999998877766777777666211 22221      223333322211   111000 000000  0000


Q ss_pred             HHHHHHHHhhccCCCcccHHHHHHHHH-Hc-CCeE-----------EEEe-CCCHHHHHHHHHhcCCCCcceEEEecC--
Q 025896           95 KEAMFRKLASEQLKPISGLDKVKKWIE-DR-GLKR-----------AAVT-NAPRENAELMISKLGLSDFFQVVILGD--  158 (246)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~-g~~i-----------~i~s-~~~~~~~~~~l~~~~l~~~f~~~~~~~--  158 (246)
                           .+.. ....+ +.+.++++.++ +. |+.+           .+++ +.....+...++.++  ..|+.+ ++.  
T Consensus        75 -----~~~~-~~~~l-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~  144 (231)
T 1wr8_A           75 -----KKRI-FLASM-DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELN--LNLVAV-DSGFA  144 (231)
T ss_dssp             -----TEEE-ESCCC-SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT--CSCEEE-ECSSC
T ss_pred             -----CEEE-EeccH-HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC--CcEEEE-ecCcE
Confidence                 0000 01122 66777777776 54 5443           5555 446677777777765  456655 332  


Q ss_pred             --CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHH
Q 025896          159 --ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSA  236 (246)
Q Consensus       159 --~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~  236 (246)
                        ....++|++..++.+++++|++++++++|||+.||++|++.+|+. +.+.+  ...+. ...|++++.+..+-++...
T Consensus       145 ~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~--~~~~~-~~~a~~v~~~~~e~Gv~~~  220 (231)
T 1wr8_A          145 IHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQ--APKIL-KENADYVTKKEYGEGGAEA  220 (231)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTT--SCHHH-HTTCSEECSSCHHHHHHHH
T ss_pred             EEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecC--CCHHH-HhhCCEEecCCCcchHHHH
Confidence              235688999999999999999999999999999999999999987 44433  33333 4579999999999888888


Q ss_pred             Hhhhhc
Q 025896          237 LEELDK  242 (246)
Q Consensus       237 l~~~~~  242 (246)
                      ++.+..
T Consensus       221 l~~~~~  226 (231)
T 1wr8_A          221 IYHILE  226 (231)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877543

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.79  E-value=2.5e-20  Score=144.08  Aligned_cols=76  Identities=24%  Similarity=0.281  Sum_probs=64.9

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChhhhh-------ccCCcEEecCCCCh
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVLL-------EANPTFLIKDYDDP  231 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~-------~~~~~~~i~~~~el  231 (246)
                      ...+||++..++.+++++|++++++++|||++ +|+.+|+.+|+.+++|.+|+...+..       ...|+++++++.| 
T Consensus       183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~e-  261 (268)
T 3qgm_A          183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKD-  261 (268)
T ss_dssp             EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHH-
T ss_pred             eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHH-
Confidence            56799999999999999999999999999995 99999999999999999986443322       2379999999998 


Q ss_pred             hhHHHH
Q 025896          232 KLWSAL  237 (246)
Q Consensus       232 ~~~~~l  237 (246)
                       +..++
T Consensus       262 -l~~~l  266 (268)
T 3qgm_A          262 -MVEAL  266 (268)
T ss_dssp             -HHHTC
T ss_pred             -HHHHH
Confidence             55544

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.79  E-value=1.4e-20  Score=146.37  Aligned_cols=79  Identities=14%  Similarity=0.133  Sum_probs=52.8

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ..+..++.+++.+++++|++++++++|||+.||++|++.+|+.+   ..++..++ ....|++++.+..+-++...++++
T Consensus       193 ~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~v---am~na~~~-~k~~A~~v~~~~~e~Gv~~~i~~~  268 (279)
T 3mpo_A          193 NRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGV---AMGNAIDE-VKEAAQAVTLTNAENGVAAAIRKY  268 (279)
T ss_dssp             ESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEEC---BC---CCH-HHHHCSCBC------CHHHHHC--
T ss_pred             cCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCcee---eccCCCHH-HHHhcceeccCCCccHHHHHHHHH
Confidence            34556889999999999999999999999999999999999544   44443433 445789999999999999999887


Q ss_pred             hcC
Q 025896          241 DKN  243 (246)
Q Consensus       241 ~~~  243 (246)
                      ..+
T Consensus       269 ~~~  271 (279)
T 3mpo_A          269 ALN  271 (279)
T ss_dssp             ---
T ss_pred             hcc
Confidence            654

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=99.78  E-value=1.5e-20  Score=144.57  Aligned_cols=207  Identities=17%  Similarity=0.222  Sum_probs=121.2

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHH---HHHHhCCCCchhhhhhHHHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNID---IAKILFPDDLPRGLKFCEDKEA   97 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~   97 (246)
                      ++|+|+||+||||+++...+.+.+.++++++... |..+.      ..+|++...   ....+....   ..........
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~-G~~~~------~aTGR~~~~~~~~~~~l~~~~---~i~~nGa~i~   71 (258)
T 2pq0_A            2 GRKIVFFDIDGTLLDEQKQLPLSTIEAVRRLKQS-GVYVA------IATGRAPFMFEHVRKQLGIDS---FVSFNGQYVV   71 (258)
T ss_dssp             CCCEEEECTBTTTBCTTSCCCHHHHHHHHHHHHT-TCEEE------EECSSCGGGSHHHHHHHTCCC---EEEGGGTEEE
T ss_pred             CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHC-CCEEE------EECCCChHHHHHHHHhcCCCE---EEECCCCEEE
Confidence            4799999999999999877777777777666211 22211      122333221   111110000   0000000000


Q ss_pred             HHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCH-------HHHHHHHHhcC-----C-------CCcceEEEecC
Q 025896           98 MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR-------ENAELMISKLG-----L-------SDFFQVVILGD  158 (246)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~-------~~~~~~l~~~~-----l-------~~~f~~~~~~~  158 (246)
                      ...+.......+.+.+.++++.+++.|+.+.++++...       ......+...+     +       .+.+..++..+
T Consensus        72 ~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~  151 (258)
T 2pq0_A           72 FEGNVLYKQPLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCR  151 (258)
T ss_dssp             ETTEEEEECCCCHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSC
T ss_pred             ECCEEEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECC
Confidence            00011112233456778888888888887777765430       11122222221     1       11222222211


Q ss_pred             -------------------------CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh
Q 025896          159 -------------------------ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE  213 (246)
Q Consensus       159 -------------------------~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~  213 (246)
                                               ....+..+...++.+++++|++++++++|||+.||++|++.+|+++++   ++..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam---~na~  228 (258)
T 2pq0_A          152 AEEEEPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM---GNAH  228 (258)
T ss_dssp             HHHHHHHHHHCTTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE---TTCC
T ss_pred             HHHHHHHHHhCCCeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe---CCCc
Confidence                                     123455567789999999999999999999999999999999987665   3433


Q ss_pred             hhhhccCCcEEecCCCChhhHHHHhhhh
Q 025896          214 HVLLEANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       214 ~~~~~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                      ++ .+..|++++.+..+-++...++++.
T Consensus       229 ~~-~k~~A~~v~~~~~~dGva~~i~~~~  255 (258)
T 2pq0_A          229 EE-VKRVADFVTKPVDKEGIWYGLKQLQ  255 (258)
T ss_dssp             HH-HHHTCSEEECCGGGTHHHHHHHHTT
T ss_pred             HH-HHHhCCEEeCCCCcchHHHHHHHhC
Confidence            44 4457999999999999999888754

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.78  E-value=3.2e-19  Score=127.48  Aligned_cols=101  Identities=10%  Similarity=0.008  Sum_probs=82.7

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHH--hcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhh
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMIS--KLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSG  193 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~--~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~D  193 (246)
                      .|++|++.|++++|+|+.  ...+..++  .+++. +|    .+     .++++..++.++++++++|+++++|||+.||
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~~----~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nD  111 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-TE----VS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEVSD  111 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-EE----CS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSGGG
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-EE----EC-----CCChHHHHHHHHHHcCcChHHEEEEeCCHhH
Confidence            689999999999999999  66777888  55654 32    11     3678899999999999999999999999999


Q ss_pred             hHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChh
Q 025896          194 IKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPK  232 (246)
Q Consensus       194 i~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~  232 (246)
                      +++++.+|+++++-    +..+.....+++++.+..+-+
T Consensus       112 i~~~~~ag~~~a~~----na~~~~k~~Ad~v~~~~~~~G  146 (168)
T 3ewi_A          112 EECLKRVGLSAVPA----DACSGAQKAVGYICKCSGGRG  146 (168)
T ss_dssp             HHHHHHSSEEEECT----TCCHHHHTTCSEECSSCTTTT
T ss_pred             HHHHHHCCCEEEeC----ChhHHHHHhCCEEeCCCCCcc
Confidence            99999999885542    233445578899999888766

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.78  E-value=2.7e-20  Score=146.53  Aligned_cols=90  Identities=13%  Similarity=0.086  Sum_probs=70.2

Q ss_pred             cceEEEecCC----CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEe
Q 025896          150 FFQVVILGDE----CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLI  225 (246)
Q Consensus       150 ~f~~~~~~~~----~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i  225 (246)
                      .++.+.+...    ...+.+++.+++.+++++|++++++++|||+.||++|++.+|+.+++   ++..++ .+..|++++
T Consensus       209 ~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam---~na~~~-~k~~Ad~v~  284 (304)
T 3l7y_A          209 RLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM---ANAPKN-VKAAANYQA  284 (304)
T ss_dssp             TEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC---TTSCHH-HHHHCSEEC
T ss_pred             eEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc---CCcCHH-HHHhccEEc
Confidence            3555554432    24567788899999999999999999999999999999999965444   443433 446789999


Q ss_pred             cCCCChhhHHHHhhhhcC
Q 025896          226 KDYDDPKLWSALEELDKN  243 (246)
Q Consensus       226 ~~~~el~~~~~l~~~~~~  243 (246)
                      .+..+-++...|+++-..
T Consensus       285 ~~~~edGv~~~l~~~~~~  302 (304)
T 3l7y_A          285 KSNDESGVLDVIDNYLAS  302 (304)
T ss_dssp             CCGGGTHHHHHHHHHHHC
T ss_pred             CCCCcchHHHHHHHHHHh
Confidence            999999999988876543

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=99.77  E-value=1.2e-20  Score=145.40  Aligned_cols=207  Identities=14%  Similarity=0.160  Sum_probs=122.5

Q ss_pred             ceEEEeCCCccccChhh-HHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHH---HHhCC-CCchhhhhhHHHHHH
Q 025896           23 EAVLFDVDGTLCDSDPL-HHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIA---KILFP-DDLPRGLKFCEDKEA   97 (246)
Q Consensus        23 k~iifD~DGTL~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~   97 (246)
                      |+|+||+||||++++.. +.+.+.++++++... |..+.      ..+|++ ....   ..+.. ...............
T Consensus         3 kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~-G~~~~------iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~   74 (261)
T 2rbk_A            3 KALFFDIDGTLVSFETHRIPSSTIEALEAAHAK-GLKIF------IATGRP-KAIINNLSELQDRNLIDGYITMNGAYCF   74 (261)
T ss_dssp             CEEEECSBTTTBCTTTSSCCHHHHHHHHHHHHT-TCEEE------EECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEE
T ss_pred             cEEEEeCCCCCcCCCCCcCCHHHHHHHHHHHHC-CCEEE------EECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEE
Confidence            89999999999998876 666666666655211 22221      122333 2110   00000 000000000000000


Q ss_pred             HHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCH------HHHH-HHHHhcCC-------------CCcceEEEec
Q 025896           98 MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR------ENAE-LMISKLGL-------------SDFFQVVILG  157 (246)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~------~~~~-~~l~~~~l-------------~~~f~~~~~~  157 (246)
                      .-.+.........+++.++++.+++.|+.+.+.++...      .... ..+..+++             .+++..++..
T Consensus        75 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~  154 (261)
T 2rbk_A           75 VGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFI  154 (261)
T ss_dssp             ETTEEEEECCCCHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECC
T ss_pred             ECCEEEEecCCCHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEe
Confidence            00011112233457788899999888888887765432      2222 22233332             2344443332


Q ss_pred             C-------------------------CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC
Q 025896          158 D-------------------------ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP  212 (246)
Q Consensus       158 ~-------------------------~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~  212 (246)
                      +                         ....++|++..++.+++++|++++++++|||+.||++|++.+|+.+++   ++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~---~n~  231 (261)
T 2rbk_A          155 TEEEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM---GQA  231 (261)
T ss_dssp             CHHHHHHHGGGSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTS
T ss_pred             CHHHHHHHHHhcCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe---cCc
Confidence            1                         135678899999999999999999999999999999999999985544   333


Q ss_pred             hhhhhccCCcEEecCCCChhhHHHHhhhh
Q 025896          213 EHVLLEANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       213 ~~~~~~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                      ..+. ...|+++++++.+-++...++++.
T Consensus       232 ~~~~-~~~a~~v~~~~~~dGv~~~l~~~~  259 (261)
T 2rbk_A          232 KEDV-KAAADYVTAPIDEDGISKAMKHFG  259 (261)
T ss_dssp             CHHH-HHHSSEECCCGGGTHHHHHHHHHT
T ss_pred             cHHH-HhhCCEEeccCchhhHHHHHHHhC
Confidence            3333 457899999999988888887653

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.74  E-value=2.6e-18  Score=132.69  Aligned_cols=78  Identities=17%  Similarity=0.172  Sum_probs=65.3

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhh
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      ...+.+++.+++.+++++|++++++++|||+.||++|++.+|+.+++   ++..++ ....|++++.+..+-++...|++
T Consensus       189 ~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam---~na~~~-~k~~Ad~v~~~~~edGv~~~l~~  264 (268)
T 3r4c_A          189 NVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM---GNASEK-VQSVADFVTDTVDNSGLYKALKH  264 (268)
T ss_dssp             EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHH-HHHTCSEECCCTTTTHHHHHHHH
T ss_pred             eeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe---CCCcHH-HHHhcCEeeCCCCcCHHHHHHHH
Confidence            35567788999999999999999999999999999999999965443   444444 44579999999999999999987


Q ss_pred             hh
Q 025896          240 LD  241 (246)
Q Consensus       240 ~~  241 (246)
                      ++
T Consensus       265 ~~  266 (268)
T 3r4c_A          265 FG  266 (268)
T ss_dssp             TT
T ss_pred             hC
Confidence            64

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=99.72  E-value=4.4e-19  Score=137.34  Aligned_cols=116  Identities=16%  Similarity=0.126  Sum_probs=84.3

Q ss_pred             HcCCeEEEEeCCCHHHHHHHHHhcC--CCCcceEEEec----CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          122 DRGLKRAAVTNAPRENAELMISKLG--LSDFFQVVILG----DECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       122 ~~g~~i~i~s~~~~~~~~~~l~~~~--l~~~f~~~~~~----~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      +.++++.++++...  ....++.++  +...|+.+.++    +....+++++..++.+++++|++++++++|||+.||++
T Consensus       144 ~~~~ki~i~~~~~~--~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~  221 (271)
T 1rlm_A          144 DVLFKFSLNLPDEQ--IPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAE  221 (271)
T ss_dssp             SCEEEEEEECCGGG--HHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             CceEEEEEEcCHHH--HHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHH
Confidence            44567777766532  444444333  44456666555    23457889999999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhhhcC
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKN  243 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~~~  243 (246)
                      |++.+|+.++ +  ++..++. ...+++++.+..+-++...++.+...
T Consensus       222 m~~~ag~~va-~--~na~~~~-k~~a~~v~~~~~~dGVa~~l~~~~~~  265 (271)
T 1rlm_A          222 MLKMARYSFA-M--GNAAENI-KQIARYATDDNNHEGALNVIQAVLDN  265 (271)
T ss_dssp             HHHHCSEEEE-C--TTCCHHH-HHHCSEECCCGGGTHHHHHHHHHHHT
T ss_pred             HHHHcCCeEE-e--CCccHHH-HHhCCeeCcCCCCChHHHHHHHHHhh
Confidence            9999998544 3  3333333 35789999999998888888876543

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=99.70  E-value=3e-18  Score=133.57  Aligned_cols=116  Identities=15%  Similarity=0.070  Sum_probs=77.9

Q ss_pred             HcCCeEEEEeCCCHHHHHHHHHhcC--CCCcceEEEecC----CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          122 DRGLKRAAVTNAPRENAELMISKLG--LSDFFQVVILGD----ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       122 ~~g~~i~i~s~~~~~~~~~~l~~~~--l~~~f~~~~~~~----~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      ..++..+++++.+........+.+.  +...+..+++..    ....+.+++.+++.+++++|++++++++|||+.||++
T Consensus       160 ~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~  239 (285)
T 3pgv_A          160 PQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAE  239 (285)
T ss_dssp             CSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHH
T ss_pred             CCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHH
Confidence            3445555666555444433333221  112244343332    2345677889999999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCc--EEecCCCChhhHHHHhhhh
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPT--FLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~--~~i~~~~el~~~~~l~~~~  241 (246)
                      |++.+|+.   +..++..++... .++  +++.+..+-++...|+++-
T Consensus       240 ml~~ag~~---vAm~Na~~~vk~-~A~~~~v~~sn~edGva~~i~~~~  283 (285)
T 3pgv_A          240 MLSMAGKG---CIMANAHQRLKD-LHPELEVIGSNADDAVPRYLRKLY  283 (285)
T ss_dssp             HHHHSSEE---EECTTSCHHHHH-HCTTSEECCCGGGTHHHHHHHHHH
T ss_pred             HHHhcCCE---EEccCCCHHHHH-hCCCCEecccCCcchHHHHHHHHh
Confidence            99999954   444454444443 444  5889999999999888753

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.69  E-value=6.8e-17  Score=121.63  Aligned_cols=75  Identities=15%  Similarity=0.041  Sum_probs=61.2

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          162 RAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       162 ~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      .+.+++..++.++++++++++++++|||+.||++|++.+|+.+ .+  ++...+.. ..+++++.+..+-++...++.+
T Consensus       150 ~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~v-a~--~n~~~~~k-~~a~~v~~~~~~~Gv~~~l~~~  224 (227)
T 1l6r_A          150 RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKA-CP--ANATDNIK-AVSDFVSDYSYGEEIGQIFKHF  224 (227)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEE-EC--TTSCHHHH-HHCSEECSCCTTHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceE-Ee--cCchHHHH-HhCCEEecCCCCcHHHHHHHHH
Confidence            3467788999999999999999999999999999999999853 33  33333333 4689999999998988888765

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.69  E-value=2.4e-16  Score=120.39  Aligned_cols=99  Identities=11%  Similarity=0.104  Sum_probs=77.0

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHhcCCC--CcceEEEecCCCCCCCCChHHHHHHHHHcCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAP---RENAELMISKLGLS--DFFQVVILGDECERAKPFPDPYFKALEMLKVS  180 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~---~~~~~~~l~~~~l~--~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  180 (246)
                      ...++||+.++|+.|++.|++++|+||.+   ...+...|+.+|+.  .+|+.+++.+..  .||.  ....+. ..+. 
T Consensus        99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--~K~~--~~~~~~-~~~~-  172 (258)
T 2i33_A           99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--KGKE--KRRELV-SQTH-  172 (258)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--CSSH--HHHHHH-HHHE-
T ss_pred             CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--CCcH--HHHHHH-HhCC-
Confidence            46789999999999999999999999998   55677888889998  778877766542  3443  333333 2333 


Q ss_pred             CCcEEEEecChhhhHHHH-------h---------cCCCEEEEcCCC
Q 025896          181 KDHTFVFEDSVSGIKAGV-------A---------AGLPVVGLTTRN  211 (246)
Q Consensus       181 ~~~~~~igD~~~Di~~a~-------~---------~G~~~i~v~~~~  211 (246)
                       ..+++|||+.+|+.+|.       .         +|+.++.+.++.
T Consensus       173 -~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~  218 (258)
T 2i33_A          173 -DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPM  218 (258)
T ss_dssp             -EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred             -CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCC
Confidence             44999999999999982       3         899999998883

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=99.65  E-value=3.2e-17  Score=127.96  Aligned_cols=74  Identities=14%  Similarity=0.101  Sum_probs=60.0

Q ss_pred             CCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          163 AKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      +.++...++.+++.+|++++++++|||+.||++|++.+|+ .+.+.+  ...+. ...+++++.+..+-++...++++
T Consensus       214 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~--~~~~~-~~~a~~v~~~~~~dGVa~~i~~~  287 (288)
T 1nrw_A          214 KASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGN--AREDI-KSIADAVTLTNDEHGVAHMMKHL  287 (288)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTT--CCHHH-HHHCSEECCCGGGTHHHHHHHHT
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcC--CCHHH-HhhCceeecCCCcChHHHHHHHh
Confidence            4456778999999999999999999999999999999998 455533  33333 34589999999999998888764

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=99.64  E-value=4.3e-17  Score=129.71  Aligned_cols=126  Identities=13%  Similarity=0.053  Sum_probs=83.5

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc-eEEEecCC----------------CCCCCCC---
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDE----------------CERAKPF---  166 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f-~~~~~~~~----------------~~~~kp~---  166 (246)
                      ..+.+++.++|+.|++ |+++.++|+..........+.+++...+ ......+.                ....++.   
T Consensus       102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~  180 (332)
T 1y8a_A          102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL  180 (332)
T ss_dssp             CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred             CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence            5678999999999999 9999999988766666666666663222 11110000                0000110   


Q ss_pred             ------------hHHHH------------HHHHHcCCCCCc----EEEEecChhhhHHHHhc----CCCEEEEcCCCChh
Q 025896          167 ------------PDPYF------------KALEMLKVSKDH----TFVFEDSVSGIKAGVAA----GLPVVGLTTRNPEH  214 (246)
Q Consensus       167 ------------~~~~~------------~~~~~~~~~~~~----~~~igD~~~Di~~a~~~----G~~~i~v~~~~~~~  214 (246)
                                  +..+.            ..++  ++++++    |++|||+.||++|++.+    |+.+++  +.  . 
T Consensus       181 l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~--gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na--~-  253 (332)
T 1y8a_A          181 FRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR--GYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NG--N-  253 (332)
T ss_dssp             HHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH--HHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SC--C-
T ss_pred             HHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh--ccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cC--C-
Confidence                        11111            1222  667788    99999999999999999    987554  32  2 


Q ss_pred             hhhccCCcEEecCCCChhhHHHHhhh
Q 025896          215 VLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       215 ~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      +.....|++++.+.++-++...++.+
T Consensus       254 ~~lk~~Ad~v~~~~~~dGV~~~l~~~  279 (332)
T 1y8a_A          254 EYALKHADVVIISPTAMSEAKVIELF  279 (332)
T ss_dssp             HHHHTTCSEEEECSSTHHHHHHHHHH
T ss_pred             HHHHhhCcEEecCCCCCHHHHHHHHH
Confidence            33445789999998887777777654

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=99.61  E-value=4.4e-17  Score=126.77  Aligned_cols=79  Identities=15%  Similarity=0.109  Sum_probs=63.6

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ..+.+++.+++.+++++|++++++++|||+.||++|++.+|+. +.+  ++...+.. ..|++++.+..+-++...++++
T Consensus       194 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~--~n~~~~~~-~~a~~v~~~~~~dGV~~~l~~~  269 (282)
T 1rkq_A          194 DKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVG-VAV--DNAIPSVK-EVANFVTKSNLEDGVAFAIEKY  269 (282)
T ss_dssp             ETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EEC--TTSCHHHH-HHCSEECCCTTTTHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcE-EEe--cCCcHHHH-hhCCEEecCCCcchHHHHHHHH
Confidence            4566788999999999999999999999999999999999974 334  33333333 3689999999998898888876


Q ss_pred             hcC
Q 025896          241 DKN  243 (246)
Q Consensus       241 ~~~  243 (246)
                      ...
T Consensus       270 ~~~  272 (282)
T 1rkq_A          270 VLN  272 (282)
T ss_dssp             TTC
T ss_pred             Hhc
Confidence            543

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=99.61  E-value=5.6e-17  Score=127.25  Aligned_cols=80  Identities=11%  Similarity=0.047  Sum_probs=65.3

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEec-CCCChhhHHHHhh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIK-DYDDPKLWSALEE  239 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~-~~~el~~~~~l~~  239 (246)
                      ..+.+++.+++.+++.+|++++++++|||+.||++|++.+|+. +.+  ++...+.. ..+++++. +..+-++...+++
T Consensus       220 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~--~na~~~~k-~~a~~v~~~~~~~dGVa~~l~~  295 (301)
T 2b30_A          220 KLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAV--ANATDSAK-SHAKCVLPVSHREGAVAYLLKK  295 (301)
T ss_dssp             ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EEC--TTCCHHHH-HHSSEECSSCTTTTHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEE--cCCcHHHH-hhCCEEEccCCCCcHHHHHHHH
Confidence            4566788999999999999999999999999999999999985 334  33333333 46899999 9999899999988


Q ss_pred             hhcCC
Q 025896          240 LDKNK  244 (246)
Q Consensus       240 ~~~~~  244 (246)
                      +-..+
T Consensus       296 ~~~~~  300 (301)
T 2b30_A          296 VFDLK  300 (301)
T ss_dssp             HHTTC
T ss_pred             HHhcC
Confidence            76655

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.60  E-value=3.9e-15  Score=116.83  Aligned_cols=101  Identities=6%  Similarity=-0.068  Sum_probs=86.8

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHH---HHHHHHh--------cCCCCcceEEEecCCCCCCCCChHHHHHHHH
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPREN---AELMISK--------LGLSDFFQVVILGDECERAKPFPDPYFKALE  175 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~---~~~~l~~--------~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~  175 (246)
                      ..++||+.++|+.|+++|++++++||.+...   +...+++        +|+  .|+.+++++.. ..||+|..+..+++
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~~  263 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIFW  263 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHHH
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHHH
Confidence            4569999999999999999999999997543   4566777        888  48888877664 46899999999999


Q ss_pred             HcCCCCCc-EEEEecChhhhHHHHhcCCCEEEEcCC
Q 025896          176 MLKVSKDH-TFVFEDSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       176 ~~~~~~~~-~~~igD~~~Di~~a~~~G~~~i~v~~~  210 (246)
                      +++..+.+ +++|||+.+|+.+|+++|+.+++|.+|
T Consensus       264 ~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          264 KHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             HHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             HHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence            99887655 799999999999999999999999887

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=99.56  E-value=3.9e-17  Score=125.54  Aligned_cols=75  Identities=9%  Similarity=-0.079  Sum_probs=61.6

Q ss_pred             CCCCCChHHHHHHHHHcCCCC--CcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHh
Q 025896          161 ERAKPFPDPYFKALEMLKVSK--DHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~--~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~  238 (246)
                      .. ++++.+++.+++++|+++  +++++|||+.||+.|++.+|+.+++- +.   .+ .  .+++++.+..+.++...++
T Consensus       173 ~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na---~~-~--~~~~~~~~~~~~gv~~~~~  244 (259)
T 3zx4_A          173 KG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RG---DP-P--EGVLATPAPGPEGFRYAVE  244 (259)
T ss_dssp             SS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SS---CC-C--TTCEECSSCHHHHHHHHHH
T ss_pred             CC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Ch---hh-c--CCcEEeCCCCchHHHHHHH
Confidence            45 788999999999999999  99999999999999999999764444 22   22 2  6789999999988888888


Q ss_pred             hhhcC
Q 025896          239 ELDKN  243 (246)
Q Consensus       239 ~~~~~  243 (246)
                      .+-..
T Consensus       245 ~~~~~  249 (259)
T 3zx4_A          245 RYLLP  249 (259)
T ss_dssp             HHTTT
T ss_pred             HHHHh
Confidence            76543

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=99.56  E-value=9.2e-16  Score=118.44  Aligned_cols=78  Identities=17%  Similarity=0.124  Sum_probs=63.6

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ..+.+++..++.+++++|++++++++|||+.||++|++.+|+.++   .++...+.. ..+++++.+..+-++...++++
T Consensus       186 ~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~---~~n~~~~~~-~~a~~v~~~~~~dGv~~~i~~~  261 (268)
T 1nf2_A          186 PKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVA---MENAIEKVK-EASDIVTLTNNDSGVSYVLERI  261 (268)
T ss_dssp             CTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEE---CTTSCHHHH-HHCSEECCCTTTTHHHHHHTTB
T ss_pred             CCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEE---ecCCCHHHH-hhCCEEEccCCcchHHHHHHHH
Confidence            456778899999999999999999999999999999999998543   334333433 3589999999998899888876


Q ss_pred             hc
Q 025896          241 DK  242 (246)
Q Consensus       241 ~~  242 (246)
                      .+
T Consensus       262 ~~  263 (268)
T 1nf2_A          262 ST  263 (268)
T ss_dssp             CB
T ss_pred             HH
Confidence            54

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=99.45  E-value=1.5e-13  Score=103.73  Aligned_cols=100  Identities=17%  Similarity=0.220  Sum_probs=72.7

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCH----HHHHHHHHhcCCCCcce-EEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPR----ENAELMISKLGLSDFFQ-VVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~----~~~~~~l~~~~l~~~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      ...+++||+.++|+.|++.|++++++|+.+.    ......|+++|+..+++ .++....    ++.....+..+++.|.
T Consensus        98 g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~----~~~K~~~r~~L~~~gy  173 (260)
T 3pct_A           98 RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKD----KSNKSVRFKQVEDMGY  173 (260)
T ss_dssp             TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESS----CSSSHHHHHHHHTTTC
T ss_pred             CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCC----CCChHHHHHHHHhcCC
Confidence            3578999999999999999999999999865    47888999999987663 3333321    2333444444444444


Q ss_pred             CCCcEEEEecChhhhHH--------HHh---------cCCCEEEEcCC
Q 025896          180 SKDHTFVFEDSVSGIKA--------GVA---------AGLPVVGLTTR  210 (246)
Q Consensus       180 ~~~~~~~igD~~~Di~~--------a~~---------~G~~~i~v~~~  210 (246)
                        +-+++|||..+|+.+        ++.         -|-..|.+.++
T Consensus       174 --~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp  219 (260)
T 3pct_A          174 --DIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNT  219 (260)
T ss_dssp             --EEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCC
T ss_pred             --CEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence              449999999999987        333         56677777666

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=99.44  E-value=2e-13  Score=103.18  Aligned_cols=100  Identities=12%  Similarity=0.145  Sum_probs=72.4

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCH----HHHHHHHHhcCCCCcce-EEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPR----ENAELMISKLGLSDFFQ-VVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~----~~~~~~l~~~~l~~~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      ...+++||+.++|+.|++.|++++++|+.+.    ......|+++|+..+++ .++....   ...+......+.+. |.
T Consensus        98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~---~~~K~~~r~~l~~~-Gy  173 (262)
T 3ocu_A           98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKD---KSAKAARFAEIEKQ-GY  173 (262)
T ss_dssp             TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESS---CSCCHHHHHHHHHT-TE
T ss_pred             CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCC---CCChHHHHHHHHhc-CC
Confidence            3578999999999999999999999999865    57888999999987662 3443322   22344444445444 43


Q ss_pred             CCCcEEEEecChhhhHH--------HHh---------cCCCEEEEcCC
Q 025896          180 SKDHTFVFEDSVSGIKA--------GVA---------AGLPVVGLTTR  210 (246)
Q Consensus       180 ~~~~~~~igD~~~Di~~--------a~~---------~G~~~i~v~~~  210 (246)
                        ..+++|||..+|+.+        ++.         -|-..|.+.++
T Consensus       174 --~iv~~vGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp  219 (262)
T 3ocu_A          174 --EIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNA  219 (262)
T ss_dssp             --EEEEEEESSGGGGCSTTTTCCHHHHHHHHHHTGGGBTTTEEECCCS
T ss_pred             --CEEEEECCChHHhccccccCCHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence              349999999999987        232         46667777665

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=99.43  E-value=5.8e-16  Score=123.14  Aligned_cols=71  Identities=23%  Similarity=0.165  Sum_probs=57.0

Q ss_pred             CCCCCChHHHHHHHHHc----------------------CC-----CCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCC
Q 025896          161 ERAKPFPDPYFKALEML----------------------KV-----SKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNP  212 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~----------------------~~-----~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~  212 (246)
                      ..+||++..|+.+++.+                      |+     ++++++||||++ +|+.+|+++|+.+++|.+|..
T Consensus       243 ~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~  322 (352)
T 3kc2_A          243 TLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVY  322 (352)
T ss_dssp             ECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSC
T ss_pred             EecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCCC
Confidence            47999999999776653                      22     579999999999 699999999999999999843


Q ss_pred             hhhh--hccCCcEEecCCCCh
Q 025896          213 EHVL--LEANPTFLIKDYDDP  231 (246)
Q Consensus       213 ~~~~--~~~~~~~~i~~~~el  231 (246)
                      ..+.  ....|+++++++.|+
T Consensus       323 ~~~~~~~~~~pd~vi~~l~el  343 (352)
T 3kc2_A          323 NEGDDLKECKPTLIVNDVFDA  343 (352)
T ss_dssp             CTTCCCTTCCCSEECSSHHHH
T ss_pred             CcccccccCCCCEEECCHHHH
Confidence            3222  246799999999993

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=99.35  E-value=1.5e-13  Score=100.33  Aligned_cols=98  Identities=13%  Similarity=0.169  Sum_probs=87.0

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      .+.++||+.++|++|++. ++++|+|++...+++.+++.+++..+|+.+++.+++...|   ..|.+.++.+|.++++|+
T Consensus        66 ~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~v  141 (195)
T 2hhl_A           66 YVLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHR---GNYVKDLSRLGRELSKVI  141 (195)
T ss_dssp             EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEET---TEEECCGGGSSSCGGGEE
T ss_pred             EEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceecC---CceeeeHhHhCCChhHEE
Confidence            367899999999999998 9999999999999999999999999999999888765554   456778899999999999


Q ss_pred             EEecChhhhHHHHhcCCCEEEE
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      +|||+..++.++..+|+.+..+
T Consensus       142 ivDDs~~~~~~~~~ngi~i~~~  163 (195)
T 2hhl_A          142 IVDNSPASYIFHPENAVPVQSW  163 (195)
T ss_dssp             EEESCGGGGTTCGGGEEECCCC
T ss_pred             EEECCHHHhhhCccCccEEeee
Confidence            9999999999999999875444

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=99.32  E-value=6.8e-14  Score=108.32  Aligned_cols=82  Identities=9%  Similarity=-0.023  Sum_probs=42.6

Q ss_pred             CCCCCChHHHHHHHHHcC-CCCCc--EEEEecChhhhHHHHhcCCCEEEEcCCCC-hhhhhcc-CCc-EEecCCCChhhH
Q 025896          161 ERAKPFPDPYFKALEMLK-VSKDH--TFVFEDSVSGIKAGVAAGLPVVGLTTRNP-EHVLLEA-NPT-FLIKDYDDPKLW  234 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~-~~~~~--~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~-~~~-~~i~~~~el~~~  234 (246)
                      ..+.+++.+++.+++.++ +++++  +++|||+.||++|++.+|+. +.+.++.. ..+.... .++ +++.+..+-++.
T Consensus       185 ~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa  263 (275)
T 1xvi_A          185 DASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREGPEGWR  263 (275)
T ss_dssp             ETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC--------------------------
T ss_pred             cCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCCchHHH
Confidence            456678899999999999 99999  99999999999999999985 55544432 2333322 378 899999998888


Q ss_pred             HHHhhhhcC
Q 025896          235 SALEELDKN  243 (246)
Q Consensus       235 ~~l~~~~~~  243 (246)
                      ..++++-..
T Consensus       264 ~~l~~~l~~  272 (275)
T 1xvi_A          264 EGLDHFFSA  272 (275)
T ss_dssp             ---------
T ss_pred             HHHHHHHHh
Confidence            888776543

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=99.31  E-value=4.2e-12  Score=99.35  Aligned_cols=129  Identities=10%  Similarity=0.002  Sum_probs=79.7

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEec----CCC----CCCC------CChHHHH
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILG----DEC----ERAK------PFPDPYF  171 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~----~~~----~~~k------p~~~~~~  171 (246)
                      ..++.||+.++++.|+++|++++++|++....++..++.+|+......+++.    ++.    ....      .+.....
T Consensus       139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~  218 (297)
T 4fe3_A          139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL  218 (297)
T ss_dssp             CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence            5789999999999999999999999999999999999999986432222221    110    0011      1112222


Q ss_pred             H--HHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCC----CC--hhhhhccCCcEEecCCCChhhH
Q 025896          172 K--ALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR----NP--EHVLLEANPTFLIKDYDDPKLW  234 (246)
Q Consensus       172 ~--~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~----~~--~~~~~~~~~~~~i~~~~el~~~  234 (246)
                      +  ....+.-+.++++++||+.||+.|++.+.-.-+++..|    ..  ..+.....+|.|+-+-.-..+.
T Consensus       219 k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~  289 (297)
T 4fe3_A          219 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVV  289 (297)
T ss_dssp             TCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHH
T ss_pred             HHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHH
Confidence            2  22233445678999999999999987543332333322    11  1112234567776654433333

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=99.29  E-value=2.7e-11  Score=91.98  Aligned_cols=78  Identities=17%  Similarity=0.114  Sum_probs=63.7

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhcc------CCcEEecCCCChhhH
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEA------NPTFLIKDYDDPKLW  234 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~------~~~~~i~~~~el~~~  234 (246)
                      ..+.+++..++.+++++|++++++++|||+.||++|++.+|+. +.+  ++..++....      .+++++.+..+-++.
T Consensus       158 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~--~na~~~~k~~a~~~~~~a~~v~~~~~~dGva  234 (244)
T 1s2o_A          158 PQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIV--RNAQPELLHWYDQWGDSRHYRAQSSHAGAIL  234 (244)
T ss_dssp             ETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EEC--TTCCHHHHHHHHHHCCTTEEECSSCHHHHHH
T ss_pred             cCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcE-EEE--cCCcHHHHHHHhcccccceeecCCcchhHHH
Confidence            5567788999999999999999999999999999999999975 333  4444444443      378999999999999


Q ss_pred             HHHhhhh
Q 025896          235 SALEELD  241 (246)
Q Consensus       235 ~~l~~~~  241 (246)
                      ..++++.
T Consensus       235 ~~i~~~~  241 (244)
T 1s2o_A          235 EAIAHFD  241 (244)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHhc
Confidence            8887754

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=99.29  E-value=1e-12  Score=95.02  Aligned_cols=95  Identities=14%  Similarity=0.187  Sum_probs=84.6

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ...++||+.++|+++++. ++++|+|++...+++.+++.++...+|+.+++.++....+   ..+.+.++.+|.++++|+
T Consensus        53 ~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~v  128 (181)
T 2ght_A           53 YVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHR---GNYVKDLSRLGRDLRRVL  128 (181)
T ss_dssp             EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEET---TEEECCGGGTCSCGGGEE
T ss_pred             EEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceecC---CcEeccHHHhCCCcceEE
Confidence            367899999999999998 9999999999999999999999999999998887664433   346678889999999999


Q ss_pred             EEecChhhhHHHHhcCCCE
Q 025896          186 VFEDSVSGIKAGVAAGLPV  204 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~  204 (246)
                      +|||+..++.++..+|+.+
T Consensus       129 ivdDs~~~~~~~~~ngi~i  147 (181)
T 2ght_A          129 ILDNSPASYVFHPDNAVPV  147 (181)
T ss_dssp             EECSCGGGGTTCTTSBCCC
T ss_pred             EEeCCHHHhccCcCCEeEe
Confidence            9999999999999999874

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=99.28  E-value=9.3e-12  Score=106.80  Aligned_cols=116  Identities=13%  Similarity=0.078  Sum_probs=85.0

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV  186 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  186 (246)
                      .++.|++.+.+++|++.|++++++|+.+...++...+.+|+..+|..+       .+..    ...+++++... +++++
T Consensus       456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~-------~P~~----K~~~v~~l~~~-~~v~~  523 (645)
T 3j08_A          456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEV-------LPHQ----KSEEVKKLQAK-EVVAF  523 (645)
T ss_dssp             CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSC-------CTTC----HHHHHHHHTTT-CCEEE
T ss_pred             CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeC-------CHHh----HHHHHHHHhhC-CeEEE
Confidence            357899999999999999999999999999999999999987544322       1222    33455555544 88999


Q ss_pred             EecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHh
Q 025896          187 FEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       187 igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~  238 (246)
                      |||+.||+.|++.+|+...+-   + ..+.....+|+++.+.+..++...++
T Consensus       524 vGDg~ND~~al~~A~vgiamg---~-g~~~a~~~AD~vl~~~~~~~i~~~i~  571 (645)
T 3j08_A          524 VGDGINDAPALAQADLGIAVG---S-GSDVAVESGDIVLIRDDLRDVVAAIQ  571 (645)
T ss_dssp             EECSSSCHHHHHHSSEEEEEC---C-CSCCSSCCSSSEESSCCTTHHHHHHH
T ss_pred             EeCCHhHHHHHHhCCEEEEeC---C-CcHHHHHhCCEEEecCCHHHHHHHHH
Confidence            999999999999999554333   2 33445568899995444433555543

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=99.10  E-value=2.6e-13  Score=103.49  Aligned_cols=62  Identities=6%  Similarity=-0.095  Sum_probs=47.2

Q ss_pred             CCCChHHHHHHHHHcCC-CCCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh-hhhhccCCcEEecCC
Q 025896          163 AKPFPDPYFKALEMLKV-SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE-HVLLEANPTFLIKDY  228 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~-~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~~~~~~i~~~  228 (246)
                      +..+..+++.+++.+++ +++++++|||+.||++|++.+|+.+++   ++.. .+.. ..|++++++.
T Consensus       177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~---gna~~~~~~-~~a~~v~~~~  240 (249)
T 2zos_A          177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV---GSLKHKKAQ-NVSSIIDVLE  240 (249)
T ss_dssp             SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE---SSCCCTTEE-EESSHHHHHH
T ss_pred             CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe---CCCCccccc-hhceEEeccc
Confidence            66788899999999998 999999999999999999999986443   2222 2233 3466666544

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=99.09  E-value=7.5e-10  Score=89.12  Aligned_cols=102  Identities=10%  Similarity=0.025  Sum_probs=66.9

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc--eEEEec-----CC-------CC-CCCCChHHHHH
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF--QVVILG-----DE-------CE-RAKPFPDPYFK  172 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~-----~~-------~~-~~kp~~~~~~~  172 (246)
                      +++|+++++++.|+++|++++|+|++....++.+.+++|+.--+  +.++..     ++       .+ ...........
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~  300 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQ  300 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHH
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHH
Confidence            37999999999999999999999999999999999998753111  222211     01       00 01122222233


Q ss_pred             HHHHc---CCCCCcEEEEecChhhhHHHHhcC-CC-EEEEcC
Q 025896          173 ALEML---KVSKDHTFVFEDSVSGIKAGVAAG-LP-VVGLTT  209 (246)
Q Consensus       173 ~~~~~---~~~~~~~~~igD~~~Di~~a~~~G-~~-~i~v~~  209 (246)
                      .++++   ......++++|||.+|+.|.+..+ .. .+.+++
T Consensus       301 ~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liinr  342 (385)
T 4gxt_A          301 TINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIHR  342 (385)
T ss_dssp             HHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEECC
T ss_pred             HHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEcC
Confidence            33332   344567999999999999999743 33 344443

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=98.98  E-value=1.9e-11  Score=93.84  Aligned_cols=64  Identities=5%  Similarity=-0.137  Sum_probs=47.7

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEec----ChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCC
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFED----SVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD  230 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD----~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~e  230 (246)
                      ..+..|..+++.+   +|++++++++|||    +.||++|.+.+|...+.+  ++ +.+..+..+++++.+..+
T Consensus       193 ~~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av--~N-A~~~~k~~a~~v~~~~~~  260 (262)
T 2fue_A          193 PEGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV--VS-PQDTVQRCREIFFPETAH  260 (262)
T ss_dssp             ETTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC--SS-HHHHHHHHHHHHCTTC--
T ss_pred             cCCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe--cC-CCHHHHHhhheeCCCCcC
Confidence            4556677788888   8999999999999    999999999998755555  33 444444567888776654

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=98.97  E-value=1.4e-11  Score=93.26  Aligned_cols=68  Identities=15%  Similarity=0.040  Sum_probs=53.5

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc--CCCEEEEcCCCChhhhhccCCcEEecC-CCChhhHHHH
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAA--GLPVVGLTTRNPEHVLLEANPTFLIKD-YDDPKLWSAL  237 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~--G~~~i~v~~~~~~~~~~~~~~~~~i~~-~~el~~~~~l  237 (246)
                      .....|..+++.+++++|     +++|||+.||++|.+.+  |..+++-+    +    ...+++++.+ ..+-++...|
T Consensus       156 ~~~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~N----a----~~~A~~v~~~~~~~~gV~~~l  222 (239)
T 1u02_A          156 VPGVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVGE----G----ETHAKFHVADYIEMRKILKFI  222 (239)
T ss_dssp             CTTCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEESS----S----CCCCSEEESSHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEECC----C----CCcceEEeCCCCCHHHHHHHH
Confidence            445567889999999988     99999999999999999  97655542    2    2468899988 6677777777


Q ss_pred             hhhh
Q 025896          238 EELD  241 (246)
Q Consensus       238 ~~~~  241 (246)
                      +.+-
T Consensus       223 ~~~~  226 (239)
T 1u02_A          223 EMLG  226 (239)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7653

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=98.95  E-value=3.8e-09  Score=87.00  Aligned_cols=100  Identities=13%  Similarity=0.173  Sum_probs=82.2

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc-C-------------CCCcceEEEecCCCCCCCCCh----
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL-G-------------LSDFFQVVILGDECERAKPFP----  167 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~-~-------------l~~~f~~~~~~~~~~~~kp~~----  167 (246)
                      .+...|++..+|++||+.| ++.++||++.......+..+ |             +.++||.++...    .||..    
T Consensus       244 Yv~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A----~KP~FF~~~  318 (555)
T 2jc9_A          244 YVVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDA----RKPLFFGEG  318 (555)
T ss_dssp             HBCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESC----CTTGGGTTC
T ss_pred             hcCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeC----CCCCcccCC
Confidence            4566789999999999999 99999999999998888876 6             347899876542    22221    


Q ss_pred             -------------------------HH-----HHHHHHHcCCCCCcEEEEecCh-hhhHHHH-hcCCCEEEEcCC
Q 025896          168 -------------------------DP-----YFKALEMLKVSKDHTFVFEDSV-SGIKAGV-AAGLPVVGLTTR  210 (246)
Q Consensus       168 -------------------------~~-----~~~~~~~~~~~~~~~~~igD~~-~Di~~a~-~~G~~~i~v~~~  210 (246)
                                               ..     +..+++.+|+.+.++++|||.. .||..++ .+|+.+++|-..
T Consensus       319 ~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE  393 (555)
T 2jc9_A          319 TVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE  393 (555)
T ss_dssp             CCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred             CcceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence                                     11     4888999999999999999999 9999997 899999999654

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=98.90  E-value=3.2e-09  Score=92.14  Aligned_cols=117  Identities=14%  Similarity=0.048  Sum_probs=87.6

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV  186 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  186 (246)
                      .++.|++.+.+++|++.|++++++|+.+......+.+.+|+..++..           ..|+-...+++.+.-..+.++|
T Consensus       553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~-----------~~P~~K~~~v~~l~~~g~~V~~  621 (736)
T 3rfu_A          553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAE-----------IMPEDKSRIVSELKDKGLIVAM  621 (736)
T ss_dssp             CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECS-----------CCHHHHHHHHHHHHHHSCCEEE
T ss_pred             ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEe-----------cCHHHHHHHHHHHHhcCCEEEE
Confidence            35789999999999999999999999999999999999998753321           1334445555655556778999


Q ss_pred             EecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHh
Q 025896          187 FEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       187 igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~  238 (246)
                      |||+.||+.|.+.+|+...+-   + ..+.....+|+++.+.+..++...++
T Consensus       622 vGDG~ND~paL~~AdvGIAmg---~-g~d~a~~~AD~vl~~~~~~~i~~ai~  669 (736)
T 3rfu_A          622 AGDGVNDAPALAKADIGIAMG---T-GTDVAIESAGVTLLHGDLRGIAKARR  669 (736)
T ss_dssp             EECSSTTHHHHHHSSEEEEES---S-SCSHHHHHCSEEECSCCSTTHHHHHH
T ss_pred             EECChHhHHHHHhCCEEEEeC---C-ccHHHHHhCCEEEccCCHHHHHHHHH
Confidence            999999999999999664443   2 22334457899996655544655543

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.90  E-value=5.7e-09  Score=90.83  Aligned_cols=116  Identities=13%  Similarity=0.099  Sum_probs=85.0

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV  186 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  186 (246)
                      .++.|++.+.+++|++.|++++++|+.+...+..+.+.+|+..+|..+     .  +..    ...+++.+.-. +++++
T Consensus       534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~-----~--P~~----K~~~v~~l~~~-~~v~~  601 (723)
T 3j09_A          534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEV-----L--PHQ----KSEEVKKLQAK-EVVAF  601 (723)
T ss_dssp             CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSC-----C--TTC----HHHHHHHHTTT-CCEEE
T ss_pred             CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccC-----C--HHH----HHHHHHHHhcC-CeEEE
Confidence            367899999999999999999999999999999999999987433211     1  122    23455555444 88999


Q ss_pred             EecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHh
Q 025896          187 FEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       187 igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~  238 (246)
                      |||+.||+.|.+.+|+.   +..++ ..+.....+|+++.+.+..++...++
T Consensus       602 vGDg~ND~~al~~A~vg---iamg~-g~~~a~~~AD~vl~~~~~~~i~~~i~  649 (723)
T 3j09_A          602 VGDGINDAPALAQADLG---IAVGS-GSDVAVESGDIVLIRDDLRDVVAAIQ  649 (723)
T ss_dssp             EECSSTTHHHHHHSSEE---EECCC-CSCCSSCCSSEECSSCCTTHHHHHHH
T ss_pred             EECChhhHHHHhhCCEE---EEeCC-CcHHHHHhCCEEEeCCCHHHHHHHHH
Confidence            99999999999999954   44443 33445568999995544444555543

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=98.82  E-value=9.2e-09  Score=92.65  Aligned_cols=126  Identities=16%  Similarity=0.162  Sum_probs=86.7

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcce----EEEecCCCCC----------------CCCCh
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQ----VVILGDECER----------------AKPFP  167 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~----------------~kp~~  167 (246)
                      ++.|++.+.++.|++.|++++++|+.+...+..+.+.+|+....+    .++.+.+...                ..-.|
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P  682 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP  682 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCS
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCH
Confidence            578999999999999999999999999999999999999864321    2222211110                11112


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          168 DPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      +-...+.+.+.-..+.++++||+.||+.|.+.|++...+- .   ..+.....+|+++.+.+-..+..++
T Consensus       683 ~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg-~---g~~~ak~aAd~vl~~~~~~~i~~~i  748 (995)
T 3ar4_A          683 SHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-S---GTAVAKTASEMVLADDNFSTIVAAV  748 (995)
T ss_dssp             SHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET-T---SCHHHHHTCSEEETTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC-C---CCHHHHHhCCEEECCCCHHHHHHHH
Confidence            3344455555444578999999999999999999865542 2   2233445789999764443355444

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=98.73  E-value=9.5e-08  Score=86.39  Aligned_cols=129  Identities=16%  Similarity=0.070  Sum_probs=89.2

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc------------------------eEEEecCCC--
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF------------------------QVVILGDEC--  160 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f------------------------~~~~~~~~~--  160 (246)
                      .++.|++.+.+++|++.|++++++|+.+...+..+.+.+|+..--                        ..++.+...  
T Consensus       603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~  682 (1034)
T 3ixz_A          603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD  682 (1034)
T ss_pred             CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh
Confidence            357899999999999999999999999999999999999884210                        011111100  


Q ss_pred             ----------------CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEE
Q 025896          161 ----------------ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFL  224 (246)
Q Consensus       161 ----------------~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~  224 (246)
                                      -.....|.-...+.+.+.-..+.++++||+.||+.|.+.||++..+   +.+..+.....+|++
T Consensus       683 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAM---g~ng~d~aK~aAD~V  759 (1034)
T 3ixz_A          683 MDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAM---GIAGSDAAKNAADMI  759 (1034)
T ss_pred             CCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEe---CCccCHHHHHhcCEE
Confidence                            0111123333334444433345699999999999999999976544   322334455689999


Q ss_pred             ecCCCChhhHHHHh
Q 025896          225 IKDYDDPKLWSALE  238 (246)
Q Consensus       225 i~~~~el~~~~~l~  238 (246)
                      +.+.+..++...++
T Consensus       760 l~~~~~~gI~~ai~  773 (1034)
T 3ixz_A          760 LLDDNFASIVTGVE  773 (1034)
T ss_pred             eccCCchHHHHHHH
Confidence            99998888887775

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=98.70  E-value=8.6e-08  Score=86.57  Aligned_cols=128  Identities=16%  Similarity=0.106  Sum_probs=85.9

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCc------------------------ceEEEecCCC---
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF------------------------FQVVILGDEC---  160 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~------------------------f~~~~~~~~~---  160 (246)
                      ++.|++.+.+++|++.|++++++|+.+...+..+.+.+|+...                        +..++.+...   
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~  678 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL  678 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence            4679999999999999999999999999999999999998621                        0112221110   


Q ss_pred             ---------------CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEe
Q 025896          161 ---------------ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLI  225 (246)
Q Consensus       161 ---------------~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i  225 (246)
                                     -.....|+-...+.+.+.-..+.++++||+.||+.|.+.|++...+-..+   .+.....+|+++
T Consensus       679 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~g---td~ak~aAD~Vl  755 (1028)
T 2zxe_A          679 STEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISG---SDVSKQAADMIL  755 (1028)
T ss_dssp             CHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSC---CHHHHHHCSEEE
T ss_pred             CHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCcc---CHHHHHhcCEEe
Confidence                           11223344444444443333467999999999999999999765542122   233345689998


Q ss_pred             cCCCChhhHHHHh
Q 025896          226 KDYDDPKLWSALE  238 (246)
Q Consensus       226 ~~~~el~~~~~l~  238 (246)
                      .+.+.-.+..+++
T Consensus       756 ~~~~~~~I~~~i~  768 (1028)
T 2zxe_A          756 LDDNFASIVTGVE  768 (1028)
T ss_dssp             TTCCTHHHHHHHH
T ss_pred             cCCCHHHHHHHHH
Confidence            7755544555543

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=98.67  E-value=3.1e-10  Score=86.25  Aligned_cols=44  Identities=5%  Similarity=-0.177  Sum_probs=32.8

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEec----ChhhhHHHHhcCCCEEEE
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFED----SVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD----~~~Di~~a~~~G~~~i~v  207 (246)
                      ..+..+..+++.+   +|++++++++|||    +.||++|.+.+|...+.+
T Consensus       184 ~~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av  231 (246)
T 2amy_A          184 PDGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV  231 (246)
T ss_dssp             ETTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC
T ss_pred             cCCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEe
Confidence            4455566677777   8999999999999    999999999988533444

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=98.65  E-value=9.3e-07  Score=69.50  Aligned_cols=38  Identities=13%  Similarity=0.241  Sum_probs=35.3

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL  145 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~  145 (246)
                      .++|++.++++.|+++|++++|||++....++.+...+
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~  180 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP  180 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence            57999999999999999999999999999999988763

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=98.62  E-value=5.8e-10  Score=84.67  Aligned_cols=43  Identities=5%  Similarity=-0.208  Sum_probs=33.6

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecC----hhhhHHHHhcCCCEEEE
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDS----VSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~----~~Di~~a~~~G~~~i~v  207 (246)
                      ..+..|..+++.+++    +++++++|||+    .||++|.+.+|...+.+
T Consensus       183 ~~gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v  229 (246)
T 3f9r_A          183 PVGWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKV  229 (246)
T ss_dssp             ETTCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEEC
T ss_pred             eCCCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEe
Confidence            345556677777777    88999999995    99999999887544555

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=98.57  E-value=2.8e-07  Score=81.84  Aligned_cols=126  Identities=16%  Similarity=0.072  Sum_probs=84.3

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCc-ceE---EEecCC--------------CCCCCCChHH
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF-FQV---VILGDE--------------CERAKPFPDP  169 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~-f~~---~~~~~~--------------~~~~kp~~~~  169 (246)
                      ++.|++.+.+++|++.|++++++|+.+...+..+.+++|+... ++.   ++.+.+              .......|+-
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~~  614 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQH  614 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHHH
Confidence            5789999999999999999999999999999999999998631 110   000000              0011122333


Q ss_pred             HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          170 YFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      ...+.+.+.-..+.++|+||+.||..|.+.+++...+- .+   .+.....+|+++.+-+--.+...+
T Consensus       615 K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~g---td~ak~aADiVl~~~~~~~I~~ai  678 (920)
T 1mhs_A          615 KYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GS---SDAARSAADIVFLAPGLGAIIDAL  678 (920)
T ss_dssp             HHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET-TS---CHHHHHSSSEEESSCCSHHHHHHH
T ss_pred             HHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc-cc---cHHHHHhcCeEEcCCCHHHHHHHH
Confidence            44444444333477999999999999999999765553 22   234445789988654443344444

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.45  E-value=6.6e-07  Score=61.29  Aligned_cols=40  Identities=13%  Similarity=-0.020  Sum_probs=32.5

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHhcCCC
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAP---RENAELMISKLGLS  148 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~---~~~~~~~l~~~~l~  148 (246)
                      +.|++.++|++|+++|+.++++|+.+   ...+...++.+|+.
T Consensus        25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~   67 (142)
T 2obb_A           25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE   67 (142)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence            34678999999999999999999997   34566667777775

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=98.39  E-value=2e-07  Score=82.55  Aligned_cols=118  Identities=14%  Similarity=0.162  Sum_probs=80.1

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC-cc-eEEEecCCC-----------------CCCCCChH
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD-FF-QVVILGDEC-----------------ERAKPFPD  168 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~-----------------~~~kp~~~  168 (246)
                      ++.|++.+.+++|++.|++++++|+.+...+..+.+++|+.. .+ +.++.+.+.                 ......|+
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~  567 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPE  567 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHH
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHH
Confidence            568999999999999999999999999999999999999852 11 001111000                 01122344


Q ss_pred             HHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCC
Q 025896          169 PYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYD  229 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~  229 (246)
                      -...+.+.+.-..+.++|+||+.||..|.+.+++...+-   + ..+.....+|+++.+.+
T Consensus       568 ~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg---~-gtd~ak~aADivl~~~~  624 (885)
T 3b8c_A          568 HKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA---D-ATDAARGASDIVLTEPG  624 (885)
T ss_dssp             HHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS---S-SHHHHGGGCSSCCSSCS
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC---C-ccHHHHHhcceeeccCc
Confidence            344444444333467999999999999999999875553   2 23344456788876544

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=98.13  E-value=2.2e-05  Score=64.16  Aligned_cols=104  Identities=16%  Similarity=0.053  Sum_probs=78.5

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc---------CCCCcceEEEecCCC-----------------
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL---------GLSDFFQVVILGDEC-----------------  160 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~---------~l~~~f~~~~~~~~~-----------------  160 (246)
                      +...|.+..+|++|+++|.++.++||++..+....+..+         .+.++||.|++....                 
T Consensus       185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~  264 (470)
T 4g63_A          185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN  264 (470)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTT
T ss_pred             hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCC
Confidence            345688999999999999999999999998877777653         356899998875310                 


Q ss_pred             C-------CCCCC---hHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHh-cCCCEEEEcCC
Q 025896          161 E-------RAKPF---PDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVA-AGLPVVGLTTR  210 (246)
Q Consensus       161 ~-------~~kp~---~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~-~G~~~i~v~~~  210 (246)
                      +       ..+|.   ......+.+.+|....++++|||+. .||..++. .|+.+++|-..
T Consensus       265 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  326 (470)
T 4g63_A          265 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  326 (470)
T ss_dssp             CCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred             CcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence            0       00110   1125567778899999999999999 89877765 69999999655

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=98.12  E-value=5.4e-07  Score=65.71  Aligned_cols=93  Identities=12%  Similarity=0.160  Sum_probs=74.4

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC-CcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS-DFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      +...||+.++|+++. .++.++|.|++...++..+++.++.. .+|+..+..+......   ..+.+-++.+|.++++|+
T Consensus        58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~~---g~y~KdL~~Lgrdl~~vI  133 (204)
T 3qle_A           58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKD---GVHIKDLSKLNRDLSKVI  133 (204)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEET---TEEECCGGGSCSCGGGEE
T ss_pred             EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEEC---CeeeecHHHhCCChHHEE
Confidence            678899999999998 55999999999999999999999887 5888877665543211   124456777899999999


Q ss_pred             EEecChhhhHHHHhcCCC
Q 025896          186 VFEDSVSGIKAGVAAGLP  203 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~  203 (246)
                      +|+|+.+-+......|+.
T Consensus       134 iIDDsp~~~~~~p~N~I~  151 (204)
T 3qle_A          134 IIDTDPNSYKLQPENAIP  151 (204)
T ss_dssp             EEESCTTTTTTCGGGEEE
T ss_pred             EEECCHHHHhhCccCceE
Confidence            999999888766555643

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=98.02  E-value=6.5e-06  Score=55.48  Aligned_cols=29  Identities=10%  Similarity=0.003  Sum_probs=24.8

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCH
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPR  135 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~  135 (246)
                      ..+.+++.+.|++++++|++++++|+.+.
T Consensus        23 ~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~   51 (126)
T 1xpj_A           23 VLPRLDVIEQLREYHQLGFEIVISTARNM   51 (126)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred             CCCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence            34567788999999999999999999864

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=98.01  E-value=1.3e-06  Score=68.33  Aligned_cols=94  Identities=14%  Similarity=0.105  Sum_probs=64.3

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCc--ceEEEecCCC---C-CCCCChHHHHHHHHHc----
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF--FQVVILGDEC---E-RAKPFPDPYFKALEML----  177 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~---~-~~kp~~~~~~~~~~~~----  177 (246)
                      ...||+.+||+++.+. +.++|.|++...++..+++.++....  |...+..+..   . ..+.....+.+-++.+    
T Consensus       164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~  242 (320)
T 3shq_A          164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALY  242 (320)
T ss_dssp             HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHC
T ss_pred             EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhccc
Confidence            4679999999999976 99999999999999999999877644  2211111111   0 0111111122334444    


Q ss_pred             -CCCCCcEEEEecChhhhHHHHhcCC
Q 025896          178 -KVSKDHTFVFEDSVSGIKAGVAAGL  202 (246)
Q Consensus       178 -~~~~~~~~~igD~~~Di~~a~~~G~  202 (246)
                       |.+++++++|+|++.-..+....|+
T Consensus       243 p~rdl~~tIiIDdsp~~~~~~p~NgI  268 (320)
T 3shq_A          243 KQYNSSNTIMFDDIRRNFLMNPKSGL  268 (320)
T ss_dssp             TTCCGGGEEEEESCGGGGTTSGGGEE
T ss_pred             CCCChhHEEEEeCChHHhccCcCceE
Confidence             7889999999999988877666664

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=97.54  E-value=6.5e-05  Score=59.92  Aligned_cols=92  Identities=16%  Similarity=0.123  Sum_probs=69.4

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC-cce-EEEecCCCCCCCCChHHHHHHHHHc-CCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD-FFQ-VVILGDECERAKPFPDPYFKALEML-KVSKD  182 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~-~f~-~~~~~~~~~~~kp~~~~~~~~~~~~-~~~~~  182 (246)
                      .+...||+.++|+++. .++.++|.|++...++..+++.++... +|+ .+++.+..+.      .+.+-++.+ |.+++
T Consensus        73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~------~~~KdL~~L~~~dl~  145 (372)
T 3ef0_A           73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPCDTS  145 (372)
T ss_dssp             EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSC------SSCCCGGGTCSSCCT
T ss_pred             EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCC------cceecHHHhcCCCCc
Confidence            4678999999999999 559999999999999999999999886 786 5665554432      122335544 88999


Q ss_pred             cEEEEecChhhhHHHHhcCCCEEEEc
Q 025896          183 HTFVFEDSVSGIKAGVAAGLPVVGLT  208 (246)
Q Consensus       183 ~~~~igD~~~Di~~a~~~G~~~i~v~  208 (246)
                      +|++|+|+..-...-   . ..|.+.
T Consensus       146 ~viiiDd~~~~~~~~---p-N~I~i~  167 (372)
T 3ef0_A          146 MVVVIDDRGDVWDWN---P-NLIKVV  167 (372)
T ss_dssp             TEEEEESCSGGGTTC---T-TEEECC
T ss_pred             eEEEEeCCHHHcCCC---C-cEeeeC
Confidence            999999999644332   2 456554

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=97.33  E-value=0.0079  Score=44.44  Aligned_cols=92  Identities=15%  Similarity=0.133  Sum_probs=68.3

Q ss_pred             HHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCCCCcc--eEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEec
Q 025896          113 LDKVKKWIEDR-GLKRAAVTNAPRENAELMISKLGLSDFF--QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFED  189 (246)
Q Consensus       113 ~~~~l~~l~~~-g~~i~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD  189 (246)
                      +.+.|.....+ ...-++||++...-.-.++--.++..+|  +.|+++-.++    +...|+++.+++| +.-.-++|||
T Consensus       164 a~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~kiG----KesCFerI~~RFG-~k~~yvvIGD  238 (274)
T 3geb_A          164 SLKALNLINSRPNCVNVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATKTG----KESCFERIMQRFG-RKAVYVVIGD  238 (274)
T ss_dssp             HHHHHHHHHHSTTEEEEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTTTC----HHHHHHHHHHHHC-TTSEEEEEES
T ss_pred             HHHHHHhhccCCceeEEEEecCchHHHHHHHHHhhcccceecccccchhhcC----HHHHHHHHHHHhC-CCceEEEECC
Confidence            45555555544 3445678888765555555566787777  6677775443    6789999999998 3466889999


Q ss_pred             ChhhhHHHHhcCCCEEEEcC
Q 025896          190 SVSGIKAGVAAGLPVVGLTT  209 (246)
Q Consensus       190 ~~~Di~~a~~~G~~~i~v~~  209 (246)
                      +...-++|+..+++++-++.
T Consensus       239 G~eEe~AAk~~n~PFwrI~~  258 (274)
T 3geb_A          239 GVEEEQGAKKHNMPFWRISC  258 (274)
T ss_dssp             SHHHHHHHHHTTCCEEECCS
T ss_pred             CHHHHHHHHHcCCCeEEeec
Confidence            99999999999999998844

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=96.41  E-value=0.0018  Score=49.70  Aligned_cols=49  Identities=22%  Similarity=0.258  Sum_probs=40.0

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHhcCCC-CcceEEEec
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTN---APRENAELMISKLGLS-DFFQVVILG  157 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~---~~~~~~~~~l~~~~l~-~~f~~~~~~  157 (246)
                      +++++.+.|+++++.|++++++||   .........++.+|+. ..++.++++
T Consensus        31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~~   83 (284)
T 2hx1_A           31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISS   83 (284)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEEH
T ss_pred             eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEcH
Confidence            357888999999999999999998   4566778888999987 666666654

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=96.40  E-value=0.0057  Score=49.68  Aligned_cols=92  Identities=15%  Similarity=0.116  Sum_probs=66.4

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC-cceE-EEecCCCCCCCCChHHHHHHHHH-cCCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD-FFQV-VILGDECERAKPFPDPYFKALEM-LKVSKD  182 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~~kp~~~~~~~~~~~-~~~~~~  182 (246)
                      .+...||+.+||+++.+ .+.++|.|.+...++..+++.++... +|.. +++.+..+..      +.+=+.+ +|.+.+
T Consensus        81 ~V~~RPgl~eFL~~ls~-~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~------~~KdL~~ll~rdl~  153 (442)
T 3ef1_A           81 YIKFRPGLAQFLQKISE-LYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL------AQKSLRRLFPCDTS  153 (442)
T ss_dssp             EEEECTTHHHHHHHHTT-TEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSCS------SCCCGGGTCSSCCT
T ss_pred             EEEeCCCHHHHHHHHhC-CcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCCc------eeeehHHhcCCCcc
Confidence            46789999999999985 59999999999999999999998775 6765 5545544321      1112333 478889


Q ss_pred             cEEEEecChhhhHHHHhcCCCEEEEc
Q 025896          183 HTFVFEDSVSGIKAGVAAGLPVVGLT  208 (246)
Q Consensus       183 ~~~~igD~~~Di~~a~~~G~~~i~v~  208 (246)
                      ++++|+|+..-... .  . ..|.+.
T Consensus       154 ~vvIIDd~p~~~~~-~--p-N~I~I~  175 (442)
T 3ef1_A          154 MVVVIDDRGDVWDW-N--P-NLIKVV  175 (442)
T ss_dssp             TEEEEESCSGGGTT-C--T-TEEECC
T ss_pred             eEEEEECCHHHhCC-C--C-CEEEcC
Confidence            99999999853322 1  3 555554

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=96.32  E-value=0.017  Score=45.90  Aligned_cols=85  Identities=16%  Similarity=0.126  Sum_probs=59.2

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHH-hcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAP---RENAELMIS-KLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~---~~~~~~~l~-~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      +.||+.++|+.|++.|++++++||++   .......+. .+|+.--.+.++++......         .++    ....+
T Consensus        30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~---------~~~----~~~~v   96 (352)
T 3kc2_A           30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKS---------LVN----KYSRI   96 (352)
T ss_dssp             ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGG---------GTT----TCSEE
T ss_pred             eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHH---------HHh----cCCEE
Confidence            56899999999999999999999985   344445555 68887556777766432111         111    23567


Q ss_pred             EEEecChhhhHHHHhcCCCEEEE
Q 025896          185 FVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      ++||-. .-.+.++++|+..+..
T Consensus        97 ~viG~~-~l~~~l~~~G~~~v~~  118 (352)
T 3kc2_A           97 LAVGTP-SVRGVAEGYGFQDVVH  118 (352)
T ss_dssp             EEESST-THHHHHHHHTCSEEEE
T ss_pred             EEECCH-HHHHHHHhCCCeEecc
Confidence            788755 5667788899987753

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=95.18  E-value=0.07  Score=40.23  Aligned_cols=83  Identities=18%  Similarity=0.233  Sum_probs=54.2

Q ss_pred             ccHHHHHHHHHHcCCeEEEEeCCCH---HHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 025896          111 SGLDKVKKWIEDRGLKRAAVTNAPR---ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF  187 (246)
Q Consensus       111 ~~~~~~l~~l~~~g~~i~i~s~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~i  187 (246)
                      +++.+.|+++++.|++++++||++.   ......+..+|+....+.++++.         ......+++. ....++.++
T Consensus        20 ~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~---------~~~~~~l~~~-~~~~~v~vi   89 (263)
T 1zjj_A           20 PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSG---------LATRLYMSKH-LDPGKIFVI   89 (263)
T ss_dssp             TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHH---------HHHHHHHHHH-SCCCCEEEE
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecH---------HHHHHHHHHh-CCCCEEEEE
Confidence            6788999999999999999999865   33445555678764445555432         1233344443 223567788


Q ss_pred             ecChhhhHHHHhcCCCE
Q 025896          188 EDSVSGIKAGVAAGLPV  204 (246)
Q Consensus       188 gD~~~Di~~a~~~G~~~  204 (246)
                      |.. .....++..|+..
T Consensus        90 G~~-~l~~~l~~~G~~~  105 (263)
T 1zjj_A           90 GGE-GLVKEMQALGWGI  105 (263)
T ss_dssp             SCH-HHHHHHHHHTSCB
T ss_pred             cCH-HHHHHHHHcCCee
Confidence            774 5666777777743

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=94.83  E-value=0.047  Score=41.18  Aligned_cols=49  Identities=20%  Similarity=0.135  Sum_probs=39.2

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHhcCCCCcceEEEec
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTN---APRENAELMISKLGLSDFFQVVILG  157 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~~  157 (246)
                      +.|++.+.|++++++|++++++||   .+...+...++.+|+....+.++++
T Consensus        25 ~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~   76 (268)
T 3qgm_A           25 PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVA   76 (268)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEH
T ss_pred             eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCH
Confidence            456788999999999999999999   5667777888888987555556543

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=93.59  E-value=0.12  Score=38.95  Aligned_cols=46  Identities=15%  Similarity=0.138  Sum_probs=35.9

Q ss_pred             ccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHhcCCCCcceEEEe
Q 025896          111 SGLDKVKKWIEDRGLKRAAVTN---APRENAELMISKLGLSDFFQVVIL  156 (246)
Q Consensus       111 ~~~~~~l~~l~~~g~~i~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~  156 (246)
                      |++.++|++++++|++++++||   .+...+...+..+|+....+.+++
T Consensus        25 ~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~   73 (266)
T 3pdw_A           25 EEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFT   73 (266)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEE
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccC
Confidence            4577999999999999999998   556677788888888644444443

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=92.99  E-value=0.14  Score=38.60  Aligned_cols=46  Identities=13%  Similarity=0.273  Sum_probs=36.9

Q ss_pred             ccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHhcCCCCcceEEEe
Q 025896          111 SGLDKVKKWIEDRGLKRAAVTN---APRENAELMISKLGLSDFFQVVIL  156 (246)
Q Consensus       111 ~~~~~~l~~l~~~g~~i~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~  156 (246)
                      |++.++|++++++|++++++||   .+...+...++.+|+....+.+++
T Consensus        24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~   72 (264)
T 3epr_A           24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYT   72 (264)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEE
T ss_pred             cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheec
Confidence            6788999999999999999995   456677788888888755555554

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=91.61  E-value=0.31  Score=36.99  Aligned_cols=39  Identities=8%  Similarity=0.075  Sum_probs=34.5

Q ss_pred             ccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          111 SGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       111 ~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      +...+.|++|+++|++++++|+++...++..++.+++..
T Consensus        29 ~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   67 (275)
T 1xvi_A           29 QPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG   67 (275)
T ss_dssp             CTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence            446799999999999999999999999999999988764

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=91.52  E-value=0.36  Score=36.73  Aligned_cols=40  Identities=13%  Similarity=0.191  Sum_probs=34.5

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      .+...+.|++++++|+.++++|+++...+...++.+++..
T Consensus        24 ~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~   63 (282)
T 1rkq_A           24 SPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ   63 (282)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence            3556789999999999999999999988888888888764

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=90.98  E-value=0.43  Score=36.71  Aligned_cols=47  Identities=17%  Similarity=0.263  Sum_probs=36.1

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHhcCCC-CcceEEE
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTN---APRENAELMISKLGLS-DFFQVVI  155 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~---~~~~~~~~~l~~~~l~-~~f~~~~  155 (246)
                      ++|++.+.|++|++.|++++++||   .........++.+|+. ...+.++
T Consensus        38 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~~~i~   88 (306)
T 2oyc_A           38 AVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLF   88 (306)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCGGGEE
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCChhhEE
Confidence            346788999999999999999997   4556677788888886 3344444

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=90.96  E-value=0.18  Score=40.41  Aligned_cols=20  Identities=30%  Similarity=0.649  Sum_probs=16.4

Q ss_pred             cceEEEeCCCccccChhhHH
Q 025896           22 LEAVLFDVDGTLCDSDPLHH   41 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~   41 (246)
                      +|.|+||+|||+++....+.
T Consensus         1 ~~~~~fdvdgv~~~~~~~~d   20 (384)
T 1qyi_A            1 MKKILFDVDGVFLSEERCFD   20 (384)
T ss_dssp             CCEEEECSBTTTBCSHHHHH
T ss_pred             CceEEEecCceeechhhhcc
Confidence            58999999999998775443

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=89.70  E-value=0.57  Score=34.40  Aligned_cols=42  Identities=19%  Similarity=0.043  Sum_probs=36.5

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      .+.+...+.|++++++|++++++|+.+.......++.+++..
T Consensus        20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~   61 (231)
T 1wr8_A           20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG   61 (231)
T ss_dssp             CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC
Confidence            456788999999999999999999999988888888887753

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=89.43  E-value=0.43  Score=35.53  Aligned_cols=36  Identities=14%  Similarity=0.194  Sum_probs=32.1

Q ss_pred             HHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC
Q 025896          113 LDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS  148 (246)
Q Consensus       113 ~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~  148 (246)
                      +.+.|++|+++|++++++|+++...+...++.+++.
T Consensus        22 ~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~   57 (249)
T 2zos_A           22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE   57 (249)
T ss_dssp             GHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            557899999999999999999999898888888875

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=89.36  E-value=0.23  Score=35.74  Aligned_cols=18  Identities=33%  Similarity=0.409  Sum_probs=15.7

Q ss_pred             CCcceEEEeCCCccccCh
Q 025896           20 APLEAVLFDVDGTLCDSD   37 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~   37 (246)
                      ..-+++++|+||||+++.
T Consensus        26 ~~k~~LVLDLD~TLvhs~   43 (195)
T 2hhl_A           26 YGKKCVVIDLDETLVHSS   43 (195)
T ss_dssp             TTCCEEEECCBTTTEEEE
T ss_pred             CCCeEEEEccccceEccc
Confidence            457899999999999965

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=88.84  E-value=1.2  Score=33.49  Aligned_cols=40  Identities=10%  Similarity=0.162  Sum_probs=34.8

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      .+...+.|+++++.|+.++++|+.+...+...++.+++..
T Consensus        24 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   63 (279)
T 3mpo_A           24 AQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDG   63 (279)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCS
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence            3456788999999999999999999999999999988764

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=88.69  E-value=0.87  Score=34.09  Aligned_cols=39  Identities=10%  Similarity=0.172  Sum_probs=32.1

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHhcCCC
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTN---APRENAELMISKLGLS  148 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~---~~~~~~~~~l~~~~l~  148 (246)
                      .+++.+.++++++.|++++++||   .....+...++.+|+.
T Consensus        35 ~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~   76 (271)
T 1vjr_A           35 LPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD   76 (271)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred             CcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence            36788999999999999999994   4566777788888875

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=87.39  E-value=0.54  Score=35.73  Aligned_cols=40  Identities=15%  Similarity=0.172  Sum_probs=34.8

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      .+...+.|++++++|+.++++|+.+...+...++.+++..
T Consensus        40 ~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~   79 (285)
T 3pgv_A           40 TPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRS   79 (285)
T ss_dssp             CHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCC
T ss_pred             CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCc
Confidence            3457789999999999999999999988888898888863

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=87.15  E-value=0.24  Score=35.13  Aligned_cols=19  Identities=26%  Similarity=0.279  Sum_probs=15.9

Q ss_pred             cCCcceEEEeCCCccccCh
Q 025896           19 LAPLEAVLFDVDGTLCDSD   37 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~   37 (246)
                      ...-+++++|+|+||+++.
T Consensus        12 ~~~k~~LVLDLD~TLvhs~   30 (181)
T 2ght_A           12 DSDKICVVINLDETLVHSS   30 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEE
T ss_pred             cCCCeEEEECCCCCeECCc
Confidence            3456899999999999865

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=86.98  E-value=0.19  Score=40.10  Aligned_cols=18  Identities=17%  Similarity=0.300  Sum_probs=15.9

Q ss_pred             CCcceEEEeCCCccccCh
Q 025896           20 APLEAVLFDVDGTLCDSD   37 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~   37 (246)
                      .+.++++||+||||+++.
T Consensus        16 ~~k~~LVlDLD~TLvhS~   33 (372)
T 3ef0_A           16 EKRLSLIVDLDQTIIHAT   33 (372)
T ss_dssp             HTCEEEEECCBTTTEEEE
T ss_pred             CCCCEEEEcCCCCccccc
Confidence            467899999999999985

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=86.93  E-value=1.5  Score=32.88  Aligned_cols=40  Identities=13%  Similarity=0.168  Sum_probs=34.9

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS  148 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~  148 (246)
                      +.+...+.|++++++|+.++++|+.+...+...++.+++.
T Consensus        23 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   62 (279)
T 4dw8_A           23 ISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMN   62 (279)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGG
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCC
Confidence            3456788999999999999999999999999999988874

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=86.90  E-value=0.56  Score=36.12  Aligned_cols=40  Identities=13%  Similarity=-0.005  Sum_probs=33.9

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH--HhcC-CC
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI--SKLG-LS  148 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l--~~~~-l~  148 (246)
                      +.+...+.|++|+++|+.++++|+++...+...+  +.++ +.
T Consensus        46 is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~   88 (301)
T 2b30_A           46 VPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMN   88 (301)
T ss_dssp             SCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHT
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccc
Confidence            3456778999999999999999999998888888  7777 64

>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*

Probab=86.80  E-value=2.7  Score=31.42  Aligned_cols=105  Identities=18%  Similarity=0.145  Sum_probs=61.2

Q ss_pred             HHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHH----cCCCCCcEEEEec
Q 025896          114 DKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEM----LKVSKDHTFVFED  189 (246)
Q Consensus       114 ~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~----~~~~~~~~~~igD  189 (246)
                      .++++++++.+.+++++|+..........-+.|..+|+           .||.+..+..+...    ..-..-+++.|+|
T Consensus        64 ~~~~~~lr~~~~pvi~lt~~~~~~~~~~a~~~Ga~dyl-----------~Kp~~~~~~~~~~~~~~~~~~~~~~ILivDD  132 (259)
T 3luf_A           64 GEAVKVLLERGLPVVILTADISEDKREAWLEAGVLDYV-----------MKDSRHSLQYAVGLVHRLYLNQQIEVLVVDD  132 (259)
T ss_dssp             SHHHHHHHHTTCCEEEEECC-CHHHHHHHHHTTCCEEE-----------ECSSHHHHHHHHHHHHHHHHHTTCEEEEECS
T ss_pred             HHHHHHHHhCCCCEEEEEccCCHHHHHHHHHCCCcEEE-----------eCCchhHHHHHHHhhhhHhhcCCCcEEEEeC
Confidence            47788888888999999998766555555566765432           34443333222221    1224567999999


Q ss_pred             ChhhhHH----HHhcCCCEEEEcCCCChhhhhc-c-CCcEEecCCC
Q 025896          190 SVSGIKA----GVAAGLPVVGLTTRNPEHVLLE-A-NPTFLIKDYD  229 (246)
Q Consensus       190 ~~~Di~~----a~~~G~~~i~v~~~~~~~~~~~-~-~~~~~i~~~~  229 (246)
                      .......    .+..|..+..+..+...-+... . .++.++-++.
T Consensus       133 ~~~~~~~l~~~L~~~~~~v~~a~~~~eal~~l~~~~~~dlvllD~~  178 (259)
T 3luf_A          133 SRTSRHRTMAQLRKQLLQVHEASHAREALATLEQHPAIRLVLVDYY  178 (259)
T ss_dssp             CHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHCTTEEEEEECSC
T ss_pred             CHHHHHHHHHHHHHcCcEEEEeCCHHHHHHHHhcCCCCCEEEEcCC
Confidence            9865443    3445776666655543333332 2 2567765543

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=86.24  E-value=1.3  Score=33.69  Aligned_cols=40  Identities=10%  Similarity=0.136  Sum_probs=34.1

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      .+...+.++++++.|++++++|+.+...+...++.+++..
T Consensus        23 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   62 (288)
T 1nrw_A           23 SLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT   62 (288)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred             CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence            3556788999999999999999999998888888887753

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=86.24  E-value=2  Score=34.40  Aligned_cols=92  Identities=15%  Similarity=0.174  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHc-CCeEE-EEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCCh----HH---HHHHHHHcCCCCCc
Q 025896          113 LDKVKKWIEDR-GLKRA-AVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFP----DP---YFKALEMLKVSKDH  183 (246)
Q Consensus       113 ~~~~l~~l~~~-g~~i~-i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~----~~---~~~~~~~~~~~~~~  183 (246)
                      ...+++.|++. ++.+. ++|+.........++.+++..-++.-+    .+.+.+..    ..   +.+++++  .+|+=
T Consensus        41 ~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~--~kPDv  114 (396)
T 3dzc_A           41 MAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNI----MEPGQTLNGVTSKILLGMQQVLSS--EQPDV  114 (396)
T ss_dssp             HHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCC----CCTTCCHHHHHHHHHHHHHHHHHH--HCCSE
T ss_pred             HHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeeec----CCCCCCHHHHHHHHHHHHHHHHHh--cCCCE
Confidence            35678888876 67774 677766556777778888853222111    11111111    11   2233333  46787


Q ss_pred             EEEEecChhh---hHHHHhcCCCEEEEcCC
Q 025896          184 TFVFEDSVSG---IKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       184 ~~~igD~~~D---i~~a~~~G~~~i~v~~~  210 (246)
                      ++.+||...-   ..+|+..|++++.+..+
T Consensus       115 Vi~~g~~~~~~~~~~aa~~~~IPv~h~~ag  144 (396)
T 3dzc_A          115 VLVHGDTATTFAASLAAYYQQIPVGHVEAG  144 (396)
T ss_dssp             EEEETTSHHHHHHHHHHHTTTCCEEEETCC
T ss_pred             EEEECCchhHHHHHHHHHHhCCCEEEEECC
Confidence            8888988753   45778889999988654

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=84.59  E-value=1.8  Score=32.75  Aligned_cols=39  Identities=18%  Similarity=0.267  Sum_probs=34.2

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS  148 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~  148 (246)
                      .+...+.|++++++|+.++++|+.+...+...++.+++.
T Consensus        25 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~   63 (290)
T 3dnp_A           25 HQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLD   63 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence            345778999999999999999999998888888888876

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=84.19  E-value=1.5  Score=32.85  Aligned_cols=38  Identities=5%  Similarity=-0.262  Sum_probs=32.8

Q ss_pred             ccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          111 SGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       111 ~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      +...+.|++ +++|++++++|+++...+...++.+++..
T Consensus        22 ~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~   59 (268)
T 1nf2_A           22 EKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRT   59 (268)
T ss_dssp             HHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSC
T ss_pred             HHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCC
Confidence            446788888 89999999999999999999888888754

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=84.07  E-value=1.6  Score=32.46  Aligned_cols=33  Identities=9%  Similarity=0.044  Sum_probs=26.7

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI  142 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l  142 (246)
                      .+...+.|++|+++|++++++|+++...+...+
T Consensus        23 ~~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l   55 (246)
T 3f9r_A           23 TDEMRALIKRARGAGFCVGTVGGSDFAKQVEQL   55 (246)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHh
Confidence            355778899999999999999999887654443

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=83.80  E-value=1.1  Score=33.90  Aligned_cols=40  Identities=8%  Similarity=-0.002  Sum_probs=33.9

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCC
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLS  148 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~  148 (246)
                      +.+...+.|++++++|+.++++|+.+...+...+..++..
T Consensus        40 i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~   79 (283)
T 3dao_A           40 IDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHK   79 (283)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGG
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence            3456778999999999999999999999888888877654

>2nn4_A Hypothetical protein YQGQ; novel fold, PFAM:DUF910, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.272.1.1

Probab=83.77  E-value=0.3  Score=28.49  Aligned_cols=25  Identities=16%  Similarity=0.077  Sum_probs=21.9

Q ss_pred             HHHHHHHcCCCCCcEEEEecChhhhHHHH
Q 025896          170 YFKALEMLKVSKDHTFVFEDSVSGIKAGV  198 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~igD~~~Di~~a~  198 (246)
                      ++++++++|+    ++++||...|+++..
T Consensus         8 VqQLLK~fG~----~IY~GdR~~DielM~   32 (72)
T 2nn4_A            8 VQQLLKTFGH----IVYFGDRELEIEFML   32 (72)
T ss_dssp             HHHHHHTTTC----CCCCSCHHHHHHHHH
T ss_pred             HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence            5689999998    899999999998765

>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}

Probab=83.00  E-value=6.3  Score=28.13  Aligned_cols=89  Identities=9%  Similarity=0.062  Sum_probs=54.0

Q ss_pred             ccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEec
Q 025896          111 SGLDKVKKWIEDRGLKRAAVTNAPRE-NAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFED  189 (246)
Q Consensus       111 ~~~~~~l~~l~~~g~~i~i~s~~~~~-~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD  189 (246)
                      .++...|..+++.+-++++++-.+.. ..+.+.+.+++.  +.........     .......-++.-|+    -++|||
T Consensus        81 ~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~--i~~~~~~~~~-----e~~~~i~~l~~~G~----~vvVG~  149 (196)
T 2q5c_A           81 FDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVK--IKEFLFSSED-----EITTLISKVKTENI----KIVVSG  149 (196)
T ss_dssp             HHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCE--EEEEEECSGG-----GHHHHHHHHHHTTC----CEEEEC
T ss_pred             hHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCc--eEEEEeCCHH-----HHHHHHHHHHHCCC----eEEECC
Confidence            35677777888888899998765432 344444555654  2222211100     11222233334465    368998


Q ss_pred             ChhhhHHHHhcCCCEEEEcCCC
Q 025896          190 SVSGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       190 ~~~Di~~a~~~G~~~i~v~~~~  211 (246)
                      +.. ...|++.|++++++..+.
T Consensus       150 ~~~-~~~A~~~Gl~~vli~sg~  170 (196)
T 2q5c_A          150 KTV-TDEAIKQGLYGETINSGE  170 (196)
T ss_dssp             HHH-HHHHHHTTCEEEECCCCH
T ss_pred             HHH-HHHHHHcCCcEEEEecCH
Confidence            776 788999999999997763

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=82.06  E-value=1.3  Score=32.65  Aligned_cols=38  Identities=16%  Similarity=0.036  Sum_probs=32.0

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL  145 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~  145 (246)
                      ..+.+...+.|++|+++| .++++|+++...+...+..+
T Consensus        22 ~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l   59 (239)
T 1u02_A           22 SYADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD   59 (239)
T ss_dssp             CCCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS
T ss_pred             CCCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc
Confidence            346677889999999999 99999999988888776654

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=81.87  E-value=1.4  Score=32.66  Aligned_cols=42  Identities=14%  Similarity=0.093  Sum_probs=35.1

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      .+.+...+.|++++++|++++++|+++.......+..+++..
T Consensus        20 ~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~   61 (258)
T 2pq0_A           20 QLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDS   61 (258)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCE
Confidence            456778899999999999999999998887777788777653

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=81.46  E-value=0.88  Score=34.25  Aligned_cols=34  Identities=12%  Similarity=0.040  Sum_probs=28.6

Q ss_pred             HHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCC
Q 025896          114 DKVKKWIEDRGLKRAAVTNAPRENAELMISKLGL  147 (246)
Q Consensus       114 ~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l  147 (246)
                      .+.|++|+++|++++++|+++...+...+..+++
T Consensus        27 ~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   60 (271)
T 1rlm_A           27 MAQYQELKKRGIKFVVASGNQYYQLISFFPELKD   60 (271)
T ss_dssp             HHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTT
T ss_pred             HHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcCC
Confidence            5888999999999999999998887777666654

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=80.98  E-value=0.57  Score=33.92  Aligned_cols=19  Identities=11%  Similarity=0.102  Sum_probs=16.0

Q ss_pred             CCcceEEEeCCCccccChh
Q 025896           20 APLEAVLFDVDGTLCDSDP   38 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~   38 (246)
                      ...+++++|+|+||+.+..
T Consensus        32 ~~~~tLVLDLDeTLvh~~~   50 (204)
T 3qle_A           32 QRPLTLVITLEDFLVHSEW   50 (204)
T ss_dssp             CCSEEEEEECBTTTEEEEE
T ss_pred             CCCeEEEEeccccEEeeec
Confidence            4568999999999999753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	246
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	1e-22
d2fdra1	222	c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {	2e-22
d2hsza1	224	c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G	2e-20
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	2e-19
d1swva_	257	c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba	5e-19
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	5e-19
d2hcfa1	228	c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C	3e-18
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	4e-18
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	5e-18
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	1e-17
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	2e-17
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	2e-17
d2ah5a1	210	c.108.1.6 (A:1-210) predicted phosphatase SP0104 {	4e-16
d1zrna_	220	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse	4e-16
d2gfha1	247	c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas	6e-15
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	6e-15
d2hdoa1	207	c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {	2e-14
d1x42a1	230	c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A	2e-14
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	4e-14
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	2e-13
d2feaa1	226	c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio	6e-11
d1j97a_	210	c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon	3e-07
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	3e-07
d1nnla_	217	c.108.1.4 (A:) Phosphoserine phosphatase {Human (H	6e-06
d2c4na1	250	c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId	1e-05
d1ltqa1	149	c.108.1.9 (A:153-301) Polynucleotide kinase, phosp	2e-04
d1rkua_	206	c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona	0.001
d1vjra_	261	c.108.1.14 (A:) Hypothetical protein TM1742 {Therm	0.001
d2o2xa1	209	c.108.1.19 (A:8-216) Hypothetical protein Mll2559	0.002
d2fpwa1	161	c.108.1.19 (A:3-163) Histidine biosynthesis bifunc	0.003

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 90.3 bits (222), Expect = 1e-22
 Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 7/212 (3%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           + A +FD+DG L DS+PL   A  +++  +    GV I+    + +  G     +  + +
Sbjct: 3   ILAAIFDMDGLLIDSEPLWDRAELDVMASL----GVDISRRNELPDTLGLRIDMVVDLWY 58

Query: 82  PDDLPRGLKFCEDKE---AMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENA 138
                 G    E  E   A    L  E    + G+ +     +++GL     + +P    
Sbjct: 59  ARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHML 118

Query: 139 ELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGV 198
           E +++   L D F  +   ++   +KP P  Y      L V        EDSV+G+ A  
Sbjct: 119 EKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASK 178

Query: 199 AAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD 230
           AA +  + +     ++          +    +
Sbjct: 179 AARMRSIVVPAPEAQNDPRFVLANVKLSSLTE 210

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 89.9 bits (221), Expect = 2e-22
 Identities = 48/224 (21%), Positives = 81/224 (36%), Gaps = 11/224 (4%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGK-HNIDIAKILF 81
           + ++FD DG L DS+ +       +L E G+    PI+ +   E  AG      + ++  
Sbjct: 3   DLIIFDCDGVLVDSEIIAAQVESRLLTEAGY----PISVEEMGERFAGMTWKNILLQVES 58

Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELM 141
              +P      +  E +        +K I G+      +       +  ++   +     
Sbjct: 59  EASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK 118

Query: 142 ISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAG 201
           +                  +R KP PD +        VS D   V EDSV GI    AAG
Sbjct: 119 VGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAG 178

Query: 202 LPVVGLTTR-----NPEHVLLEANPTFLIKDYDD-PKLWSALEE 239
           + V+G T       +    L +A    +I    D P + +A+ E
Sbjct: 179 MRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAAMAE 222

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

 Score = 84.6 bits (207), Expect = 2e-20
 Identities = 41/216 (18%), Positives = 86/216 (39%), Gaps = 12/216 (5%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD 83
            + FD+DGTL +S P    +    L+++        +E+  +  I    ++   + +   
Sbjct: 6   LIGFDLDGTLVNSLPDLALSINSALKDVNLP---QASENLVMTWIGNGADVLSQRAVDWA 62

Query: 84  DLPRGLKFCEDK--------EAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPR 135
                 +  ED+           + +      +    + +  + ++ +G   A VTN P 
Sbjct: 63  CKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPT 122

Query: 136 ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK 195
           ++ + +++  G+   F  ++ G      KP P P++       +         DS + I 
Sbjct: 123 KHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIF 182

Query: 196 AGVAAGLPVVGLTT-RNPEHVLLEANPTFLIKDYDD 230
           A  +AG  VVGLT   N    + ++ P ++  D+ D
Sbjct: 183 AAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFAD 218

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 81.0 bits (198), Expect = 2e-19
 Identities = 27/190 (14%), Positives = 61/190 (32%), Gaps = 5/190 (2%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNI-DIAKILFPD 83
            +FD+   + D D          L  I       + + F +     +H   +I+   F +
Sbjct: 3   YIFDLGNVIVDIDFNRVLGAWSDLTRIPLAS---LKKSFHMGEAFHQHERGEISDEAFAE 59

Query: 84  DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMIS 143
            L   +      E       +  +     +  +   + ++G +   ++N  R +      
Sbjct: 60  ALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPE 119

Query: 144 KL-GLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGL 202
           +   + D    + L  +    KP    Y   L+    S   T  F+D+   I+     G+
Sbjct: 120 EYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGI 179

Query: 203 PVVGLTTRNP 212
             + +  +  
Sbjct: 180 TSILVKDKTT 189

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

 Score = 81.4 bits (199), Expect = 5e-19
 Identities = 53/263 (20%), Positives = 95/263 (36%), Gaps = 49/263 (18%)

Query: 22  LEAVLFDVDGTLCDSDPLHHY-AFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL 80
           +EAV+F   GT  D         F E+  +     GV IT +   + + G   ID  + L
Sbjct: 2   IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKR----GVAITAEEARKPM-GLLKIDHVRAL 56

Query: 81  FPDDLPRGL---------------KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGL 125
                                   +  E+ E +   +      PI+G+ +V   + +RG+
Sbjct: 57  TEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGI 116

Query: 126 KRAAVTNAPRENAELMISKLGLSDFFQVVIL-GDECERAKPFPDPYFKALEMLKV-SKDH 183
           K  + T   RE  +++  +  L  +    ++  D+    +P+P   +K    L V   +H
Sbjct: 117 KIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH 176

Query: 184 TFVFEDSVSGIKAGVAAGLPVVGLTT------------------------RNPEHVLLEA 219
                D+VS +K G  AG+  VG+                              +  +E 
Sbjct: 177 MIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVEN 236

Query: 220 NPTFLIKDYDDPKLWSALEELDK 242
              F I+   +  L S +E ++K
Sbjct: 237 GAHFTIETMQE--LESVMEHIEK 257

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 81.0 bits (198), Expect = 5e-19
 Identities = 31/247 (12%), Positives = 66/247 (26%), Gaps = 36/247 (14%)

Query: 20  APLEAVLFDVDGTLCDSDPLHHYAF---REMLQEIGFNDGVPITEDFFVENIAGKHNIDI 76
           A +  +L D++GT      +    F    E ++E              V  +  +   D 
Sbjct: 5   AEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDA 64

Query: 77  AKILFPDDLPRGLKFCEDKEAMFRKLASE------------------------------- 105
                           +D + M + +                                  
Sbjct: 65  HLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRM 124

Query: 106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILG-DECERAK 164
           + +  + +    +   + G+K    ++   E  +L+       D  ++V    D     K
Sbjct: 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHK 184

Query: 165 PFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLT-TRNPEHVLLEANPTF 223
              + Y K  + +  S ++     D      A   A + V  +    N      E     
Sbjct: 185 VESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYS 244

Query: 224 LIKDYDD 230
           LI  + +
Sbjct: 245 LITSFSE 251

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

 Score = 78.7 bits (192), Expect = 3e-18
 Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 10/224 (4%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAG--KHNIDIAKILFP 82
           VLFD+DGTL   + ++     + L E+   +G   + DF  +         +    +   
Sbjct: 5   VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERA 64

Query: 83  DDLPRGLKFCEDKEAMFRKLAS-EQLKPISG-LDKVKKWIEDRGLKRAAVTNAPRENAEL 140
           +   +  K  E   A+FR+ A  E +  + G  + +        +    +T     +   
Sbjct: 65  EIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRH 124

Query: 141 MISKLGLSDFFQVVILGDECERAKPFPDPYFKA---LEMLKVSKDHTFVFEDSVSGIKAG 197
            +   G+  +F      D+       P    +    +     S     +  D+   I+  
Sbjct: 125 KLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCA 184

Query: 198 VAAGLPVVGLTT-RNPEHVLLEANPTFLIKDYDDPKLWSALEEL 240
                  + + T       L    P  L K++ +      L  +
Sbjct: 185 RELDARSIAVATGNFTMEELARHKPGTLFKNFAE--TDEVLASI 226

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 78.0 bits (190), Expect = 4e-18
 Identities = 41/225 (18%), Positives = 81/225 (36%), Gaps = 7/225 (3%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
            +AVLFD+DG + D+   H  A++ + +EIG N       +             I  +  
Sbjct: 2   FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLAD 61

Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELM 141
                   K    ++        + + P      + + ++D    +  +  A        
Sbjct: 62  KKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPF 121

Query: 142 I-SKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAA 200
           +  ++ L+ +F  +    E   +KP PD +  A   + V+   +   EDS +GI+A   +
Sbjct: 122 LLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDS 181

Query: 201 GLPVVGLTTRNPEHVLLEANPTFLIKDYDD-PKLWSALEELDKNK 244
           G   +G+         +   P       +   ++W     L K K
Sbjct: 182 GALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVW-----LQKQK 221

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 78.3 bits (191), Expect = 5e-18
 Identities = 45/226 (19%), Positives = 76/226 (33%), Gaps = 3/226 (1%)

Query: 24  AVLFDVDGTLCDSDPLHH---YAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL 80
           AV+FD  GTL D   +      A+    + I         E  ++  + G++    +   
Sbjct: 4   AVVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTR 63

Query: 81  FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAEL 140
                  G    E  E+    +A    +     D  +   E   LKRA ++N   +  + 
Sbjct: 64  EALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQA 123

Query: 141 MISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAA 200
           +++  GL+D F  VI  D     KP PD Y    E+L V+         +   +      
Sbjct: 124 LVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNF 183

Query: 201 GLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNKDA 246
           G  V  +   + E +  E     +        L    E   +  D 
Sbjct: 184 GFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDF 229

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.1 bits (188), Expect = 1e-17
 Identities = 34/213 (15%), Positives = 58/213 (27%), Gaps = 15/213 (7%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF 81
           L A +FD+DG L            E    +         +    E    +       +  
Sbjct: 2   LRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQ 61

Query: 82  PDDLPRGLKFCEDKEA-----------MFRKLASEQLKPISGLDKVKKWIEDRGLKRAAV 130
              L         + A                A    K    + +    +  +G   A +
Sbjct: 62  WIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAIL 121

Query: 131 TNAPREN----AELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV 186
           TN   ++      L      L   F  +I   +    KP P  Y   L+ LK S      
Sbjct: 122 TNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVF 181

Query: 187 FEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEA 219
            +D  + +K     G+  + +   +     LE 
Sbjct: 182 LDDIGANLKPARDLGMVTILVQDTDTALKELEK 214

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.4 bits (186), Expect = 2e-17
 Identities = 21/223 (9%), Positives = 59/223 (26%), Gaps = 17/223 (7%)

Query: 23  EAVLFDVDGTLCDSDPLHH----YAFREMLQEIGFNDGVPITEDF-----------FVEN 67
              L D++GT+C    +      Y   ++ Q +  +       +               +
Sbjct: 4   STYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAH 63

Query: 68  IAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKR 127
           I      D+   +             +   +   + ++ +  I    +V  +       +
Sbjct: 64  ILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKAQ 123

Query: 128 AAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVF 187
             +    ++        L L+ +       +     K     Y   L  +          
Sbjct: 124 KLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTS-GKKTETQSYANILRDIGAKASEVLFL 182

Query: 188 EDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD 230
            D+   + A    G+      +R     + +     + K+++ 
Sbjct: 183 SDNPLELDAAAGVGIATGLA-SRPGNAPVPDGQKYQVYKNFET 224

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 76.3 bits (186), Expect = 2e-17
 Identities = 33/203 (16%), Positives = 54/203 (26%), Gaps = 19/203 (9%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFND-------GVPITEDFFVENIAGKHNIDI 76
              FD+DG L         AFR   + +                E    + + GK     
Sbjct: 2   VAAFDLDGVLALPSIAG--AFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQ 59

Query: 77  AKILFPDDLPRGLKFC------EDKEAMFRKLASEQLKPISG----LDKVKKWIEDRGLK 126
              L  +   +  K C          +     A                +KK      + 
Sbjct: 60  WVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCIV 119

Query: 127 RAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV 186
                +   +   L      LS  F  +I   +    KP P  Y   L+ LK   +    
Sbjct: 120 TNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVF 179

Query: 187 FEDSVSGIKAGVAAGLPVVGLTT 209
            +D  S +K     G+  + +  
Sbjct: 180 LDDFGSNLKPARDMGMVTILVHN 202

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 72.6 bits (176), Expect = 4e-16
 Identities = 27/213 (12%), Positives = 64/213 (30%), Gaps = 10/213 (4%)

Query: 19  LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAK 78
           +  + A+ FD+DGTL DS    H AF    +E+G                  +  +    
Sbjct: 1   MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVP---SPDAKTI------RGFMGPPL 51

Query: 79  ILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENA 138
                      +  E  +       ++ +       ++   +E+            ++ +
Sbjct: 52  ESSFATCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTS 111

Query: 139 ELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGV 198
                   L        +      A    D   +AL+  +++ +   +  D+   +    
Sbjct: 112 TAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGAR 171

Query: 199 AAGLPVVGLTTR-NPEHVLLEANPTFLIKDYDD 230
             G+  + +T     +  LL   P ++     +
Sbjct: 172 ETGIQKLAITWGFGEQADLLNYQPDYIAHKPLE 204

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

 Score = 72.6 bits (176), Expect = 4e-16
 Identities = 32/217 (14%), Positives = 66/217 (30%), Gaps = 15/217 (6%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIA----------GKHN 73
            + FD+ GTL D   +                G  I+  +  + +             + 
Sbjct: 4   GIAFDLYGTLFDVHSVVGRCDEAFPGR-----GREISALWRQKQLEYTWLRSLMNRYVNF 58

Query: 74  IDIAKILFPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNA 133
               +              + +       A  +L P S +    + ++ RGLK A ++N 
Sbjct: 59  QQATEDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNG 118

Query: 134 PRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSG 193
             ++ + ++S  GL D F  ++  D  +  KP    Y  A + L + +        +   
Sbjct: 119 SPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWD 178

Query: 194 IKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD 230
                  G P   +         +   P + +     
Sbjct: 179 ATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRA 215

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.9 bits (169), Expect = 6e-15
 Identities = 37/244 (15%), Positives = 89/244 (36%), Gaps = 22/244 (9%)

Query: 18  KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHN---- 73
            L+ + AV FD+D TL D+         E+++ +          +   + +  K +    
Sbjct: 2   GLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECF 61

Query: 74  -------IDIAKILFPDDLPRGL------KFCEDKEAMFRKLASEQLKPISGLDKVKKWI 120
                   D+    + + +          K  E+   +++    + +     +  +   +
Sbjct: 62  HPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTEL 121

Query: 121 EDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS 180
                +   +TN  R+     I       +F  +++G E +  KP P  ++   ++L V 
Sbjct: 122 RKEV-RLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQ 180

Query: 181 KDHTFVFEDSV-SGIKAGVAAGLP-VVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE 238
                +  D++ + I+ G+ AGL   V +       +     P +++    +  L + L+
Sbjct: 181 PGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLE--LPALLQ 238

Query: 239 ELDK 242
            +D 
Sbjct: 239 SIDC 242

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 68.6 bits (166), Expect = 6e-15
 Identities = 38/196 (19%), Positives = 74/196 (37%), Gaps = 13/196 (6%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFP 82
              ++D+ GTL D+      AF E L   G          +    ++    I+       
Sbjct: 4   HDYIWDLGGTLLDNYETSTAAFVETLALYGIT--QDHDSVYQALKVSTPFAIETFAPNLE 61

Query: 83  DDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI 142
           + L +   + E++         E      G+  + + I ++G +   V++   +  E ++
Sbjct: 62  NFLEK---YKENEAREL-----EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-IL 112

Query: 143 SKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGL 202
            K  ++ +F  V+      + KP P+      E  ++S     V  D    I+AG AAGL
Sbjct: 113 EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISS--GLVIGDRPIDIEAGQAAGL 170

Query: 203 PVVGLTTRNPEHVLLE 218
                T+      +L+
Sbjct: 171 DTHLFTSIVNLRQVLD 186

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

 Score = 68.0 bits (164), Expect = 2e-14
 Identities = 38/210 (18%), Positives = 65/210 (30%), Gaps = 9/210 (4%)

Query: 21  PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKIL 80
             +A++FD+DGTL +S P +    RE+L   G     P +     +         + ++ 
Sbjct: 2   TYQALMFDIDGTLTNSQPAYTTVMREVLATYGK----PFSPAQAQKTFPMAAEQAMTELG 57

Query: 81  FPDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAEL 140
                    +   +          E                   L+   VT+  R   E 
Sbjct: 58  IAASEFDHFQAQYEDVMASHYDQIELYPG----ITSLFEQLPSELRLGIVTSQRRNELES 113

Query: 141 MISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAA 200
            +          V I  D+  + KP P P   ALE + V+  +     DSVS  +   AA
Sbjct: 114 GMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAA 173

Query: 201 GLPVVGLTTRNPEHVLLEANPTFLIKDYDD 230
            +           +   +       +   D
Sbjct: 174 NVDFGLAVWGMDPNADHQK-VAHRFQKPLD 202

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 68.0 bits (164), Expect = 2e-14
 Identities = 29/232 (12%), Positives = 73/232 (31%), Gaps = 15/232 (6%)

Query: 22  LEAVLFDVDGTLCDSDPLHHYAFREMLQEIG---------FNDGVPITEDFFVENIAGKH 72
           + AV FD  GTL   +       + M + +G          ++   +T + F       +
Sbjct: 2   IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY 61

Query: 73  --NIDIAKILFPDDLPR-GLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAA 129
               DI + +      + G K+ E+   +  ++     +    + +V K ++ +      
Sbjct: 62  RPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGKYHVGMI 121

Query: 130 VTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFED 189
             +        + +      F  +    +                +     ++  +V ++
Sbjct: 122 TDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDN 181

Query: 190 SVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELD 241
            V         G+  + L  R  E         F++ D  +  +   ++EL+
Sbjct: 182 PVKDCGGSKNLGMTSILL-DRKGEKREFWDKCDFIVSDLRE--VIKIVDELN 230

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 66.8 bits (161), Expect = 4e-14
 Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 13/207 (6%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD 83
           A ++D+DGTL DS         E   +       P  ++   E I      D+   +  D
Sbjct: 3   AFIWDLDGTLLDSYEAILSGIEETFAQFSI----PYDKEKVREFIFKYSVQDLLVRVAED 58

Query: 84  DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMIS 143
                    + +     +  ++    +    +      D    +  +      NA  ++ 
Sbjct: 59  RNLDVEVLNQVRAQSLAEKNAQV--VLMPGAREVLAWADESGIQQFIYTHKGNNAFTILK 116

Query: 144 KLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLP 203
            LG+  +F  ++        KP P+     L+  +++ D+T+   D    ++    +G+ 
Sbjct: 117 DLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQ 176

Query: 204 VVGLTTRNPEHVLLEANPTFLIKDYDD 230
            +       E           I+   D
Sbjct: 177 SINFLESTYE-------GNHRIQALAD 196

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 66.4 bits (161), Expect = 2e-13
 Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 33/168 (19%)

Query: 107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVIL---------- 156
           L+P+  +  +   ++  G +    T  P     +    LGL  +F+   +          
Sbjct: 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAE 273

Query: 157 ---GDECERAKPFPDPYFKAL--------------EMLKVSKDHTFVFEDSVSGIKAGVA 199
                     KP P  Y  AL              +   V+KD  F+  DS++ + +   
Sbjct: 274 NMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQK 333

Query: 200 AGLPVVGLTT----RNPEHVLLEANPTFLIKDYDDPKLWSALEELDKN 243
            G   +G  T    ++    L   +  ++I    +  L   L+ L ++
Sbjct: 334 IGATFIGTLTGLKGKDAAGELEAHHADYVINHLGE--LRGVLDNLLEH 379

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

 Score = 58.1 bits (139), Expect = 6e-11
 Identities = 22/234 (9%), Positives = 69/234 (29%), Gaps = 32/234 (13%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDD 84
           ++ D DGT+  +D         +++     + + + +    + ++ K  +     L P  
Sbjct: 7   IICDFDGTITMND-----NIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSS 61

Query: 85  LPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISK 144
           L   +     ++A  R+   E +           +I +  +    ++         ++  
Sbjct: 62  LKEEITSFVLEDAKIREGFREFV----------AFINEHEIPFYVISGGMDFFVYPLLEG 111

Query: 145 LGLSDFFQVVIL-------------GDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV 191
           +   D                      +   +          +  L     +  +  DSV
Sbjct: 112 IVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSV 171

Query: 192 SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNKD 245
           + ++A   + L               +       +D+ +  +   +E + + ++
Sbjct: 172 TDVEAAKLSDLCFA--RDYLLNECREQNLNHLPYQDFYE--IRKEIENVKEVQE 221

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 47.5 bits (111), Expect = 3e-07
 Identities = 32/216 (14%), Positives = 72/216 (33%), Gaps = 12/216 (5%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGV-PITEDFFVENIAGKHNIDIAKILFP 82
            +LFD D TL +++ +      E+ +E G  + V  IT++     +  + ++     L  
Sbjct: 6   LILFDFDSTLVNNETID-----EIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLK 60

Query: 83  DDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI 142
           D     ++    +       A E +K +     V   +                      
Sbjct: 61  DLPIEKVEKAIKRITPTEG-AEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA 119

Query: 143 SKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGL 202
           ++L + D      +  E  +     +   K  ++  ++ + T    D  + I     AGL
Sbjct: 120 NRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGL 179

Query: 203 PVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE 238
            +        + +L E      I+  D  ++   ++
Sbjct: 180 KIA----FCAKPILKEK-ADICIEKRDLREILKYIK 210

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.7 bits (110), Expect = 3e-07
 Identities = 21/200 (10%), Positives = 45/200 (22%), Gaps = 49/200 (24%)

Query: 24  AVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD 83
             +FD+D TL                                                  
Sbjct: 7   LAVFDLDYTLWPFWV--------------------------------------------- 21

Query: 84  DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMIS 143
           D      F +  +   R    + ++    + +V   ++  G+  AA +          + 
Sbjct: 22  DTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLL 81

Query: 144 KLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLP 203
           +L     + +                + +      V       F+D    I      G+ 
Sbjct: 82  ELFDLGKYFIQR----EIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVT 137

Query: 204 VVGLTTRNPEHVLLEANPTF 223
            + +        L +   TF
Sbjct: 138 CIHIRDGMSLQTLTQGLETF 157

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (102), Expect = 6e-06
 Identities = 34/221 (15%), Positives = 72/221 (32%), Gaps = 30/221 (13%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGV-PITEDFFVENIAGKHNIDIAKILF 81
           +AV FDVD T+   + +      E+ +  G  D V  +T       +  K  +     L 
Sbjct: 11  DAVCFDVDSTVIREEGID-----ELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALI 65

Query: 82  PDDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELM 141
                +  +   ++         E +            +++R ++   ++   R   E +
Sbjct: 66  QPSREQVQRLIAEQPPHLTPGIRELV----------SRLQERNVQVFLISGGFRSIVEHV 115

Query: 142 ISKLG----------LSDFFQVVILGDECERAKPFPDPYFKALEML--KVSKDHTFVFED 189
            SKL           L  +F     G +  +         K +++L  K       +  D
Sbjct: 116 ASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGD 175

Query: 190 SVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD 230
             + ++A   A   +      N     ++ N  + I D+ +
Sbjct: 176 GATDMEACPPADAFIG--FGGNVIRQQVKDNAKWYITDFVE 214

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

 Score = 42.8 bits (99), Expect = 1e-05
 Identities = 35/243 (14%), Positives = 68/243 (27%), Gaps = 35/243 (14%)

Query: 23  EAVLFDVDGTLCDSDPLHHYA--FREMLQEIGF------NDGVPITEDF----------F 64
           + V+ D+DG L   +     A  F   + + G       N      +D            
Sbjct: 4   KNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63

Query: 65  VENIAGKHNIDIAKILFPDDLPRGLKFCED------KEAMFRKLASEQLKPISGLDKVKK 118
            +++     +  A  L   +  +     E        +A F          I G  +   
Sbjct: 64  PDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYN 123

Query: 119 WIEDRGLKRAA-------VTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYF 171
           W                  TN          +   L    + +         KP P    
Sbjct: 124 WDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIR 183

Query: 172 KALEMLKVSKDHTFVFEDSVSG-IKAGVAAGLPVVGLTT---RNPEHVLLEANPTFLIKD 227
            AL  ++   + T +  D++   I AG  AGL  + + +      +   +   P+++   
Sbjct: 184 AALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243

Query: 228 YDD 230
             +
Sbjct: 244 VAE 246

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} Length = 149

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

 Score = 38.6 bits (89), Expect = 2e-04
 Identities = 23/189 (12%), Positives = 55/189 (29%), Gaps = 48/189 (25%)

Query: 23  EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFP 82
           +AV+FDVDGTL   +    Y   E       N  V                ++++K+   
Sbjct: 8   KAVIFDVDGTLAKMNGRGPYDL-EKCDTDVINPMV----------------VELSKMYA- 49

Query: 83  DDLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMI 142
             +   +     +E+  ++  ++  +        +KW+ED                    
Sbjct: 50  -LMGYQIVVVSGRESGTKEDPTKYYR------MTRKWVEDIA------------------ 84

Query: 143 SKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGL 202
                     +    ++ +  K          + +    D     +D    ++     G+
Sbjct: 85  -----GVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGV 139

Query: 203 PVVGLTTRN 211
               + + +
Sbjct: 140 ECWQVASGD 148

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.8 bits (84), Expect = 0.001
 Identities = 28/226 (12%), Positives = 64/226 (28%), Gaps = 32/226 (14%)

Query: 25  VLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD- 83
              D++G L            E+        G+   +         +   D   ++    
Sbjct: 5   ACLDLEGVLVP----------EIWIAFAEKTGIDALK------ATTRDIPDYDVLMKQRL 48

Query: 84  DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMIS 143
            +                     LKP+ G  +   W+     +   +++   E ++ ++ 
Sbjct: 49  RILDEHGLKLGDIQEVIA----TLKPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMR 103

Query: 144 KLG----LSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVA 199
           +LG    L    ++              DP  +++   K          DS +       
Sbjct: 104 QLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSE 163

Query: 200 AGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDKNKD 245
           A   ++      PE+V+ E      +  Y+D  L     +   ++ 
Sbjct: 164 AHAGIL---FHAPENVIREFPQFPAVHTYED--LKREFLKA-SSRS 203

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} Length = 261

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 35/256 (13%), Positives = 73/256 (28%), Gaps = 42/256 (16%)

Query: 23  EAVLFDVDGTLCDSDPLHHYA--FREMLQEIGF------NDGVPITEDFFVENIAGKHNI 74
           E  + D+DGT    D L   +  F E L+E         N+     +D+  +      ++
Sbjct: 8   ELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 67

Query: 75  DIAKILFPDDLPR--------GLKFC---------EDKEAMFRKLASEQLKPISGLDKVK 117
               ++   ++            +             +              + G DK  
Sbjct: 68  PDDAVVTSGEITAEHMLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVLGFDKTL 127

Query: 118 KWIEDRGLKRAAVTNA-----------PRENAELMISKLGLSDFFQVVILGDECERAKPF 166
            +   +                     P +   +  +   ++          +    KP 
Sbjct: 128 TYERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPN 187

Query: 167 PDPYFKALEMLKVSKDHTFVFEDSVSG-IKAGVAAGLPVVGLTT---RNPEHVLLEANPT 222
           P       E   V K+   +  D +   +K G  AG+  + + T      +    E  P 
Sbjct: 188 PLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPD 247

Query: 223 FLIKDYDDPKLWSALE 238
           F+ K+  +  L  A++
Sbjct: 248 FVFKNLGE--LAKAVQ 261

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

 Score = 36.1 bits (82), Expect = 0.002
 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 9/90 (10%)

Query: 159 ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLE 218
           +    KP P    +A + L +    + +  D ++ ++AG  AGL    L           
Sbjct: 124 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEA-----A 178

Query: 219 ANPTFLIKDYDD----PKLWSALEELDKNK 244
             P F I+   D      L +A+E L ++ 
Sbjct: 179 VQPGFAIRPLRDSSELGDLLAAIETLGRDN 208

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

 Score = 34.9 bits (79), Expect = 0.003
 Identities = 10/54 (18%), Positives = 21/54 (38%)

Query: 158 DECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRN 211
           DEC+  KP      + L    + + +++V  D  + I+     G+  +      
Sbjct: 98  DECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 151

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	246
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	100.0
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	100.0
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	100.0
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	100.0
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	100.0
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	100.0
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	100.0
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	100.0
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	100.0
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	100.0
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	100.0
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.97
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.97
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.96
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.96
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.93
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.93
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.93
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.92
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.91
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.91
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.89
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.88
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.87
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.87
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.85
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.82
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.81
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.79
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.79
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.78
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.71
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.71
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.69
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	99.64
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.59
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	99.59
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	99.56
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	99.56
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	99.44
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	99.41
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	99.4
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	99.3
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	99.3
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	99.28
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	99.26
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	99.16
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	99.15
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	99.13
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	98.96
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	98.9
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	98.88
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	98.71
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	98.67
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	98.66
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	98.38
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	98.14
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	97.83
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	97.64
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	94.85
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	93.21
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	93.16
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	92.84
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	92.06
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	89.77
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	89.23
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	85.31
d2nn4a1	62	Hypothetical protein YqgQ {Bacillus subtilis [TaxI	85.08
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	84.94
d1xm3a_	251	Thiazole biosynthesis protein ThiG {Bacillus subti	84.81
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	83.65
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	83.56

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5e-38  Score=234.75  Aligned_cols=214  Identities=20%  Similarity=0.261  Sum_probs=173.3

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC---CchhhhhhHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD---DLPRGLKFCEDKE   96 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   96 (246)
                      ++||+++||+||||+|+...+..++.++++++|+    +.+.......+.+.............   .......+.....
T Consensus         1 ~~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (218)
T d1te2a_           1 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGV----DISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVI   76 (218)
T ss_dssp             CCCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTC----CGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHH
T ss_pred             CcceEEEECCCCcccCCHHHHHHHHHHHHHHcCC----CCCHHHHHHHHhCCCccchhhhhhhcccccchhHHHHHHHHH
Confidence            4689999999999999999899999999999954    45544333334455554444433322   2222334444444


Q ss_pred             HHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHH
Q 025896           97 AMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      ..+.........++||+.++|+.|++.|++++|+||++...++..++++|+.++|+.++++++.+..||+|+.|+.++++
T Consensus        77 ~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~  156 (218)
T d1te2a_          77 ARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAK  156 (218)
T ss_dssp             HHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHH
T ss_pred             HHHHHhhhccccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence            55555555567889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          177 LKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       177 ~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      +|++|+++++|||+.+|+.+|+++|+.+|++..+....+.....|+++++++.|+....++
T Consensus       157 l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~~~~l~  217 (218)
T d1te2a_         157 LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDLL  217 (218)
T ss_dssp             HTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHHHHH
T ss_pred             cCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCCHhhcC
Confidence            9999999999999999999999999999999887655555567899999999997655443

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=100.00  E-value=5.1e-36  Score=224.48  Aligned_cols=213  Identities=19%  Similarity=0.316  Sum_probs=170.1

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhC--------CC-Cchhhh
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF--------PD-DLPRGL   89 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~   89 (246)
                      |.++|+|+||+||||+|+...+..++.++++++|..   ...... ...+.+...........        .. ......
T Consensus         1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (224)
T d2hsza1           1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLP---QASENL-VMTWIGNGADVLSQRAVDWACKQAEKELTEDEFK   76 (224)
T ss_dssp             CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCC---CCCHHH-HHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred             CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCC---CCcHHH-HHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHH
Confidence            467999999999999999999999999999999653   233333 33444544433322221        11 222233


Q ss_pred             hhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHH
Q 025896           90 KFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDP  169 (246)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~  169 (246)
                      ...................++||+.++|.+|++.|++++++||.....++..++++|+.++|+.++++++.+..||+|+.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~  156 (224)
T d2hsza1          77 YFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAP  156 (224)
T ss_dssp             HHHHHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHH
T ss_pred             HHHHHHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccccccchh
Confidence            33333333444444556789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC-hhhhhccCCcEEecCCCChhhHHHH
Q 025896          170 YFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP-EHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      +..++++++++++++++|||+.+|+.+|+++|+.++++.+++. ..+.....|+++++++.|  ++.++
T Consensus       157 ~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~d--L~~ii  223 (224)
T d2hsza1         157 FYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFAD--ILKIT  223 (224)
T ss_dssp             HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGG--GGGGT
T ss_pred             hHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHH--HHHhh
Confidence            9999999999999999999999999999999999999998854 445566789999999999  55544

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=100.00  E-value=3.4e-35  Score=224.60  Aligned_cols=214  Identities=25%  Similarity=0.371  Sum_probs=170.0

Q ss_pred             CcceEEEeCCCccccChhh-HHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHH-------------HHHhCCC--C
Q 025896           21 PLEAVLFDVDGTLCDSDPL-HHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDI-------------AKILFPD--D   84 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~--~   84 (246)
                      +||+|+||+||||+|+... ...++.++++++|    ...+.+.+... .|......             +...+..  .
T Consensus         1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (257)
T d1swva_           1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRG----VAITAEEARKP-MGLLKIDHVRALTEMPRIASEWNRVFRQLPT   75 (257)
T ss_dssp             CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTT----CCCCHHHHHTT-TTSCHHHHHHHHHHSHHHHHHHHHHHSSCCC
T ss_pred             CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcC----CCCCHHHHHHH-hCCcHHHHHHHHhhhhhhhHHHHHHhcccCC
Confidence            5899999999999998754 4778889999994    44565554332 23322222             2222222  3


Q ss_pred             chhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc-eEEEecCCCCCC
Q 025896           85 LPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF-QVVILGDECERA  163 (246)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~~  163 (246)
                      ..........+...+.........++||+.++|++|+++|++++|+||.+...++..++++|+..+| |.++++++.+..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~  155 (257)
T d1swva_          76 EADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAG  155 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCC
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccccccccccccc
Confidence            4445556666667777766667789999999999999999999999999999999999999999877 888888988999


Q ss_pred             CCChHHHHHHHHHcCCCC-CcEEEEecChhhhHHHHhcCCCEEEEcCCCCh------------------------hhhhc
Q 025896          164 KPFPDPYFKALEMLKVSK-DHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE------------------------HVLLE  218 (246)
Q Consensus       164 kp~~~~~~~~~~~~~~~~-~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~------------------------~~~~~  218 (246)
                      ||+|+.|..+++++|+.| ++|+||||+.+|+.+|+++|+.+|+|.+|...                        ..+..
T Consensus       156 KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  235 (257)
T d1swva_         156 RPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVE  235 (257)
T ss_dssp             TTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             ccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHh
Confidence            999999999999999965 89999999999999999999999999998531                        12334


Q ss_pred             cCCcEEecCCCChhhHHHHhhhh
Q 025896          219 ANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       219 ~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                      .+|+|+|+++.|  +..+++.+.
T Consensus       236 ~gad~vi~~l~e--L~~ii~~~~  256 (257)
T d1swva_         236 NGAHFTIETMQE--LESVMEHIE  256 (257)
T ss_dssp             TTCSEEESSGGG--HHHHHHHHT
T ss_pred             CCCCEEECCHHH--HHHHHHHHh
Confidence            569999999999  777777664

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=100.00  E-value=5.2e-35  Score=216.58  Aligned_cols=202  Identities=21%  Similarity=0.212  Sum_probs=165.5

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMF   99 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (246)
                      |++|+|+||+||||+|+...+.+++..+++++|    .+.........+ +............ .......+...+...+
T Consensus         1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g----~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   74 (207)
T d2hdoa1           1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYG----KPFSPAQAQKTF-PMAAEQAMTELGI-AASEFDHFQAQYEDVM   74 (207)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTT----CCCCHHHHHHHT-TSCHHHHHHHTTC-CGGGHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcC----CCCCHHHHHHHh-cchhhhhhhcccc-chhhHHHHHHHhhhhh
Confidence            468999999999999999999999999999994    456666665554 4444544444432 2333344444444444


Q ss_pred             HHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          100 RKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       100 ~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      .... ...+++||+.++|++|++ +++++|+||+....++..++++|+..+|+.++++++.+..||+|.+++.+++++|+
T Consensus        75 ~~~~-~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~  152 (207)
T d2hdoa1          75 ASHY-DQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNV  152 (207)
T ss_dssp             TTCG-GGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTC
T ss_pred             cccc-cccccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccccchhhhhhhcccccceee
Confidence            4433 357899999999999986 59999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCC
Q 025896          180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD  230 (246)
Q Consensus       180 ~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~e  230 (246)
                      +|++|++|||+.+|+.+|+++|+.++++.+|....... ..++++++++.|
T Consensus       153 ~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~-~~~~~~i~~l~d  202 (207)
T d2hdoa1         153 APQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADH-QKVAHRFQKPLD  202 (207)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGG-SCCSEEESSGGG
T ss_pred             eccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHh-hhcCcEeCCHHH
Confidence            99999999999999999999999999999885544433 467899999988

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=100.00  E-value=3.5e-34  Score=212.47  Aligned_cols=208  Identities=15%  Similarity=0.196  Sum_probs=169.7

Q ss_pred             cCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHH
Q 025896           19 LAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAM   98 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (246)
                      |.+||+|+||+||||+|+...+..++.++++++|++    .........+.+......+......  .........+...
T Consensus         1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   74 (210)
T d2ah5a1           1 MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVP----SPDAKTIRGFMGPPLESSFATCLSK--DQISEAVQIYRSY   74 (210)
T ss_dssp             CTTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCC----CCCHHHHHHTSSSCHHHHHHTTSCG--GGHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCC----CCCHHHHHHhhhcchhhhccccccc--hhhHHHHHHHHHH
Confidence            457999999999999999999999999999999653    3333333455677766666665543  3344444444555


Q ss_pred             HHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcC
Q 025896           99 FRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLK  178 (246)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~  178 (246)
                      +.........+++++.++|+.++.+ ++++++||++...++..++++|+..+|+.++.+++.  ++|+|+.+..+++++|
T Consensus        75 ~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~--~~~~p~~~~~~~~~~~  151 (210)
T d2ah5a1          75 YKAKGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQ  151 (210)
T ss_dssp             HHHTGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSS--CCSHHHHHHHHHHHTT
T ss_pred             HHhhhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhccccccccccccccc--ccccccccchhhhhhh
Confidence            5555555678899999999999887 589999999999999999999999999999988764  6788899999999999


Q ss_pred             CCCCcEEEEecChhhhHHHHhcCCCEEEEcCC-CChhhhhccCCcEEecCCCChhhHHHH
Q 025896          179 VSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR-NPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       179 ~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      ++|+++++|||+.+|+.+|+++|++++++.+| +...++...+|+++++++.|  ++.+|
T Consensus       152 ~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~e--l~~~l  209 (210)
T d2ah5a1         152 LAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLE--VLAYF  209 (210)
T ss_dssp             CCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTH--HHHHT
T ss_pred             cccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHH--HHHHh
Confidence            99999999999999999999999999999988 45566666789999999999  55544

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=100.00  E-value=7.1e-34  Score=209.93  Aligned_cols=200  Identities=18%  Similarity=0.256  Sum_probs=158.7

Q ss_pred             ceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHHHHH
Q 025896           23 EAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMFRKL  102 (246)
Q Consensus        23 k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (246)
                      ++++||+||||+|+...+..++.++++++|+    +.........+.+......+..+........ +........+...
T Consensus         2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   76 (204)
T d2go7a1           2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSI----PYDKEKVREFIFKYSVQDLLVRVAEDRNLDV-EVLNQVRAQSLAE   76 (204)
T ss_dssp             CEEEECTBTTTEECHHHHHHHHHHHHHHHTC----CCCHHHHHHHHHHSCHHHHHHHHHHHHTCCH-HHHHHHHHHHHTT
T ss_pred             EEEEEcCCCcCccCHHHHHHHHHHHHHHcCC----CCCHHHHHHhhcccccccccccccchhhhhH-HHHHHHHHHHHHh
Confidence            5899999999999999999999999999954    4555555555556666666655543311111 1222222333333


Q ss_pred             hhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 025896          103 ASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKD  182 (246)
Q Consensus       103 ~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~  182 (246)
                      ......++||+.++|+.|+++|++++|+||... .....++++|+.++|+.++++++.+..||+|++|+.++++++++|+
T Consensus        77 ~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~  155 (204)
T d2go7a1          77 KNAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSD  155 (204)
T ss_dssp             CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGG
T ss_pred             hcccCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCc
Confidence            344678899999999999999999999999875 4567899999999999999999999999999999999999999999


Q ss_pred             cEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          183 HTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       183 ~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      +|+||||+.+|+.+|+++|+++|++.++.       ..+++.++++.|  +..++
T Consensus       156 ~~l~VgD~~~Di~~A~~~G~~~i~v~~~~-------~~~~~~~~~~~d--l~~l~  201 (204)
T d2go7a1         156 NTYYIGDRTLDVEFAQNSGIQSINFLEST-------YEGNHRIQALAD--ISRIF  201 (204)
T ss_dssp             GEEEEESSHHHHHHHHHHTCEEEESSCCS-------CTTEEECSSTTH--HHHHT
T ss_pred             eEEEEeCCHHHHHHHHHcCCeEEEEcCCC-------CCcCeecCCHHH--HHHHh
Confidence            99999999999999999999999997663       346788889888  44443

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.2e-33  Score=211.39  Aligned_cols=211  Identities=26%  Similarity=0.430  Sum_probs=172.0

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-CchhhhhhHHHHHHHHH
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-DLPRGLKFCEDKEAMFR  100 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  100 (246)
                      +|+|+||+||||+|+...+..++.++++++|    .+.+.+.+...+.|.+.......+... ...............+.
T Consensus         2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (222)
T d2fdra1           2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAG----YPISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKLLD   77 (222)
T ss_dssp             CSEEEECSBTTTBCCHHHHHHHHHHHHHHTT----CCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHHHHHHH
T ss_pred             ceEEEECCCCcccCCHHHHHHHHHHHHHHcC----CCCCHHHHHHHHhhhccccccccccccccccccccchhHHHHHHH
Confidence            6899999999999999999999999999994    457777777778888887777766544 22223334444555555


Q ss_pred             HHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCC---CCCCCCChHHHHHHHHHc
Q 025896          101 KLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDE---CERAKPFPDPYFKALEML  177 (246)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~---~~~~kp~~~~~~~~~~~~  177 (246)
                      ........++||+.++|++|+.   +.+++|+.....++..++++++.++|+.++.+.+   ....||+|+.|..+++++
T Consensus        78 ~~~~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l  154 (222)
T d2fdra1          78 MRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQF  154 (222)
T ss_dssp             HHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHH
T ss_pred             HHhhhccchhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHhh
Confidence            5555568899999999998864   5679999999999999999999999987655432   467899999999999999


Q ss_pred             CCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC-----hhhhhccCCcEEecCCCChhhHHHHhhhh
Q 025896          178 KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP-----EHVLLEANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       178 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~-----~~~~~~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                      |++|++|++|||+..|+.+|+++|+.++++.++..     ...+...+|+++|+++.|  +..+|.++.
T Consensus       155 ~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~e--L~~ll~~l~  221 (222)
T d2fdra1         155 GVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQD--LPAVIAAMA  221 (222)
T ss_dssp             TCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGG--HHHHHHHHT
T ss_pred             CCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHH--HHHHHHHhc
Confidence            99999999999999999999999999999998842     233455679999999999  788887764

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.7e-32  Score=208.24  Aligned_cols=222  Identities=16%  Similarity=0.288  Sum_probs=160.1

Q ss_pred             ccCCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHH----HhcC-------CCHHHHH----HHhCC
Q 025896           18 KLAPLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVE----NIAG-------KHNIDIA----KILFP   82 (246)
Q Consensus        18 ~~~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~----~~~~~   82 (246)
                      .|.+||+|+||+||||+++......++.++++.++...........+..    ....       .......    ...+.
T Consensus         2 ~m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (247)
T d2gfha1           2 GLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQ   81 (247)
T ss_dssp             ECCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEcCCCCcCcChHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHH
Confidence            4788999999999999998888888888887776432111111111100    0000       0001111    10000


Q ss_pred             C--CchhhhhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC
Q 025896           83 D--DLPRGLKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC  160 (246)
Q Consensus        83 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~  160 (246)
                      .  .......+.......+.........++||+.++|+.|++ |++++++||++...++..++++|+.++||.++++++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~  160 (247)
T d2gfha1          82 ETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQ  160 (247)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGS
T ss_pred             HhccccchHHHHHHHHHHHHHhhhccCccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccccccccccccc
Confidence            0  111111222233333344344567899999999999985 7999999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEE-EEcCCCChhhhhccCCcEEecCCCChhhHHHHh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVV-GLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i-~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~  238 (246)
                      +..||+|.+|+.+++++|++|++|+||||+. +|+.+|+++|+.++ ++.+.+.........|+++|+++.|  +..+|+
T Consensus       161 ~~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~e--L~~ll~  238 (247)
T d2gfha1         161 KEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLE--LPALLQ  238 (247)
T ss_dssp             SSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGG--HHHHHH
T ss_pred             ccchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHH--HHHHHH
Confidence            9999999999999999999999999999997 89999999999854 5555544444455689999999999  888888


Q ss_pred             hhhc
Q 025896          239 ELDK  242 (246)
Q Consensus       239 ~~~~  242 (246)
                      ++..
T Consensus       239 ~i~~  242 (247)
T d2gfha1         239 SIDC  242 (247)
T ss_dssp             HHTT
T ss_pred             HHhh
Confidence            8764

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=6e-33  Score=208.63  Aligned_cols=212  Identities=16%  Similarity=0.203  Sum_probs=154.5

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC---Cchhh-----hhh-
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD---DLPRG-----LKF-   91 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~-   91 (246)
                      ++|+|+||+||||+++..........+.+.++..   ..........+... ...........   .....     ... 
T Consensus         1 MiK~I~FD~dGTL~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (230)
T d1x42a1           1 MIRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDY---PLNPKTLLDEYEKL-TREAFSNYAGKPYRPIRDIEEEVMRKLA   76 (230)
T ss_dssp             CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHTTC---SSCHHHHHHHHHHH-HHHHHHHHTTSBCCCHHHHHHHHHHHHH
T ss_pred             CCeEEEEeCCCCcEechhhHHHHHHHHHHHHhhc---CCCHHHHHHHHHHH-HHHHHHHhcccccchHHHHHHHHHHHHH
Confidence            5899999999999998877666666666666321   23333222211100 01111111111   00000     000 


Q ss_pred             -------HHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCC
Q 025896           92 -------CEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAK  164 (246)
Q Consensus        92 -------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~k  164 (246)
                             .......+.........++||+.++|+.|++ |++++++||++...++..++.+|+.++|+.++++++.+..|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~K  155 (230)
T d1x42a1          77 EKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFK  155 (230)
T ss_dssp             HHHCCCCCTTHHHHHHHHHHHHCCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCT
T ss_pred             HHhhhchHHHHHHHHHHHHHhhCcccccHHHHHHHhhc-cCceeeeeccccccchhhhcccccccccccccccccccccc
Confidence                   0111223333333457889999999999975 69999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          165 PFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       165 p~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      |+|++|+.+++++|++|++|++|||+. +|+.+|+++|++++++.++....+. ...|+++++|+.|  +..+++++
T Consensus       156 P~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~-~~~~d~~i~~l~e--l~~~l~~l  229 (230)
T d1x42a1         156 PHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREF-WDKCDFIVSDLRE--VIKIVDEL  229 (230)
T ss_dssp             TSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGG-GGGSSEEESSTTH--HHHHHHHH
T ss_pred             hhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCccc-ccCCCEEECCHHH--HHHHHHHc
Confidence            999999999999999999999999996 8999999999999999887655443 3578999999999  78888765

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=4.6e-33  Score=209.03  Aligned_cols=212  Identities=17%  Similarity=0.257  Sum_probs=158.7

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHh-cCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC---Cch----hhhhhHH
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEI-GFNDGVPITEDFFVENIAGKHNIDIAKILFPD---DLP----RGLKFCE   93 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~   93 (246)
                      -|+|+||+||||+++...+..++.+++.+. +..    .....  ..+.+..........+..   ...    .......
T Consensus         2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (228)
T d2hcfa1           2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTE----GSTGS--HDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKE   75 (228)
T ss_dssp             CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCC----CCC-----CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred             ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCC----ccHHH--HHHhcCchHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence            478999999999999999999998877775 322    11111  112233333322222221   111    2222333


Q ss_pred             HHHHHHHHHh-hccCCCcccHHHHHHHHHHcC-CeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHH
Q 025896           94 DKEAMFRKLA-SEQLKPISGLDKVKKWIEDRG-LKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYF  171 (246)
Q Consensus        94 ~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g-~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~  171 (246)
                      .+...+.... .....++||+.++|+.|+++| ++++|+||++...+...++.+|+.++||.++++++....||+|..+.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~  155 (228)
T d2hcfa1          76 TYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIAL  155 (228)
T ss_dssp             HHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHH
T ss_pred             HHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccchhHHHH
Confidence            3333333322 234678999999999999987 89999999999999999999999999999999999888999988877


Q ss_pred             HHHHHc---CCCCCcEEEEecChhhhHHHHhcCCCEEEEcCC-CChhhhhccCCcEEecCCCChhhHHHHhhhh
Q 025896          172 KALEML---KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR-NPEHVLLEANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       172 ~~~~~~---~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                      ..++.+   +++|++|+||||+.+|+.+|+.+|+.+|+|.+| +..+++....|+++++++.|  +..+|.++-
T Consensus       156 ~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~e--l~~~l~~l~  227 (228)
T d2hcfa1         156 ERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAE--TDEVLASIL  227 (228)
T ss_dssp             HHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCC--HHHHHHHHH
T ss_pred             HHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHH--HHHHHHHHh
Confidence            666655   789999999999999999999999999999988 45666677789999999999  777776653

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=100.00  E-value=6.1e-32  Score=201.85  Aligned_cols=200  Identities=21%  Similarity=0.346  Sum_probs=161.5

Q ss_pred             CcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCC-----CchhhhhhHHHH
Q 025896           21 PLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPD-----DLPRGLKFCEDK   95 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~   95 (246)
                      ++|+|+||+||||+|+...+.+++..+++.+|+    ......+...+.+.........+...     .......+....
T Consensus         1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (221)
T d1o08a_           1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGI----NGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRK   76 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTC----CCCCHHHHTTTTTCCHHHHHHHHHTTSSSCCCHHHHHHHHHHH
T ss_pred             CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCC----CCChHHHHHHHhhccchhhhhhccccccccchhhhhhhHHHHH
Confidence            589999999999999998899999999999954    44555566666677777777766654     333444555555


Q ss_pred             HHHHHHHhhc--cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHH
Q 025896           96 EAMFRKLASE--QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKA  173 (246)
Q Consensus        96 ~~~~~~~~~~--~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~  173 (246)
                      .+.+......  ...++||+.++|+.|++.|++++++|+..  .....++.+++.++|+.++++++.+.+||+|+.|+.+
T Consensus        77 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~--~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~  154 (221)
T d1o08a_          77 NDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK--NGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAA  154 (221)
T ss_dssp             HHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHH
T ss_pred             HhhccccccccccccccCCceeccccccccccceEEEeecc--hhhHHHHhhccccccccccccccccccccChHHHHHH
Confidence            5555554432  45789999999999999999999999974  4678899999999999999999999999999999999


Q ss_pred             HHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          174 LEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       174 ~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                      ++++|++|++|+||||+.+|+.+|+++|+++|+|.++..     ...+..+++++.++
T Consensus       155 l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~-----~~~~~~~~~~~~~~  207 (221)
T d1o08a_         155 AHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPED-----LGDDIVIVPDTSHY  207 (221)
T ss_dssp             HHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHH-----HCSSSEEESSGGGC
T ss_pred             HHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChhh-----cccccEEcCCcccC
Confidence            999999999999999999999999999999999965421     12345566666653

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.97  E-value=7.3e-31  Score=190.98  Aligned_cols=181  Identities=20%  Similarity=0.223  Sum_probs=144.4

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhCCCCchhhhhhHHHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILFPDDLPRGLKFCEDKEAMF   99 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (246)
                      |++|+|+||+||||+|+...+..++.++++.+|+    ..+.......+ +......++.+...    ...+.+.+.+.+
T Consensus         1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~----~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~   71 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGI----TQDHDSVYQAL-KVSTPFAIETFAPN----LENFLEKYKENE   71 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTC----CCCHHHHHHHH-HHCHHHHHHHHCTT----CTTHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCC----CccHHHHHhhh-hccchhhhhhhhHH----HHHHHHHHHHHH
Confidence            5789999999999999999999999999999954    45555544433 34444455555433    222333344444


Q ss_pred             HHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          100 RKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       100 ~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      .... ....++||+.++|++|++.|++++|+||.+.... ..++++++..+|+.++++++....||+|+.|+.+++++++
T Consensus        72 ~~~~-~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~  149 (187)
T d2fi1a1          72 AREL-EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI  149 (187)
T ss_dssp             HHHT-TSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC
T ss_pred             HHHh-hcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccccCCCHHHHHHHHHHcCC
Confidence            4443 3578899999999999999999999999876655 5789999999999999999999999999999999999887


Q ss_pred             CCCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh
Q 025896          180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE  213 (246)
Q Consensus       180 ~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~  213 (246)
                        +++++|||+..|+.+|+++|+++++++++...
T Consensus       150 --~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~  181 (187)
T d2fi1a1         150 --SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNL  181 (187)
T ss_dssp             --SSEEEEESSHHHHHHHHHTTCEEEECSCHHHH
T ss_pred             --CCeEEEeCCHHHHHHHHHcCCEEEEECCCCCh
Confidence              55999999999999999999999999765433

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.97  E-value=5.1e-31  Score=196.58  Aligned_cols=126  Identities=18%  Similarity=0.247  Sum_probs=117.1

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      ....+++++.++++.+++.|++++++||+.....+..+.+.++..+||.++++++.+..||+|+.|+.+++++|++|++|
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~  169 (220)
T d1zrna_          90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI  169 (220)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred             ccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceE
Confidence            35678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCC
Q 025896          185 FVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD  230 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~e  230 (246)
                      +||||+..|+.+|+++|++++++.+++.........|+++|+++.|
T Consensus       170 l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~e  215 (220)
T d1zrna_         170 LFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRA  215 (220)
T ss_dssp             EEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHH
T ss_pred             EEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHH
Confidence            9999999999999999999999988755444455679999999988

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.96  E-value=2.8e-29  Score=190.03  Aligned_cols=131  Identities=22%  Similarity=0.325  Sum_probs=116.4

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      ...++|++.+.|+.|+  ++.++++||++...+...+.++++..+||.++++++.+..||+|++|..+++++|++|++|+
T Consensus        91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l  168 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL  168 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEE
T ss_pred             ccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhEE
Confidence            4688999999999886  57899999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecChhhhHHHHhcCCCEEEEcCCCCh-----------------------hhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          186 VFEDSVSGIKAGVAAGLPVVGLTTRNPE-----------------------HVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~~i~v~~~~~~-----------------------~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ||||+.+|+.+|+++|+++|+|+++...                       .+.....||++++++.|  ++.+++.+
T Consensus       169 ~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~e--l~~lv~~~  244 (245)
T d1qq5a_         169 FVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGD--LPRLVRGM  244 (245)
T ss_dssp             EEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGG--HHHHHHHH
T ss_pred             EEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHH--HHHHHHhh
Confidence            9999999999999999999999876421                       12223469999999999  77777664

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1e-28  Score=187.31  Aligned_cols=128  Identities=15%  Similarity=0.111  Sum_probs=110.9

Q ss_pred             hccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEec-CCCCCCCCChHHHHHHHHHcCCCCC
Q 025896          104 SEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILG-DECERAKPFPDPYFKALEMLKVSKD  182 (246)
Q Consensus       104 ~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~-~~~~~~kp~~~~~~~~~~~~~~~~~  182 (246)
                      .....++||+.++|.+|+++|++++|+||++...++..+..+++.++|+..... +.....||+|.+|..+++++|++|+
T Consensus       123 ~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~  202 (253)
T d1zs9a1         123 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTN  202 (253)
T ss_dssp             SCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGG
T ss_pred             hcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcC
Confidence            345678999999999999999999999999999999999999998888754433 5566799999999999999999999


Q ss_pred             cEEEEecChhhhHHHHhcCCCEEEEcCC-CChhhhhccCCcEEecCCCCh
Q 025896          183 HTFVFEDSVSGIKAGVAAGLPVVGLTTR-NPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       183 ~~~~igD~~~Di~~a~~~G~~~i~v~~~-~~~~~~~~~~~~~~i~~~~el  231 (246)
                      +|+||||+.+|+.+|+++|+++++|.++ +.........++.+|+|+.||
T Consensus       203 ~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL  252 (253)
T d1zs9a1         203 NILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL  252 (253)
T ss_dssp             GEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred             cEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence            9999999999999999999999999876 333334445678899999884

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.8e-25  Score=166.56  Aligned_cols=201  Identities=10%  Similarity=0.085  Sum_probs=125.8

Q ss_pred             CcceEEEeCCCccccChhh---H----HHHHHHHHHHhcCCCCCCCchHHHHHHhcCCCHHHHHHHhC---CC--Cchhh
Q 025896           21 PLEAVLFDVDGTLCDSDPL---H----HYAFREMLQEIGFNDGVPITEDFFVENIAGKHNIDIAKILF---PD--DLPRG   88 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~   88 (246)
                      ++++|+||+||||+|+...   .    .+++.+.+...    +.......................+.   ..  .....
T Consensus         2 ~~~~~lfD~dGTl~d~~~v~d~lfp~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (225)
T d2g80a1           2 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQD----TRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPIL   77 (225)
T ss_dssp             CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSC----CTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHH
T ss_pred             CCCEEEEcCCCCCcccHhhhhhhhHHHHHHHHHHHHHh----cCChHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhHHH
Confidence            5789999999999997531   1    22222333322    22222333333333333322222221   11  12222


Q ss_pred             hhhHHHHHHHHHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHH-----------HHhcCCCCcceEEEec
Q 025896           89 LKFCEDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELM-----------ISKLGLSDFFQVVILG  157 (246)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~-----------l~~~~l~~~f~~~~~~  157 (246)
                      ..+.................+++++.+++.    .+..+++.++.........           +..+++.++|+.++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~  153 (225)
T d2g80a1          78 KQLQGYVWAHGYESGQIKAPVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI  153 (225)
T ss_dssp             HHHHHHHHHHHHHTTSCCBCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH
T ss_pred             HHHHHHHHHHHHHhhcccccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeec
Confidence            222221112222222223456666666664    4466778888766554433           3456888999999887


Q ss_pred             CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          158 DECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       158 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                      +.. ..||+|.+|+.+++++|++|++|+||||+.+|+.+|+++|+.+|++.++++... ....++.+|+++.||
T Consensus       154 ~~~-~~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~-~~~~~~~~i~~~~eL  225 (225)
T d2g80a1         154 NTS-GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPV-PDGQKYQVYKNFETL  225 (225)
T ss_dssp             HHH-CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCC-CSSCCSCEESCSTTC
T ss_pred             ccc-CCCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCC-cccCCCCccCChhhC
Confidence            654 479999999999999999999999999999999999999999999987654322 335677799999884

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.7e-26  Score=168.70  Aligned_cols=106  Identities=19%  Similarity=0.192  Sum_probs=94.5

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHH----HHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCC
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRE----NAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS  180 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~----~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  180 (246)
                      ....++|++.++|..|+++|++++++||....    ..+......++.++||.++++++.+.+||+|++|+.+++++|++
T Consensus        96 ~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~  175 (225)
T d1zd3a1          96 SARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS  175 (225)
T ss_dssp             HHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred             hcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccC
Confidence            35778999999999999999999999987543    33444455677889999999999999999999999999999999


Q ss_pred             CCcEEEEecChhhhHHHHhcCCCEEEEcCC
Q 025896          181 KDHTFVFEDSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       181 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~  210 (246)
                      |++|+||||+..|+.+|+++|++++++.++
T Consensus       176 p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~  205 (225)
T d1zd3a1         176 PSEVVFLDDIGANLKPARDLGMVTILVQDT  205 (225)
T ss_dssp             GGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred             ccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence            999999999999999999999999999765

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.4e-26  Score=172.47  Aligned_cols=108  Identities=19%  Similarity=0.194  Sum_probs=97.7

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCC----HHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCC
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAP----RENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVS  180 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~----~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  180 (246)
                      ....++|++.++|.+|+++|++++++|++.    .......+..+++.++||.++++++.+..||+|+.|+.++++++++
T Consensus        94 ~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~  173 (222)
T d1cr6a1          94 AARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAK  173 (222)
T ss_dssp             HTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSC
T ss_pred             hcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCC
Confidence            357789999999999999999999999853    3455666778899999999999999999999999999999999999


Q ss_pred             CCcEEEEecChhhhHHHHhcCCCEEEEcCCCC
Q 025896          181 KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP  212 (246)
Q Consensus       181 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~  212 (246)
                      |++|+||||+.+|+.+|+.+|+++|+|.++..
T Consensus       174 p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~  205 (222)
T d1cr6a1         174 PNEVVFLDDFGSNLKPARDMGMVTILVHNTAS  205 (222)
T ss_dssp             TTSEEEEESSSTTTHHHHHHTCEEEECCSSSH
T ss_pred             cceEEEEECCHHHHHHHHHcCCEEEEECCcch
Confidence            99999999999999999999999999977653

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=8.4e-26  Score=160.29  Aligned_cols=106  Identities=11%  Similarity=0.150  Sum_probs=93.8

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPR-ENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      ..+.++||+.++|++|+++|++++|+|+++. ...+..++++++..+|+.+..     ..||+|..+..+++++|++|++
T Consensus        43 ~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~kp~~~~~~~~~~~~~~~~~~  117 (164)
T d1u7pa_          43 QNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREI-----YPGSKVTHFERLHHKTGVPFSQ  117 (164)
T ss_dssp             CEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEE-----SSSCHHHHHHHHHHHHCCCGGG
T ss_pred             cccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeec-----ccCCChHHHHHHHHHhCCChHH
Confidence            3578999999999999999999999998766 456777889999988887753     4679999999999999999999


Q ss_pred             EEEEecChhhhHHHHhcCCCEEEEcCCCChhh
Q 025896          184 TFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHV  215 (246)
Q Consensus       184 ~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~  215 (246)
                      ++||||+..|+++|+++|+.+|+|.+|.+..+
T Consensus       118 ~l~igD~~~di~aA~~aG~~~i~v~~G~~~~~  149 (164)
T d1u7pa_         118 MVFFDDENRNIIDVGRLGVTCIHIRDGMSLQT  149 (164)
T ss_dssp             EEEEESCHHHHHHHHTTTCEEEECSSCCCHHH
T ss_pred             EEEEcCCHHHHHHHHHcCCEEEEECCCCChHH
Confidence            99999999999999999999999998865444

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.4e-25  Score=163.49  Aligned_cols=108  Identities=14%  Similarity=0.203  Sum_probs=98.2

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc-CCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL-GLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHT  184 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~-~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  184 (246)
                      ...+++++.+++..++..|+.++++||++.......+... ++..+|+.++++++.+..||+|++|+.+++++|++|++|
T Consensus        82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~  161 (197)
T d2b0ca1          82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT  161 (197)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred             ccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeE
Confidence            4578899999999999999999999999877766666665 788899999999999999999999999999999999999


Q ss_pred             EEEecChhhhHHHHhcCCCEEEEcCCCCh
Q 025896          185 FVFEDSVSGIKAGVAAGLPVVGLTTRNPE  213 (246)
Q Consensus       185 ~~igD~~~Di~~a~~~G~~~i~v~~~~~~  213 (246)
                      +||||+.+|+++|+++|+.++++.++...
T Consensus       162 l~vgDs~~di~~A~~aG~~ti~v~~~~~~  190 (197)
T d2b0ca1         162 VFFDDNADNIEGANQLGITSILVKDKTTI  190 (197)
T ss_dssp             EEEESCHHHHHHHHTTTCEEEECCSTTHH
T ss_pred             EEEeCCHHHHHHHHHcCCEEEEECCCCCC
Confidence            99999999999999999999999776543

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.8e-23  Score=150.54  Aligned_cols=130  Identities=18%  Similarity=0.281  Sum_probs=100.8

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHH---------------HHHHHHHhcCCCCcceEEEec-----------CC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRE---------------NAELMISKLGLSDFFQVVILG-----------DE  159 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~---------------~~~~~l~~~~l~~~f~~~~~~-----------~~  159 (246)
                      .++++||+.++|++|+++|++++++||.+..               .....+...++. ..+..++.           ..
T Consensus        25 ~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~cp~~p~~~~~~~~~~  103 (182)
T d2gmwa1          25 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-LDGIYYCPHHPQGSVEEFRQV  103 (182)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-CSEEEEECCBTTCSSGGGBSC
T ss_pred             HeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccc-ccceeeccccccccccccccc
Confidence            4778999999999999999999999998631               122233333443 12222222           23


Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCE-EEEcCCCChhhhhccCCcEEecCCCChhhHHHHh
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPV-VGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~-i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~  238 (246)
                      ...+||+|.++..+++++++++++++||||+.+|+++|+++|+.+ +++.+++...+..+..|+++++++.|  +..+++
T Consensus       104 ~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~d--l~~~ik  181 (182)
T d2gmwa1         104 CDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLAD--LPQAIK  181 (182)
T ss_dssp             CSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGG--HHHHHH
T ss_pred             ccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHH--HHHHhc
Confidence            456899999999999999999999999999999999999999975 77887766555556679999999999  777665

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=5.8e-23  Score=153.18  Aligned_cols=199  Identities=10%  Similarity=0.042  Sum_probs=126.9

Q ss_pred             cceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCC-CHHHHHHHhCCCCchhhhhhHHHHHHHHH
Q 025896           22 LEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGK-HNIDIAKILFPDDLPRGLKFCEDKEAMFR  100 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (246)
                      -.+|+|||||||++++.     +..+++.++.+    .-.........+. .....+...+....       ......+.
T Consensus         4 k~lVifD~DGTL~~~d~-----~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~   67 (226)
T d2feaa1           4 KPFIICDFDGTITMNDN-----IINIMKTFAPP----EWMALKDGVLSKTLSIKEGVGRMFGLLP-------SSLKEEIT   67 (226)
T ss_dssp             CEEEEECCTTTTBSSCH-----HHHHHHHHSCT----HHHHHHHHHHTTSSCHHHHHHHHHTTSB-------GGGHHHHH
T ss_pred             CeEEEEeCCCCCcCchH-----HHHHHHHHCcc----hHHHHHHHHHcCcccHHHHHHHHHHHhc-------cccHHHHH
Confidence            45899999999998763     34455556321    1111111222222 22222222222211       11112222


Q ss_pred             HHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceE---EEecC----------CCCCCCCCh
Q 025896          101 KLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQV---VILGD----------ECERAKPFP  167 (246)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~---~~~~~----------~~~~~kp~~  167 (246)
                      .......+++||+.++++.|+++|++++++|++....++..++++++.++|..   .+..+          .....++++
T Consensus        68 ~~~~~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~  147 (226)
T d2feaa1          68 SFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCG  147 (226)
T ss_dssp             HHHHHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCS
T ss_pred             HHHHhccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCH
Confidence            22334578999999999999999999999999999999999999998776622   11111          112356678


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          168 DPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ..+..+++++++++++++||||+.+|+.||+.||+.++ +.. ..........+...+++++|  +...++++
T Consensus       148 ~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a-~~~-~~~~~~~~~~~~~~~~d~~~--i~~~l~~~  216 (226)
T d2feaa1         148 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA-RDY-LLNECREQNLNHLPYQDFYE--IRKEIENV  216 (226)
T ss_dssp             SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE-CHH-HHHHHHHTTCCEECCSSHHH--HHHHHHTS
T ss_pred             HHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEE-ecc-hHHHHHHcCCCeeecCCHHH--HHHHHHHH
Confidence            88999999999999999999999999999999996332 211 11222223345667788888  55555544

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=3.4e-23  Score=145.31  Aligned_cols=104  Identities=18%  Similarity=0.278  Sum_probs=81.9

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCC--------H-------HHHHHHHHhcCCCCcceEEEe-----cCCCCCCCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAP--------R-------ENAELMISKLGLSDFFQVVIL-----GDECERAKP  165 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~--------~-------~~~~~~l~~~~l~~~f~~~~~-----~~~~~~~kp  165 (246)
                      .+.++||+.++|+.|++.|++++++||.+        .       ..+...+...|+.  ++.++.     .++....||
T Consensus        28 ~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~i~~~~~~~~~~~~~~KP  105 (161)
T d2fpwa1          28 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKP  105 (161)
T ss_dssp             GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTT
T ss_pred             HceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc--cceeeecccccccccccccc
Confidence            57899999999999999999999999964        1       2234555666664  344333     344567899


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCC
Q 025896          166 FPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRN  211 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~  211 (246)
                      +|.++..++++++++|++++||||+..|+++|+++|++++++.+++
T Consensus       106 ~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~  151 (161)
T d2fpwa1         106 KVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  151 (161)
T ss_dssp             SSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             ccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence            9999999999999999999999999999999999999999997664

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.87  E-value=2.5e-22  Score=146.82  Aligned_cols=118  Identities=19%  Similarity=0.238  Sum_probs=89.5

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCH---------------HHHHHHHHhcCCCCcceEEEecC------------
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPR---------------ENAELMISKLGLSDFFQVVILGD------------  158 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~---------------~~~~~~l~~~~l~~~f~~~~~~~------------  158 (246)
                      ..+++||+.++|++|+++|++++|+||.+.               ..+...+...|+.  ++.++.+.            
T Consensus        46 ~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~~~~~~~~~  123 (209)
T d2o2xa1          46 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIP  123 (209)
T ss_dssp             GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCS
T ss_pred             HeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccc--cceEEEeccccccccccccc
Confidence            467899999999999999999999998531               1233444455543  33333321            


Q ss_pred             CCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCC
Q 025896          159 ECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD  230 (246)
Q Consensus       159 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~e  230 (246)
                      +...+||+|.++..+++++++++++++||||+.+|+++|+++|++++++.++....     .+++.+.++.+
T Consensus       124 ~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~-----~~~~~~~~~~~  190 (209)
T d2o2xa1         124 DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAV-----QPGFAIRPLRD  190 (209)
T ss_dssp             SCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEE-----ETTEEEEEESS
T ss_pred             ccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcc-----cCCccccCccc
Confidence            22346999999999999999999999999999999999999999999998775332     24455555554

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.2e-22  Score=148.91  Aligned_cols=193  Identities=17%  Similarity=0.201  Sum_probs=113.3

Q ss_pred             CCcceEEEeCCCccccChhhHHHHHHHHHHHhcCCCCCCCchHHHHHHhcCC-CHHHHHHHhCCCCchhhhhhHHHHHHH
Q 025896           20 APLEAVLFDVDGTLCDSDPLHHYAFREMLQEIGFNDGVPITEDFFVENIAGK-HNIDIAKILFPDDLPRGLKFCEDKEAM   98 (246)
Q Consensus        20 ~~~k~iifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (246)
                      ...++|+|||||||++.+     .+..+...+|...  ... ......+.|. ...+.+....    .....   .....
T Consensus         8 ~~~~aV~FD~DGTLi~~e-----~~~~l~~~~g~~~--~~~-~~~~~~~~g~~~~~~~~~~~~----~~~~~---~~~~~   72 (217)
T d1nnla_           8 YSADAVCFDVDSTVIREE-----GIDELAKICGVED--AVS-EMTRRAMGGAVPFKAALTERL----ALIQP---SREQV   72 (217)
T ss_dssp             HHCSEEEEETBTTTBSSC-----HHHHHHHHTTCTT--TC-------------CHHHHHHHHH----HHHCC---CHHHH
T ss_pred             CCCCEEEEcCccccCCcc-----HHHHHHHHcCChH--HHH-HHHHHHHcCCCCHHHHHHHHH----Hhccc---chHHH
Confidence            456899999999999976     3445555664321  111 1111111121 1111111110    00000   11112


Q ss_pred             HHHHhhccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCc--ceE--EEe--cCCCCCCC--------
Q 025896           99 FRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDF--FQV--VIL--GDECERAK--------  164 (246)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~--f~~--~~~--~~~~~~~k--------  164 (246)
                      +.........++||+.+++++||++|++++|+|++....++.+++.+|+...  +..  -+.  +...+..+        
T Consensus        73 ~~~~~~~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~  152 (217)
T d1nnla_          73 QRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESG  152 (217)
T ss_dssp             HHHHHHSCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTT
T ss_pred             HHHHHhhccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccc
Confidence            2222234577899999999999999999999999999999999999999742  210  111  11111111        


Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCCh
Q 025896          165 PFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDP  231 (246)
Q Consensus       165 p~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el  231 (246)
                      .+...++.+.+.  .+++++++|||+.+|+.|++.+|+++ .+. ++...+.....+++++.++.|+
T Consensus       153 ~K~~~v~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~v-a~~-~~~~~~~~~~~ad~~i~~f~el  215 (217)
T d1nnla_         153 GKGKVIKLLKEK--FHFKKIIMIGDGATDMEACPPADAFI-GFG-GNVIRQQVKDNAKWYITDFVEL  215 (217)
T ss_dssp             HHHHHHHHHHHH--HCCSCEEEEESSHHHHTTTTTSSEEE-EEC-SSCCCHHHHHHCSEEESCGGGG
T ss_pred             hHHHHHHHHHhc--cCccccEEEEeCHhhHHHHHhCCceE-EEC-CCHHHHHHHHhCCCEeCCHHHh
Confidence            123344444444  45789999999999999999999864 343 2222233335688999999883

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.85  E-value=3.8e-21  Score=141.24  Aligned_cols=128  Identities=18%  Similarity=0.219  Sum_probs=102.1

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecC----------CCCCCCCChHHHHHHH
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGD----------ECERAKPFPDPYFKAL  174 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~----------~~~~~kp~~~~~~~~~  174 (246)
                      ....+++++.+.++.++.+|..++++|+...........+.+...++...+..+          ....+++++..+..++
T Consensus        72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (210)
T d1j97a_          72 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA  151 (210)
T ss_dssp             HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccccccccccccccccccchhhhHH
Confidence            457889999999999999999999999999888888888888877665544332          2234566778899999


Q ss_pred             HHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHH
Q 025896          175 EMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSAL  237 (246)
Q Consensus       175 ~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l  237 (246)
                      ++++++++++++|||+.||++|++.+|+++++  .   +.+.....|++++++.+..+++.+|
T Consensus       152 ~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--n---a~~~lk~~Ad~vi~~~d~~~vl~~l  209 (210)
T d1j97a_         152 KIEGINLEDTVAVGDGANDISMFKKAGLKIAF--C---AKPILKEKADICIEKRDLREILKYI  209 (210)
T ss_dssp             HHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--S---CCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred             HHhcccccceEEecCCcChHHHHHHCCCCEEE--C---CCHHHHHhCCEEEcCCCHHHHHHHh
Confidence            99999999999999999999999999987554  2   2333456899999977654466554

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=3.2e-22  Score=151.36  Aligned_cols=77  Identities=18%  Similarity=0.206  Sum_probs=64.5

Q ss_pred             ecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCC-hhhhhc--cCCcEEecCCCCh
Q 025896          156 LGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNP-EHVLLE--ANPTFLIKDYDDP  231 (246)
Q Consensus       156 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~-~~~~~~--~~~~~~i~~~~el  231 (246)
                      ..+....+||+|..++.+++++|++|++|+||||++ +|+.+|+++|+.+++|.+|.. ..++..  ..||++++|+.||
T Consensus       168 ~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL  247 (250)
T d2c4na1         168 GRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI  247 (250)
T ss_dssp             CCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred             cccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHh
Confidence            334456789999999999999999999999999998 699999999999999999843 333332  3579999999995


Q ss_pred             h
Q 025896          232 K  232 (246)
Q Consensus       232 ~  232 (246)
                      .
T Consensus       248 ~  248 (250)
T d2c4na1         248 D  248 (250)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.81  E-value=2e-21  Score=147.12  Aligned_cols=73  Identities=21%  Similarity=0.251  Sum_probs=62.0

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCC-Chhhhh--ccCCcEEecCCCChh
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRN-PEHVLL--EANPTFLIKDYDDPK  232 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~-~~~~~~--~~~~~~~i~~~~el~  232 (246)
                      ...+||+|.+|+.+++++|++|++|+||||++ +|+.+|+++|+.+|+|.+|. ...+..  ...||++++|+.|+.
T Consensus       176 ~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~~  252 (253)
T d1wvia_         176 IIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEWD  252 (253)
T ss_dssp             EECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGCC
T ss_pred             EEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHcC
Confidence            34579999999999999999999999999998 59999999999999999883 333332  335899999999854

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.79  E-value=3.1e-20  Score=141.21  Aligned_cols=76  Identities=25%  Similarity=0.301  Sum_probs=64.6

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCC-Chhhhh--ccCCcEEecCCCChhhHH
Q 025896          160 CERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRN-PEHVLL--EANPTFLIKDYDDPKLWS  235 (246)
Q Consensus       160 ~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~-~~~~~~--~~~~~~~i~~~~el~~~~  235 (246)
                      ...+||+|..+..+++++|++|++++||||++ +|+.+|+++|+.+|+|.+|. ...+..  ...|||+++++.|  +..
T Consensus       181 ~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~e--L~~  258 (261)
T d1vjra_         181 LIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGE--LAK  258 (261)
T ss_dssp             EECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHH--HHH
T ss_pred             cccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHH--HHH
Confidence            34689999999999999999999999999997 79999999999999999984 333322  3468999999999  665


Q ss_pred             HH
Q 025896          236 AL  237 (246)
Q Consensus       236 ~l  237 (246)
                      +|
T Consensus       259 ~l  260 (261)
T d1vjra_         259 AV  260 (261)
T ss_dssp             HH
T ss_pred             Hh
Confidence            54

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.79  E-value=2.2e-19  Score=143.16  Aligned_cols=133  Identities=21%  Similarity=0.336  Sum_probs=111.1

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceE--EEecC-----------CCCCCCCChHHHHHHH
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQV--VILGD-----------ECERAKPFPDPYFKAL  174 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~-----------~~~~~kp~~~~~~~~~  174 (246)
                      +|+||+.++|++|+++|++++++|+.+...++..++++|+.++|+.  +++++           .....||+|..+..++
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~  294 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL  294 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHH
Confidence            3677999999999999999999999999999999999999999864  44332           2367899999998887


Q ss_pred             HHc--------------CCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCCh----hhhhccCCcEEecCCCChhhHHH
Q 025896          175 EML--------------KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPE----HVLLEANPTFLIKDYDDPKLWSA  236 (246)
Q Consensus       175 ~~~--------------~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~----~~~~~~~~~~~i~~~~el~~~~~  236 (246)
                      ..+              ++.+++|+||||+.||+.+|+++|+++|+|.+|...    .+..+.+||++++++.|  +..+
T Consensus       295 ~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~e--l~~i  372 (380)
T d1qyia_         295 YGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGE--LRGV  372 (380)
T ss_dssp             HCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGG--HHHH
T ss_pred             HHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHH--HHHH
Confidence            543              567889999999999999999999999999988432    34455689999999999  6776


Q ss_pred             Hhhhhc
Q 025896          237 LEELDK  242 (246)
Q Consensus       237 l~~~~~  242 (246)
                      |..+-+
T Consensus       373 l~~l~~  378 (380)
T d1qyia_         373 LDNLLE  378 (380)
T ss_dssp             HSCTTT
T ss_pred             HHHHHh
Confidence            665543

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.78  E-value=2.3e-20  Score=141.28  Aligned_cols=77  Identities=19%  Similarity=0.294  Sum_probs=64.0

Q ss_pred             ecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHHhcCCCEEEEcCCCC-hhh--hhccCCcEEecCCCCh
Q 025896          156 LGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGVAAGLPVVGLTTRNP-EHV--LLEANPTFLIKDYDDP  231 (246)
Q Consensus       156 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~~G~~~i~v~~~~~-~~~--~~~~~~~~~i~~~~el  231 (246)
                      .......+||+|.++..+++++|++|++++||||++ +|+.+|+++|+.+++|.+|.. ...  .....||++++|+.|+
T Consensus       172 ~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~  251 (253)
T d1yv9a1         172 QTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW  251 (253)
T ss_dssp             TCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred             cceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence            344456799999999999999999999999999997 699999999999999988832 222  2234589999999985


Q ss_pred             h
Q 025896          232 K  232 (246)
Q Consensus       232 ~  232 (246)
                      .
T Consensus       252 ~  252 (253)
T d1yv9a1         252 T  252 (253)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.71  E-value=4.1e-18  Score=118.35  Aligned_cols=104  Identities=5%  Similarity=-0.092  Sum_probs=73.6

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHH---HHHHHHhcC-----C-CCcceEEEecCCCCCCCCChHHHHHHHHH
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPREN---AELMISKLG-----L-SDFFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~---~~~~l~~~~-----l-~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      ...++|++.++|+.|++.|+.++++||.+...   ....+...+     + ...++....... +..+|........+.+
T Consensus        34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~k~~~l~~  112 (149)
T d1ltqa1          34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQ-GDTRKDDVVKEEIFWK  112 (149)
T ss_dssp             GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCT-TCCSCHHHHHHHHHHH
T ss_pred             cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccc-cccCCchHHHHHHHHH
Confidence            46789999999999999999999999986321   122222211     1 122344333332 3455666677777877


Q ss_pred             cCCCCCc-EEEEecChhhhHHHHhcCCCEEEEcCC
Q 025896          177 LKVSKDH-TFVFEDSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       177 ~~~~~~~-~~~igD~~~Di~~a~~~G~~~i~v~~~  210 (246)
                      +...+.+ +++|||+..|+++|+++|++++.|.+|
T Consensus       113 ~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1         113 HIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             HTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             hccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence            7666655 567899999999999999999999876

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=8.1e-18  Score=122.81  Aligned_cols=130  Identities=15%  Similarity=0.206  Sum_probs=95.8

Q ss_pred             ccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCC----CCCCCCChHHHHHHHHHcCCC
Q 025896          105 EQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDE----CERAKPFPDPYFKALEMLKVS  180 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~----~~~~kp~~~~~~~~~~~~~~~  180 (246)
                      ......++...++..++ .++..+++|.+...........++....+........    .....+++......++.++++
T Consensus        66 ~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  144 (206)
T d1rkua_          66 ATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL  144 (206)
T ss_dssp             TTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHT
T ss_pred             hhccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhccc
Confidence            35677888888887775 5689999999988888888888888765544332221    123445566778899999999


Q ss_pred             CCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEe-cCCCChhhHHHHhhhh
Q 025896          181 KDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLI-KDYDDPKLWSALEELD  241 (246)
Q Consensus       181 ~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i-~~~~el~~~~~l~~~~  241 (246)
                      ++++++|||+.||++|++.||+++++ +   ..++.....++++. ++..|  +...+.+..
T Consensus       145 ~~eviaiGDg~NDi~Ml~~Ag~gIAm-n---a~~~v~~~~~~~~~~~~~~d--~~~~~~~~~  200 (206)
T d1rkua_         145 YYRVIAAGDSYNDTTMLSEAHAGILF-H---APENVIREFPQFPAVHTYED--LKREFLKAS  200 (206)
T ss_dssp             TCEEEEEECSSTTHHHHHHSSEEEEE-S---CCHHHHHHCTTSCEECSHHH--HHHHHHHHC
T ss_pred             ccceEEecCCccCHHHHHhCCccEEE-C---CCHHHHHhCCCceeecCHHH--HHHHHHHHh
Confidence            99999999999999999999987665 2   34555666778854 56666  665555543

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.69  E-value=6.4e-17  Score=120.04  Aligned_cols=104  Identities=15%  Similarity=0.025  Sum_probs=73.4

Q ss_pred             CHHHHHHHHHhcCCCCcc-eEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCC
Q 025896          134 PRENAELMISKLGLSDFF-QVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNP  212 (246)
Q Consensus       134 ~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~  212 (246)
                      .....+..+++++..-.+ ......+......+++..++.++++++++++++++|||+.||+.|++.+|+++++   ++ 
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav---~n-  195 (230)
T d1wr8a_         120 NVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV---AQ-  195 (230)
T ss_dssp             CHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC---TT-
T ss_pred             cHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEE---CC-
Confidence            344566667766543211 1111112235677889999999999999999999999999999999999975443   22 


Q ss_pred             hhhhhccCCcEEecCCCChhhHHHHhhhh
Q 025896          213 EHVLLEANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       213 ~~~~~~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                      +.+.....+++++.+..+-++...++.+-
T Consensus       196 a~~~~k~~A~~v~~~~~~~gv~~~i~~~l  224 (230)
T d1wr8a_         196 APKILKENADYVTKKEYGEGGAEAIYHIL  224 (230)
T ss_dssp             SCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred             CCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence            33445668999999988877777776543

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=4.9e-16  Score=118.20  Aligned_cols=73  Identities=15%  Similarity=0.069  Sum_probs=59.4

Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhhh
Q 025896          165 PFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELD  241 (246)
Q Consensus       165 p~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~  241 (246)
                      .+..+++.+++.++++++++++|||+.||++|++.+|.++++-   +..++ ....+++++.+..+-++...++++-
T Consensus       197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~---na~~~-lk~~a~~i~~~~~~~Gv~~~l~~~~  269 (271)
T d1rkqa_         197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD---NAIPS-VKEVANFVTKSNLEDGVAFAIEKYV  269 (271)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT---TSCHH-HHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred             CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC---CCCHH-HHHhCCEEcCCCCcChHHHHHHHHh
Confidence            3556789999999999999999999999999999999665443   33333 4457899999999999999888753

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.59  E-value=1.1e-17  Score=124.20  Aligned_cols=77  Identities=14%  Similarity=0.066  Sum_probs=61.6

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      .....+..+++.++++++++++++++|||+.||+.|++.+|++++ +.  +.. +.....|++++++....++..+++.+
T Consensus       147 ~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~va-v~--na~-~~~k~~ad~v~~~~~~~gi~~~l~~~  222 (225)
T d1l6ra_         147 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKAC-PA--NAT-DNIKAVSDFVSDYSYGEEIGQIFKHF  222 (225)
T ss_dssp             ETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEE-CT--TSC-HHHHHHCSEECSCCTTHHHHHHHHHT
T ss_pred             CCccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEE-EC--CCc-HHHHHhCCEEECCCCcCHHHHHHHHh
Confidence            334456788999999999999999999999999999999997543 32  223 33445789999999998899988875


Q ss_pred             h
Q 025896          241 D  241 (246)
Q Consensus       241 ~  241 (246)
                      .
T Consensus       223 ~  223 (225)
T d1l6ra_         223 E  223 (225)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=99.59  E-value=1.6e-16  Score=121.74  Aligned_cols=75  Identities=15%  Similarity=0.062  Sum_probs=61.4

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          162 RAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       162 ~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ..-.|..+++.+++.+|++++++++|||+.||+.|++.+|.++++-    +..+.....|++++.+..+-++...|+++
T Consensus       210 ~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~----na~~~~k~~A~~v~~~~~~~Gv~~~l~~l  284 (285)
T d1nrwa_         210 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG----NAREDIKSIADAVTLTNDEHGVAHMMKHL  284 (285)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT----TCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred             ccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC----CCCHHHHHhCCEEcCCCCccHHHHHHHHh
Confidence            3445788999999999999999999999999999999999765444    23344446789999999998998888765

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=7.9e-15  Score=111.32  Aligned_cols=77  Identities=10%  Similarity=0.031  Sum_probs=63.3

Q ss_pred             CCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhhhc
Q 025896          163 AKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEELDK  242 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~~~  242 (246)
                      .-.+..+++.+++++|++++++++|||+.||++|.+.+|.++++-   + +.+.....|++++.+..+-++...++++-.
T Consensus       188 ~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~---N-a~~~lk~~A~~v~~~~~~~Gva~~i~~~l~  263 (269)
T d1rlma_         188 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG---N-AAENIKQIARYATDDNNHEGALNVIQAVLD  263 (269)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT---T-CCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred             chHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC---C-CCHHHHHhCCEEcCCCCccHHHHHHHHHHh
Confidence            345678899999999999999999999999999999999765544   2 334444678999999999999988887765


Q ss_pred             C
Q 025896          243 N  243 (246)
Q Consensus       243 ~  243 (246)
                      +
T Consensus       264 ~  264 (269)
T d1rlma_         264 N  264 (269)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=99.56  E-value=4.1e-16  Score=118.49  Aligned_cols=79  Identities=16%  Similarity=0.122  Sum_probs=64.9

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ..+..|..+++.++++++++++++++|||+.||++|++.+|.++++   ++.. +.....|++++.+..+-++..+++++
T Consensus       186 ~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~---~na~-~~~k~~A~~i~~~~~~~Gva~~i~~l  261 (267)
T d1nf2a_         186 PKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM---ENAI-EKVKEASDIVTLTNNDSGVSYVLERI  261 (267)
T ss_dssp             CTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC---TTSC-HHHHHHCSEECCCTTTTHHHHHHTTB
T ss_pred             CCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe---CCCC-HHHHHhCCEEcCCCCccHHHHHHHHH
Confidence            4455678899999999999999999999999999999999975433   3333 44556889999999999999999887


Q ss_pred             hcC
Q 025896          241 DKN  243 (246)
Q Consensus       241 ~~~  243 (246)
                      -.+
T Consensus       262 l~~  264 (267)
T d1nf2a_         262 STD  264 (267)
T ss_dssp             CBS
T ss_pred             Hhc
Confidence            653

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=99.44  E-value=5.6e-13  Score=101.47  Aligned_cols=76  Identities=11%  Similarity=-0.004  Sum_probs=57.2

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCC-CChhhHHHHhhh
Q 025896          162 RAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDY-DDPKLWSALEEL  240 (246)
Q Consensus       162 ~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~-~el~~~~~l~~~  240 (246)
                      ....+...+..+++.++++++++++|||+.||+.|++.+|.++++-   +.. +.....+++++.+. .+-++..+++++
T Consensus       204 ~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~---na~-~~~k~~a~~v~~~~~~~g~v~~~l~~~  279 (283)
T d2b30a1         204 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA---NAT-DSAKSHAKCVLPVSHREGAVAYLLKKV  279 (283)
T ss_dssp             TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT---TCC-HHHHHHSSEECSSCTTTTHHHHHHHHH
T ss_pred             CcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC---CCC-HHHHHhCCEEECCcCCCcHHHHHHHHH
Confidence            3455678899999999999999999999999999999999765432   323 33445778999754 444466777665


Q ss_pred             h
Q 025896          241 D  241 (246)
Q Consensus       241 ~  241 (246)
                      -
T Consensus       280 ~  280 (283)
T d2b30a1         280 F  280 (283)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.41  E-value=1.3e-12  Score=92.91  Aligned_cols=95  Identities=22%  Similarity=0.296  Sum_probs=76.6

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCC--------HH----HHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHH
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAP--------RE----NAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEM  176 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~--------~~----~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  176 (246)
                      ++|++.+.|+.|++.|+.++|+||-+        ..    .....++.++..  +...++......+||++.++..++++
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~~~~~~~RKP~~GM~~~~~~~  128 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQ  128 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSSSSTTSTHHHHHHHHT
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEecCccccCCCccHHHHHHHHH
Confidence            47999999999999999999999963        22    234555666654  45555566667899999999999999


Q ss_pred             cC----CCCCcEEEEecC-----------------hhhhHHHHhcCCCEE
Q 025896          177 LK----VSKDHTFVFEDS-----------------VSGIKAGVAAGLPVV  205 (246)
Q Consensus       177 ~~----~~~~~~~~igD~-----------------~~Di~~a~~~G~~~i  205 (246)
                      ++    ++.++++||||.                 -.|+..|.++|+++.
T Consensus       129 ~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         129 ANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             SSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             hcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence            85    788999999995                 389999999999854

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.40  E-value=8.9e-14  Score=104.94  Aligned_cols=77  Identities=12%  Similarity=0.167  Sum_probs=62.2

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ..+..+..+++.+++++|++++++++|||+.||+.|.+.+|..+ .+.+   +.+.....+++++.+..+-++...|+.+
T Consensus       182 p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~sv-av~n---a~~~lk~~A~~vt~~~~~~Gv~~~l~~~  257 (260)
T d2rbka1         182 AKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGV-AMGQ---AKEDVKAAADYVTAPIDEDGISKAMKHF  257 (260)
T ss_dssp             STTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTT---SCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred             eCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEE-EeCC---CCHHHHHhCCEEeCCCCccHHHHHHHHh
Confidence            34556778899999999999999999999999999999999854 4422   2333445778999999998999988876


Q ss_pred             h
Q 025896          241 D  241 (246)
Q Consensus       241 ~  241 (246)
                      +
T Consensus       258 ~  258 (260)
T d2rbka1         258 G  258 (260)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=99.30  E-value=6.8e-12  Score=92.40  Aligned_cols=38  Identities=11%  Similarity=-0.040  Sum_probs=30.9

Q ss_pred             HHHHHH---HHcCCCCCcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          169 PYFKAL---EMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       169 ~~~~~~---~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      ..+.++   +++|++++++++|||+.||++|++.+|.+ |.|
T Consensus       188 ~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~-vaV  228 (232)
T d1xvia_         188 AANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIV  228 (232)
T ss_dssp             HHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EEC
T ss_pred             HHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeE-EEE
Confidence            344444   45699999999999999999999999974 444

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.30  E-value=5.1e-12  Score=93.85  Aligned_cols=44  Identities=7%  Similarity=-0.034  Sum_probs=36.6

Q ss_pred             CCChHHHHHHHHHc-CCCCCcEEEEecChhhhHHHHhcCCCEEEE
Q 025896          164 KPFPDPYFKALEML-KVSKDHTFVFEDSVSGIKAGVAAGLPVVGL  207 (246)
Q Consensus       164 kp~~~~~~~~~~~~-~~~~~~~~~igD~~~Di~~a~~~G~~~i~v  207 (246)
                      -.+..++..+++++ +++++++++|||+.||++|.+.+|.++++-
T Consensus       178 ~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~  222 (243)
T d1wzca1         178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG  222 (243)
T ss_dssp             CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES
T ss_pred             hccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeC
Confidence            33556688889988 488999999999999999999999765554

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=99.28  E-value=3.8e-11  Score=85.38  Aligned_cols=96  Identities=15%  Similarity=0.126  Sum_probs=70.0

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHH---HHHHHHH-hcCCC--CcceEEEecCCCCCCCCChHHHHHHHHHcCC
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRE---NAELMIS-KLGLS--DFFQVVILGDECERAKPFPDPYFKALEMLKV  179 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~---~~~~~l~-~~~l~--~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  179 (246)
                      ...+.||+.++++.++++|++|+.+||+...   .....|. .+|+.  ..-+.++..+.  ..|..   -+..++++++
T Consensus        84 ~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~--~~K~~---rr~~Ik~y~I  158 (209)
T d2b82a1          84 FSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK--PGQNT---KSQWLQDKNI  158 (209)
T ss_dssp             GCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC--TTCCC---SHHHHHHTTE
T ss_pred             ccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC--CCchH---HHHHHHHcCe
Confidence            3567899999999999999999999998642   3445554 47774  32333443332  22222   3445577777


Q ss_pred             CCCcEEEEecChhhhHHHHhcCCCEEEEcCC
Q 025896          180 SKDHTFVFEDSVSGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       180 ~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~  210 (246)
                          ++++||..+|+.+|+++|++.+.+.+.
T Consensus       159 ----~l~~GD~l~Df~aA~eagi~~iRi~r~  185 (209)
T d2b82a1         159 ----RIFYGDSDNDITAARDVGARGIRILRA  185 (209)
T ss_dssp             ----EEEEESSHHHHHHHHHTTCEEEECCCC
T ss_pred             ----EEEecCCHHHHhHHHHcCCCceEeecc
Confidence                899999999999999999999999765

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.26  E-value=1e-11  Score=94.00  Aligned_cols=97  Identities=10%  Similarity=0.075  Sum_probs=67.1

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEe-----cCCC---CCCCC------ChHHHH
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVIL-----GDEC---ERAKP------FPDPYF  171 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~-----~~~~---~~~kp------~~~~~~  171 (246)
                      .+.+.||+.++++.|+++|++++|+|++-...++.+++++|+..---.+++     .++.   +...|      +.....
T Consensus       133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~  212 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL  212 (291)
T ss_dssp             CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence            578999999999999999999999999999999999999987631111222     1111   11111      112222


Q ss_pred             HHHHH--cCCCCCcEEEEecChhhhHHHHhcCC
Q 025896          172 KALEM--LKVSKDHTFVFEDSVSGIKAGVAAGL  202 (246)
Q Consensus       172 ~~~~~--~~~~~~~~~~igD~~~Di~~a~~~G~  202 (246)
                      .....  ..-+..++++||||.+|+.||..+..
T Consensus       213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~  245 (291)
T d2bdua1         213 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVAN  245 (291)
T ss_dssp             TTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSC
T ss_pred             hhHHHHhccCCcCcEEEEeCCHhHHHHHhCCcc
Confidence            22222  23356789999999999999987643

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.16  E-value=2.4e-10  Score=76.37  Aligned_cols=106  Identities=12%  Similarity=0.092  Sum_probs=76.3

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFV  186 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  186 (246)
                      -.+.|++.+.++.|++.|++++++|+.+......+.+.+|+..+|.           ...|+-...+.++++.. ..++|
T Consensus        20 D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~~-----------~~~p~~k~~~v~~~q~~-~~v~~   87 (135)
T d2b8ea1          20 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA-----------EVLPHQKSEEVKKLQAK-EVVAF   87 (135)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC-----------SCCHHHHHHHHHHHTTT-SCEEE
T ss_pred             CCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhcc-----------ccchhHHHHHHHHHHcC-CEEEE
Confidence            4678999999999999999999999999999999999999864331           12344445566666543 57899


Q ss_pred             EecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCC
Q 025896          187 FEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDY  228 (246)
Q Consensus       187 igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~  228 (246)
                      +||+.||..+.+.+++...+- .   ..+.....+|+++-+-
T Consensus        88 vGDg~nD~~aL~~Advgia~~-~---~~~~~~~aADivl~~~  125 (135)
T d2b8ea1          88 VGDGINDAPALAQADLGIAVG-S---GSDVAVESGDIVLIRD  125 (135)
T ss_dssp             EECSSSSHHHHHHSSEEEEEC-C---C--------SEEESSC
T ss_pred             EeCCCCcHHHHHhCCeeeecC-c---cCHHHHHhCCEEEECC
Confidence            999999999999999764443 2   2344456788888653

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=99.15  E-value=3.5e-11  Score=89.46  Aligned_cols=75  Identities=12%  Similarity=0.044  Sum_probs=52.5

Q ss_pred             CCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhh------hccCCcEEecCCCChhhHHH
Q 025896          163 AKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVL------LEANPTFLIKDYDDPKLWSA  236 (246)
Q Consensus       163 ~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~------~~~~~~~~i~~~~el~~~~~  236 (246)
                      +..+..+++.+++++|++++++++|||+.||++|.+.+|.++++- +.  .++.      ......|+.++...-++++.
T Consensus       160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~-na--~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~  236 (244)
T d1s2oa1         160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NA--QPELLHWYDQWGDSRHYRAQSSHAGAILEA  236 (244)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TC--CHHHHHHHHHHCCTTEEECSSCHHHHHHHH
T ss_pred             ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeC-CC--CHHHHHHhhcccccceEEcCCCCccHHHHH
Confidence            444567899999999999999999999999999999999654433 22  2221      11233356666666667776


Q ss_pred             Hhhh
Q 025896          237 LEEL  240 (246)
Q Consensus       237 l~~~  240 (246)
                      ++..
T Consensus       237 l~~f  240 (244)
T d1s2oa1         237 IAHF  240 (244)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            6543

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=99.13  E-value=2.2e-10  Score=80.39  Aligned_cols=104  Identities=14%  Similarity=0.146  Sum_probs=85.5

Q ss_pred             HHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhH
Q 025896          116 VKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIK  195 (246)
Q Consensus       116 ~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~  195 (246)
                      .+..|++.|+.++++|.............+++...+.         ..+++...++.+++++++++++++||||+.||++
T Consensus        40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~~~---------~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~  110 (177)
T d1k1ea_          40 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFL---------GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLP  110 (177)
T ss_dssp             HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEE---------SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             HHHHHhhhcEEEEEecCCchhHHHHHHhhhccccccc---------ccccHHHHHHHHHHHhcCCcceeEEecCCccHHH
Confidence            4778889999999999999899999999888764332         2445677889999999999999999999999999


Q ss_pred             HHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChh
Q 025896          196 AGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPK  232 (246)
Q Consensus       196 ~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~  232 (246)
                      +.+.+|++++..    ++.+.....++++..+-..-+
T Consensus       111 ~l~~~g~siap~----nA~~~vk~~A~~Vt~~~GG~G  143 (177)
T d1k1ea_         111 AFAACGTSFAVA----DAPIYVKNAVDHVLSTHGGKG  143 (177)
T ss_dssp             HHHHSSEEEECT----TSCHHHHTTSSEECSSCTTTT
T ss_pred             HHhhCCeEEEcC----CccHHHHHhCCEEeCCCCCCc
Confidence            999999866555    445556678999999877544

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.96  E-value=6.3e-10  Score=81.40  Aligned_cols=67  Identities=12%  Similarity=0.060  Sum_probs=46.7

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHhhh
Q 025896          161 ERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALEEL  240 (246)
Q Consensus       161 ~~~kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~~~  240 (246)
                      ..+..+..+++.++++     +++++|||+.||+.|.+.+|..+ .+..|+.     +..|.+++++..|  +..+|+.+
T Consensus       155 p~g~~Kg~al~~l~~~-----~~~i~~GDs~ND~~Mf~~~~~~~-av~~g~~-----~~~A~~~~~~~~e--v~~~l~~l  221 (229)
T d1u02a_         155 VPGVNKGSAIRSVRGE-----RPAIIAGDDATDEAAFEANDDAL-TIKVGEG-----ETHAKFHVADYIE--MRKILKFI  221 (229)
T ss_dssp             CTTCCHHHHHHHHHTT-----SCEEEEESSHHHHHHHHTTTTSE-EEEESSS-----CCCCSEEESSHHH--HHHHHHHH
T ss_pred             cCCCCHHHHHHHHhcc-----ccceeecCCCChHHHHhccCCeE-EEEeCCC-----CccCeEEcCCHHH--HHHHHHHH
Confidence            3455566777777654     68999999999999999998753 3333322     2578899999988  44444433

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=1.3e-08  Score=72.65  Aligned_cols=107  Identities=19%  Similarity=0.204  Sum_probs=70.7

Q ss_pred             ccCCCcccHHHHHHHHHHcC-CeEEEEeCCCHH------HHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHc
Q 025896          105 EQLKPISGLDKVKKWIEDRG-LKRAAVTNAPRE------NAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEML  177 (246)
Q Consensus       105 ~~~~~~~~~~~~l~~l~~~g-~~i~i~s~~~~~------~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~  177 (246)
                      ..++++||+.+++++|++.| +.+.++|.....      .-...+++.......+.++.+.+    |-            
T Consensus        71 ~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~----K~------------  134 (195)
T d1q92a_          71 FELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD----KT------------  134 (195)
T ss_dssp             TTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC----ST------------
T ss_pred             hhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc----cc------------
Confidence            46899999999999999865 567788876432      22334555422211233333321    21            


Q ss_pred             CCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCC
Q 025896          178 KVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDD  230 (246)
Q Consensus       178 ~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~e  230 (246)
                      .+.  --++|+|++..+..+..+|+++++++.++++.-.. ....+.+.++.|
T Consensus       135 ~~~--~d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~-~~~~~Rv~~W~e  184 (195)
T d1q92a_         135 VVS--ADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQL-QPPRRRLHSWAD  184 (195)
T ss_dssp             TSC--CSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCC-CTTCEEECCTTS
T ss_pred             eec--CeEEecCcHHHHHHHhcCCCeEEEECCCcccCCCC-CCCceeeCCHHH
Confidence            111  13899999999999999999999998887665321 234578999999

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.88  E-value=7.1e-09  Score=71.86  Aligned_cols=128  Identities=17%  Similarity=0.175  Sum_probs=87.7

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcc----eEEEecCC----------------CCCCCCC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFF----QVVILGDE----------------CERAKPF  166 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~----------------~~~~kp~  166 (246)
                      -++.+++.+.++.|++.|++++++|+.+......+.+++|+...-    +..+.+.+                .-...-.
T Consensus        19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~   98 (168)
T d1wpga2          19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE   98 (168)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred             CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence            467899999999999999999999999999999999999985321    11111100                0112234


Q ss_pred             hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhcCCCEEEEcCCCChhhhhccCCcEEecCCCChhhHHHHh
Q 025896          167 PDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLPVVGLTTRNPEHVLLEANPTFLIKDYDDPKLWSALE  238 (246)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~~~l~  238 (246)
                      |+-...+.+.++-....+.|+||+.||..+.+.+.+.... ..   ..+.....+++++.+-+=-.++.+++
T Consensus        99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~-~~---gt~~a~~aAdivl~~~~l~~v~~~I~  166 (168)
T d1wpga2          99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM-GS---GTAVAKTASEMVLADDNFSTIVAAVE  166 (168)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-TT---SCHHHHHTCSEEETTCCTHHHHHHHH
T ss_pred             hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe-cc---ccHHHHHhCCEEEccCCHHHHHHHHH
Confidence            4445556666655567799999999999999999965433 22   22344457888887643333555443

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=1.6e-08  Score=74.29  Aligned_cols=45  Identities=7%  Similarity=-0.147  Sum_probs=31.7

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEec----ChhhhHHHHhcCCCEEEEcC
Q 025896          162 RAKPFPDPYFKALEMLKVSKDHTFVFED----SVSGIKAGVAAGLPVVGLTT  209 (246)
Q Consensus       162 ~~kp~~~~~~~~~~~~~~~~~~~~~igD----~~~Di~~a~~~G~~~i~v~~  209 (246)
                      .+..|..+++.++   +++++++++|||    +.||++|.+.+|...++++.
T Consensus       182 ~~vsKg~al~~l~---~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~  230 (243)
T d2amya1         182 DGWDKRYCLRHVE---NDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA  230 (243)
T ss_dssp             TTCSGGGGGGGTT---TSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred             cccCHHHHHHHHh---CCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence            3344444555543   678899999999    66999999999966676643

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=1.7e-08  Score=74.09  Aligned_cols=43  Identities=7%  Similarity=-0.174  Sum_probs=33.6

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCh----hhhHHHHhcCCCEEEE
Q 025896          162 RAKPFPDPYFKALEMLKVSKDHTFVFEDSV----SGIKAGVAAGLPVVGL  207 (246)
Q Consensus       162 ~~kp~~~~~~~~~~~~~~~~~~~~~igD~~----~Di~~a~~~G~~~i~v  207 (246)
                      .+..+..+++.+++   .+++++++|||+.    ||++|.+.+|...+.|
T Consensus       182 ~~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av  228 (244)
T d2fuea1         182 EGWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV  228 (244)
T ss_dssp             TTCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC
T ss_pred             hhccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEc
Confidence            44556677777664   5889999999975    9999999999655666

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=98.66  E-value=7.3e-07  Score=70.41  Aligned_cols=102  Identities=17%  Similarity=0.059  Sum_probs=76.9

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhc---------CCCCcceEEEecCC-----------------CC-
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKL---------GLSDFFQVVILGDE-----------------CE-  161 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~---------~l~~~f~~~~~~~~-----------------~~-  161 (246)
                      .-|.+..+|.+|+++|.++.++||++..+....+..+         .+.++||.|++...                 .+ 
T Consensus       186 k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g~  265 (458)
T d2bdea1         186 REKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGT  265 (458)
T ss_dssp             CCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTCC
T ss_pred             CChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCCc
Confidence            4678999999999999999999999998877666542         45689999887521                 00 


Q ss_pred             ------CCCCC---hHHHHHHHHHcCCCCCcEEEEecCh-hhhHHHH-hcCCCEEEEcCC
Q 025896          162 ------RAKPF---PDPYFKALEMLKVSKDHTFVFEDSV-SGIKAGV-AAGLPVVGLTTR  210 (246)
Q Consensus       162 ------~~kp~---~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~-~~G~~~i~v~~~  210 (246)
                            ..+|.   ......+.+.+|....++++|||+. .||...+ ..|+.+++|-..
T Consensus       266 l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  325 (458)
T d2bdea1         266 MTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  325 (458)
T ss_dssp             EEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred             cccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence                  00110   1125677788899989999999999 8987665 579999999655

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=98.38  E-value=1.1e-06  Score=57.00  Aligned_cols=48  Identities=8%  Similarity=0.066  Sum_probs=39.0

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCC---------------HHHHHHHHHhcCCCCcceEEEe
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAP---------------RENAELMISKLGLSDFFQVVIL  156 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~---------------~~~~~~~l~~~~l~~~f~~~~~  156 (246)
                      ..|.+++++.+..|++.|+.+++.|++.               .......|+..|+.  ||.++.
T Consensus        23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~--Yd~Li~   85 (124)
T d1xpja_          23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP--YDEILV   85 (124)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC--CSEEEE
T ss_pred             cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC--ceEEEE
Confidence            5688999999999999999999999984               23466778888885  676664

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.14  E-value=3.3e-06  Score=54.64  Aligned_cols=46  Identities=15%  Similarity=-0.013  Sum_probs=36.0

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHH---HHHHHHhcCCCCcceEE
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPREN---AELMISKLGLSDFFQVV  154 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~---~~~~l~~~~l~~~f~~~  154 (246)
                      .+|.+++.++|+.|++.|+.|++.|++....   ....|.+.|+.  |+.+
T Consensus        20 ~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~--yd~i   68 (122)
T d2obba1          20 GEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE--FYAA   68 (122)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC--CSEE
T ss_pred             ccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC--ceeh
Confidence            3578899999999999999999999997654   44566666765  4443

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.83  E-value=0.00039  Score=49.42  Aligned_cols=129  Identities=17%  Similarity=0.075  Sum_probs=83.8

Q ss_pred             hccCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCC-CCCCCC----------------
Q 025896          104 SEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDEC-ERAKPF----------------  166 (246)
Q Consensus       104 ~~~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~-~~~kp~----------------  166 (246)
                      ....++.||+.+.|+.+++. .+-+|+|.+...+++....++|+.  ++...+.-+. ....|+                
T Consensus        77 E~~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp--~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~  153 (308)
T d1y8aa1          77 ELSAKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR--GELHGTEVDFDSIAVPEGLREELLSIIDVIASL  153 (308)
T ss_dssp             HHHCCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC--SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHC
T ss_pred             hhceeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC--ceeecccccccccCCChHHHHHHHHHhhhccCc
Confidence            34689999999999999988 899999999999999999999884  3322211111 111111                


Q ss_pred             ---------------------------------hHHHHHHHHHcCCCCCcEEEEecChhhhHHHHhc-CCCEEEEcCCCC
Q 025896          167 ---------------------------------PDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAA-GLPVVGLTTRNP  212 (246)
Q Consensus       167 ---------------------------------~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~~-G~~~i~v~~~~~  212 (246)
                                                       ....+..++..++.+  .++||||-.|+++.+.+ |-.-+.++-.++
T Consensus       154 ~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~--~~~VGDSITDve~Lr~~r~~gGlaIsFNGN  231 (308)
T d1y8aa1         154 SGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDF--PVVVGDSISDYKMFEAARGLGGVAIAFNGN  231 (308)
T ss_dssp             CHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSS--CEEEECSGGGHHHHHHHHHTTCEEEEESCC
T ss_pred             cHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCc--ceeccCccccHHHHHHHhcCCCeeEEecCc
Confidence                                             112334445556755  49999999999998876 323444444434


Q ss_pred             hhhhhccCCcEEecCCCChhhHHHHhh
Q 025896          213 EHVLLEANPTFLIKDYDDPKLWSALEE  239 (246)
Q Consensus       213 ~~~~~~~~~~~~i~~~~el~~~~~l~~  239 (246)
                      ...+  ..|+..|-|-+...+..++.-
T Consensus       232 ~Yal--~eA~VaiiS~~~~a~~~i~dl  256 (308)
T d1y8aa1         232 EYAL--KHADVVIISPTAMSEAKVIEL  256 (308)
T ss_dssp             HHHH--TTCSEEEECSSTHHHHHHHHH
T ss_pred             cccc--cccceEEeccchhHHHHHHHH
Confidence            4444  356676666666555555443

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.8e-05  Score=55.13  Aligned_cols=94  Identities=13%  Similarity=0.164  Sum_probs=70.1

Q ss_pred             cCCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 025896          106 QLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTF  185 (246)
Q Consensus       106 ~~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  185 (246)
                      .+...||+.++|+++.+. +.++|.|.+...++..+++.+.-...|...+..+......+.   +.+-++.+|-+.++++
T Consensus        53 ~v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~~~~---~~KdL~~l~~~l~~vv  128 (181)
T d1ta0a_          53 YVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRGN---YVKDLSRLGRDLRRVL  128 (181)
T ss_dssp             EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEETTE---EECCGGGSCSCGGGEE
T ss_pred             EEecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeecCCc---ccccHhhcCCCHHHeE
Confidence            367899999999999988 999999999999999999999877777766655443222211   1234566788889999


Q ss_pred             EEecChhhhHHHHhcCCC
Q 025896          186 VFEDSVSGIKAGVAAGLP  203 (246)
Q Consensus       186 ~igD~~~Di~~a~~~G~~  203 (246)
                      +|+|+..-...-..-|+.
T Consensus       129 ivDd~~~~~~~~~~N~I~  146 (181)
T d1ta0a_         129 ILDNSPASYVFHPDNAVP  146 (181)
T ss_dssp             EECSCGGGGTTCGGGBCC
T ss_pred             EEcCChhhhhcCccCeeE
Confidence            999999766543344543

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=94.85  E-value=0.0049  Score=42.12  Aligned_cols=19  Identities=42%  Similarity=0.662  Sum_probs=16.2

Q ss_pred             cCCcceEEEeCCCccccCh
Q 025896           19 LAPLEAVLFDVDGTLCDSD   37 (246)
Q Consensus        19 ~~~~k~iifD~DGTL~~~~   37 (246)
                      +..+|+++||+||||+|..
T Consensus         2 ~~~ik~~i~DvDGVlTDG~   20 (177)
T d1k1ea_           2 LENIKFVITDVDGVLTDGQ   20 (177)
T ss_dssp             GGGCCEEEEECTTTTSCSE
T ss_pred             cccCeEEEEccCCcccCCe
Confidence            4578999999999999854

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=93.21  E-value=0.032  Score=42.91  Aligned_cols=21  Identities=29%  Similarity=0.600  Sum_probs=17.8

Q ss_pred             cceEEEeCCCccccChhhHHH
Q 025896           22 LEAVLFDVDGTLCDSDPLHHY   42 (246)
Q Consensus        22 ~k~iifD~DGTL~~~~~~~~~   42 (246)
                      +|.|+||+||||++....+..
T Consensus         1 ~~~i~fd~dGVll~~~~~~D~   21 (380)
T d1qyia_           1 MKKILFDVDGVFLSEERCFDV   21 (380)
T ss_dssp             CCEEEECSBTTTBCSHHHHHH
T ss_pred             CceEEEeCCcEEEcceeecch
Confidence            589999999999998876654

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=93.16  E-value=0.069  Score=38.14  Aligned_cols=48  Identities=21%  Similarity=0.219  Sum_probs=35.6

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHhcCCCCcceEEE
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAP---RENAELMISKLGLSDFFQVVI  155 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~---~~~~~~~l~~~~l~~~f~~~~  155 (246)
                      .++|++.++++.|+++|++++++||++   +..+...+..+|+.-..+.++
T Consensus        19 ~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~~~~i~   69 (250)
T d2c4na1          19 VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFY   69 (250)
T ss_dssp             EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCGGGEE
T ss_pred             CcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccccceeEe
Confidence            345789999999999999999999865   455666677788753333343

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=92.84  E-value=0.091  Score=38.04  Aligned_cols=42  Identities=10%  Similarity=0.127  Sum_probs=37.2

Q ss_pred             CCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          108 KPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       108 ~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      .+.+.+.+.|++|+++|++++++|+++...+...++.+++..
T Consensus        18 ~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~   59 (285)
T d1nrwa_          18 QVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT   59 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCc
Confidence            345778899999999999999999999999999999998764

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=92.06  E-value=0.13  Score=36.85  Aligned_cols=49  Identities=10%  Similarity=0.110  Sum_probs=37.2

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHhcCCCCcceEEEec
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAP---RENAELMISKLGLSDFFQVVILG  157 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~  157 (246)
                      +.|++.++|++|+++|.+++++||+.   .......+..+|+.-..+.++++
T Consensus        24 ~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~~~~v~ts   75 (261)
T d1vjra_          24 LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTS   75 (261)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEH
T ss_pred             cCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccccccceeccH
Confidence            45789999999999999999999864   34566667778876445656553

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.77  E-value=0.27  Score=34.86  Aligned_cols=26  Identities=19%  Similarity=0.229  Sum_probs=22.8

Q ss_pred             cccHHHHHHHHHHcCCeEEEEeCCCH
Q 025896          110 ISGLDKVKKWIEDRGLKRAAVTNAPR  135 (246)
Q Consensus       110 ~~~~~~~l~~l~~~g~~i~i~s~~~~  135 (246)
                      .|++.++|++|++.|++++++||++.
T Consensus        20 i~~a~~~i~~l~~~g~~~~~~Tn~s~   45 (253)
T d1yv9a1          20 IPAGKRFVERLQEKDLPFLFVTNNTT   45 (253)
T ss_dssp             CHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             CccHHHHHHHHHHCCCCEEEEeCCCC
Confidence            47888999999999999999998653

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=89.23  E-value=0.36  Score=33.39  Aligned_cols=43  Identities=12%  Similarity=0.014  Sum_probs=36.1

Q ss_pred             CCCcccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCCCC
Q 025896          107 LKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSD  149 (246)
Q Consensus       107 ~~~~~~~~~~l~~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~  149 (246)
                      ..+.+++.+.|++|++.|++++++|+++..........+++..
T Consensus        19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~   61 (225)
T d1l6ra_          19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING   61 (225)
T ss_dssp             SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc
Confidence            4455778899999999999999999999888888888877764

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=85.31  E-value=0.22  Score=35.45  Aligned_cols=48  Identities=19%  Similarity=0.263  Sum_probs=33.1

Q ss_pred             CcccHHHHHHHHHHcCCeEEEEeCCCH---HHHHHHHH-hcCCCCcceEEEe
Q 025896          109 PISGLDKVKKWIEDRGLKRAAVTNAPR---ENAELMIS-KLGLSDFFQVVIL  156 (246)
Q Consensus       109 ~~~~~~~~l~~l~~~g~~i~i~s~~~~---~~~~~~l~-~~~l~~~f~~~~~  156 (246)
                      +.|++.++++.|++.|++++++||+..   ..+...+. .+++....+.+++
T Consensus        19 ~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~~~~i~~   70 (253)
T d1wvia_          19 RIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPLETIYT   70 (253)
T ss_dssp             ECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCCGGGEEE
T ss_pred             cCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCcccccccccc
Confidence            458899999999999999999998643   33444443 3455544444544

>d2nn4a1 a.272.1.1 (A:1-62) Hypothetical protein YqgQ {Bacillus subtilis [TaxId: 1423]}

class: All alpha proteins
fold: YqgQ-like
superfamily: YqgQ-like
family: YqgQ-like
domain: Hypothetical protein YqgQ
species: Bacillus subtilis [TaxId: 1423]

Probab=85.08  E-value=0.11  Score=27.85  Aligned_cols=25  Identities=16%  Similarity=0.077  Sum_probs=21.5

Q ss_pred             HHHHHHHcCCCCCcEEEEecChhhhHHHH
Q 025896          170 YFKALEMLKVSKDHTFVFEDSVSGIKAGV  198 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~igD~~~Di~~a~  198 (246)
                      .+++++++|+    .+++||...|+++..
T Consensus         7 VqQLLK~fG~----~IY~GdR~~DielM~   31 (62)
T d2nn4a1           7 VQQLLKTFGH----IVYFGDRELEIEFML   31 (62)
T ss_dssp             HHHHHHTTTC----CCCCSCHHHHHHHHH
T ss_pred             HHHHHHHCCE----eEEeCchHHHHHHHH
Confidence            4688999998    899999999998754

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=84.94  E-value=0.75  Score=34.83  Aligned_cols=94  Identities=14%  Similarity=0.191  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHc-CCeE-EEEeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHHc-----CCCCCcEE
Q 025896          113 LDKVKKWIEDR-GLKR-AAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEML-----KVSKDHTF  185 (246)
Q Consensus       113 ~~~~l~~l~~~-g~~i-~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~-----~~~~~~~~  185 (246)
                      +.++++.|+++ ++.+ .|+|+.........++.+++..-++.-+..+.    ......+-.++..+     ...|+=++
T Consensus        18 l~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~kpD~v~   93 (377)
T d1o6ca_          18 MAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKER----QTLAEITSNALVRLDELFKDIKPDIVL   93 (377)
T ss_dssp             HHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCCCSEECCCCCTT----CCHHHHHHHHHHHHHHHHHHHCCSEEE
T ss_pred             HHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhhcCCCCceeeecCCCC----CCHHHHHHHHHHhhhhhhhhcccceeE
Confidence            45788888775 4454 45677665666777788887643432221111    11112222222221     24678899


Q ss_pred             EEecChhhh---HHHHhcCCCEEEEcCC
Q 025896          186 VFEDSVSGI---KAGVAAGLPVVGLTTR  210 (246)
Q Consensus       186 ~igD~~~Di---~~a~~~G~~~i~v~~~  210 (246)
                      +.||+..-+   .+|...|++.+++..|
T Consensus        94 v~GDr~e~la~a~aa~~~~Ipi~HiegG  121 (377)
T d1o6ca_          94 VHGDTTTTFAGSLAAFYHQIAVGHVEAG  121 (377)
T ss_dssp             EETTCHHHHHHHHHHHHTTCEEEEESCC
T ss_pred             eeecccccchhhhhhhhccceEEEEecc
Confidence            999999655   5566679999999887

>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: ThiG-like
family: ThiG-like
domain: Thiazole biosynthesis protein ThiG
species: Bacillus subtilis [TaxId: 1423]

Probab=84.81  E-value=4.7  Score=28.06  Aligned_cols=96  Identities=15%  Similarity=0.077  Sum_probs=68.0

Q ss_pred             CCcccHHHHHH---HHHHcCCeEEEEeCCCHHHHHHHHHhcCCCCcceEEEecCC-CCCCCCChHHHHHHHHHcCCCCCc
Q 025896          108 KPISGLDKVKK---WIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDE-CERAKPFPDPYFKALEMLKVSKDH  183 (246)
Q Consensus       108 ~~~~~~~~~l~---~l~~~g~~i~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~-~~~~kp~~~~~~~~~~~~~~~~~~  183 (246)
                      .++|+..++++   .|-+.|+.+..+++.+....++ |+..|-.....  ..+.. .+.+..++..++.++++..++   
T Consensus       106 ~L~PD~~etl~Aae~Lv~eGF~VlpY~~~D~v~ak~-Le~~Gc~avMP--lgsPIGSg~Gl~n~~~l~~i~~~~~vP---  179 (251)
T d1xm3a_         106 SLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARK-LEELGVHAIMP--GASPIGSGQGILNPLNLSFIIEQAKVP---  179 (251)
T ss_dssp             TCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHH-HHHHTCSCBEE--CSSSTTCCCCCSCHHHHHHHHHHCSSC---
T ss_pred             CcCCCHHHHHHHHHHHHhCCcEEEEecCCCHHHHHH-HHHcCChhHHH--hhhhhhcCCCcCChHHHHHHHhcCCcc---
Confidence            46788777764   5777899999999998766655 44455443222  22222 256777899999999987663   


Q ss_pred             EEEEecCh---hhhHHHHhcCCCEEEEcCC
Q 025896          184 TFVFEDSV---SGIKAGVAAGLPVVGLTTR  210 (246)
Q Consensus       184 ~~~igD~~---~Di~~a~~~G~~~i~v~~~  210 (246)
                       +.|+-+.   +|...|.+.|+..+++++.
T Consensus       180 -vIvDAGIG~pSdAa~AMElG~daVLvNTA  208 (251)
T d1xm3a_         180 -VIVDAGIGSPKDAAYAMELGADGVLLNTA  208 (251)
T ss_dssp             -BEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred             -EEEecCCCCHHHHHHHHHccCCEEEechh
Confidence             4554443   8999999999999999643

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=83.65  E-value=1.3  Score=33.37  Aligned_cols=94  Identities=14%  Similarity=0.203  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHc-CCeEEE-EeCCCHHHHHHHHHhcCCCCcceEEEecCCCCCCCCChHHHHHHHHH----c-CCCCCcEE
Q 025896          113 LDKVKKWIEDR-GLKRAA-VTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEM----L-KVSKDHTF  185 (246)
Q Consensus       113 ~~~~l~~l~~~-g~~i~i-~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~----~-~~~~~~~~  185 (246)
                      +.++++.|++. ++.+.+ +|+.........++.+++..-++.-+...    ..........++..    + ..+|+=++
T Consensus        16 l~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~kPD~v~   91 (376)
T d1f6da_          16 MAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQP----GQGLTEITCRILEGLKPILAEFKPDVVL   91 (376)
T ss_dssp             HHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECCCCSS----SSCHHHHHHHHHHHHHHHHHHHCCSEEE
T ss_pred             HHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhcCCCCCcccccCCC----CCCHHHHHHHHHHhhHHHHHhccCccee
Confidence            45788888776 466555 56666555666777777653332211111    11111222222222    1 25688899


Q ss_pred             EEecChhhhHH---HHhcCCCEEEEcCC
Q 025896          186 VFEDSVSGIKA---GVAAGLPVVGLTTR  210 (246)
Q Consensus       186 ~igD~~~Di~~---a~~~G~~~i~v~~~  210 (246)
                      +.||+..=+.+   |...+++.+++..|
T Consensus        92 v~GDr~e~la~a~aa~~~~ipi~HiegG  119 (376)
T d1f6da_          92 VHGDTTTTLATSLAAFYQRIPVGHVEAG  119 (376)
T ss_dssp             EETTCHHHHHHHHHHHTTTCCEEEESCC
T ss_pred             eeccccchhhHHHHHHhhCceEEEEecc
Confidence            99999976654   44569999999887

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.56  E-value=0.21  Score=33.71  Aligned_cols=17  Identities=35%  Similarity=0.417  Sum_probs=14.1

Q ss_pred             CcceEEEeCCCccccCh
Q 025896           21 PLEAVLFDVDGTLCDSD   37 (246)
Q Consensus        21 ~~k~iifD~DGTL~~~~   37 (246)
                      .-+++++|+|+||+.+.
T Consensus        14 ~k~~LVLDLDeTLihs~   30 (181)
T d1ta0a_          14 DKICVVIDLDETLVHSS   30 (181)
T ss_dssp             TSCEEEECCBTTTEEEE
T ss_pred             CCeEEEEeCCCCEEccc
Confidence            44689999999999864