Citrus Sinensis ID: 025906

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240------
MRANKAMEKQQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGISRSRDHPSVVEV
ccccHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccc
ccccccccccccccccccccccHHHHcHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEccccccccccEEHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHEEEEcccccccEEccccccccccccccEEc
MRANKAMEkqqnslplhvshvkksslIINRSLVLLHFTSLAFLVYYRVSYFFQvsnaraaplLPWLLVFAAELLLSFQWLLGIayrwrpisrtvfperlpeadqlpgidvfictadptkeptVEVMNTVLSAmaldyppeklhvylsddggasITLLGMREAWKFARSwlpfckrfgikticpeayfsdpengdgdsgnaEFIVEREKIKEKYTEFKERVTRAIEKWglenegisrsrdhpsvvev
mrankamekqqnslplhvSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFsdpengdgdsgnaEFIVEREKIKEKYTEFKERVTRaiekwglenegisrsrdhpsvvev
MRANKAMEKQQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGISRSRDHPSVVEV
*******************HVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS*************FIVEREKIKEKYTEFKERVTRAIEKWGL*****************
******************SHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDP**********EFIVEREKIKEKYTEFKERVTRAIEKWG*********RDHPSVVEV
************SLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEG*************
*********QQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENE**SR*******VE*
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MRANKAMEKQQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVExxxxxxxxxxxxxxxxxxxxxWGLENEGISRSRDHPSVVEV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query246 2.2.26 [Sep-21-2011]
Q0DXZ1 745 Cellulose synthase-like p no no 0.707 0.233 0.393 2e-35
Q651X6 728 Cellulose synthase-like p no no 0.813 0.274 0.382 3e-35
Q570S7 760 Cellulose synthase-like p yes no 0.882 0.285 0.336 2e-34
Q9SKJ5 1065 Probable cellulose syntha no no 0.918 0.212 0.351 3e-34
Q651X7 737 Cellulose synthase-like p no no 0.719 0.240 0.422 4e-34
Q8VYR4 722 Cellulose synthase-like p no no 0.918 0.313 0.346 4e-34
Q0WVN5 751 Cellulose synthase-like p no no 0.882 0.288 0.340 4e-34
O48946 1081 Cellulose synthase A cata no no 0.922 0.209 0.349 1e-33
Q84M43 1073 Probable cellulose syntha no no 0.894 0.205 0.353 6e-33
A2XN66 1073 Probable cellulose syntha N/A no 0.894 0.205 0.353 6e-33
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function desciption
 Score =  149 bits (376), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 118/201 (58%), Gaps = 27/201 (13%)

Query: 65  WLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEA---DQLPGIDVFICTADPTKEP 121
           WL + AAEL   F W+L ++ RW P+ R  F +RL ++   D+LP +D+F+CTADPT EP
Sbjct: 68  WLGMLAAELWFGFYWVLTLSVRWCPVYRRTFKDRLAQSYSEDELPSVDIFVCTADPTAEP 127

Query: 122 TVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTI 181
            + V++TVLS MA DY PEKL++YLSDD G+ +T   + EA +FA+ W+PFCK++ ++  
Sbjct: 128 PMLVISTVLSVMAYDYLPEKLNIYLSDDAGSVLTFYVLCEASEFAKHWIPFCKKYKVEPR 187

Query: 182 CPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERV----------------TRAIE 225
            P AYF+   +     G  E+      +KE Y +  +RV                +R   
Sbjct: 188 SPAAYFAKVASPPDGCGPKEWFT----MKELYKDMTDRVNSVVNSGRIPEVPRCHSRGFS 243

Query: 226 KWGLENEGISRSRDHPSVVEV 246
           +W   NE  + S DHPS+V++
Sbjct: 244 QW---NENFT-SSDHPSIVQI 260
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function description
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SKJ5|CESAA_ARATH Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1 Back     alignment and function description
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function description
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|O48946|CESA1_ARATH Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1 Back     alignment and function description
>sp|Q84M43|CESA2_ORYSJ Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1 Back     alignment and function description
>sp|A2XN66|CESA2_ORYSI Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query246
359477703 733 PREDICTED: cellulose synthase-like prote 0.955 0.320 0.631 6e-82
297737188 822 unnamed protein product [Vitis vinifera] 0.971 0.290 0.595 5e-81
147785659 643 hypothetical protein VITISV_002996 [Viti 0.959 0.367 0.598 1e-80
359477392 678 PREDICTED: cellulose synthase-like prote 0.959 0.348 0.598 2e-80
224111028 857 predicted protein [Populus trichocarpa] 0.975 0.280 0.609 3e-80
359477617 550 PREDICTED: cellulose synthase A catalyti 0.959 0.429 0.602 6e-80
356535446 740 PREDICTED: cellulose synthase-like prote 0.955 0.317 0.596 2e-79
255576870 762 cellulose synthase, putative [Ricinus co 0.947 0.305 0.618 6e-79
255576874 570 transferase, putative [Ricinus communis] 0.959 0.414 0.574 1e-75
356548660 736 PREDICTED: cellulose synthase-like prote 0.922 0.308 0.594 8e-73
>gi|359477703|ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  309 bits (792), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 151/239 (63%), Positives = 182/239 (76%), Gaps = 4/239 (1%)

Query: 10  QQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARA-APLLPWLLV 68
             +SLPL + +V+KS+ IINR   L+H T+L  LVYYR S+ FQ    RA  P  PWLLV
Sbjct: 1   MDSSLPLQLCYVRKSTAIINRWYTLIHSTALMALVYYRASFLFQNPENRAHTPTSPWLLV 60

Query: 69  FAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLPGIDVFICTADPTKEPTVEVMNT 128
           FA EL+LSF WLLG AYRWRP++RT+FPERLPE   LP IDVFICTADP +EPT  VMNT
Sbjct: 61  FAGELILSFIWLLGQAYRWRPVTRTLFPERLPEDKHLPAIDVFICTADPKREPTFGVMNT 120

Query: 129 VLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS 188
           V+SAMALDYPPE+LHVY+SDDGG+S+TL GM+EAW FARSWLPFC+  GIKT CPEAYFS
Sbjct: 121 VISAMALDYPPERLHVYVSDDGGSSLTLYGMKEAWAFARSWLPFCRTHGIKTRCPEAYFS 180

Query: 189 DPENGDG-DSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGISRSRDHPSVVEV 246
             EN +G D    EF  ER+KIK+++  F+ERV RA E  G+ ++ I  S DHPS++EV
Sbjct: 181 SAENDEGADLRGTEFFEERKKIKKEFELFRERVMRATENGGIGDKSI--SGDHPSIIEV 237

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297737188|emb|CBI26389.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147785659|emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477392|ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224111028|ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359477617|ref|XP_002280659.2| PREDICTED: cellulose synthase A catalytic subunit 4 [UDP-forming]-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|356535446|ref|XP_003536256.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|255576870|ref|XP_002529321.1| cellulose synthase, putative [Ricinus communis] gi|223531245|gb|EEF33090.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255576874|ref|XP_002529323.1| transferase, putative [Ricinus communis] gi|223531247|gb|EEF33092.1| transferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356548660|ref|XP_003542718.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query246
TAIR|locus:2138116 722 CSLG2 "AT4G24000" [Arabidopsis 0.873 0.297 0.372 4.1e-34
TAIR|locus:2138106 751 CSLG3 "AT4G23990" [Arabidopsis 0.837 0.274 0.375 2.1e-33
TAIR|locus:2127776 1081 CESA1 "cellulose synthase 1" [ 0.918 0.209 0.351 7.9e-33
TAIR|locus:2040080 1065 CESA10 "cellulose synthase 10" 0.918 0.212 0.351 9.9e-33
TAIR|locus:2138126 760 CSLG1 "AT4G24010" [Arabidopsis 0.837 0.271 0.361 4.3e-32
TAIR|locus:2012050 729 CSLE1 "AT1G55850" [Arabidopsis 0.715 0.241 0.394 1.7e-31
UNIPROTKB|Q2QNS6 1215 CSLD4 "Cellulose synthase-like 0.788 0.159 0.386 3.1e-31
TAIR|locus:2060211 755 CSLB04 "AT2G32540" [Arabidopsi 0.926 0.301 0.333 8.3e-31
TAIR|locus:2156789 1065 CEV1 "CONSTITUTIVE EXPRESSION 0.959 0.221 0.320 1.1e-30
TAIR|locus:2060216 757 CSLB02 "AT2G32620" [Arabidopsi 0.906 0.294 0.351 1.8e-30
TAIR|locus:2138116 CSLG2 "AT4G24000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 378 (138.1 bits), Expect = 4.1e-34, P = 4.1e-34
 Identities = 86/231 (37%), Positives = 126/231 (54%)

Query:     7 MEKQQ-NSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPW 65
             ME Q+ +S  LH  H  + + I  R   + H   +  L+Y+ V      +N     L+  
Sbjct:     1 MEPQRKHSTALHTCHPCRRT-IPYRIYAVFHTCGIIALMYHHVHSIVNANNT----LITC 55

Query:    66 LLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLP-EADQLPGIDVFICTADPTKEPTVE 124
             LL+ + +++L+F W    + R  PI RT +PE+   + +  P +DVFICTADP KEP + 
Sbjct:    56 LLLLS-DIVLAFMWATTTSLRLNPIHRTEYPEKYAAKPEDFPKLDVFICTADPYKEPPMM 114

Query:   125 VMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPE 184
             V+NT LS MA +YP  K+ VY+SDDGG+S+TL  + EA KF++ WLPFCK   ++   PE
Sbjct:   115 VVNTALSVMAYEYPSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPE 174

Query:   185 AYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGIS 235
              YFS   +   D        E E +K  Y + K RV   +E   +E   I+
Sbjct:   175 VYFSSKSHSSSD--------EAENLKMMYEDMKSRVEHVVESGKVETAFIA 217
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016740 "transferase activity" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
TAIR|locus:2138106 CSLG3 "AT4G23990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138126 CSLG1 "AT4G24010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012050 CSLE1 "AT1G55850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q2QNS6 CSLD4 "Cellulose synthase-like protein D4" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2060211 CSLB04 "AT2G32540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060216 CSLB02 "AT2G32620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query246
PLN02893 734 PLN02893, PLN02893, Cellulose synthase-like protei 2e-52
PLN02400 1085 PLN02400, PLN02400, cellulose synthase 2e-43
PLN02248 1135 PLN02248, PLN02248, cellulose synthase-like protei 9e-42
PLN02638 1079 PLN02638, PLN02638, cellulose synthase A (UDP-form 3e-40
PLN02195 977 PLN02195, PLN02195, cellulose synthase A 3e-39
PLN02189 1040 PLN02189, PLN02189, cellulose synthase 1e-38
PLN02436 1094 PLN02436, PLN02436, cellulose synthase A 1e-38
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 1e-38
PLN02190 756 PLN02190, PLN02190, cellulose synthase-like protei 2e-37
pfam03552 716 pfam03552, Cellulose_synt, Cellulose synthase 2e-34
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 1e-14
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 1e-08
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 9e-07
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  180 bits (458), Expect = 2e-52
 Identities = 100/253 (39%), Positives = 137/253 (54%), Gaps = 34/253 (13%)

Query: 13  SLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAE 72
           + PLH  H  + + I NR   +++  ++  L+Y+ V      +       L  LL+  A+
Sbjct: 11  APPLHTCHPMRRT-IANRVFAVVYSCAILALLYHHVIALLHSTT-----TLITLLLLLAD 64

Query: 73  LLLSFQWLLGIAYRWRPISRTVFPERL----PEADQLPGIDVFICTADPTKEPTVEVMNT 128
           ++L+F W    A+R  P+ R VF E L     E+D  PG+DVFICTADP KEP + V+NT
Sbjct: 65  IVLAFMWATTQAFRMCPVHRRVFIEHLEHYAKESD-YPGLDVFICTADPYKEPPMGVVNT 123

Query: 129 VLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTICPEAYFS 188
            LS MA DYP EKL VY+SDDGG+ +TL    EA KFA  WLPFCK+  I   CPEAYFS
Sbjct: 124 ALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYFS 183

Query: 189 DPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEKWGLENEGI---------SR--- 236
                   S +  +  E E+IK  Y   K RV   +E+  +  + I         SR   
Sbjct: 184 --------SNSHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTD 235

Query: 237 ---SRDHPSVVEV 246
               +DHP+V++V
Sbjct: 236 KFTRQDHPTVIQV 248

Length = 734
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 246
PLN02190 756 cellulose synthase-like protein 100.0
PLN02195 977 cellulose synthase A 100.0
PLN02915 1044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN02400 1085 cellulose synthase 100.0
PLN02189 1040 cellulose synthase 100.0
PLN02436 1094 cellulose synthase A 100.0
PLN02638 1079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN02893 734 Cellulose synthase-like protein 100.0
PLN02248 1135 cellulose synthase-like protein 100.0
PF03552 720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 99.96
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 99.96
PRK05454 691 glucosyltransferase MdoH; Provisional 99.72
COG1215 439 Glycosyltransferases, probably involved in cell wa 99.52
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 99.52
PRK14583 444 hmsR N-glycosyltransferase; Provisional 99.42
cd04191 254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 99.37
PRK11204 420 N-glycosyltransferase; Provisional 99.36
cd06421 234 CESA_CelA_like CESA_CelA_like are involved in the 99.29
TIGR03472 373 HpnI hopanoid biosynthesis associated glycosyl tra 99.23
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.21
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.1
TIGR03469 384 HonB hopene-associated glycosyltransferase HpnB. T 99.05
cd06435 236 CESA_NdvC_like NdvC_like proteins in this family a 98.98
cd06427 241 CESA_like_2 CESA_like_2 is a member of the cellulo 98.96
PRK14716 504 bacteriophage N4 adsorption protein B; Provisional 98.95
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 98.88
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 98.83
cd06438183 EpsO_like EpsO protein participates in the methano 98.79
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 98.77
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 98.67
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 98.67
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 98.66
PTZ00260 333 dolichyl-phosphate beta-glucosyltransferase; Provi 98.64
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 98.63
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 98.61
cd04190 244 Chitin_synth_C C-terminal domain of Chitin Synthas 98.5
cd02525 249 Succinoglycan_BP_ExoA ExoA is involved in the bios 98.48
PRK10063 248 putative glycosyl transferase; Provisional 98.47
PRK10073 328 putative glycosyl transferase; Provisional 98.45
COG0463 291 WcaA Glycosyltransferases involved in cell wall bi 98.44
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 98.41
cd06434 235 GT2_HAS Hyaluronan synthases catalyze polymerizati 98.41
PLN02726 243 dolichyl-phosphate beta-D-mannosyltransferase 98.38
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 98.38
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 98.36
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 98.33
PRK10018 279 putative glycosyl transferase; Provisional 98.3
PRK13915 306 putative glucosyl-3-phosphoglycerate synthase; Pro 98.25
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 98.24
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 98.24
cd04188211 DPG_synthase DPG_synthase is involved in protein N 98.21
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 98.16
cd06423180 CESA_like CESA_like is the cellulose synthase supe 98.14
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 98.13
cd06442 224 DPM1_like DPM1_like represents putative enzymes si 98.1
cd02510 299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 98.09
cd02511 229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 98.08
cd02522 221 GT_2_like_a GT_2_like_a represents a glycosyltrans 97.97
PRK10714 325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 97.97
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 97.93
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 97.86
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 97.52
cd02526 237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 97.37
COG1216 305 Predicted glycosyltransferases [General function p 96.49
KOG2977 323 consensus Glycosyltransferase [General function pr 96.42
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 95.96
PF03142 527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 95.79
cd02514 334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 95.79
PF10111 281 Glyco_tranf_2_2: Glycosyltransferase like family 2 95.25
PLN02893 734 Cellulose synthase-like protein 94.64
TIGR01556 281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 93.77
KOG3738 559 consensus Predicted polypeptide N-acetylgalactosam 93.63
PLN02189 1040 cellulose synthase 92.62
PF1370497 Glyco_tranf_2_4: Glycosyl transferase family 2 91.86
PLN02195 977 cellulose synthase A 88.19
KOG3736 578 consensus Polypeptide N-acetylgalactosaminyltransf 86.17
PLN02638 1079 cellulose synthase A (UDP-forming), catalytic subu 85.08
>PLN02190 cellulose synthase-like protein Back     alignment and domain information 
Probab=100.00  E-value=1.3e-54  Score=431.07  Aligned_cols=228  Identities=34%  Similarity=0.624  Sum_probs=201.7

Q ss_pred             HHhcCCCCCceeeeecccchhHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 025906            7 MEKQQNSLPLHVSHVKKSSLIINRSLVLLHFTSLAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYR   86 (246)
Q Consensus         7 ~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~l~~~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~   86 (246)
                      |++..+.+|||++++.+.+  ++|++.++++++++.|+.||+++.++.       .+.|+++++||+|++++|+|+++.+
T Consensus         2 ~~~~~~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~-------~~~W~~~~~~E~wf~~~WlL~q~~k   72 (756)
T PLN02190          2 ADSSSSLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN-------DTVWLVAFLCESCFSFVWLLITCIK   72 (756)
T ss_pred             CcccCCCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc-------cHHHHHHHHHHHHHHHHHHHhccce
Confidence            3456688999999997655  599999999999999999999987653       2478889999999999999999999


Q ss_pred             hcccCCCCCCCCCCc-CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHH
Q 025906           87 WRPISRTVFPERLPE-ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKF  165 (246)
Q Consensus        87 ~~p~~r~~~~~~l~~-~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~  165 (246)
                      |+|++|.++|+++.+ -+++|+|||||||+||.+|||.++.+|+++++++|||++|+.|||+|||+++.|++++.||++|
T Consensus        73 w~pv~r~~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~F  152 (756)
T PLN02190         73 WSPAEYKPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKF  152 (756)
T ss_pred             eeecCCCCCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHH
Confidence            999999999988865 2469999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhchHHHHHHcCCCcCCCccceeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhhcc-------CCCCCCCCCCCC
Q 025906          166 ARSWLPFCKRFGIKTICPEAYFSDPENGDGDSGNAEFIVEREKIKEKYTEFKERVTRAIEK-------WGLENEGISRSR  238 (246)
Q Consensus       166 a~~w~~lc~~~gv~~r~p~~Y~~r~~~~~aKaGnln~a~~~~~~~~~y~~f~~ri~~~~~~-------~~~~~~~~~~~~  238 (246)
                      |+.|+|||+|+||+||+||+||+.+...  + ...+|..||++||++||||++||+++...       +..+.+.+++++
T Consensus       153 A~~WvPFCrK~~IepRaPe~YF~~~~~~--~-~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~  229 (756)
T PLN02190        153 AKIWVPFCKKYNVRVRAPFRYFLNPPVA--T-EDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPN  229 (756)
T ss_pred             HhhhcccccccCCCcCCHHHHhcCCCCC--C-CCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCC
Confidence            9999999999999999999999985321  1 22589999999999999999999987421       222334568999


Q ss_pred             CCCCcccC
Q 025906          239 DHPSVVEV  246 (246)
Q Consensus       239 ~h~~iv~v  246 (246)
                      |||+||||
T Consensus       230 dH~~iiqV  237 (756)
T PLN02190        230 DHSTIVKV  237 (756)
T ss_pred             CCccceEE
Confidence            99999997

>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query246
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 99.89
1qg8_A 255 Protein (spore coat polysaccharide biosynthesis P 98.76
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 98.74
3bcv_A 240 Putative glycosyltransferase protein; protein stru 98.73
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 98.7
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 98.51
3ckj_A 329 Putative uncharacterized protein; mycobacteria, un 98.49
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 98.42
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 98.34
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 98.2
3f1y_A 387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 98.15
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 97.52
2bo4_A 397 Mannosylglycerate synthase; catalysis, glycosyltra 97.16
2wvl_A 391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 96.62
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 96.46
2zu9_A 394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 96.28
1fo8_A 343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 95.87
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 95.74
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=99.89  E-value=7.4e-23  Score=206.66  Aligned_cols=185  Identities=23%  Similarity=0.309  Sum_probs=151.7

Q ss_pred             HHHHHHHHHHHH-HHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCcCCCCC
Q 025906           28 INRSLVLLHFTS-LAFLVYYRVSYFFQVSNARAAPLLPWLLVFAAELLLSFQWLLGIAYRWRPISRTVFPERLPEADQLP  106 (246)
Q Consensus        28 ~~R~~~~~~l~~-~~~Yl~wR~~~tl~~~~~~~~~~~~wi~l~~aE~~~~~~~lL~~~~~~~p~~r~~~~~~l~~~~~~P  106 (246)
                      +.|++.+++.++ .++|++||++.|++.. ..+.+.+++++++++|+++.+.+++..+..+++..|.+.++.  .+++.|
T Consensus        64 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~-~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P  140 (802)
T 4hg6_A           64 VPRFLLLSAASMLVMRYWFWRLFETLPPP-ALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELP  140 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSCCC-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhheecCCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCC
Confidence            445555544444 5789999999999763 235778899999999999999999999999998888765432  246789


Q ss_pred             ceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHH-----HHHHHHHHhhchHHHHHHcCCCcC
Q 025906          107 GIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLL-----GMREAWKFARSWLPFCKRFGIKTI  181 (246)
Q Consensus       107 ~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~-----~~~ea~~~a~~w~~lc~~~gv~~r  181 (246)
                      +|+|+|||||   |+++++++|+.++++++||.++++|+|+||||+|.|.+     .+.+.++.......+|+++++.  
T Consensus       141 ~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~--  215 (802)
T 4hg6_A          141 TVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVV--  215 (802)
T ss_dssp             CEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCE--
T ss_pred             cEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcE--
Confidence            9999999999   99889999999999999999899999999999999953     3444444445566899999999  


Q ss_pred             CCccceeCCCCCCCCCCchhhHHHH---------HHHHHHHHHHHHHHHHhh
Q 025906          182 CPEAYFSDPENGDGDSGNAEFIVER---------EKIKEKYTEFKERVTRAI  224 (246)
Q Consensus       182 ~p~~Y~~r~~~~~aKaGnln~a~~~---------~~~~~~y~~f~~ri~~~~  224 (246)
                          |+.+++|.+.|+||+|.+++.         |+|-....+++.+..+.+
T Consensus       216 ----~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~  263 (802)
T 4hg6_A          216 ----YSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYF  263 (802)
T ss_dssp             ----EEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHH
T ss_pred             ----EEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHH
Confidence                999999989999999999976         666666777777777665
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query246
d1xhba2 328 Polypeptide N-acetylgalactosaminyltransferase 1, N 98.91
d1qg8a_ 255 Spore coat polysaccharide biosynthesis protein Sps 98.76
d1omza_ 265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 98.42
d2bo4a1 381 Mannosylglycerate synthase, MGS {Rhodothermus mari 95.36
d1fo8a_ 343 N-acetylglucosaminyltransferase I {Rabbit (Oryctol 84.52
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.91  E-value=9.5e-10  Score=95.61  Aligned_cols=88  Identities=18%  Similarity=0.116  Sum_probs=65.6

Q ss_pred             CCCCCceeEEEeccCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEEcCCCCcccHHHHHHHHHHhhchHHHHHHcCCCcC
Q 025906          102 ADQLPGIDVFICTADPTKEPTVEVMNTVLSAMALDYPPEKLHVYLSDDGGASITLLGMREAWKFARSWLPFCKRFGIKTI  181 (246)
Q Consensus       102 ~~~~P~Vdv~V~tyNp~~E~~~vv~~Tl~~~~~ldYP~~kl~vyvlDDG~~d~t~~~~~ea~~~a~~w~~lc~~~gv~~r  181 (246)
                      ++.+|+|+|+||+||   |....+.+||.++++..||....+|+|+||||+|.|.....+         .+.+++..   
T Consensus        18 ~~~~P~vSIIIp~yN---e~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~---------~~~~~~~~---   82 (328)
T d1xhba2          18 PDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLE---------SYVKKLKV---   82 (328)
T ss_dssp             CSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHH---------HHHHSSSS---
T ss_pred             CCCCCCEEEEEeccC---CcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHH---------HHHHhcCC---
Confidence            467899999999999   887889999999999999965569999999999987654333         33344432   


Q ss_pred             CCccceeCCCCCCCCCCchhhHHHH
Q 025906          182 CPEAYFSDPENGDGDSGNAEFIVER  206 (246)
Q Consensus       182 ~p~~Y~~r~~~~~aKaGnln~a~~~  206 (246)
                       +..++..+.|.| .++..|.+...
T Consensus        83 -~i~vi~~~~n~G-~~~a~N~Gi~~  105 (328)
T d1xhba2          83 -PVHVIRMEQRSG-LIRARLKGAAV  105 (328)
T ss_dssp             -CEEEEECSSCCC-HHHHHHHHHHH
T ss_pred             -CeEEEEeccccc-chHHHHHHHHh
Confidence             233777666644 35567887765
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure