Citrus Sinensis ID: 025978


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYFD
ccHHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHEEcHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHcccHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
ccHHHHHHHHccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
MGTVVTIAREEGLWALWNGVIAGLHRQCIYgglriglydpvktflvgsdfvgdiPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAegklpsgvprryygalDAYCTIVRQEGLGalwtglgpniaRNAIVNAAELASYDQVKETIlkipgftdnIFTHILAGLGAGLFAVCIGSpidvvksrmmgdsaykNTVDCFIKTLKYEGFLAFYKgflpnfsrlgswNVIMFLTLEQAKKVFIREVYFD
MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQaegklpsgvprryYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYFD
MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYFD
***VVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYF*
*GTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLV****VGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEG*******RRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYF*
MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYFD
MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIRE****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
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iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIREVYFD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query245 2.2.26 [Sep-21-2011]
Q9ZWG1305 Mitochondrial uncoupling yes no 0.934 0.750 0.820 1e-119
O81845306 Mitochondrial uncoupling no no 0.983 0.787 0.781 1e-110
O97562309 Mitochondrial uncoupling yes no 0.955 0.757 0.483 7e-60
Q9N2I9311 Mitochondrial uncoupling yes no 0.967 0.762 0.471 9e-60
P70406309 Mitochondrial uncoupling yes no 0.955 0.757 0.475 2e-59
P56499308 Mitochondrial uncoupling yes no 0.967 0.769 0.467 3e-59
O97649308 Mitochondrial uncoupling no no 0.967 0.769 0.463 3e-59
Q3SZI5309 Mitochondrial uncoupling yes no 0.955 0.757 0.471 3e-59
P56501308 Mitochondrial uncoupling no no 0.967 0.769 0.467 4e-59
P56500309 Mitochondrial uncoupling no no 0.955 0.757 0.471 5e-59
>sp|Q9ZWG1|PUMP2_ARATH Mitochondrial uncoupling protein 2 OS=Arabidopsis thaliana GN=PUMP2 PE=2 SV=1 Back     alignment and function desciption
 Score =  426 bits (1095), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 201/245 (82%), Positives = 224/245 (91%)

Query: 1   MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 60
           +GT+ TIAREEG+  LW GVIAGLHRQCIYGGLRIGLY+PVKT LVGSDF+GDIPLYQKI
Sbjct: 61  IGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFIGDIPLYQKI 120

Query: 61  FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 120
            AALLTGAIAI+VANPTDLVKVRLQ+EGKLP+GVPRRY GA+DAY TIV+ EG+ ALWTG
Sbjct: 121 LAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEGVSALWTG 180

Query: 121 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 180
           LGPNIARNAIVNAAELASYDQ+KETI+KIP F D++ TH+LAGL AG FAVCIGSPIDVV
Sbjct: 181 LGPNIARNAIVNAAELASYDQIKETIMKIPFFRDSVLTHLLAGLAAGFFAVCIGSPIDVV 240

Query: 181 KSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 240
           KSRMMGDS Y+NTVDCFIKT+K EG +AFYKGFLPNF+RLG+WN IMFLTLEQ KKVF+R
Sbjct: 241 KSRMMGDSTYRNTVDCFIKTMKTEGIMAFYKGFLPNFTRLGTWNAIMFLTLEQVKKVFLR 300

Query: 241 EVYFD 245
           EV +D
Sbjct: 301 EVLYD 305




PUMPS are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation. This leads to a decrease in the efficiency of oxidative phosphorylation and an increase in heat production. May be involved in protecting plant cells against oxidative stress damage.
Arabidopsis thaliana (taxid: 3702)
>sp|O81845|PUMP1_ARATH Mitochondrial uncoupling protein 1 OS=Arabidopsis thaliana GN=PUMP1 PE=1 SV=1 Back     alignment and function description
>sp|O97562|UCP2_PIG Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|Q9N2I9|UCP3_CANFA Mitochondrial uncoupling protein 3 OS=Canis familiaris GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|P70406|UCP2_MOUSE Mitochondrial uncoupling protein 2 OS=Mus musculus GN=Ucp2 PE=1 SV=1 Back     alignment and function description
>sp|P56499|UCP3_RAT Mitochondrial uncoupling protein 3 OS=Rattus norvegicus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|O97649|UCP3_PIG Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|Q3SZI5|UCP2_BOVIN Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|P56501|UCP3_MOUSE Mitochondrial uncoupling protein 3 OS=Mus musculus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|P56500|UCP2_RAT Mitochondrial uncoupling protein 2 OS=Rattus norvegicus GN=Ucp2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query245
224059342305 predicted protein [Populus trichocarpa] 0.951 0.763 0.848 1e-119
297796843305 ATUCP2 [Arabidopsis lyrata subsp. lyrata 0.934 0.750 0.824 1e-118
18424178305 uncoupling protein 2 [Arabidopsis thalia 0.934 0.750 0.820 1e-117
255558838305 mitochondrial uncoupling protein, putati 0.942 0.757 0.832 1e-117
7106157303 uncoupling protein a [Symplocarpus renif 0.922 0.745 0.814 1e-115
269784496304 uncoupling protein a [Symplocarpus renif 0.922 0.743 0.814 1e-115
224138994307 predicted protein [Populus trichocarpa] 0.983 0.785 0.814 1e-114
449450782300 PREDICTED: mitochondrial uncoupling prot 0.914 0.746 0.831 1e-114
269784498304 uncoupling protein [Lysichiton camtschat 0.922 0.743 0.805 1e-113
356496148305 PREDICTED: mitochondrial uncoupling prot 0.983 0.790 0.805 1e-113
>gi|224059342|ref|XP_002299831.1| predicted protein [Populus trichocarpa] gi|222847089|gb|EEE84636.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/245 (84%), Positives = 226/245 (92%)

Query: 1   MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 60
           +GTV TIAREEGL ALW G+ AGLHRQ IYGGLRIGLY+PVK+FLVGSDFVGDIPLYQKI
Sbjct: 61  LGTVATIAREEGLAALWKGITAGLHRQFIYGGLRIGLYEPVKSFLVGSDFVGDIPLYQKI 120

Query: 61  FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 120
            AALLTGA+AIV+ANPTDLVKVRLQAEGKLP+GVP RY GALDAY TIVRQEGLGALWTG
Sbjct: 121 LAALLTGAMAIVIANPTDLVKVRLQAEGKLPAGVPGRYAGALDAYFTIVRQEGLGALWTG 180

Query: 121 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 180
           LGPNIARNAI+NAAELASYD+VK+TIL+IPGFTD+ FTH+LAGLGAG FAVCIGSPIDVV
Sbjct: 181 LGPNIARNAIINAAELASYDEVKQTILQIPGFTDSAFTHVLAGLGAGFFAVCIGSPIDVV 240

Query: 181 KSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 240
           KSRMMGDS+YKNTVDCFIKTLK EG LAFYKGFLPNF RLGSWNV+MFLTLEQ KK+   
Sbjct: 241 KSRMMGDSSYKNTVDCFIKTLKNEGILAFYKGFLPNFGRLGSWNVVMFLTLEQVKKIVTG 300

Query: 241 EVYFD 245
           + Y+D
Sbjct: 301 QAYYD 305




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796843|ref|XP_002866306.1| ATUCP2 [Arabidopsis lyrata subsp. lyrata] gi|297312141|gb|EFH42565.1| ATUCP2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18424178|ref|NP_568894.1| uncoupling protein 2 [Arabidopsis thaliana] gi|75315972|sp|Q9ZWG1.1|PUMP2_ARATH RecName: Full=Mitochondrial uncoupling protein 2; Short=AtPUMP2 gi|4063007|dbj|BAA36222.1| uncoupling protein [Arabidopsis thaliana] gi|9759228|dbj|BAB09640.1| uncoupling protein [Arabidopsis thaliana] gi|21593775|gb|AAM65742.1| uncoupling protein AtUCP2 [Arabidopsis thaliana] gi|332009741|gb|AED97124.1| uncoupling protein 2 [Arabidopsis thaliana] gi|385137896|gb|AFI41209.1| uncoupling protein 2, partial [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255558838|ref|XP_002520442.1| mitochondrial uncoupling protein, putative [Ricinus communis] gi|223540284|gb|EEF41855.1| mitochondrial uncoupling protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|7106157|dbj|BAA92172.1| uncoupling protein a [Symplocarpus renifolius] Back     alignment and taxonomy information
>gi|269784496|dbj|BAI49702.1| uncoupling protein a [Symplocarpus renifolius] Back     alignment and taxonomy information
>gi|224138994|ref|XP_002322953.1| predicted protein [Populus trichocarpa] gi|222867583|gb|EEF04714.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449450782|ref|XP_004143141.1| PREDICTED: mitochondrial uncoupling protein 2-like [Cucumis sativus] gi|449496627|ref|XP_004160183.1| PREDICTED: mitochondrial uncoupling protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|269784498|dbj|BAI49703.1| uncoupling protein [Lysichiton camtschatcensis] Back     alignment and taxonomy information
>gi|356496148|ref|XP_003516932.1| PREDICTED: mitochondrial uncoupling protein 3-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query245
TAIR|locus:2154593305 UCP2 "uncoupling protein 2" [A 1.0 0.803 0.820 1.1e-108
TAIR|locus:2080300306 PUMP1 "plant uncoupling mitoch 0.983 0.787 0.781 8.8e-102
UNIPROTKB|O97562309 UCP2 "Mitochondrial uncoupling 0.955 0.757 0.483 8.6e-56
MGI|MGI:109354309 Ucp2 "uncoupling protein 2 (mi 0.955 0.757 0.475 1.8e-55
MGI|MGI:1099787308 Ucp3 "uncoupling protein 3 (mi 0.967 0.769 0.467 3.7e-55
RGD|3933308 Ucp3 "uncoupling protein 3 (mi 0.967 0.769 0.467 3.7e-55
UNIPROTKB|F1PWF8309 UCP2 "Mitochondrial uncoupling 0.955 0.757 0.475 4.8e-55
RGD|3932309 Ucp2 "uncoupling protein 2 (mi 0.955 0.757 0.471 4.8e-55
UNIPROTKB|Q3SZI5309 UCP2 "Mitochondrial uncoupling 0.955 0.757 0.471 6.1e-55
UNIPROTKB|Q5XQS4308 UCP3 "Mitochondrial uncoupling 0.967 0.769 0.467 7.8e-55
TAIR|locus:2154593 UCP2 "uncoupling protein 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1074 (383.1 bits), Expect = 1.1e-108, P = 1.1e-108
 Identities = 201/245 (82%), Positives = 224/245 (91%)

Query:     1 MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 60
             +GT+ TIAREEG+  LW GVIAGLHRQCIYGGLRIGLY+PVKT LVGSDF+GDIPLYQKI
Sbjct:    61 IGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFIGDIPLYQKI 120

Query:    61 FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 120
              AALLTGAIAI+VANPTDLVKVRLQ+EGKLP+GVPRRY GA+DAY TIV+ EG+ ALWTG
Sbjct:   121 LAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEGVSALWTG 180

Query:   121 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 180
             LGPNIARNAIVNAAELASYDQ+KETI+KIP F D++ TH+LAGL AG FAVCIGSPIDVV
Sbjct:   181 LGPNIARNAIVNAAELASYDQIKETIMKIPFFRDSVLTHLLAGLAAGFFAVCIGSPIDVV 240

Query:   181 KSRMMGDSAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 240
             KSRMMGDS Y+NTVDCFIKT+K EG +AFYKGFLPNF+RLG+WN IMFLTLEQ KKVF+R
Sbjct:   241 KSRMMGDSTYRNTVDCFIKTMKTEGIMAFYKGFLPNFTRLGTWNAIMFLTLEQVKKVFLR 300

Query:   241 EVYFD 245
             EV +D
Sbjct:   301 EVLYD 305


GO:0005739 "mitochondrion" evidence=ISM
GO:0006839 "mitochondrial transport" evidence=IEA
GO:0017077 "oxidative phosphorylation uncoupler activity" evidence=ISS
GO:0031966 "mitochondrial membrane" evidence=IEA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006007 "glucose catabolic process" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2080300 PUMP1 "plant uncoupling mitochondrial protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|O97562 UCP2 "Mitochondrial uncoupling protein 2" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:109354 Ucp2 "uncoupling protein 2 (mitochondrial, proton carrier)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
MGI|MGI:1099787 Ucp3 "uncoupling protein 3 (mitochondrial, proton carrier)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3933 Ucp3 "uncoupling protein 3 (mitochondrial, proton carrier)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PWF8 UCP2 "Mitochondrial uncoupling protein 2" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|3932 Ucp2 "uncoupling protein 2 (mitochondrial, proton carrier)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZI5 UCP2 "Mitochondrial uncoupling protein 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q5XQS4 UCP3 "Mitochondrial uncoupling protein 3" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZWG1PUMP2_ARATHNo assigned EC number0.82040.93460.7508yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 8e-25
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-23
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-16
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 4e-09
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 4e-07
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 93.9 bits (234), Expect = 8e-25
 Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 153 TDNIFTHILAGLGAGLFAVCIGSPIDVVKSRMM-----GDSAYKNTVDCFIKTLKYEGFL 207
             +    +LAG  AG  A  +  P+DVVK+R+      G   YK  +DCF K  K EG  
Sbjct: 2   PLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIR 61

Query: 208 AFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFIR 240
             YKG LPN  R+     I F T E  KK+ ++
Sbjct: 62  GLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 245
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0752 320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760 302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0762 311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.97
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.96
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.96
KOG0766297 consensus Predicted mitochondrial carrier protein 99.96
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.95
KOG0036463 consensus Predicted mitochondrial carrier protein 99.95
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.95
KOG1519297 consensus Predicted mitochondrial carrier protein 99.94
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.94
KOG0765333 consensus Predicted mitochondrial carrier protein 99.94
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.93
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.93
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.92
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.9
KOG2745321 consensus Mitochondrial carrier protein [General f 99.83
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.82
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.78
KOG2954427 consensus Mitochondrial carrier protein [General f 99.73
KOG2745321 consensus Mitochondrial carrier protein [General f 99.72
KOG1519297 consensus Predicted mitochondrial carrier protein 99.54
KOG2954427 consensus Mitochondrial carrier protein [General f 98.64
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=8.2e-54  Score=329.89  Aligned_cols=237  Identities=27%  Similarity=0.414  Sum_probs=215.4

Q ss_pred             hhHHHHHhhhhhhHhhcchhHHHHHHHhhhhhhhhccHHHHHhhccCCCCCCCcHHHHHHHHHHHhHhHhhhcChHHHHH
Q 025978            2 GTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVK   81 (245)
Q Consensus         2 ~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pl~~ik   81 (245)
                      ++++.|+|.||++|||||+.|+++++.++|++||.+||.+|.++.+.......++..++.+++.||+++.++++|++++|
T Consensus        51 ~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvK  130 (299)
T KOG0764|consen   51 GALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYFFFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVK  130 (299)
T ss_pred             HHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEe
Confidence            68999999999999999999999999999999999999999999777666667999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCccccchHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCC----CchH
Q 025978           82 VRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFT----DNIF  157 (245)
Q Consensus        82 ~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  157 (245)
                      ||++.|..  +.....|+++++++++|+++||++|||+|+.|.+++ +...+++|.+||.+|....+..+.+    .+..
T Consensus       131 TRL~~Q~~--~~~~~~Y~~~f~a~rki~k~EG~rgLY~GlVP~L~G-vshgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~  207 (299)
T KOG0764|consen  131 TRLMLQSK--NVQSTAYKGMFDALRKIYKEEGFRGLYKGLVPGLLG-VSHGAIQFPAYEELKLRKNRKQGRSTDNHLSNL  207 (299)
T ss_pred             ehhhhhcc--cccccccccHHHHHHHHHHHHhHHHHHhhhhhHhhh-hchhhhhhhhHHHHHHHHHHhcCCCcccchhhH
Confidence            99999865  233458999999999999999999999999999996 6899999999999999985433322    2346


Q ss_pred             HHHHHHHHHHHHHHhhcCcHHHHHHhhcCC---CCCCCHHHHHHHHHHhhchhhhhcchhHHHHhhhhhHHHHHHHHHHH
Q 025978          158 THILAGLGAGLFAVCIGSPIDVVKSRMMGD---SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQA  234 (245)
Q Consensus       158 ~~~~~~~~a~~~~~~~~~Pld~i~~r~q~~---~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~  234 (245)
                      ..+..+.++.++++.++||.+|+|+|||.+   +.|++.++|++++|+.||++|||||+.++++|.+|.+.|+|.+||.+
T Consensus       208 ~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~~~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv  287 (299)
T KOG0764|consen  208 DYIALASLSKVFASTLTYPHQVLRTRLQDQSDNPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENV  287 (299)
T ss_pred             HHHHHHHHHHHHHHHhcchHHHHHHHHHhcccCcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHH
Confidence            667777799999999999999999999987   67899999999999999999999999999999999999999999999


Q ss_pred             HHHHhhh
Q 025978          235 KKVFIRE  241 (245)
Q Consensus       235 ~~~~~~~  241 (245)
                      ++++..+
T Consensus       288 ~~~L~~~  294 (299)
T KOG0764|consen  288 KHFLVTH  294 (299)
T ss_pred             HHHHhcc
Confidence            9988654



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-60
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 2e-12
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 115/242 (47%), Positives = 158/242 (65%), Gaps = 8/242 (3%) Query: 1 MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLV-GSDFVGDIPLYQK 59 +GT++T+ R EG +L+NG++AGL RQ + +RIGLYD VK F GS+ G + + Sbjct: 51 LGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAG---IGSR 107 Query: 60 IFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWT 119 + A TGA+A+ VA PTD+VKVR QA+ + G RRY ++AY TI R+EG+ LW Sbjct: 108 LLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGG--RRYQSTVEAYKTIAREEGIRGLWK 165 Query: 120 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDV 179 G PN+ARNAIVN AEL +YD +K+T+LK TD++ H + GAG I SP+DV Sbjct: 166 GTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDV 225 Query: 180 VKSRMMGDS--AYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKV 237 VK+R M + Y + C + L+ EG AFYKGF+P+F RLGSWNV+MF+T EQ K+ Sbjct: 226 VKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRA 285 Query: 238 FI 239 + Sbjct: 286 LM 287
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-112
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 8e-46
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 9e-30
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-42
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-32
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-11
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  322 bits (828), Expect = e-112
 Identities = 111/247 (44%), Positives = 153/247 (61%), Gaps = 6/247 (2%)

Query: 1   MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 60
           +GT++T+ R EG  +L+NG++AGL RQ  +  +RIGLYD VK F           +  ++
Sbjct: 51  LGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS--EHAGIGSRL 108

Query: 61  FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 120
            A   TGA+A+ VA PTD+VKVR QA+ +      RRY   ++AY TI R+EG+  LW G
Sbjct: 109 LAGSTTGALAVAVAQPTDVVKVRFQAQARAGG--GRRYQSTVEAYKTIAREEGIRGLWKG 166

Query: 121 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 180
             PN+ARNAIVN AEL +YD +K+T+LK    TD++  H  +  GAG     I SP+DVV
Sbjct: 167 TSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVV 226

Query: 181 KSRMMGDSA--YKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVF 238
           K+R M  +   Y +   C +  L+ EG  AFYKGF+P+F RLGSWNV+MF+T EQ K+  
Sbjct: 227 KTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 286

Query: 239 IREVYFD 245
           +      
Sbjct: 287 MAAYQSR 293


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query245
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=1.1e-51  Score=340.20  Aligned_cols=235  Identities=48%  Similarity=0.826  Sum_probs=215.2

Q ss_pred             hhHHHHHhhhhhhHhhcchhHHHHHHHhhhhhhhhccHHHHHhhccCCCCCCCcHHHHHHHHHHHhHhHhhhcChHHHHH
Q 025978            2 GTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVK   81 (245)
Q Consensus         2 ~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pl~~ik   81 (245)
                      +++++|+++||++|||||+.+++++.++..+++|.+||.+++.+.+...  ..+....+++|++||+++.++++|+|+||
T Consensus        52 ~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~~~~--~~~~~~~~~ag~~ag~~~~~~~~Pld~vk  129 (303)
T 2lck_A           52 GTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSE--HAGIGSRLLAGSTTGALAVAVAQPTDVVK  129 (303)
T ss_dssp             HHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSCCCS--SCCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred             HHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--CCcHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence            6789999999999999999999999999999999999999998865421  46778999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCCccccchHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCCCchHHHHH
Q 025978           82 VRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHIL  161 (245)
Q Consensus        82 ~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (245)
                      +|+|++...  +...+|+++++++++|+++||+++||||+.|++++.++..+++|.+||.+++.+.+....+++....++
T Consensus       130 trlq~~~~~--~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~~~~~  207 (303)
T 2lck_A          130 VRFQAQARA--GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFT  207 (303)
T ss_dssp             HHHHHSCSC--CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHHHHHH
T ss_pred             HHHhccccc--CCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHH
Confidence            999998642  223478999999999999999999999999999999999999999999999988765444567788999


Q ss_pred             HHHHHHHHHHhhcCcHHHHHHhhcCC--CCCCCHHHHHHHHHHhhchhhhhcchhHHHHhhhhhHHHHHHHHHHHHHHHh
Q 025978          162 AGLGAGLFAVCIGSPIDVVKSRMMGD--SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTLEQAKKVFI  239 (245)
Q Consensus       162 ~~~~a~~~~~~~~~Pld~i~~r~q~~--~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~i~~~~~~~~~~~~~  239 (245)
                      +|+++|++++++++|+|+||+|+|.+  ..|.++++|+++|+++||++|||||+.++++|.+|.++++|.+||.+|+.+.
T Consensus       208 ~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~  287 (303)
T 2lck_A          208 SAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM  287 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHHHHcCHHHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998  4599999999999999999999999999999999999999999999998775


Q ss_pred             h
Q 025978          240 R  240 (245)
Q Consensus       240 ~  240 (245)
                      +
T Consensus       288 ~  288 (303)
T 2lck_A          288 A  288 (303)
T ss_dssp             C
T ss_pred             H
Confidence            4



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 245
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-20
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-15
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-06
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 85.5 bits (210), Expect = 2e-20
 Identities = 57/243 (23%), Positives = 89/243 (36%), Gaps = 14/243 (5%)

Query: 1   MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGD---IPLY 57
           +  VV I +E+G  + W G +A + R      L     D  K   +G             
Sbjct: 53  IDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFA 112

Query: 58  QKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGAL 117
             + +    GA ++    P D  + RL A+    +   R + G  +    I + +GL  L
Sbjct: 113 GNLASGGAAGATSLCFVYPLDFARTRLAADVGKGA-AQREFTGLGNCITKIFKSDGLRGL 171

Query: 118 WTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPI 177
           + G   ++    I  AA    YD      +       +I    +        A  +  P 
Sbjct: 172 YQGFNVSVQGIIIYRAAYFGVYDT--AKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPF 229

Query: 178 DVVKSRMMGDSA-------YKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLT 230
           D V+ RMM  S        Y  TVDC+ K  K EG  AF+KG   N  R G     + + 
Sbjct: 230 DTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR-GMGGAFVLVL 288

Query: 231 LEQ 233
            ++
Sbjct: 289 YDE 291


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query245
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=4e-44  Score=291.59  Aligned_cols=229  Identities=24%  Similarity=0.356  Sum_probs=202.7

Q ss_pred             hhHHHHHhhhhhhHhhcchhHHHHHHHhhhhhhhhccHHHHHhhccCCCCCC---CcHHHHHHHHHHHhHhHhhhcChHH
Q 025978            2 GTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGD---IPLYQKIFAALLTGAIAIVVANPTD   78 (245)
Q Consensus         2 ~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~a~~~~~~~~~Pl~   78 (245)
                      +++++++++||+++||||+.++++...+...++|.+++.+++.+.+......   ......+.+|.+|++++.++++|+|
T Consensus        54 ~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~  133 (292)
T d1okca_          54 DCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLD  133 (292)
T ss_dssp             HHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhh
Confidence            6789999999999999999999999999999999999999998865433222   3345778899999999999999999


Q ss_pred             HHHHHHhhcCCCCCCCCccccchHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCCCchHH
Q 025978           79 LVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFT  158 (245)
Q Consensus        79 ~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (245)
                      ++|+|+|.+..... ..+.+.+..+.+++++++||+++||+|+.+++++++++++++|..||.+++.+.+.  .......
T Consensus       134 ~ik~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~  210 (292)
T d1okca_         134 FARTRLAADVGKGA-AQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--KNVHIIV  210 (292)
T ss_dssp             HHHHHHHHCCCSST-TTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG--GCSCHHH
T ss_pred             hhheeeeccccccc-cccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc--cccchHH
Confidence            99999999865332 23478899999999999999999999999999999999999999999999877543  2356788


Q ss_pred             HHHHHHHHHHHHHhhcCcHHHHHHhhcCC-------CCCCCHHHHHHHHHHhhchhhhhcchhHHHHhhhhhHHHHHHHH
Q 025978          159 HILAGLGAGLFAVCIGSPIDVVKSRMMGD-------SAYKNTVDCFIKTLKYEGFLAFYKGFLPNFSRLGSWNVIMFLTL  231 (245)
Q Consensus       159 ~~~~~~~a~~~~~~~~~Pld~i~~r~q~~-------~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~i~~~~~  231 (245)
                      .++++.+++++++++++|+|+||+|+|.+       ..|.++++|+++++++||+++||||+.++++|.++ +++.|.+|
T Consensus       211 ~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~y  289 (292)
T d1okca_         211 SWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLY  289 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHh
Confidence            89999999999999999999999999987       35889999999999999999999999999999755 68889999


Q ss_pred             HHH
Q 025978          232 EQA  234 (245)
Q Consensus       232 ~~~  234 (245)
                      |.+
T Consensus       290 e~l  292 (292)
T d1okca_         290 DEI  292 (292)
T ss_dssp             HTC
T ss_pred             hcC
Confidence            963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure