Citrus Sinensis ID: 025990

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
Protein Sequence
MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGVVSSNNLNITKNSHKNQLQVIDFSVIEADQTDLLGPPPQPVSSCSSEITADELSPSVLDQEETSA
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccEEEccccEEEEEEEEEEEcccccccccccccEEEEEEccccccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccHHHHHHHHHHHHHccccccccEEEEEEccccccccccHHccccEEEEEcccccccccccccccccccccccEEcccccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEEcccccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mekqnnyvvngglklpigyrfrptdEELVVHYLKRKvfglplpasiipeldvfqshplglpgdmkekKRYFFSnirnesaidndgkckiaagsgywkpvgknrqilASGTKQVVGIRKTLIfcegkrghetKTQWVMHQYHLVAIAtntnltqpvfKMVIIGDWVVYRIFQrkkkpkkrgvvssnnlnitknshknQLQVIDFSvieadqtdllgpppqpvsscsseitadelspsvldqeetsa
Flexible Loop (DISEMBL)
mekqnnyvvngglklpigyrfRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMKEKKRYFFSNIrnesaidndgkCKIAAGSGYWKPVGKNRQIlasgtkqvvgIRKTLIFCEGKRGHETKTQWVMHQYHLVAIAtntnltqpVFKMVIIGDWVVYRIFqrkkkpkkrgvvssnnlnitknshknQLQVIDFSVIEADQTDLLGPPPQPVSSCSseitadelspsvldqeetsa
Low Complexity Region (SEG)
MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGVVSSNNLNITKNSHKNQLQVIDFSVIEADQTDLLGPPPQPVSSCSSEITADELSPSVLDQEETSA
Disordered region (IsUnstruct)
******YVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQR************************QLQVIDFSVIE**************************************
Disordered Region (DISOPRED)
****************IGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAI***************IGDWVVYRIF***************************************************************************
Disordered Region (DISEMBL)
MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQR*********VSSNNLNITKNSHKNQLQVIDFSVIEADQTDLL*******************************
Disordered Region (DISPRO)
*************KLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIA***********MVIIGDWVVYRIFQRKK***********************************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGVVSSNNLNITKNSHKNQLQVIDFSVIEADQTDLLGPPPQPVSSCSSEITADELSPSVLDQEETSA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	245	2.2.26 [Sep-21-2011]
A2YMR0	425	NAC transcription factor	N/A	no	0.653	0.376	0.398	1e-29
Q8H4S4	425	NAC transcription factor	yes	no	0.653	0.376	0.393	2e-29
A0SPJ3	405	NAC transcription factor	N/A	no	0.653	0.395	0.387	4e-29
A0SPJ6	396	NAC transcription factor	N/A	no	0.653	0.404	0.395	1e-28
A0SPJ8	406	NAC transcription factor	N/A	no	0.653	0.394	0.414	2e-28
D2SMN4	406	NAC transcription factor	N/A	no	0.653	0.394	0.409	3e-28
A0SPJ9	402	NAC transcription factor	N/A	no	0.653	0.398	0.389	5e-28
A0SPJ4	405	NAC transcription factor	N/A	no	0.653	0.395	0.404	7e-28
Q53NF7	329	NAC domain-containing pro	no	no	0.653	0.486	0.388	3e-27
Q52QH4	318	NAC domain-containing pro	no	no	0.775	0.597	0.353	7e-27

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  130 bits (326), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 103/178 (57%), Gaps = 18/178 (10%)

Query: 14  KLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYF 71
           +LP G+RF PTDEELVVHYLK+K   +PLP +II E+D+++  P  LP   +  E++ YF
Sbjct: 28  ELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANFGEQEWYF 87

Query: 72  FSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASG-TKQVVGIRKTLIFCEGKRGHE 130
           FS    +    N  +   AA SGYWK  G ++ I+ASG T++ VG++K L+F  GK    
Sbjct: 88  FSP--RDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPKG 145

Query: 131 TKTQWVMHQYHL-------VAIATNTNLTQPVFK------MVIIGDWVVYRIFQRKKK 175
            KT W+MH+Y L        A+AT      P+         + + DWV+ RI+++  K
Sbjct: 146 VKTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCRIYKKTNK 203

Transcription factor of the NAC family associated with male fertility.
Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  129 bits (323), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 103/178 (57%), Gaps = 18/178 (10%)

Query: 14  KLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYF 71
           +LP G+RF PTDEELVVHYLK+K   +PLP +II E+D+++  P  LP   +  E++ YF
Sbjct: 28  ELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEKANFGEQEWYF 87

Query: 72  FSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASG-TKQVVGIRKTLIFCEGKRGHE 130
           FS    +    N  +   AA SGYWK  G ++ I++SG T++ VG++K L+F  GK    
Sbjct: 88  FSP--RDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKG 145

Query: 131 TKTQWVMHQYHL-------VAIATNTNLTQPVFK------MVIIGDWVVYRIFQRKKK 175
            KT W+MH+Y L        A+AT      P+         + + DWV+ RI+++  K
Sbjct: 146 VKTNWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLCRIYKKTNK 203

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score =  128 bits (321), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 18/178 (10%)

Query: 14  KLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYF 71
           +LP G+RF PTDEELVVHYLK+K   +PLP +II E+D+++  P  LP      E++ YF
Sbjct: 32  ELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWYF 91

Query: 72  FSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGT-----KQVVGIRKTLIFCEGK 126
           FS    +    N  +   AA SGYWK  G ++ ILASGT     ++ +G++K L+F  GK
Sbjct: 92  FSP--RDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYRGK 149

Query: 127 RGHETKTQWVMHQYHLVAIATNTNLTQP---------VFKMVIIGDWVVYRIFQRKKK 175
                KT W+MH+Y L  ++ +T  ++P             + + DWV+ RI+++  K
Sbjct: 150 PPKGLKTNWIMHEYRLTDVSGSTTTSRPPPPVTGGSRAAASLRLDDWVLCRIYKKINK 207

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  126 bits (316), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 101/172 (58%), Gaps = 12/172 (6%)

Query: 14  KLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYF 71
           +LP G+RF PTDEELVVHYLK+K   +PLP +II E+D+++  P  LP      E++ YF
Sbjct: 27  ELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKATFGEQEWYF 86

Query: 72  FSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGT-KQVVGIRKTLIFCEGKRGHE 130
           FS    +    N  +   AA SGYWK  G ++ ILASG  ++ VG++K L+F  GK    
Sbjct: 87  FS--PRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPPKG 144

Query: 131 TKTQWVMHQYHLVAIATNTNLTQPV-------FKMVIIGDWVVYRIFQRKKK 175
            KT W+MH+Y L   +++   ++P           + + DWV+ RI+++  K
Sbjct: 145 LKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYKKINK 196

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score =  125 bits (315), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 101/176 (57%), Gaps = 16/176 (9%)

Query: 14  KLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYF 71
           +LP G+RF PTDEELVVHYLK+K    PLP +II E+D+++  P  LP      E + YF
Sbjct: 34  ELPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYF 93

Query: 72  FSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGT---KQVVGIRKTLIFCEGKRG 128
           FS    + A  N  +   AA SGYWK  G ++ ILAS T   ++ VG++K L+F  GK  
Sbjct: 94  FSPRDRKYA--NGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPP 151

Query: 129 HETKTQWVMHQYHLV---AIATNTNLTQPVF------KMVIIGDWVVYRIFQRKKK 175
              KT W+MH+Y L    A +T T+   PV         + + DWV+ RI+++  K
Sbjct: 152 RGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSK 207

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score =  125 bits (313), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 100/176 (56%), Gaps = 16/176 (9%)

Query: 14  KLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYF 71
           +LP G+RF PTDEELVVHYLK+K    PLP +II E+D+++  P  LP      E + YF
Sbjct: 34  ELPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYF 93

Query: 72  FSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGT---KQVVGIRKTLIFCEGKRG 128
           FS    +    N  +   AA SGYWK  G ++ ILAS T   ++ VG++K L+F  GK  
Sbjct: 94  FSP--RDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPP 151

Query: 129 HETKTQWVMHQYHLV---AIATNTNLTQPVF------KMVIIGDWVVYRIFQRKKK 175
              KT W+MH+Y L    A +T T+   PV         + + DWV+ RI+++  K
Sbjct: 152 RGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSK 207

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  124 bits (312), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 12/172 (6%)

Query: 14  KLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYF 71
           +LP G+RF PTDEELVVHYLK+K   +PLP +II E+D+++  P  LP      E++ YF
Sbjct: 27  ELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWYF 86

Query: 72  FSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGT-KQVVGIRKTLIFCEGKRGHE 130
           FS    +    N  +   AA SGYWK  G ++ ILASG  ++ VG++  L+F  GK    
Sbjct: 87  FS--PRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKXALVFYRGKPPKG 144

Query: 131 TKTQWVMHQYHLVAIATNTNLTQPV-------FKMVIIGDWVVYRIFQRKKK 175
            KT W+MH+Y L   +++   ++P           + + DWV+ RI+++  K
Sbjct: 145 LKTNWIMHEYRLTDASSSAATSRPPPVTGGSRAASLRLDDWVLCRIYKKINK 196

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score =  124 bits (310), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 102/178 (57%), Gaps = 18/178 (10%)

Query: 14  KLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYF 71
           +LP G+RF PTDEELVVHYLK+K    PLP +II E+D+++  P  LP    + E++ YF
Sbjct: 33  ELPPGFRFHPTDEELVVHYLKKKADKAPLPVNIIAEVDLYKFDPWELPEKATIGEQEWYF 92

Query: 72  FSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGT-----KQVVGIRKTLIFCEGK 126
           FS    +    N  +   AA SGYWK  G ++ ILASGT     ++ +G++K L+F  GK
Sbjct: 93  FS--PRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYRGK 150

Query: 127 RGHETKTQWVMHQYHLVAIA---TNTNLTQPV------FKMVIIGDWVVYRIFQRKKK 175
                KT W+MH+Y L   +   T TN   PV         + + DWV+ RI+++  K
Sbjct: 151 PPKGLKTNWIMHEYRLTDASGSTTATNRPPPVTGGSRAAASLRLDDWVLCRIYKKINK 208

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).

Triticum dicoccoides (taxid: 85692)

>sp|Q53NF7|NAC71_ORYSJ NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1

 Score =  122 bits (305), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 98/170 (57%), Gaps = 10/170 (5%)

Query: 9   VNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDM--KE 66
             G L+LP G+RF PTD+ELV++YL RK  GLPL A +I E+D+++ +P  LP      E
Sbjct: 3   CGGALQLPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMGGE 62

Query: 67  KKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGK 126
           K+ YFFS    +    N  +   AAG+GYWK  G ++ +   G+ + V I+K L+F  GK
Sbjct: 63  KEWYFFSP--RDRKYPNGQRPNRAAGTGYWKATGADKPV---GSPRAVAIKKALVFYAGK 117

Query: 127 RGHETKTQWVMHQYHLVAI---ATNTNLTQPVFKMVIIGDWVVYRIFQRK 173
                KT W+MH+Y L  +   A    L++     + + DWV+ RI+ +K
Sbjct: 118 PPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKK 167

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  120 bits (302), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 11/201 (5%)

Query: 13  LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD--MKEKKRY 70
           L LP G+RF PTDEELVVHYL RKV   PLP  II E+D+++  P  LP       K+ Y
Sbjct: 19  LNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWY 78

Query: 71  FFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHE 130
           FF+    +    N  +   AAG GYWK  G ++ +   G+ + VGI+K L+F  GK    
Sbjct: 79  FFTP--RDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRG 136

Query: 131 TKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGV----VSSNN 186
            KT W+MH+Y L          +   K   + +WV+ R++ +K   +K  +    V+S  
Sbjct: 137 VKTDWIMHEYRLADADRAPGGKKGSQK---LDEWVLCRLYNKKNNWEKVKLEQQDVASVA 193

Query: 187 LNITKNSHKNQLQVIDFSVIE 207
               +N H    +V+D +  +
Sbjct: 194 AAAPRNHHHQNGEVMDAAAAD 214

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
255543647	242	transcription factor, putative [Ricinus	0.922	0.933	0.547	3e-65
224055785	244	NAC domain protein, IPR003441 [Populus t	0.897	0.901	0.528	2e-58
224129252	247	NAC domain protein, IPR003441 [Populus t	0.885	0.878	0.525	4e-57
302399029	263	NAC domain class transcription factor [M	0.881	0.821	0.492	7e-50
225451537	241	PREDICTED: NAC domain-containing protein	0.734	0.746	0.526	4e-49
296082304	162	unnamed protein product [Vitis vinifera]	0.657	0.993	0.544	2e-46
358248440	217	uncharacterized protein LOC100815663 [Gl	0.861	0.972	0.457	5e-44
224053533	257	NAC domain protein, IPR003441 [Populus t	0.959	0.914	0.433	2e-41
224075517	255	NAC domain protein, IPR003441 [Populus t	0.942	0.905	0.422	1e-40
351724343	229	NAC domain protein [Glycine max] gi|1879	0.885	0.947	0.428	5e-40

>gi|255543647|ref|XP_002512886.1| transcription factor, putative [Ricinus communis] gi|223547897|gb|EEF49389.1| transcription factor, putative [Ricinus communis]

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 133/243 (54%), Positives = 169/243 (69%), Gaps = 17/243 (6%)

Query: 1   MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGL 60
           MEK +N V NGG+KLPIGYRF PTDEELVVHYL+RKVFG PLPAS+IPELDVFQ+ P  L
Sbjct: 1   MEK-SNLVANGGMKLPIGYRFHPTDEELVVHYLRRKVFGFPLPASVIPELDVFQTDPWNL 59

Query: 61  PGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTL 120
           PGD+KEK+ +F   + NES   N    + AAGSGYWKP GK R I+AS    +VG+RKT 
Sbjct: 60  PGDLKEKRYFFSRKLGNESENRN----RRAAGSGYWKPTGKGRPIIASFGNHIVGLRKTF 115

Query: 121 IFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRG 180
           +FCEGK  +E+KTQW+MH+Y LV   T  N +Q VFK+  +GDWVVYR+FQ+K++ KK+G
Sbjct: 116 LFCEGKNPNESKTQWIMHEYRLVGSGTLLNTSQ-VFKLN-LGDWVVYRVFQKKRRSKKQG 173

Query: 181 VVSSNNLNITKNSHKNQLQVIDFSVIEADQTDLLGPPPQPVSSCSSEITADELSPSVLDQ 240
            +S ++   +        +V+  S +E    +     PQP S CSS IT  E+S + LDQ
Sbjct: 174 TISKSSSTCS--------EVMSSSFMEFTMVECSDVGPQPSSPCSSGIT--EVSSNGLDQ 223

Query: 241 EET 243
           EET
Sbjct: 224 EET 226

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224055785|ref|XP_002298652.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222845910|gb|EEE83457.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/246 (52%), Positives = 162/246 (65%), Gaps = 26/246 (10%)

Query: 6   NYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMK 65
           N+V NGGL+LPIGYRF PTDEELVVHYLKRKV GLPLPA++IPE DVFQ+ P  LPG++K
Sbjct: 5   NFVENGGLRLPIGYRFHPTDEELVVHYLKRKVLGLPLPAAVIPEFDVFQTDPWSLPGNLK 64

Query: 66  EKKRYFFSNIRNESAIDNDGKCKIAAG---SGYWKPVGKNRQILASGTKQVVGIRKTLIF 122
           E KRYFFS    +   D   KCK +AG   SGYWKPVGK +QI+ASG+ Q VGIRKTL+F
Sbjct: 65  E-KRYFFS---QKKLNDFGTKCKRSAGYIPSGYWKPVGKGKQIVASGSNQAVGIRKTLVF 120

Query: 123 CEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGVV 182
            E     +T+TQWVMH+Y LV + T+   TQ       +GDWV   IF RK+KPK   V+
Sbjct: 121 RERNHSSKTRTQWVMHEYCLVGLPTDPKTTQ-------VGDWVANSIFHRKRKPKNHVVM 173

Query: 183 SSNNLNITKNSHKNQLQVIDFSVIE---ADQTDLLGPPPQPVSSCSSEITADELSPSVLD 239
            SN  NI K   +  +++I  S ++      +D  G P Q    CSS +T  E+S +  D
Sbjct: 174 ISNPSNINK---RQNVEIISPSFMDFMMEQSSDEAGAPSQ----CSSGVT--EVSSNEFD 224

Query: 240 QEETSA 245
           QEE S+
Sbjct: 225 QEEISS 230

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129252|ref|XP_002328928.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222839358|gb|EEE77695.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  227 bits (578), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 122/232 (52%), Positives = 159/232 (68%), Gaps = 15/232 (6%)

Query: 6   NYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMK 65
           N+V NGG KLPIGYRF PTDEELVVHYLKRKV GLP+PAS+IPE DVFQ+ P  LPG++K
Sbjct: 5   NFVENGGFKLPIGYRFHPTDEELVVHYLKRKVLGLPMPASVIPEFDVFQNDPSSLPGNLK 64

Query: 66  EKKRYFFSNIRNESAIDNDGKCKIAAG---SGYWKPVGKNRQILASGTKQVVGIRKTLIF 122
           E KRYFFS  +     D   KCK  AG   SGYWKP+GK +QI+AS + + VG RKTL+F
Sbjct: 65  E-KRYFFSQKKWN---DFGTKCKRTAGSGPSGYWKPIGKGKQIVASDSNKAVGTRKTLVF 120

Query: 123 CEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGVV 182
            E K   +T++QWVMH Y L   AT    TQ    M  +GDWV Y +FQRK+KP+K  V+
Sbjct: 121 KERKHSIKTRSQWVMHGYCLAGSATGPKTTQ----MEEVGDWVAYSVFQRKRKPRKNVVI 176

Query: 183 SS-NNLNITKNSHKNQLQVIDFSVIEADQTDLLGPPPQPVSSCSSEITADEL 233
           S+ +N+N T+N        +DF + ++  +D +G PP P SS  +E++++E+
Sbjct: 177 SNPSNINETRNVEIISPSFMDFMMEQS--SDGVG-PPSPCSSGVTEVSSNEV 225

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399029|gb|ADL36809.1| NAC domain class transcription factor [Malus x domestica]

 Score =  203 bits (516), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 124/252 (49%), Positives = 160/252 (63%), Gaps = 36/252 (14%)

Query: 4   QNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD 63
           + NYV+NGG+K+P+GYRFRPTDEELV+HYL RKV   PLPASIIPE DVF++HP GLPGD
Sbjct: 5   KENYVINGGVKMPVGYRFRPTDEELVLHYLMRKVHAAPLPASIIPEFDVFETHPWGLPGD 64

Query: 64  MKEKKRYFFSNIRNESAIDNDG-KCKIAAGSGYWKPVGKNRQIL-ASGTKQVVGIRKTLI 121
           ++  KRYFF    NE+   N G   K AAG GYWKP+GK +QI+  S + + VGIRKTL+
Sbjct: 65  VR-GKRYFF---HNENMNKNVGINSKRAAGCGYWKPIGKKKQIVNNSESNEAVGIRKTLV 120

Query: 122 FCE-----------GKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIF 170
           FCE           G     T+T+W+MH+Y L  +A+  N TQ + K    G+WVV RIF
Sbjct: 121 FCERKRRRCHHHHHGSTNTTTQTRWLMHEYRL--LASQANPTQVLEKES--GNWVVCRIF 176

Query: 171 QRKKKPKKR-----GVVS--SNNLNITKNSHKNQLQVIDFS-VIEADQTDLLGPPPQPVS 222
           Q+K++P +R     GVVS  S+N   T+   ++ +   D S   + D T L  P      
Sbjct: 177 QKKRRPTQRTSDDMGVVSQRSSNCKKTRRLLEDYISADDHSRRSDPDLTTLSSP------ 230

Query: 223 SCSSEITADELS 234
           SCSS+IT  ELS
Sbjct: 231 SCSSDITH-ELS 241

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451537|ref|XP_002273649.1| PREDICTED: NAC domain-containing protein 68 [Vitis vinifera] gi|147820260|emb|CAN71479.1| hypothetical protein VITISV_038623 [Vitis vinifera]

 Score =  200 bits (509), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 99/188 (52%), Positives = 130/188 (69%), Gaps = 8/188 (4%)

Query: 1   MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGL 60
           MEK +     G +KLPIG+RF PTDEELVVHYLKRK    PLPAS+IPE DVF ++P  L
Sbjct: 1   MEKPSFVRSGGMVKLPIGFRFHPTDEELVVHYLKRKALSFPLPASVIPEFDVFLTNPWDL 60

Query: 61  PGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTL 120
           PGD+KE +RYFFS     S      KC+   G GYWK +GK+ QI+ASG+ + VG+++TL
Sbjct: 61  PGDVKE-RRYFFS-----SGKGFGNKCRRVTGCGYWKAIGKDIQIVASGSSRAVGMKRTL 114

Query: 121 IFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRG 180
           +F EGK G  T+TQWVMH+Y LV + T  + TQ   +   + DWVVYR+FQ++++PK+ G
Sbjct: 115 VFYEGKLGAGTRTQWVMHEYRLVGLGTAPSSTQKCVEE--MEDWVVYRMFQKRRRPKRHG 172

Query: 181 VVSSNNLN 188
           V S  + N
Sbjct: 173 VSSQPSTN 180

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082304|emb|CBI21309.3| unnamed protein product [Vitis vinifera]

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 92/169 (54%), Positives = 122/169 (72%), Gaps = 8/169 (4%)

Query: 13  LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMKEKKRYFF 72
           +KLPIG+RF PTDEELVVHYLKRK    PLPAS+IPE DVF ++P  LPGD+KE +RYFF
Sbjct: 2   VKLPIGFRFHPTDEELVVHYLKRKALSFPLPASVIPEFDVFLTNPWDLPGDVKE-RRYFF 60

Query: 73  SNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETK 132
           S     S      KC+   G GYWK +GK+ QI+ASG+ + VG+++TL+F EGK G  T+
Sbjct: 61  S-----SGKGFGNKCRRVTGCGYWKAIGKDIQIVASGSSRAVGMKRTLVFYEGKLGAGTR 115

Query: 133 TQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGV 181
           TQWVMH+Y LV + T  + TQ   +   + DWVVYR+FQ++++PK+ G+
Sbjct: 116 TQWVMHEYRLVGLGTAPSSTQKCVEE--MEDWVVYRMFQKRRRPKRHGL 162

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248440|ref|NP_001239882.1| uncharacterized protein LOC100815663 [Glycine max] gi|255642301|gb|ACU21415.1| unknown [Glycine max]

 Score =  183 bits (465), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/245 (45%), Positives = 147/245 (60%), Gaps = 34/245 (13%)

Query: 1   MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGL 60
           M +  N+VV GG+KLPIG+RF PTDEEL++HYLK+K F   LPAS+I E DVFQ+ P  L
Sbjct: 1   MGRFENHVVKGGIKLPIGFRFCPTDEELLLHYLKKKAFAQQLPASVISEFDVFQTEPWKL 60

Query: 61  PGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTL 120
           PG+++E  RYFFSN  N       G  K  AGSG WK VGK +QI+ S + QV+G+++TL
Sbjct: 61  PGELRE-NRYFFSNRSN-------GNIKRPAGSGCWKSVGKEKQIIHSESNQVIGMKETL 112

Query: 121 IFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRG 180
            FC+G   HET+TQWVMH+  LVA       + P    + + D+ VYRIFQ+ K   +R 
Sbjct: 113 FFCKG--SHETRTQWVMHELRLVA-------SYPC--QMPVADFAVYRIFQKNKMKTRRS 161

Query: 181 VVSSNNLNITKNSHKNQLQ-VIDFSVIEADQT-----DLLGPPPQPVSSCSSEITADELS 234
                  +  K S  ++LQ ++D      D T     D +G PP P S C SE    E+S
Sbjct: 162 -------HGKKPSSSSKLQRLVDVKASFFDFTVDFNHDDIG-PPTPCSPCLSE-GCSEIS 212

Query: 235 PSVLD 239
            S LD
Sbjct: 213 SSKLD 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053533|ref|XP_002297860.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222845118|gb|EEE82665.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/256 (43%), Positives = 152/256 (59%), Gaps = 21/256 (8%)

Query: 1   MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGL 60
           MEK + +V NG L+LP G+RF PTDEELVV YLKRKVF  PLPASIIPE+DV +S P  L
Sbjct: 1   MEKLS-FVKNGVLRLPPGFRFHPTDEELVVQYLKRKVFACPLPASIIPEVDVCKSDPWDL 59

Query: 61  PGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTL 120
           PGD+ E++RYFFS    E+   N  +   A GSGYWK  G ++QI+ S   QVVG++KTL
Sbjct: 60  PGDL-EQERYFFST--REAKYPNGNRSNRATGSGYWKATGIDKQIVTSKGHQVVGMKKTL 116

Query: 121 IFCEGKRGHETKTQWVMHQYHLVAIAT-------NTNLTQ-PVFKMVIIGDWVVYRIFQR 172
           +F  GK  H T+T W+MH+Y L +  T       N N TQ PV  +V + +WV+ RIF +
Sbjct: 117 VFYRGKPPHGTRTDWIMHEYRLASTETTACNTLKNKNSTQGPV--VVPMENWVLCRIFLK 174

Query: 173 KKKPKKRGVVSSNNLNITKNSHKNQLQVID---FSVIEADQTDLLGPPPQPVSSCSSEIT 229
           K+  K        N+ +  ++   +L+  +   +  +  ++T  L   P   SS SS IT
Sbjct: 175 KRGTKN----EEENIQVGNDNRLPKLRATEPVFYDFMTKEKTTDLNLAPSSSSSGSSGIT 230

Query: 230 ADELSPSVLDQEETSA 245
            +       D EE+S+
Sbjct: 231 EEVSCNESDDHEESSS 246

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075517|ref|XP_002304662.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222842094|gb|EEE79641.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/258 (42%), Positives = 149/258 (57%), Gaps = 27/258 (10%)

Query: 1   MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGL 60
           MEK N +V NG ++LP G+RF PTDEELVV YLKRKVF  PLPASIIPE+DV +S P  L
Sbjct: 1   MEKLN-FVKNGAVRLPPGFRFHPTDEELVVQYLKRKVFACPLPASIIPEVDVCKSDPWDL 59

Query: 61  PGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTL 120
           PGD+ E++RYFFS    E+   N  +   A GSGYWK  G ++QI+ S   Q VG++KTL
Sbjct: 60  PGDL-EQERYFFST--REAKYPNGNRSNRATGSGYWKATGIDKQIVTSKGNQAVGMKKTL 116

Query: 121 IFCEGKRGHETKTQWVMHQYHLVAIAT-------NTNLTQPVFKMVIIGDWVVYRIFQRK 173
           +F  GK  H T+T W+MH+Y L +  T       N N  Q     V + +WV+ RIF +K
Sbjct: 117 VFYRGKPPHGTRTDWIMHEYRLASTETAACNALLNKNSIQGSV-AVPMENWVLCRIFLKK 175

Query: 174 KKPKKRGVVSSNNLNITKNSHKNQLQVI-----DFSVIEADQTDL-LGPPPQPVSSCSSE 227
           +  K        N+    ++  ++L+       DF + +   TDL L P     SS  +E
Sbjct: 176 RSTKN----EEENMQFDNDNRLSKLRTTKPVFYDF-MTKHRTTDLNLAPSSSSGSSGITE 230

Query: 228 ITADELSPSVLDQEETSA 245
           ++ +E      D EE+S+
Sbjct: 231 VSCNESD----DHEESSS 244

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724343|ref|NP_001238078.1| NAC domain protein [Glycine max] gi|187940283|gb|ACD39372.1| NAC domain protein [Glycine max]

 Score =  170 bits (431), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/245 (42%), Positives = 144/245 (58%), Gaps = 28/245 (11%)

Query: 1   MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGL 60
           MEK + +V NG L+LP G+RF PTDEELV+ YLKRKVF  PLPASIIPE+DV +S P  L
Sbjct: 1   MEKVS-FVKNGELRLPPGFRFHPTDEELVLQYLKRKVFSCPLPASIIPEVDVCKSDPWDL 59

Query: 61  PGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTL 120
           PGD+ E++RYFFS    E+   N  +   A  SGYWK  G ++QI+ S   QVVG++KTL
Sbjct: 60  PGDL-EQERYFFST--KEAKYPNGNRSNRATNSGYWKATGLDKQIVTSKGNQVVGMKKTL 116

Query: 121 IFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRG 180
           +F  GK  H ++T W+MH+Y L       N+       V + +WV+ RIF +K+   K G
Sbjct: 117 VFYRGKPPHGSRTDWIMHEYRL-------NILNASQSHVPMENWVLCRIFLKKRSGAKNG 169

Query: 181 VVSSNNLNITKNSHKNQLQVIDFSVIEADQTDLLGPPPQPVSSCSSEITADELSPSVLDQ 240
             S    N  +NS     +V+ +  +  ++TD         SS +S IT +  S    D 
Sbjct: 170 EES----NKVRNS-----KVVFYDFLAQNKTD-------SSSSAASGITHEHESDE-HDH 212

Query: 241 EETSA 245
           EE+S+
Sbjct: 213 EESSS 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
TAIR|locus:2179877	252	NAC083 "NAC domain containing	0.783	0.761	0.439	2.9e-39
TAIR|locus:2159073	206	NAC084 "NAC domain containing	0.673	0.800	0.472	3.7e-39
TAIR|locus:2051053	268	NAC041 "NAC domain containing	0.657	0.600	0.468	2.8e-34
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.636	0.428	0.408	1.3e-27
TAIR|locus:2095007	314	NAC058 "NAC domain containing	0.620	0.484	0.373	3.6e-27
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.755	0.578	0.335	1.2e-26
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.840	0.649	0.342	3.2e-26
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.877	0.743	0.333	5.2e-26
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.812	0.616	0.351	5.2e-26
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.640	0.620	0.405	6.6e-26

TAIR|locus:2179877 NAC083 "NAC domain containing protein 83" [Arabidopsis thaliana (taxid:3702)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 90/205 (43%), Positives = 125/205 (60%)

Query:     8 VVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMKEK 67
             V NG L+LP G+RF PTDEELVV YLKRKV   PLPASIIPE DV ++ P  LPG++ EK
Sbjct:     7 VKNGVLRLPPGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFDVCRADPWDLPGNL-EK 65

Query:    68 KRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKR 127
             +RYFFS    E+   N  +   A GSGYWK  G +++++ S   Q+VG++KTL+F +GK 
Sbjct:    66 ERYFFST--REAKYPNGNRSNRATGSGYWKATGIDKRVVTSRGNQIVGLKKTLVFYKGKP 123

Query:   128 GHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGVVSSNNL 187
              H ++T W+MH+Y L +         P   M    +WV+ RIF +K+   K      ++ 
Sbjct:   124 PHGSRTDWIMHEYRLSS--------SPPSSMGPTQNWVLCRIFLKKRAGNKNDDDDGDSR 175

Query:   188 NITKNSHKNQLQVIDFSVIEADQTD 212
             N+  N++ N    I+  +I  DQTD
Sbjct:   176 NLRHNNNNNSSDQIE--IITTDQTD 198

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010150 "leaf senescence" evidence=IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2159073 NAC084 "NAC domain containing protein 84" [Arabidopsis thaliana (taxid:3702)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 86/182 (47%), Positives = 115/182 (63%)

Query:     1 MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGL 60
             ME +   VVNGG+KLPIGYRF PT++EL++HYL  K F  PLP+SIIP  D+F SHPL  
Sbjct:     1 MEVEKRIVVNGGMKLPIGYRFHPTEQELILHYLLPKAFASPLPSSIIPVFDLFFSHPLSF 60

Query:    61 PGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTL 120
             PGD KEK+RYFF   R  S+  N+ + KI++G GYWKP+GK R I+A G  +  GIR+TL
Sbjct:    61 PGDQKEKQRYFFCKKREVSS--NEHRIKISSGDGYWKPIGKERPIIACG--KTFGIRRTL 116

Query:   121 IFCEGKRGHE--TKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRK-KKPK 177
              F E  +      KT+W M +Y L   A+            + G+W VY +++RK  K +
Sbjct:   117 AFYETNKSSSYCNKTRWSMTEYCLAGFASAK----------VSGEWAVYNVYERKGSKGR 166

Query:   178 KR 179
             K+
Sbjct:   167 KQ 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2051053 NAC041 "NAC domain containing protein 41" [Arabidopsis thaliana (taxid:3702)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 82/175 (46%), Positives = 113/175 (64%)

Query:     1 MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGL 60
             MEK+++    G L+LP G+RF PTDEELVV YL+RKV GLPLPAS+IPE DV +S P  L
Sbjct:     1 MEKRSSIKNRGVLRLPPGFRFHPTDEELVVQYLRRKVTGLPLPASVIPETDVCKSDPWDL 60

Query:    61 PGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQ-VVGIRKT 119
             PGD  E + YFFS    E+   N  +   + GSGYWK  G ++QI   G K+ VVG++KT
Sbjct:    61 PGDC-ESEMYFFST--REAKYPNGNRSNRSTGSGYWKATGLDKQI---GKKKLVVGMKKT 114

Query:   120 LIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKK 174
             L+F +GK  + T+T WV+H+Y LV    ++   Q +       +WV+ R+F +K+
Sbjct:   115 LVFYKGKPPNGTRTNWVLHEYRLVDSQQDSLYGQNM-------NWVLCRVFLKKR 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 67/164 (40%), Positives = 93/164 (56%)

Query:    15 LPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMK--EKKRYFF 72
             LP G+RF PTDEELVVHYLKRK    PLP +II E+D+++  P  LP      E++ YFF
Sbjct:    17 LPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFF 76

Query:    73 SNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETK 132
             S    +    N  +   AA SGYWK  G ++ +LAS   Q VG++K L+F  GK     K
Sbjct:    77 SP--RDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYSGKPPKGVK 134

Query:   133 TQWVMHQYHLVAIATNTNLTQPVF----KMVIIGDWVVYRIFQR 172
             + W+MH+Y L+    N       F      + + DWV+ RI+++
Sbjct:   135 SDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKK 178

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2095007 NAC058 "NAC domain containing protein 58" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
 Identities = 62/166 (37%), Positives = 91/166 (54%)

Query:    15 LPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPG--DMKEKKRYFF 72
             LP G+RF PTDEEL+ HYL RKV  +      + ++D+ +  P  LP    M EK+ YFF
Sbjct:     5 LPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKEWYFF 64

Query:    73 SNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETK 132
             S  + +       +   A  +GYWK  GK+++I  SG   +VG++KTL+F +G+     K
Sbjct:    65 S--QRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGV--LVGMKKTLVFYKGRAPKGEK 120

Query:   133 TQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKK 178
             + WVMH+Y L +        QP F      +WVV R+F++    KK
Sbjct:   121 SNWVMHEYRLES-------KQP-FNPTNKEEWVVCRVFEKSTAAKK 158

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 65/194 (33%), Positives = 109/194 (56%)

Query:    15 LPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMK--EKKRYFF 72
             LP G+RF PTDEELV+HYLKRK   +PLP +II ++D+++  P  LP      E++ YFF
Sbjct:    17 LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFF 76

Query:    73 SNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGT--KQVVGIRKTLIFCEGKRGHE 130
             S    +    N  +   AA SGYWK  G ++ ++++G    + VG++K L+F  GK    
Sbjct:    77 SP--RDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKG 134

Query:   131 TKTQWVMHQYHLVAIATNTNLTQPVFKM--VIIGDWVVYRIFQRKKKPKKRGVVSSNNLN 188
              K+ W+MH+Y L      T++     K   + + DWV+ RI+++      R     ++++
Sbjct:   135 VKSDWIMHEYRLTDNKP-THICDFGNKKNSLRLDDWVLCRIYKKNNSTASRHHHHLHHIH 193

Query:   189 ITKNSHKNQLQVID 202
             +  + H++ + + D
Sbjct:   194 LDNDHHRHDMMIDD 207

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 78/228 (34%), Positives = 115/228 (50%)

Query:    13 LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD--MKEKKRY 70
             L LP G+RF PTDEEL+V YL RK  G      +I E+D+++  P  LP      EK+ Y
Sbjct:    12 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWY 71

Query:    71 FFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHE 130
             FFS    +    N  +    AGSGYWK  G ++ I   G  Q VGI+K L+F  GK    
Sbjct:    72 FFSP--RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKAPKG 127

Query:   131 TKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKR----GVV---- 182
             TKT W+MH+Y L+  +     T+       + DWV+ RI++++   +K+    G+     
Sbjct:   128 TKTNWIMHEYRLIEPSRRNGSTK-------LDDWVLCRIYKKQSSAQKQVYDNGIANARE 180

Query:   183 -SSNNLNITKNSHKNQLQVIDFSVIEADQTDLLGPPPQPVSSCSSEIT 229
              S+N  + T +S  +   V+D    E D  +     P  +SS   ++T
Sbjct:   181 FSNNGTSSTTSSSSHFEDVLDSFHQEIDNRNFQFSNPNRISSLRPDLT 228

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 79/237 (33%), Positives = 119/237 (50%)

Query:    13 LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMK--EKKRY 70
             L+LP G+RF PTDEELV+HYL RK     +   II E+D+++  P  LPG     EK+ Y
Sbjct:     5 LQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWY 64

Query:    71 FFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHE 130
             FFS    +    N  +   +AGSGYWK  G ++ I   G  + VGI+K L+F  GK    
Sbjct:    65 FFSP--RDRKYPNGSRPNRSAGSGYWKATGADKPI---GLPKPVGIKKALVFYAGKAPKG 119

Query:   131 TKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRG----VVSSNN 186
              KT W+MH+Y L  +  +    +   ++    DWV+ RI+ +K   ++RG    VV  + 
Sbjct:   120 EKTNWIMHEYRLADVDRSVRKKKNSLRL---DDWVLCRIYNKKGATERRGPPPPVVYGDE 176

Query:   187 LNITKNSHKNQL------QVIDFSVIEADQTDLLGPPPQPVSSCSSEITADELSPSV 237
             +   K      +      Q  +F+    D +D +       SSCS ++ + E +  V
Sbjct:   177 IMEEKPKVTEMVMPPPPQQTSEFAYF--DTSDSVPKLHTTDSSCSEQVVSPEFTSEV 231

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 76/216 (35%), Positives = 114/216 (52%)

Query:     1 MEKQNNYVVNGGLK-LPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLG 59
             ME   +  +  G   LP G+RF PTDEELVVHYLK+K   +PLP SII E+D+++  P  
Sbjct:     1 MENMGDSSIGPGHPHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWE 60

Query:    60 LPGDMK--EKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIR 117
             LP      E + YFFS    +    N  +   AA SGYWK  G ++ I    + +V G++
Sbjct:    61 LPSKASFGEHEWYFFSP--RDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKV-GVK 117

Query:   118 KTLIFCEGKRGHETKTQWVMHQYHLV-----AIATNTNLTQPVFKMVIIGDWVVYRIFQR 172
             K L+F  GK     KT W+MH+Y L        A   +LT      + + DWV+ RI+++
Sbjct:   118 KALVFYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKK 177

Query:   173 K--KKPKKRGVVSSNNLN---ITKNS-HKNQLQVID 202
                ++P    V+   +L    ++K+S + +   V+D
Sbjct:   178 NSSQRPTMERVLLREDLMEGMLSKSSANSSSTSVLD 213

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 69/170 (40%), Positives = 96/170 (56%)

Query:    13 LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGDMK---EKKR 69
             L+ P G+RF PTDEELV+ YL RK    P+PA II ELD+++  P  LP DM    EK+ 
Sbjct:     8 LQFPPGFRFHPTDEELVLMYLCRKCASQPIPAPIITELDLYRYDPWDLP-DMALYGEKEW 66

Query:    70 YFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGH 129
             YFFS    +    N  +   AAG+GYWK  G ++ I   G  + VGI+K L+F  GK  +
Sbjct:    67 YFFSP--RDRKYPNGSRPNRAAGTGYWKATGADKPI---GRPKPVGIKKALVFYSGKPPN 121

Query:   130 ETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKR 179
               KT W+MH+Y L  +  +      +     + DWV+ RI+ +K   +KR
Sbjct:   122 GEKTNWIMHEYRLADVDRSVRKKNSLR----LDDWVLCRIYNKKGVIEKR 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: NAC114 NAC domain protein, IPR003441 (244 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	245
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	4e-48

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  154 bits (392), Expect = 4e-48
 Identities = 62/132 (46%), Positives = 85/132 (64%), Gaps = 7/132 (5%)

Query: 15  LPIGYRFRPTDEELVVHYLKRKVFGLPLPA-SIIPELDVFQSHPLGLPGDM---KEKKRY 70
           LP G+RF PTDEELVV+YLKRKV G PLP   +IPE+D+++  P  LP       +++ Y
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWY 60

Query: 71  FFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHE 130
           FFS    +    N  +   A GSGYWK  GK++ +L+ G  +VVG++KTL+F +G+    
Sbjct: 61  FFSPRDRKYP--NGSRTNRATGSGYWKATGKDKPVLSKG-GEVVGMKKTLVFYKGRAPKG 117

Query: 131 TKTQWVMHQYHL 142
            KT WVMH+Y L
Sbjct: 118 EKTDWVMHEYRL 129

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	245
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=1.1e-44  Score=291.29  Aligned_cols=126  Identities=44%  Similarity=0.896  Sum_probs=96.3

Q ss_pred             CCCCceecCChHHHHHHHHHHHHcCCCCCC-cceeccCCCCCCCCCCCCc--CCCCeEEEEeccccccccCCCCcccccc
Q 025990           15 LPIGYRFRPTDEELVVHYLKRKVFGLPLPA-SIIPELDVFQSHPLGLPGD--MKEKKRYFFSNIRNESAIDNDGKCKIAA   91 (245)
Q Consensus        15 LPpGfRF~PTDeELV~~YL~~K~~g~plp~-~~I~~~Dvy~~~PwdLp~~--~~~~~wYFFs~~~k~~k~~~g~R~~R~t   91 (245)
                      |||||||+|||+|||.+||++|+.|.++|. .+|+++|||++|||+|+..  .++++||||++  +..++.+++|.+|++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~--~~~~~~~~~r~~R~~   78 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSP--RKKKYPNGGRPNRVT   78 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE------------S-EEE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccCCCceEEEEEe--cccccCCcccccccc
Confidence            899999999999999999999999999988 8999999999999999942  45679999999  777788899999999


Q ss_pred             cceeeecCCCcceEEeCCCceEEEEEEEEEeecCcCCCCcccCeEEEEEEeC
Q 025990           92 GSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLV  143 (245)
Q Consensus        92 g~G~Wk~~g~~k~I~~~~~g~~vG~kktl~Fy~g~~~~g~rT~W~MhEY~l~  143 (245)
                      ++|+||++|+.++|... ++.+||+|++|+||.++.+++.+|+|+||||+|.
T Consensus        79 ~~G~Wk~~g~~~~i~~~-~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   79 GGGYWKSTGKEKPIKDP-GGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             TTEEEEEECEEEEEEE--TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             cceEEeecccccccccc-cceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            99999999999999843 8999999999999998888899999999999983

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	245
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		5e-25
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		5e-25
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		4e-23

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  110 bits (276), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 91/168 (54%), Gaps = 13/168 (7%)
Query: 13  LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD--MKEKKRY 70
           L LP G+RF PTDEEL+V YL RK  G      +I E+D+++  P  LP      EK+ Y
Sbjct: 18  LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWY 77
Query: 71  FFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHE 130
           FFS    +    N  +    AGSGYWK  G ++ I   G  Q VGI+K L+F  GK    
Sbjct: 78  FFSP--RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKAPKG 133
Query: 131 TKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKK 178
           TKT W+MH+Y L+  +     T+       + DWV+ RI++++   +K
Sbjct: 134 TKTNWIMHEYRLIEPSRRNGSTK-------LDDWVLCRIYKKQSSAQK 174

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  110 bits (276), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 91/168 (54%), Gaps = 13/168 (7%)
Query: 13  LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD--MKEKKRY 70
           L LP G+RF PTDEEL+V YL RK  G      +I E+D+++  P  LP      EK+ Y
Sbjct: 15  LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWY 74
Query: 71  FFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHE 130
           FFS    +    N  +    AGSGYWK  G ++ I   G  Q VGI+K L+F  GK    
Sbjct: 75  FFSP--RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKAPKG 130
Query: 131 TKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKK 178
           TKT W+MH+Y L+  +     T+       + DWV+ RI++++   +K
Sbjct: 131 TKTNWIMHEYRLIEPSRRNGSTK-------LDDWVLCRIYKKQSSAQK 171

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 8/168 (4%)
Query: 13  LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRY 70
           L LP G+RF PTD+ELV HYL RK  G  LP  II E+D+++  P  LP       ++ Y
Sbjct: 13  LNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWY 72
Query: 71  FFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHE 130
           FF+    +    N  +   AAG+GYWK  G ++ +   G  + +GI+K L+F  GK    
Sbjct: 73  FFTP--RDRKYPNGSRPNRAAGNGYWKATGADKPVAPRG--RTLGIKKALVFYAGKAPRG 128
Query: 131 TKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKK 178
            KT W+MH+Y L          +     + + DWV+ R++ +K + +K
Sbjct: 129 VKTDWIMHEYRLADAGRAAAGAK--KGSLRLDDWVLCRLYNKKNEWEK 174

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	245
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	3e-59
1ut7_A	171	No apical meristem protein; transcription regulati	2e-58

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  184 bits (468), Expect = 3e-59
 Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 8/180 (4%)

Query: 1   MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGL 60
           M  +        L LP G+RF PTD+ELV HYL RK  G  LP  II E+D+++  P  L
Sbjct: 1   MGMRRERDAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDL 60

Query: 61  PG--DMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRK 118
           P       ++ YFF+    +    N  +   AAG+GYWK  G ++ +   G  + +GI+K
Sbjct: 61  PERALFGAREWYFFT--PRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRG--RTLGIKK 116

Query: 119 TLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKK 178
            L+F  GK     KT W+MH+Y L          +     + + DWV+ R++ +K + +K
Sbjct: 117 ALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKK--GSLRLDDWVLCRLYNKKNEWEK 174

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  182 bits (464), Expect = 2e-58
 Identities = 65/168 (38%), Positives = 90/168 (53%), Gaps = 13/168 (7%)

Query: 13  LKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD--MKEKKRY 70
           L LP G+RF PTDEEL+V YL RK  G      +I E+D+++  P  LP      EK+ Y
Sbjct: 15  LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWY 74

Query: 71  FFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHE 130
           FFS    +    N  +    AGSGYWK  G ++ I   G  Q VGI+K L+F  GK    
Sbjct: 75  FFS--PRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKAPKG 130

Query: 131 TKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKK 178
           TKT W+MH+Y L+  +     T+         DWV+ RI++++   +K
Sbjct: 131 TKTNWIMHEYRLIEPSRRNGSTKL-------DDWVLCRIYKKQSSAQK 171

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	245
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=9e-59  Score=389.58  Aligned_cols=159  Identities=36%  Similarity=0.734  Sum_probs=133.4

Q ss_pred             CCccCCCCCceecCChHHHHHHHHHHHHcCCCCCCcceeccCCCCCCCCCCCCc--CCCCeEEEEeccccccccCCCCcc
Q 025990           10 NGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD--MKEKKRYFFSNIRNESAIDNDGKC   87 (245)
Q Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~plp~~~I~~~Dvy~~~PwdLp~~--~~~~~wYFFs~~~k~~k~~~g~R~   87 (245)
                      .+.+.|||||||+|||||||.|||++|+.|.++|..+|+++|||++|||+||+.  .++.+|||||+  +.+||++|.|.
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~--r~~ky~~g~R~   87 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTP--RDRKYPNGSRP   87 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEE--CCC-----CCS
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccCCceEEEEec--cccccCCCCCc
Confidence            345899999999999999999999999999999999999999999999999987  45689999999  78899999999


Q ss_pred             cccccceeeecCCCcceEEeCCCceEEEEEEEEEeecCcCCCCcccCeEEEEEEeCCcccCCCCCcccccceecccEEEE
Q 025990           88 KIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVY  167 (245)
Q Consensus        88 ~R~tg~G~Wk~~g~~k~I~~~~~g~~vG~kktl~Fy~g~~~~g~rT~W~MhEY~l~~~~~~~~~~~~~~~~~~~~~~VLC  167 (245)
                      +|+|++||||++|++++|.  .+|.+||+||+|+||.|++|++.+|+|+||||+|..........  .......++||||
T Consensus        88 nR~t~~G~WkatG~dk~I~--~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~--~~~~~~~~~wVlC  163 (174)
T 3ulx_A           88 NRAAGNGYWKATGADKPVA--PRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGA--KKGSLRLDDWVLC  163 (174)
T ss_dssp             CEEETTEEEEECSCCEEEC--CSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-------------CCSSEEEE
T ss_pred             eeecCCceEccCCCCcEEe--eCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCccccc--ccCCCCCCCEEEE
Confidence            9999999999999999998  45899999999999999999999999999999998875432100  0001256899999


Q ss_pred             EEEEcCC
Q 025990          168 RIFQRKK  174 (245)
Q Consensus       168 rI~~k~r  174 (245)
                      |||+|+.
T Consensus       164 rvf~K~~  170 (174)
T 3ulx_A          164 RLYNKKN  170 (174)
T ss_dssp             EEEESCC
T ss_pred             EEEEcCC
Confidence            9999874

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=8.6e-59  Score=389.15  Aligned_cols=165  Identities=39%  Similarity=0.699  Sum_probs=132.0

Q ss_pred             CccccccccCCccCCCCCceecCChHHHHHHHHHHHHcCCCCCCcceeccCCCCCCCCCCCCc--CCCCeEEEEeccccc
Q 025990            1 MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD--MKEKKRYFFSNIRNE   78 (245)
Q Consensus         1 m~~~~~~~~~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~plp~~~I~~~Dvy~~~PwdLp~~--~~~~~wYFFs~~~k~   78 (245)
                      |+.. +.-...++.|||||||+|||||||.|||++|+.|.++|..+|+++|||.+|||+||+.  .++.+|||||+  +.
T Consensus         4 m~~~-~~~~~~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~--r~   80 (171)
T 1ut7_A            4 MGIQ-ETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP--RD   80 (171)
T ss_dssp             CCCC-----CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEE--CC
T ss_pred             cccc-cCCcccccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcCCccEEEEec--cc
Confidence            5544 2223456899999999999999999999999999999999999999999999999986  45689999999  78


Q ss_pred             cccCCCCcccccccceeeecCCCcceEEeCCCceEEEEEEEEEeecCcCCCCcccCeEEEEEEeCCcccCCCCCcccccc
Q 025990           79 SAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKM  158 (245)
Q Consensus        79 ~k~~~g~R~~R~tg~G~Wk~~g~~k~I~~~~~g~~vG~kktl~Fy~g~~~~g~rT~W~MhEY~l~~~~~~~~~~~~~~~~  158 (245)
                      +||++|.|.+|+|++||||++|++++|.  .++.+||+||+|+||.|++|++.+|+|+||||+|........       .
T Consensus        81 ~k~~~g~R~~R~t~~G~Wk~tG~~k~I~--~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~-------~  151 (171)
T 1ut7_A           81 RKYPNGSRPNRVAGSGYWKATGTDKIIS--TEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNG-------S  151 (171)
T ss_dssp             C-------CCEEETTEEEEEEEEEEEEE--ETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC------------
T ss_pred             cccCCCCcccccCCCCEEeccCCCceEE--ecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccC-------c
Confidence            8999999999999999999999999998  456999999999999999999999999999999988652211       1


Q ss_pred             eecccEEEEEEEEcCCCCC
Q 025990          159 VIIGDWVVYRIFQRKKKPK  177 (245)
Q Consensus       159 ~~~~~~VLCrI~~k~r~~~  177 (245)
                      ...++|||||||+|++..+
T Consensus       152 ~~~~~~VlCrv~~k~~~~~  170 (171)
T 1ut7_A          152 TKLDDWVLCRIYKKQSSAQ  170 (171)
T ss_dssp             ---CCEEEEEEEECC----
T ss_pred             ccCCCEEEEEEEEcCCCCC
Confidence            2578999999999987643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	245
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	7e-50

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  159 bits (402), Expect = 7e-50
 Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 10/173 (5%)

Query: 1   MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGL 60
           M  Q    +   L LP G+RF PTDEEL+V YL RK  G      +I E+D+++  P  L
Sbjct: 4   MGIQETDPL-TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVL 62

Query: 61  PGDMKEKKRYFFSNIRNESAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTL 120
           P      ++ ++     +    N  +    AGSGYWK  G ++ I   G  Q VGI+K L
Sbjct: 63  PNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKAL 120

Query: 121 IFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRK 173
           +F  GK    TKT W+MH+Y L+  +     T+       + DWV+ RI++++
Sbjct: 121 VFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTK-------LDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	245
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.9e-56  Score=371.53  Aligned_cols=161  Identities=40%  Similarity=0.710  Sum_probs=132.0

Q ss_pred             CccccccccCCccCCCCCceecCChHHHHHHHHHHHHcCCCCCCcceeccCCCCCCCCCCCCc--CCCCeEEEEeccccc
Q 025990            1 MEKQNNYVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLPGD--MKEKKRYFFSNIRNE   78 (245)
Q Consensus         1 m~~~~~~~~~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~plp~~~I~~~Dvy~~~PwdLp~~--~~~~~wYFFs~~~k~   78 (245)
                      |+.+ +.-...+++|||||||+|||||||.|||++|+.|.|+|..+|+++|||++|||+||+.  .++++||||++  +.
T Consensus         4 ~~~~-~~~~~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~--~~   80 (166)
T d1ut7a_           4 MGIQ-ETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP--RD   80 (166)
T ss_dssp             CCCC-----CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEE--CC
T ss_pred             cccc-ccCccccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccCcceEEEEee--ec
Confidence            6777 5555567899999999999999999999999999999999999999999999999986  35689999999  77


Q ss_pred             cccCCCCcccccccceeeecCCCcceEEeCCCceEEEEEEEEEeecCcCCCCcccCeEEEEEEeCCcccCCCCCcccccc
Q 025990           79 SAIDNDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKM  158 (245)
Q Consensus        79 ~k~~~g~R~~R~tg~G~Wk~~g~~k~I~~~~~g~~vG~kktl~Fy~g~~~~g~rT~W~MhEY~l~~~~~~~~~~~~~~~~  158 (245)
                      .++++|.|.+|++++|+||++|+++.|.  .+|.+||+|++|+||+++.+++.+|+|+||||+|.+.......       
T Consensus        81 ~k~~~g~r~~R~~g~G~Wk~~g~~~~i~--~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~-------  151 (166)
T d1ut7a_          81 RKYPNGSRPNRVAGSGYWKATGTDKIIS--TEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGS-------  151 (166)
T ss_dssp             C-------CCEEETTEEEEEEEEEEEEE--ETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC------------
T ss_pred             cccCCCCccccccCCCEecccCCCceEe--cCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCc-------
Confidence            7889999999999999999999999988  5789999999999999999999999999999999886543211       


Q ss_pred             eecccEEEEEEEEcC
Q 025990          159 VIIGDWVVYRIFQRK  173 (245)
Q Consensus       159 ~~~~~~VLCrI~~k~  173 (245)
                      ...++|||||||+|+
T Consensus       152 ~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         152 TKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             ---CCEEEEEEEECC
T ss_pred             cccCCEEEEEEEecC
Confidence            256799999999985