Citrus Sinensis ID: 026001


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
MAIHTCSSVSLLIMLFSLGIVATTATVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDASGTGKCTTGDCGGVLKCTGGGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTDSGSVVACKSACAAFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCSGSDYLITFCPS
ccccHHHHHHHHHHHHHHHHHccccEEEEEEccccccEEcEEEcccccccccccccccccccEEEEEcccccccEEEcccccccccccccccccccccccEEccccccccccEEEEEEccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccEEEccccccccccccHHHHHHHHHcccccEEEccccccccEEEccccEEEEEccc
ccHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccEEccEcccccccccccccEEcccccEEEEEccccccEEEEEEEEEEEccccEEEEEEcccccEccccccccccccEEEEEEccccccccEEEEEEEccccccEEEEEcccccccccccccccccHHccHHHEEcccccEEEEccHHHHHccccccccccccccccccccHHHHHHHHHccccEcccccHHHHcEEcccccEEEEEccc
MAIHTCSSVSLLIMLFSLGIVATTATVFTlenhcsytvwpgtlcgngvatlgdggfalptgasvqfpvpaawsgriwgrtgcnfdasgtgkcttgdcggvlkctgggappvsLVEFTiannpnekdfydvslvdgyniglgvkavggkgdcqyagcvadlngncpaelqvtdsgsvVACKSAcaafntpefcctgdhatpdtcsptqysqlfkhacptaysyayddasstctcsgsdylitfcps
MAIHTCSSVSLLIMLFSLGIVATTATVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDASGTGKCTTGDCGGVLKCTGGGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTDSGSVVACKSACAAFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCSGSDYLITFCPS
MAIHTCSSVSLLIMLFSLGIVATTATVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDASgtgkcttgdcggVLKCTGGGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTDSGSVVACKSACAAFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCSGSDYLITFCPS
***HTCSSVSLLIMLFSLGIVATTATVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDASGTGKCTTGDCGGVLKCTGGGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTDSGSVVACKSACAAFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCSGSDYLITFC**
******S*VSLLIMLFSLGIVATTATVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDASGTGKCTTGDCGGVLKCTGGGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTDSGSVVACKSACAAFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCSGSDYLITFCPS
MAIHTCSSVSLLIMLFSLGIVATTATVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDASGTGKCTTGDCGGVLKCTGGGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTDSGSVVACKSACAAFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCSGSDYLITFCPS
*AIHTCSSVSLLIMLFSLGIVATTATVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDASGTGKCTTGDCGGVLKCTGGGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTDSGSVVACKSACAAFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCSGSDYLITFCPS
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAIHTCSSVSLLIMLFSLGIVATTATVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDASGTGKCTTGDCGGVLKCTGGGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTDSGSVVACKSACAAFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCSGSDYLITFCPS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query245 2.2.26 [Sep-21-2011]
P28493239 Pathogenesis-related prot no no 0.959 0.983 0.613 1e-79
P50699243 Thaumatin-like protein OS no no 0.889 0.897 0.535 3e-64
P83332246 Thaumatin-like protein 1 N/A no 0.942 0.939 0.554 3e-62
Q9FSG7246 Thaumatin-like protein 1a N/A no 0.942 0.939 0.512 2e-58
O80327244 Thaumatin-like protein 1 N/A no 0.946 0.950 0.540 2e-58
P50694245 Glucan endo-1,3-beta-gluc N/A no 0.951 0.951 0.504 1e-57
Q9SMH2243 Thaumatin-like protein 1 N/A no 0.971 0.979 0.512 2e-57
P83336212 Thaumatin-like protein 1b N/A no 0.844 0.976 0.537 4e-55
Q53MB8253 Thaumatin-like protein OS no no 0.955 0.924 0.481 4e-54
P83335242 Thaumatin-like protein 2 N/A no 0.881 0.892 0.5 7e-52
>sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 Back     alignment and function desciption
 Score =  296 bits (757), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 146/238 (61%), Positives = 175/238 (73%), Gaps = 3/238 (1%)

Query: 7   SSVSLLIMLFSLGIVATTATVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQF 66
           SS+ +L ++F    +A  AT FTL N+C  TVW GTL G G   LGDGGF L  GAS Q 
Sbjct: 5   SSIHILFLVFITSGIAVMATDFTLRNNCPTTVWAGTLAGQG-PKLGDGGFELTPGASRQL 63

Query: 67  PVPAAWSGRIWGRTGCNFDASGTGKCTTGDCGGVLKCTGGGAPPVSLVEFTIANNPNEKD 126
             PA WSGR W RTGCNFDASG G+C TGDCGG L+C GGG PPV+L EFT+  +   KD
Sbjct: 64  TAPAGWSGRFWARTGCNFDASGNGRCVTGDCGG-LRCNGGGVPPVTLAEFTLVGD-GGKD 121

Query: 127 FYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTDSGSVVACKSACAAF 186
           FYDVSLVDGYN+ LG++  GG GDC+YAGCV+DLN  CP  L+V D  +VVACKSAC  F
Sbjct: 122 FYDVSLVDGYNVKLGIRPSGGSGDCKYAGCVSDLNAACPDMLKVMDQNNVVACKSACERF 181

Query: 187 NTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCSGSDYLITFCP 244
           NT ++CC G +  P+TC PT YS++FK+ACP AYSYAYDD +ST TC+G++Y ITFCP
Sbjct: 182 NTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTGANYEITFCP 239




Partially responsible for acquired pathogen resistance.
Arabidopsis thaliana (taxid: 3702)
>sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 Back     alignment and function description
>sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P50694|TLP_PRUAV Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 Back     alignment and function description
>sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 Back     alignment and function description
>sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 Back     alignment and function description
>sp|P83335|TLP2_PRUPE Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query245
224137238247 predicted protein [Populus trichocarpa] 0.995 0.987 0.783 1e-103
255538550257 Zeamatin precursor, putative [Ricinus co 0.991 0.945 0.753 1e-102
449470156260 PREDICTED: pathogenesis-related protein 0.902 0.85 0.764 3e-97
359744028249 thaumatin-like protein 1 [Prunus persica 0.897 0.883 0.782 9e-97
225458384243 PREDICTED: pathogenesis-related protein 0.918 0.925 0.730 8e-95
147812057243 hypothetical protein VITISV_007440 [Viti 0.918 0.925 0.725 3e-94
6273385243 SCUTL2 [Vitis vinifera] 0.914 0.921 0.728 5e-94
356553901236 PREDICTED: pathogenesis-related protein 0.902 0.936 0.766 7e-94
356562325233 PREDICTED: pathogenesis-related protein 0.893 0.939 0.760 2e-92
119657126244 TLP1 [Gossypium barbadense] 0.918 0.922 0.740 1e-91
>gi|224137238|ref|XP_002327076.1| predicted protein [Populus trichocarpa] gi|222835391|gb|EEE73826.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/245 (78%), Positives = 207/245 (84%), Gaps = 1/245 (0%)

Query: 1   MAIHTCSSVSLLIMLFSLGIVATTATVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPT 60
           MAI + S   LL++LF  G V   ATVFTL+N CSYT+WPGTL GNG ATLGDGGF L  
Sbjct: 1   MAISSISLCYLLLLLFVTGNVGN-ATVFTLQNQCSYTLWPGTLSGNGAATLGDGGFTLAP 59

Query: 61  GASVQFPVPAAWSGRIWGRTGCNFDASGTGKCTTGDCGGVLKCTGGGAPPVSLVEFTIAN 120
           GAS+QF  P  WSGR W RTGC FD SG+GKC TGDCGG L C GGGAPPVSLVEFTI  
Sbjct: 60  GASIQFQAPPGWSGRFWARTGCVFDESGSGKCVTGDCGGTLNCIGGGAPPVSLVEFTIGT 119

Query: 121 NPNEKDFYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTDSGSVVACK 180
           NPN+KDFYDVSLVDGYN+GLGVKA+GG GDCQYAGCV+DLNGNCPAEL+V DSGS VACK
Sbjct: 120 NPNDKDFYDVSLVDGYNVGLGVKALGGYGDCQYAGCVSDLNGNCPAELRVVDSGSTVACK 179

Query: 181 SACAAFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCSGSDYLI 240
           SACAAFN PEFCCT DHATP TCSPTQYS +FK+ACPTAYSYAYDDASSTCTC+GSDYLI
Sbjct: 180 SACAAFNAPEFCCTADHATPQTCSPTQYSVMFKNACPTAYSYAYDDASSTCTCTGSDYLI 239

Query: 241 TFCPS 245
           TFCPS
Sbjct: 240 TFCPS 244




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538550|ref|XP_002510340.1| Zeamatin precursor, putative [Ricinus communis] gi|223551041|gb|EEF52527.1| Zeamatin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449470156|ref|XP_004152784.1| PREDICTED: pathogenesis-related protein 5-like [Cucumis sativus] gi|449496142|ref|XP_004160053.1| PREDICTED: pathogenesis-related protein 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359744028|gb|AEV57470.1| thaumatin-like protein 1 [Prunus persica] Back     alignment and taxonomy information
>gi|225458384|ref|XP_002283480.1| PREDICTED: pathogenesis-related protein 5 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147812057|emb|CAN70296.1| hypothetical protein VITISV_007440 [Vitis vinifera] Back     alignment and taxonomy information
>gi|6273385|gb|AAF06347.1|AF195654_1 SCUTL2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356553901|ref|XP_003545289.1| PREDICTED: pathogenesis-related protein 5-like [Glycine max] Back     alignment and taxonomy information
>gi|356562325|ref|XP_003549422.1| PREDICTED: pathogenesis-related protein 5-like [Glycine max] Back     alignment and taxonomy information
>gi|119657126|gb|ABL86687.1| TLP1 [Gossypium barbadense] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query245
TAIR|locus:2027161246 TLP-3 "AT1G75030" [Arabidopsis 0.971 0.967 0.639 1.1e-85
TAIR|locus:2037227246 AT1G75050 "AT1G75050" [Arabido 0.967 0.963 0.632 1.3e-82
TAIR|locus:2037235239 PR5 "AT1G75040" [Arabidopsis t 0.959 0.983 0.575 1.1e-73
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.987 0.979 0.550 1.6e-72
TAIR|locus:2135129301 AT4G36010 "AT4G36010" [Arabido 0.967 0.787 0.544 3.5e-68
TAIR|locus:2827805253 AT2G17860 "AT2G17860" [Arabido 0.971 0.940 0.520 1.2e-63
TAIR|locus:2121189345 AT4G38660 "AT4G38660" [Arabido 0.942 0.669 0.510 1.6e-63
TAIR|locus:2135882260 TLP1 "AT4G24180" [Arabidopsis 0.979 0.923 0.486 6.2e-62
TAIR|locus:2153929 420 AT5G24620 [Arabidopsis thalian 0.963 0.561 0.485 6.2e-62
TAIR|locus:2203236356 AT1G77700 "AT1G77700" [Arabido 0.877 0.603 0.504 1.9e-60
TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
 Identities = 154/241 (63%), Positives = 184/241 (76%)

Query:     7 SSVSLLIMLFSLGIVATTATVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQF 66
             SS+ +L  +F    +A +ATVFTL+N C+YTVWPGTL GN + TLGDGGF L  GASVQ 
Sbjct:     5 SSIHILFFVFITSGIADSATVFTLQNSCAYTVWPGTLSGNSI-TLGDGGFPLTPGASVQL 63

Query:    67 PVPAAWSGRIWGRTGCNFDASXXXXXXXXXXXXVLKCTGGGAPPVSLVEFTIANNPNEKD 126
               P  WSGR W RTGCNFDAS            VLKCTGGG PP +L EFT+ ++    D
Sbjct:    64 TAPTGWSGRFWARTGCNFDASGHGTCVTGDCGGVLKCTGGGVPPATLAEFTVGSSNAGMD 123

Query:   127 FYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTD--SGSVVACKSACA 184
             FYDVSLVDGYN+ +G+K  GG G+C+YAGCV+D+N  CP+EL++ D  SGSV ACKSACA
Sbjct:   124 FYDVSLVDGYNVKMGIKPQGGFGNCKYAGCVSDINEICPSELRIMDPNSGSVAACKSACA 183

Query:   185 AFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCSGSDYLITFCP 244
             AF++PEFCCTG HATP TCSPT YS +FK+ACP+AYSYAYDDASST TC+GS+YLITFCP
Sbjct:   184 AFSSPEFCCTGAHATPQTCSPTYYSSMFKNACPSAYSYAYDDASSTFTCTGSNYLITFCP 243

Query:   245 S 245
             +
Sbjct:   244 T 244




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0051707 "response to other organism" evidence=ISS
TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037235 PR5 "AT1G75040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135129 AT4G36010 "AT4G36010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827805 AT2G17860 "AT2G17860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135882 TLP1 "AT4G24180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153929 AT5G24620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O80327TLP1_PYRPYNo assigned EC number0.54000.94690.9508N/Ano
P83332TLP1_PRUPENo assigned EC number0.55410.94280.9390N/Ano
P83336TP1B_MALDONo assigned EC number0.53770.84480.9764N/Ano
Q9SMH2TLP1_CASSANo assigned EC number0.51210.97140.9794N/Ano
Q9FSG7TP1A_MALDONo assigned EC number0.51250.94280.9390N/Ano
P50694TLP_PRUAV3, ., 2, ., 1, ., 3, 90.50410.95100.9510N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.40.444.1
hypothetical protein (221 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 1e-115
pfam00314212 pfam00314, Thaumatin, Thaumatin family 1e-110
smart00205218 smart00205, THN, Thaumatin family 1e-95
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 2e-44
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 6e-38
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 2e-36
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 6e-35
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 4e-05
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
 Score =  329 bits (845), Expect = e-115
 Identities = 136/220 (61%), Positives = 160/220 (72%), Gaps = 4/220 (1%)

Query: 27  VFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDA 86
            FT+ N C +TVWPG L   G   LG GGF L  G S     P+ WSGR WGRTGC+FD+
Sbjct: 1   TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDS 60

Query: 87  SGTGKCTTGDCGGVLKCTG-GGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAV 145
           SG G C TGDCGG L+C G GGAPP +L EFT+  +   +DFYDVSLVDGYN+ + +   
Sbjct: 61  SGKGSCATGDCGGGLECNGAGGAPPATLAEFTLGGS-GGQDFYDVSLVDGYNLPVSITPQ 119

Query: 146 GGKGDCQYAGCVADLNGNCPAELQVTDS-GSVVACKSACAAFNTPEFCCTGDHATPDTCS 204
           GG G C+ AGCVADLN  CPAELQV +S G VVACKSAC AFNT E+CC G + TP+TC 
Sbjct: 120 GGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLAFNTDEYCCRGAYGTPETCK 179

Query: 205 PTQYSQLFKHACPTAYSYAYDDASSTCTCS-GSDYLITFC 243
           PT YS+LFK+ACP AYSYAYDD +ST TCS G++Y+ITFC
Sbjct: 180 PTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219


This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219

>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 245
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 97.63
cd09216 353 GH64-LPHase-like glycoside hydrolase family 64: la 95.38
cd09220 369 GH64-GluB-like glycoside hydrolase family 64: beta 90.86
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
Probab=100.00  E-value=7e-86  Score=577.21  Aligned_cols=216  Identities=63%  Similarity=1.257  Sum_probs=208.3

Q ss_pred             EEEEEeCCCCcccceeecCCCccccCCCCeecCCCCeEEEecCCCCceeEEeeccccCCCCCCcCcccCCCCCccccCC-
Q 026001           27 VFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDASGTGKCTTGDCGGVLKCTG-  105 (245)
Q Consensus        27 t~ti~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~~p~~WsGriwaRtgCs~d~~g~~~C~TGdCgg~~~C~~-  105 (245)
                      +|||+|||+||||||+++++|++++..+||+|+||++++|++|++|+|||||||+|+||+.|++.|+||||+|.++|++ 
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g~   80 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCGGGLECNGA   80 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCCCeeecCCC
Confidence            5999999999999999999999999899999999999999999999999999999999999999999999999999998 


Q ss_pred             CCCCCcceEEEEeeCCCCCCceeeeecccccccCceecccCCCCCCccCCCcccccccCCccccccCCCC-ceecccccc
Q 026001          106 GGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTDSGS-VVACKSACA  184 (245)
Q Consensus       106 ~~~pp~TlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~g~~~C~~~~C~~dl~~~CP~~l~v~~~~g-vv~C~S~C~  184 (245)
                      ++.||+|||||+|++. +++|||||||||||||||+|+|+++.+.|+.++|.+|||+.||.|||+++.+| +|||||||+
T Consensus        81 ~g~pP~TlaEftl~~~-~~~d~YdvSlVdGfNlP~~i~P~~~~~~C~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC~  159 (219)
T cd09218          81 GGAPPATLAEFTLGGS-GGQDFYDVSLVDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACL  159 (219)
T ss_pred             CCCCCceeEEEEeccC-CCCcceeeeeeccccCCEEEEecCCCCCCCCCcccCcccccCCHHHeeccCCCcEeeecCHHH
Confidence            8889999999999876 68899999999999999999998776789999999999999999999997667 999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCchhhHHHHhhCCCccccccCCCCCceeec-CCCeEEEec
Q 026001          185 AFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCS-GSDYLITFC  243 (245)
Q Consensus       185 ~~~~~~~CC~g~~~~p~~C~~t~ys~~fK~~CP~AYsya~DD~ts~~tC~-~~~y~VtFC  243 (245)
                      +|++|||||+|+|++|++|+|+.|+++||++||+||+|||||++++|+|. +++|+||||
T Consensus       160 ~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         160 AFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             hhCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            99999999999999999999999999999999999999999999999998 699999998



This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele

>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information
>cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like Back     alignment and domain information
>cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 1e-52
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 1e-52
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 2e-36
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 8e-36
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 1e-35
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 4e-33
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 6e-32
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 3e-31
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 3e-31
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 3e-31
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 4e-31
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 4e-31
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 9e-31
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 9e-31
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 2e-29
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 1e-08
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure

Iteration: 1

Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 111/221 (50%), Positives = 142/221 (64%), Gaps = 5/221 (2%) Query: 28 FTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDAS 87 T N+C TVWPGTL G+ L GF L + AS P+ WSGR WGRT C+ DA+ Sbjct: 3 ITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDAA 62 Query: 88 XXXXXXXXX-XXXVLKCTGGGA-PPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAV 145 + C G GA PP +LVE TIA N +D+YDVSLVDG+N+ + V Sbjct: 63 GKFTCETADCGSGQVACNGAGAVPPATLVEITIAAN-GGQDYYDVSLVDGFNLPMSVAPQ 121 Query: 146 GGKGDCQYAGCVADLNGNCPAELQVTDS-GSVVACKSACAAFNTPEFCCTGDHATPDTCS 204 GG G+C+ + C A++N CPA LQV + GSV++CKSAC AF ++CCT + TP+TC Sbjct: 122 GGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCP 181 Query: 205 PTQYSQLFKHACPTAYSYAYDDASSTCTCS-GSDYLITFCP 244 PT+YS++F+ CP AYSYAYDD +ST TCS G DY+ITFCP Sbjct: 182 PTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 222
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 9e-67
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 2e-62
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 5e-59
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 1e-53
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 1e-52
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 2e-33
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
 Score =  205 bits (521), Expect = 9e-67
 Identities = 114/221 (51%), Positives = 138/221 (62%), Gaps = 5/221 (2%)

Query: 28  FTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDAS 87
            + +N+C Y VWPGTL  +    L   GF L + AS Q   P  W+GR W RTGC+ DAS
Sbjct: 3   ISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDAS 62

Query: 88  GTGKCTTGDCG-GVLKCTG-GGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAV 145
           G   C T DC  G + C G G  PP +L EF I      +DFYDVSLVDG+N+ + V   
Sbjct: 63  GKFVCATADCASGQVMCNGNGAIPPATLAEFNI-PAGGGQDFYDVSLVDGFNLPMSVTPQ 121

Query: 146 GGKGDCQYAGCVADLNGNCPAELQVTD-SGSVVACKSACAAFNTPEFCCTGDHATPDTCS 204
           GG GDC+ A C A++N  CP+ELQ     GSVVAC SAC  F TP++CCT    TP+TC 
Sbjct: 122 GGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCP 181

Query: 205 PTQYSQLFKHACPTAYSYAYDDASSTCTC-SGSDYLITFCP 244
           PT YS++F +ACP AYSYAYDD   T TC  G +Y ITFCP
Sbjct: 182 PTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222


>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query245
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A 367 Laminaripentaose-producing beta-1,3-guluase (lphas 94.12
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
Probab=100.00  E-value=1.4e-89  Score=600.60  Aligned_cols=218  Identities=52%  Similarity=1.076  Sum_probs=210.8

Q ss_pred             eEEEEEeCCCCcccceeecCCCccccCCCCeecCCCCeEEEecCCCCceeEEeeccccCCCCCCcCcccCCCC-CccccC
Q 026001           26 TVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAWSGRIWGRTGCNFDASGTGKCTTGDCG-GVLKCT  104 (245)
Q Consensus        26 ~t~ti~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~~p~~WsGriwaRtgCs~d~~g~~~C~TGdCg-g~~~C~  104 (245)
                      ++|||+|+|+|||||++++++|++++.++||+|++|+++++.+|++|+|||||||+|+||+.|+++|+||||+ |.++|+
T Consensus         1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~   80 (222)
T 2ahn_A            1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCN   80 (222)
T ss_dssp             CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCT
T ss_pred             CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecC
Confidence            5899999999999999999999999999999999999999999999999999999999999999999999999 999999


Q ss_pred             C-CCCCCcceEEEEeeCCCCCCceeeeecccccccCceecccCCCCCCccCCCcccccccCCccccccCCCC-ceecccc
Q 026001          105 G-GGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAVGGKGDCQYAGCVADLNGNCPAELQVTDSGS-VVACKSA  182 (245)
Q Consensus       105 ~-~~~pp~TlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~g~~~C~~~~C~~dl~~~CP~~l~v~~~~g-vv~C~S~  182 (245)
                      + ++.||+|||||+|++. +++|||||||||||||||+|+|+++++.|+.++|.+|||..||.|||+++.+| +|||||+
T Consensus        81 g~~g~pPaTLaEftl~~~-~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~sa  159 (222)
T 2ahn_A           81 GNGAIPPATLAEFNIPAG-GGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSA  159 (222)
T ss_dssp             TCCCCSSCCEEEEEECST-TCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECCH
T ss_pred             CCCCCCCceeeeEEecCC-CCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEeccccc
Confidence            9 8999999999999986 68999999999999999999999876789999999999999999999987677 9999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCchhhHHHHhhCCCccccccCCCCCceeec-CCCeEEEecC
Q 026001          183 CAAFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCS-GSDYLITFCP  244 (245)
Q Consensus       183 C~~~~~~~~CC~g~~~~p~~C~~t~ys~~fK~~CP~AYsya~DD~ts~~tC~-~~~y~VtFCP  244 (245)
                      |++|++|||||+|+|++|++|+|++|+++||++||+||+|||||++|+|+|+ +++|+|||||
T Consensus       160 C~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP  222 (222)
T 2ahn_A          160 CVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP  222 (222)
T ss_dssp             HHHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred             ccccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence            9999999999999999999999999999999999999999999999999998 5699999998



>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 245
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 3e-76
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 2e-75
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 1e-73
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Zeamatin
species: Maize (Zea mays) [TaxId: 4577]
 Score =  227 bits (580), Expect = 3e-76
 Identities = 97/220 (44%), Positives = 126/220 (57%), Gaps = 17/220 (7%)

Query: 27  VFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAA-WSGRIWGRTGCNFD 85
           VFT+ N C +TVW  ++   G       G  L  G S +   PA   + RIW RTGC FD
Sbjct: 2   VFTVVNQCPFTVWAASVPVGG-------GRQLNRGESWRITAPAGTTAARIWARTGCKFD 54

Query: 86  ASGTGKCTTGDCGGVLKCTGGGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAV 145
           ASG G C TGDCGGVL+CTG G  P +L E+ +    N  DF+D+SL+DG+N+ +     
Sbjct: 55  ASGRGSCRTGDCGGVLQCTGYGRAPNTLAEYAL-KQFNNLDFFDISLIDGFNVPMSFLPD 113

Query: 146 GGKGDCQYAGCVADLNGNCPAELQVTDSGSVVACKSACAAFNTPEFCCTGDHATPDTCSP 205
           GG G  +   C  D+N  CPAEL+         C +AC  F   E+CC G  +  + C P
Sbjct: 114 GGSGCSRGPRCAVDVNARCPAELRQD-----GVCNNACPVFKKDEYCCVG--SAANDCHP 166

Query: 206 TQYSQLFKHACPTAYSYAYDDASSTCTC-SGSDYLITFCP 244
           T YS+ FK  CP AYSY  DDA+ST TC +G++Y + FCP
Sbjct: 167 TNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206


>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query245
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00  E-value=1.3e-80  Score=537.20  Aligned_cols=203  Identities=45%  Similarity=0.983  Sum_probs=190.7

Q ss_pred             ceEEEEEeCCCCcccceeecCCCccccCCCCeecCCCCeEEEecCCCC-ceeEEeeccccCCCCCCcCcccCCCCCcccc
Q 026001           25 ATVFTLENHCSYTVWPGTLCGNGVATLGDGGFALPTGASVQFPVPAAW-SGRIWGRTGCNFDASGTGKCTTGDCGGVLKC  103 (245)
Q Consensus        25 ~~t~ti~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~~p~~W-sGriwaRtgCs~d~~g~~~C~TGdCgg~~~C  103 (245)
                      +++|||+|||+|||||+++++       .+|++|++|+++++.+|++| +|||||||+|+||+.|++.|+||||+|.++|
T Consensus         1 ~~~fti~N~C~~TVWp~~~p~-------~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCgg~l~C   73 (208)
T d1auna_           1 SGVFEVHNNCPYTVWAAATPV-------GGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLEC   73 (208)
T ss_dssp             CCEEEEEECSSSCEEEEEETT-------TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSC
T ss_pred             CCEEEEEeCCCCCcccccccC-------CCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcCCeEec
Confidence            368999999999999999863       46999999999999999998 5999999999999999999999999999999


Q ss_pred             CCCCCCCcceEEEEeeCCCCCCceeeeecccccccCceecccC-CCCCCccCCCcccccccCCccccccCCCCceecccc
Q 026001          104 TGGGAPPVSLVEFTIANNPNEKDFYDVSLVDGYNIGLGVKAVG-GKGDCQYAGCVADLNGNCPAELQVTDSGSVVACKSA  182 (245)
Q Consensus       104 ~~~~~pp~TlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~-g~~~C~~~~C~~dl~~~CP~~l~v~~~~gvv~C~S~  182 (245)
                      ++.+.||+|||||+|+.. +++|||||||||||||||+|+|.+ +++.|+.++|.+|||..||.|||+++     ||||+
T Consensus        74 ~~~G~pP~TlaEftl~~~-~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~~-----~C~sa  147 (208)
T d1auna_          74 KGWGKPPNTLAEYALNQF-SNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG-----GCNNP  147 (208)
T ss_dssp             SSCCCSSCCEEEEEEEEG-GGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETT-----EECCH
T ss_pred             CCCCCCCcceEEEEeccC-CCcceeccccccccccceEEeccCCCCCCcCcccccCCccccCCHhhccCC-----CCccc
Confidence            997789999999999986 789999999999999999999987 45689999999999999999999975     89999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCchhhHHHHhhCCCccccccCCCCCceeecC--CCeEEEecCC
Q 026001          183 CAAFNTPEFCCTGDHATPDTCSPTQYSQLFKHACPTAYSYAYDDASSTCTCSG--SDYLITFCPS  245 (245)
Q Consensus       183 C~~~~~~~~CC~g~~~~p~~C~~t~ys~~fK~~CP~AYsya~DD~ts~~tC~~--~~y~VtFCP~  245 (245)
                      |.+|++|||||+     +++|+|++|+++||++||+||+|||||++|+|+|++  ++|+|||||+
T Consensus       148 C~~~~~~~~CCt-----~~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP~  207 (208)
T d1auna_         148 CTTFGGQQYCCT-----QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPY  207 (208)
T ss_dssp             HHHTCSHHHHCT-----TSCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTT
T ss_pred             eeecCCCccccC-----CCcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCCC
Confidence            999999999997     478999999999999999999999999999999974  7999999995



>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure