Citrus Sinensis ID: 026037

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
MMNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP
ccHHHHHHHHHHHHHHHcEEEEEEEEEEcccccEEcEEEccccccccccccEEEccccEEEEEcccccccccccccccccccccccccccccccccccEEccccccccccEEEEEEEccccccEEEEccccccccccEEEccccccccccccccccccccccccccccccccccEEccccHHHHcccccccccccccccccccccHHHHHHHHHcccccccccccccccEEccccccEEEEEcc
ccHHHHHHHHHHHHHHHccccEEEEEEccccccEcccccccccccccccccEEcccccEEEEEcccccccEEEEEccccccccccEEEEcccccccEEEEccccccccccEEEEEEEEHHHEEEEEEEccccEcccEEEEEcccccccccccccEEcccHHccHHcEEccccccEEEEccHHHHHccccccccccccccccccccHHHHHHHHHccccEcccccHHHHcEEEEccccEEEEEcc
MMNTRAIFCLTFSFLISGAHLATITftnncqntiwpgaltadggaqlsENGFELASKAKktldvpspwkgrfwartqcsrdssgkftcatadcgsgqvtcngngaappaslVEFTIaadkgqdffdlslvdgfnlplsvapqggsgatcttssckanvnavcpselavkgsdgnvIACKSAcaafnepqycctgafnkpetcpptkyskifkdqcpqaysyayddrtstfsctggpnyditfcp
MMNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKakktldvpspwkgrfWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDdrtstfsctggpnyditfcp
MMNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP
****RAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLS**GFEL******TLDVPSPWKGRFWARTQCSRD*SGKFTCATADCG******************EFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITF**
**NTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP
MMNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAP**********SSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP
*MNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query244 2.2.26 [Sep-21-2011]
Q9SMH2243 Thaumatin-like protein 1 N/A no 0.991 0.995 0.689 5e-95
Q9FSG7246 Thaumatin-like protein 1a N/A no 0.995 0.987 0.672 7e-94
P83332246 Thaumatin-like protein 1 N/A no 0.995 0.987 0.668 3e-92
P50694245 Glucan endo-1,3-beta-gluc N/A no 0.991 0.987 0.663 6e-90
O80327244 Thaumatin-like protein 1 N/A no 0.991 0.991 0.644 3e-87
P83336212 Thaumatin-like protein 1b N/A no 0.868 1.0 0.680 8e-84
P83335242 Thaumatin-like protein 2 N/A no 0.913 0.921 0.647 2e-81
P28493239 Pathogenesis-related prot no no 0.971 0.991 0.532 3e-66
P50699243 Thaumatin-like protein OS no no 0.913 0.917 0.493 5e-59
Q53MB8253 Thaumatin-like protein OS no no 0.987 0.952 0.432 4e-48
>sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 Back     alignment and function desciption
 Score =  347 bits (889), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 169/245 (68%), Positives = 198/245 (80%), Gaps = 3/245 (1%)

Query: 1   MMNTRAIFCLTFS-FLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAK 59
           MM T A++ LT + F +SGAH A ITFTNNC  TIWPG LT+D   QL   GF LASKA 
Sbjct: 1   MMKTLALYGLTLALFFLSGAHSAKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKAS 60

Query: 60  KTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAAD 119
            TL V +PWKGRFWART+C+ +S GKFTC TADC +GQV CNGNGA PPASLVE  IAA+
Sbjct: 61  LTLGVQAPWKGRFWARTRCTTNS-GKFTCETADCSTGQVACNGNGAIPPASLVEINIAAN 119

Query: 120 KGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACK 179
           +G DF+D+SLVDG+NLP+SVA +GG+G  C  +SC+ANVNAVCP+EL VKGSD +V+ACK
Sbjct: 120 RGMDFYDVSLVDGYNLPVSVATRGGTG-DCKATSCRANVNAVCPAELQVKGSDASVLACK 178

Query: 180 SACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYD 239
           SAC AFN+PQYCCTGAF+   TCP TKYS+IFK QCPQAYSYAYDD TSTF+C+G P+Y 
Sbjct: 179 SACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYV 238

Query: 240 ITFCP 244
           ITFCP
Sbjct: 239 ITFCP 243
Possesses antifungal activity.
Castanea sativa (taxid: 21020)
>sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|P50694|TLP_PRUAV Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 Back     alignment and function description
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|P83335|TLP2_PRUPE Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 Back     alignment and function description
>sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 Back     alignment and function description
>sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query244
25091419243 RecName: Full=Thaumatin-like protein 1; 0.991 0.995 0.689 3e-93
11399248247 thaumatin-like protein 1 - apple tree 0.959 0.947 0.693 3e-92
3643249245 thaumatin-like protein precursor Mdtl1 [ 0.959 0.955 0.693 4e-92
30316292246 RecName: Full=Thaumatin-like protein 1a; 0.995 0.987 0.672 4e-92
359744030246 thaumatin-like protein 2 [Prunus persica 0.995 0.987 0.676 4e-92
190613905246 putative allergen Pru du 2.01A [Prunus d 0.995 0.987 0.676 4e-92
83853953246 pathogenesis-related protein 5 [Malus x 0.995 0.987 0.668 9e-92
60418844246 thaumatin-like protein precursor [Malus 0.995 0.987 0.668 9e-92
60418840246 thaumatin-like protein precursor [Malus 0.995 0.987 0.663 2e-91
190613907246 putative allergen Pru p 2.01A [Prunus du 0.995 0.987 0.672 2e-91
>gi|25091419|sp|Q9SMH2.1|TLP1_CASSA RecName: Full=Thaumatin-like protein 1; Flags: Precursor gi|6523187|emb|CAB62167.1| thaumatin-like protein [Castanea sativa] Back     alignment and taxonomy information
 Score =  347 bits (889), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 169/245 (68%), Positives = 198/245 (80%), Gaps = 3/245 (1%)

Query: 1   MMNTRAIFCLTFS-FLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAK 59
           MM T A++ LT + F +SGAH A ITFTNNC  TIWPG LT+D   QL   GF LASKA 
Sbjct: 1   MMKTLALYGLTLALFFLSGAHSAKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKAS 60

Query: 60  KTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAAD 119
            TL V +PWKGRFWART+C+ +S GKFTC TADC +GQV CNGNGA PPASLVE  IAA+
Sbjct: 61  LTLGVQAPWKGRFWARTRCTTNS-GKFTCETADCSTGQVACNGNGAIPPASLVEINIAAN 119

Query: 120 KGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACK 179
           +G DF+D+SLVDG+NLP+SVA +GG+G  C  +SC+ANVNAVCP+EL VKGSD +V+ACK
Sbjct: 120 RGMDFYDVSLVDGYNLPVSVATRGGTG-DCKATSCRANVNAVCPAELQVKGSDASVLACK 178

Query: 180 SACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYD 239
           SAC AFN+PQYCCTGAF+   TCP TKYS+IFK QCPQAYSYAYDD TSTF+C+G P+Y 
Sbjct: 179 SACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYV 238

Query: 240 ITFCP 244
           ITFCP
Sbjct: 239 ITFCP 243

Source: Castanea sativa

Species: Castanea sativa

Genus: Castanea

Family: Fagaceae

Order: Fagales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|11399248|pir||JC7201 thaumatin-like protein 1 - apple tree Back     alignment and taxonomy information
>gi|3643249|gb|AAC36740.1| thaumatin-like protein precursor Mdtl1 [Malus x domestica] Back     alignment and taxonomy information
>gi|30316292|sp|Q9FSG7.1|TP1A_MALDO RecName: Full=Thaumatin-like protein 1a; AltName: Full=Mdtl1; AltName: Full=Pathogenesis-related protein 5a; Short=PR-5a; AltName: Allergen=Mal d 2; Flags: Precursor gi|10334651|emb|CAC10270.1| thaumatin-like protein [Malus x domestica] gi|60418836|gb|AAX19845.1| thaumatin-like protein precursor [Malus x domestica] gi|60418838|gb|AAX19846.1| thaumatin-like protein precursor [Malus x domestica] Back     alignment and taxonomy information
>gi|359744030|gb|AEV57471.1| thaumatin-like protein 2 [Prunus persica] Back     alignment and taxonomy information
>gi|190613905|gb|ACE80956.1| putative allergen Pru du 2.01A [Prunus dulcis x Prunus persica] Back     alignment and taxonomy information
>gi|83853953|gb|ABC47923.1| pathogenesis-related protein 5 [Malus x domestica] Back     alignment and taxonomy information
>gi|60418844|gb|AAX19849.1| thaumatin-like protein precursor [Malus x domestica] gi|60418846|gb|AAX19850.1| thaumatin-like protein precursor [Malus x domestica] gi|60418848|gb|AAX19851.1| thaumatin-like protein precursor [Malus x domestica] Back     alignment and taxonomy information
>gi|60418840|gb|AAX19847.1| thaumatin-like protein precursor [Malus x domestica] gi|60418842|gb|AAX19848.1| thaumatin-like protein precursor [Malus x domestica] Back     alignment and taxonomy information
>gi|190613907|gb|ACE80957.1| putative allergen Pru p 2.01A [Prunus dulcis x Prunus persica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query244
UNIPROTKB|Q9SMH2243 TL1 "Thaumatin-like protein 1" 0.991 0.995 0.689 1.3e-93
UNIPROTKB|Q9FSG7246 TL1 "Thaumatin-like protein 1a 0.995 0.987 0.672 1.5e-92
UNIPROTKB|O80327244 TL1 "Thaumatin-like protein 1" 0.991 0.991 0.644 4.5e-91
UNIPROTKB|P83332246 P83332 "Thaumatin-like protein 0.995 0.987 0.668 4.5e-91
UNIPROTKB|P83336212 P83336 "Thaumatin-like protein 0.868 1.0 0.680 2.4e-83
UNIPROTKB|P83335242 P83335 "Thaumatin-like protein 0.983 0.991 0.621 2.2e-82
TAIR|locus:2198641316 AT1G20030 "AT1G20030" [Arabido 0.963 0.743 0.543 5.1e-74
TAIR|locus:2005549330 AT1G75800 "AT1G75800" [Arabido 0.971 0.718 0.528 1.4e-71
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.938 0.927 0.566 9.9e-71
TAIR|locus:2037235239 PR5 "AT1G75040" [Arabidopsis t 0.971 0.991 0.540 8e-69
UNIPROTKB|Q9SMH2 TL1 "Thaumatin-like protein 1" [Castanea sativa (taxid:21020)] Back     alignment and assigned GO terms
 Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
 Identities = 169/245 (68%), Positives = 198/245 (80%)

Query:     1 MMNTRAIFCLTFS-FLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAK 59
             MM T A++ LT + F +SGAH A ITFTNNC  TIWPG LT+D   QL   GF LASKA 
Sbjct:     1 MMKTLALYGLTLALFFLSGAHSAKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKAS 60

Query:    60 KTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAAD 119
              TL V +PWKGRFWART+C+ +S GKFTC TADC +GQV CNGNGA PPASLVE  IAA+
Sbjct:    61 LTLGVQAPWKGRFWARTRCTTNS-GKFTCETADCSTGQVACNGNGAIPPASLVEINIAAN 119

Query:   120 KGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACK 179
             +G DF+D+SLVDG+NLP+SVA +GG+G  C  +SC+ANVNAVCP+EL VKGSD +V+ACK
Sbjct:   120 RGMDFYDVSLVDGYNLPVSVATRGGTG-DCKATSCRANVNAVCPAELQVKGSDASVLACK 178

Query:   180 SACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYD 239
             SAC AFN+PQYCCTGAF+   TCP TKYS+IFK QCPQAYSYAYDD TSTF+C+G P+Y 
Sbjct:   179 SACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYV 238

Query:   240 ITFCP 244
             ITFCP
Sbjct:   239 ITFCP 243
GO:0005575 "cellular_component" evidence=ND
GO:0050832 "defense response to fungus" evidence=NAS
UNIPROTKB|Q9FSG7 TL1 "Thaumatin-like protein 1a" [Malus x domestica (taxid:3750)] Back     alignment and assigned GO terms
UNIPROTKB|O80327 TL1 "Thaumatin-like protein 1" [Pyrus pyrifolia (taxid:3767)] Back     alignment and assigned GO terms
UNIPROTKB|P83332 P83332 "Thaumatin-like protein 1" [Prunus persica (taxid:3760)] Back     alignment and assigned GO terms
UNIPROTKB|P83336 P83336 "Thaumatin-like protein 1b" [Malus x domestica (taxid:3750)] Back     alignment and assigned GO terms
UNIPROTKB|P83335 P83335 "Thaumatin-like protein 2" [Prunus persica (taxid:3760)] Back     alignment and assigned GO terms
TAIR|locus:2198641 AT1G20030 "AT1G20030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005549 AT1G75800 "AT1G75800" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037235 PR5 "AT1G75040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O80327TLP1_PYRPYNo assigned EC number0.64480.99180.9918N/Ano
P83332TLP1_PRUPENo assigned EC number0.66800.99590.9878N/Ano
P83335TLP2_PRUPENo assigned EC number0.64750.91390.9214N/Ano
P83336TP1B_MALDONo assigned EC number0.68070.86881.0N/Ano
Q9SMH2TLP1_CASSANo assigned EC number0.68970.99180.9958N/Ano
Q9FSG7TP1A_MALDONo assigned EC number0.67200.99590.9878N/Ano
P50694TLP_PRUAV3, ., 2, ., 1, ., 3, 90.66390.99180.9877N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00000591001
SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (246 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query244
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 1e-120
pfam00314212 pfam00314, Thaumatin, Thaumatin family 1e-103
smart00205218 smart00205, THN, Thaumatin family 1e-94
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 2e-42
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 1e-41
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 6e-41
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 2e-33
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 7e-05
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information 
 Score =  340 bits (874), Expect = e-120
 Identities = 137/221 (61%), Positives = 161/221 (72%), Gaps = 2/221 (0%)

Query: 23  TITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDS 82
           T T  N C  T+WPG L   G  QL   GFELA    +T+D PS W GRFW RT CS DS
Sbjct: 1   TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDS 60

Query: 83  SGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQ 142
           SGK +CAT DCG G + CNG G APPA+L EFT+    GQDF+D+SLVDG+NLP+S+ PQ
Sbjct: 61  SGKGSCATGDCGGG-LECNGAGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQ 119

Query: 143 GGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETC 202
           GGSG  C T+ C A++NAVCP+EL VK S G V+ACKSAC AFN  +YCC GA+  PETC
Sbjct: 120 GGSGG-CRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLAFNTDEYCCRGAYGTPETC 178

Query: 203 PPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFC 243
            PT YS++FK+ CPQAYSYAYDD TSTF+C+ G NY ITFC
Sbjct: 179 KPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219

This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219
>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 244
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 98.22
cd09216 353 GH64-LPHase-like glycoside hydrolase family 64: la 95.42
cd09220 369 GH64-GluB-like glycoside hydrolase family 64: beta 91.82
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information 
Probab=100.00  E-value=1.9e-86  Score=580.72  Aligned_cols=219  Identities=63%  Similarity=1.210  Sum_probs=210.8

Q ss_pred             EEEEEeCCCCcccceeecCCCCccccCCceEecCCCeEEEecCCCCceeeeeeecccCCCCCCccccccccCCCccccCC
Q 026037           23 TITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNG  102 (244)
Q Consensus        23 t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriwaRtgC~~~~~g~~~C~TGdCgsg~l~C~g  102 (244)
                      +|||+|||+||||||+++++|++.+..+||+|+||++++|++|++|+|||||||+|++|+.|+++|+||||+ |+|+|+|
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCg-g~l~C~g   79 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCG-GGLECNG   79 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCC-CeeecCC
Confidence            599999999999999999999999988999999999999999999999999999999999999999999999 9999998


Q ss_pred             CCCCCCcceEEEEeecCCCCcccccccccccCCCceeccCCCCCCCCCCCCccchhhhcCCccccccCCCCcEecccchh
Q 026037          103 NGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSAC  182 (244)
Q Consensus       103 ~g~~~p~TlaEftl~~~~g~d~YDVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dl~~~CP~~l~v~~~~g~~vgC~S~C  182 (244)
                      .+++||+|||||+|++.+++|||||||||||||||+|+|+++... |+.++|.+|||..||+||||++.+|+||||||||
T Consensus        80 ~~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~-C~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC  158 (219)
T cd09218          80 AGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGG-CRTAGCVADLNAVCPAELQVKNSGGRVVACKSAC  158 (219)
T ss_pred             CCCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCC-CCCCcccCcccccCCHHHeeccCCCcEeeecCHH
Confidence            887899999999999877889999999999999999999865444 9999999999999999999998779999999999


Q ss_pred             hhcCCCcccccCCCCCCCCCCCchhhHHHHhhCCCcccccCCCCCcceecCCCCceEEEcc
Q 026037          183 AAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFC  243 (244)
Q Consensus       183 ~~~~~~~~CC~g~~~~~~~C~pt~ys~~fK~~CP~AYsya~Dd~ts~~tC~~~~~y~VtFC  243 (244)
                      .+|++|||||+|+|++|++|+|+.|+++||++||+||+|||||++++|+|+++++|+|+||
T Consensus       159 ~~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         159 LAFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             HhhCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            9999999999999999999999999999999999999999999999999998899999999

This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele
>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information
>cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like Back     alignment and domain information
>cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query244
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 5e-91
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 1e-87
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 1e-41
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 2e-40
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 6e-39
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 3e-37
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 1e-36
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 1e-33
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 3e-32
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 6e-32
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 7e-32
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 7e-32
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 8e-32
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 4e-31
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 9e-31
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 3e-13
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure 
Iteration: 1

 Score =  330 bits (846), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 157/223 (70%), Positives = 184/223 (82%), Gaps = 1/223 (0%)
Query: 22  ATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRD 81
           A ITFTNNC NT+WPG LT D   QLS  GFELASKA +++D PSPW GRFW RT+CS D
Sbjct: 1   AKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTD 60
Query: 82  SSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAP 141
           ++GKFTC TADCGSGQV CNG GA PPA+LVE TIAA+ GQD++D+SLVDGFNLP+SVAP
Sbjct: 61  AAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAP 120
Query: 142 QGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPET 201
           QGG+G  C  SSC ANVN VCP+ L VK +DG+VI+CKSAC AF + +YCCT   N PET
Sbjct: 121 QGGTGE-CKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPET 179
Query: 202 CPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 244
           CPPT+YS+IF+ QCPQAYSYAYDD+ STF+C+GGP+Y ITFCP
Sbjct: 180 CPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 222
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query244
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 1e-76
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 2e-61
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 1e-54
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 3e-54
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 2e-52
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 2e-38
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
 Score =  230 bits (586), Expect = 1e-76
 Identities = 155/223 (69%), Positives = 172/223 (77%), Gaps = 1/223 (0%)

Query: 22  ATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRD 81
           ATI+F NNC   +WPG LT+D   QLS  GFELAS+A   LD P PW GRFWART CS D
Sbjct: 1   ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTD 60

Query: 82  SSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAP 141
           +SGKF CATADC SGQV CNGNGA PPA+L EF I A  GQDF+D+SLVDGFNLP+SV P
Sbjct: 61  ASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTP 120

Query: 142 QGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPET 201
           QGG+G  C T+SC ANVNAVCPSEL  KGSDG+V+AC SAC  F  PQYCCT   N PET
Sbjct: 121 QGGTG-DCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPET 179

Query: 202 CPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 244
           CPPT YS+IF + CP AYSYAYDD+  TF+C GGPNY ITFCP
Sbjct: 180 CPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query244
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A 367 Laminaripentaose-producing beta-1,3-guluase (lphas 94.03
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
Probab=100.00  E-value=4.5e-91  Score=610.01  Aligned_cols=222  Identities=70%  Similarity=1.308  Sum_probs=214.2

Q ss_pred             eEEEEEeCCCCcccceeecCCCCccccCCceEecCCCeEEEecCCCCceeeeeeecccCCCCCCccccccccCCCccccC
Q 026037           22 ATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCN  101 (244)
Q Consensus        22 ~t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriwaRtgC~~~~~g~~~C~TGdCgsg~l~C~  101 (244)
                      ++|||+|+|+|||||++++++|++++..+|++|++|+++++.+|++|+|||||||+|+||++|+++|+||||++|+|+|+
T Consensus         1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~   80 (222)
T 2ahn_A            1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCN   80 (222)
T ss_dssp             CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCT
T ss_pred             CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecC
Confidence            58999999999999999999999999899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcceEEEEeecCCCCcccccccccccCCCceeccCCCCCCCCCCCCccchhhhcCCccccccCCCCcEecccch
Q 026037          102 GNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSA  181 (244)
Q Consensus       102 g~g~~~p~TlaEftl~~~~g~d~YDVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dl~~~CP~~l~v~~~~g~~vgC~S~  181 (244)
                      +.+++||+|||||+|++.+++|||||||||||||||+|+|+++++. |+.++|.+|||..||.||||++.+|++|||||+
T Consensus        81 g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~~-C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~sa  159 (222)
T 2ahn_A           81 GNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGD-CKTASCPANVNAVCPSELQKKGSDGSVVACLSA  159 (222)
T ss_dssp             TCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBSC-CCCEEECSCGGGGCCGGGEEECTTSCEEEECCH
T ss_pred             CCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCCC-cccCcccCchhhhCCHHHeeecCCCcEeccccc
Confidence            9777899999999999877899999999999999999999876445 999999999999999999998878999999999


Q ss_pred             hhhcCCCcccccCCCCCCCCCCCchhhHHHHhhCCCcccccCCCCCcceecCCCCceEEEccC
Q 026037          182 CAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP  244 (244)
Q Consensus       182 C~~~~~~~~CC~g~~~~~~~C~pt~ys~~fK~~CP~AYsya~Dd~ts~~tC~~~~~y~VtFCP  244 (244)
                      |.+|++|||||+|+|++|++|+|+.|+++||++||+||+|||||++|+|+|+++++|+|||||
T Consensus       160 C~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP  222 (222)
T 2ahn_A          160 CVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP  222 (222)
T ss_dssp             HHHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred             ccccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence            999999999999999999999999999999999999999999999999999998899999998
>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 244
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 2e-74
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 1e-72
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 8e-68
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Zeamatin
species: Maize (Zea mays) [TaxId: 4577]

 Score =  222 bits (567), Expect = 2e-74
 Identities = 92/224 (41%), Positives = 118/224 (52%), Gaps = 19/224 (8%)

Query: 22  ATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSP-WKGRFWARTQCSR 80
           A  T  N C  T+W  ++   GG        +L       +  P+     R WART C  
Sbjct: 1   AVFTVVNQCPFTVWAASVPVGGG-------RQLNRGESWRITAPAGTTAARIWARTGCKF 53

Query: 81  DSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVA 140
           D+SG+ +C T DCG G + C G G   P +L E+ +      DFFD+SL+DGFN+P+S  
Sbjct: 54  DASGRGSCRTGDCG-GVLQCTGYGR-APNTLAEYALKQFNNLDFFDISLIDGFNVPMSFL 111

Query: 141 PQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPE 200
           P GGSG       C  +VNA CP+EL   G       C +AC  F + +YCC G+     
Sbjct: 112 PDGGSG-CSRGPRCAVDVNARCPAELRQDG------VCNNACPVFKKDEYCCVGSA--AN 162

Query: 201 TCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGGPNYDITFCP 244
            C PT YS+ FK QCP AYSY  DD TSTF+C  G NY + FCP
Sbjct: 163 DCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query244
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=100.00  E-value=2.6e-81  Score=541.55  Aligned_cols=204  Identities=41%  Similarity=0.878  Sum_probs=191.5

Q ss_pred             ceEEEEEeCCCCcccceeecCCCCccccCCceEecCCCeEEEecCCCCc-eeeeeeecccCCCCCCccccccccCCCccc
Q 026037           21 LATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWK-GRFWARTQCSRDSSGKFTCATADCGSGQVT   99 (244)
Q Consensus        21 ~~t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~Ws-GriwaRtgC~~~~~g~~~C~TGdCgsg~l~   99 (244)
                      +++|||+|||+|||||++++.+|       |++|++|+++++.+|++|. |||||||+|++|+.|+++|+||||+ |+|+
T Consensus         1 ~~~fti~N~C~~TVWp~~~p~~g-------g~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCg-g~l~   72 (208)
T d1auna_           1 SGVFEVHNNCPYTVWAAATPVGG-------GRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCG-GVLE   72 (208)
T ss_dssp             CCEEEEEECSSSCEEEEEETTTE-------EEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCT-TBSS
T ss_pred             CCEEEEEeCCCCCcccccccCCC-------CcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcC-CeEe
Confidence            47999999999999999988654       8999999999999999985 9999999999999999999999999 9999


Q ss_pred             cCCCCCCCCcceEEEEeecCCCCcccccccccccCCCceeccCCCCCCCCCCCCccchhhhcCCccccccCCCCcEeccc
Q 026037          100 CNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACK  179 (244)
Q Consensus       100 C~g~g~~~p~TlaEftl~~~~g~d~YDVSlVdG~NlP~~i~p~~g~~~~C~~~~C~~dl~~~CP~~l~v~~~~g~~vgC~  179 (244)
                      |++.| +||+|||||+|++.+++|||||||||||||||+|+|+++....|+.++|.+|||..||.||||++      ||+
T Consensus        73 C~~~G-~pP~TlaEftl~~~~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~~------~C~  145 (208)
T d1auna_          73 CKGWG-KPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG------GCN  145 (208)
T ss_dssp             CSSCC-CSSCCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETT------EEC
T ss_pred             cCCCC-CCCcceEEEEeccCCCcceeccccccccccceEEeccCCCCCCcCcccccCCccccCCHhhccCC------CCc
Confidence            99886 49999999999987789999999999999999999987544459999999999999999999976      799


Q ss_pred             chhhhcCCCcccccCCCCCCCCCCCchhhHHHHhhCCCcccccCCCCCcceecCCC-CceEEEccC
Q 026037          180 SACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDDRTSTFSCTGG-PNYDITFCP  244 (244)
Q Consensus       180 S~C~~~~~~~~CC~g~~~~~~~C~pt~ys~~fK~~CP~AYsya~Dd~ts~~tC~~~-~~y~VtFCP  244 (244)
                      |+|.+|+.|||||+.     ++|+|++|+++||++||+||+|||||++|||+|+++ ++|+|||||
T Consensus       146 saC~~~~~~~~CCt~-----~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP  206 (208)
T d1auna_         146 NPCTTFGGQQYCCTQ-----GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP  206 (208)
T ss_dssp             CHHHHTCSHHHHCTT-----SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEEST
T ss_pred             cceeecCCCccccCC-----CcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCC
Confidence            999999999999974     789999999999999999999999999999999875 799999999
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure