Citrus Sinensis ID: 026085


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240---
MADRSPTSSEFQAPVSHITNPISGNQFFVWREFLWGGIAGGFGEGMMHPVDTVKTRIQSQAILSGSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPNFLCILVIF
ccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHcccccccccccHHHHHHHHHHHcccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcc
cccccccHHHHccHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccHHHEHHHHHHcccccccccccHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHccHHHHHcccccHHHHHHHHHHHHHHHHHccccEEEEc
madrsptssefqapvshitnpisgnqFFVWREFlwggiaggfgegmmhpvdTVKTRIQSQAILSGSQNQKSISQMVRSVWAAdglrgfyrgvtpgvtgslatgaTYFGFIESTKKWieeshpslgghwAHFIAGAvgdtlgsfvyvpCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPNFLCILVIF
madrsptssefqapvshitnpiSGNQFFVWREFLWGGIAGGFGEGMMHPVDTVKTRIQSQAIlsgsqnqksiSQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPNFLCILVIF
MADRSPTSSEFQAPVSHITNPISGNQFFVWREFLWggiaggfgegMMHPVDTVKTRIQSQAILSGSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPNFLCILVIF
*****************ITNPISGNQFFVWREFLWGGIAGGFGEGMMHPVDTVKTRIQS*AI**********SQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPNFLCILVI*
*****************************WREFLWGGIAGGFGEGMMHPVDTVKTRIQS************ISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEE***SLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPNFLCILVIF
************APVSHITNPISGNQFFVWREFLWGGIAGGFGEGMMHPVDTVKTRIQSQAI***********QMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPNFLCILVIF
MADRSPTSSEFQAPVSHITNPISGNQFFVWREFLWGGIAGGFGEGMMHPVDTVKTRIQSQAILSGSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTI*******************MYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPNFLCILVIF
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHo
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHi
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHi
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MADRSPTSSEFQAPVSHITNPISGNQFFVWREFLWGGIAGGFGEGMMHPVDTVKTRIQSQAILSGSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPNFLCILVIF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query243 2.2.26 [Sep-21-2011]
Q03829 368 Uncharacterized mitochond yes no 0.728 0.480 0.359 2e-25
Q55E45303 Mitochondrial substrate c yes no 0.695 0.557 0.321 4e-21
Q76PC3 338 Uncharacterized mitochond yes no 0.728 0.523 0.317 1e-19
Q55DY8 308 Mitoferrin OS=Dictyosteli no no 0.695 0.548 0.317 2e-16
Q4V9P0267 S-adenosylmethionine mito no no 0.609 0.554 0.305 5e-15
Q6GLA2269 S-adenosylmethionine mito yes no 0.604 0.546 0.310 5e-15
Q641C8266 S-adenosylmethionine mito N/A no 0.596 0.545 0.310 2e-14
Q5U680274 S-adenosylmethionine mito yes no 0.588 0.521 0.293 4e-14
Q70HW3274 S-adenosylmethionine mito yes no 0.588 0.521 0.282 1e-13
Q6DG32311 Solute carrier family 25 no no 0.728 0.569 0.260 1e-13
>sp|Q03829|YM39_YEAST Uncharacterized mitochondrial carrier YMR166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR166C PE=1 SV=1 Back     alignment and function desciption
 Score =  115 bits (289), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 108/203 (53%), Gaps = 26/203 (12%)

Query: 29  VWREFLWGGIAGGFGEGMMHPVDTVKTRIQSQAILSGSQNQKSISQMV---RSVWAADGL 85
           +W   + GGI G  G+  MH +DTVKTR Q      G+ N K    M+   R++W  +G+
Sbjct: 53  IWHCVVSGGIGGKIGDSAMHSLDTVKTRQQ------GAPNVKKYRNMISAYRTIWLEEGV 106

Query: 86  R-GFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHPSLGGHWAHFIAGAVGDTLGSFV 144
           R G Y G    + GS  + A +FG  E TK+ + E    +     H  AG +GD + SFV
Sbjct: 107 RRGLYGGYMAAMLGSFPSAAIFFGTYEYTKRTMIEDW-QINDTITHLSAGFLGDFISSFV 165

Query: 145 YVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGY-YTGIYQAGSSIWREQGLRG 203
           YVP EV+K R+Q+QG           +N   +S     GY Y+ +  A  ++ +E+G R 
Sbjct: 166 YVPSEVLKTRLQLQGRF---------NNPFFQS-----GYNYSNLRNAIKTVIKEEGFRS 211

Query: 204 LYAGYWSTLARDVPFAGLMVCYF 226
           L+ GY +TLARD+PF+ L   ++
Sbjct: 212 LFFGYKATLARDLPFSALQFAFY 234





Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)
>sp|Q55E45|MCFE_DICDI Mitochondrial substrate carrier family protein E OS=Dictyostelium discoideum GN=mcfE PE=3 SV=1 Back     alignment and function description
>sp|Q76PC3|YQ73_SCHPO Uncharacterized mitochondrial carrier C1442.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1442.03 PE=3 SV=1 Back     alignment and function description
>sp|Q55DY8|MFRN_DICDI Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=3 SV=1 Back     alignment and function description
>sp|Q4V9P0|SAMC_DANRE S-adenosylmethionine mitochondrial carrier protein OS=Danio rerio GN=slc25a26 PE=2 SV=1 Back     alignment and function description
>sp|Q6GLA2|SAMC_XENTR S-adenosylmethionine mitochondrial carrier protein OS=Xenopus tropicalis GN=slc25a26 PE=2 SV=1 Back     alignment and function description
>sp|Q641C8|SAMC_XENLA S-adenosylmethionine mitochondrial carrier protein OS=Xenopus laevis GN=slc25a26 PE=2 SV=1 Back     alignment and function description
>sp|Q5U680|SAMC_MOUSE S-adenosylmethionine mitochondrial carrier protein OS=Mus musculus GN=Slc25a26 PE=2 SV=2 Back     alignment and function description
>sp|Q70HW3|SAMC_HUMAN S-adenosylmethionine mitochondrial carrier protein OS=Homo sapiens GN=SLC25A26 PE=2 SV=1 Back     alignment and function description
>sp|Q6DG32|S2536_DANRE Solute carrier family 25 member 36-A OS=Danio rerio GN=slc25a36a PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query243
297839303 364 hypothetical protein ARALYDRAFT_339621 [ 0.942 0.629 0.719 2e-96
449440848 361 PREDICTED: uncharacterized mitochondrial 0.921 0.620 0.742 1e-95
357457413 358 Mitochondrial substrate carrier family p 0.921 0.625 0.733 1e-92
356508500 360 PREDICTED: uncharacterized mitochondrial 0.646 0.436 0.774 5e-91
357457383 363 Mitochondrial substrate carrier family p 0.921 0.617 0.717 8e-91
12324905 367 putative mitochondrial carrier protein; 0.942 0.623 0.706 9e-91
30699000 364 Mitochondrial substrate carrier family p 0.942 0.629 0.706 1e-90
242036505 368 hypothetical protein SORBIDRAFT_01g04294 0.868 0.573 0.723 9e-90
225457221 352 PREDICTED: mitochondrial substrate carri 0.600 0.414 0.771 2e-89
147775372 376 hypothetical protein VITISV_022947 [Viti 0.687 0.444 0.766 2e-89
>gi|297839303|ref|XP_002887533.1| hypothetical protein ARALYDRAFT_339621 [Arabidopsis lyrata subsp. lyrata] gi|297333374|gb|EFH63792.1| hypothetical protein ARALYDRAFT_339621 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 167/232 (71%), Positives = 196/232 (84%), Gaps = 3/232 (1%)

Query: 1   MADRSPTSSEFQAPVSH---ITNPISGNQFFVWREFLWGGIAGGFGEGMMHPVDTVKTRI 57
           MA +SP SS  Q P+S+   +    + +QFFVWREFLWGGIAG FGEGMMHPVDT+KTR+
Sbjct: 1   MATKSPDSSHEQPPLSYRKSVEIKATHDQFFVWREFLWGGIAGAFGEGMMHPVDTLKTRL 60

Query: 58  QSQAILSGSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWI 117
           QSQ I++ +Q QKSI QM+R+VW  DGL+GFYRG+ PGVTGSLATGATYFGFIESTKKWI
Sbjct: 61  QSQIIMNATQRQKSIPQMLRTVWVGDGLKGFYRGIAPGVTGSLATGATYFGFIESTKKWI 120

Query: 118 EESHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKS 177
           EESHPSL GHWAHFIAGAVGDTLGSFVYVPCEV+KQRMQ+QGT  SW S ++++++ VK 
Sbjct: 121 EESHPSLAGHWAHFIAGAVGDTLGSFVYVPCEVIKQRMQIQGTSSSWSSFILRNSVPVKP 180

Query: 178 NLQMYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCL 229
              MYGYYTG++QAG SIW+EQG +GLYAGYWSTLARDVPFAGLMV ++  L
Sbjct: 181 RGDMYGYYTGMFQAGCSIWKEQGPKGLYAGYWSTLARDVPFAGLMVVFYEAL 232




Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440848|ref|XP_004138196.1| PREDICTED: uncharacterized mitochondrial carrier YMR166C-like [Cucumis sativus] gi|449524978|ref|XP_004169498.1| PREDICTED: uncharacterized mitochondrial carrier YMR166C-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357457413|ref|XP_003598987.1| Mitochondrial substrate carrier family protein E [Medicago truncatula] gi|355488035|gb|AES69238.1| Mitochondrial substrate carrier family protein E [Medicago truncatula] Back     alignment and taxonomy information
>gi|356508500|ref|XP_003522994.1| PREDICTED: uncharacterized mitochondrial carrier C1442.03-like [Glycine max] Back     alignment and taxonomy information
>gi|357457383|ref|XP_003598972.1| Mitochondrial substrate carrier family protein E [Medicago truncatula] gi|355488020|gb|AES69223.1| Mitochondrial substrate carrier family protein E [Medicago truncatula] Back     alignment and taxonomy information
>gi|12324905|gb|AAG52407.1|AC020579_9 putative mitochondrial carrier protein; 35518-32968 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30699000|ref|NP_177564.2| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|26450340|dbj|BAC42286.1| putative mitochondrial carrier protein [Arabidopsis thaliana] gi|28827414|gb|AAO50551.1| putative mitochondrial carrier protein [Arabidopsis thaliana] gi|332197448|gb|AEE35569.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|242036505|ref|XP_002465647.1| hypothetical protein SORBIDRAFT_01g042940 [Sorghum bicolor] gi|241919501|gb|EER92645.1| hypothetical protein SORBIDRAFT_01g042940 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|225457221|ref|XP_002280848.1| PREDICTED: mitochondrial substrate carrier family protein X-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147775372|emb|CAN77961.1| hypothetical protein VITISV_022947 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query243
TAIR|locus:2019657 364 AT1G74240 "AT1G74240" [Arabido 0.930 0.620 0.672 7.2e-84
SGD|S000004776 368 YMR166C "Predicted transporter 0.654 0.432 0.362 9e-22
DICTYBASE|DDB_G0269394303 mcfE "mitochondrial substrate 0.658 0.528 0.325 4.4e-20
POMBASE|SPCC1442.03 338 SPCC1442.03 "mitochondrial ATP 0.674 0.485 0.324 4.2e-18
CGD|CAL0005755 366 orf19.4159 [Candida albicans ( 0.740 0.491 0.318 1.7e-16
UNIPROTKB|Q59SL4 366 CaO19.11635 "Potential mitocho 0.740 0.491 0.318 1.7e-16
TAIR|locus:2122452325 SAMC1 "S-adenosylmethionine ca 0.296 0.221 0.388 3e-15
DICTYBASE|DDB_G0274501436 mcfY "mitochondrial substrate 0.674 0.376 0.326 1e-13
TAIR|locus:2007387326 AT1G07030 [Arabidopsis thalian 0.670 0.5 0.272 4.5e-13
TAIR|locus:2123096628 AT4G11440 [Arabidopsis thalian 0.551 0.213 0.305 2.1e-12
TAIR|locus:2019657 AT1G74240 "AT1G74240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
 Identities = 154/229 (67%), Positives = 183/229 (79%)

Query:     1 MADRSPTSSEFQAPVSH---ITNPISGNQFFVWREFLWXXXXXXXXXXMMHPVDTVKTRI 57
             MA +S  SS  Q+P S    +    + +QFFVWREFLW          MMHPVDT+KTR+
Sbjct:     1 MATKSSDSSHKQSPPSFRKSVEIKATHDQFFVWREFLWGGIAGAFGEGMMHPVDTLKTRL 60

Query:    58 QSQAILSGSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWI 117
             QSQ I++ +Q QKSI QM+R+VW  DGL+GFYRG+ PGVTGSLATGATYFGFIESTKKWI
Sbjct:    61 QSQIIMNATQRQKSILQMLRTVWVGDGLKGFYRGIAPGVTGSLATGATYFGFIESTKKWI 120

Query:   118 EESHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKS 177
             EESHPSL GHWAHFIAGAVGDTLGSF+YVPCEV+KQRMQ+QGT  SW S + ++++ V+ 
Sbjct:   121 EESHPSLAGHWAHFIAGAVGDTLGSFIYVPCEVIKQRMQIQGTSSSWSSYISRNSVPVQP 180

Query:   178 NLQMYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYF 226
                MYGYYTG++QAG SIW+EQG +GLYAGYWSTLARDVPFAGLMV ++
Sbjct:   181 RGDMYGYYTGMFQAGCSIWKEQGPKGLYAGYWSTLARDVPFAGLMVVFY 229




GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
SGD|S000004776 YMR166C "Predicted transporter of the mitochondrial inner membrane" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269394 mcfE "mitochondrial substrate carrier family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
POMBASE|SPCC1442.03 SPCC1442.03 "mitochondrial ATP-Mg/Pi carrier (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
CGD|CAL0005755 orf19.4159 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59SL4 CaO19.11635 "Potential mitochondrial carrier protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
TAIR|locus:2122452 SAMC1 "S-adenosylmethionine carrier 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0274501 mcfY "mitochondrial substrate carrier family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2007387 AT1G07030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2123096 AT4G11440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
fgenesh1_pg.C_scaffold_2001720
annotation not avaliable (364 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query243
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-20
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-12
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 2e-11
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 6e-09
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 81.9 bits (203), Expect = 3e-20
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 25  NQFFVWREFLWGGIAGGFGEGMMHPVDTVKTRIQSQAILSGSQNQKSISQMVRSVWAADG 84
           +        L GGIAG     + +P+D VKTR+QS A   GS+  K I    + ++  +G
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAA-GGSRKYKGILDCFKKIYKEEG 59

Query: 85  LRGFYRGVTPGVTGSLATGATYFGFIESTKKWI 117
           +RG Y+G+ P +       A YFG  E+ KK +
Sbjct: 60  IRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLL 92


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 243
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0770 353 consensus Predicted mitochondrial carrier protein 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0762 311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.98
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.97
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.97
KOG0765333 consensus Predicted mitochondrial carrier protein 99.97
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.96
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.96
KOG0766297 consensus Predicted mitochondrial carrier protein 99.96
KOG0765333 consensus Predicted mitochondrial carrier protein 99.96
KOG0036463 consensus Predicted mitochondrial carrier protein 99.96
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.96
KOG0766297 consensus Predicted mitochondrial carrier protein 99.96
KOG0036463 consensus Predicted mitochondrial carrier protein 99.95
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.95
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.95
KOG0770353 consensus Predicted mitochondrial carrier protein 99.95
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.94
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.94
KOG0769308 consensus Predicted mitochondrial carrier protein 99.94
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.93
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.92
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.92
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.9
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.8
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.78
KOG2745321 consensus Mitochondrial carrier protein [General f 99.71
KOG2954427 consensus Mitochondrial carrier protein [General f 99.68
KOG1519297 consensus Predicted mitochondrial carrier protein 99.65
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.5
KOG1519297 consensus Predicted mitochondrial carrier protein 99.45
KOG2745321 consensus Mitochondrial carrier protein [General f 99.42
KOG2954427 consensus Mitochondrial carrier protein [General f 98.66
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=2.1e-40  Score=274.99  Aligned_cols=191  Identities=21%  Similarity=0.339  Sum_probs=170.7

Q ss_pred             CchhHHHHHHHHHHHHHHHhhcccHHHHHHHHHhccccCCCCCCCCHHHHHHHHHHhcchhhhccCchhhhhhhHhhHHH
Q 026085           26 QFFVWREFLWGGIAGGFGEGMMHPVDTVKTRIQSQAILSGSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGAT  105 (243)
Q Consensus        26 ~~~~~~~~~~g~~ag~~~~~~~~Pld~ik~r~Q~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~~  105 (243)
                      ..+++..+++|++||+++.+++||||++|+|+-++..   ...|+++.+++++|+++||++|||||+.|++++.+|+.++
T Consensus       123 ~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~---~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~  199 (320)
T KOG0752|consen  123 SLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGE---LKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGI  199 (320)
T ss_pred             ccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecc---cccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhh
Confidence            6788999999999999999999999999999999863   3479999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHH-HhhhcCC-CCCchHHHHHHHHHHhhhhhhccccHHHHHHHHHhcccccccccccccccccccccccccC
Q 026085          106 YFGFIESTKK-WIEESHP-SLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYG  183 (243)
Q Consensus       106 ~f~~~~~~k~-~~~~~~~-~~~~~~~~~~~g~~a~~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (243)
                      .|.+||.+|+ ...+..+ +..+.+..+++|++||+++.++++|||++|.|||+.+...                .....
T Consensus       200 ~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~----------------~~~~~  263 (320)
T KOG0752|consen  200 NFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKY----------------FGGGF  263 (320)
T ss_pred             HHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCccc----------------ccccc
Confidence            9999999999 4433322 4667789999999999999999999999999999987531                11124


Q ss_pred             CCCcHHHHHHHHHHhhchhhhccchhHHHhhhhhhhhHHHHHHHHHHHHhhh
Q 026085          184 YYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPN  235 (243)
Q Consensus       184 ~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~ye~l~~~~~~  235 (243)
                      ++.++++|+++|+++||+.|||||+.|++++.+|..++.|.+||.+|..+..
T Consensus       264 ~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~~  315 (320)
T KOG0752|consen  264 RYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLRL  315 (320)
T ss_pred             ccccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhhc
Confidence            5689999999999999999999999999999999999999999999976543



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query243
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 2e-07
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-06
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 22/181 (12%) Query: 47 MHPVDTVKTRIQSQAILSGSQNQ-KSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGAT 105 ++P+D +TR+ + +Q + + + ++ +DGLRG Y+G V G + A Sbjct: 130 VYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAA 189 Query: 106 YFGFIESTKKWI-EESHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSW 164 YFG ++ K + + + + W IA V G Y P + +++RM +Q K Sbjct: 190 YFGVYDTAKGMLPDPKNVHIIVSW--MIAQTVTAVAGLVSY-PFDTVRRRMMMQSGRK-- 244 Query: 165 GSILMKDNICVKSNLQMYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVC 224 G+ +M YTG I +++G + + G WS + R + A ++V Sbjct: 245 GADIM---------------YTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVL 289 Query: 225 Y 225 Y Sbjct: 290 Y 290
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query243
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-32
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-30
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-30
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-27
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  118 bits (298), Expect = 3e-32
 Identities = 41/207 (19%), Positives = 79/207 (38%), Gaps = 20/207 (9%)

Query: 20  NPISGNQFFVWREFLWGGIAGGFGEGMMHPVDTVKTRIQSQAILSGSQNQ-KSISQMVRS 78
           +       +       GG AG      ++P+D  +TR+ +      +Q +   +   +  
Sbjct: 103 DRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITK 162

Query: 79  VWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHPSLGGHWAHFIAGAVGD 138
           ++ +DGLRG Y+G    V G +   A YFG  ++ K  + +           ++      
Sbjct: 163 IFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNV--HIIVSWMIAQTVT 220

Query: 139 TLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYTGIYQAGSSIWRE 198
            +   V  P + +++RM +Q   K                      YTG       I ++
Sbjct: 221 AVAGLVSYPFDTVRRRMMMQSGRKGADI-----------------MYTGTVDCWRKIAKD 263

Query: 199 QGLRGLYAGYWSTLARDVPFAGLMVCY 225
           +G +  + G WS + R +  A ++V Y
Sbjct: 264 EGPKAFFKGAWSNVLRGMGGAFVLVLY 290


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query243
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=3.6e-40  Score=278.63  Aligned_cols=189  Identities=19%  Similarity=0.290  Sum_probs=172.6

Q ss_pred             chhHHHHHHHHHHHHHHHhhcccHHHHHHHHHhccccCCCCCCCCHHHHHHHHHHhcchhhhccCchhhhhhhHhhHHHH
Q 026085           27 FFVWREFLWGGIAGGFGEGMMHPVDTVKTRIQSQAILSGSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATY  106 (243)
Q Consensus        27 ~~~~~~~~~g~~ag~~~~~~~~Pld~ik~r~Q~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~~~  106 (243)
                      .+.+..+++|++||+++.++++|+|+||+|+|++........|++.++++++|+++||++|||||+.+.+++.++..+++
T Consensus       102 ~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~  181 (303)
T 2lck_A          102 AGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAE  181 (303)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHH
Confidence            56778999999999999999999999999999986433445789999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhcCCCCCchHHHHHHHHHHhhhhhhccccHHHHHHHHHhcccccccccccccccccccccccccCCCC
Q 026085          107 FGFIESTKKWIEESHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMYGYYT  186 (243)
Q Consensus       107 f~~~~~~k~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (243)
                      |.+||.+|+.+.+......+....+++|++|+++++++++|+|++|+|||.+..                      ..|.
T Consensus       182 f~~ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~----------------------~~y~  239 (303)
T 2lck_A          182 LVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL----------------------GQYH  239 (303)
T ss_dssp             HHHHHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS----------------------SSCC
T ss_pred             HHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc----------------------cccC
Confidence            999999999887655445667789999999999999999999999999998764                      2499


Q ss_pred             cHHHHHHHHHHhhchhhhccchhHHHhhhhhhhhHHHHHHHHHHHHhhhhh
Q 026085          187 GIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPNFL  237 (243)
Q Consensus       187 ~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~ye~l~~~~~~~~  237 (243)
                      ++++|+++++++||++|||||+.++++|.+|+.+++|.+||.+|+.+.+.+
T Consensus       240 ~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~~~  290 (303)
T 2lck_A          240 SAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAY  290 (303)
T ss_dssp             SHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCCHH
T ss_pred             CHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999876654



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 243
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 5e-13
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 5e-12
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 64.7 bits (156), Expect = 5e-13
 Identities = 41/223 (18%), Positives = 82/223 (36%), Gaps = 20/223 (8%)

Query: 4   RSPTSSEFQAPVSHITNPISGNQFFVWREFLWGGIAGGFGEGMMHPVDTVKTRIQSQAIL 63
                 +++       +       +       GG AG      ++P+D  +TR+ +    
Sbjct: 86  NFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGK 145

Query: 64  SGSQNQ-KSISQMVRSVWAADGLRGFYRGVTPGVTGSLATGATYFGFIESTKKWIEESHP 122
             +Q +   +   +  ++ +DGLRG Y+G    V G +   A YFG  ++ K  + +   
Sbjct: 146 GAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKN 205

Query: 123 SLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKSNLQMY 182
                   ++       +   V  P + +++RM +Q   K                    
Sbjct: 206 V--HIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADI---------------- 247

Query: 183 GYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCY 225
             YTG       I +++G +  + G WS + R +  A ++V Y
Sbjct: 248 -MYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLY 289


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query243
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=8e-34  Score=236.05  Aligned_cols=195  Identities=19%  Similarity=0.291  Sum_probs=171.3

Q ss_pred             CCchhHHHHHHHHHHHHHHHhhcccHHHHHHHHHhcccc---CCCCCCCCHHHHHHHHHHhcchhhhccCchhhhhhhHh
Q 026085           25 NQFFVWREFLWGGIAGGFGEGMMHPVDTVKTRIQSQAIL---SGSQNQKSISQMVRSVWAADGLRGFYRGVTPGVTGSLA  101 (243)
Q Consensus        25 ~~~~~~~~~~~g~~ag~~~~~~~~Pld~ik~r~Q~~~~~---~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~  101 (243)
                      +..++..++++|++||+++.+++||||+||+|+|++...   .....|+++++++++++++||+++||||+.+.++...+
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            346788999999999999999999999999999998642   22446899999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhhhcCCCCC----chHHHHHHHHHHhhhhhhccccHHHHHHHHHhcccccccccccccccccccc
Q 026085          102 TGATYFGFIESTKKWIEESHPSLG----GHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIKSWGSILMKDNICVKS  177 (243)
Q Consensus       102 ~~~~~f~~~~~~k~~~~~~~~~~~----~~~~~~~~g~~a~~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~  177 (243)
                      ..+++|..||.+++.+.+......    .....+++|.+|++++.++++|+|++|+|+|.+.....              
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~--------------  147 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGA--------------  147 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSST--------------
T ss_pred             ccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccc--------------
Confidence            999999999999998876544433    23567889999999999999999999999999865421              


Q ss_pred             cccccCCCCcHHHHHHHHHHhhchhhhccchhHHHhhhhhhhhHHHHHHHHHHHHhhhh
Q 026085          178 NLQMYGYYTGIYQAGSSIWREQGLRGLYAGYWSTLARDVPFAGLMVCYFCCLILYFPNF  236 (243)
Q Consensus       178 ~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~ye~l~~~~~~~  236 (243)
                         ..+.|.+..+++++++++||+++||+|+.+++++.+++.+++|.+||.+|+.+.+-
T Consensus       148 ---~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~  203 (292)
T d1okca_         148 ---AQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP  203 (292)
T ss_dssp             ---TTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG
T ss_pred             ---cccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc
Confidence               12468899999999999999999999999999999999999999999999876543



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure