Citrus Sinensis ID: 026086

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240---
MLEMCARPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAVSVTFPFVGFKINWRCLFEETGI
cHHHHccccccccccccccccccccccccccccccccccEEEEcccccccccEEEEcccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEccEEEEEEcccccEEEEEEcccccccccEEEEccccccccccHHHHHHHHHHccccccEEEEccccEEEccEEcccccccccccccccccccccccccccccc
ccHHccccccccccccccccccccEEEcccccccccHHHHHHHHHHHHHHHccEEcccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcHHHHHHHHHHHccccccccccccEEEEEEEEccEEEEEEcccccEEEEEcccccccccEEEEEEccccccccHHHHHHHHHHHccccccEEEEEccEEEEEEEEEEEEEccccccccccccEEEHHEHHHHccc
mlemcarplercfgrgdggggdglLWHMdlkshasgdYSIAVVQANSmledqgqvftspsatyvgvydghggpeasrFITRHLfpflhkftteqgglSAEVIKKAFDATEEEFLHLVKRswsarpqiasvgscclvgVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVealhpddshivVFSRGVWRIKGIIQHLIHQAvsvtfpfvgfkinwrclfeetgi
MLEMCARPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGdsravlgrrvsenrknMLVVaerlsvdhnvgVEEVRKevealhpddshiVVFSRGVWRIKGIIQHLIHQAVSVTFPFVGFKINWRCLFEETGI
MLEMCARPLERCFgrgdggggdgLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAVSVTFPFVGFKINWRCLFEETGI
********LERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAVSVTFPFVGFKINWRCLFE****
**E*********************LWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSA*PQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAVSVTFPFVGFKINWRCLFEETGI
MLEMCARPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAVSVTFPFVGFKINWRCLFEETGI
*LEMCARPLERCF******GGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAVSVTFPFVGFKINWRCLFEETG*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLEMCARPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAVSVTFPFVGFKINWRCLFEETGI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query243 2.2.26 [Sep-21-2011]
O81760 380 Probable protein phosphat yes no 0.872 0.557 0.719 2e-85
Q2QN36 392 Probable protein phosphat yes no 0.868 0.538 0.715 6e-80
Q8H063 392 Probable protein phosphat no no 0.798 0.494 0.643 5e-69
Q94H98 380 Probable protein phosphat no no 0.843 0.539 0.571 5e-66
Q5MFV5 380 Probable protein phosphat N/A no 0.843 0.539 0.571 5e-66
Q7XHN8 377 Probable protein phosphat no no 0.790 0.509 0.568 3e-61
Q9SD12 379 Probable protein phosphat no no 0.794 0.509 0.544 6e-61
Q84JD5 393 Probable protein phosphat no no 0.876 0.541 0.537 3e-60
Q7XUC5 388 Probable protein phosphat no no 0.802 0.502 0.574 5e-60
Q10S32 399 Probable protein phosphat no no 0.827 0.503 0.551 2e-59
>sp|O81760|P2C63_ARATH Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana GN=At4g33920 PE=1 SV=1 Back     alignment and function desciption
 Score =  315 bits (806), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 154/214 (71%), Positives = 170/214 (79%), Gaps = 2/214 (0%)

Query: 1   MLEMCARPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPS 60
           ML   ARPLERC G      GDGLLW  +L+ HA GDYSIAVVQANS LEDQ QVFTS S
Sbjct: 1   MLRALARPLERCLG--SRASGDGLLWQSELRPHAGGDYSIAVVQANSRLEDQSQVFTSSS 58

Query: 61  ATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRS 120
           ATYVGVYDGHGGPEASRF+ RHLFP++HKF  E GGLS +VIKKAF  TEEEF  +VKRS
Sbjct: 59  ATYVGVYDGHGGPEASRFVNRHLFPYMHKFAREHGGLSVDVIKKAFKETEEEFCGMVKRS 118

Query: 121 WSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNV 180
              +PQ+A+VGSCCLVG I+ D LYVANLGDSRAVLG  VS    N   VAERLS DHNV
Sbjct: 119 LPMKPQMATVGSCCLVGAISNDTLYVANLGDSRAVLGSVVSGVDSNKGAVAERLSTDHNV 178

Query: 181 GVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQ 214
            VEEVRKEV+AL+PDDS IV+++RGVWRIKGIIQ
Sbjct: 179 AVEEVRKEVKALNPDDSQIVLYTRGVWRIKGIIQ 212

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q2QN36|P2C78_ORYSJ Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1 Back     alignment and function description
>sp|Q8H063|P2C29_ORYSJ Probable protein phosphatase 2C 29 OS=Oryza sativa subsp. japonica GN=Os03g0207400 PE=2 SV=1 Back     alignment and function description
>sp|Q94H98|P2C34_ORYSJ Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1 Back     alignment and function description
>sp|Q5MFV5|P2C34_ORYSI Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. indica GN=BIPP2C2 PE=2 SV=2 Back     alignment and function description
>sp|Q7XHN8|P2C61_ORYSJ Probable protein phosphatase 2C 61 OS=Oryza sativa subsp. japonica GN=Os07g0114000 PE=2 SV=1 Back     alignment and function description
>sp|Q9SD12|P2C46_ARATH Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1 Back     alignment and function description
>sp|Q84JD5|P2C68_ARATH Probable protein phosphatase 2C 68 OS=Arabidopsis thaliana GN=At5g06750 PE=2 SV=1 Back     alignment and function description
>sp|Q7XUC5|P2C43_ORYSJ Probable protein phosphatase 2C 43 OS=Oryza sativa subsp. japonica GN=Os04g0584300 PE=2 SV=2 Back     alignment and function description
>sp|Q10S32|P2C28_ORYSJ Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query243
296087354 384 unnamed protein product [Vitis vinifera] 0.868 0.549 0.814 1e-98
224071253 370 predicted protein [Populus trichocarpa] 0.860 0.564 0.815 7e-97
225428926 381 PREDICTED: probable protein phosphatase 0.864 0.551 0.818 3e-96
296083084 380 unnamed protein product [Vitis vinifera] 0.864 0.552 0.818 3e-96
255567993309 protein phosphatase 2c, putative [Ricinu 0.864 0.679 0.805 4e-96
224060690 381 predicted protein [Populus trichocarpa] 0.876 0.559 0.822 3e-95
147810867 688 hypothetical protein VITISV_034287 [Viti 0.843 0.297 0.822 1e-94
147769815 453 hypothetical protein VITISV_032082 [Viti 0.810 0.434 0.834 5e-93
356575708342 PREDICTED: probable protein phosphatase 0.901 0.640 0.763 2e-91
356575706 373 PREDICTED: probable protein phosphatase 0.876 0.571 0.780 3e-91
>gi|296087354|emb|CBI33728.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 176/216 (81%), Positives = 193/216 (89%), Gaps = 5/216 (2%)

Query: 1   MLEMCARPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPS 60
           +LE C RPLERCF     GGGD LLWH+DLK HASGDYSIAVVQANS LEDQ Q+FTSPS
Sbjct: 4   ILESCCRPLERCF---KAGGGDELLWHLDLKPHASGDYSIAVVQANSSLEDQSQIFTSPS 60

Query: 61  ATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRS 120
           ATY+GVYDGHGGPEASRFIT H+FPFLHKF++EQGGLSAEVIKKAF+ATEEEFLHLVK+S
Sbjct: 61  ATYIGVYDGHGGPEASRFITNHIFPFLHKFSSEQGGLSAEVIKKAFNATEEEFLHLVKQS 120

Query: 121 WSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKN--MLVVAERLSVDH 178
           W ARPQIASVGSCCLVG I+ DVLYVANLGDSRAVLGR+V+  R N   +VVAERLS DH
Sbjct: 121 WLARPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRKVTGGRMNSSQMVVAERLSTDH 180

Query: 179 NVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQ 214
           NVGVEEVRKEV ALHPDD+HIVV++RGVWRI+GIIQ
Sbjct: 181 NVGVEEVRKEVAALHPDDAHIVVYTRGVWRIRGIIQ 216

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224071253|ref|XP_002303382.1| predicted protein [Populus trichocarpa] gi|222840814|gb|EEE78361.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225428926|ref|XP_002262649.1| PREDICTED: probable protein phosphatase 2C 63-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296083084|emb|CBI22488.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255567993|ref|XP_002524974.1| protein phosphatase 2c, putative [Ricinus communis] gi|223535809|gb|EEF37471.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224060690|ref|XP_002300254.1| predicted protein [Populus trichocarpa] gi|222847512|gb|EEE85059.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147810867|emb|CAN60716.1| hypothetical protein VITISV_034287 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147769815|emb|CAN76780.1| hypothetical protein VITISV_032082 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356575708|ref|XP_003555980.1| PREDICTED: probable protein phosphatase 2C 63-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|356575706|ref|XP_003555979.1| PREDICTED: probable protein phosphatase 2C 63-like isoform 1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query243
TAIR|locus:2118899 380 AT4G33920 [Arabidopsis thalian 0.872 0.557 0.700 9.3e-75
TAIR|locus:2170234 393 AT5G06750 [Arabidopsis thalian 0.786 0.486 0.591 7.5e-57
TAIR|locus:2081770 379 AT3G51370 [Arabidopsis thalian 0.773 0.496 0.542 1.4e-55
TAIR|locus:2156877 385 AT5G66080 [Arabidopsis thalian 0.773 0.488 0.55 3.4e-54
TAIR|locus:2091265 385 AT3G12620 [Arabidopsis thalian 0.773 0.488 0.542 1.1e-53
TAIR|locus:2097238 384 AT3G55050 [Arabidopsis thalian 0.773 0.489 0.527 1.2e-51
TAIR|locus:2121234 400 AT4G38520 [Arabidopsis thalian 0.773 0.47 0.562 2.4e-51
TAIR|locus:2086097 384 AT3G17090 [Arabidopsis thalian 0.769 0.486 0.510 6e-48
TAIR|locus:2151256 370 AT5G02760 [Arabidopsis thalian 0.765 0.502 0.507 1.6e-47
TAIR|locus:2008545 445 AT1G67820 [Arabidopsis thalian 0.526 0.287 0.322 1.8e-11
TAIR|locus:2118899 AT4G33920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
 Identities = 150/214 (70%), Positives = 166/214 (77%)

Query:     1 MLEMCARPLERCFXXXXXXXXXXLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPS 60
             ML   ARPLERC           LLW  +L+ HA GDYSIAVVQANS LEDQ QVFTS S
Sbjct:     1 MLRALARPLERCLGSRASGDG--LLWQSELRPHAGGDYSIAVVQANSRLEDQSQVFTSSS 58

Query:    61 ATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGGLSAEVIKKAFDATEEEFLHLVKRS 120
             ATYVGVYDGHGGPEASRF+ RHLFP++HKF  E GGLS +VIKKAF  TEEEF  +VKRS
Sbjct:    59 ATYVGVYDGHGGPEASRFVNRHLFPYMHKFAREHGGLSVDVIKKAFKETEEEFCGMVKRS 118

Query:   121 WSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNV 180
                +PQ+A+VGSCCLVG I+ D LYVANLGDSRAVLG  VS    N   VAERLS DHNV
Sbjct:   119 LPMKPQMATVGSCCLVGAISNDTLYVANLGDSRAVLGSVVSGVDSNKGAVAERLSTDHNV 178

Query:   181 GVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQ 214
              VEEVRKEV+AL+PDDS IV+++RGVWRIKGIIQ
Sbjct:   179 AVEEVRKEVKALNPDDSQIVLYTRGVWRIKGIIQ 212
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0006944 "cellular membrane fusion" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
GO:0043069 "negative regulation of programmed cell death" evidence=RCA
GO:0052542 "defense response by callose deposition" evidence=RCA
TAIR|locus:2170234 AT5G06750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081770 AT3G51370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156877 AT5G66080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091265 AT3G12620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097238 AT3G55050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121234 AT4G38520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086097 AT3G17090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151256 AT5G02760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008545 AT1G67820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O81760P2C63_ARATH3, ., 1, ., 3, ., 1, 60.71960.87240.5578yesno
Q2QN36P2C78_ORYSJ3, ., 1, ., 3, ., 1, 60.71550.86830.5382yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00019625001
SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (384 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query243
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 3e-29
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 5e-29
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 5e-15
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-11
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 8e-10
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 3e-08
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information 
 Score =  109 bits (275), Expect = 3e-29
 Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 29/160 (18%)

Query: 58  SPSATYVGVYDGHGGPEASRFITRHLFPFLHK---FTTEQGGLSAEVIKKAFDATEEEFL 114
           S S  + GV+DGHGG EA++F++++L   L +      ++     E ++KAF +T+EE L
Sbjct: 34  SDSGGFFGVFDGHGGSEAAKFLSKNLPEILAEELIKEKDELEDVEEALRKAFLSTDEEIL 93

Query: 115 HLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERL 174
             ++         A  GS  +V +I+ + LYVAN+GDSRAVL R            A +L
Sbjct: 94  EELE---------ALSGSTAVVALISGNKLYVANVGDSRAVLCRNGK---------AVQL 135

Query: 175 SVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQ 214
           + DH    E+ R  +EA      +         R+ G++ 
Sbjct: 136 TEDHKPSNEDERARIEAAGGFVIN--------GRVNGVLA 167

The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. Length = 252
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 243
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0697 379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 99.98
PTZ00224 381 protein phosphatase 2C; Provisional 99.96
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 99.94
KOG0699 542 consensus Serine/threonine protein phosphatase [Si 99.92
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.91
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.91
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.89
KOG1323 493 consensus Serine/threonine phosphatase [Signal tra 99.74
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.58
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.17
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.06
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 98.88
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 97.94
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 97.18
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=2.8e-36  Score=267.95  Aligned_cols=205  Identities=46%  Similarity=0.739  Sum_probs=176.2

Q ss_pred             CCCccccccCCCCCCCCCccccccCCC-------CCCCCcEEEe--eCCCceEEEEEeCCCchHHHHHHHHHHHHHHHhh
Q 026086           20 GGDGLLWHMDLKSHASGDYSIAVVQAN-------SMLEDQGQVF--TSPSATYVGVYDGHGGPEASRFITRHLFPFLHKF   90 (243)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~s~~~~g~r-------~~~ED~~~~~--~~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~   90 (243)
                      ..++++|.++...+..++++++..+..       +.-||+..+.  ...++.|+||||||||.++|+|++++|+.++...
T Consensus        49 ~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~  128 (390)
T KOG0700|consen   49 SVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARE  128 (390)
T ss_pred             CcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHH
Confidence            568899999999999999998877664       4667776544  4678999999999999999999999999998832


Q ss_pred             hhh--------------------------------c-CCChHHHHHHHHHHHHHHHHHHHHhhccCCCCcccccceEEEE
Q 026086           91 TTE--------------------------------Q-GGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVG  137 (243)
Q Consensus        91 ~~~--------------------------------~-~~~~~~~l~~af~~~~~~~~~~~~~~~~~~~~~~~sGtTa~v~  137 (243)
                      +..                                . ...+.++|.+||.+++++|++...+.....++...+|+||+|.
T Consensus       129 L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~  208 (390)
T KOG0700|consen  129 LQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVG  208 (390)
T ss_pred             hhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEE
Confidence            111                                1 3446789999999999999999999988899999999999999


Q ss_pred             EEECCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCHHHHHHHHHhCCCCCCeEEEeCCeeeecccccccc
Q 026086          138 VIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLI  217 (243)
Q Consensus       138 ~i~~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~~tr  217 (243)
                      ++.+..|||||+|||||||+....++.   .|.+.|||+||+.++++|+.||+..||++..+|+...  |||+|.|++||
T Consensus       209 ~i~~~~LyVaN~GDSRAVLG~~~~~~~---~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~--~RvkG~L~vsR  283 (390)
T KOG0700|consen  209 LIKGGDLYVANVGDSRAVLGVVENNGS---WLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKH--WRVKGILQVSR  283 (390)
T ss_pred             EEeCCeEEEEecCcchhhhceecCCCC---eEEEEecChhhccccHHHHHHHHHhCCCCcceEeecc--ceeeEEEEeee
Confidence            999999999999999999988874443   4799999999999999999999999999999887765  89999999888


Q ss_pred             cccccccCCceeeecCCC
Q 026086          218 HQAVSVTFPFVGFKINWR  235 (243)
Q Consensus       218 ~~g~~~~~gd~~~k~~~~  235 (243)
                            ++||..+|.++.
T Consensus       284 ------AfGd~~lK~~~~  295 (390)
T KOG0700|consen  284 ------AFGDGYLKWPEF  295 (390)
T ss_pred             ------eccceeecchhh
Confidence                  667888887743

>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query243
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 5e-07
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 1e-06
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-06
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 2e-05
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 3e-05
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 4e-05
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 6e-05
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 3e-04
1a6q_A 382 Crystal Structure Of The Protein SerineTHREONINE PH 4e-04
3fxj_A 390 Crystal Structure Of Human Protein Phosphatase 1a ( 4e-04
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure 
Iteration: 1

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 45  ANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHL-FPFLHKFTTEQGGLSA--EV 101
           + SML+  G+     +A + GVYDGHGG + + +    +      +   E+  LS     
Sbjct: 38  SGSMLD--GRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTW 95
Query: 102 IKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVS 161
           ++K   A    FL +     S  P+  +VGS  +V V+    ++VAN GDSRAVL R  +
Sbjct: 96  LEKWKKALFNSFLRVDSEIESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKT 153
Query: 162 ENRKNMLVVAERLSVDHNVGVEEVRKEVEA 191
                    A  LSVDH    E+    +EA
Sbjct: 154 ---------ALPLSVDHKPDREDEAARIEA 174
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query243
2j4o_A 401 Mitogen-activated protein kinase kinase kinase 7-i 5e-39
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-32
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 3e-26
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 5e-24
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 6e-24
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 7e-24
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 9e-23
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 2e-22
3kdj_B 316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 2e-22
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-21
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-21
3d8k_A 377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-14
2isn_A 364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 3e-10
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 2e-05
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 2e-04
1txo_A237 Putative bacterial enzyme; serine/threonine protei 5e-04
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
 Score =  138 bits (349), Expect = 5e-39
 Identities = 47/231 (20%), Positives = 78/231 (33%), Gaps = 52/231 (22%)

Query: 25  LWHMDLKSHASGDYSIAVVQ---------ANSMLEDQGQVFTSPSAT-YVGVYDGHGGPE 74
            W  DL          A  +          +   ED    F S +     GV++G+ G  
Sbjct: 16  SWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYDGNR 75

Query: 75  ASRFITRHLFPFLHKFTTEQGGLSAEV---IKKAFDATEEEFLHLVKRSWSARPQIASV- 130
            + F+ + L   L           A+V   + +AFD  E  FL  +  + + +  + S  
Sbjct: 76  VTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQL 135

Query: 131 -----------------------------GSCCLVGVIAKDVLYVANLGDSRAVLGRRVS 161
                                        G+  +V V+  + LYVAN+G +RA+L +   
Sbjct: 136 PEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTV 195

Query: 162 ENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGI 212
           +  +       +L+VDH    E+    +  L  D   I      V  I G 
Sbjct: 196 DGLQ-----VTQLNVDHTTENEDELFRLSQLGLDAGKIK----QVGIICGQ 237
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query243
2irm_A 358 Mitogen-activated protein kinase kinase kinase 7 i 99.98
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 99.98
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 99.98
2j4o_A 401 Mitogen-activated protein kinase kinase kinase 7-i 99.97
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 99.97
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 99.97
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 99.97
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 99.97
2isn_A 364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 99.97
3d8k_A 377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 99.97
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 99.97
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 99.97
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 99.97
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 99.91
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 99.91
1txo_A237 Putative bacterial enzyme; serine/threonine protei 99.9
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.86
3rnr_A211 Stage II sporulation E family protein; structural 99.83
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 98.86
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 98.76
3f79_A255 Probable two-component response regulator; adaptor 98.33
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 97.98
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 96.05
3eq2_A394 Probable two-component response regulator; adaptor 91.11
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
Probab=99.98  E-value=1.1e-32  Score=248.19  Aligned_cols=185  Identities=18%  Similarity=0.200  Sum_probs=140.7

Q ss_pred             cccccCCCCCCCC------CccccccCCCC---CCCCcEEEee-CCCceEEEEEeCCCchHHHHHHHHHHHHHHHh-hhh
Q 026086           24 LLWHMDLKSHASG------DYSIAVVQANS---MLEDQGQVFT-SPSATYVGVYDGHGGPEASRFITRHLFPFLHK-FTT   92 (243)
Q Consensus        24 ~~~~~~~~~~~~~------~~s~~~~g~r~---~~ED~~~~~~-~~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~-~~~   92 (243)
                      ..|++++|.|...      ...++..|.|+   +|||++++.. .++..||||||||||+.+|++++++++..|.+ .+.
T Consensus         3 ~~~~~~~~~~~~~~~g~~~~~~~~~~G~r~~~~~nED~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~   82 (358)
T 2irm_A            3 KSWTDDLKVCNQTGVGEAINQIYKDDGRRCEGYESRDKKCLCISDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLN   82 (358)
T ss_dssp             -CCGGGSCBCTTEEEEEECCEEECSSSCEEECSSCCEEEEEEECSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTT
T ss_pred             CCcccccccCCCCCCcccccceeecCCCCCCCCCCCceEEEEECCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence            5799999999642      22234456665   5999998874 46789999999999999999999999999875 221


Q ss_pred             hc--CCChHHHHHHHHHHHHHHHHHHHHhhc----------c-----------CC----------CCcccccceEEEEEE
Q 026086           93 EQ--GGLSAEVIKKAFDATEEEFLHLVKRSW----------S-----------AR----------PQIASVGSCCLVGVI  139 (243)
Q Consensus        93 ~~--~~~~~~~l~~af~~~~~~~~~~~~~~~----------~-----------~~----------~~~~~sGtTa~v~~i  139 (243)
                      ..  ...+.++|+++|..+++.+.+...+..          .           ..          .....+|||++++++
T Consensus        83 ~~~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li  162 (358)
T 2irm_A           83 VCNTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALI  162 (358)
T ss_dssp             TCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEE
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEE
Confidence            11  112467899999999999876432100          0           00          022368999999999


Q ss_pred             ECCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCCHHHHHHHHHhCCCCCCeEEEeCCeeeecccccccccc
Q 026086          140 AKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQ  219 (243)
Q Consensus       140 ~~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~~~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~~tr~~  219 (243)
                      .++++|+|||||||+|+++...+ |   .|.+++||.||+|.++.|++||.++|+.    +.  .  .|+.|.+ +||++
T Consensus       163 ~~~~l~vAnvGDSRa~l~r~~~~-g---~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~----v~--~--~r~~g~l-lTRal  229 (358)
T 2irm_A          163 HRSHLYLGNIGNCRALLCKTDEH-D---TLTVTQLSVDHNLLNAEEAARLFRLGLM----AQ--N--FEGVPLY-STRCI  229 (358)
T ss_dssp             ESSEEEEEEESSCEEEEEECCTT-C---SCEEEECSCCCBTTSHHHHHHHHTTTCC----GG--G--GTTCTTC-BSBCE
T ss_pred             ECCEEEEEEcccCeEEEEEecCC-C---ceeeEeCCCCCCCCCHHHHHHHHHcCCe----Ee--c--cCcCCEE-cccCC
Confidence            99999999999999999998311 1   5679999999999999999999999752    22  1  2888877 99998


Q ss_pred             cc
Q 026086          220 AV  221 (243)
Q Consensus       220 g~  221 (243)
                      |+
T Consensus       230 Gd  231 (358)
T 2irm_A          230 GN  231 (358)
T ss_dssp             EC
T ss_pred             cC
Confidence            87
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 243
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 9e-11
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 7e-05
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (140), Expect = 9e-11
 Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 12/123 (9%)

Query: 37  DYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGG 96
           D   AV+   S LE            +  VYDGH G + +++   HL   +      +G 
Sbjct: 37  DAHTAVIGLPSGLESWS---------FFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGS 87

Query: 97  LSAEVIKKAFDATEEEFLHLVKRSWS---ARPQIASVGSCCLVGVIAKDVLYVANLGDSR 153
             A  ++   +     FL + +        +      GS  +  +I+    Y  N GDSR
Sbjct: 88  AGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSR 147

Query: 154 AVL 156
            +L
Sbjct: 148 GLL 150
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query243
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 99.92
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-34  Score=248.01  Aligned_cols=165  Identities=20%  Similarity=0.294  Sum_probs=134.7

Q ss_pred             CCccccccC-CCCCCCCcEEEeeC-----CCceEEEEEeCCCchHHHHHHHHHHHHHHHhhhhhcCC-------ChHHHH
Q 026086           36 GDYSIAVVQ-ANSMLEDQGQVFTS-----PSATYVGVYDGHGGPEASRFITRHLFPFLHKFTTEQGG-------LSAEVI  102 (243)
Q Consensus        36 ~~~s~~~~g-~r~~~ED~~~~~~~-----~~~~lf~VfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~-------~~~~~l  102 (243)
                      ..|++++.+ .|++|||++.+..+     ++..||||||||||+.+|+|++++|+..|.+.......       ...++|
T Consensus        21 ~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~al  100 (295)
T d1a6qa2          21 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGI  100 (295)
T ss_dssp             EEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHH
T ss_pred             eEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHHHHHHH
Confidence            467777764 58899999987732     35689999999999999999999999999875433221       234678


Q ss_pred             HHHHHHHHHHHHHHHHhhccCCCCcccccceEEEEEEECCEEEEEecccCcEEEEeeeCCCCcccceeeecCCCCCCCCC
Q 026086          103 KKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGV  182 (243)
Q Consensus       103 ~~af~~~~~~~~~~~~~~~~~~~~~~~sGtTa~v~~i~~~~l~vanvGDSRa~l~~~~~~~g~~~~~~~~~LT~dH~~~~  182 (243)
                      +++|..+++.+.......    .....+|||++++++.++++|+||+||||+|+++++         .+++||.||+|.+
T Consensus       101 ~~a~~~~~~~~~~~~~~~----~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~---------~~~~lT~dH~~~~  167 (295)
T d1a6qa2         101 RTGFLEIDEHMRVMSEKK----HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------KVHFFTQDHKPSN  167 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHT----TCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------EEEEECCCCCTTS
T ss_pred             HHHHHHHHHHHhhhhhhc----cCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc---------cceeeccccCccc
Confidence            888888888877654332    334578999999999999999999999999999987         8999999999999


Q ss_pred             HHHHHHHHHhCCCCCCeEEEeCCeeeecccccccccccc
Q 026086          183 EEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQHLIHQAV  221 (243)
Q Consensus       183 ~~E~~RI~~~~~~~~~~v~~~~G~~rv~g~l~~tr~~g~  221 (243)
                      +.|++||...|+    .+..  +  |+.|.|.+||++|+
T Consensus       168 ~~E~~Ri~~~gg----~v~~--~--r~~g~l~~tRa~Gd  198 (295)
T d1a6qa2         168 PLEKERIQNAGG----SVMI--Q--RVNGSLAVSRALGD  198 (295)
T ss_dssp             HHHHHHHHHTTC----CEET--T--EETTTBSCSBCEEC
T ss_pred             HHHHhhHhhcCC----cccc--c--ccCCceeeeeccCc
Confidence            999999999974    2333  2  99999999999884
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure