Citrus Sinensis ID: 026144

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240---
Protein Sequence
MKRMDLLCASPASTAICSSIDHRSMVRHNGHRPIDHHHHRHNRKPYAPCSSQLPIIPKPYSISNHDHHQKSSRKISAKQTDHLRRKSSADITDLNGDSSYGSSRYLLSDKPFTDWKSESDHHATALVRSQSAKPKLVTSSNDSPSLKSSSTNKSRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKAQFWPSSTSTSSSLSSPLVDMTSYRQN
Secondary Structure (PSIPRED)
ccccccccccccccEEEEcccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEcHHHHHHHHHHHcccccEEEEEEEccccEEEEEEEccHHHHHHHHHHcccEEEcccccccccccccccccHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccHcccccccccccccccccccccccccccccccccEEEEEEEEEcccHHHHHHHHHHHHccccEEEEEEccccEEEEEEcccHHHHHHHHHcccccEEcccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mkrmdllcaspastaicssidhrsmvrhnghrpidhhhhrhnrkpyapcssqlpiipkpysisnhdhhqkssrkiSAKQTDHLRrkssaditdlngdssygssryllsdkpftdwksesdhHATALVRsqsakpklvtssndspslkssstnksrdkVVVLRVSIHCKGCEGKVRKHISKMegvtsfsidlttkkvtiigdvtpsgvLASVssvkkaqfwpsststssslssplvdmtsyrqn
Flexible Loop (DISEMBL)
mkrmdllcaspasTAICSSIDHRSMVRHNGHRPIDHHHHRHNRKPYAPCSSQLPIIPKPYSISNHDHHQKSSRkisakqtdhlrrkssaditdlngdssygssryLLSDKPFTDWKSESDHHATAlvrsqsakpklvtssndspslkssstnksrdkvvVLRVSIhckgcegkvrkhiskmegvtsfsidlttKKVTIIGDVTPSGVLASVSSVKkaqfwpsststssslssplvdmtsyrqn
Low Complexity Region (SEG)
MKRMDLLCASPASTAICSSIDHRSMVrhnghrpidhhhhrhnrKPYAPCSSQLPIIPKPYSISNHDHHQKSSRKISAKQTDHLRRKSSADITDLNGDSSYGSSRYLLSDKPFTDWKSESDHHATALVRSQSAKPKLVtssndspslkssstnksRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKAQFWpsststssslssplVDMTSYRQN
Disordered region (IsUnstruct)
*************************************************************************************************************************************************************VVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVS*******************************
Disordered Region (DISOPRED)
********ASPASTAICS********************************************************************************************************************************************VVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKAQFW***********************
Disordered Region (DISEMBL)
MKRMDLLCASPASTAICSSIDHRSMVRHNGHR*************YAPCSSQLPIIPKPYSIS*************************ADITDLNGDSSYGSSRYLLSDKPFTDWKSESDHHATA******************************DKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK****************************
Disordered Region (DISPRO)
****DLLCASPASTAICSS**************************************************************************************************************************************SRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKK*QFWP**********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKRMDLLCASPASTAICSSIDHRSMVRHNGHRPIDHHHHRHNRKPYAPCSSQLPIIPKPYSISNHDHHQKSSRKISAKQTDHLRRKSSADITDLNGDSSYGSSRYLLSDKPFTDWKSESDHHATALVRSQSAKPKLVTSSNDSPSLKSSSTNKSRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKAQFWPSSTSTSSSLSSPLVDMTSYRQN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	243	2.2.26 [Sep-21-2011]
Q9SZN7	153	Heavy metal-associated is	no	no	0.259	0.411	0.4	2e-07

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 159 VVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVS--SVKK 216
           V ++V + C+GCE KVR+ +  M+GV+S +++    KVT++G V P+ V+A +S  + KK
Sbjct: 28  VEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGKK 87

Query: 217 AQFWP 221
            + WP
Sbjct: 88  VELWP 92

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	243
255580550	287	chloroplast-targeted copper chaperone, p	0.868	0.735	0.538	1e-60
225435100	259	PREDICTED: uncharacterized protein LOC10	0.851	0.799	0.583	1e-59
356541260	240	PREDICTED: uncharacterized protein LOC10	0.868	0.879	0.585	6e-54
297746145	235	unnamed protein product [Vitis vinifera]	0.753	0.778	0.561	3e-48
225439844	270	PREDICTED: uncharacterized protein LOC10	0.893	0.803	0.468	1e-43
255586894	289	chloroplast-targeted copper chaperone, p	0.946	0.795	0.426	5e-41
363807383	196	uncharacterized protein LOC100789886 [Gl	0.773	0.959	0.516	1e-40
449460977	241	PREDICTED: uncharacterized protein LOC10	0.806	0.813	0.424	1e-38
255646473	276	unknown [Glycine max]	0.930	0.818	0.427	5e-38
356548164	276	PREDICTED: uncharacterized protein LOC10	0.930	0.818	0.431	4e-37

>gi|255580550|ref|XP_002531099.1| chloroplast-targeted copper chaperone, putative [Ricinus communis] gi|223529295|gb|EEF31264.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/275 (53%), Positives = 173/275 (62%), Gaps = 64/275 (23%)

Query: 4   MDLLCASPASTAICSSIDHRSMVRHNGHRPIDHHHHRHNRKPYAPCSS--QLPIIPKPY- 60
           MDL C+SPASTAICSS+DHRS+V H+G RPIDH   RHN KPYA CSS  QLPI PKP  
Sbjct: 1   MDLFCSSPASTAICSSLDHRSVV-HHGTRPIDH---RHNSKPYATCSSSSQLPINPKPSY 56

Query: 61  ----------SISNHDHHQKSSR---KISAKQTDHLRRKSSADITDLNGDSSYGSSRYLL 107
                     S+   D H++SS      + KQ DHLRR+SSAD +D+   +  GSSR+LL
Sbjct: 57  FERSRRTTSSSVKQRDFHRESSADEYSAANKQQDHLRRRSSADASDVRTHT--GSSRHLL 114

Query: 108 SDK-PFTDWKSESDH-----------------------------------------HATA 125
           SDK P+ DW SESD                                          HA+A
Sbjct: 115 SDKVPYIDWISESDALILDRENQHPKARHATSKTAPARRSCSLAYYAHDDSVAKNGHASA 174

Query: 126 LVRSQSAKPKLVTSSNDSPSLKSSSTNKSRDKVVVLRVSIHCKGCEGKVRKHISKMEGVT 185
              +Q +    ++SSN SP+LKSSS+ +SRD+VVVL VSIHCKGCEGKVRKHISKMEGVT
Sbjct: 175 PFPTQISTKSKLSSSNVSPALKSSSSARSRDQVVVLWVSIHCKGCEGKVRKHISKMEGVT 234

Query: 186 SFSIDLTTKKVTIIGDVTPSGVLASVSSVKKAQFW 220
           SFSIDL TKKVT+IG+VTP GVLASVS VK AQ W
Sbjct: 235 SFSIDLATKKVTVIGNVTPLGVLASVSKVKNAQLW 269

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435100|ref|XP_002281496.1| PREDICTED: uncharacterized protein LOC100263778 [Vitis vinifera]

 Score =  235 bits (600), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/252 (58%), Positives = 168/252 (66%), Gaps = 45/252 (17%)

Query: 1   MKRMDLLCASPASTAICSSIDHRSMVRHNGHRPIDHHH----HRHNRKPYAP--CSSQLP 54
           MK +DL CASPASTAICSS+D RSMVR  G RPI+HH+     R   +P AP  CSS+LP
Sbjct: 1   MKGVDLFCASPASTAICSSMDQRSMVRR-GTRPINHHNPYLSDRRRSRPLAPVPCSSRLP 59

Query: 55  IIPKPYSISNHDHHQKSSRKISAKQTDHLRRKSSADITDLNGDSSYGSSRYLLSDKPFTD 114
           I P         HH KS RK SAKQTD LRRKSSAD  DL   S  GSSRYLLSD PF +
Sbjct: 60  ISPT-------LHHHKS-RKSSAKQTD-LRRKSSADKNDLT--SPPGSSRYLLSDTPFFN 108

Query: 115 WKSESDHHATALVRSQSAKPKLVT--------------------------SSNDSPSLKS 148
              +SD   +ALV +Q+A+P + T                          +SNDSP+L S
Sbjct: 109 LLPDSDR-VSALVPTQTARPLVPTQTTRPLVPTQTTRPLVPTKTARPRRLNSNDSPALVS 167

Query: 149 SSTNKSRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVL 208
           SS+ +S D+VVVL VS+HCKGCEGK+RKHISKMEGVTSFSIDL TKKVT+IGDVTP GVL
Sbjct: 168 SSSARSHDQVVVLWVSLHCKGCEGKLRKHISKMEGVTSFSIDLATKKVTVIGDVTPLGVL 227

Query: 209 ASVSSVKKAQFW 220
           ASVS VK AQ W
Sbjct: 228 ASVSRVKNAQLW 239

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541260|ref|XP_003539097.1| PREDICTED: uncharacterized protein LOC100807544 [Glycine max]

 Score =  216 bits (550), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/222 (58%), Positives = 157/222 (70%), Gaps = 11/222 (4%)

Query: 1   MKRMDLLCASPASTAICSSIDHRSMVRHNGHRPIDHHHHRHNRKPYAPCSSQLPIIPKPY 60
           MK +DL C+S ASTA+ SS+ HRSMV H   +  DH   R   + + PCSSQLPI PKPY
Sbjct: 1   MKGIDLFCSSSASTAVNSSMHHRSMV-HRSTKSFDHD--RRKSQLHVPCSSQLPINPKPY 57

Query: 61  SISNHDHHQKSSRKISAKQTDHLRRKSSADITDL--NGDSSYGSSRYLLSDKPFTDWKSE 118
           +    + H+KSS   + KQ   +RRKSSAD+ DL  +  +   S RYLL D PF +W SE
Sbjct: 58  NY--FEKHRKSSAS-ADKQNCDVRRKSSADVNDLYTHAGADGSSRRYLLGDAPFIEWVSE 114

Query: 119 SDHHATALVRSQ-SAKPKLVT-SSNDSPSLKSSSTNKSRDKVVVLRVSIHCKGCEGKVRK 176
           S+   +A+V SQ   K KLV    ND P+L+SSS+ +S+DKVVVLRVS+HCK CEGKVRK
Sbjct: 115 SNK-ISAMVPSQHDVKDKLVVMKRNDPPTLRSSSSARSKDKVVVLRVSLHCKACEGKVRK 173

Query: 177 HISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKAQ 218
           HISKMEGVTSFSID+ +KKV IIGDVTP GVLASVS VK AQ
Sbjct: 174 HISKMEGVTSFSIDMESKKVIIIGDVTPLGVLASVSKVKSAQ 215

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746145|emb|CBI16201.3| unnamed protein product [Vitis vinifera]

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/228 (56%), Positives = 147/228 (64%), Gaps = 45/228 (19%)

Query: 25  MVRHNGHRPIDHHH----HRHNRKPYAP--CSSQLPIIPKPYSISNHDHHQKSSRKISAK 78
           MVR  G RPI+HH+     R   +P AP  CSS+LPI P         HH KS RK SAK
Sbjct: 1   MVRR-GTRPINHHNPYLSDRRRSRPLAPVPCSSRLPISPT-------LHHHKS-RKSSAK 51

Query: 79  QTDHLRRKSSADITDLNGDSSYGSSRYLLSDKPFTDWKSESDHHATALVRSQSAKPKLVT 138
           QTD LRRKSSAD  DL   S  GSSRYLLSD PF +   +SD   +ALV +Q+A+P + T
Sbjct: 52  QTD-LRRKSSADKNDLT--SPPGSSRYLLSDTPFFNLLPDSDR-VSALVPTQTARPLVPT 107

Query: 139 --------------------------SSNDSPSLKSSSTNKSRDKVVVLRVSIHCKGCEG 172
                                     +SNDSP+L SSS+ +S D+VVVL VS+HCKGCEG
Sbjct: 108 QTTRPLVPTQTTRPLVPTKTARPRRLNSNDSPALVSSSSARSHDQVVVLWVSLHCKGCEG 167

Query: 173 KVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKAQFW 220
           K+RKHISKMEGVTSFSIDL TKKVT+IGDVTP GVLASVS VK AQ W
Sbjct: 168 KLRKHISKMEGVTSFSIDLATKKVTVIGDVTPLGVLASVSRVKNAQLW 215

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439844|ref|XP_002277868.1| PREDICTED: uncharacterized protein LOC100244737 [Vitis vinifera] gi|297741533|emb|CBI32665.3| unnamed protein product [Vitis vinifera]

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/271 (46%), Positives = 153/271 (56%), Gaps = 54/271 (19%)

Query: 1   MKRMDLLCASPASTAICSSID------------HRSMVRHNGHRPIDHHHHRHNRKPYA- 47
           MK +D+ CAS ASTAIC S++             R++ RHN   PI     R + K    
Sbjct: 1   MKGIDIFCASQASTAICVSMEPGSSSSSAIDQGGRAIDRHN---PIIRDARRSSVKTLTT 57

Query: 48  PCSSQLPIIPKPYSISNHDHHQKSSR----------KISAKQTDH----------LRRKS 87
           PCSSQ PI PKPY    H  HQK+ +          K SAK  D           + RKS
Sbjct: 58  PCSSQSPINPKPY----HQLHQKNRKTTGKSNDQIKKASAKNVDQYGKSSAKPLDMLRKS 113

Query: 88  SADITDLNGDSSYGSSRYLLSDKPFTDWKSESDHHATALVRSQSAKPKLVTSSNDSPSLK 147
           SA   DL   S  GSSRYLLS+ PF D   + D    ALV  +  K K V   +DSP LK
Sbjct: 114 SAKFVDLI--SPPGSSRYLLSEPPFFDVLPDFDP-VLALVPVEPKKAKAVNLDDDSPVLK 170

Query: 148 SSSTNKSR-----------DKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKV 196
            SS++ S            D+VVVLRVS+HCKGCEGK+RKHIS+MEGVTSF+ID   KKV
Sbjct: 171 PSSSSGSSDSKPSSSSGSADQVVVLRVSLHCKGCEGKLRKHISRMEGVTSFNIDFAAKKV 230

Query: 197 TIIGDVTPSGVLASVSSVKKAQFWPSSTSTS 227
           T++GDVTP GVLASVS VK AQ W  + ++S
Sbjct: 231 TVVGDVTPLGVLASVSKVKSAQLWTPAMASS 261

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586894|ref|XP_002534052.1| chloroplast-targeted copper chaperone, putative [Ricinus communis] gi|223525923|gb|EEF28330.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 163/291 (56%), Gaps = 61/291 (20%)

Query: 1   MKRMDLLCASPASTAICSSIDH---------------RSMVRHNGHRPIDHHHHRHNRK- 44
           MKR D+ CAS ASTAIC S+D                R++ RHN   PI     R  R  
Sbjct: 1   MKRRDMFCASQASTAICMSMDQPSSSSLSSSTAQLGGRNIDRHN---PIIRDQKRTPRAL 57

Query: 45  PYAPCSSQLPII-PKPYSI-------SNHDHHQKSSRKISAKQTDHLRR--KSSADITDL 94
           P APC+SQ P I P+PY +       +  + + +S +K S KQ D +R+  KSS+   D 
Sbjct: 58  PLAPCTSQTPPINPQPYHLLRRSKTSNTSNVNDQSKKKSSRKQNDLVRKDKKSSSKPDDG 117

Query: 95  N----------------------GD--SSYGSSRYLLSDKPFTDWKSESDHHATALVRSQ 130
           N                      GD  +  GSSRYLLSDK F D  S+ D    A+V +Q
Sbjct: 118 NKKDRSATVAKEVVVQRKSWAQPGDFITPPGSSRYLLSDKDFIDGLSDYDP-ILAMVPAQ 176

Query: 131 SAKPKLVTSSNDSPSLKS------SSTNKSRDKVVVLRVSIHCKGCEGKVRKHISKMEGV 184
           S +     +S+   S  S      +S+ +  ++VVVLRVS+HC+GCEGKVRKH+S+MEGV
Sbjct: 177 SKRFLTQAASDQQESTSSKTFSMSNSSERPSNQVVVLRVSLHCRGCEGKVRKHLSRMEGV 236

Query: 185 TSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKAQFW-PSSTSTSSSLSSPL 234
           +SFSID   KKVTI+GDV+P GVLASVS VK AQFW P++ +   S++S L
Sbjct: 237 SSFSIDFAAKKVTIVGDVSPLGVLASVSKVKSAQFWTPANPAAVPSVNSQL 287

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807383|ref|NP_001242379.1| uncharacterized protein LOC100789886 [Glycine max] gi|255647116|gb|ACU24026.1| unknown [Glycine max]

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/207 (51%), Positives = 138/207 (66%), Gaps = 19/207 (9%)

Query: 1   MKRMDLLCASPASTAICSSIDHRSMVRHNGHRPIDHHHHRHNRKPYAPCSSQLPIIPKPY 60
           MK +DL C+S  STA+ SS+ HRS ++ +  +  DH   R   + + PCSSQLPI PKPY
Sbjct: 1   MKGIDLFCSSSGSTAVTSSMHHRSTLQRST-KSFDHD--RRKSQLHVPCSSQLPINPKPY 57

Query: 61  SISNHDHHQKSSRKISAKQTDHLRRKSSADITDL---NGDSSYGSSR-YLLSDKPFTDWK 116
                + H+KSS   + KQ   +RRKSSAD+ D       S+ GSSR YL  D PF +W 
Sbjct: 58  ----FEKHRKSS---ADKQNWDMRRKSSADVNDFYTHTHASADGSSRRYLFGDGPFIEWV 110

Query: 117 SESDHHATALVRSQ----SAKPKLVTSSNDSPSLKSSSTNKSRDKVVVLRVSIHCKGCEG 172
           SES+   +A+V SQ         +V + ND P+L+SSS+ +S+D+VVVLRVS+HCK CEG
Sbjct: 111 SESNK-ISAMVPSQHDVKVKDKLVVKNRNDLPTLRSSSSARSKDQVVVLRVSLHCKACEG 169

Query: 173 KVRKHISKMEGVTSFSIDLTTKKVTII 199
           KVRKHISKMEGVTSFSID+ TKKV I+
Sbjct: 170 KVRKHISKMEGVTSFSIDMETKKVIIV 196

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460977|ref|XP_004148220.1| PREDICTED: uncharacterized protein LOC101212737 [Cucumis sativus] gi|449518919|ref|XP_004166483.1| PREDICTED: uncharacterized LOC101212737 [Cucumis sativus]

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/245 (42%), Positives = 138/245 (56%), Gaps = 49/245 (20%)

Query: 1   MKRMDLLCASPASTAICSSIDHRSMV--RHNGHRPIDHHHHRHNRKPYAPCSSQLPIIPK 58
           MK++D+ C S ASTA+ SS   R +    H+G R     H  ++RK  + CS+       
Sbjct: 1   MKKLDIFCKSRASTAVRSSFARRPLTGDAHSGDRRKGQLHFENHRKSTS-CST------- 52

Query: 59  PYSISNHDHHQKSSRKISAKQTDHLRRKSSADITDLNGDSSYGSSRYLLSDKPFTDWK-- 116
                           ++ K+ + LRRKS AD+ DL    S  S+RYLL D PF DW   
Sbjct: 53  ----------------LNRKELNDLRRKSCADVDDLKSPVSGSSARYLLGDSPFLDWFPA 96

Query: 117 -----------------SESDHHATALVRSQSAKP----KLVTSSNDSPSLKSSSTNKSR 155
                            S++   +  L RS + +     K  +S  +SP LK+ S  +SR
Sbjct: 97  VSGEEVPALMPEKRKIISDNSQKSFLLNRSLTVREYGGLKSPSSVLESPVLKTPSLTQSR 156

Query: 156 DKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK 215
           D+VVVL+VS++C+GCE KV+KHISKMEGVTS+S+D TTKKVTIIGD+TP  VLASVS VK
Sbjct: 157 DQVVVLKVSLNCRGCEKKVKKHISKMEGVTSYSVDFTTKKVTIIGDITPFDVLASVSKVK 216

Query: 216 KAQFW 220
            AQFW
Sbjct: 217 SAQFW 221

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646473|gb|ACU23715.1| unknown [Glycine max]

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/269 (42%), Positives = 149/269 (55%), Gaps = 43/269 (15%)

Query: 1   MKRMDLLCASPASTAICSSIDHRSMVRHN----GHRPIDHHHHRHN-------RKPYAPC 49
           MKR+D+ CAS ASTAIC S+D  S    N    G R ID H+   N       +   APC
Sbjct: 1   MKRIDIFCASQASTAICLSMDQASCSSSNTILLGGRTIDRHNPIINDSRRSTSKSLTAPC 60

Query: 50  SS-QLPIIPKPY--------------SISNHDHHQKSSRKISAKQTDHLRRKSSADITDL 94
           SS Q PI PKPY              +   HD+ +K  R  + K T+H+   +S  I D+
Sbjct: 61  SSSQSPINPKPYHELHKAKKNSSSKNATKGHDNQKK--RSTAEKLTEHVTN-TSKPIDDI 117

Query: 95  NGDSSY----------GSSRYLLSDKPFTDWKSESD--HHATALVRSQSAKPKLVTSSND 142
              S            GS+R LLSD    D  S+ D     T ++ +++++      +N 
Sbjct: 118 VPRSWLKPPADLITPPGSTRSLLSDTALLDGSSDYDPVLALTTMINNKTSQAVHQDEANP 177

Query: 143 SPSLKSSSTNKS--RDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIG 200
              L SS   KS   D+VVVLRVS+HCKGCEGKVRKH+S+M+GVTSF+ID  +KKVT++G
Sbjct: 178 VSKLSSSFHPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFASKKVTVVG 237

Query: 201 DVTPSGVLASVSSVKKAQFWPSSTSTSSS 229
           DVTP  VLAS+S VK AQ WP+S S   S
Sbjct: 238 DVTPLSVLASISKVKNAQLWPASASAVES 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548164|ref|XP_003542473.1| PREDICTED: uncharacterized protein LOC100813295 [Glycine max]

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/269 (43%), Positives = 150/269 (55%), Gaps = 43/269 (15%)

Query: 1   MKRMDLLCASPASTAICSSIDHRSMVRHN----GHRPIDHHHHRHN-------RKPYAPC 49
           MKR+D+ CAS ASTAIC S+D  S    N    G R ID H+   N       +   APC
Sbjct: 1   MKRIDIFCASQASTAICLSMDQASCSSSNTILLGGRTIDRHNPIINDSRRSTSKSLTAPC 60

Query: 50  SS-QLPIIPKPY--------------SISNHDHHQKSSRKISAKQTDHLRRKSSADITDL 94
           SS Q PI PKPY              +   HD+ +K  R  + K T+H+   +S  I D+
Sbjct: 61  SSSQSPINPKPYHELHKAKKNSSSKNATKGHDNQKK--RSTAEKLTEHVTN-TSKPIDDI 117

Query: 95  NGDSSY----------GSSRYLLSDKPFTDWKSESD--HHATALVRSQSAKPKLVTSSND 142
              S            GS+R LLSD    D  S+ D     T ++ +++++      +N 
Sbjct: 118 VPRSWLKPPADLITPPGSTRSLLSDTALLDGSSDYDPVLALTTMINNKTSQAVHQDEANP 177

Query: 143 SPSLKSSSTNKSR--DKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIG 200
              L SSS  KS   D+VVVLRVS+HCKGCEGKVRKH+S+M+GVTSF+ID  +KKVT++G
Sbjct: 178 VSKLSSSSHPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFASKKVTVVG 237

Query: 201 DVTPSGVLASVSSVKKAQFWPSSTSTSSS 229
           DVTP  VLAS+S VK AQ WP+S S   S
Sbjct: 238 DVTPLSVLASISKVKNAQLWPASASAVES 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	243
TAIR|locus:2181718	319	NAKR1 "SODIUM POTASSIUM ROOT D	0.267	0.203	0.707	1.7e-27
TAIR|locus:2049731	259	NAKR2 "AT2G37390" [Arabidopsis	0.465	0.436	0.438	3.6e-27
TAIR|locus:2065526	265	AT2G28660 "AT2G28660" [Arabido	0.567	0.520	0.461	2.5e-26
TAIR|locus:2083966	248	NAKR3 "SODIUM POTASSIUM ROOT D	0.481	0.471	0.447	1.9e-24
TAIR|locus:2094864	140	AT3G24450 "AT3G24450" [Arabido	0.271	0.471	0.5	1.8e-14
TAIR|locus:2205288	106	ATX1 "homolog of anti-oxidant	0.263	0.603	0.476	5e-12
TAIR|locus:2078461	121	CCH "copper chaperone" [Arabid	0.263	0.528	0.461	2.8e-11
TAIR|locus:2180265	352	AT5G27690 [Arabidopsis thalian	0.251	0.173	0.435	6.9e-10
TAIR|locus:4515103273	166	AT3G56891 [Arabidopsis thalian	0.259	0.379	0.437	7.6e-09
TAIR|locus:2121199	153	FP6 "farnesylated protein 6" [	0.263	0.418	0.378	1.2e-08

TAIR|locus:2181718 NAKR1 "SODIUM POTASSIUM ROOT DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 254 (94.5 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
 Identities = 46/65 (70%), Positives = 56/65 (86%)

Query:   156 DKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK 215
             D+VVVLRVS+HCKGC GKV+KH+SK++GVTS++ID   KKVT+ GDVTP  VLAS+S VK
Sbjct:   249 DQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVK 308

Query:   216 KAQFW 220
              AQFW
Sbjct:   309 NAQFW 313

GO:0009507 "chloroplast" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009908 "flower development" evidence=IMP

GO:0010015 "root morphogenesis" evidence=IMP

GO:0010233 "phloem transport" evidence=IMP

GO:0055078 "sodium ion homeostasis" evidence=IMP

TAIR|locus:2049731 NAKR2 "AT2G37390" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
 Identities = 53/121 (43%), Positives = 73/121 (60%)

Query:   101 GSSRYLLSDKPFTDWKS-ESDHHATALVRSQSAKPKLVXXXXXXXXXXXXXXXXXRDKVV 159
             GS+RYLL   P +   S + D   T    + + + K +                   +VV
Sbjct:   131 GSTRYLLGSDPDSITGSVDQDPAKTVEAEAPAGEDKTLTEKKTTCGDTD-------QQVV 183

Query:   160 VLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKAQF 219
             VL+VS+HC+GCEGKVRKH+++M+GVTSF+ID   KKVT+ GD+TP  +L S+S VK AQF
Sbjct:   184 VLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKNAQF 243

Query:   220 W 220
             W
Sbjct:   244 W 244

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2065526 AT2G28660 "AT2G28660" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 71/154 (46%), Positives = 85/154 (55%)

Query:    83 LRRKSSADITDLNGDSSY---GSSRYLLSD-KPFTD-----WKSESDHHATALVRSQSAK 133
             +RRKSSAD++DL    S     SSRYLL D K         W S        L R ++  
Sbjct:    93 IRRKSSADVSDLRRSRSSLLSSSSRYLLKDHKSLKGDDKDLWLSSDRSKDLILYRDRNVT 152

Query:   134 PKLVXXXXXXXXXXXXXXX-------XXRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTS 186
                                          D+VVVLRVSIHCKGCEGKVRKHISKMEGVTS
Sbjct:   153 SSASSSSSSSSSSFSSSVTNVSSPAPSTDDQVVVLRVSIHCKGCEGKVRKHISKMEGVTS 212

Query:   187 FSIDLTTKKVTIIGDVTPSGVLASVSSVKKAQFW 220
             ++IDL TKKVT++G +TP G++ S+S VK AQ W
Sbjct:   213 YTIDLATKKVTVVGKITPVGLVESISKVKFAQLW 246

GO:0005507 "copper ion binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2083966 NAKR3 "SODIUM POTASSIUM ROOT DEFECTIVE 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
 Identities = 55/123 (44%), Positives = 73/123 (59%)

Query:   101 GSSRYLLSDKPFTDWKSESDHHATALVRSQSAKPKLVXXXXXXXXXXXXXXXXXRDKVVV 160
             GS+RYLL   P +     +     A   S+++ PK                    D+VVV
Sbjct:   115 GSTRYLLGSDPVS-LAGSTGQDTVATEESEASAPK--RGSSGPVEEKKKSSGSGSDQVVV 171

Query:   161 LRVSIHC--KGCEGKVRKHISKME-GVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
             LRVS+HC  +GC+GKV+KH+SKM+ GVTSF+ID  +KKVT+ GD+TP  VL  +S VK A
Sbjct:   172 LRVSLHCHCRGCQGKVKKHLSKMQVGVTSFNIDFASKKVTVTGDITPLEVLGCLSKVKNA 231

Query:   218 QFW 220
             QFW
Sbjct:   232 QFW 234

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2094864 AT3G24450 "AT3G24450" [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 33/66 (50%), Positives = 47/66 (71%)

Query:   155 RDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV 214
             + K+V L+VS+HC GC  KV KHISK++GVT + ++L +KKV + G++ P  VL S+  V
Sbjct:    72 KPKIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNILPVDVLESICKV 131

Query:   215 KKAQFW 220
             K AQ W
Sbjct:   132 KNAQLW 137

GO:0005507 "copper ion binding" evidence=ISS

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2205288 ATX1 "homolog of anti-oxidant 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 31/65 (47%), Positives = 45/65 (69%)

Query:   157 KVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-K 215
             + VVLRV++ C+GC G V++ + KMEGV SF +D+  +KVT+ G+V P  VL +V+   K
Sbjct:    33 QTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGK 92

Query:   216 KAQFW 220
             K  FW
Sbjct:    93 KTAFW 97

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000785 "chromatin" evidence=IDA

TAIR|locus:2078461 CCH "copper chaperone" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 30/65 (46%), Positives = 42/65 (64%)

Query:   157 KVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-K 215
             + VVL+V + C+GC G V + + KMEGV SF ID+  +KVT+ G+V P  V  +VS   K
Sbjct:     3 QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGK 62

Query:   216 KAQFW 220
             K  +W
Sbjct:    63 KTSYW 67

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0009507 "chloroplast" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

GO:0000302 "response to reactive oxygen species" evidence=IGI

GO:0006827 "high-affinity iron ion transport" evidence=IGI

GO:0006878 "cellular copper ion homeostasis" evidence=IMP;TAS

GO:0007568 "aging" evidence=IEP

GO:0016531 "copper chaperone activity" evidence=ISS

TAIR|locus:2180265 AT5G27690 [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 6.9e-10, P = 6.9e-10
 Identities = 27/62 (43%), Positives = 45/62 (72%)

Query:   160 VLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQ 218
             VLRVSIHC+GC+ K++K +SK++GV + +ID+  +KVT+IG+V P  ++  +    + A+
Sbjct:    33 VLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAE 92

Query:   219 FW 220
              W
Sbjct:    93 LW 94

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:4515103273 AT3G56891 [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 28/64 (43%), Positives = 40/64 (62%)

Query:   158 VVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KK 216
             +V L V + CKGCE KVR+ ISK++GV +  ID+  +KVT+ G V    VL  V    + 
Sbjct:    17 IVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRT 76

Query:   217 AQFW 220
             A++W
Sbjct:    77 AEYW 80

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2121199 FP6 "farnesylated protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 25/66 (37%), Positives = 44/66 (66%)

Query:   157 KVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVS--SV 214
             + V ++V + C+GCE KVR+ +  M+GV+S +++    KVT++G V P+ V+A +S  + 
Sbjct:    26 QTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTG 85

Query:   215 KKAQFW 220
             KK + W
Sbjct:    86 KKVELW 91

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0010286 "heat acclimation" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	243
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	4e-12
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	5e-12
COG2608	71	COG2608, CopZ, Copper chaperone [Inorganic ion tra	6e-05

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 59.2 bits (144), Expect = 4e-12
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 160 VLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD--VTPSGVLASVSSVKK 216
            L V  + C GC  K+ K + K+ GV S  +DL T K T+  D  V+P  +L ++     
Sbjct: 1   ELSVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIEDAGY 60

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 59.2 bits (144), Expect = 5e-12
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 159 VVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKAQ 218
            +    + C GC  KV K +SK+ GV+S S+DL T KVT+ GD  P  +     +++KA 
Sbjct: 1   TLRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKAG 60

Query: 219 F 219
           +
Sbjct: 61  Y 61

Length = 62

>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]

 Score = 39.7 bits (93), Expect = 6e-05
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 159 VVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
             L+V  + C  C   V K + +++GV S  +DL     T+  D     + A + +++ A
Sbjct: 4   TTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDA 63

Length = 71

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	243
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.2
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.1
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	99.07
KOG4656	247	consensus Copper chaperone for superoxide dismutas	98.64
PLN02957	238	copper, zinc superoxide dismutase	98.11
PRK10671	834	copA copper exporting ATPase; Provisional	98.01
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	97.59
TIGR00003	68	copper ion binding protein. This model describes a	97.37
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.81
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.55
PRK10671	834	copA copper exporting ATPase; Provisional	96.22
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	95.73
TIGR02052	92	MerP mercuric transport protein periplasmic compon	88.9

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.20  E-value=8.9e-11  Score=82.91  Aligned_cols=55  Identities=35%  Similarity=0.654  Sum_probs=51.2

Q ss_pred             EEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh
Q 026144          160 VLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV  214 (243)
Q Consensus       160 ~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~  214 (243)
                      +|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++|+|.++   +++++|.++|++.
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~   59 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKA   59 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHT
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHh
Confidence            58998 9999999999999999999999999999999999987   4669999999985

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.10  E-value=5.1e-10  Score=82.68  Aligned_cols=64  Identities=23%  Similarity=0.418  Sum_probs=56.3

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeec
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFW  220 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~  220 (243)
                      ....|+|+ |+|.+|+.+|+++|.+++||.+|.||+..+.+.|.++   ++.++|..+|++. |.+..+
T Consensus         2 ~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~~   70 (71)
T COG2608           2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEEI   70 (71)
T ss_pred             ceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeeec
Confidence            46789999 9999999999999999999999999999987777654   7899999999985 776543

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.07  E-value=7.7e-10  Score=81.95  Aligned_cols=67  Identities=40%  Similarity=0.804  Sum_probs=61.4

Q ss_pred             CceeEEEEEEeechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh--cCeeecC
Q 026144          155 RDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV--KKAQFWP  221 (243)
Q Consensus       155 ~~~~v~LkV~M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~--~~Ael~~  221 (243)
                      ..+..+++|.|+|.+|+.+|++.|..++||.++.+|...++|+|.|.+++..|++.|++.  +.+++|.
T Consensus         3 ~~~~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~~k~~~~~~   71 (73)
T KOG1603|consen    3 PIKTVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTGGKRAELWK   71 (73)
T ss_pred             CccEEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHHhcCCCceEEec
Confidence            456788999999999999999999999999999999999999999999999999999984  6777774

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=98.64  E-value=8.7e-08  Score=84.83  Aligned_cols=71  Identities=18%  Similarity=0.389  Sum_probs=64.7

Q ss_pred             CceeEEEEEEeechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeecCCCCC
Q 026144          155 RDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQFWPSSTS  225 (243)
Q Consensus       155 ~~~~v~LkV~M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael~~~~~~  225 (243)
                      ...+.+|.|+|+|++|++.|+..|..++||++|+||+..+.|.|.+.+.+.+|...|+.. .+|.|.+.-.+
T Consensus         5 ~~~~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le~tGr~Avl~G~G~p   76 (247)
T KOG4656|consen    5 DTYEAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLENTGRDAVLRGAGKP   76 (247)
T ss_pred             CceeEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHHhhChheEEecCCch
Confidence            456789999999999999999999999999999999999999999999999999999985 78888766543

>PLN02957 copper, zinc superoxide dismutase

Probab=98.11  E-value=1.8e-05  Score=70.76  Aligned_cols=72  Identities=21%  Similarity=0.498  Sum_probs=63.2

Q ss_pred             CceeEEEEEEeechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeecCCCCCC
Q 026144          155 RDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQFWPSSTST  226 (243)
Q Consensus       155 ~~~~v~LkV~M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael~~~~~~~  226 (243)
                      +++++.|.|.|+|..|+.+|++.|.+++||..+.+++..++++|.+......|...|++. |.++++....+.
T Consensus         4 ~~~~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~~   76 (238)
T PLN02957          4 PELLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKARLIGQGDPE   76 (238)
T ss_pred             CcEEEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHHHcCCcEEEecCCCcc
Confidence            456778888899999999999999999999999999999999999888888999999985 888888665443

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.01  E-value=2.1e-05  Score=81.28  Aligned_cols=62  Identities=13%  Similarity=0.382  Sum_probs=54.7

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeec
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQFW  220 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael~  220 (243)
                      ++++|.|+ |+|.+|+.+|+++|.+++||..+.||+.  +.+|++..+.+.+.++|++. |.+++.
T Consensus         3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~~~i~~~i~~~Gy~~~~~   66 (834)
T PRK10671          3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASAEALIETIKQAGYDASVS   66 (834)
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCHHHHHHHHHhcCCccccc
Confidence            57899999 9999999999999999999999999994  55666778999999999985 877764

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.59  E-value=0.00016  Score=74.26  Aligned_cols=62  Identities=26%  Similarity=0.588  Sum_probs=54.2

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CC-HHHHHHHHHhh-cCeee
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VT-PSGVLASVSSV-KKAQF  219 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~-~~eI~~aIeK~-~~Ael  219 (243)
                      .+..|.|+ |+|..|+.+|| +|++++||+.+.||+.++++.|.++   .+ .+++...+++. |.+..
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~~   69 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSARL   69 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCccccc
Confidence            45789999 99999999999 9999999999999999999999875   34 68899999985 76543

>TIGR00003 copper ion binding protein

Probab=97.37  E-value=0.0023  Score=41.00  Aligned_cols=57  Identities=21%  Similarity=0.440  Sum_probs=47.5

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHh
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSS  213 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK  213 (243)
                      +...+.|. |+|..|+..+++.+..++|+..+.+++..+.+.|.++   .....+...+..
T Consensus         2 ~~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   62 (68)
T TIGR00003         2 QKFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILD   62 (68)
T ss_pred             cEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHH
Confidence            34678999 9999999999999999999999999999999988863   456666665544

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.81  E-value=0.0017  Score=67.83  Aligned_cols=76  Identities=24%  Similarity=0.425  Sum_probs=68.1

Q ss_pred             eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec--CCHHHHHHHHHhh-cCeeecCCCCCCCCCCCCCCcccccc
Q 026144          165 IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD--VTPSGVLASVSSV-KKAQFWPSSTSTSSSLSSPLVDMTSY  240 (243)
Q Consensus       165 M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~--v~~~eI~~aIeK~-~~Ael~~~~~~~~~~~~~~~~~m~~~  240 (243)
                      |+|..|.+.|++++.+.+||.++.|++..+..+|.++  ++++.|.+.|+.. |.+++..+.+...+--.+.+-||+|.
T Consensus         3 mtc~ac~~si~~~~~~~~g~~~i~vsl~~~~~~v~~~~~~~~~~i~~~ied~gf~~~~~~~~~~~~~~~~l~v~GmtC~   81 (951)
T KOG0207|consen    3 MTCSACSNSIEKAISRKPGVQKIEVSLAQKRANVSYDNIVSPESIKETIEDMGFEASLLSDSEITASKCYLSVNGMTCA   81 (951)
T ss_pred             ccHHHHhhhHHHHHhcCCCceeEEEEeccccceEEEeeccCHHHHHHHhhcccceeeecccCccccceeEEEecCceeH
Confidence            8999999999999999999999999999999999876  7899999999984 99999988877777666677788875

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.55  E-value=0.0052  Score=64.39  Aligned_cols=83  Identities=24%  Similarity=0.440  Sum_probs=68.7

Q ss_pred             eEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeecCCCCCCC-CCCC
Q 026144          158 VVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFWPSSTSTS-SSLS  231 (243)
Q Consensus       158 ~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~~~~~~~~-~~~~  231 (243)
                      +-.|.|+ |+|..|.+.|++.|++++||+++.|.+...+..|.++   +.++.+.+.+++. |.+++.......+ ...-
T Consensus        70 ~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~~~~~e~ie~~gf~a~~i~~~~~~~~~~i~  149 (951)
T KOG0207|consen   70 KCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSPDSIAESIEDLGFSAELIESVNGNSNQKIY  149 (951)
T ss_pred             eeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCchhHHHHHHhcCccceehhcccCCCCCcEE
Confidence            6789999 9999999999999999999999999999999999876   7889999999985 8888776554333 3455


Q ss_pred             CCCcccccc
Q 026144          232 SPLVDMTSY  240 (243)
Q Consensus       232 ~~~~~m~~~  240 (243)
                      +-+-||.|.
T Consensus       150 L~v~g~~c~  158 (951)
T KOG0207|consen  150 LDVLGMTCA  158 (951)
T ss_pred             EEeeccccc
Confidence            555566664

>PRK10671 copA copper exporting ATPase; Provisional

Probab=96.22  E-value=0.014  Score=60.64  Aligned_cols=65  Identities=20%  Similarity=0.444  Sum_probs=55.4

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeecC
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQFWP  221 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael~~  221 (243)
                      ..+.|.|. |+|..|+..|++.|.+++||..+.+++..+++.+.+..+..++...+++. |.+.++.
T Consensus        99 ~~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~~~Gy~a~~~~  165 (834)
T PRK10671         99 DSQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAIE  165 (834)
T ss_pred             ceEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHHhcCCCccccc
Confidence            35778899 99999999999999999999999999999998887667788888888874 6665543

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=95.73  E-value=0.031  Score=57.62  Aligned_cols=66  Identities=20%  Similarity=0.303  Sum_probs=52.0

Q ss_pred             CceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecC-CHHHHHHHHHhh-cCeeec
Q 026144          155 RDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDV-TPSGVLASVSSV-KKAQFW  220 (243)
Q Consensus       155 ~~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v-~~~eI~~aIeK~-~~Ael~  220 (243)
                      ....+.+.|+ |+|.+|+.++++.+.+++||..+.+++.++++.+.++. ...++...+++. |.+..+
T Consensus        51 ~~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~~~I~~aI~~~Gy~a~~~  119 (741)
T PRK11033         51 SGTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGFSLRDE  119 (741)
T ss_pred             CCceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccchHHHHHHHHhcccccccc
Confidence            3446778899 99999999999999999999999999999998887642 125666666663 655443

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=88.90  E-value=5.9  Score=27.75  Aligned_cols=56  Identities=21%  Similarity=0.404  Sum_probs=42.0

Q ss_pred             eEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHh
Q 026144          158 VVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSS  213 (243)
Q Consensus       158 ~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK  213 (243)
                      .+.+.+. +.|..|...++..+...+|+..+.+++....+.+...   .....+...++.
T Consensus        24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (92)
T TIGR02052        24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTD   83 (92)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHh
Confidence            3456678 9999999999999999999988889988888766532   344444444444

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	243
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	4e-19
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	8e-16
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	2e-13
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	5e-12
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	2e-11
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	3e-08
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	7e-06
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	5e-07
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	5e-07
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	5e-07
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	7e-07
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	1e-06
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	9e-05
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	1e-06
2kkh_A	95	Putative heavy metal transporter; zinc transport,	4e-06
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	1e-05
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	1e-05
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	3e-05
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	2e-05
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	2e-05
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	2e-05
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	2e-05
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	3e-05
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	3e-05
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	5e-05
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	7e-05
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	7e-05
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	8e-05
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	9e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-05
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	9e-05
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	1e-04
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	2e-04
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	2e-04
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	2e-04
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	2e-04

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 78.3 bits (193), Expect = 4e-19
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 1/94 (1%)

Query: 140 SNDSPSLKSSSTNKSRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTII 199
           S+ S  + S S N+     +   V + C+ C   VRK +  + GV    + L  + V + 
Sbjct: 2   SSGSSGMASDSGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVH 61

Query: 200 GDVTPSGVLASVSSV-KKAQFWPSSTSTSSSLSS 232
             +    V A +    ++A      +    +   
Sbjct: 62  TTLPSQEVQALLEGTGRQAVLKGMGSGQLQNSGP 95

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 68.9 bits (169), Expect = 8e-16
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 159 VVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKA 217
               V + C GC   V + ++K+ GV  + IDL  KKV I  + +   +LA++    K  
Sbjct: 4   HEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTV 62

Query: 218 QFW 220
            + 
Sbjct: 63  SYL 65

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 62.5 bits (152), Expect = 2e-13
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 157 KVVVLRVSIHCKGCEGKVRKHISKME-GVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK 215
           K     V + C GC G V K ++K+E  V+   I L  + V +   +    +L  +    
Sbjct: 5   KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTG 64

Query: 216 K 216
           K
Sbjct: 65  K 65

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 62.4 bits (151), Expect = 5e-12
 Identities = 10/58 (17%), Positives = 29/58 (50%)

Query: 159 VVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKK 216
               + +HC+ C   ++  +  + G+ S + D+  + +++   V PS ++ ++ +  K
Sbjct: 8   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGK 65

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 61.3 bits (148), Expect = 2e-11
 Identities = 9/55 (16%), Positives = 28/55 (50%)

Query: 159 VVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSS 213
               + +HC+ C   ++  +  + G+ S + D+  + +++   V PS ++ ++ +
Sbjct: 9   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRN 63

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 51.6 bits (123), Expect = 3e-08
 Identities = 18/109 (16%), Positives = 45/109 (41%), Gaps = 4/109 (3%)

Query: 138 TSSNDSPSLKSSSTNKSRDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKV 196
           +++ +  + ++     S    + LR+  +HCK C   + ++I ++ GV S  + L  K  
Sbjct: 1   SANQNFNNSETLGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTA 60

Query: 197 TIIGD---VTPSGVLASVSSVKKAQFWPSSTSTSSSLSSPLVDMTSYRQ 242
            +  D    +P  +  ++ ++    F  S    +    +     +S+  
Sbjct: 61  QVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHSP 109

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 44.6 bits (105), Expect = 7e-06
 Identities = 16/94 (17%), Positives = 41/94 (43%), Gaps = 4/94 (4%)

Query: 122 HATALVRSQSAKPKLVTSSNDSPSLKSSSTNKSRDKVVVLRVS-IHCKGCEGKVRKHISK 180
             +    ++ +     +SS+ SP     +  +      ++ ++ + C  C   +   IS+
Sbjct: 87  KVSLPDGAEGSGTDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQ 146

Query: 181 MEGVTSFSIDLTTKKVTIIGD---VTPSGVLASV 211
           +EGV   S+ L     T++ +   ++P  + A++
Sbjct: 147 LEGVQQISVSLAEGTATVLYNPAVISPEELRAAI 180

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 44.9 bits (107), Expect = 5e-07
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 158 VVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASV 211
           ++ L+V  + C  C   V K + K+ GV    + L   +  + G   P  ++ +V
Sbjct: 1   MLKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAV 55

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71

 Score = 45.1 bits (107), Expect = 5e-07
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 8/59 (13%)

Query: 160 VLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
           V RV  + C  C  K  +++ ++EGVT   ++    K+T+ G+       AS+  V++A
Sbjct: 6   VYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGE-------ASIQQVEQA 57

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 45.6 bits (108), Expect = 5e-07
 Identities = 9/66 (13%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 148 SSSTNKSRDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSG 206
                  +   +   V  + C  C G ++  I K     +   D  ++ V + G    + 
Sbjct: 13  GRENLYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAH 72

Query: 207 VLASVS 212
           +   ++
Sbjct: 73  IAEIIT 78

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 44.3 bits (105), Expect = 7e-07
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 159 VVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVS 212
           + L V  I C+ C   V K +   +   +  +DLT+KKVTI   +    +  +++
Sbjct: 3   IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA 57

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 154 SRDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVS 212
           S  K + ++VS + C  C  ++ K + +M GVT  +++L T+ V +I D   +G  A   
Sbjct: 3   SEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQE 62

Query: 213 SVKKAQF 219
            ++K  +
Sbjct: 63  KIEKLGY 69

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 40.5 bits (95), Expect = 9e-05
 Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 3/49 (6%)

Query: 166 HCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTII---GDVTPSGVLASV 211
            C  C  ++ K ++K+EGV +  ++   + VT+     + + S +  +V
Sbjct: 84  TCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAV 132

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 43.8 bits (104), Expect = 1e-06
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 159 VVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD--VTPSGVLASV 211
              +V  I C  C  K+ K + ++EGV+   + +  K V +  D   T   +  ++
Sbjct: 3   ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEAL 58

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 9/74 (12%), Positives = 27/74 (36%), Gaps = 1/74 (1%)

Query: 147 KSSSTNKSRDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPS 205
           +       + +     V  I C      +   +  ++GV  +S+ + ++ V ++ D    
Sbjct: 6   EEEKKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLI 65

Query: 206 GVLASVSSVKKAQF 219
                  ++ +A+ 
Sbjct: 66  SPFQIAKALNEARL 79

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK 215
           +   L+V  + C+ C   V   + +++GV++  ++L   KV +  D     V  SV  + 
Sbjct: 2   EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFD--ADKV--SVKDIA 57

Query: 216 KA 217
            A
Sbjct: 58  DA 59

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 5/85 (5%)

Query: 159 VVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
             L++  + C  C   + +++ K  GV S  + L   K  I  D      L     ++  
Sbjct: 6   CFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDL 65

Query: 218 QFWPSSTSTSSSLSSPLV----DMT 238
            F  +     +     +      MT
Sbjct: 66  GFEAAVMEDYAGSDGNIELTITGMT 90

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 4/68 (5%)

Query: 150 STNKSRDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPS 205
                 D  + L ++ + C  C   +   +++  G+T  S+ L T K  +  D   + P 
Sbjct: 73  EDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPR 132

Query: 206 GVLASVSS 213
            ++  +  
Sbjct: 133 DIIKIIEE 140

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90

 Score = 41.3 bits (97), Expect = 2e-05
 Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 156 DKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASV 211
           D      +  +HCK C   +   +S ++ V+S  + L  +   ++ +   VTP  +  ++
Sbjct: 2   DSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAI 61

Query: 212 SSV 214
            +V
Sbjct: 62  EAV 64

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 158 VVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKK--VTIIGDVTPSGVLASV 211
           +  L+++ + C  C   V++ + K+ GV S  +        + I+   +P  + A+V
Sbjct: 1   MTHLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAV 57

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK 215
           + V L V  + C  C   V+K ISK+EGV+   +   T++  +  D   + V     +  
Sbjct: 3   QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62

Query: 216 KA 217
            A
Sbjct: 63  DA 64

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK 215
             V + V  + C  C   + + I K+ GV    + L  K  TII D  P     +  +++
Sbjct: 8   NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYD--PKLQ--TPKTLQ 63

Query: 216 KA 217
           +A
Sbjct: 64  EA 65

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 159 VVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASV 211
           V + V  + C  C   + + I K+ GV    + L  K  TII D    TP  +  ++
Sbjct: 4   VTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAI 60

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 5/62 (8%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK 215
           + + L+V  + C  C   +   + ++ GV    + L    V +  D   S V  ++  + 
Sbjct: 5   EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTID--SSVV--TLKDIV 60

Query: 216 KA 217
             
Sbjct: 61  AV 62

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 4/59 (6%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASV 211
           +  V+ +  + C  C   +   ISK  GV S  + L     T+  D    +P  +  ++
Sbjct: 3   QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAI 61

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71

 Score = 39.3 bits (92), Expect = 7e-05
 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 166 HCKGCEGKVRKHISKMEGVTSFSIDLTTKK--VTIIGDVTPSGVLASV 211
            C  C   + + I+K+ GV S  ++   ++  V+  G+ TP  +  +V
Sbjct: 13  RCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAV 60

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74

 Score = 39.2 bits (92), Expect = 7e-05
 Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK 215
           + + + V+ + C  C   V   +  + GV   S+ L   +  ++ D            ++
Sbjct: 2   RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE 61

Query: 216 KAQF 219
            A F
Sbjct: 62  DAGF 65

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84

 Score = 39.3 bits (92), Expect = 8e-05
 Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 4/66 (6%)

Query: 150 STNKSRDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPS 205
           S  ++ + V+ ++V  + C  C   +   I K++GV    + L  ++ TI+     ++  
Sbjct: 2   SMAQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVE 61

Query: 206 GVLASV 211
            +   +
Sbjct: 62  EMKKQI 67

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68

 Score = 38.8 bits (91), Expect = 9e-05
 Identities = 7/52 (13%), Positives = 19/52 (36%)

Query: 166 HCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
            C  C  ++ + + ++ GV    + L  +K  +  D           ++ + 
Sbjct: 10  SCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINEL 61

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 9e-05
 Identities = 39/214 (18%), Positives = 71/214 (33%), Gaps = 57/214 (26%)

Query: 36  HHHHRH-----NRKPYAPCSSQLPIIPKPYSISNHD--HHQKSSRKI-SAKQTDHLRRKS 87
           HHHH H         Y      L +    + + N D    Q   + I S ++ DH+    
Sbjct: 1   HHHHHHMDFETGEHQYQ-YKDILSVFEDAF-VDNFDCKDVQDMPKSILSKEEIDHI---- 54

Query: 88  SADITDLNGDSSYGSSRYL---LSDKP------FTDWKSESDHH--ATALVRSQSAKPKL 136
                 +    +   +  L   L  K       F +     ++    + + +++  +P +
Sbjct: 55  ------IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI-KTEQRQPSM 107

Query: 137 VTSSNDSPSLKSSSTNKSRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKV 196
           +T        +  + N+   K  V R+  +      K+R+ + ++            K V
Sbjct: 108 MTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL-----KLRQALLELR---------PAKNV 153

Query: 197 TIIGDVTPSG--VLA-SVSSVKKAQ-------FW 220
            I G V  SG   +A  V    K Q       FW
Sbjct: 154 LIDG-VLGSGKTWVALDVCLSYKVQCKMDFKIFW 186

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75

 Score = 38.9 bits (91), Expect = 9e-05
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 156 DKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV 214
           D V+ L V  + C  C  K+   ++K  G+   S+ L T K  I  D    G    + ++
Sbjct: 3   DGVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTI 62

Query: 215 KKAQF 219
           +   F
Sbjct: 63  ESLGF 67

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTII--GDVTPSGVLASV 211
           + V+L V  + C  C   +   +  ++GVT   I L T +  +    +VT   +   +
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEII 59

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 166 HCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
            C  C  KV   + ++ GV    +   T+K+ +  D      +   S+++KA
Sbjct: 13  DCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQV--ESALQKA 62

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 9/59 (15%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASV 211
               ++V+ + C  C   + +++ + EG+ S  + L   K  +  +   + P  +   +
Sbjct: 3   SKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFI 61

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 11/59 (18%), Positives = 28/59 (47%), Gaps = 4/59 (6%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASV 211
           K   ++V  + C  C   + + + +++GV   S+ + T ++T+  D   V+   +   +
Sbjct: 3   KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERI 61

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 154 SRDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVS 212
           S  K + ++VS + C  C  ++ K + +M GVT  +++L T+ V +I D   +G  A   
Sbjct: 3   SEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQE 62

Query: 213 SVKKA 217
            ++K 
Sbjct: 63  KIEKL 67

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	243
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.35
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.26
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.24
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.21
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.21
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.2
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.02
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.01
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.01
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.0
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.0
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	98.99
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	98.96
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	98.96
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	98.96
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	98.96
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	98.96
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	98.95
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	98.95
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	98.94
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	98.94
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	98.94
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	98.93
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	98.92
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	98.88
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	98.87
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	98.86
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	98.86
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	98.83
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.83
2kyz_A	67	Heavy metal binding protein; structural genomics,	98.82
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.81
2kkh_A	95	Putative heavy metal transporter; zinc transport,	98.81
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	98.8
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.76
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	98.75
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.7
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.64
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.36
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.23
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.21

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.35  E-value=3.2e-12  Score=89.75  Aligned_cols=65  Identities=28%  Similarity=0.498  Sum_probs=60.3

Q ss_pred             eeEEEEEEeechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeecCC
Q 026144          157 KVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQFWPS  222 (243)
Q Consensus       157 ~~v~LkV~M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael~~~  222 (243)
                      .+++|.|.|+|.+|+.+|+++|.+++|| ++.+|+.+++++|.+.+++++|.++|++. |.+++|..
T Consensus         2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~   67 (68)
T 3iwl_A            2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL   67 (68)
T ss_dssp             CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred             ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence            4577888999999999999999999999 99999999999999999999999999985 99988864

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.26  E-value=2.1e-11  Score=85.80  Aligned_cols=67  Identities=16%  Similarity=0.362  Sum_probs=60.4

Q ss_pred             ceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeecCC
Q 026144          156 DKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFWPS  222 (243)
Q Consensus       156 ~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~~~  222 (243)
                      +++++|.|+ |+|.+|+.+|+++|.+++||..+.||+.+++++|.++   ++.++|..+|++. |.++++.+
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE   72 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence            357889999 9999999999999999999999999999999999875   6899999999985 88887643

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.24  E-value=4.2e-11  Score=84.41  Aligned_cols=66  Identities=24%  Similarity=0.400  Sum_probs=60.6

Q ss_pred             ceeEEEEEEeechhHHHHHHHHHhccC-CceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeecC
Q 026144          156 DKVVVLRVSIHCKGCEGKVRKHISKME-GVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQFWP  221 (243)
Q Consensus       156 ~~~v~LkV~M~C~~Ca~kIekaL~kl~-GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael~~  221 (243)
                      +.+++|.|+|+|.+|+.+|+++|.+++ ||.++.||+.+++++|.+.++.++|.++|++. |.+.+|.
T Consensus         4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   71 (73)
T 1cc8_A            4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK   71 (73)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence            456788999999999999999999999 99999999999999999988999999999985 8887764

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.21  E-value=4.6e-11  Score=84.73  Aligned_cols=66  Identities=21%  Similarity=0.363  Sum_probs=60.7

Q ss_pred             CceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeecCC
Q 026144          155 RDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQFWPS  222 (243)
Q Consensus       155 ~~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael~~~  222 (243)
                      .+++++|.|+ |+|.+|+.+|+++|.+ +||..+.||+.+++++|.++ ++++|.++|++. |.++++.+
T Consensus         3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~   70 (73)
T 3fry_A            3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS   70 (73)
T ss_dssp             CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred             ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence            4677899999 9999999999999999 99999999999999999999 999999999985 88887764

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.21  E-value=6.6e-11  Score=81.96  Aligned_cols=63  Identities=19%  Similarity=0.454  Sum_probs=57.6

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEe--cCCHHHHHHHHHhh-cCeee
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIG--DVTPSGVLASVSSV-KKAQF  219 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g--~v~~~eI~~aIeK~-~~Ael  219 (243)
                      ++++|.|+ |+|.+|+.+|+++|.+++||..+.||+.+++++|.+  .+++++|.++|++. |.+++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~   68 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV   68 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence            56889999 999999999999999999999999999999999995  47899999999985 87765

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.20  E-value=1.7e-10  Score=87.55  Aligned_cols=69  Identities=19%  Similarity=0.323  Sum_probs=63.1

Q ss_pred             ceeEEEEEEeechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeecCCCC
Q 026144          156 DKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQFWPSST  224 (243)
Q Consensus       156 ~~~v~LkV~M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael~~~~~  224 (243)
                      ..+++|.|+|+|.+|+.+|+++|.+++||..+.||+..++++|.+.++..+|.++|++. |.+.+|....
T Consensus        18 ~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~   87 (98)
T 2crl_A           18 LCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGS   87 (98)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCC
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCC
Confidence            45678888999999999999999999999999999999999999989999999999985 9998886654

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.02  E-value=5.9e-10  Score=74.32  Aligned_cols=60  Identities=27%  Similarity=0.477  Sum_probs=54.8

Q ss_pred             eEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCe
Q 026144          158 VVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKA  217 (243)
Q Consensus       158 ~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~A  217 (243)
                      ++.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.+.++.+.|.++|++. |.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~   63 (64)
T 2xmm_A            2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV   63 (64)
T ss_dssp             CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred             eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            3578999 99999999999999999999999999999999999888899999999884 654

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.01  E-value=1.2e-09  Score=78.70  Aligned_cols=70  Identities=17%  Similarity=0.400  Sum_probs=61.3

Q ss_pred             CCceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeecCCC
Q 026144          154 SRDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFWPSS  223 (243)
Q Consensus       154 ~~~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~~~~  223 (243)
                      .....+.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++   ++..+|...|++. |.+.++..+
T Consensus         6 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~   80 (84)
T 1q8l_A            6 AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQP   80 (84)
T ss_dssp             SSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCT
T ss_pred             cCceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCCc
Confidence            34567889999 9999999999999999999999999999999999875   5788999999985 887776654

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.01  E-value=2e-09  Score=73.51  Aligned_cols=63  Identities=22%  Similarity=0.428  Sum_probs=56.1

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeee
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQF  219 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael  219 (243)
                      +.+.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++   ++.++|...|++. |.+.+
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   70 (72)
T 1aw0_A            3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL   70 (72)
T ss_dssp             EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred             eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence            45789999 9999999999999999999999999999999999875   5788899999884 76654

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.00  E-value=2.3e-09  Score=72.82  Aligned_cols=63  Identities=19%  Similarity=0.441  Sum_probs=55.1

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec--CCHHHHHHHHHhh-cCeee
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD--VTPSGVLASVSSV-KKAQF  219 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~--v~~~eI~~aIeK~-~~Ael  219 (243)
                      +.+.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++  ++.+.|...|++. |.+.+
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~   69 (71)
T 2xmw_A            3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV   69 (71)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred             cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence            56789999 9999999999999999999999999999999999875  6778889999884 76543

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.00  E-value=2.4e-09  Score=73.10  Aligned_cols=62  Identities=19%  Similarity=0.403  Sum_probs=55.3

Q ss_pred             ceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCe
Q 026144          156 DKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKA  217 (243)
Q Consensus       156 ~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~A  217 (243)
                      +..+.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++   ++.++|...|++. |.+
T Consensus         4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   70 (71)
T 2l3m_A            4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV   70 (71)
T ss_dssp             EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            566889999 9999999999999999999999999999999999864   6788899999874 654

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=98.99  E-value=9e-10  Score=75.16  Aligned_cols=61  Identities=25%  Similarity=0.470  Sum_probs=54.7

Q ss_pred             EEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeee
Q 026144          159 VVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQF  219 (243)
Q Consensus       159 v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael  219 (243)
                      +.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.+.++.++|.++|++. |.+..
T Consensus         2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~   64 (66)
T 2roe_A            2 LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEV   64 (66)
T ss_dssp             BCEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEE
T ss_pred             EEEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEe
Confidence            358999 99999999999999999999999999999999996668889999999985 76543

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=98.96  E-value=2.7e-09  Score=72.87  Aligned_cols=63  Identities=24%  Similarity=0.440  Sum_probs=56.0

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeee
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQF  219 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael  219 (243)
                      ..+.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++   ++.++|...|++. |.+.+
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   70 (72)
T 1osd_A            3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV   70 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred             eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            45789999 9999999999999999999999999999999999865   5788899999884 76654

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=98.96  E-value=2.1e-09  Score=73.37  Aligned_cols=65  Identities=22%  Similarity=0.443  Sum_probs=57.9

Q ss_pred             eEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec--CCHHHHHHHHHhh-cCeeecCC
Q 026144          158 VVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD--VTPSGVLASVSSV-KKAQFWPS  222 (243)
Q Consensus       158 ~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~--v~~~eI~~aIeK~-~~Ael~~~  222 (243)
                      ++.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..+++.|.++  ++.+.|...|++. |.+.++.+
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~~   71 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILRD   71 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEEC
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEccC
Confidence            5689999 9999999999999999999999999999999999875  6778899999984 88877654

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=98.96  E-value=2.5e-09  Score=78.84  Aligned_cols=67  Identities=18%  Similarity=0.440  Sum_probs=58.8

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh----cCeeecCCC
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV----KKAQFWPSS  223 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~----~~Ael~~~~  223 (243)
                      ..+.|.|+ |+|.+|+.+|+++|.+++||..+.||+..++++|.++   ++.++|..+|++.    |.+.++.+.
T Consensus         3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~   77 (90)
T 2g9o_A            3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEV   77 (90)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCC
Confidence            45789999 9999999999999999999999999999999999864   5778899999874    777777654

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=98.96  E-value=4.2e-09  Score=73.00  Aligned_cols=64  Identities=27%  Similarity=0.483  Sum_probs=56.7

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeec
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFW  220 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~  220 (243)
                      ..+.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..+++.|.++   ++.++|...|++. |.+.+.
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   70 (75)
T 3cjk_B            2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH   70 (75)
T ss_dssp             EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEE
T ss_pred             cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEee
Confidence            35689999 9999999999999999999999999999999999875   5788899999985 877654

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=98.96  E-value=4e-09  Score=72.31  Aligned_cols=66  Identities=23%  Similarity=0.491  Sum_probs=57.7

Q ss_pred             CceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeec
Q 026144          155 RDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFW  220 (243)
Q Consensus       155 ~~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~  220 (243)
                      .+..+.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..+++.|.++   ++.+.|...|++. |.+.++
T Consensus         4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   74 (76)
T 1opz_A            4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE   74 (76)
T ss_dssp             CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred             cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence            3566789999 9999999999999999999999999999999999864   5788899999884 766554

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=98.95  E-value=6e-09  Score=72.19  Aligned_cols=64  Identities=19%  Similarity=0.335  Sum_probs=55.4

Q ss_pred             ceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecC-CHHHHHHHHHhh-cCeee
Q 026144          156 DKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDV-TPSGVLASVSSV-KKAQF  219 (243)
Q Consensus       156 ~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v-~~~eI~~aIeK~-~~Ael  219 (243)
                      +.++.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++. ..+.|...|++. |.+..
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~   68 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRD   68 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEE
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCcccc
Confidence            456789999 99999999999999999999999999999999998763 367788888874 76543

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=98.95  E-value=1.4e-09  Score=80.28  Aligned_cols=63  Identities=14%  Similarity=0.284  Sum_probs=56.5

Q ss_pred             CceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCe
Q 026144          155 RDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKA  217 (243)
Q Consensus       155 ~~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~A  217 (243)
                      .+..+.|.|+ |+|.+|+.+|+++|.+++||..+.||+..++++|.+.++.++|.++|++. |.+
T Consensus        20 ~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           20 QGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP   84 (85)
T ss_dssp             --CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred             cccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            4556789999 99999999999999999999999999999999999888999999999985 654

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=98.94  E-value=5.5e-09  Score=69.54  Aligned_cols=61  Identities=20%  Similarity=0.430  Sum_probs=53.8

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCe
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKA  217 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~A  217 (243)
                      ....|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++   ++.+.|...|++. |.+
T Consensus         2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   67 (69)
T 2qif_A            2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            45679999 9999999999999999999999999999999999865   5778888888874 643

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=98.94  E-value=2.7e-09  Score=72.62  Aligned_cols=61  Identities=21%  Similarity=0.449  Sum_probs=54.2

Q ss_pred             EEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec--CCHHHHHHHHHhh-cCeee
Q 026144          159 VVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD--VTPSGVLASVSSV-KKAQF  219 (243)
Q Consensus       159 v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~--v~~~eI~~aIeK~-~~Ael  219 (243)
                      +.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++  ....+|...|++. |.+.+
T Consensus         2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~   66 (69)
T 2kt2_A            2 THLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATL   66 (69)
T ss_dssp             CCEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEEC
T ss_pred             EEEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEe
Confidence            358999 9999999999999999999999999999999999865  5778899999985 76554

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=98.94  E-value=4.8e-09  Score=73.55  Aligned_cols=66  Identities=26%  Similarity=0.449  Sum_probs=58.2

Q ss_pred             CceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeec
Q 026144          155 RDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFW  220 (243)
Q Consensus       155 ~~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~  220 (243)
                      ....+.|.|. |+|.+|+.+|+++|.+++||..+.+|+..++++|.++   ++..+|.++|++. |.+.+.
T Consensus         6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   76 (79)
T 1kvi_A            6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH   76 (79)
T ss_dssp             TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEEC
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEec
Confidence            4567889999 9999999999999999999999999999999999875   5778899999985 876554

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=98.93  E-value=2.1e-09  Score=75.22  Aligned_cols=67  Identities=15%  Similarity=0.354  Sum_probs=59.2

Q ss_pred             ceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeecCC
Q 026144          156 DKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFWPS  222 (243)
Q Consensus       156 ~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~~~  222 (243)
                      ++++.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++   ++...|..+|++. |.+.++.+
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   73 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIEN   73 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEESC
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECCc
Confidence            466789999 9999999999999999999999999999999999875   5778899999885 88776644

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=98.92  E-value=4.1e-09  Score=70.93  Aligned_cols=61  Identities=16%  Similarity=0.443  Sum_probs=54.4

Q ss_pred             EEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeee
Q 026144          159 VVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQF  219 (243)
Q Consensus       159 v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael  219 (243)
                      +.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++   ++.++|...|++. |.+++
T Consensus         2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   67 (68)
T 1cpz_A            2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV   67 (68)
T ss_dssp             CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred             EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence            468999 9999999999999999999999999999999999875   5788899999884 77654

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=98.87  E-value=5.3e-09  Score=70.02  Aligned_cols=59  Identities=22%  Similarity=0.433  Sum_probs=52.6

Q ss_pred             eEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec--CCHHHHHHHHHhh-cC
Q 026144          158 VVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD--VTPSGVLASVSSV-KK  216 (243)
Q Consensus       158 ~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~--v~~~eI~~aIeK~-~~  216 (243)
                      ++.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++  .+.++|.+.|++. |.
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~   64 (66)
T 1yg0_A            2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQE   64 (66)
T ss_dssp             EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCC
T ss_pred             eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCC
Confidence            4578899 9999999999999999999999999999999999875  5778888989874 64

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=98.86  E-value=7.6e-09  Score=72.14  Aligned_cols=66  Identities=18%  Similarity=0.408  Sum_probs=58.0

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeecCC
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFWPS  222 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~~~  222 (243)
                      ..+.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..+++.|.++   ++...|...|++. |.+.++..
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~   73 (80)
T 1jww_A            3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE   73 (80)
T ss_dssp             EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCS
T ss_pred             eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCc
Confidence            45789999 9999999999999999999999999999999999864   5778899999884 87777643

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=98.86  E-value=9.8e-09  Score=70.53  Aligned_cols=63  Identities=25%  Similarity=0.480  Sum_probs=54.8

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeee
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQF  219 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael  219 (243)
                      ..+.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++   ++...|...|++. |.+.+
T Consensus         4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   71 (75)
T 1yjr_A            4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSL   71 (75)
T ss_dssp             CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcee
Confidence            35789999 9999999999999999999999999999999999875   4567888888874 76543

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=98.83  E-value=8e-09  Score=69.49  Aligned_cols=62  Identities=18%  Similarity=0.434  Sum_probs=54.3

Q ss_pred             ceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCe
Q 026144          156 DKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKA  217 (243)
Q Consensus       156 ~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~A  217 (243)
                      ...+.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..++++|.++   ++...|...|++. |.+
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   68 (71)
T 2ldi_A            2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTL   68 (71)
T ss_dssp             CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            355789999 9999999999999999999999999999999999865   5678888888874 654

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.83  E-value=8.6e-09  Score=80.38  Aligned_cols=85  Identities=18%  Similarity=0.342  Sum_probs=66.4

Q ss_pred             ceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeecCCCCCCCCCC
Q 026144          156 DKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFWPSSTSTSSSL  230 (243)
Q Consensus       156 ~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~~~~~~~~~~~  230 (243)
                      ++++.|.|+ |+|.+|+.+|+++|.+++||..+.+|+..+++.|.++   ++..+|...|++. |.+.+...........
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~   82 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGSDGNI   82 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSCSCCSSSEE
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeeccccccccee
Confidence            567899999 9999999999999999999999999999999999864   5678899999885 7766543211111223


Q ss_pred             CCCCcccccc
Q 026144          231 SSPLVDMTSY  240 (243)
Q Consensus       231 ~~~~~~m~~~  240 (243)
                      ...+.||.|.
T Consensus        83 ~~~v~gm~C~   92 (149)
T 2ew9_A           83 ELTITGMTCA   92 (149)
T ss_dssp             EEEEESCCSH
T ss_pred             EEEEEeccCH
Confidence            4556788874

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=98.82  E-value=7.5e-09  Score=70.88  Aligned_cols=59  Identities=24%  Similarity=0.495  Sum_probs=52.2

Q ss_pred             eEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCee
Q 026144          158 VVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQ  218 (243)
Q Consensus       158 ~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ae  218 (243)
                      +..|.|+ |+|.+|+.+|+++|.++ ||..+.+|+..++++|.++.. .+|..+|++. |.+.
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~   62 (67)
T 2kyz_A            2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVE   62 (67)
T ss_dssp             EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCC
T ss_pred             eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCcee
Confidence            3579999 99999999999999999 999999999999999998755 7888899884 7654

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.81  E-value=1.7e-08  Score=78.73  Aligned_cols=63  Identities=19%  Similarity=0.450  Sum_probs=56.8

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeee
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQF  219 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael  219 (243)
                      ..+.|.|+ |+|.+|+.+|+++|.+++||..+.||+.+++++|.++   ++..+|.++|++. |.+.+
T Consensus        80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  147 (149)
T 2ew9_A           80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASL  147 (149)
T ss_dssp             SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEEC
T ss_pred             ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEe
Confidence            45789999 9999999999999999999999999999999999875   5789999999985 77654

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=98.81  E-value=3.5e-08  Score=72.70  Aligned_cols=69  Identities=14%  Similarity=0.319  Sum_probs=60.4

Q ss_pred             CceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeecCCC
Q 026144          155 RDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFWPSS  223 (243)
Q Consensus       155 ~~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~~~~  223 (243)
                      .+..+.|.|. |+|.+|+.+|+++|.+++||..+.+|+..+++.|.++   ++...|...|+.. |.+.++...
T Consensus        14 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~   87 (95)
T 2kkh_A           14 KLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNG   87 (95)
T ss_dssp             CSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCC
T ss_pred             ceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCC
Confidence            4567889999 9999999999999999999999999999999999875   5788899999885 887776554

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.80  E-value=1.4e-08  Score=88.65  Aligned_cols=69  Identities=16%  Similarity=0.454  Sum_probs=62.1

Q ss_pred             eeEEEEEEeechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeecCCCCC
Q 026144          157 KVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQFWPSSTS  225 (243)
Q Consensus       157 ~~v~LkV~M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael~~~~~~  225 (243)
                      .+++|.|+|+|.+|+.+|+++|.+++||.++.||+.+++++|.+.+++++|.++|++. |.+.++....+
T Consensus         6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~   75 (222)
T 1qup_A            6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP   75 (222)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred             eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence            4567888899999999999999999999999999999999999889999999999985 88888766533

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.76  E-value=2.5e-08  Score=78.29  Aligned_cols=67  Identities=18%  Similarity=0.403  Sum_probs=60.0

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeecCCC
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFWPSS  223 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~~~~  223 (243)
                      ..+.|.|+ |+|.+|+.+|+++|.+++||..+.||+.+++++|.++   ++..+|.++|++. |.+.++.+.
T Consensus        74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~  145 (151)
T 1p6t_A           74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ  145 (151)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSS
T ss_pred             cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCcc
Confidence            56789999 9999999999999999999999999999999999865   6889999999985 888776543

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=98.75  E-value=2.5e-08  Score=68.76  Aligned_cols=57  Identities=25%  Similarity=0.547  Sum_probs=48.7

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHh-hcCe
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSS-VKKA  217 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK-~~~A  217 (243)
                      +++.|.|. |+|.+|+.+|+++|.+++||..+.+|+..++++|.++..    ...|++ +|.+
T Consensus         3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~   61 (71)
T 2aj0_A            3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFE   61 (71)
T ss_dssp             CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTT
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCc
Confidence            35789999 999999999999999999999999999999999998764    345565 3643

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.70  E-value=4.9e-08  Score=81.43  Aligned_cols=68  Identities=21%  Similarity=0.457  Sum_probs=58.7

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeecCCCC
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFWPSST  224 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~~~~~  224 (243)
                      ..+.|.|+ |+|.+|+.+|+++|.+++||..+.||+..++++|.++   ++..+|..+|++. |.+.++....
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~  194 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSESC  194 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC----
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCCCC
Confidence            56889999 9999999999999999999999999999999999874   5788999999985 8888876553

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.64  E-value=5.3e-08  Score=86.46  Aligned_cols=67  Identities=16%  Similarity=0.465  Sum_probs=60.7

Q ss_pred             eeEEEEEEeechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeecCCC
Q 026144          157 KVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQFWPSS  223 (243)
Q Consensus       157 ~~v~LkV~M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael~~~~  223 (243)
                      .+++|.|+|+|.+|+.+|+++|.+++||..+.||+.+++++|.+.+++++|.++|++. |.+.++...
T Consensus         7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~   74 (249)
T 1jk9_B            7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAG   74 (249)
T ss_dssp             EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEES
T ss_pred             eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCC
Confidence            4567888899999999999999999999999999999999999889999999999985 888876554

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.36  E-value=8.2e-07  Score=73.95  Aligned_cols=60  Identities=23%  Similarity=0.512  Sum_probs=53.1

Q ss_pred             CceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh
Q 026144          155 RDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV  214 (243)
Q Consensus       155 ~~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~  214 (243)
                      .+..+.|.|+ |+|.+|+.+|+++|.+++||..+.|++..++++|.++   ++...|..+|++.
T Consensus        18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~   81 (202)
T 2rop_A           18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEAL   81 (202)
T ss_dssp             --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred             ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHh
Confidence            3566789999 9999999999999999999999999999999999875   5778899999874

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.23  E-value=4.1e-06  Score=65.41  Aligned_cols=62  Identities=24%  Similarity=0.546  Sum_probs=53.6

Q ss_pred             ceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCe
Q 026144          156 DKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKA  217 (243)
Q Consensus       156 ~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~A  217 (243)
                      .....|.|+ |+|.+|+.+|+++|.+++||..+.+++..+++.|.++   ++...|...|++. |.+
T Consensus         5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   71 (151)
T 1p6t_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (151)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence            456789999 9999999999999999999999999999999999764   5678888888874 643

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.21  E-value=3.6e-06  Score=84.06  Aligned_cols=62  Identities=18%  Similarity=0.301  Sum_probs=56.2

Q ss_pred             eEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeee
Q 026144          158 VVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQF  219 (243)
Q Consensus       158 ~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael  219 (243)
                      +++|.|+ |+|.+|+.+||++|.+++||.++.||+.+++++|+++   ++.++|.++|++. |.+..
T Consensus         3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~   69 (723)
T 3j09_A            3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVD   69 (723)
T ss_dssp             CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESS
T ss_pred             eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccc
Confidence            5789999 9999999999999999999999999999999999875   6889999999985 76543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	243
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	3e-12
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	1e-11
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	4e-11
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	2e-10
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	5e-10
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	6e-10
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	1e-09
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	5e-09
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	5e-09
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	1e-08
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	1e-08
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	1e-08
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	6e-08
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	1e-07

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.3 bits (141), Expect = 3e-12
 Identities = 12/67 (17%), Positives = 34/67 (50%), Gaps = 2/67 (2%)

Query: 150 STNKSRDKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLA 209
           +TN + +      + +HC+ C   ++  +  + G+ S + D+  + +++   V PS ++ 
Sbjct: 1   TTNDTYE--ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIIN 58

Query: 210 SVSSVKK 216
           ++ +  K
Sbjct: 59  TLRNCGK 65

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.7 bits (137), Expect = 1e-11
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 157 KVVVLRVSIHCKGCEGKVRKHISKME-GVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK 215
           K     V + C GC G V K ++K+E  V+   I L  + V +   +    +L  +    
Sbjct: 4   KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTG 63

Query: 216 K 216
           K
Sbjct: 64  K 64

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 54.8 bits (132), Expect = 4e-11
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 161 LRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQF 219
             V + C GC   V + ++K+ G   + IDL  KKV I  + +   +LA++    K   +
Sbjct: 5   FSVDMTCGGCAEAVSRVLNKLGG-VKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSY 63

Query: 220 W 220
            
Sbjct: 64  L 64

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 53.2 bits (128), Expect = 2e-10
 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 154 SRDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVS 212
           S  K + ++VS + C  C  ++ K + +M GVT  +++L T+ V +I D   +G  A   
Sbjct: 3   SEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQE 62

Query: 213 SVKKAQF 219
            ++K  +
Sbjct: 63  KIEKLGY 69

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 51.9 bits (124), Expect = 5e-10
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 159 VVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSS 213
           + L V  I C+ C   V K +   +   +  +DLT+KKVTI   +    +  +++S
Sbjct: 3   IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIAS 58

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 52.0 bits (125), Expect = 6e-10
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK 215
           + V L V  + C  C   V+K ISK+EGV+   +   T++  +  D   + V     +  
Sbjct: 3   QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62

Query: 216 KAQF 219
            A +
Sbjct: 63  DAGY 66

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.3 bits (123), Expect = 1e-09
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTII--GDVTPSGVLASVSS 213
           + V+L V  + C  C   +   +  ++GVT   I L T +  +    +VT   +   +  
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 5e-09
 Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 1/82 (1%)

Query: 150 STNKSRDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVL 208
           S  ++ + V+ ++V  + C  C   +   I K++GV    + L  ++ TI+       V 
Sbjct: 2   SMAQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVE 61

Query: 209 ASVSSVKKAQFWPSSTSTSSSL 230
                ++   F          L
Sbjct: 62  EMKKQIEAMGFPAFVKKQPKYL 83

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (118), Expect = 5e-09
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK 215
           +  V+ +  + C  C   +   ISK  GV S  + L     T+  D   +       +++
Sbjct: 3   QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

Query: 216 KAQF 219
              F
Sbjct: 63  DMGF 66

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 48.2 bits (115), Expect = 1e-08
 Identities = 12/62 (19%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 159 VVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
             L+V  + C+ C   V   + +++GV++  ++L   KV +  D     V     +++  
Sbjct: 4   KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQ 63

Query: 218 QF 219
            +
Sbjct: 64  GY 65

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (116), Expect = 1e-08
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVK 215
             V + V  + C  C   + + I K+ GV    + L  K  TII D           ++ 
Sbjct: 8   NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 67

Query: 216 KAQF 219
              F
Sbjct: 68  DMGF 71

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 48.2 bits (115), Expect = 1e-08
 Identities = 8/60 (13%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 161 LRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKAQF 219
             V  + C  C  ++ + + ++ GV    + L  +K  +  D           ++ +  +
Sbjct: 4   FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGY 63

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 46.3 bits (110), Expect = 6e-08
 Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 159 VVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
              +VS + C  C  KV   + ++ GV    +   T+K+ +  D      +   S+++KA
Sbjct: 5   YSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQV--ESALQKA 62

Query: 218 QF 219
            +
Sbjct: 63  GY 64

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 46.0 bits (109), Expect = 1e-07
 Identities = 12/62 (19%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 159 VVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSVKKA 217
               +  + C  C  ++ K ++K+EGV +  ++   + VT+  +   + V     +V K 
Sbjct: 4   AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKL 63

Query: 218 QF 219
            +
Sbjct: 64  GY 65

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	243
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.52
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.52
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.46
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.39
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.36
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.35
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.35
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.33
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.33
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.31
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.31
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.27
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.25
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.2

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=1.5e-14  Score=104.23  Aligned_cols=66  Identities=17%  Similarity=0.465  Sum_probs=62.0

Q ss_pred             ceeEEEEEEeechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeecC
Q 026144          156 DKVVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQFWP  221 (243)
Q Consensus       156 ~~~v~LkV~M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael~~  221 (243)
                      ..+++|.|+|+|.+|+.+|+++|.+++||.+|.||+.+++++|++++++++|+++|++. |.|.+++
T Consensus         5 ~~~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~g   71 (72)
T d1qupa2           5 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRG   71 (72)
T ss_dssp             CEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEEC
T ss_pred             cEEEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEec
Confidence            45678999999999999999999999999999999999999999999999999999995 9998875

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.52  E-value=1.6e-14  Score=102.69  Aligned_cols=63  Identities=29%  Similarity=0.528  Sum_probs=59.3

Q ss_pred             eEEEEEEeechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeecC
Q 026144          158 VVVLRVSIHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQFWP  221 (243)
Q Consensus       158 ~v~LkV~M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ael~~  221 (243)
                      +++|+|+|+|.+|+.+|+++|++++|| +|.||+.+++++|++++++++|+++|++. |.|++++
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~lig   65 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   65 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEee
Confidence            478999999999999999999999998 59999999999999999999999999995 9999874

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.46  E-value=1.3e-13  Score=99.43  Aligned_cols=64  Identities=25%  Similarity=0.453  Sum_probs=59.4

Q ss_pred             CceeEEEEEEeechhHHHHHHHHHhccC-CceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCee
Q 026144          155 RDKVVVLRVSIHCKGCEGKVRKHISKME-GVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQ  218 (243)
Q Consensus       155 ~~~~v~LkV~M~C~~Ca~kIekaL~kl~-GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ae  218 (243)
                      ..++++|+|+|+|.+|+++|+++|.+++ ||.+|.||+.+++|+|.+++++++|+++|++. |.+.
T Consensus         2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~   67 (72)
T d1cc8a_           2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVR   67 (72)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEE
T ss_pred             CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccC
Confidence            4678999999999999999999999995 99999999999999999999999999999995 7654

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.39  E-value=2.7e-13  Score=97.07  Aligned_cols=66  Identities=21%  Similarity=0.450  Sum_probs=60.9

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec--CCHHHHHHHHHhh-cCeeecCC
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD--VTPSGVLASVSSV-KKAQFWPS  222 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~--v~~~eI~~aIeK~-~~Ael~~~  222 (243)
                      +++.|.|+ |+|.+|+.+|+++|.+++||.++.||+.+++++|.++  ++.++|.++|++. |.++++.+
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~~~   71 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILRD   71 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEEEC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEccc
Confidence            57899999 9999999999999999999999999999999999865  8899999999995 99988754

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.6e-12  Score=92.69  Aligned_cols=65  Identities=22%  Similarity=0.398  Sum_probs=59.5

Q ss_pred             ceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeec
Q 026144          156 DKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFW  220 (243)
Q Consensus       156 ~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~  220 (243)
                      .++.+|+|+ |+|.+|+.+|+++|.+++||.++.||+.+++++|.++   ++.++|.++|++. |.|.+.
T Consensus         2 t~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l~   71 (72)
T d2aw0a_           2 TQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred             cEEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEeC
Confidence            467889999 9999999999999999999999999999999999874   7899999999995 888764

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.35  E-value=1e-12  Score=93.97  Aligned_cols=65  Identities=23%  Similarity=0.408  Sum_probs=60.0

Q ss_pred             ceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeec
Q 026144          156 DKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFW  220 (243)
Q Consensus       156 ~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~  220 (243)
                      .+++.|.|+ |+|.+|+.+|+++|.+++||.++.||+.++++.|+++   ++.++|.++|++. |.|+++
T Consensus         2 tqt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v~   71 (72)
T d1osda_           2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEeC
Confidence            367899999 9999999999999999999999999999999999864   7899999999985 998876

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.35  E-value=1.1e-12  Score=92.81  Aligned_cols=61  Identities=16%  Similarity=0.441  Sum_probs=56.7

Q ss_pred             EEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeec
Q 026144          160 VLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFW  220 (243)
Q Consensus       160 ~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~  220 (243)
                      +|.|+ |+|.+|+.+|+++|.+++||.+++||+.+++++|+++   +++++|.++|++. |.++++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence            68999 9999999999999999999999999999999999964   7899999999995 988764

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.33  E-value=4.9e-13  Score=93.76  Aligned_cols=61  Identities=26%  Similarity=0.493  Sum_probs=57.3

Q ss_pred             eEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEecCCHHHHHHHHHhh-cCee
Q 026144          158 VVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGDVTPSGVLASVSSV-KKAQ  218 (243)
Q Consensus       158 ~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~v~~~eI~~aIeK~-~~Ae  218 (243)
                      +++|.|+ |+|.+|+.+|+++|++++||.+|.+|+.+++++|++++++++|.++|++. |.++
T Consensus         2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE   64 (64)
T ss_dssp             EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCCC
T ss_pred             eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCCC
Confidence            4789999 99999999999999999999999999999999999999999999999985 8764

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.9e-12  Score=95.44  Aligned_cols=71  Identities=17%  Similarity=0.401  Sum_probs=64.2

Q ss_pred             CCCceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeecCCC
Q 026144          153 KSRDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFWPSS  223 (243)
Q Consensus       153 ~~~~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~~~~  223 (243)
                      ......+.|+|+ |+|.+|+.+|+++|.+++||.++.||+.+++++|.++   ++.+.|.++|++. |.|.+..++
T Consensus         5 ~~~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~~~   80 (84)
T d1q8la_           5 QAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQP   80 (84)
T ss_dssp             SSSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCT
T ss_pred             CCCCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcCCc
Confidence            346778999999 9999999999999999999999999999999999975   7889999999985 998887655

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=5.7e-12  Score=91.52  Aligned_cols=68  Identities=25%  Similarity=0.424  Sum_probs=62.2

Q ss_pred             CCceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeecC
Q 026144          154 SRDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFWP  221 (243)
Q Consensus       154 ~~~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~~  221 (243)
                      ..+.++.|.|+ |+|.+|+.+|+++|++++||.+++||+.+++++|+++   ++..+|.++|++. |.+.+..
T Consensus         5 ~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~   77 (79)
T d1kvja_           5 MGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   77 (79)
T ss_dssp             TTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred             CCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeCC
Confidence            45788999999 9999999999999999999999999999999999975   7999999999985 8887653

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.31  E-value=4.2e-12  Score=89.92  Aligned_cols=62  Identities=19%  Similarity=0.407  Sum_probs=56.8

Q ss_pred             ceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCe
Q 026144          156 DKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKA  217 (243)
Q Consensus       156 ~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~A  217 (243)
                      +++.+|+|+ |+|.+|+.+|+++|++++||.++.||+.+++++|+++   ++.++|.+.|++. |.+
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~   67 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            467889999 9999999999999999999999999999999999975   7899999999984 754

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.27  E-value=6.3e-12  Score=91.31  Aligned_cols=68  Identities=18%  Similarity=0.397  Sum_probs=62.0

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeecCCCC
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKAQFWPSST  224 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~Ael~~~~~  224 (243)
                      +++.|.|+ |+|.+|+.+|+++|.+++||.++.||+.+++++|+++   ++..+|.++|++. |.+.++....
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~   74 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQD   74 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSSS
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECCccc
Confidence            46889999 9999999999999999999999999999999999974   7899999999985 9998876653

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.25  E-value=1e-11  Score=88.50  Aligned_cols=63  Identities=24%  Similarity=0.540  Sum_probs=57.4

Q ss_pred             CceeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec---CCHHHHHHHHHhh-cCe
Q 026144          155 RDKVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD---VTPSGVLASVSSV-KKA  217 (243)
Q Consensus       155 ~~~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~---v~~~eI~~aIeK~-~~A  217 (243)
                      ...+++|+|+ |+|.+|+.+|+++|.+++||.+|.||+.+++++|.++   ++.++|.++|++. |.+
T Consensus         4 ~~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             CceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            4568999999 9999999999999999999999999999999999864   7899999999985 753

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.20  E-value=2.3e-11  Score=87.02  Aligned_cols=63  Identities=19%  Similarity=0.336  Sum_probs=56.5

Q ss_pred             eeEEEEEE-eechhHHHHHHHHHhccCCceeEEEecCCCEEEEEec-CCHHHHHHHHHhh-cCeee
Q 026144          157 KVVVLRVS-IHCKGCEGKVRKHISKMEGVTSFSIDLTTKKVTIIGD-VTPSGVLASVSSV-KKAQF  219 (243)
Q Consensus       157 ~~v~LkV~-M~C~~Ca~kIekaL~kl~GV~sV~VD~~t~kVtV~g~-v~~~eI~~aIeK~-~~Ael  219 (243)
                      ++++|.|+ |+|.+|+.+|+++|.+++||.++.||+.+++++|.++ ...++|.++|++. |.++.
T Consensus         3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~~   68 (73)
T d1mwza_           3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRD   68 (73)
T ss_dssp             CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCCB
T ss_pred             CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCcccC
Confidence            46889999 9999999999999999999999999999999999986 4578999999985 86543