Citrus Sinensis ID: 026176

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240--
Protein Sequence
MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTLHYQTMMQKAHGLILLMNSLNT
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccHHHHHHcccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccHHHHHHHHHccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHEEEEEEEEHcHHHccHccHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccHcHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mhklsrsnrdKLQQFVSITGASEKAALQALKASdwhlegafdvfysqpqsksltdtRHLEELYNrykdpyldmILVDGITLLcndlqvdpqdIVMLVVSWHMKAATMCEFSKQEFigglqslgidsLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTLHYQTMMQKAHGLILLMNSLNT
Flexible Loop (DISEMBL)
mhklsrsnrdklQQFVSITGASEKAALQALKASDWHLEGAFDVfysqpqsksltdtrHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRaelkdeqkfREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTLHYQTMMQKAHGLILLMNSLNT
Low Complexity Region (SEG)
MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTLHYQTMMQKAHGLILLMNSLNT
Disordered region (IsUnstruct)
************************AALQALKASDWHLEGAFDVFYSQ*****LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTLHYQTMMQKAHGLILLM*****
Disordered Region (DISOPRED)
****************SITGASEKAALQALKASDWHLEGAF*****************LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTLHYQTMMQKAHGLILLMNSLN*
Disordered Region (DISEMBL)
**********KLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTLHYQTMMQKAHGLILLMNSLNT
Disordered Region (DISPRO)
*****R*NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTLHYQTMMQKAHGLILLMNSLNT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTLHYQTMMQKAHGLILLMNSLNT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	242	2.2.26 [Sep-21-2011]
Q8BZJ7	259	DCN1-like protein 2 OS=Mu	yes	no	0.888	0.830	0.412	2e-47
Q6PH85	259	DCN1-like protein 2 OS=Ho	yes	no	0.888	0.830	0.412	5e-47
Q96GG9	259	DCN1-like protein 1 OS=Ho	no	no	0.880	0.822	0.425	6e-47
Q5ZKU1	259	DCN1-like protein 1 OS=Ga	yes	no	0.880	0.822	0.420	2e-46
Q9QZ73	259	DCN1-like protein 1 OS=Mu	no	no	0.888	0.830	0.417	4e-46
Q9VUQ8	288	DCN1-like protein OS=Dros	yes	no	0.880	0.739	0.391	4e-42
Q5E9V1	304	DCN1-like protein 3 OS=Bo	no	no	0.702	0.559	0.394	5e-33
Q8K0V2	304	DCN1-like protein 3 OS=Mu	no	no	0.661	0.526	0.408	5e-33
Q4V8B2	304	DCN1-like protein 3 OS=Ra	no	no	0.661	0.526	0.408	5e-33
Q5R9G1	304	DCN1-like protein 3 OS=Po	no	no	0.661	0.526	0.408	5e-33

>sp|Q8BZJ7|DCNL2_MOUSE DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3

 Score =  189 bits (479), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/223 (41%), Positives = 142/223 (63%), Gaps = 8/223 (3%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
           MHKL  + +DK++QF++ T ASE+ A+  L  ++W L+ A D F+  P++      KS  
Sbjct: 1   MHKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSV 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE+LY+RYKDP   + I +DGI   C+DL +DP  I +LV++W  +AAT CEFSK+
Sbjct: 61  DQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKK 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
           EF+ G+  LG DS ++ +  +  +  ELKD  KF+++Y F F +AK  GQK L L+ A+ 
Sbjct: 121 EFVDGMTELGCDSTERLKALLPRLEQELKDPAKFKDLYQFTFTFAKNPGQKGLDLEMAVA 180

Query: 174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
            W+L+ + + +  +D W  FL   H ++I RDTW+ LL+F  +
Sbjct: 181 YWKLVLSGR-FKFLDLWNTFLLEHHKRSIPRDTWNLLLDFGNM 222

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
Mus musculus (taxid: 10090)

>sp|Q6PH85|DCNL2_HUMAN DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=1 SV=1

 Score =  187 bits (476), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 92/223 (41%), Positives = 138/223 (61%), Gaps = 8/223 (3%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
           MHKL  S +DK++QF++ T A E+ A+  L  ++W L+ A D F+  P S      ++  
Sbjct: 1   MHKLKSSQKDKVRQFMACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAV 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE LY RYKDP   + I VDGI   C+DL +DP  I +LV++W  +AAT CEFS++
Sbjct: 61  DKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRK 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
           EF+ G+  LG DS++K +  +  +  ELKD  KF++ Y F F +AK  GQK L L+ A+ 
Sbjct: 121 EFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAKNPGQKGLDLEMAVA 180

Query: 174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
            W+L+ + + +  +D W  FL   H ++I RDTW+ LL+F  +
Sbjct: 181 YWKLVLSGR-FKFLDLWNTFLMEHHKRSIPRDTWNLLLDFGNM 222

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Homo sapiens (taxid: 9606)

>sp|Q96GG9|DCNL1_HUMAN DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1

 Score =  187 bits (475), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 94/221 (42%), Positives = 139/221 (62%), Gaps = 8/221 (3%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
           M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct: 1   MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE+LYNRYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQ
Sbjct: 61  DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
           EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI 
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA 180

Query: 174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFA 214
            W L+    ++  +D W +FL   H ++I +DTW+ LL+F+
Sbjct: 181 YWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFS 220

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation. Functions to recruit the NEDD8-charged E2 enzyme to the cullin component. Involved in the release of inhibitory effets of CAND1 on cullin-RING ligase E3 complex assembly and activity. Acts also as an oncogene facilitating malignant transformation and carcinogenic progression.

Homo sapiens (taxid: 9606)

>sp|Q5ZKU1|DCNL1_CHICK DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1

 Score =  185 bits (470), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 93/221 (42%), Positives = 138/221 (62%), Gaps = 8/221 (3%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
           M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct: 1   MNKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE+LYNRYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSK 
Sbjct: 61  DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKL 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
           EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI 
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA 180

Query: 174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFA 214
            W L+    ++  +D W +FL   H ++I +DTW+ LL+F+
Sbjct: 181 YWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFS 220

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation.

Gallus gallus (taxid: 9031)

>sp|Q9QZ73|DCNL1_MOUSE DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1

 Score =  184 bits (468), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 93/223 (41%), Positives = 139/223 (62%), Gaps = 8/223 (3%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ------SKSLT 54
           M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct: 1   MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query: 55  DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
           D + LE+LY RYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQ
Sbjct: 61  DRKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
           EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI 
Sbjct: 121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA 180

Query: 174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
            W L+    ++  +D W +FL   H ++I +DTW+ LL+F+ +
Sbjct: 181 YWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFSSM 222

Part of an E3 ubiquitin ligase complex for neddylation. Required for neddylation of cullin components of E3 cullin-RING ubiquitin ligase complexes by enhancing the rate of cullins neddylation. Functions to recruit the NEDD8-charged E2 enzyme to the cullin component. Involved in the release of inhibitory effets of CAND1 on cullin-RING ligase E3 complex assembly and activity. Acts also as an oncogene facilitating malignant transformation and carcinogenic in vivo.

Mus musculus (taxid: 10090)

>sp|Q9VUQ8|DCN1L_DROME DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2

 Score =  171 bits (434), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 137/217 (63%), Gaps = 4/217 (1%)

Query: 1   MHKL-SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLT-DTRH 58
           M+KL S ++RDK+++F+S+T   E+ A+  L+ +DW  E A D ++  P+      D + 
Sbjct: 1   MNKLKSSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRELDRKR 60

Query: 59  LEELYNRYKDPYLDM-ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIG 117
           +E+L+ RY+DP   + I   G+     DL + P   ++L+++W   A   CEFS+ EFI 
Sbjct: 61  IEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFIN 120

Query: 118 GLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQL 177
           G+  LGIDS+DK + ++  +  EL D  KF++ Y+F F +AK+ GQK + L+ AI  W +
Sbjct: 121 GMCDLGIDSIDKLKTKLPILEQELNDAGKFKDFYHFTFNYAKDPGQKGIDLEMAIAYWCI 180

Query: 178 LFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFA 214
           + + + +  +D WCQFL+ KH +AISRDTW+ LL+FA
Sbjct: 181 VLSGR-FKFLDIWCQFLEEKHKRAISRDTWNLLLDFA 216

May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Drosophila melanogaster (taxid: 7227)

>sp|Q5E9V1|DCNL3_BOVIN DCN1-like protein 3 OS=Bos taurus GN=DCUN1D3 PE=2 SV=1

 Score =  141 bits (355), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 108/175 (61%), Gaps = 5/175 (2%)

Query: 47  QPQSKSLTDT-RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA 105
           +P+S +   + + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AA
Sbjct: 78  EPKSNAEESSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAA 137

Query: 106 TMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQ 163
           TMC+F+++EF  G +++  DS+D    R   +  E K E KF+++Y F F +    E+GQ
Sbjct: 138 TMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQ 197

Query: 164 KSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWSQLLEFARV 216
           +SL  + AI +W+L+F +   P++D W  FL    +  K ISRDTW+  L F +V
Sbjct: 198 RSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQV 252

Bos taurus (taxid: 9913)

>sp|Q8K0V2|DCNL3_MOUSE DCN1-like protein 3 OS=Mus musculus GN=Dcun1d3 PE=2 SV=1

 Score =  141 bits (355), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 102/164 (62%), Gaps = 4/164 (2%)

Query: 57  RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
           + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF 
Sbjct: 89  QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148

Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTAIGM 174
            G +++  DS+D    R   +  E K E KF+++Y F F +    E+GQ+SL  + AI +
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIAL 208

Query: 175 WQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWSQLLEFARV 216
           W+L+F +   P++D W  FL    +  K ISRDTW+  L F +V
Sbjct: 209 WKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQV 252

Mus musculus (taxid: 10090)

>sp|Q4V8B2|DCNL3_RAT DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d3 PE=2 SV=1

 Score =  141 bits (355), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 102/164 (62%), Gaps = 4/164 (2%)

Query: 57  RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
           + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF 
Sbjct: 89  QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148

Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTAIGM 174
            G +++  DS+D    R   +  E K E KF+++Y F F +    E+GQ+SL  + AI +
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIAL 208

Query: 175 WQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWSQLLEFARV 216
           W+L+F +   P++D W  FL    +  K ISRDTW+  L F +V
Sbjct: 209 WKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQV 252

Rattus norvegicus (taxid: 10116)

>sp|Q5R9G1|DCNL3_PONAB DCN1-like protein 3 OS=Pongo abelii GN=DCUN1D3 PE=2 SV=1

 Score =  141 bits (355), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 102/164 (62%), Gaps = 4/164 (2%)

Query: 57  RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
           + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF 
Sbjct: 89  QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 148

Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTAIGM 174
            G +++  DS+D    R   +  E K E KF+++Y F F +    E+GQ+SL  + AI +
Sbjct: 149 DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIAL 208

Query: 175 WQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWSQLLEFARV 216
           W+L+F +   P++D W  FL    +  K ISRDTW+  L F +V
Sbjct: 209 WKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQV 252

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	242
255555594	261	Defective in cullin neddylation protein,	0.892	0.827	0.912	1e-115
224098848	259	predicted protein [Populus trichocarpa]	0.913	0.853	0.873	1e-114
297736127	309	unnamed protein product [Vitis vinifera]	0.892	0.699	0.870	1e-110
356525740	259	PREDICTED: DCN1-like protein 2-like [Gly	0.892	0.833	0.870	1e-110
359494685	259	PREDICTED: DCN1-like protein 2-like [Vit	0.892	0.833	0.870	1e-110
356557032	259	PREDICTED: uncharacterized protein LOC10	0.892	0.833	0.865	1e-110
343171976	249	hypothetical protein, partial [Silene la	0.888	0.863	0.869	1e-109
449519908	259	PREDICTED: DCN1-like protein 2-like [Cuc	0.913	0.853	0.850	1e-109
388500426	259	unknown [Lotus japonicus]	0.892	0.833	0.856	1e-108
343171974	249	hypothetical protein, partial [Silene la	0.888	0.863	0.869	1e-108

>gi|255555594|ref|XP_002518833.1| Defective in cullin neddylation protein, putative [Ricinus communis] gi|223542006|gb|EEF43551.1| Defective in cullin neddylation protein, putative [Ricinus communis]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/216 (91%), Positives = 208/216 (96%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL+R NRDK+QQF++ITGASEKAALQALKASDWHLEGAFDVFYS PQ K+ TD+RHLE
Sbjct: 1   MHKLTRGNRDKVQQFMTITGASEKAALQALKASDWHLEGAFDVFYSHPQIKTFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKDPY+DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ
Sbjct: 61  ELYNRYKDPYVDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFA 180
           +LGIDSL+KFRERI FMR+ELKDEQKFREIYNFAF WAKEKGQKSLALDTAIGMWQLLFA
Sbjct: 121 ALGIDSLEKFRERIPFMRSELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFA 180

Query: 181 EKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
           EKQWPLVDHWCQFLQA+HNKAISRDTWSQLLEF R 
Sbjct: 181 EKQWPLVDHWCQFLQARHNKAISRDTWSQLLEFTRT 216

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098848|ref|XP_002311289.1| predicted protein [Populus trichocarpa] gi|222851109|gb|EEE88656.1| predicted protein [Populus trichocarpa]

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 193/221 (87%), Positives = 209/221 (94%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL+R NR+K+QQF+SITG SEK A+QALKASDWHLEGAFD FYSQPQS++ TD+RHLE
Sbjct: 1   MHKLNRGNREKVQQFMSITGTSEKVAVQALKASDWHLEGAFDAFYSQPQSRTYTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKDPY+DM+LVDGIT+LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ
Sbjct: 61  ELYNRYKDPYVDMVLVDGITILCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFA 180
           SLG+DSLDKFRE+I +MR+EL DEQKFREIYNFAF WAKEKGQKSLALDTAIGMWQLLFA
Sbjct: 121 SLGVDSLDKFREKIPYMRSELMDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFA 180

Query: 181 EKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTL 221
           EKQWPLVDHWCQFLQA+HNKAISRDTWSQLLEFAR    TL
Sbjct: 181 EKQWPLVDHWCQFLQAQHNKAISRDTWSQLLEFARTVDPTL 221

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736127|emb|CBI24165.3| unnamed protein product [Vitis vinifera]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/216 (87%), Positives = 203/216 (93%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDK+QQF++ITGASEK AL ALKASDWHLEGAFDVFYSQPQ K+ TD+RHLE
Sbjct: 43  MHKLGRGHRDKVQQFMAITGASEKVALHALKASDWHLEGAFDVFYSQPQIKAFTDSRHLE 102

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELY+RYKDPY+DMI+ DGI++LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI GLQ
Sbjct: 103 ELYSRYKDPYVDMIMADGISVLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFISGLQ 162

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFA 180
           +LGIDSL+KFRERI FMR ELKDEQKFREIYNFAF WAKEKGQKSLALDTAIGMWQLLFA
Sbjct: 163 ALGIDSLEKFRERIQFMRTELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFA 222

Query: 181 EKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
           EKQW LVDHWCQFLQA+HNKAISRDTWSQLLEFA+ 
Sbjct: 223 EKQWALVDHWCQFLQARHNKAISRDTWSQLLEFAKT 258

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525740|ref|XP_003531481.1| PREDICTED: DCN1-like protein 2-like [Glycine max]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/216 (87%), Positives = 203/216 (93%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDKLQQF++ITGASEK ALQALKASDWHLEGAFD FYSQPQ K+ TD+RHLE
Sbjct: 1   MHKLGRGHRDKLQQFITITGASEKLALQALKASDWHLEGAFDFFYSQPQLKTFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKD Y+DMIL DGITLLCND+QVDPQDIVMLV+SWHMKA TMCEFSK+EFI GLQ
Sbjct: 61  ELYNRYKDAYVDMILADGITLLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFA 180
           SLGIDSL+KFRE+I +MR+ELKDEQKFREIYNFAF WAKEKGQKSLALDTAIGMWQLLFA
Sbjct: 121 SLGIDSLEKFREKIPYMRSELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFA 180

Query: 181 EKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
           EKQWPLVDHWCQFLQA+HNKAISRDTWSQLLEFA+ 
Sbjct: 181 EKQWPLVDHWCQFLQARHNKAISRDTWSQLLEFAKT 216

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494685|ref|XP_002263696.2| PREDICTED: DCN1-like protein 2-like [Vitis vinifera]

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/216 (87%), Positives = 203/216 (93%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDK+QQF++ITGASEK AL ALKASDWHLEGAFDVFYSQPQ K+ TD+RHLE
Sbjct: 1   MHKLGRGHRDKVQQFMAITGASEKVALHALKASDWHLEGAFDVFYSQPQIKAFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELY+RYKDPY+DMI+ DGI++LCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI GLQ
Sbjct: 61  ELYSRYKDPYVDMIMADGISVLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFISGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFA 180
           +LGIDSL+KFRERI FMR ELKDEQKFREIYNFAF WAKEKGQKSLALDTAIGMWQLLFA
Sbjct: 121 ALGIDSLEKFRERIQFMRTELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFA 180

Query: 181 EKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
           EKQW LVDHWCQFLQA+HNKAISRDTWSQLLEFA+ 
Sbjct: 181 EKQWALVDHWCQFLQARHNKAISRDTWSQLLEFAKT 216

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557032|ref|XP_003546822.1| PREDICTED: uncharacterized protein LOC100527072 [Glycine max]

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/216 (86%), Positives = 203/216 (93%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDKLQQF++ITGASEK ALQALKASDWHLEGAFD FY+QPQ K+ TD+RHLE
Sbjct: 1   MHKLGRGHRDKLQQFITITGASEKIALQALKASDWHLEGAFDFFYNQPQLKTFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKD Y+DMIL DGIT+LCND+QVDPQDIVMLV+SWHMKA TMCEFSK+EFI GLQ
Sbjct: 61  ELYNRYKDAYVDMILADGITVLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFA 180
           SLGIDSLDKFRE+I +MR+ELKDEQKFREIYNFAF WAKEKGQKSLALDTAIGMWQLLFA
Sbjct: 121 SLGIDSLDKFREKIPYMRSELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFA 180

Query: 181 EKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
           EKQWPLVDHWCQFLQA+HNKAISRDTWSQLLEFA+ 
Sbjct: 181 EKQWPLVDHWCQFLQARHNKAISRDTWSQLLEFAKT 216

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343171976|gb|AEL98692.1| hypothetical protein, partial [Silene latifolia]

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 187/215 (86%), Positives = 199/215 (92%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           M KL R +R+KLQQF++IT ASEK ALQ LKASDWHLEGAFDVFYSQPQ KS TDTRHLE
Sbjct: 1   MSKLGRGHREKLQQFMAITAASEKVALQTLKASDWHLEGAFDVFYSQPQIKSFTDTRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKDPY DMIL DGITLLCNDLQVDPQDIVMLV+SWHMKAATMCEFSKQEFIGG Q
Sbjct: 61  ELYNRYKDPYADMILADGITLLCNDLQVDPQDIVMLVISWHMKAATMCEFSKQEFIGGWQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFA 180
           SLGIDSL+KFRERI ++R+ELKDEQKFREIY FAF WAKEKGQKSLA DTAIGMWQLLFA
Sbjct: 121 SLGIDSLEKFRERIPYIRSELKDEQKFREIYIFAFGWAKEKGQKSLAFDTAIGMWQLLFA 180

Query: 181 EKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFAR 215
           EKQWPL+DHWCQFLQA+HNKAISRDTW+QLLEF R
Sbjct: 181 EKQWPLIDHWCQFLQARHNKAISRDTWAQLLEFVR 215

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449519908|ref|XP_004166976.1| PREDICTED: DCN1-like protein 2-like [Cucumis sativus]

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 188/221 (85%), Positives = 205/221 (92%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL+R +RDKL QF++ITG SEK A QALKASDWHLEGAFDVFYSQPQ K+ TD+RHLE
Sbjct: 1   MHKLTRGHRDKLHQFMAITGTSEKVAHQALKASDWHLEGAFDVFYSQPQIKAFTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKD Y+DMIL DGI+LLC+DLQVDPQDIVMLVVSWHMKA TMCEFSKQEFIGGLQ
Sbjct: 61  ELYNRYKDSYVDMILADGISLLCDDLQVDPQDIVMLVVSWHMKANTMCEFSKQEFIGGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFA 180
           +LGIDSL++FRERI +MR+ELKD+QKFREIYNFAF WAKEKGQKSLALDTAIGMWQLLFA
Sbjct: 121 ALGIDSLERFRERIPYMRSELKDDQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFA 180

Query: 181 EKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTL 221
           EKQW LVDHWCQFLQA+HNKAISRDTWSQLLEFAR  + TL
Sbjct: 181 EKQWLLVDHWCQFLQARHNKAISRDTWSQLLEFARTVEPTL 221

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500426|gb|AFK38279.1| unknown [Lotus japonicus]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 185/216 (85%), Positives = 203/216 (93%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           MHKL R +RDKLQQF++ITGASEK ALQ+LKASDWHLEGAFD FYSQPQ K+ TD+RHLE
Sbjct: 1   MHKLGRGHRDKLQQFITITGASEKVALQSLKASDWHLEGAFDFFYSQPQLKASTDSRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           ELYNRYKD Y+DMIL DGITLLCND+QVDPQDIVMLV+SWHMKA TMCEFSK+EFI GLQ
Sbjct: 61  ELYNRYKDQYVDMILADGITLLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFA 180
           SLGIDSL+KFRE+I +MR+ELKDE KFR+IYNFAF+WAKEKGQKSLALDTAIGMWQLLFA
Sbjct: 121 SLGIDSLEKFREKIPYMRSELKDEYKFRDIYNFAFSWAKEKGQKSLALDTAIGMWQLLFA 180

Query: 181 EKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
           EKQWPLVDHWCQFLQA+HNKAISRDTWSQLLEFA+ 
Sbjct: 181 EKQWPLVDHWCQFLQARHNKAISRDTWSQLLEFAKT 216

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343171974|gb|AEL98691.1| hypothetical protein, partial [Silene latifolia]

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 187/215 (86%), Positives = 199/215 (92%)

Query: 1   MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLE 60
           M KL R +R+KLQQF++IT ASEK ALQ LKASDWHLEGAFDVFYSQPQ KS TDTRHLE
Sbjct: 1   MSKLGRGHREKLQQFMAITAASEKVALQTLKASDWHLEGAFDVFYSQPQIKSFTDTRHLE 60

Query: 61  ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ 120
           E YNRYKDPY DMILVDGITLLCNDLQVDPQDIVMLV+SWHMKAATMCEFSKQEFIGG Q
Sbjct: 61  EHYNRYKDPYADMILVDGITLLCNDLQVDPQDIVMLVISWHMKAATMCEFSKQEFIGGWQ 120

Query: 121 SLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFA 180
           SLGIDSL+KFRERI ++R+ELKDEQKFREIY FAF WAKEKGQKSLA DTAIGMWQLLFA
Sbjct: 121 SLGIDSLEKFRERIPYIRSELKDEQKFREIYIFAFGWAKEKGQKSLAFDTAIGMWQLLFA 180

Query: 181 EKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFAR 215
           EKQWPL+DHWCQFLQA+HNKAISRDTW+QLLEF R
Sbjct: 181 EKQWPLIDHWCQFLQARHNKAISRDTWAQLLEFVR 215

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	242
TAIR|locus:2087720	250	AT3G12760 "AT3G12760" [Arabido	0.892	0.864	0.788	1e-93
MGI|MGI:2142792	259	Dcun1d2 "DCN1, defective in cu	0.888	0.830	0.412	3.8e-46
ZFIN|ZDB-GENE-030131-5443	282	dcun1d1 "DCN1, defective in cu	0.880	0.755	0.436	3.8e-46
UNIPROTKB|Q96GG9	259	DCUN1D1 "DCN1-like protein 1"	0.880	0.822	0.425	2.1e-45
UNIPROTKB|I3L7H0	259	DCUN1D1 "Uncharacterized prote	0.880	0.822	0.425	2.1e-45
UNIPROTKB|Q5ZKU1	259	DCUN1D1 "DCN1-like protein 1"	0.880	0.822	0.420	7.1e-45
UNIPROTKB|E2QV42	262	DCUN1D1 "Uncharacterized prote	0.876	0.809	0.422	7.1e-45
UNIPROTKB|F1NPG9	258	DCUN1D1 "DCN1-like protein 1"	0.876	0.821	0.418	2.4e-44
UNIPROTKB|F1MDM6	244	DCUN1D1 "Uncharacterized prote	0.805	0.799	0.418	2.6e-40
ZFIN|ZDB-GENE-040625-171	204	dcun1d2 "DCN1, defective in cu	0.681	0.808	0.431	1.1e-34

TAIR|locus:2087720 AT3G12760 "AT3G12760" [Arabidopsis thaliana (taxid:3702)]

 Score = 933 (333.5 bits), Expect = 1.0e-93, P = 1.0e-93
 Identities = 171/217 (78%), Positives = 195/217 (89%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKS-LTDTRHL 59
             MHKLSRSNRDKLQQFV+ITGASEK ALQALKASDWHLE AFDVFYSQPQ +S   + R L
Sbjct:     1 MHKLSRSNRDKLQQFVAITGASEKNALQALKASDWHLEAAFDVFYSQPQPRSNAAEVRRL 60

Query:    60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL 119
             EELYNRYKDPY DMIL +GI++LCNDL+V+PQDIV LV+SWHM AAT CEFS+QEFI GL
Sbjct:    61 EELYNRYKDPYSDMILAEGISVLCNDLEVEPQDIVTLVLSWHMNAATACEFSRQEFISGL 120

Query:   120 QSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLF 179
             Q+LG+DS+ K +E++ FMR+ELKDEQKF EIYNFAF WAKEKGQKSLALDTAIGMWQLLF
Sbjct:   121 QALGVDSIGKLQEKLPFMRSELKDEQKFHEIYNFAFGWAKEKGQKSLALDTAIGMWQLLF 180

Query:   180 AEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
             AE++WPLV HWC FLQ +HNKAIS+DTW+QLLEF+R+
Sbjct:   181 AEREWPLVTHWCDFLQDRHNKAISKDTWAQLLEFSRM 217

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

MGI|MGI:2142792 Dcun1d2 "DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 92/223 (41%), Positives = 142/223 (63%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
             MHKL  + +DK++QF++ T ASE+ A+  L  ++W L+ A D F+  P++      KS  
Sbjct:     1 MHKLKSAQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSV 60

Query:    55 DTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
             D + LE+LY+RYKDP  +  I +DGI   C+DL +DP  I +LV++W  +AAT CEFSK+
Sbjct:    61 DQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKK 120

Query:   114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
             EF+ G+  LG DS ++ +  +  +  ELKD  KF+++Y F F +AK  GQK L L+ A+ 
Sbjct:   121 EFVDGMTELGCDSTERLKALLPRLEQELKDPAKFKDLYQFTFTFAKNPGQKGLDLEMAVA 180

Query:   174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
              W+L+ + + +  +D W  FL   H ++I RDTW+ LL+F  +
Sbjct:   181 YWKLVLSGR-FKFLDLWNTFLLEHHKRSIPRDTWNLLLDFGNM 222

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-030131-5443 dcun1d1 "DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 96/220 (43%), Positives = 141/220 (64%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP----QS-KSLTD 55
             M+KL  S +DK++QF+  T ++EK AL  L  +DW L+ A D F+  P    Q+ K   D
Sbjct:    26 MNKLKSSQKDKVRQFMIFTQSNEKTALNCLSQNDWKLDVATDNFFQHPDLYVQNLKGTLD 85

Query:    56 TRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQE 114
              + LE+LYNRY+DP  D  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQE
Sbjct:    86 RKKLEQLYNRYRDPQDDNKIGIDGIQQFCDDLGLDPASISVLLIAWKFRAATQCEFSKQE 145

Query:   115 FIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGM 174
             F+ G+   G DS++K + ++  M  ELKD+ KF++ Y F F +AK  GQK L L+ AI  
Sbjct:   146 FMEGMAEQGCDSIEKLKAQLPRMEQELKDQGKFKDFYQFTFNFAKNPGQKGLDLEMAIAY 205

Query:   175 WQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFA 214
             W L+ A + +  +D W +FL   H ++I +DTW+ LL+F+
Sbjct:   206 WNLILAGR-FKFLDLWNKFLLEHHKRSIPKDTWNLLLDFS 244

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q96GG9 DCUN1D1 "DCN1-like protein 1" [Homo sapiens (taxid:9606)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 94/221 (42%), Positives = 139/221 (62%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
             M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct:     1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query:    55 DTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
             D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQ
Sbjct:    61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query:   114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
             EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI 
Sbjct:   121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA 180

Query:   174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFA 214
              W L+    ++  +D W +FL   H ++I +DTW+ LL+F+
Sbjct:   181 YWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFS 220

GO:0008150 "biological_process" evidence=ND

GO:0000151 "ubiquitin ligase complex" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|I3L7H0 DCUN1D1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 94/221 (42%), Positives = 139/221 (62%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
             M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct:     1 MNKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query:    55 DTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
             D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQ
Sbjct:    61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQ 120

Query:   114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
             EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI 
Sbjct:   121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA 180

Query:   174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFA 214
              W L+    ++  +D W +FL   H ++I +DTW+ LL+F+
Sbjct:   181 YWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFS 220

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|Q5ZKU1 DCUN1D1 "DCN1-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 93/221 (42%), Positives = 138/221 (62%)

Query:     1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLT 54
             M+KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   
Sbjct:     1 MNKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSL 60

Query:    55 DTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
             D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSK 
Sbjct:    61 DRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKL 120

Query:   114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
             EF+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI 
Sbjct:   121 EFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIA 180

Query:   174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFA 214
              W L+    ++  +D W +FL   H ++I +DTW+ LL+F+
Sbjct:   181 YWNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFS 220

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|E2QV42 DCUN1D1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 93/220 (42%), Positives = 138/220 (62%)

Query:     2 HKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTD 55
             +KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D
Sbjct:     5 NKLKSSQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 64

Query:    56 TRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQE 114
              + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQE
Sbjct:    65 RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQE 124

Query:   115 FIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGM 174
             F+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI  
Sbjct:   125 FMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAY 184

Query:   175 WQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFA 214
             W L+    ++  +D W +FL   H ++I +DTW+ LL+F+
Sbjct:   185 WNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFS 223

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|F1NPG9 DCUN1D1 "DCN1-like protein 1" [Gallus gallus (taxid:9031)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 92/220 (41%), Positives = 137/220 (62%)

Query:     2 HKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTD 55
             +KL  S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D
Sbjct:     1 NKLKSSQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLD 60

Query:    56 TRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQE 114
              + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSK E
Sbjct:    61 RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKLE 120

Query:   115 FIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGM 174
             F+ G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI  
Sbjct:   121 FMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAY 180

Query:   175 WQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFA 214
             W L+    ++  +D W +FL   H ++I +DTW+ LL+F+
Sbjct:   181 WNLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFS 219

GO:0000151 "ubiquitin ligase complex" evidence=IEA

UNIPROTKB|F1MDM6 DCUN1D1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 85/203 (41%), Positives = 126/203 (62%)

Query:    19 TGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD 72
             T +SEK A+  L  +DW L+ A D F+  P+       K   D + LE+LY+RYKDP  +
Sbjct:     4 TQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYSRYKDPQDE 63

Query:    73 -MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 131
               I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF+ G+  LG DS++K +
Sbjct:    64 NKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLK 123

Query:   132 ERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWC 191
              +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI  W L+    ++  +D W 
Sbjct:   124 AQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVL-NGRFKFLDLWN 182

Query:   192 QFLQAKHNKAISRDTWSQLLEFA 214
             +FL   H ++I +DTW+ LL+F+
Sbjct:   183 KFLLEHHKRSIPKDTWNLLLDFS 205

GO:0000151 "ubiquitin ligase complex" evidence=IEA

ZFIN|ZDB-GENE-040625-171 dcun1d2 "DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 72/167 (43%), Positives = 105/167 (62%)

Query:    51 KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE 109
             K+  D R L+ LY+RYKDP  +  I VDGI   C+DL +DP  + +L+V+W  +AAT CE
Sbjct:     2 KTAVDRRKLDLLYSRYKDPQDENKIGVDGIQQFCDDLMLDPASVSVLIVAWKFRAATQCE 61

Query:   110 FSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALD 169
             FS+QEF+ G+  LG DS +K +  +  +  ELKD  KFR+ Y F F++AK  GQK L L+
Sbjct:    62 FSRQEFLDGMTDLGCDSPEKLKSLLPRLEQELKDSGKFRDFYRFTFSFAKSPGQKCLDLE 121

Query:   170 TAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
              A+  W L+ + + +  +  W  FL   H K+I +DTW+ LL+F  +
Sbjct:   122 MAVAYWNLILSGR-FKFLGLWNTFLLEHHKKSIPKDTWNLLLDFGNM 167

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8BZJ7	DCNL2_MOUSE	No assigned EC number	0.4125	0.8884	0.8301	yes	no
Q5ZKU1	DCNL1_CHICK	No assigned EC number	0.4208	0.8801	0.8223	yes	no
Q6PH85	DCNL2_HUMAN	No assigned EC number	0.4125	0.8884	0.8301	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	242
pfam03556	117	pfam03556, Cullin_binding, Cullin binding	3e-38

>gnl|CDD|217613 pfam03556, Cullin_binding, Cullin binding

 Score =  129 bits (326), Expect = 3e-38
 Identities = 44/90 (48%), Positives = 70/90 (77%), Gaps = 1/90 (1%)

Query: 127 LDKFRERISFMRAELK-DEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWP 185
           ++K + ++  +R+ELK D +KF+++Y F F +A+E+GQKSL L+TAI  W+LLF  + +P
Sbjct: 1   IEKLKAKLPELRSELKSDPEKFKDLYRFTFDFAREEGQKSLDLETAIEYWKLLFGSRTFP 60

Query: 186 LVDHWCQFLQAKHNKAISRDTWSQLLEFAR 215
           L+D W +FL+ KH K+IS+DTW+ LLEF++
Sbjct: 61  LLDQWIEFLEEKHKKSISKDTWNMLLEFSK 90

This domain binds to cullins and to Rbx-1, components of an E3 ubiquitin ligase complex for neddylation. Neddylation is the process by which the C-terminal glycine of the ubiquitin-like protein Nedd8 is covalently linked to lysine residues in a protein through an isopeptide bond. The structure of this domain is composed entirely of alpha helices. Length = 117

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	242
KOG3077	260	consensus Uncharacterized conserved protein [Funct	100.0
PF03556	117	Cullin_binding: Cullin binding; InterPro: IPR00517	100.0
PF14555	43	UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A	99.37
smart00804	63	TAP_C C-terminal domain of vertebrate Tap protein.	97.69
PF03943	51	TAP_C: TAP C-terminal domain; InterPro: IPR005637	97.56
KOG1364	356	consensus Predicted ubiquitin regulatory protein,	97.17
PF00627	37	UBA: UBA/TS-N domain; InterPro: IPR000449 UBA doma	96.73
smart00165	37	UBA Ubiquitin associated domain. Present in Rad23,	95.64
cd00194	38	UBA Ubiquitin Associated domain. The UBA domain is	95.46
PTZ00184	149	calmodulin; Provisional	94.43
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	93.96
KOG3077	260	consensus Uncharacterized conserved protein [Funct	93.84
PTZ00183	158	centrin; Provisional	93.18
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	92.85
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	92.28
KOG2086	380	consensus Protein tyrosine phosphatase SHP1/Cofact	91.98
cd00052	67	EH Eps15 homology domain; found in proteins implic	91.31
TIGR00264	116	alpha-NAC-related protein. This hypothetical prote	91.28
PTZ00183	158	centrin; Provisional	91.24
PRK06369	115	nac nascent polypeptide-associated complex protein	91.22
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	90.06
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	90.04
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	89.97
PTZ00184	149	calmodulin; Provisional	88.97
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	87.48
TIGR01446	73	DnaD_dom DnaD and phage-associated domain. This mo	87.24
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	85.84
COG1308	122	EGD2 Transcription factor homologous to NACalpha-B	85.27
cd00213	88	S-100 S-100: S-100 domain, which represents the la	85.02
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	83.67
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	83.47
PF09279	83	EF-hand_like: Phosphoinositide-specific phospholip	83.47
smart00546	43	CUE Domain that may be involved in binding ubiquit	82.36
KOG4351	244	consensus Uncharacterized conserved protein [Funct	82.12
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	81.51
KOG2756	349	consensus Predicted Mg2+-dependent phosphodiestera	80.87

>KOG3077 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.4e-65  Score=454.00  Aligned_cols=233  Identities=48%  Similarity=0.850  Sum_probs=222.8

Q ss_pred             CCCCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhh-hhhhccccCC------CCcCCHHHHHHHHHHhcCCCC-C
Q 026176            1 MHKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGA-FDVFYSQPQS------KSLTDTRHLEELYNRYKDPYL-D   72 (242)
Q Consensus         1 m~~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A-~~~ff~~~~~------~~~~~~~~l~~lFd~Y~d~~~-d   72 (242)
                      |++|+..+++++++|+.+|++++.++..++++++|+++.| .+.||.++..      .++.+.+.++++|++|+||+. +
T Consensus         1 mnklk~~~~d~~~~~~~~~~~~~~~s~~~~~~~dw~~~~~~~~s~~~~~~~~~~~~~~~~~s~~~l~~~f~~y~d~~d~~   80 (260)
T KOG3077|consen    1 MNKLKSSQKDKFEQFMSFTASRKKTSLSCLAACDWNLKYAFNDSYYTNPQSLREESVQARVSEKRLEELFNQYKDPDDDN   80 (260)
T ss_pred             CCccchhHHHHHHhhcccccccchhhhhhhcccccccchhcccchhcchhHHHHhhhhccccHHHHHHHHHHhcCccccc
Confidence            8999999999999999999999999999999999999999 6777777632      246788999999999999976 5


Q ss_pred             ccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHHHHHHccchHHHHHHHH
Q 026176           73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYN  152 (242)
Q Consensus        73 ~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l~~~l~~~~~Fk~~Y~  152 (242)
                      .|++|||.+||+||||+|+|+++|||||+|+|++||+|||++|+.||.+++|||+++||.+|+.++..+.|.+.||.+|+
T Consensus        81 ~i~~dgi~~fc~dlg~~p~~i~~LvlAwkl~A~~m~~Fsr~ef~~g~~~l~~dS~d~lq~~l~~l~~~l~d~~~Fk~iY~  160 (260)
T KOG3077|consen   81 LIGPDGIEKFCEDLGVEPEDISVLVLAWKLGAATMCEFSREEFLKGMTALGCDSIDKLQQRLDFLRSVLKDLEKFKSIYR  160 (260)
T ss_pred             ccChHHHHHHHHHhCCCchhHHHHHHHHHhccchhhhhhHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHccHHHhhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998888999999


Q ss_pred             HHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhhcCCCCCHhhhHHHHHHHHhhccccCCccccchhhH
Q 026176          153 FAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTLHYQTMMQKAHG  232 (242)
Q Consensus       153 f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~~~k~IskD~W~~~l~F~~~~~~~l~~~de~~aWP~  232 (242)
                      |||+|++++|||+|++++||+||.+||+.+ +|++++|++||++++++.|+||||||+|+|.++++.++++||||+|||.
T Consensus       161 faf~fa~e~~qk~Ld~~~ai~~w~ll~~~~-~pll~~w~~FL~~~~~~~~~KDtW~~~l~Fs~~i~~dlSnYDeegAWP~  239 (260)
T KOG3077|consen  161 FAFNFAKEPGQKSLDLETAISLWKLLFGQT-PPLLDQWIQFLKDSPNRAISKDTWNLLLDFSKTIDPDLSNYDEEGAWPV  239 (260)
T ss_pred             hhhhhccCcCcCcCCHHHHHHHHHHHhCCC-CchHHHHHHHHHhCcCcccCcccHHHHHHHHHhcCccccCccccccchH
Confidence            999999999999999999999999999766 9999999999999999999999999999999999999999999999999


Q ss_pred             HH
Q 026176          233 LI  234 (242)
Q Consensus       233 l~  234 (242)
                      ||
T Consensus       240 li  241 (260)
T KOG3077|consen  240 LI  241 (260)
T ss_pred             HH
Confidence            97

>PF03556 Cullin_binding: Cullin binding; InterPro: IPR005176 The eukaryotic defective in cullin neddylation (DCN) protein family, may contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes

Probab=100.00  E-value=2.1e-38  Score=253.13  Aligned_cols=108  Identities=41%  Similarity=0.783  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHHHcc-chHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhhcCCCCCHh
Q 026176          127 LDKFRERISFMRAELK-DEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRD  205 (242)
Q Consensus       127 i~~lk~~l~~l~~~l~-~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~~~k~IskD  205 (242)
                      |++||++|++|+++|. +++.|++||+|||+|+|++|||+|++|+||+||++||+++.+|++++|++||+++++|+||||
T Consensus         1 I~~lk~~l~~l~~~l~~d~~~F~~~Y~f~F~~~~~~~qr~l~~e~Ai~~W~llf~~~~~~~l~~w~~Fl~~~~~k~IskD   80 (117)
T PF03556_consen    1 IDKLKQKLPELRKELRSDPEYFKKFYRFTFDFAREEGQRSLPLETAIAYWRLLFSGRFFPLLDSWIEFLEEKYKKAISKD   80 (117)
T ss_dssp             HHHHHHCHHHHHHHCCHSHHHHHHHHHHHHHHHS-TT-SSEEHHHHHHHHHHHTTTTSSCCHHHHHHHHHHCT-SEEEHH
T ss_pred             CHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHhCCcccCCCCHHHHHHHHHHHcCCCCcHHHHHHHHHHHHcCCcCcChh
Confidence            6899999999999998 677799999999999999999999999999999999998878999999999999999999999


Q ss_pred             hhHHHHHHHHhhccccCCccccchhhHHH
Q 026176          206 TWSQLLEFARVRQWTLHYQTMMQKAHGLI  234 (242)
Q Consensus       206 ~W~~~l~F~~~~~~~l~~~de~~aWP~l~  234 (242)
                      +|+|+++|+++++.++++|||++|||+||
T Consensus        81 ~W~~~l~F~~~~~~dls~Yde~~AWP~li  109 (117)
T PF03556_consen   81 TWNQFLDFFKTVDEDLSNYDEEGAWPSLI  109 (117)
T ss_dssp             HHHHHHHHHHH-HCCHCC--TTSSS-HHH
T ss_pred             HHHHHHHHHHhcCccccCCCCCCCCcHHH
Confidence            99999999999999999999999999997

These multi-protein complexes are required for polyubiquitination and subsequent degradation of target proteins by the 26S proteasome []. Proteins in the DCN family include: Yeast DCN1. Vertebrate DCN1-like protein 1. Vertebrate DCN1-like protein 2. Vertebrate DCN1-like protein 4. This entry represents a domain found within DCN family proteins. Its function is unknown but it has been suggested that it has the features of a basic helix-loop-helix leucine zipper (bHLH-ZIP) domain [].It is often found in association with a UBA-like domain (IPR009060 from INTERPRO).; PDB: 3TDI_A 2IS9_A 3O6B_E 3O2P_A 3BQ3_A 3TDZ_A 3TDU_B.

>PF14555 UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A 2L4F_A 2DZL_A 2L2D_A 2DAM_A 1V92_A 3E21_A

Probab=99.37  E-value=4.7e-13  Score=88.80  Aligned_cols=41  Identities=41%  Similarity=0.793  Sum_probs=36.3

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccccC
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (242)
                      +++|++||+|||+++.+|++||+.++|||+.||+.||+++.
T Consensus         1 ~e~i~~F~~iTg~~~~~A~~~L~~~~wdle~Av~~y~~~~~   41 (43)
T PF14555_consen    1 DEKIAQFMSITGADEDVAIQYLEANNWDLEAAVNAYFDDGE   41 (43)
T ss_dssp             HHHHHHHHHHH-SSHHHHHHHHHHTTT-HHHHHHHHHHSS-
T ss_pred             CHHHHHHHHHHCcCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999999999864

>smart00804 TAP_C C-terminal domain of vertebrate Tap protein

Probab=97.69  E-value=5.9e-05  Score=54.16  Aligned_cols=45  Identities=24%  Similarity=0.427  Sum_probs=41.4

Q ss_pred             CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccc
Q 026176            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (242)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (242)
                      .++..|.++|.+|+..||.+.+-++.+|+.++||++.|+..|-+-
T Consensus         7 ~~~~~q~~~v~~~~~~Tgmn~~~s~~cLe~~~Wd~~~Al~~F~~l   51 (63)
T smart00804        7 TLSPEQQEMVQAFSAQTGMNAEYSQMCLEDNNWDYERALKNFTEL   51 (63)
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            466788999999999999999999999999999999999999763

The vertebrate Tap protein is a member of the NXF family of shuttling transport receptors for the nuclear export of mRNA. Its most C-terminal domain is important for binding to FG repeat-containing nuclear pore proteins (FG-nucleoporins) and is sufficient to mediate shuttling. This domain forms a compact four-helix fold related to that of a UBA domain.

>PF03943 TAP_C: TAP C-terminal domain; InterPro: IPR005637 This entry contains the NXF family of shuttling transport receptors for nuclear export of mRNA, which include: vertebrate mRNA export factor TAP or nuclear RNA export factor 1 (NXF1)

Probab=97.56  E-value=5.7e-05  Score=51.92  Aligned_cols=39  Identities=26%  Similarity=0.422  Sum_probs=34.7

Q ss_pred             HHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176           10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus        10 ~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ++|.+|+..||.+.+-|..||+.++||++.|+..|-...
T Consensus         2 ~mv~~~s~~Tgmn~~~s~~CL~~n~Wd~~~A~~~F~~l~   40 (51)
T PF03943_consen    2 EMVQQFSQQTGMNLEWSQKCLEENNWDYERALQNFEELK   40 (51)
T ss_dssp             HHHHHHHHHCSS-CCHHHHHHHHTTT-CCHHHHHHHHCC
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            689999999999999999999999999999999998654

Caenorhabditis elegans nuclear RNA export factor 1 (nxf-1). yeast mRNA export factor MEX67. Members of the NXF family have a modular structure. A nuclear localization sequence and a noncanonical RNA recognition motif (RRM) (see PDOC00030 from PROSITEDOC) followed by four LRR repeats are located in its N-terminal half. The C-terminal half contains a NTF2 domain (see PDOC50177 from PROSITEDOC) followed by a second domain, TAP-C. The TAP-C domain is important for binding to FG repeat-containing nuclear pore proteins (FG-nucleoporins) and is sufficient to mediate nuclear shuttling [,]. The Tap-C domain is made of four alpha helices packed against each other. The arrangement of helices 1, 2 and 3 is similar to that seen in a UBA fold. and is joined to the next module by flexible 12-residue Pro-rich linker [, ].; GO: 0051028 mRNA transport, 0005634 nucleus; PDB: 1OAI_A 1GO5_A 2KHH_A 2JP7_A.

>KOG1364 consensus Predicted ubiquitin regulatory protein, contains UAS and UBX domains [Posttranslational modification, protein turnover, chaperones]

Probab=97.17  E-value=0.00035  Score=65.12  Aligned_cols=44  Identities=32%  Similarity=0.583  Sum_probs=40.8

Q ss_pred             CcchHHHHHHHHhhhC-CCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            5 SRSNRDKLQQFVSITG-ASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         5 ~~~q~~~i~~F~~~T~-~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      +.+++++|.+|+.||+ .+.+.|++||++.+|+++.||+.||++.
T Consensus         3 ~~~~~~lv~~fl~It~~~t~e~A~q~L~~~~~~le~ai~Lffe~~   47 (356)
T KOG1364|consen    3 TGAQRALVSKFLAITVQQTVEIATQYLSAADWDLEAAINLFFEHG   47 (356)
T ss_pred             cchHHHHHHHHHHHhccccHHHHHHHHHhcCCcHHHHHHHHHHhc
Confidence            4568899999999999 7899999999999999999999999875

>PF00627 UBA: UBA/TS-N domain; InterPro: IPR000449 UBA domains are a commonly occurring sequence motif of approximately 45 amino acid residues that are found in diverse proteins involved in the ubiquitin/proteasome pathway, DNA excision-repair, and cell signalling via protein kinases []

Probab=96.73  E-value=0.0028  Score=40.28  Aligned_cols=33  Identities=36%  Similarity=0.528  Sum_probs=30.3

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhh
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFD   42 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~   42 (242)
                      .+.|++.+++ |.+++.|++.|+.++||++.|++
T Consensus         3 ~~~v~~L~~m-Gf~~~~~~~AL~~~~~nve~A~~   35 (37)
T PF00627_consen    3 EEKVQQLMEM-GFSREQAREALRACNGNVERAVD   35 (37)
T ss_dssp             HHHHHHHHHH-TS-HHHHHHHHHHTTTSHHHHHH
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHH
Confidence            5789999999 99999999999999999999986

The human homologue of yeast Rad23A is one example of a nucleotide excision-repair protein that contains both an internal and a C-terminal UBA domain. The solution structure of human Rad23A UBA(2) showed that the domain forms a compact three-helix bundle []. Comparison of the structures of UBA(1) and UBA(2) reveals that both form very similar folds and have a conserved large hydrophobic surface patch which may be a common protein-interacting surface present in diverse UBA domains. Evidence that ubiquitin binds to UBA domains leads to the prediction that the hydrophobic surface patch of UBA domains interacts with the hydrophobic surface on the five-stranded beta-sheet of ubiquitin []. This domain is similar in sequence to the N-terminal domain of translation elongation factor EF1B (or EF-Ts) from bacteria, mitochondria and chloroplasts. More information about EF1B (EF-Ts) proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0005515 protein binding; PDB: 2DAI_A 2OO9_C 2JUJ_A 1WHC_A 1YLA_A 2O25_B 3K9O_A 3K9P_A 3F92_A 3E46_A ....

>smart00165 UBA Ubiquitin associated domain

Probab=95.64  E-value=0.022  Score=35.76  Aligned_cols=35  Identities=31%  Similarity=0.527  Sum_probs=31.0

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhh
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVF   44 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~f   44 (242)
                      ++.|++++++ |.++..|++.|++++||++.|++-.
T Consensus         2 ~~~v~~L~~m-Gf~~~~a~~aL~~~~~d~~~A~~~L   36 (37)
T smart00165        2 EEKIDQLLEM-GFSREEALKALRAANGNVERAAEYL   36 (37)
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHH
Confidence            4678888888 9999999999999999999998753

Present in Rad23, SNF1-like kinases. The newly-found UBA in p62 is known to bind ubiquitin.

>cd00194 UBA Ubiquitin Associated domain

Probab=95.46  E-value=0.028  Score=35.42  Aligned_cols=36  Identities=31%  Similarity=0.490  Sum_probs=31.4

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhc
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (242)
                      .+.|++++++ |.++..|+..|+.++||++.|++-.+
T Consensus         2 ~~~v~~L~~m-Gf~~~~~~~AL~~~~~d~~~A~~~L~   37 (38)
T cd00194           2 EEKLEQLLEM-GFSREEARKALRATNNNVERAVEWLL   37 (38)
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence            3578888885 99999999999999999999997654

The UBA domain is a commonly occurring sequence motif in some members of the ubiquitination pathway, UV excision repair proteins, and certain protein kinases. Although its specific role is so far unknown, it has been suggested that UBA domains are involved in conferring protein target specificity. The domain, a compact three helix bundle, has a conserved GFP-loop and the proline is thought to be critical for binding. The UBA domain is distinct from the conserved three helical domain seen in the N-terminus of EF-TS and eukaryotic NAC proteins.

>PTZ00184 calmodulin; Provisional

Probab=94.43  E-value=1.8  Score=33.68  Aligned_cols=67  Identities=10%  Similarity=0.108  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .+.+.+.|..+-......|+.+-+..++..+|.+|.+..+-.+.-.+....-|.++.++|+..|...
T Consensus        10 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~   76 (149)
T PTZ00184         10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARK   76 (149)
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHh
Confidence            3567778877643334589999999999999999987777777777888888999999999988763

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=93.96  E-value=0.35  Score=31.25  Aligned_cols=61  Identities=11%  Similarity=0.073  Sum_probs=50.4

Q ss_pred             HHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHh
Q 026176           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (242)
Q Consensus        59 l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (242)
                      +.++|..|....++.|..+-+...++.+|..+.+..+-.+...+....-|.++.++|+..+
T Consensus         2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~   62 (63)
T cd00051           2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM   62 (63)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            5678888875556689999999999999988887777777788888788899999998754

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>KOG3077 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.84  E-value=0.2  Score=45.43  Aligned_cols=88  Identities=13%  Similarity=-0.062  Sum_probs=73.1

Q ss_pred             HHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhhcCCCCCHhhhHHHHHHHHhhccccCCcc
Q 026176          146 KFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQWTLHYQT  225 (242)
Q Consensus       146 ~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~~~k~IskD~W~~~l~F~~~~~~~l~~~d  225 (242)
                      ++.-.|...+.|+.+-|....++.++|-.|.+- ..+ ...+..|.-+-.-+.-...|-|+|.+.++|.+++-.+++.|.
T Consensus        79 ~~~i~~dgi~~fc~dlg~~p~~i~~LvlAwkl~-A~~-m~~Fsr~ef~~g~~~l~~dS~d~lq~~l~~l~~~l~d~~~Fk  156 (260)
T KOG3077|consen   79 DNLIGPDGIEKFCEDLGVEPEDISVLVLAWKLG-AAT-MCEFSREEFLKGMTALGCDSIDKLQQRLDFLRSVLKDLEKFK  156 (260)
T ss_pred             ccccChHHHHHHHHHhCCCchhHHHHHHHHHhc-cch-hhhhhHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHccHHHhh
Confidence            388889999999999999999999999999988 555 666777754443444589999999999999999867999999


Q ss_pred             ccchhhHHHH
Q 026176          226 MMQKAHGLIL  235 (242)
Q Consensus       226 e~~aWP~l~~  235 (242)
                      ..-.||-.|-
T Consensus       157 ~iY~faf~fa  166 (260)
T KOG3077|consen  157 SIYRFAFNFA  166 (260)
T ss_pred             HHHHhhhhhc
Confidence            8888876553

>PTZ00183 centrin; Provisional

Probab=93.18  E-value=3.5  Score=32.64  Aligned_cols=66  Identities=9%  Similarity=0.152  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .+.+.++|..+-......|+.+-+..++.-+|..+....+-.+.-.+....-|.|+.++|+..+..
T Consensus        16 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~   81 (158)
T PTZ00183         16 KKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTK   81 (158)
T ss_pred             HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            367778887765333458999999999999998877666666666677778899999999998765

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=92.85  E-value=0.36  Score=32.20  Aligned_cols=50  Identities=14%  Similarity=0.041  Sum_probs=45.5

Q ss_pred             CccChHHHHHHHHHcCCC-CCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           72 DMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        72 d~I~~dG~~~~~~DLgv~-~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..|+.+.+.+.+..+|+. +.+-.+=.|...+-...-|.|+.+||+..|+.
T Consensus         3 G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~   53 (54)
T PF13833_consen    3 GKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR   53 (54)
T ss_dssp             SEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred             CEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence            478999999999889999 88888899999999999999999999999875

...

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=92.28  E-value=0.57  Score=35.22  Aligned_cols=68  Identities=13%  Similarity=0.167  Sum_probs=53.9

Q ss_pred             HHHHHHHHHhcC-CC-CCccChHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 026176           57 RHLEELYNRYKD-PY-LDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (242)
Q Consensus        57 ~~l~~lFd~Y~d-~~-~d~I~~dG~~~~~~D-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (242)
                      ..+.+.|..|-+ +. ...|..+-+.+++..     +|..+....+--+.-.+....-|.|+.++|+..|..+.+
T Consensus         8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~   82 (94)
T cd05031           8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI   82 (94)
T ss_pred             HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence            567788999965 42 468999999998876     677876666666666778888899999999999988764

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>KOG2086 consensus Protein tyrosine phosphatase SHP1/Cofactor for p97 ATPase-mediated vesicle membrane fusion [Nuclear structure]

Probab=91.98  E-value=0.053  Score=51.41  Aligned_cols=41  Identities=29%  Similarity=0.330  Sum_probs=37.8

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccc
Q 026176            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (242)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (242)
                      ...+.+++|+++||.|+..|+.||...+|+++.|...+++.
T Consensus         3 ~p~~~ls~f~~~t~~se~~~~~~l~s~~~d~~~a~~~~~~~   43 (380)
T KOG2086|consen    3 IPLDSLSEFRAVTGPSESRARFYLESIYWDREAAHRSELEA   43 (380)
T ss_pred             CchhHHHHHhccCCCCccccccccccCCCchhhhhhhhccc
Confidence            34578999999999999999999999999999999999975

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=91.31  E-value=0.87  Score=31.02  Aligned_cols=62  Identities=8%  Similarity=0.060  Sum_probs=45.6

Q ss_pred             HHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        60 ~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      .+.|..+-......|..+.+.+++..+|++.+.+.-  +...+....-|.|+.++|+..|..+.
T Consensus         2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~--i~~~~d~~~~g~i~~~ef~~~~~~~~   63 (67)
T cd00052           2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQ--IWDLADTDKDGKLDKEEFAIAMHLIA   63 (67)
T ss_pred             hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHH--HHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence            357888743334589999999999999985444333  33456677789999999999987653

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>TIGR00264 alpha-NAC-related protein

Probab=91.28  E-value=0.31  Score=39.11  Aligned_cols=34  Identities=21%  Similarity=0.222  Sum_probs=31.0

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhh
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFD   42 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~   42 (242)
                      .+.|.-.++-||+|++.|+..|+++|||+-.|+-
T Consensus        79 ~eDI~lV~eq~gvs~e~A~~AL~~~~gDl~~AI~  112 (116)
T TIGR00264        79 EDDIELVMKQCNVSKEEARRALEECGGDLAEAIM  112 (116)
T ss_pred             HHHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHH
Confidence            4568889999999999999999999999999985

This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.

>PTZ00183 centrin; Provisional

Probab=91.24  E-value=1.4  Score=35.05  Aligned_cols=66  Identities=12%  Similarity=0.123  Sum_probs=42.6

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...+..+|..|-....+.|+.+.+..+|..+|..+.+-.+-.+...+....-|.|+.++|+..+..
T Consensus        89 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  154 (158)
T PTZ00183         89 REEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK  154 (158)
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            356677776664333446777777777777776665555555555565555677777777776654

>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed

Probab=91.22  E-value=0.31  Score=39.05  Aligned_cols=36  Identities=25%  Similarity=0.281  Sum_probs=32.2

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhh
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDV   43 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~   43 (242)
                      ..+.|.-.++-||+|++.|+..|+.+|+|+-.||-.
T Consensus        76 ~~edI~lv~~q~gvs~~~A~~AL~~~~gDl~~AI~~  111 (115)
T PRK06369         76 PEEDIELVAEQTGVSEEEARKALEEANGDLAEAILK  111 (115)
T ss_pred             CHHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHHHH
Confidence            356688899999999999999999999999999853

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=90.06  E-value=2  Score=32.32  Aligned_cols=67  Identities=15%  Similarity=0.159  Sum_probs=52.7

Q ss_pred             HHHHHHHHHhcCC-C-CCccChHHHHHHHHH---cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDP-Y-LDMILVDGITLLCND---LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~-~-~d~I~~dG~~~~~~D---Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..|.++|.+|... . .+.|..+.+.+++..   +|..+.+-.+--+-..+....-|.|+-++|+.-+.++-
T Consensus        10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~   81 (88)
T cd05029          10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA   81 (88)
T ss_pred             HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence            4677899999853 3 459999999999974   68777655565666677888889999999998887753

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>smart00027 EH Eps15 homology domain

Probab=90.04  E-value=1.2  Score=33.49  Aligned_cols=65  Identities=8%  Similarity=0.030  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.+.|..+-......|+.+-+.+.+..+|++.+.+.-+.  -.+....-|.|+.++|+..|..+
T Consensus         9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~--~~~d~~~~g~I~~~eF~~~~~~~   73 (96)
T smart00027        9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIW--NLADIDNDGELDKDEFALAMHLI   73 (96)
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHH--HHhcCCCCCCcCHHHHHHHHHHH
Confidence            467778888876544568999999999999998776655433  24566677999999999988774

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=89.97  E-value=1.5  Score=30.18  Aligned_cols=62  Identities=15%  Similarity=0.134  Sum_probs=44.0

Q ss_pred             HHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCc-hH---HHHHHHhhcccccccccHHHHHHHh
Q 026176           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD-IV---MLVVSWHMKAATMCEFSKQEFIGGL  119 (242)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed-~~---~LvLa~~l~a~~~g~~tr~eF~~g~  119 (242)
                      +|.++|+.|=......|+.+-+.+++..+|....+ ..   +-.+...+-...-|.|+.+||++.|
T Consensus         1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            47788998876656789999999999999987522 11   1122334456667899999998754

...

>PTZ00184 calmodulin; Provisional

Probab=88.97  E-value=2.1  Score=33.33  Aligned_cols=20  Identities=20%  Similarity=0.056  Sum_probs=10.7

Q ss_pred             cccccccHHHHHHHhHHcCC
Q 026176          105 ATMCEFSKQEFIGGLQSLGI  124 (242)
Q Consensus       105 ~~~g~~tr~eF~~g~~~l~~  124 (242)
                      ..-|.+++++|..+++.+|.
T Consensus        96 ~~~g~i~~~e~~~~l~~~~~  115 (149)
T PTZ00184         96 DGNGFISAAELRHVMTNLGE  115 (149)
T ss_pred             CCCCeEeHHHHHHHHHHHCC
Confidence            33455555555555555543

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=87.48  E-value=2.3  Score=31.76  Aligned_cols=67  Identities=12%  Similarity=0.140  Sum_probs=48.5

Q ss_pred             HHHHHHHHHhcCCC--CCccChHHHHHHHH-HcCCCCC----chHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPY--LDMILVDGITLLCN-DLQVDPQ----DIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~--~d~I~~dG~~~~~~-DLgv~~e----d~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..|...|.+|...+  .+.|..+-+..++. .+|-.+.    +-.+=-+...+....-|.|+-++|+..+..+.
T Consensus         8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~   81 (88)
T cd05030           8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVG   81 (88)
T ss_pred             HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence            46778999999663  46999999999997 4443232    33333444555777789999999999988763

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>TIGR01446 DnaD_dom DnaD and phage-associated domain

Probab=87.24  E-value=1.3  Score=31.63  Aligned_cols=56  Identities=7%  Similarity=0.211  Sum_probs=40.9

Q ss_pred             ccChHHHHHHHHHcCCCCCchHHHHHHHhh--cccccccccHHHHHHHhHHcCCCCHHHHH
Q 026176           73 MILVDGITLLCNDLQVDPQDIVMLVVSWHM--KAATMCEFSKQEFIGGLQSLGIDSLDKFR  131 (242)
Q Consensus        73 ~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l--~a~~~g~~tr~eF~~g~~~l~~dsi~~lk  131 (242)
                      ....+-+..++++.|.+|+ ++...+-+-+  +.++++.+.  ..+..|++-|+.|+++.+
T Consensus        15 ~~e~~~i~~~~~~~~~~~e-vI~~ai~~a~~~~~~~~~Yi~--~Il~~W~~~gi~T~e~~~   72 (73)
T TIGR01446        15 PFEMEDLKYWLDEFGNSPE-LIKEALKEAVSNNKANYKYID--AILNNWKNNGIKTVEDVE   72 (73)
T ss_pred             HHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHcCCCCHHHHH--HHHHHHHHcCCCCHHHHh
Confidence            4667888899999998754 6666666655  445555443  677779999999999875

This model represents the conserved domain of DnaD, part of Bacillus subtilis replication restart primosome, and of a number of phage-associated proteins. Members, both chromosomal or phage-associated, are found in the Bacillus/Clostridium group of Gram-positive bacteria.

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=85.84  E-value=5  Score=30.21  Aligned_cols=67  Identities=13%  Similarity=0.153  Sum_probs=49.2

Q ss_pred             HHHHHHHHHhcCCCCC--ccChHHHHHHHHH-c----CCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPYLD--MILVDGITLLCND-L----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d--~I~~dG~~~~~~D-L----gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..+.+.|.+|.+.+.|  .|+.+-+.+++.. +    +-.+.+-.+=-+...+....=|.|+-+||+.-+..+-
T Consensus        10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~   83 (93)
T cd05026          10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT   83 (93)
T ss_pred             HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence            3455669999976554  5999999999976 3    3333334455566667777789999999999888764

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>COG1308 EGD2 Transcription factor homologous to NACalpha-BTF3 [Transcription]

Probab=85.27  E-value=1.3  Score=35.80  Aligned_cols=35  Identities=20%  Similarity=0.299  Sum_probs=31.0

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhh
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDV   43 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~   43 (242)
                      .+-|.=-++=||+|++.|+..|+.+|.||-.||-.
T Consensus        85 eeDIkLV~eQa~VsreeA~kAL~e~~GDlaeAIm~  119 (122)
T COG1308          85 EEDIKLVMEQAGVSREEAIKALEEAGGDLAEAIMK  119 (122)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCcHHHHHHH
Confidence            34578889999999999999999999999999854

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=85.02  E-value=4.6  Score=29.52  Aligned_cols=66  Identities=12%  Similarity=0.100  Sum_probs=48.1

Q ss_pred             HHHHHHHHHhcC--CCCCccChHHHHHHHHH-cCCCC----CchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKD--PYLDMILVDGITLLCND-LQVDP----QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d--~~~d~I~~dG~~~~~~D-Lgv~~----ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      +.+.+.|..|-.  ...+.|..+.+.+++.. +|..+    ....+=-+.-.+....-|.|+-++|+..+..+
T Consensus         8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~   80 (88)
T cd00213           8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL   80 (88)
T ss_pred             HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence            567778999876  44568999999999976 56433    23334344455677778999999999988875

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=83.67  E-value=7.1  Score=29.38  Aligned_cols=67  Identities=13%  Similarity=0.121  Sum_probs=48.3

Q ss_pred             HHHHHHHHHhcCCCCC--ccChHHHHHHHHHc-----CCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPYLD--MILVDGITLLCNDL-----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d--~I~~dG~~~~~~DL-----gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..|.++|.+|.+.+.+  .|..+.+.++++.-     +-..++..+--+.-.+....=|.|+-+||+.-+.++-
T Consensus         9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~   82 (89)
T cd05023           9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA   82 (89)
T ss_pred             HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence            5678899999876543  79999999999875     2222333333444566777779999999998877763

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=83.47  E-value=7.5  Score=29.39  Aligned_cols=66  Identities=12%  Similarity=0.015  Sum_probs=50.2

Q ss_pred             HHHHHHHHHhcC-CCCCccChHHHHHHHHH-cCCCCCc-hHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKD-PYLDMILVDGITLLCND-LQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d-~~~d~I~~dG~~~~~~D-Lgv~~ed-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..|.+.|..|.. +..+.|+.+.+..++.. ||-...+ -.+=-+...+....=|.|+-+||+.-+..+
T Consensus         8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l   76 (89)
T cd05022           8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL   76 (89)
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            567789999976 56679999999999988 9844444 333344455677778999999999888775

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C

Probab=83.47  E-value=2.2  Score=31.12  Aligned_cols=63  Identities=11%  Similarity=0.221  Sum_probs=44.1

Q ss_pred             HHHHHHHHhcCCCCCccChHHHHHHHHHc----CCCCCchHHHHHHHhhc--ccccccccHHHHHHHhHH
Q 026176           58 HLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVMLVVSWHMK--AATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL----gv~~ed~~~LvLa~~l~--a~~~g~~tr~eF~~g~~~  121 (242)
                      .|..+|.+|.. +...|+.+++.+|+.+-    .++++.+.-++--+.-.  ....+.+|.++|+.-|..
T Consensus         1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S   69 (83)
T PF09279_consen    1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS   69 (83)
T ss_dssp             HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred             CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence            47889999987 56799999999999643    33445555554444222  235689999999987744

It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....

>smart00546 CUE Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs)

Probab=82.36  E-value=1.6  Score=28.21  Aligned_cols=38  Identities=13%  Similarity=0.265  Sum_probs=29.8

Q ss_pred             HHHHHHHhh-hCCCHHHHHHHHHhCCCCchhhhhhhccc
Q 026176           10 DKLQQFVSI-TGASEKAALQALKASDWHLEGAFDVFYSQ   47 (242)
Q Consensus        10 ~~i~~F~~~-T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (242)
                      +.|.+..++ =+.++...+..|+++++|++.|++...+.
T Consensus         4 ~~v~~L~~mFP~l~~~~I~~~L~~~~g~ve~~i~~LL~~   42 (43)
T smart00546        4 EALHDLKDMFPNLDEEVIKAVLEANNGNVEATINNLLEG   42 (43)
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHcC
Confidence            345555554 46689999999999999999999987654

CUE domains also occur in two protein of the IL-1 signal transduction pathway, tollip and TAB2. Ponting (Biochem. J.) "Proteins of the Endoplasmic reticulum" (in press)

>KOG4351 consensus Uncharacterized conserved protein [Function unknown]

Probab=82.12  E-value=0.48  Score=42.26  Aligned_cols=45  Identities=20%  Similarity=0.398  Sum_probs=39.3

Q ss_pred             CCcchHHHHHHHHhhhCCC--H-HHHHHHHHhCCCCchhhhhhhcccc
Q 026176            4 LSRSNRDKLQQFVSITGAS--E-KAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         4 l~~~q~~~i~~F~~~T~~s--~-~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      -+.++..+|-+|-.+++..  + ..|+.||+-.+|+|..|+..||+..
T Consensus        19 tt~dr~~Li~qf~~lm~~qm~P~~~aaF~Ld~knW~lqna~sv~~d~~   66 (244)
T KOG4351|consen   19 TTTDRPELIHQFQRLMNTQMNPMLSAAFVLDMKNWNLQNAGSVYWDQD   66 (244)
T ss_pred             CCCCcHHHHHHHHHHhhhccCcccccceeeeccceeccccccEEEcCC
Confidence            3566788999999998865  5 7799999999999999999999875

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=81.51  E-value=15  Score=29.67  Aligned_cols=83  Identities=14%  Similarity=0.207  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCC------CHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID------SLDK  129 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d------si~~  129 (242)
                      ...+.+.|..+-......|..+=+...+..||.+|....+-.+-..+....-|.|+.++|+.-|...+..      +.+.
T Consensus         7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~e   86 (151)
T KOG0027|consen    7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEE   86 (151)
T ss_pred             HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHH
Confidence            4678888888865545689999999999999999999999999999999999999999999999887643      2335


Q ss_pred             HHHHHHHHH
Q 026176          130 FRERISFMR  138 (242)
Q Consensus       130 lk~~l~~l~  138 (242)
                      ++....-+.
T Consensus        87 l~eaF~~fD   95 (151)
T KOG0027|consen   87 LKEAFRVFD   95 (151)
T ss_pred             HHHHHHHHc
Confidence            555544444

>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]

Probab=80.87  E-value=1.2  Score=41.10  Aligned_cols=40  Identities=23%  Similarity=0.434  Sum_probs=36.6

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ++++-+|..+|.+.+..|+.+|..++|+++.|++.||...
T Consensus        26 ~~ll~efa~~~s~dea~aq~~l~~~dw~~~ral~~~~~se   65 (349)
T KOG2756|consen   26 RLLCVEFASVASCDAAVAQCFLAENDWEMERALNSYFEPE   65 (349)
T ss_pred             HHHHHHHHHhhhhHHHhHHHHhhcchhHHHHHHHhhcCce
Confidence            4667889999999999999999999999999999999864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	242
3tdu_A	200	N-Terminal Acetylation Acts As An Avidity Enhancer		1e-36
4gao_A	200	Dcnl Complex With N-terminally Acetylated Nedd8 E2		6e-36
4gba_A	221	Dcnl Complex With N-terminally Acetylated Nedd8 E2		1e-33
3kev_A	199	X-Ray Crystal Structure Of A Dcun1 Domain-Containin		2e-33
3bq3_A	270	Crystal Structure Of S. Cerevisiae Dcn1 Length = 27		2e-10
2is9_A	204	Structure Of Yeast Dcn-1 Length = 204		1e-07
3o2p_A	202	A Dual E3 Mechanism For Rub1 Ligation To Cdc53: Dcn		1e-07

>pdb|3TDU|A Chain A, N-Terminal Acetylation Acts As An Avidity Enhancer Within An Interconnected Multiprotein Complex: Structure Of A Human Cul1whb- Dcn1p-Acetylated Ubc12n Complex Length = 200

Iteration: 1
 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 105/159 (66%), Gaps = 2/159 (1%)
Query: 57  RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEF 115
           + LE+LYNRYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF
Sbjct: 4   KKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEF 63
Query: 116 IGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMW 175
           + G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI  W
Sbjct: 64  MDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYW 123
Query: 176 QLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFA 214
            L+    ++  +D W +FL   H ++I +DTW+ LL+F+
Sbjct: 124 NLVL-NGRFKFLDLWNKFLLEHHKRSIPKDTWNLLLDFS 161

>pdb|4GAO|A Chain A, Dcnl Complex With N-terminally Acetylated Nedd8 E2 Peptide Length = 200

Iteration: 1
 Score =  147 bits (370), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 57  RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEF 115
           + LE LY RYKDP   + I VDGI   C+DL +DP  I +LV++W  +AAT CEFS++EF
Sbjct: 4   KKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKEF 63
Query: 116 IGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMW 175
           + G+  LG DS++K +  +  +  ELKD  KF++ Y F F +AK  GQK L L+ A+  W
Sbjct: 64  LDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFTFTFAKNPGQKGLDLEMAVAYW 123
Query: 176 QLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
           +L+ + + +  +D W  FL   H ++I RDTW+ LL+F  +
Sbjct: 124 KLVLSGR-FKFLDLWNTFLMEHHKRSIPRDTWNLLLDFGNM 163

>pdb|4GBA|A Chain A, Dcnl Complex With N-terminally Acetylated Nedd8 E2 Peptide Length = 221

Iteration: 1
 Score =  139 bits (351), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 102/164 (62%), Gaps = 4/164 (2%)
Query: 57  RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFI 116
           + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF 
Sbjct: 6   QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFF 65
Query: 117 GGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWA--KEKGQKSLALDTAIGM 174
            G +++  DS+D    R   +  E K E KF+++Y F F +    E+GQ+SL  + AI +
Sbjct: 66  DGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIAL 125
Query: 175 WQLLFAEKQWPLVDHWCQFLQAKHN--KAISRDTWSQLLEFARV 216
           W+L+F +   P++D W  FL    +  K ISRDTW+  L F +V
Sbjct: 126 WKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQV 169

>pdb|3KEV|A Chain A, X-Ray Crystal Structure Of A Dcun1 Domain-Containing Protein From Galdieria Sulfuraria Length = 199

Iteration: 1
 Score =  138 bits (348), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 110/165 (66%), Gaps = 2/165 (1%)
Query: 54  TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
            D + + EL+  YK+P  + I  +G+  L  D+QVDP D+V LV++W +KA++  EFS++
Sbjct: 4   ADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTXEFSEK 63
Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
           EF+ GL +L +DSL+K + ++S +R E++D  KFR  Y F F ++KE  Q+SL  +TA  
Sbjct: 64  EFVEGLANLQVDSLEKLKRKLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAXA 123
Query: 174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARVRQ 218
           +W +L    ++ L+D W +FL+  +  +ISRDTW+ L +F+++ +
Sbjct: 124 LWDVLL-RGRFSLLDSWLEFLK-NNTHSISRDTWNLLYDFSQLSE 166

>pdb|2IS9|A Chain A, Structure Of Yeast Dcn-1 Length = 204

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 76  VDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE-FSKQEFIGGLQSLGIDSLDKFRERI 134
           +D +     +L  + +D+  L ++  +    + E   +++F+      G  ++   +E I
Sbjct: 25  IDSLVKFIEELGYNLEDLATLCLAHLLGYKKLEEPLKREDFLSTWFMQGCSTISDMQECI 84
Query: 135 SFMRAEL-KDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWP------LV 187
             +  +L +D Q F +IYN+AF    +  +K +  D  I  W+L F + ++P      L+
Sbjct: 85  KTLDVKLHEDLQYFTQIYNYAFNLILDPNRKDIDTDEGIQYWKLFF-QPEYPVRMEPDLL 143
Query: 188 DHWCQFLQAKHNKAISRDTWSQLLEFAR 215
           + W +FL+ +    IS+DTW  LL F +
Sbjct: 144 EAWFRFLRDEGKTTISKDTWRMLLLFFK 171

>pdb|3O2P|A Chain A, A Dual E3 Mechanism For Rub1 Ligation To Cdc53: Dcn1(P)-Cdc53(Whb) Length = 202

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 76  VDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE-FSKQEFIGGLQSLGIDSLDKFRERI 134
           +D +     +L  + +D+  L ++  +    + E   +++F+      G  ++   +E I
Sbjct: 23  IDSLVKFIEELGYNLEDLATLCLAHLLGYKKLEEPLKREDFLSTWFMQGCSTISDMQECI 82
Query: 135 SFMRAEL-KDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWP------LV 187
             +  +L +D Q F +IYN+AF    +  +K +  D  I  W+L F + ++P      L+
Sbjct: 83  KTLDVKLHEDLQYFTQIYNYAFNLILDPNRKDIDTDEGIQYWKLFF-QPEYPVRMEPDLL 141
Query: 188 DHWCQFLQAKHNKAISRDTWSQLLEFAR 215
           + W +FL+ +    IS+DTW  LL F +
Sbjct: 142 EAWFRFLRDEGKTTISKDTWRMLLLFFK 169

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	242
3bq3_A	270	Defective in cullin neddylation protein 1; ubiquit	8e-64
3kev_A	199	Galieria sulfuraria DCUN1 domain-containing prote;	6e-62
3tdu_A	200	DCN1-like protein 1; E2:E3, ligase-protein binding	2e-60
1v92_A	46	NSFL1 cofactor P47; 3-helix bundle, recombination;	6e-06
2dal_A	62	Protein KIAA0794; FAS associted factor 1, UBA-like	9e-04

>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria} Length = 199

 Score =  191 bits (487), Expect = 6e-62
 Identities = 66/163 (40%), Positives = 111/163 (68%), Gaps = 2/163 (1%)

Query: 54  TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQ 113
            D + + EL+  YK+P  + I  +G+  L  D+QVDP D+V LV++W +KA++ CEFS++
Sbjct: 4   ADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEK 63

Query: 114 EFIGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIG 173
           EF+ GL +L +DSL+K + ++S +R E++D  KFR  Y F F ++KE  Q+SL  +TA+ 
Sbjct: 64  EFVEGLANLQVDSLEKLKRKLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAMA 123

Query: 174 MWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFARV 216
           +W +L    ++ L+D W +FL+  +  +ISRDTW+ L +F+++
Sbjct: 124 LWDVLLRG-RFSLLDSWLEFLK-NNTHSISRDTWNLLYDFSQL 164

>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A Length = 200

 Score =  187 bits (477), Expect = 2e-60
 Identities = 71/160 (44%), Positives = 105/160 (65%), Gaps = 2/160 (1%)

Query: 57  RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEF 115
           + LE+LYNRYKDP   + I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF
Sbjct: 4   KKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEF 63

Query: 116 IGGLQSLGIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMW 175
           + G+  LG DS++K + +I  M  ELK+  +F++ Y F F +AK  GQK L L+ AI  W
Sbjct: 64  MDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYW 123

Query: 176 QLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEFAR 215
            L+   + +  +D W +FL   H ++I +DTW+ LL+F+ 
Sbjct: 124 NLVLNGR-FKFLDLWNKFLLEHHKRSIPKDTWNLLLDFST 162

>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3 Length = 46

 Score = 41.4 bits (97), Expect = 6e-06
 Identities = 15/44 (34%), Positives = 26/44 (59%)

Query: 4  LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ 47
          ++   +D L++FV++TGA E  A   L+++ W L+ A   FY  
Sbjct: 1  MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYED 44

>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 62

 Score = 36.0 bits (82), Expect = 9e-04
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 9  RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
          +  +QQF +ITGASE      L+A + +LE A  +F 
Sbjct: 16 KGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFL 52

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	242
3bq3_A	270	Defective in cullin neddylation protein 1; ubiquit	100.0
3kev_A	199	Galieria sulfuraria DCUN1 domain-containing prote;	100.0
3tdu_A	200	DCN1-like protein 1; E2:E3, ligase-protein binding	100.0
4gba_A	221	DCN1-like protein 3; E3 ligase, ligase-peptide com	100.0
2dam_A	67	ETEA protein; KIAA0887, UBA-like domain, structura	99.41
2dal_A	62	Protein KIAA0794; FAS associted factor 1, UBA-like	99.37
1v92_A	46	NSFL1 cofactor P47; 3-helix bundle, recombination;	99.35
3e21_A	45	HFAF1, FAS-associated factor 1; UBA, alternative s	99.26
2dzl_A	66	Protein FAM100B; UBA-like domain, structural genom	99.2
2jp7_A	57	MRNA export factor MEX67; solution MEX67, UBA, tra	98.01
1oai_A	59	Nuclear RNA export factor; nuclear transport, nucl	97.95
4gew_A	362	5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy	97.72
1z96_A	40	DNA-damage, UBA-domain protein MUD1; ubiquitin, th	97.65
1wj7_A	104	Hypothetical protein (RSGI RUH-015); UBA domain, u	97.4
2l2d_A	73	OTU domain-containing protein 7A; UBA fold, struct	96.78
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	96.49
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	96.47
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	96.44
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	96.38
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	96.38
1y1x_A	191	Leishmania major homolog of programmed cell death	96.3
3fwb_A	161	Cell division control protein 31; gene gating, com	96.28
2g3q_A	43	Protein YBL047C; endocytosis, solution structure,	96.22
1ify_A	49	HHR23A, UV excision repair protein RAD23 homolog A	96.2
1dv0_A	47	DNA repair protein HHR23A; helical bundle, DNA bin	96.18
1jkg_B	250	TAP; NTF2-like domain, transport protein; 1.90A {H	96.15
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	96.13
1vg5_A	73	RSGI RUH-014, rhomboid family protein; UBA domain,	96.01
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	95.85
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	95.85
2jy5_A	52	Ubiquilin-1; UBA, alternative splicing, cytoplasm,	95.84
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	95.81
1veg_A	83	NEDD8 ultimate buster-1; ubiquitin associated doma	95.76
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	95.76
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	95.71
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	95.67
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	95.62
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	95.62
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	95.56
2jnf_A	158	Troponin C; stretch activated muscle contraction,	95.51
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	95.48
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	95.45
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	95.44
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	95.42
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	95.41
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	95.36
2knz_A	53	Ubiquilin-4; cytoplasm, endoplasmic reticulum, nuc	95.35
2dah_A	54	Ubiquilin-3; UBA domain, structural genomics, NPPS	95.29
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	95.21
1wji_A	63	Tudor domain containing protein 3; UBA domain, str	95.16
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	95.13
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	95.1
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	95.08
2dkl_A	85	Trinucleotide repeat containing 6C protein; TNRC6C	95.06
2dak_A	63	Ubiquitin carboxyl-terminal hydrolase 5; isopeptid	95.02
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	94.88
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	94.88
1wgn_A	63	UBAP1, ubiquitin associated protein; ubiquitin ass	94.86
1wiv_A	73	UBP14, ubiquitin-specific protease 14; ubiquitin a	94.84
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	94.83
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	94.8
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	94.8
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	94.74
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	94.71
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	94.66
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	94.65
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	94.59
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	94.58
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	94.54
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	94.48
2cp9_A	64	EF-TS, EF-TSMT, elongation factor TS, mitochondria	94.39
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	94.36
2ekk_A	47	UBA domain from E3 ubiquitin-protein ligase HUWE1;	94.3
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	94.29
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	94.29
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	94.21
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	94.13
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	94.1
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	94.1
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	94.08
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	94.05
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	94.05
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	94.04
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	94.01
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	93.99
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	93.98
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	93.94
3fwb_A	161	Cell division control protein 31; gene gating, com	93.92
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	93.9
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	93.81
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	93.8
2jnf_A	158	Troponin C; stretch activated muscle contraction,	93.75
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	93.7
3li6_A	66	Calcium-binding protein; calcium signaling protein	93.68
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	93.66
1wr1_B	58	Ubiquitin-like protein DSK2; UBA domain, UBA-ubiqu	93.62
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	93.6
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	93.55
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	93.55
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	93.52
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	93.48
1y1x_A	191	Leishmania major homolog of programmed cell death	93.48
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	93.47
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	93.41
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	93.4
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	93.39
2bwb_A	46	Ubiquitin-like protein DSK2; UBA, signaling protei	93.33
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	93.3
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	93.3
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	93.24
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	93.24
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	93.21
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	93.16
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	93.13
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	92.96
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	92.96
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	92.94
2cpw_A	64	CBL-interacting protein STS-1 variant; ubiquitin a	92.92
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	92.88
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	92.86
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	92.79
2dai_A	83	Ubadc1, ubiquitin associated domain containing 1;	92.78
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	92.5
1vej_A	74	Riken cDNA 4931431F19; UBA domain, three helix bun	92.44
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	92.43
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	92.43
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	92.37
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	92.35
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	92.19
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	92.18
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	92.09
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	92.08
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	92.05
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	92.05
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	91.95
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	91.93
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	91.92
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	91.89
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	91.87
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	91.71
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	91.7
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	91.7
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	91.66
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	91.62
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	91.56
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	91.55
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	91.55
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	91.5
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	91.5
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	91.47
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	91.47
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	91.46
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	91.36
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	91.36
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	91.32
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	91.32
2cwb_A	108	Chimera of immunoglobulin G binding protein G and	91.16
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	91.05
1whc_A	64	RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain	90.98
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	90.93
1c07_A	95	Protein (epidermal growth factor receptor pathway	90.84
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	90.79
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	90.72
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	90.7
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	90.66
2ooa_A	52	E3 ubiquitin-protein ligase CBL-B; alpha-helical d	90.61
2dag_A	74	Ubiquitin carboxyl-terminal hydrolase 5; isopeptid	90.58
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	90.57
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	90.53
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	90.48
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	90.46
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	90.4
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	90.32
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	90.27
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	90.25
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	90.24
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	90.23
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	90.22
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	90.21
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	90.17
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	90.11
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	90.11
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	90.09
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	90.04
1otr_A	49	Protein CUE2; protein-protein complex, cell cycle;	90.02
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	89.93
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	89.93
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	89.9
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	89.85
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	89.74
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	89.73
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	89.69
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	89.69
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	89.57
2d9s_A	53	CBL E3 ubiquitin protein ligase; UBA domain, dimer	89.57
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	89.55
1vek_A	84	UBP14, ubiquitin-specific protease 14, putative; U	89.48
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	89.45
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	89.45
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	89.09
1tr8_A	102	Conserved protein (MTH177); chaperones, nascent po	89.08
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	88.62
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	88.51
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	88.4
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	88.36
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	88.15
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	87.59
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	87.56
2lbc_A	126	Ubiquitin carboxyl-terminal hydrolase 13; tandem U	87.3
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	87.23
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	87.23
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	87.13
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	87.12
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	87.11
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	86.98
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	86.82
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	86.54
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	86.5
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	86.43
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	86.38
4ae4_A	118	Ubiquitin-associated protein 1; protein transport,	85.92
1vdl_A	80	Ubiquitin carboxyl-terminal hydrolase 25; UBA doma	85.75
2cp8_A	54	NEXT to BRCA1 gene 1 protein; UBA domain, structur	85.57
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	85.47
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	85.39
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	85.29
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	85.18
2dna_A	67	Unnamed protein product; ubiquitin associated doma	85.07
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	84.98
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	84.88
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	84.81
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	84.8
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	84.71
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	84.68
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	84.6
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	84.59
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	84.23
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	83.91
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	83.91
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	83.73
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	83.64
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	83.07
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	82.28
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	82.23
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	82.18
1wgl_A	59	TOLL-interacting protein; CUE domain, structural g	82.08
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	82.07
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	80.44
2jq6_A	139	EH domain-containing protein 1; metal binding prot	80.39

>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}

Probab=100.00  E-value=3.3e-68  Score=457.93  Aligned_cols=180  Identities=38%  Similarity=0.758  Sum_probs=170.4

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHH
Q 026176           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRE  132 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~  132 (242)
                      +.++++|+++|++|++|+++.||+||+++||+||||+|||+++|||||+|+|++||+|||+||++||+++||+|+++||+
T Consensus         3 ~~~~~~l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~~~LvLaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk~   82 (199)
T 3kev_A            3 RADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANLQVDSLEKLKR   82 (199)
T ss_dssp             -CCHHHHHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHTTCCSHHHHHH
T ss_pred             ccCHHHHHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCcccHHHHHHHHHHhCCCCHHHHHH
Confidence            56889999999999999767999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhhcCCCCCHhhhHHHHH
Q 026176          133 RISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLE  212 (242)
Q Consensus       133 ~l~~l~~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~~~k~IskD~W~~~l~  212 (242)
                      +|++|+++|+++..||+||+|||+|+|++|||+|++||||+||++||+++ ||++++|++||++++ |+||||||+|+++
T Consensus        83 ~l~~l~~~l~d~~~Fk~~Y~ftF~~~re~gqk~L~~e~Ai~~W~lll~~~-~~~l~~W~~FL~~~~-k~IskD~W~~~l~  160 (199)
T 3kev_A           83 KLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAMALWDVLLRGR-FSLLDSWLEFLKNNT-HSISRDTWNLLYD  160 (199)
T ss_dssp             HHHHHHHHTTSHHHHHHHHHHHHHHHSCTTCSSBCHHHHHHHHHHHHTTT-CTTHHHHHHHGGGCC-SCBCHHHHHHHHH
T ss_pred             HHHHHHHHccCHHHHHHHHHHHHHHHcCcCcCCCCHHHHHHHHHHHhCCc-cHHHHHHHHHHHhcC-CCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999987 999999999999888 9999999999999


Q ss_pred             HHHhhccccCCccccchhhHHH
Q 026176          213 FARVRQWTLHYQTMMQKAHGLI  234 (242)
Q Consensus       213 F~~~~~~~l~~~de~~aWP~l~  234 (242)
                      |++++++++++||+++|||+||
T Consensus       161 F~~~i~~dls~YDe~gAWP~li  182 (199)
T 3kev_A          161 FSQLSEKDLSDYDENGAWPVLI  182 (199)
T ss_dssp             HHTC--CTTTTCC---CCCHHH
T ss_pred             HHHHhcccccCCCCCCCchHHH
Confidence            9999999999999999999998

>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*

Probab=100.00  E-value=2.4e-68  Score=459.11  Aligned_cols=179  Identities=41%  Similarity=0.803  Sum_probs=175.2

Q ss_pred             CHHHHHHHHHHhcCCC-CCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHH
Q 026176           55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRER  133 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~-~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~  133 (242)
                      ++++|+++|++|+||+ +|.||+||+++||+||||+|||+++|||||+|+|++||+|||+||++||+++||+|+++||++
T Consensus         2 ~~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk~~   81 (200)
T 3tdu_A            2 SRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQ   81 (200)
T ss_dssp             CHHHHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHHTCSSHHHHHHT
T ss_pred             CHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHHccccHHHHHHH
Confidence            6789999999999986 589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhhcCCCCCHhhhHHHHHH
Q 026176          134 ISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLEF  213 (242)
Q Consensus       134 l~~l~~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~~~k~IskD~W~~~l~F  213 (242)
                      |++|+++|+++..||+||+|||+|+|++|||+|++|+||+||+|||+++ ||++++|++||+++++|+||||||+|+++|
T Consensus        82 l~~l~~~l~d~~~Fk~~Y~ftF~~~r~~gqk~L~~e~Ai~~W~lll~~~-~~~l~~W~~FL~~~~~k~IskD~W~~~l~F  160 (200)
T 3tdu_A           82 IPKMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGR-FKFLDLWNKFLLEHHKRSIPKDTWNLLLDF  160 (200)
T ss_dssp             HHHHHHHTTSHHHHHHHHHHHHHHHSCTTCSSEEHHHHHHHHHHHSTTS-CTTHHHHHHHHHHTTCCEECHHHHHHHHHH
T ss_pred             HHHHHHHccCHHHHHHHHHHHHHHHcCcCcCcCCHHHHHHHHHHHcCCC-chHHHHHHHHHHhcCCcCcCHhHHHHHHHH
Confidence            9999999999989999999999999999999999999999999999998 999999999999999999999999999999


Q ss_pred             HHhhccccCCccccchhhHHH
Q 026176          214 ARVRQWTLHYQTMMQKAHGLI  234 (242)
Q Consensus       214 ~~~~~~~l~~~de~~aWP~l~  234 (242)
                      ++++++++++||+++|||+||
T Consensus       161 ~~~i~~dls~YDe~gAWP~li  181 (200)
T 3tdu_A          161 STMIADDMSNYDEEGAWPVLI  181 (200)
T ss_dssp             HHHCCTTCTTCCTTSSCCHHH
T ss_pred             HHHhcccccCCCCCCCchHHH
Confidence            999999999999999999997

>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.7e-67  Score=457.17  Aligned_cols=182  Identities=37%  Similarity=0.727  Sum_probs=173.3

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHH
Q 026176           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRE  132 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~  132 (242)
                      +.+.++|+++|++|+|+++|.||+||+++||+||||+|||+++|||||+|+|++||+|||+||++||+++||||+++||+
T Consensus         2 ~~~~~~l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l~A~~mg~ftr~eF~~G~~~l~~dsi~~lk~   81 (221)
T 4gba_A            2 SSSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICA   81 (221)
T ss_dssp             ----CHHHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHTCSSHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHhCCCccCcCcHHHHHHHHHHhCcCCHHHHHH
Confidence            56788999999999999889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHccchHHHHHHHHHHhHhhhh--cCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhh--cCCCCCHhhhH
Q 026176          133 RISFMRAELKDEQKFREIYNFAFAWAKE--KGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAK--HNKAISRDTWS  208 (242)
Q Consensus       133 ~l~~l~~~l~~~~~Fk~~Y~f~F~f~k~--~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~--~~k~IskD~W~  208 (242)
                      +|+.|+++|+++..||+||+|||+|+|+  +|||+|++|+||+||+|||+++.+|++++|++||+++  ++|+||||||+
T Consensus        82 ~l~~L~~~l~d~~~Fk~~Y~ftF~~~~~~e~gqk~L~le~Ai~~W~Lll~~~~~~~l~~W~~FL~~~~~~~k~IskDtW~  161 (221)
T 4gba_A           82 RFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWN  161 (221)
T ss_dssp             HHHHHHHHTTSHHHHHHHHHHHHHHHSCTTTTCSSEEHHHHHHHHHHHTTTCCCTTHHHHHHHHHHCTTCCCEECHHHHH
T ss_pred             HHHHHHHHccCHHHHHHHHHHHHHHHhcCCccccCCCHHHHHHHHHHHcCCCCcHHHHHHHHHHHhcCCCCCCcCHHHHH
Confidence            9999999998888899999999999999  9999999999999999999984599999999999987  37999999999


Q ss_pred             HHHHHHHhhccccCCccccchhhHHH
Q 026176          209 QLLEFARVRQWTLHYQTMMQKAHGLI  234 (242)
Q Consensus       209 ~~l~F~~~~~~~l~~~de~~aWP~l~  234 (242)
                      |+|+|+++++.++++||+++|||+||
T Consensus       162 ~~l~F~~~i~~dls~YDe~gAWP~li  187 (221)
T 4gba_A          162 MFLNFTQVIGPDLSNYSEDEAWPSLF  187 (221)
T ss_dssp             HHHHHHHHSCSSCTTCCTTSCCCHHH
T ss_pred             HHHHHHHHhcccccCCCCCCCchHHH
Confidence            99999999999999999999999998

>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.6e-13  Score=98.53  Aligned_cols=50  Identities=24%  Similarity=0.450  Sum_probs=46.7

Q ss_pred             CCCCCcchHHHHHHHHhhhC-CCHHHHHHHHHhCCCCchhhhhhhccccCC
Q 026176            1 MHKLSRSNRDKLQQFVSITG-ASEKAALQALKASDWHLEGAFDVFYSQPQS   50 (242)
Q Consensus         1 m~~l~~~q~~~i~~F~~~T~-~s~~~A~~~L~~~~w~le~A~~~ff~~~~~   50 (242)
                      |++|+++++++|++|++||| +++.+|++||+.++|||+.||+.||+++..
T Consensus        11 ~~~Ls~~~~e~i~qF~~ITg~~d~~~A~~~Le~~~WnLe~Av~~ff~~~~~   61 (67)
T 2dam_A           11 ERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEG   61 (67)
T ss_dssp             CCCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHTSCHHHHHHHHHHSSCS
T ss_pred             hhhcChhHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence            56899999999999999999 899999999999999999999999988654

>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.37  E-value=4e-13  Score=94.99  Aligned_cols=48  Identities=35%  Similarity=0.405  Sum_probs=45.3

Q ss_pred             CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccccCC
Q 026176            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS   50 (242)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~~   50 (242)
                      .|++.++++|+||++|||+++++|++||+.++|||+.||+.||+++..
T Consensus        10 ~~s~~~~e~i~qF~~iTg~~~~~A~~~Le~~~WnLe~Av~~ff~~~~~   57 (62)
T 2dal_A           10 AASSALKGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGGS   57 (62)
T ss_dssp             SSCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTSCHHHHHHHHHHSCCC
T ss_pred             hcCccHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHcCCCC
Confidence            578899999999999999999999999999999999999999998754

>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3

Probab=99.35  E-value=6.2e-13  Score=88.04  Aligned_cols=43  Identities=35%  Similarity=0.618  Sum_probs=40.8

Q ss_pred             cchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         6 ~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ++++++|++|+++||+++.+|++||++++|||+.|++.||++|
T Consensus         3 ~~~~~~i~~F~~iTg~~~~~A~~~L~~~~wdle~Ai~~ff~~~   45 (46)
T 1v92_A            3 EERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG   45 (46)
T ss_dssp             THHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred             ccHHHHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence            5688999999999999999999999999999999999999875

>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}

Probab=99.26  E-value=2.8e-12  Score=85.15  Aligned_cols=42  Identities=24%  Similarity=0.383  Sum_probs=37.2

Q ss_pred             CcchHHHHHHHHhhhCCCH-HHHHHHHHhCCCCchhhhhhhcc
Q 026176            5 SRSNRDKLQQFVSITGASE-KAALQALKASDWHLEGAFDVFYS   46 (242)
Q Consensus         5 ~~~q~~~i~~F~~~T~~s~-~~A~~~L~~~~w~le~A~~~ff~   46 (242)
                      +.+++++|++|+++||+++ .+|++||++|||||+.|++.||-
T Consensus         2 ~~d~de~ia~F~~iTG~~d~~~A~~~Lea~nWDLe~Av~~f~~   44 (45)
T 3e21_A            2 SMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIP   44 (45)
T ss_dssp             -CCHHHHHHHHHHHHCCCCHHHHHHHHHHTTTCHHHHHTTC--
T ss_pred             cccHHHHHHHHHHHHCCCCHHHHHHHHHHcCCcHHHHHHHHcC
Confidence            3578999999999999995 99999999999999999999984

>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.4e-11  Score=88.18  Aligned_cols=43  Identities=28%  Similarity=0.531  Sum_probs=39.9

Q ss_pred             hH-HHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccccCC
Q 026176            8 NR-DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS   50 (242)
Q Consensus         8 q~-~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~~   50 (242)
                      ++ ++|++|++|||+++.+|++||+.++||||.|++.||+++..
T Consensus        16 ~~q~~i~qF~~iTg~~~~~A~~~Le~~~WdLe~Al~~ff~~~~~   59 (66)
T 2dzl_A           16 RHQVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETNI   59 (66)
T ss_dssp             HHHHHHHHHHHHHCCCHHHHHHHHHTTTTCHHHHHHHHHTCSCC
T ss_pred             ccHHHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHcCCCC
Confidence            44 78999999999999999999999999999999999998753

>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A

Probab=98.01  E-value=6.7e-06  Score=56.90  Aligned_cols=45  Identities=20%  Similarity=0.260  Sum_probs=42.5

Q ss_pred             CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccc
Q 026176            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (242)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (242)
                      +|++.|.++|.+|+..||.+.+-+..||+.++||++.|+..|-+.
T Consensus         1 ~l~~~q~~mv~~~s~~T~Mn~e~S~~cL~~n~Wd~~~A~~~F~~~   45 (57)
T 2jp7_A            1 RLNPVQLELLNKLHLETKLNAEYTFMLAEQSNWNYEVAIKGFQSS   45 (57)
T ss_dssp             CCCHHHHHHHHHHHHHHCSCHHHHHHHHHHTTTCSHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999764

>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3

Probab=97.95  E-value=8.5e-06  Score=56.70  Aligned_cols=45  Identities=20%  Similarity=0.377  Sum_probs=42.0

Q ss_pred             CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccc
Q 026176            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (242)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (242)
                      -||+.|.++|.+|+..||.+.+-+..||+.++||++.|+..|-+.
T Consensus         2 ~ls~~q~~mv~~~s~~Tgmn~~~s~~cL~~~~Wd~~~A~~~F~~l   46 (59)
T 1oai_A            2 TLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHL   46 (59)
T ss_dssp             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            378889999999999999999999999999999999999999763

>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A

Probab=97.72  E-value=1.3e-05  Score=73.26  Aligned_cols=41  Identities=41%  Similarity=0.698  Sum_probs=38.1

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccc
Q 026176            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (242)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (242)
                      ...+++++|.+||||++..|..||+.++|+|+.|++.||+.
T Consensus        44 ~~~~~~~~f~~~~~~~~~~~~~~l~~~~w~~~~~~~~~~~~   84 (362)
T 4gew_A           44 SDEQKLHEFAIITATDEAFAQSILQDVDWDLKKALDVFYGS   84 (362)
T ss_dssp             CHHHHHHHHHHHHTCCHHHHHHHTTSSSSCHHHHHHHHHHC
T ss_pred             chHHHHHHHHHHhCCcHHHHHHHHhhcCchHHHHHHHHcCC
Confidence            34678999999999999999999999999999999999954

>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1

Probab=97.65  E-value=5.7e-05  Score=47.62  Aligned_cols=39  Identities=31%  Similarity=0.319  Sum_probs=34.8

Q ss_pred             cchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhc
Q 026176            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (242)
Q Consensus         6 ~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (242)
                      ++..+.|++++++ |.++..|++.|+.++||++.|++-.|
T Consensus         2 ~~~~~~i~~L~~m-Gf~~~~a~~AL~~~~~n~e~A~~~L~   40 (40)
T 1z96_A            2 PGLNSKIAQLVSM-GFDPLEAAQALDAANGDLDVAASFLL   40 (40)
T ss_dssp             -CHHHHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHHHC
T ss_pred             chHHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHC
Confidence            4567899999999 99999999999999999999998654

>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1

Probab=97.40  E-value=0.00012  Score=56.39  Aligned_cols=42  Identities=21%  Similarity=0.381  Sum_probs=39.1

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      +.++.|+..+++||++++.|+..|..++||++.||+..++..
T Consensus        38 d~eekVk~L~EmtG~seeeAr~AL~~~ngDl~~AI~~Lleg~   79 (104)
T 1wj7_A           38 DFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGN   79 (104)
T ss_dssp             HHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred             cHHHHHHHHHHhhCCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            346789999999999999999999999999999999999775

>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}

Probab=96.78  E-value=0.002  Score=45.31  Aligned_cols=42  Identities=26%  Similarity=0.412  Sum_probs=38.4

Q ss_pred             CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhc
Q 026176            4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (242)
Q Consensus         4 l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (242)
                      ++-+.+..+.+|+.-||+.+-.|+.+|+-.|||+.+|++.|=
T Consensus        13 mt~dmdavls~fvrstgaepgLaRDlleGKnWDl~AAL~D~e   54 (73)
T 2l2d_A           13 MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALSDYE   54 (73)
T ss_dssp             SSCCHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHhcCCCcchhHHhhccCCccHhHHhhhHH
Confidence            445678889999999999999999999999999999999985

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=96.49  E-value=0.07  Score=39.90  Aligned_cols=67  Identities=9%  Similarity=0.143  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|..|-......|+.+-+.+++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus        10 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~   76 (147)
T 4ds7_A           10 IAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQ   76 (147)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHh
Confidence            4778888998865555699999999999999999988888888888888889999999999988653

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=96.47  E-value=0.1  Score=40.17  Aligned_cols=66  Identities=9%  Similarity=0.154  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...+.++|..|-.+....|+.+-+.+++..+|+.+....+-.+...+....-|.|+.+||+..+..
T Consensus        27 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   92 (169)
T 3qrx_A           27 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTA   92 (169)
T ss_dssp             HHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            477888898886544569999999999999999998888888888888888899999999999876

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=96.44  E-value=0.037  Score=41.70  Aligned_cols=140  Identities=7%  Similarity=0.086  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS  135 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~  135 (242)
                      .+.+.++|..+-.+....|..+-+.+++..+|+.+....+-.+...+....-|.|+.+||+..+............    
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~----   85 (153)
T 3ox6_A           10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMI----   85 (153)
T ss_dssp             HHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHH----
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccc----
Confidence            3677888888754345689999999999999999988888778888888888999999999998654322111000    


Q ss_pred             HHHHHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCC-CcccHHHHHHHHHhhcCCCCCHhhhHHH
Q 026176          136 FMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEK-QWPLVDHWCQFLQAKHNKAISRDTWSQL  210 (242)
Q Consensus       136 ~l~~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~-~~~~l~~W~~FL~~~~~k~IskD~W~~~  210 (242)
                             .    ..-.+.+|...=..+...|+.+.-..+.+-+++.+ .-..++..++-+.......||.+.+..+
T Consensus        86 -------~----~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~  150 (153)
T 3ox6_A           86 -------G----VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM  150 (153)
T ss_dssp             -------C----HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHH
T ss_pred             -------c----HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence                   0    01112233332223444566666666555544322 1123444554443344466776655443

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=96.38  E-value=0.11  Score=38.81  Aligned_cols=66  Identities=12%  Similarity=0.138  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhh---cccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM---KAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l---~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|..|-......|+.+-+.+++..+|+.|....+-.+...+   .... |.|+.++|+..+...
T Consensus         7 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~   75 (149)
T 2mys_C            7 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAA   75 (149)
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHH
Confidence            46788899988655556899999999999999999877777777777   7777 999999999999875

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=96.38  E-value=0.038  Score=43.26  Aligned_cols=69  Identities=12%  Similarity=0.089  Sum_probs=53.8

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcC-CCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLg-v~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ....+.+.++|..+-.+....|+.+-+.+.+..+| ..+..-.+-.+...+....-|.|+.+||+..+..
T Consensus         3 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~   72 (172)
T 2znd_A            3 LPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY   72 (172)
T ss_dssp             ---CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHH
T ss_pred             CcchhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            34568899999999544456899999999999999 5565555555666777888899999999998875

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=96.30  E-value=0.075  Score=42.74  Aligned_cols=67  Identities=13%  Similarity=-0.006  Sum_probs=56.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.+.++|+.+-.+....|+.+-+.+.+..+|..+..-.+-.+...+....-|.|+.+||+..+..
T Consensus        25 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~   91 (191)
T 1y1x_A           25 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF   91 (191)
T ss_dssp             TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            4688999999995444568999999999988888887766667777788888899999999998875

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=96.28  E-value=0.061  Score=40.98  Aligned_cols=82  Identities=9%  Similarity=0.087  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc--CCCCHHHHHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL--GIDSLDKFRER  133 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l--~~dsi~~lk~~  133 (242)
                      ...+.++|..|-.+....|+.+-+.+++..+|+.+....+-.+...+....-|.|+.+||+..+...  .....+.++..
T Consensus        22 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~  101 (161)
T 3fwb_A           22 KQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRA  101 (161)
T ss_dssp             HHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHH
Confidence            4678888888854445699999999999999999988888888888888888999999999998753  22334444444


Q ss_pred             HHHH
Q 026176          134 ISFM  137 (242)
Q Consensus       134 l~~l  137 (242)
                      ...+
T Consensus       102 F~~~  105 (161)
T 3fwb_A          102 FQLF  105 (161)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4333

>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1

Probab=96.22  E-value=0.0044  Score=39.65  Aligned_cols=39  Identities=23%  Similarity=0.467  Sum_probs=34.8

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccc
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (242)
                      ..+.|++.+++ |-+++.|++.|++++||++.|++--|++
T Consensus         4 ~e~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~L~~~   42 (43)
T 2g3q_A            4 KSLAVEELSGM-GFTEEEAHNALEKCNWDLEAATNFLLDS   42 (43)
T ss_dssp             HHHHHHHHHTT-TSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCcCHHHHHHHHHcC
Confidence            45789999997 9999999999999999999999877653

>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=96.20  E-value=0.0052  Score=40.71  Aligned_cols=41  Identities=20%  Similarity=0.246  Sum_probs=36.4

Q ss_pred             cchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccc
Q 026176            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (242)
Q Consensus         6 ~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (242)
                      +...++|++.+++ |-++..|+..|++++||++.|++--|++
T Consensus         6 ~~~~~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~e~L~~g   46 (49)
T 1ify_A            6 SEYETMLTEIMSM-GYERERVVAALRASYNNPHRAVEYLLTG   46 (49)
T ss_dssp             HHHHHHHHHHHHT-TCCHHHHHHHHHTTTSCSHHHHHHHHHC
T ss_pred             ccCHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence            3456789999999 8999999999999999999999987764

>1dv0_A DNA repair protein HHR23A; helical bundle, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 1f4i_A

Probab=96.18  E-value=0.0017  Score=42.80  Aligned_cols=43  Identities=19%  Similarity=0.261  Sum_probs=38.1

Q ss_pred             CcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            5 SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         5 ~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      |++.+++|++.+++ |.++..|++.|.+++||.+.|++-.|+++
T Consensus         1 ~~~e~eaI~rL~~m-GF~~~~a~~Al~a~~~n~e~A~~~Lf~~~   43 (47)
T 1dv0_A            1 GSQEKEAIERLKAL-GFPESLVIQAYFACEKNENLAANFLLSQN   43 (47)
T ss_dssp             --CCHHHHTTTTTT-TCCHHHHHHHHTTTTSCHHHHHHHTTSCC
T ss_pred             CcchHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCc
Confidence            45678899999998 99999999999999999999999999764

>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A

Probab=96.15  E-value=0.00085  Score=58.81  Aligned_cols=45  Identities=20%  Similarity=0.372  Sum_probs=0.0

Q ss_pred             CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         4 l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ++..|+++|.+|+..||.+.+-+..||+.++||++.|+..|-+..
T Consensus       194 ~~~~q~~~v~~~~~~T~mn~~~s~~cL~~~~Wd~~~A~~~F~~l~  238 (250)
T 1jkg_B          194 LSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLK  238 (250)
T ss_dssp             ---------------------------------------------
T ss_pred             CCHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            456777899999999999999999999999999999999996654

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=96.13  E-value=0.0091  Score=39.93  Aligned_cols=68  Identities=12%  Similarity=0.048  Sum_probs=55.8

Q ss_pred             CCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .....+.++|..|-......|..+-+.+.+..+|..+.+-.+-.+...+....-|.|+.+||+..|..
T Consensus         3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   70 (71)
T 2b1u_A            3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ   70 (71)
T ss_dssp             TTHHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred             ccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            45678999999885444468999999999999999887777666777777778899999999988754

>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=96.01  E-value=0.007  Score=43.62  Aligned_cols=44  Identities=25%  Similarity=0.343  Sum_probs=39.0

Q ss_pred             CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         4 l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      .++..++.|++.+++ |-+++.|+..|++++||++.|++-.|.+.
T Consensus        25 ~~~~~ee~I~~L~eM-GF~r~~a~~AL~~~~~nve~Ave~Ll~~~   68 (73)
T 1vg5_A           25 RVAASEEQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMSQS   68 (73)
T ss_dssp             CSCCCHHHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred             CCcccHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            345568899999997 89999999999999999999999988764

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=95.85  E-value=0.026  Score=37.10  Aligned_cols=64  Identities=6%  Similarity=0.078  Sum_probs=53.2

Q ss_pred             HHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .+.++|..|-......|+.+-+.+.+..+|..+.+-.+-.+...+....-|.|+.+||+..+.+
T Consensus         2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            4678899886544568999999999999999887777667777778888899999999998865

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=95.85  E-value=0.14  Score=39.01  Aligned_cols=140  Identities=7%  Similarity=0.025  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS  135 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~  135 (242)
                      ...+.++|..|-......|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+.......  .      
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~--~------   90 (162)
T 1top_A           19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED--A------   90 (162)
T ss_dssp             HHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH--H------
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc--c------
Confidence            46778888887544456899999999999999999877777777788888889999999999886632100  0      


Q ss_pred             HHHHHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhhcCCCCCHhhhHHHH
Q 026176          136 FMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLL  211 (242)
Q Consensus       136 ~l~~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~~~k~IskD~W~~~l  211 (242)
                              ........+.+|...=..+.-.|+.+.-..+.+-+-..-.-..++..+.-+.......||.+.+..++
T Consensus        91 --------~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  158 (162)
T 1top_A           91 --------KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM  158 (162)
T ss_dssp             --------HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             --------ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence                    00011222233333322334456666555554432111101234444544444444667777665443

>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B

Probab=95.84  E-value=0.0092  Score=40.00  Aligned_cols=39  Identities=26%  Similarity=0.416  Sum_probs=35.1

Q ss_pred             HHHHHHHHhhhCC-CHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         9 ~~~i~~F~~~T~~-s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      .+.|++.+++ |- ++..|++.|++++||++.|++--|.+|
T Consensus        13 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gn~e~A~e~L~~~~   52 (52)
T 2jy5_A           13 QQQLEQLSAM-GFLNREANLQALIATGGDINAAIERLLGSS   52 (52)
T ss_dssp             HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHTTCC
T ss_pred             HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhCc
Confidence            5789999998 77 899999999999999999999888764

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=95.81  E-value=0.085  Score=43.87  Aligned_cols=67  Identities=6%  Similarity=-0.042  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|+.+-.+....|+.+-+.+.+..+|..+.+-.+-.+...+....-|.|+.+||+..+..+
T Consensus        50 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~  116 (220)
T 3sjs_A           50 YTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM  116 (220)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence            4678888998865555699999999999999999988777777888888889999999999998873

>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1

Probab=95.76  E-value=0.011  Score=43.69  Aligned_cols=40  Identities=18%  Similarity=0.193  Sum_probs=37.0

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ..++|++.+++ |-++..|+..|++++||++.|++-.|.++
T Consensus        29 ~ee~I~~Lv~M-GF~~~~A~~AL~~t~gdve~A~e~L~sh~   68 (83)
T 1veg_A           29 SQESINQLVYM-GFDTVVAEAALRVFGGNVQLAAQTLAHHG   68 (83)
T ss_dssp             CHHHHHHHHHH-SCCHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            46889999998 99999999999999999999999999864

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=95.76  E-value=0.082  Score=39.56  Aligned_cols=66  Identities=11%  Similarity=0.158  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...+.++|..|-......|+.+-+.+++..+|+.+....+-.+...+....-|.|+.+||+..+..
T Consensus         5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~   70 (142)
T 2bl0_C            5 VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGR   70 (142)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHH
Confidence            467889999996544568999999999999999998877777777888888899999999999886

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=95.71  E-value=0.31  Score=37.91  Aligned_cols=68  Identities=10%  Similarity=0.115  Sum_probs=57.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ....+.++|..+-.+....|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus         9 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~   76 (179)
T 2f2o_A            9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK   76 (179)
T ss_dssp             HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHH
Confidence            35788899999865545689999999999999999988777777788888888999999999988653

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=95.62  E-value=0.092  Score=40.05  Aligned_cols=67  Identities=7%  Similarity=-0.004  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHhcCCC-CCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~-~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|..|-... ...|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus        17 ~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~   84 (161)
T 1dtl_A           17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS   84 (161)
T ss_dssp             HHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence            467888999886555 5689999999999999999987777777778888888999999999998775

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=95.62  E-value=0.059  Score=37.98  Aligned_cols=66  Identities=8%  Similarity=0.046  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...+.++|..|-......|+.+-+...+..+|+.+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~   84 (90)
T 1avs_A           19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (90)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            467888999995444569999999999999999987777667777777778899999999998875

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=95.56  E-value=0.036  Score=37.40  Aligned_cols=68  Identities=10%  Similarity=0.075  Sum_probs=52.9

Q ss_pred             CHHHHHHHHHHhcCC-CC-CccChHHHHHHHHHcCCCC--CchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           55 DTRHLEELYNRYKDP-YL-DMILVDGITLLCNDLQVDP--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~-~~-d~I~~dG~~~~~~DLgv~~--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ....+.++|..|.|. .. ..|+.+-+.+.+..+|..+  .+-.+-.+...+....-|.|+.+||+..+..+
T Consensus         3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~   74 (76)
T 1qx2_A            3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            357899999999333 34 6899999999999999776  55445555566677778999999999988764

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=95.51  E-value=0.12  Score=39.31  Aligned_cols=68  Identities=9%  Similarity=0.024  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHhc-CCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           56 TRHLEELYNRYK-DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        56 ~~~l~~lFd~Y~-d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ...+.++|..|- ......|+.+-+.+.+..+|+.+....+-.+...+....-|.|+.+||+..+....
T Consensus        12 ~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~   80 (158)
T 2jnf_A           12 VKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFL   80 (158)
T ss_dssp             HHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence            467888999887 55556999999999999999999877777777788888889999999999998754

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=95.48  E-value=0.47  Score=35.86  Aligned_cols=66  Identities=9%  Similarity=0.169  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...|.++|+.|-......|..+-+...+..+|..|....+--+...+....-|.|+.+||+..|..
T Consensus         5 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   70 (143)
T 2obh_A            5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQ   70 (143)
T ss_dssp             HHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHH
Confidence            467888999886544568999999999999999998777777777777788899999999998754

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=95.45  E-value=0.097  Score=36.80  Aligned_cols=70  Identities=10%  Similarity=0.059  Sum_probs=57.8

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (242)
                      ....+.++|..|-......|..+-+.+.+..+|..+.+-.+-.+...+....-|.|+.+||+..+.....
T Consensus         7 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~   76 (92)
T 2kn2_A            7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRG   76 (92)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccC
Confidence            3578899999996444568999999999999999887766666777777788899999999999987654

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=95.44  E-value=0.36  Score=37.09  Aligned_cols=70  Identities=9%  Similarity=0.117  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHH----HHHHcCCCCCchHHH-----------HHHHhhcccccccccHHHHHHHhH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITL----LCNDLQVDPQDIVML-----------VVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~----~~~DLgv~~ed~~~L-----------vLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      .+.+.++|+.|-.+....|+.+-+.+    ++..+|+.|.+..+-           .+...+....-|.|+.+||+..+.
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~   85 (176)
T 1nya_A            6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTE   85 (176)
T ss_dssp             HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            47889999999544456899999988    789999999776654           455566777789999999999998


Q ss_pred             HcCCC
Q 026176          121 SLGID  125 (242)
Q Consensus       121 ~l~~d  125 (242)
                      .....
T Consensus        86 ~~~~~   90 (176)
T 1nya_A           86 NLIFE   90 (176)
T ss_dssp             HHHSS
T ss_pred             HHhcC
Confidence            86443

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=95.42  E-value=0.12  Score=38.53  Aligned_cols=80  Identities=8%  Similarity=0.126  Sum_probs=57.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC---CCCHHHHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG---IDSLDKFR  131 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~---~dsi~~lk  131 (242)
                      ++..+.++|..|-......|+.+-+.+++..+|+.+....+-.+...   ..-|.|+.+||+..+....   ......++
T Consensus         3 s~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~   79 (145)
T 2bl0_B            3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEML   79 (145)
T ss_dssp             CHHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHH
T ss_pred             CHHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHH
Confidence            45569999999964445689999999999999999876555444443   6678999999999987753   12334444


Q ss_pred             HHHHHH
Q 026176          132 ERISFM  137 (242)
Q Consensus       132 ~~l~~l  137 (242)
                      .....+
T Consensus        80 ~~F~~~   85 (145)
T 2bl0_B           80 DAFRAL   85 (145)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            444443

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=95.41  E-value=0.16  Score=39.76  Aligned_cols=65  Identities=11%  Similarity=-0.016  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHc-C-------CCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-Q-------VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL-g-------v~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .+.+.++|..+- .....|+.+-+.+.+..+ |       ..+..-.+-.+...+....-|.|+.+||+..+..
T Consensus         3 ~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~   75 (173)
T 1alv_A            3 VRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN   75 (173)
T ss_dssp             HHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH
Confidence            367889999996 445689999999999998 7       5555555555666777888899999999999885

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=95.36  E-value=0.045  Score=37.09  Aligned_cols=66  Identities=9%  Similarity=0.112  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...+.++|..|-......|..+-+.+.+..+|+.+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A            6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            467888999995444568999999999999999987766666777778788899999999998764

>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}

Probab=95.35  E-value=0.015  Score=39.06  Aligned_cols=39  Identities=28%  Similarity=0.410  Sum_probs=34.7

Q ss_pred             HHHHHHHHhhhCC-CHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         9 ~~~i~~F~~~T~~-s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      .++|++.+++ |- ++..|++.|++++||++.|++--|.++
T Consensus        12 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gnve~Ave~L~~~~   51 (53)
T 2knz_A           12 QQQLEQLNSM-GFINREANLQALIATGGDINAAIERLLGSQ   51 (53)
T ss_dssp             HHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHCC
T ss_pred             HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHHcC
Confidence            4679999998 56 899999999999999999999988764

>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=95.29  E-value=0.013  Score=39.69  Aligned_cols=40  Identities=28%  Similarity=0.331  Sum_probs=34.9

Q ss_pred             HHHHHHHHhhhCCCH-HHHHHHHHhCCCCchhhhhhhccccC
Q 026176            9 RDKLQQFVSITGASE-KAALQALKASDWHLEGAFDVFYSQPQ   49 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~-~~A~~~L~~~~w~le~A~~~ff~~~~   49 (242)
                      .+.|++.+++ |.++ ..+++.|++++||++.|++.-|..+.
T Consensus        10 ~~~l~~L~~M-GF~d~~~n~~AL~~~~Gdv~~Ave~L~~~~~   50 (54)
T 2dah_A           10 QVQLEQLRSM-GFLNREANLQALIATGGDVDAAVEKLRQSSG   50 (54)
T ss_dssp             HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            6789999999 8865 45699999999999999999998764

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=95.21  E-value=0.13  Score=36.95  Aligned_cols=67  Identities=9%  Similarity=0.035  Sum_probs=55.5

Q ss_pred             CCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      .....+.++|..|-......|..+-+.+.+..+|..+.+-.+--+...+....-|.|+.+||+..|.
T Consensus        26 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~   92 (94)
T 2kz2_A           26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT   92 (94)
T ss_dssp             SCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            3568899999999544456899999999999999988776666666677777889999999998775

>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=95.16  E-value=0.023  Score=39.61  Aligned_cols=40  Identities=28%  Similarity=0.419  Sum_probs=36.2

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ..++|++.+++ |-++..|++.|++++||++.|++--|++.
T Consensus         9 ~~~~I~~L~~M-GF~~~~a~~AL~~~~~nve~A~e~L~~~~   48 (63)
T 1wji_A            9 DEKALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTSN   48 (63)
T ss_dssp             CHHHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            46789999996 99999999999999999999999988764

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=95.13  E-value=0.59  Score=37.41  Aligned_cols=100  Identities=10%  Similarity=0.114  Sum_probs=71.6

Q ss_pred             CHHHHHHHHHHhcCC-CCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC-CCHHHHHH
Q 026176           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI-DSLDKFRE  132 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~-dsi~~lk~  132 (242)
                      +.+.+.++|+.|-.. ....|+.+-+.+++..+|..+....+-.+...+....-|.|+.+||+..+..++. .+.+.++.
T Consensus        20 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~   99 (204)
T 1jba_A           20 DAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKW   99 (204)
T ss_dssp             HHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHH
T ss_pred             CHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHH
Confidence            568899999999755 4568999999999999999666555556667778888899999999999998764 34455665


Q ss_pred             HHHHHHHHc---cchHHHHHHHHHH
Q 026176          133 RISFMRAEL---KDEQKFREIYNFA  154 (242)
Q Consensus       133 ~l~~l~~~l---~~~~~Fk~~Y~f~  154 (242)
                      ....++..=   -+..+|+.+..-.
T Consensus       100 ~F~~~D~d~~G~I~~~E~~~~l~~~  124 (204)
T 1jba_A          100 TFKIYDKDRNGCIDRQELLDIVESI  124 (204)
T ss_dssp             HHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            555543221   1233455555444

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=95.10  E-value=0.16  Score=35.11  Aligned_cols=66  Identities=11%  Similarity=-0.031  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|..|-......|+.+-+.+.+..+| .+.+-.+-.+...+....-|.|+.+||+..+...
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   75 (86)
T 2opo_A           10 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   75 (86)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence            47788999999544456999999999999999 7776666667777777888999999999999875

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=95.08  E-value=0.63  Score=37.29  Aligned_cols=78  Identities=9%  Similarity=-0.039  Sum_probs=59.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRER  133 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~  133 (242)
                      ....+.++|+.|-.+....|+.+-+.+.+..+|+.+. ..+-.+...+....-|.|+.+||+..+......+.+.++..
T Consensus        50 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l~~~  127 (191)
T 3k21_A           50 DVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCA  127 (191)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHHHHH
Confidence            4578899999996544569999999999999999987 55556666777788899999999998855443344444433

>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=95.06  E-value=0.027  Score=41.62  Aligned_cols=39  Identities=21%  Similarity=0.383  Sum_probs=36.0

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      .++|++++++ |.++..|++.|..++||++.|++-.|+++
T Consensus        22 ~~~I~qL~~M-GF~~~~a~~AL~~~n~n~e~A~ewL~~h~   60 (85)
T 2dkl_A           22 SRLIKQLTDM-GFPREPAEEALKSNNMNLDQAMSALLEKK   60 (85)
T ss_dssp             HHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHTTS
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHHCc
Confidence            5779999997 99999999999999999999999998764

>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.02  E-value=0.023  Score=39.42  Aligned_cols=40  Identities=38%  Similarity=0.475  Sum_probs=36.3

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ..+.|++.+++ |-+++.|++.|++++||++.|++-.|+++
T Consensus         9 ~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~A~e~L~~~~   48 (63)
T 2dak_A            9 PEDCVTTIVSM-GFSRDQALKALRATNNSLERAVDWIFSHI   48 (63)
T ss_dssp             CHHHHHHHHHH-TCCHHHHHHHHHHTTSCSHHHHHHHHHHH
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            46789999997 99999999999999999999999988764

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=94.88  E-value=0.092  Score=36.09  Aligned_cols=68  Identities=12%  Similarity=0.077  Sum_probs=49.2

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcC--CCC--CchHHHH--HHHhhcccccccccHHHHHHHhHHc
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ--VDP--QDIVMLV--VSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLg--v~~--ed~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ....+.++|..|-......|+.+-+...+..+|  ..+  +.+..++  +...+....-|.|+.+||+..+..+
T Consensus         5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~   78 (83)
T 1yx7_A            5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAEL   78 (83)
T ss_dssp             SCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHH
Confidence            456899999999654456899999999999999  544  4443311  3334455667999999999776653

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=94.88  E-value=0.22  Score=38.17  Aligned_cols=67  Identities=13%  Similarity=0.135  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|..|-......|+.+-+...+..+|..+....+-.+...+....-|.|+.+||+..+..+
T Consensus        26 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~   92 (166)
T 2aao_A           26 IAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHL   92 (166)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence            4678889999965555689999999999999999987777777778888888999999999988653

>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=94.86  E-value=0.023  Score=39.63  Aligned_cols=46  Identities=26%  Similarity=0.403  Sum_probs=41.6

Q ss_pred             CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccccC
Q 026176            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (242)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (242)
                      .|++++.+.|...+++ |-+++.|++.|++.+.|+|+|++=-|.++.
T Consensus        14 ~ls~se~e~V~~LvsM-GFs~~qA~kALKat~~NvErAaDWLFSH~D   59 (63)
T 1wgn_A           14 MLSPSERQCVETVVNM-GYSYECVLRAMKKKGENIEQILDYLFAHSG   59 (63)
T ss_dssp             TCCHHHHHHHHHHHHH-HCCHHHHHHHHHHHCSCHHHHHHHHHHHSC
T ss_pred             hhCcchHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            4788899999999875 799999999999999999999999998864

>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=94.84  E-value=0.031  Score=40.05  Aligned_cols=41  Identities=29%  Similarity=0.406  Sum_probs=37.0

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccccC
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (242)
                      ..++|++.+++ |-++..|++.|++++||++.|++-.|+++.
T Consensus        29 ~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~Ave~L~~~~~   69 (73)
T 1wiv_A           29 DQSSVDTLLSF-GFAEDVARKALKASGGDIEKATDWVFNNSG   69 (73)
T ss_dssp             CHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHSCC
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence            46789999998 999999999999999999999999887753

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=94.83  E-value=0.11  Score=38.41  Aligned_cols=64  Identities=13%  Similarity=0.161  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHh
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (242)
                      ...|.+.|+.|=.+....|+.+-+.+.+..||+.+.+-.+-.+...+....-|.|+-+||++-|
T Consensus        35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            4678899999955455699999999999999999977777777778888888999999999855

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=94.80  E-value=0.93  Score=34.14  Aligned_cols=66  Identities=11%  Similarity=0.121  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .+.+.+.|..|-......|+.+-+...+..+|..|....+-.+...+....-|.|+.+||+..+..
T Consensus         9 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~   74 (148)
T 1exr_A            9 IAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMAR   74 (148)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHh
Confidence            356788898886544568999999999999999998877777777778888899999999998764

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=94.80  E-value=0.58  Score=37.55  Aligned_cols=145  Identities=8%  Similarity=0.114  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCC--CCCchHHHHHH-------HhhcccccccccHHHHHHHhHHcCCCC
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV--DPQDIVMLVVS-------WHMKAATMCEFSKQEFIGGLQSLGIDS  126 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv--~~ed~~~LvLa-------~~l~a~~~g~~tr~eF~~g~~~l~~ds  126 (242)
                      ...+.++|+.+-......|+.+-+...+..+|.  .|.+..+-.+.       ..+....-|.|+.+||+..|..     
T Consensus        35 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~-----  109 (208)
T 2hpk_A           35 LSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRV-----  109 (208)
T ss_dssp             -CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHH-----
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH-----
Confidence            468899999996544569999999999999998  77655555554       6677777899999999999862     


Q ss_pred             HHHHHHHHHHHHHHc-cchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhhcCCCCCHh
Q 026176          127 LDKFRERISFMRAEL-KDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRD  205 (242)
Q Consensus       127 i~~lk~~l~~l~~~l-~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~~~k~IskD  205 (242)
                      ..++...     ..+ ..+...+++.+.+|...=..|.-.|+.+.-..+.+.+ +.. -..++..+.-+...+...|+.+
T Consensus       110 ~~~~~~~-----~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~-g~~-~~~~~~~~~~~D~d~dG~I~~~  182 (208)
T 2hpk_A          110 FAEAERE-----RERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAF-DVP-QEAAYTFFEKADTDKSGKLERT  182 (208)
T ss_dssp             HHHHHHH-----HHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-TSC-TTHHHHHHHHHCTTCCSSBCHH
T ss_pred             Hhhhhhh-----hhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-CcC-HHHHHHHHHHhCCCCCCcCcHH
Confidence            0000000     011 1111223333444444322344456666655555443 111 1345555555544555778888


Q ss_pred             hhHHHHH
Q 026176          206 TWSQLLE  212 (242)
Q Consensus       206 ~W~~~l~  212 (242)
                      .+..++.
T Consensus       183 EF~~~~~  189 (208)
T 2hpk_A          183 ELVHLFR  189 (208)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7766553

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=94.74  E-value=0.38  Score=37.97  Aligned_cols=80  Identities=9%  Similarity=0.080  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS  135 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~  135 (242)
                      ...+.++|..+-.+....|+.+-+.+.+..+|++++.  +-.+...+....-|.|+.+||+..+......+-+.++....
T Consensus        38 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~--~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~  115 (180)
T 3mse_B           38 IKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWD--INRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKAAFN  115 (180)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHH--HHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCHHH--HHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHH
Confidence            4788999999965445699999999999999998643  33444556677789999999999887654433334444443


Q ss_pred             HH
Q 026176          136 FM  137 (242)
Q Consensus       136 ~l  137 (242)
                      .+
T Consensus       116 ~~  117 (180)
T 3mse_B          116 KI  117 (180)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=94.71  E-value=0.06  Score=36.98  Aligned_cols=69  Identities=9%  Similarity=0.028  Sum_probs=55.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcC-CCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLg-v~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (242)
                      ....+. +|..|-......|+.+-+.+.+..+| ..+.+-.+-.+...+....-|.|+.+||+..+....+
T Consensus         7 ~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~   76 (81)
T 1c7v_A            7 EEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSKN   76 (81)
T ss_dssp             CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC--
T ss_pred             HHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhh
Confidence            467889 99999544445899999999999999 8877766666777778888899999999999877543

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=94.66  E-value=0.1  Score=35.54  Aligned_cols=65  Identities=12%  Similarity=0.054  Sum_probs=53.0

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..+.++|..|-......|+.+-+.+.+..+| .+.+-.+-.+...+....-|.|+.+||+..+...
T Consensus         3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A            3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            5788999999654456899999999999999 7666666666667777788999999999988774

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=94.65  E-value=0.29  Score=37.51  Aligned_cols=121  Identities=10%  Similarity=0.101  Sum_probs=78.7

Q ss_pred             CCCCCcchHHHHHH-HHhh-hC----CCHHHHHHHHHhCCCCchhh-hhhhcc----cc---------------CCCCcC
Q 026176            1 MHKLSRSNRDKLQQ-FVSI-TG----ASEKAALQALKASDWHLEGA-FDVFYS----QP---------------QSKSLT   54 (242)
Q Consensus         1 m~~l~~~q~~~i~~-F~~~-T~----~s~~~A~~~L~~~~w~le~A-~~~ff~----~~---------------~~~~~~   54 (242)
                      |+.||..|.+.+++ |..+ ++    .|...-..+|+..+.++..+ +...+.    +.               ......
T Consensus         1 Ms~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   80 (148)
T 2lmt_A            1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETD   80 (148)
T ss_dssp             CCSCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTT
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccC
Confidence            77889888777653 5444 11    13455566777766654432 222221    11               111233


Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ....|.+.|..|=.+....|+.+-+.+.+..+|..+.+..+-.+...+....=|.|+.+||++-|++
T Consensus        81 ~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~  147 (148)
T 2lmt_A           81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ  147 (148)
T ss_dssp             THHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            4567888888885444568999999999999998887766666666777777789999999887653

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=94.59  E-value=0.15  Score=35.34  Aligned_cols=66  Identities=6%  Similarity=0.001  Sum_probs=53.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchH---HHHHHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIV---MLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~---~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ....+.++|..|-......|+.+-+.+.+..+|..+....   +-.+...+....-|.|+. ||+..+..
T Consensus        12 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~   80 (86)
T 1j7q_A           12 EKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK   80 (86)
T ss_dssp             HHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence            3577889999996544568999999999999999987766   555555666666799999 99998865

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=94.58  E-value=1.1  Score=33.87  Aligned_cols=68  Identities=9%  Similarity=0.038  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHH----HHHcCCCCCchHHHHH-----------HHhhcccccccccHHHHHHHhH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLL----CNDLQVDPQDIVMLVV-----------SWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~----~~DLgv~~ed~~~LvL-----------a~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      .+.+.++|+.+-.+....|+.+-+...    +..+|+.|.+..+-.+           ...+....-|.|+.+||+..+.
T Consensus         3 ~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~   82 (166)
T 3akb_A            3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAV   82 (166)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHH
T ss_pred             HHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            367899999995444568999888885    5677999876554433           3566777789999999999887


Q ss_pred             HcC
Q 026176          121 SLG  123 (242)
Q Consensus       121 ~l~  123 (242)
                      ...
T Consensus        83 ~~~   85 (166)
T 3akb_A           83 KRL   85 (166)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            753

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=94.54  E-value=0.3  Score=36.35  Aligned_cols=65  Identities=12%  Similarity=0.112  Sum_probs=51.2

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..+.+.++|..|-......|+.+-+.+.+..+|+.|....+-.+.   . ..-|.|+.+||+..+....
T Consensus         3 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~-~~~g~i~~~eF~~~~~~~~   67 (140)
T 1ggw_A            3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIE---S-TLPAEVDMEQFLQVLNRPN   67 (140)
T ss_dssp             CCTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHH---T-TSCSSEEHHHHHHHHCTTS
T ss_pred             hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHH---h-CCCCcCcHHHHHHHHHHHh
Confidence            446788999998655556999999999999999998765544333   2 6678999999999988764

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=94.48  E-value=0.85  Score=35.74  Aligned_cols=143  Identities=13%  Similarity=0.151  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHH-----HHHHHcCCCCCch-----HHHHHHHhhcccccccccHHHHHHHhHHcCCC
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGIT-----LLCNDLQVDPQDI-----VMLVVSWHMKAATMCEFSKQEFIGGLQSLGID  125 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~-----~~~~DLgv~~ed~-----~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d  125 (242)
                      .+.+.++|+.+-......|+.+-+.     ..+..+|+.|.+.     .+-.+...+....-|.|+.+||+..+..+...
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~   98 (195)
T 1qv0_A           19 IKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATS   98 (195)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHHHhh
Confidence            4778889999854445689999998     7889999998665     34445556677778999999999988763210


Q ss_pred             CHHHHHHHHHHHHHHccch-HHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCC-CcccHHHHHHHHHhhcCCCCC
Q 026176          126 SLDKFRERISFMRAELKDE-QKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEK-QWPLVDHWCQFLQAKHNKAIS  203 (242)
Q Consensus       126 si~~lk~~l~~l~~~l~~~-~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~-~~~~l~~W~~FL~~~~~k~Is  203 (242)
                             ....+   ..+. ...+...+.+|...=..|.-.|+.+.-..+.+.+ +.+ .-..++..++-+...+...|+
T Consensus        99 -------~~~~~---~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-g~~~~~~~~~~~~~~~D~d~dg~i~  167 (195)
T 1qv0_A           99 -------ELKKW---ARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKIS-GISPSQEDCEATFRHCDLDNAGDLD  167 (195)
T ss_dssp             -------HHHHH---HTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHH-SSCCCHHHHHHHHHHSCCCTTSCEE
T ss_pred             -------hhhcc---cccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcCC
Confidence                   00000   0111 1233333345554433344556666666655544 221 012244444444334446788


Q ss_pred             HhhhHH
Q 026176          204 RDTWSQ  209 (242)
Q Consensus       204 kD~W~~  209 (242)
                      .+.+..
T Consensus       168 ~~eF~~  173 (195)
T 1qv0_A          168 VDEMTR  173 (195)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887643

>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2

Probab=94.39  E-value=0.035  Score=38.97  Aligned_cols=37  Identities=22%  Similarity=0.088  Sum_probs=34.0

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhc
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (242)
                      .+.|.+.++.||++-..|+..|..+++|++.|+.--=
T Consensus        10 ~~~Vk~LRe~TGag~~dcKkAL~e~~GDi~~Ai~~Lr   46 (64)
T 2cp9_A           10 KELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLH   46 (64)
T ss_dssp             CHHHHHHHHHHCCCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            4679999999999999999999999999999998653

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=94.36  E-value=1.2  Score=33.34  Aligned_cols=130  Identities=12%  Similarity=0.185  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC--CCHHHHHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI--DSLDKFRER  133 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~--dsi~~lk~~  133 (242)
                      ...+.++|..+-.+....|+.+-+ +.+..+|.+|   .+-.+...+....-|.|+.+||+..+.....  .+.+.++..
T Consensus         5 ~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~   80 (155)
T 3ll8_B            5 IKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA   80 (155)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHH
Confidence            367888898885444568999999 7778888877   3344555667777899999999999988654  334566666


Q ss_pred             HHHHHHHc---cchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhc----CCC-CcccHHHHHHHHHh
Q 026176          134 ISFMRAEL---KDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLF----AEK-QWPLVDHWCQFLQA  196 (242)
Q Consensus       134 l~~l~~~l---~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll----~~~-~~~~l~~W~~FL~~  196 (242)
                      ...+...=   -+..+|+.+.+-..       ...++.+.+.++.+.+|    ..+ +.=-++.|+.++..
T Consensus        81 F~~~D~d~~G~i~~~e~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  144 (155)
T 3ll8_B           81 FRIYDMDKDGYISNGELFQVLKMMV-------GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG  144 (155)
T ss_dssp             HHHHCTTCSSCBCHHHHHHHHHHHH-------GGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGG
T ss_pred             HHHhCCCCCCcCcHHHHHHHHHHHh-------ccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            65554321   23445666554321       12355566666666532    111 12235666666643

>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.30  E-value=0.053  Score=35.22  Aligned_cols=39  Identities=28%  Similarity=0.534  Sum_probs=34.7

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ..+.|++.+++ |-+++.|++.|.+++ |++.|++-.+++|
T Consensus         9 ~~~~v~~L~~M-GF~~~~a~~AL~~~~-n~e~A~~~L~~h~   47 (47)
T 2ekk_A            9 NQQQLQQLMDM-GFTREHAMEALLNTS-TMEQATEYLLTHP   47 (47)
T ss_dssp             CHHHHHHHHHH-HCCHHHHHHHHHHSC-SHHHHHHHHHTCC
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcC-CHHHHHHHHHcCC
Confidence            46789999996 999999999999998 9999999887764

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=94.29  E-value=0.48  Score=34.08  Aligned_cols=67  Identities=9%  Similarity=0.059  Sum_probs=51.0

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL---gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ....+.++|..|-.+....|+.+-+.+.+..+   |..+.+-.+--+...+....-|.|+.+||+.-|++
T Consensus        39 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           39 TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            56788888988854445689999998888888   87776665555556666677789999999887765

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=94.29  E-value=0.35  Score=39.85  Aligned_cols=69  Identities=10%  Similarity=0.021  Sum_probs=52.9

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCc------hHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD------IVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed------~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ....+.|.++|+.|-......|+.+-+.+.+..+|+.|..      ..+--+...+....-|.|+.+||+..+..
T Consensus        12 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~   86 (263)
T 2f33_A           12 LITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPT   86 (263)
T ss_dssp             CCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTS
T ss_pred             cccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            4467889999999965445689999999999999877643      33444555667777899999999988753

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=94.21  E-value=1.3  Score=33.76  Aligned_cols=78  Identities=8%  Similarity=-0.001  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCC-CCCchHHHHHHHhhcccccccccHHHHHHHhHHcC--CCCHHHHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRE  132 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv-~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~--~dsi~~lk~  132 (242)
                      ...|.++|..|-......|+.+-+...+..+|+ .+..-.+-.+....    -|.|+.+||+..+....  .++.+.++.
T Consensus        24 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~~~~~l~~   99 (166)
T 2mys_B           24 IEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDVIMG   99 (166)
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCCcHHHHHH
Confidence            467888999886544568999999999999999 88654443333322    58999999999988652  234455555


Q ss_pred             HHHHH
Q 026176          133 RISFM  137 (242)
Q Consensus       133 ~l~~l  137 (242)
                      ....+
T Consensus       100 ~F~~~  104 (166)
T 2mys_B          100 AFKVL  104 (166)
T ss_pred             HHHHh
Confidence            44444

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=94.13  E-value=0.21  Score=37.93  Aligned_cols=66  Identities=6%  Similarity=0.041  Sum_probs=35.9

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..+..+|..|-.+....|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+.-+..+
T Consensus        96 ~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  161 (162)
T 1top_A           96 EELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV  161 (162)
T ss_dssp             HHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence            345555665543333456666666666666655444444444444445555666666666655543

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=94.10  E-value=0.46  Score=38.05  Aligned_cols=66  Identities=11%  Similarity=-0.093  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCC-----CCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-----DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv-----~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .+.|.+ |..+-......|+.+-+.+.+..+|+     .+..-.+-.+...+....-|.|+.+||+..+..+
T Consensus        32 ~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~  102 (198)
T 1juo_A           32 QDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL  102 (198)
T ss_dssp             CCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             cHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH
Confidence            466777 87774334458999999999999998     3455555566667777788999999999988763

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=94.10  E-value=0.25  Score=35.50  Aligned_cols=67  Identities=16%  Similarity=0.124  Sum_probs=54.9

Q ss_pred             HHHHHHHHHhcCCCC--CccChHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPYL--DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~~D-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..|.+.|.+|-+.+.  ..|..+-+.+++..     ||..+.+-.+--+...+....-|.|+-+||+..|.++.
T Consensus         9 ~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l~   82 (92)
T 3rm1_A            9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMIT   82 (92)
T ss_dssp             HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            578889999984332  49999999999999     99888777666677777888889999999999887753

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=94.08  E-value=0.17  Score=36.53  Aligned_cols=72  Identities=10%  Similarity=0.085  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL  127 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi  127 (242)
                      ...+.++|..|-......|..+-+.+.+..+|..+.+-.+-.+...+....-|.|+.+||+..+......+.
T Consensus        23 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   94 (105)
T 1wlz_A           23 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSETAATP   94 (105)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC-------
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhccCCCCc
Confidence            467889999995444568999999999999999887666655656666667799999999999887554443

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=94.05  E-value=0.48  Score=34.33  Aligned_cols=63  Identities=11%  Similarity=0.093  Sum_probs=53.3

Q ss_pred             HHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        59 l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      +.++|..+-......|+.+-+.+++..+|..+....+-.+...+....-|.|+.+||+..+..
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~   64 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS   64 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTC
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH
Confidence            577898886545568999999999999999887777777777888888899999999998864

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=94.05  E-value=0.23  Score=37.02  Aligned_cols=64  Identities=9%  Similarity=0.059  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ...+.++|..|-.+....|+.+-+.+++..+|+.|..-.+-.+.   .. .-|.|+.+||+..+....
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~~-~~g~i~~~eF~~~~~~~~   69 (143)
T 3j04_B            6 IQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMM---SE-APGPINFTMFLTMFGEKL   69 (143)
T ss_dssp             HHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTT---TT-SSSCCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHH---Hh-CCCCcCHHHHHHHHHHHh
Confidence            35677888888544456999999999999999988655433332   22 678999999999998753

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=94.04  E-value=0.38  Score=34.59  Aligned_cols=66  Identities=9%  Similarity=0.034  Sum_probs=46.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL---gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ....+.++|..|-.+....|+.+-+.+.+..+   |..+.+-.+-.+...+....-|.|+.+||+..|+
T Consensus        39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            45678888888854334578888888888888   6666555555555566666678888888887664

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=94.01  E-value=0.4  Score=34.53  Aligned_cols=66  Identities=6%  Similarity=0.033  Sum_probs=44.9

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL---gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ....+.++|..|-.+....|+.+-+.+.+..+   |..+.+-.+-.+...+....-|.|+.+||+.-|+
T Consensus        40 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           40 TPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             CHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             cHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            45677788888754444578888888888877   6666555554455555666677888888877654

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=93.99  E-value=0.2  Score=40.01  Aligned_cols=81  Identities=7%  Similarity=0.021  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHhcCC-CCCccChHHHHHHHHHcCCCCCchH-HHHHHHhhcccccccccHHHHHHHhHHcCCCC-HHHHHH
Q 026176           56 TRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIV-MLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS-LDKFRE  132 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~~DLgv~~ed~~-~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ds-i~~lk~  132 (242)
                      ...+.++|+.|-.. ....|+.+-+..++..+|++|.+.. +--+...+....-|.|+.+||+..+..++... .+.++.
T Consensus        13 ~~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~   92 (198)
T 2r2i_A           13 ATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRW   92 (198)
T ss_dssp             TSCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHH
Confidence            35677888888543 3458999999999999999986544 44555667777889999999999999887554 334444


Q ss_pred             HHHH
Q 026176          133 RISF  136 (242)
Q Consensus       133 ~l~~  136 (242)
                      ....
T Consensus        93 ~F~~   96 (198)
T 2r2i_A           93 YFKL   96 (198)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4433

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=93.98  E-value=0.48  Score=37.61  Aligned_cols=69  Identities=10%  Similarity=0.024  Sum_probs=54.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ....+.++|..+-.+....|+.+-+.+.+..+|+.+....+-.+...+....-|.|+.+||+..+....
T Consensus        35 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~  103 (204)
T 3e3r_A           35 GIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPM  103 (204)
T ss_dssp             -----CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCC
T ss_pred             hHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhc
Confidence            446788899999544456999999999999999999887777777788888889999999999887643

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=93.94  E-value=0.4  Score=34.47  Aligned_cols=66  Identities=8%  Similarity=0.059  Sum_probs=45.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL---gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ....+.++|..|-.+....|+.+-+.+.+..+   |..+.+-.+-.+...+....-|.|+.+||+..++
T Consensus        40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  108 (110)
T 1pva_A           40 SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH  108 (110)
T ss_dssp             CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            45677778877754444578888888888777   6666555555555556666677888888877665

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=93.92  E-value=0.23  Score=37.70  Aligned_cols=64  Identities=13%  Similarity=0.160  Sum_probs=34.2

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ..+..+|..|-......|..+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..|+
T Consensus        96 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  159 (161)
T 3fwb_A           96 DEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICT  159 (161)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            4455555555332234566666666666666555444444444445445555666666665544

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=93.90  E-value=0.92  Score=34.72  Aligned_cols=67  Identities=3%  Similarity=-0.201  Sum_probs=40.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ....+..+|..|-.+....|..+-+.+++..+|....+-.+-.+...+....-|.|+.+||+..|..
T Consensus        93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~  159 (166)
T 2mys_B           93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  159 (166)
T ss_pred             cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHh
Confidence            3456666777664333446777777777777775554444434444455555677777777776654

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=93.81  E-value=0.68  Score=36.22  Aligned_cols=109  Identities=10%  Similarity=0.024  Sum_probs=70.7

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhC-----CCCc-----hhhhhhhccccCCCCcCCHHHHHHHHHHhcCCCCCccChH
Q 026176            8 NRDKLQQFVSITGASEKAALQALKAS-----DWHL-----EGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVD   77 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~-----~w~l-----e~A~~~ff~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~d   77 (242)
                      .++.++.+...|+.+++.-..+.+..     +..|     ..++.....     .......+.++|..+-......|+.+
T Consensus         9 ~~~~l~~l~~~~~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~   83 (190)
T 1fpw_A            9 SKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFP-----FGSPEDFANHLFTVFDKDNNGFIHFE   83 (190)
T ss_dssp             TTHHHHHHTTTCCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCT-----TSCCSHHHHHHHHTCCSSCSSEECHH
T ss_pred             CHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcC-----CCCcHHHHHHHHHHHCCCCCCcEeHH
Confidence            45667888888888877665554432     2222     112222211     11234567888888865445689999


Q ss_pred             HHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           78 GITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        78 G~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      -+..++..++..+..-.+-.+-..+....-|.|+.+||+..+..
T Consensus        84 ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~  127 (190)
T 1fpw_A           84 EFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS  127 (190)
T ss_dssp             HHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            99999888887765555555555667777789999999998887

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=93.80  E-value=0.46  Score=34.10  Aligned_cols=67  Identities=7%  Similarity=0.018  Sum_probs=49.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL---gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ....+.++|..|-.+....|+.+-+.+++..+   |..+.+-.+-.+...+....-|.|+.+||+..+++
T Consensus        39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 1rwy_A           39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             CHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence            45788888888854444588888888888888   66666555555555666677788899888887754

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=93.75  E-value=0.51  Score=35.71  Aligned_cols=118  Identities=14%  Similarity=0.052  Sum_probs=62.6

Q ss_pred             CCCCcchHHHHHH-HHhhh-----C-CCHHHHHHHHHhCCCCchhhhhhhccccCCCCcCCHHHHHHHHHHhcCCCCCcc
Q 026176            2 HKLSRSNRDKLQQ-FVSIT-----G-ASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMI   74 (242)
Q Consensus         2 ~~l~~~q~~~i~~-F~~~T-----~-~s~~~A~~~L~~~~w~le~A~~~ff~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I   74 (242)
                      ..|++.+...+++ |..+-     | ++...-..+|+..+.++                 +...+..+|..+-......|
T Consensus         5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~-----------------~~~~~~~l~~~~D~~~~g~i   67 (158)
T 2jnf_A            5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQ-----------------TKSTIRQLIDEFDPFGNGDI   67 (158)
T ss_dssp             TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSC-----------------SHHHHHHHHHHHCTTCCSEE
T ss_pred             hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCC-----------------CHHHHHHHHHHhCCCCCCcC
Confidence            3566666666654 44333     1 34666666776654322                 34566667776644334467


Q ss_pred             ChHHHHHHHHHcCCCC----Cc-hHHHHHHHhhcccccccccHHHHHHHhHHcCCC-CHHHHHHHHHH
Q 026176           75 LVDGITLLCNDLQVDP----QD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID-SLDKFRERISF  136 (242)
Q Consensus        75 ~~dG~~~~~~DLgv~~----ed-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d-si~~lk~~l~~  136 (242)
                      +.+-...++....-..    .. -.+-.+-..+-...-|.|+++||...++.+|.. |.+.++..+..
T Consensus        68 ~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~  135 (158)
T 2jnf_A           68 DFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDE  135 (158)
T ss_dssp             CHHHHHHHHHHHCCCCCCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhccccchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHH
Confidence            7776666665543221    11 122222234455556777777777777776643 44444444443

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=93.70  E-value=0.18  Score=36.78  Aligned_cols=68  Identities=12%  Similarity=0.083  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ...+.++|..|-.+....|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.+||+..+....
T Consensus        31 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~   98 (107)
T 2d58_A           31 LEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR   98 (107)
T ss_dssp             HHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSSS
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcc
Confidence            36778888888544446899999999999999998777777777777777889999999999887654

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=93.68  E-value=0.029  Score=36.90  Aligned_cols=64  Identities=11%  Similarity=0.106  Sum_probs=49.9

Q ss_pred             HHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        59 l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      +.++|..|-.+....|+.+-+..++..+|..+.+-.+-.+...+....-|.|+.+||+..++++
T Consensus         2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~   65 (66)
T 3li6_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI   65 (66)
T ss_dssp             CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTCC
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            3467888865445689999999999999877765566666667777888999999999988654

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=93.66  E-value=0.41  Score=34.37  Aligned_cols=66  Identities=5%  Similarity=0.041  Sum_probs=44.2

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL---gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ....+.++|..|-.+....|+.+-+.+++..+   |..+.+-.+-.+...+....-|.|+.+||+..|+
T Consensus        39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            45677788888754334578888888888877   5555554444455555666677888888877653

>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1

Probab=93.62  E-value=0.067  Score=36.68  Aligned_cols=39  Identities=23%  Similarity=0.355  Sum_probs=33.7

Q ss_pred             HHHHHHHHhhhCC-CHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         9 ~~~i~~F~~~T~~-s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ++.|++.+++ |- ++..+++.|++++||++.|++--|.+|
T Consensus        18 ~~qi~~L~~M-GF~d~~~~~~AL~~~~gnve~Ave~L~~~~   57 (58)
T 1wr1_B           18 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLNGD   57 (58)
T ss_dssp             HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence            5679999998 75 577889999999999999999988764

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=93.60  E-value=1.2  Score=34.27  Aligned_cols=60  Identities=10%  Similarity=-0.096  Sum_probs=46.3

Q ss_pred             HHHhcCCCCCccChHHHHHHHHHcCC-----CCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           63 YNRYKDPYLDMILVDGITLLCNDLQV-----DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        63 Fd~Y~d~~~d~I~~dG~~~~~~DLgv-----~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      |..+-......|+.+-+.+.+..+|+     .+..-.+-.+...+....-|.|+.+||+..+..+
T Consensus         7 F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~   71 (167)
T 1gjy_A            7 YFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL   71 (167)
T ss_dssp             HHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred             HHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            55553333458999999999999998     4455556666677788888999999999988773

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=93.55  E-value=1.9  Score=32.91  Aligned_cols=137  Identities=7%  Similarity=0.058  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcC----CCCCchH-HH--------HHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ----VDPQDIV-ML--------VVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLg----v~~ed~~-~L--------vLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .++|.++|+.+-......|+.+-+.+.+..+|    ++|.+.. +.        .+...+.  .-|.|+.+||+..+...
T Consensus         5 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~   82 (174)
T 1q80_A            5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEM   82 (174)
T ss_dssp             HHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHH
Confidence            46789999999443345899999999999988    9987655 21        1222333  56899999999998876


Q ss_pred             CCCCHHHHHHHHHHHHHHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhhcCCCC
Q 026176          123 GIDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAI  202 (242)
Q Consensus       123 ~~dsi~~lk~~l~~l~~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~~~k~I  202 (242)
                      .....               .+.......+.+|...=..+.-.|+.+.-..+.+-+ +-. -..++..++-+...+...|
T Consensus        83 ~~~~~---------------~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-g~~-~~~~~~~~~~~D~d~dg~i  145 (174)
T 1q80_A           83 VKNPE---------------AKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML-GLD-KTMAPASFDAIDTNNDGLL  145 (174)
T ss_dssp             TTSTT---------------CHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH-TCC-GGGHHHHHHHHCTTCSSSB
T ss_pred             cCccc---------------HHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHc-CCC-HHHHHHHHHHhCCCCCceE
Confidence            43210               000011222223333222233345555555544443 211 2345555555555555678


Q ss_pred             CHhhhHHHH
Q 026176          203 SRDTWSQLL  211 (242)
Q Consensus       203 skD~W~~~l  211 (242)
                      +.+.+..++
T Consensus       146 ~~~ef~~~~  154 (174)
T 1q80_A          146 SLEEFVIAG  154 (174)
T ss_dssp             CHHHHHHHH
T ss_pred             eHHHHHHHH
Confidence            888776655

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=93.52  E-value=0.24  Score=35.10  Aligned_cols=65  Identities=20%  Similarity=0.276  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|..|-......|+.+-+.+++..+|++.+++.  .+...+....-|.|+.+||+..+.++
T Consensus        26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~--~~~~~~D~d~dg~I~~~EF~~~~~~~   90 (91)
T 2pmy_A           26 LARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAE--AVFQRLDADRDGAITFQEFARGFLGS   90 (91)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHH--HHHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHH--HHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence            367888999996555568999999999999997655433  33445566778999999999988764

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=93.48  E-value=2.1  Score=33.37  Aligned_cols=68  Identities=10%  Similarity=0.054  Sum_probs=54.4

Q ss_pred             CHHHHHHHHHHhcCCC-CCccChHHHHHHHHHc----CCCCCchHHHHHH-----------HhhcccccccccHHHHHHH
Q 026176           55 DTRHLEELYNRYKDPY-LDMILVDGITLLCNDL----QVDPQDIVMLVVS-----------WHMKAATMCEFSKQEFIGG  118 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~-~d~I~~dG~~~~~~DL----gv~~ed~~~LvLa-----------~~l~a~~~g~~tr~eF~~g  118 (242)
                      ...++.++|+.|.|.+ ...|+.+-+.+.+..+    |..+.+..+-.+.           ..+....-|.|+.+||+..
T Consensus        10 ~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~   89 (191)
T 2ccm_A           10 QRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKM   89 (191)
T ss_dssp             HHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred             HHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHH
Confidence            3578999999994433 4589999999999998    9988776665555           6677778899999999998


Q ss_pred             hHHc
Q 026176          119 LQSL  122 (242)
Q Consensus       119 ~~~l  122 (242)
                      +..+
T Consensus        90 ~~~~   93 (191)
T 2ccm_A           90 WAEC   93 (191)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=93.48  E-value=0.51  Score=37.67  Aligned_cols=65  Identities=2%  Similarity=-0.070  Sum_probs=47.8

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.++|..|-.+....|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus        93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  157 (191)
T 1y1x_A           93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF  157 (191)
T ss_dssp             HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            45667777775444457888888888888887776655555666666667788888888888776

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=93.47  E-value=0.25  Score=36.92  Aligned_cols=118  Identities=8%  Similarity=0.060  Sum_probs=79.2

Q ss_pred             CCCcchHHHHH-HHHhh----hC-CCHHHHHHHHHhCCCCchhh-hhhhc---cccCCC----------------Cc---
Q 026176            3 KLSRSNRDKLQ-QFVSI----TG-ASEKAALQALKASDWHLEGA-FDVFY---SQPQSK----------------SL---   53 (242)
Q Consensus         3 ~l~~~q~~~i~-~F~~~----T~-~s~~~A~~~L~~~~w~le~A-~~~ff---~~~~~~----------------~~---   53 (242)
                      .|++.+.+.++ -|..+    .| .+...-..+|+..+..+... +...|   +....+                ..   
T Consensus         4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~   83 (153)
T 3ox6_A            4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETAD   83 (153)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHH
T ss_pred             cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccc
Confidence            46666666654 34443    23 35677777787777655432 22222   111110                00   


Q ss_pred             -CCHHHHHHHHHHhcCCCCCccChHHHHHHHHH-cCCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           54 -TDTRHLEELYNRYKDPYLDMILVDGITLLCND-LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        54 -~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~D-Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                       .....+..+|..|-.+....|+.+-+.+++.. +|..+.+..+-.+...+....-|.|+.+||+..++
T Consensus        84 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  152 (153)
T 3ox6_A           84 MIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS  152 (153)
T ss_dssp             HHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred             cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence             12467888999995544569999999999999 89988777777777788888889999999998764

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=93.41  E-value=1.8  Score=33.11  Aligned_cols=51  Identities=2%  Similarity=-0.140  Sum_probs=41.7

Q ss_pred             CCccChHHHHHHHHHcCC-----CCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           71 LDMILVDGITLLCNDLQV-----DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        71 ~d~I~~dG~~~~~~DLgv-----~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...|+.+-+.+.+..||+     .+..-.+--+...+....-|.|+.+||+..+..
T Consensus        13 ~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~   68 (165)
T 1k94_A           13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA   68 (165)
T ss_dssp             GTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            348999999999999998     455555666667777888899999999998876

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=93.40  E-value=0.67  Score=36.12  Aligned_cols=50  Identities=6%  Similarity=0.060  Sum_probs=25.4

Q ss_pred             ccChHHHHHHHHHcCCC-CCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           73 MILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        73 ~I~~dG~~~~~~DLgv~-~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .|+.+-+..++..+|.. +....+-.+...+....-|.|+.+||+..+..+
T Consensus        35 ~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~   85 (183)
T 1s6c_A           35 VVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSIL   85 (183)
T ss_dssp             EECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence            55555555555555544 233333333444444455556666666555544

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=93.39  E-value=0.22  Score=37.53  Aligned_cols=79  Identities=8%  Similarity=0.007  Sum_probs=37.4

Q ss_pred             HHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHhHH-cCC-CCHHHHHHHH
Q 026176           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQS-LGI-DSLDKFRERI  134 (242)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~-l~~-dsi~~lk~~l  134 (242)
                      .+.++|..+-......|+.+-...++..+.........+..++ .+....-|.|+++||...++. +|. -+.+.++..+
T Consensus        39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~  118 (155)
T 3ll8_B           39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV  118 (155)
T ss_dssp             THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHH
Confidence            4455555554333345555655555555554443333333333 223444455666666655555 232 2344444444


Q ss_pred             HH
Q 026176          135 SF  136 (242)
Q Consensus       135 ~~  136 (242)
                      ..
T Consensus       119 ~~  120 (155)
T 3ll8_B          119 DK  120 (155)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A

Probab=93.33  E-value=0.093  Score=34.19  Aligned_cols=37  Identities=24%  Similarity=0.389  Sum_probs=31.8

Q ss_pred             HHHHHHHHhhhCC-CHHHHHHHHHhCCCCchhhhhhhcc
Q 026176            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYS   46 (242)
Q Consensus         9 ~~~i~~F~~~T~~-s~~~A~~~L~~~~w~le~A~~~ff~   46 (242)
                      .+.|++.+++ |- ++..+++.|++++||++.|++-.|.
T Consensus         8 ~~~i~~L~~M-GF~d~~~~~~AL~~~~gnv~~Ave~L~~   45 (46)
T 2bwb_A            8 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLN   45 (46)
T ss_dssp             HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHHC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence            5679999998 76 4677899999999999999998764

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=93.30  E-value=0.68  Score=34.67  Aligned_cols=77  Identities=9%  Similarity=0.106  Sum_probs=56.6

Q ss_pred             HHHHHHHHHhcCCC-CCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC--CCCHHHHHHH
Q 026176           57 RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRER  133 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~-~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~--~dsi~~lk~~  133 (242)
                      ..+.++|..|-.+. ...|+.+-+.+.+..+|+.|.+..+-.+...+...    |+.++|+..+....  ..+.+.++..
T Consensus        14 ~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l~~~   89 (146)
T 2qac_A           14 VDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEELIKM   89 (146)
T ss_dssp             SCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHHHHH
T ss_pred             HHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHHHHH
Confidence            45778888886545 56899999999999999999877766666666655    99999999998642  2344555544


Q ss_pred             HHHH
Q 026176          134 ISFM  137 (242)
Q Consensus       134 l~~l  137 (242)
                      ...+
T Consensus        90 F~~~   93 (146)
T 2qac_A           90 FAHF   93 (146)
T ss_dssp             HHTT
T ss_pred             HHHh
Confidence            4433

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=93.30  E-value=0.63  Score=36.08  Aligned_cols=66  Identities=12%  Similarity=0.157  Sum_probs=49.9

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..+.++|..|-.+....|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..+
T Consensus        74 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  139 (172)
T 2znd_A           74 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL  139 (172)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            467777888754444588888888888888887766666666666777777889999998888764

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=93.24  E-value=0.22  Score=34.95  Aligned_cols=67  Identities=13%  Similarity=0.063  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHhc-CCCCC-ccChHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYK-DPYLD-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~-d~~~d-~I~~dG~~~~~~D-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|..|- ..... .|+.+-+.+.+..     +|..+.+-.+-.+...+....-|.|+.+||+..|..+
T Consensus         8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~   81 (93)
T 1k2h_A            8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (93)
T ss_dssp             HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            367888999995 34445 8999999999998     9988876666666666666778999999999988764

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=93.24  E-value=0.52  Score=33.87  Aligned_cols=66  Identities=8%  Similarity=0.000  Sum_probs=40.9

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL---gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ....+.++|..|-.+....|+.+-+.+.+..+   |..+.+-.+-.+...+....-|.|+.+||+..++
T Consensus        40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            35667777777743334467777777777777   5555544444444455555667777777776553

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=93.21  E-value=1.4  Score=33.59  Aligned_cols=82  Identities=12%  Similarity=0.189  Sum_probs=63.7

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC--CCCHHHHHHHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRERI  134 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~--~dsi~~lk~~l  134 (242)
                      +.|.++|+.|=......|+.+=+..++..+|.+|.+..+-.+...+....-|.++.++|+..+....  ..+-++++...
T Consensus        10 ~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF   89 (148)
T 2lmt_A           10 AEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAF   89 (148)
T ss_dssp             HHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHH
Confidence            5678889998544456899999999999999999888888888888888899999999999887643  33445555544


Q ss_pred             HHHH
Q 026176          135 SFMR  138 (242)
Q Consensus       135 ~~l~  138 (242)
                      ..+.
T Consensus        90 ~~~D   93 (148)
T 2lmt_A           90 KIFD   93 (148)
T ss_dssp             HHHH
T ss_pred             HHHC
Confidence            4443

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=93.16  E-value=0.22  Score=37.85  Aligned_cols=113  Identities=12%  Similarity=0.176  Sum_probs=75.1

Q ss_pred             HHHHHHHHHHhcC--CCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC---CCCHHHH
Q 026176           56 TRHLEELYNRYKD--PYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG---IDSLDKF  130 (242)
Q Consensus        56 ~~~l~~lFd~Y~d--~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~---~dsi~~l  130 (242)
                      ...+.++|..|-.  .....|+.+-+.+.+..+|+.|....+-.+ ..+....-|.|+.+||+..+....   ......+
T Consensus         8 ~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l   86 (156)
T 1wdc_C            8 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADY   86 (156)
T ss_dssp             HHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHH
T ss_pred             HHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHH
Confidence            3678888988865  445689999999999999999987666666 666677789999999999998764   3445555


Q ss_pred             HHHHHHHHHHc---cchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHH
Q 026176          131 RERISFMRAEL---KDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQL  177 (242)
Q Consensus       131 k~~l~~l~~~l---~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~l  177 (242)
                      +.....+...=   -+..+|+.+.+-   +    | ..++.+.+..+.+.
T Consensus        87 ~~~F~~~D~d~~G~I~~~el~~~l~~---~----g-~~~~~~~~~~~~~~  128 (156)
T 1wdc_C           87 MEAFKTFDREGQGFISGAELRHVLTA---L----G-ERLSDEDVDEIIKL  128 (156)
T ss_dssp             HHHHHTTCSSSSSEEEHHHHHHHHHH---S----S-SCCCHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHH---c----C-CCCCHHHHHHHHHH
Confidence            55554443211   123335544431   1    1 23555566666665

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=93.13  E-value=1.4  Score=34.17  Aligned_cols=67  Identities=15%  Similarity=0.152  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHH-----HHHHHcCCCCCch-----HHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGIT-----LLCNDLQVDPQDI-----VMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~-----~~~~DLgv~~ed~-----~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .+.+.++|+.|-......|+.+-+.     ..+..+|+.|.+.     .+-.+...+....-|.|+.+||+..|..+
T Consensus        15 ~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~   91 (191)
T 1uhk_A           15 IGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKL   91 (191)
T ss_dssp             HHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHH
Confidence            4778899999954445689999998     7899999998765     34445556677778999999999988764

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=92.96  E-value=2.6  Score=32.87  Aligned_cols=84  Identities=13%  Similarity=0.042  Sum_probs=57.0

Q ss_pred             CHHHHHHHHHHhcCC-CCCccChHHHHHHHHHcCCCC-CchHHHHHHHhhcccccccccHHHHHHHhHHcCCC-CHHHHH
Q 026176           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID-SLDKFR  131 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~~DLgv~~-ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d-si~~lk  131 (242)
                      +...|.++|..+-.. ....|+.+-+..++..+|..+ .+..+-.+...+....-|.|+.+||+..+..++.. +.+.++
T Consensus        23 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~  102 (190)
T 2l2e_A           23 DKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLI  102 (190)
T ss_dssp             CSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHH
Confidence            345677778777543 345899999999999987653 22333344556677778999999999999887643 345555


Q ss_pred             HHHHHHH
Q 026176          132 ERISFMR  138 (242)
Q Consensus       132 ~~l~~l~  138 (242)
                      .....+.
T Consensus       103 ~~f~~~D  109 (190)
T 2l2e_A          103 WAFQLYD  109 (190)
T ss_dssp             HHHHHHC
T ss_pred             HHHhHcc
Confidence            5554443

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=92.96  E-value=0.31  Score=36.25  Aligned_cols=62  Identities=11%  Similarity=0.092  Sum_probs=29.2

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHh
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (242)
                      ..+..+|..|-.+....|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||+.-+
T Consensus        84 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l  145 (147)
T 4ds7_A           84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALL  145 (147)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHH
Confidence            34444555552222335555555555555554444433333333344 444555555555443

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=92.94  E-value=0.2  Score=34.75  Aligned_cols=66  Identities=15%  Similarity=0.141  Sum_probs=52.9

Q ss_pred             HHHHHHHHHhcC-CCCC-ccChHHHHHHHHH---cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKD-PYLD-MILVDGITLLCND---LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d-~~~d-~I~~dG~~~~~~D---Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..+.++|..|-. .... .|+.+-+.+.+..   +|..+.+..+-.+...+....-|.|+.+||+..+..+
T Consensus        10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   80 (90)
T 1k8u_A           10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   80 (90)
T ss_dssp             HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            578889999973 4455 8999999999997   9987776666666666666778999999999988764

>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=92.92  E-value=0.096  Score=36.46  Aligned_cols=38  Identities=24%  Similarity=0.351  Sum_probs=35.0

Q ss_pred             HHHHHHHhhhCCCHHHHHHHHHhCCC-Cchhhhhhhcccc
Q 026176           10 DKLQQFVSITGASEKAALQALKASDW-HLEGAFDVFYSQP   48 (242)
Q Consensus        10 ~~i~~F~~~T~~s~~~A~~~L~~~~w-~le~A~~~ff~~~   48 (242)
                      +.|++.+++ |-++..|++.|..++| |++.|++-.|+++
T Consensus        21 ~~i~~L~~M-GF~~~~a~~AL~~t~~~nve~A~ewL~~~~   59 (64)
T 2cpw_A           21 SALDVLLSM-GFPRARAQKALASTGGRSVQTACDWLFSHS   59 (64)
T ss_dssp             CHHHHHHHH-TCCHHHHHHHHHHTTTSCHHHHHHHHHSCC
T ss_pred             HHHHHHHHc-CCCHHHHHHHHHHcCCCCHHHHHHHHHhCC
Confidence            579999996 9999999999999999 9999999998875

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=92.88  E-value=2.3  Score=33.17  Aligned_cols=109  Identities=15%  Similarity=0.081  Sum_probs=74.5

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhC-----CCCch-----hhhhhhccccCCCCcCCHHHHHHHHHHhcCCCCCccChH
Q 026176            8 NRDKLQQFVSITGASEKAALQALKAS-----DWHLE-----GAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVD   77 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~-----~w~le-----~A~~~ff~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~d   77 (242)
                      ..+.+++++..++.++....++.+..     +..|.     .++.....     .......+.++|..+-......|+.+
T Consensus         9 ~~~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~-----~~~~~~~~~~~f~~~D~d~~G~i~~~   83 (190)
T 2l2e_A            9 SQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFP-----FGDPSAFAEYVFNVFDADKNGYIDFK   83 (190)
T ss_dssp             CHHHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCC-----CSCHHHHHHHHHHHHCSSSTTCEEHH
T ss_pred             CHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCC-----CCCccHHHHHHHHHhcCCCCCeEeHH
Confidence            34567888888888877766665542     22222     22222211     11235678899999865555689999


Q ss_pred             HHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           78 GITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        78 G~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      -+..++..++..+..-.+-.+-..+....-|.|+.+||...+..
T Consensus        84 ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~  127 (190)
T 2l2e_A           84 EFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA  127 (190)
T ss_dssp             HHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence            99999999987765444444555667777899999999999877

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=92.86  E-value=0.42  Score=36.64  Aligned_cols=65  Identities=11%  Similarity=0.166  Sum_probs=37.4

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.++|..|-......|..+-+.+++..+|....+-.+-.+...+....-|.|+.+||+..|++
T Consensus       101 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  165 (169)
T 3qrx_A          101 EEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK  165 (169)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            44555666663333346666666666666665555444444555555555666666666665543

>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.78  E-value=0.12  Score=37.99  Aligned_cols=40  Identities=20%  Similarity=0.336  Sum_probs=36.5

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ..+.|++.+++ |-++..|++.|..++||++.|++-.|++.
T Consensus        29 ~e~~i~~L~~M-GF~~~~a~~AL~~t~~nve~A~ewL~~~~   68 (83)
T 2dai_A           29 DEAALRQLTEM-GFPENRATKALQLNHMSVPQAMEWLIEHA   68 (83)
T ss_dssp             CHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHGG
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            46789999996 99999999999999999999999998764

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=92.50  E-value=0.28  Score=32.96  Aligned_cols=66  Identities=12%  Similarity=0.139  Sum_probs=49.6

Q ss_pred             CHHHHHHHHHHhcC-CCCC-ccChHHHHHHHHH-cCCC---CCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           55 DTRHLEELYNRYKD-PYLD-MILVDGITLLCND-LQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d-~~~d-~I~~dG~~~~~~D-Lgv~---~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ....+.++|..|-. +... .|+.+-+.+++.. +|..   ++.+..  +...+....-|.|+.+||+..|..+
T Consensus         5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~--~~~~~D~~~dg~i~~~eF~~~~~~~   76 (78)
T 1cb1_A            5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDD--LFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSH--HHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHH--HHHHhcCCCCCCCcHHHHHHHHHHh
Confidence            45789999999975 4455 8999999999985 8853   343333  3345566677999999999988764

>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1

Probab=92.44  E-value=0.22  Score=35.74  Aligned_cols=40  Identities=25%  Similarity=0.441  Sum_probs=35.1

Q ss_pred             HHHHHHHHhhhCC-CHHHHHHHHHhCCCCchhhhhhhccccC
Q 026176            9 RDKLQQFVSITGA-SEKAALQALKASDWHLEGAFDVFYSQPQ   49 (242)
Q Consensus         9 ~~~i~~F~~~T~~-s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (242)
                      ++.|++.+++ |. ++..+++.|++++||++.|++-.|..+.
T Consensus        30 e~qi~qL~eM-GF~dr~~~~~AL~~t~Gnve~Ave~L~~~~~   70 (74)
T 1vej_A           30 QQELEELKAL-GFANRDANLQALVATDGDIHAAIEMLLGASG   70 (74)
T ss_dssp             HHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence            5789999998 76 5788899999999999999999998753

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=92.43  E-value=0.48  Score=34.74  Aligned_cols=67  Identities=13%  Similarity=0.145  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHhcCCCC-C-ccChHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYL-D-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~-d-~I~~dG~~~~~~D-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...|.+.|..|-+.+. . .|..+-+..++..     ||..+.+-.+--+...+....-|.|+-+||+..|..+
T Consensus         9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   82 (99)
T 2y5i_A            9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (99)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            3578889999952233 3 8999999999986     7777766555556666777788999999999998764

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=92.43  E-value=0.25  Score=37.71  Aligned_cols=67  Identities=12%  Similarity=0.029  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCC-CCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv-~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.+.|..|-.+....|+.+-+.+.+..+|+ .+.+-.+-.+...+....-|.|+.+||+..|.++
T Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~  106 (135)
T 3h4s_E           39 VSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRL  106 (135)
T ss_dssp             HHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence            467889999995444569999999999999997 6666555556666777778999999999999886

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=92.37  E-value=1.1  Score=34.77  Aligned_cols=68  Identities=7%  Similarity=-0.008  Sum_probs=33.3

Q ss_pred             CCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .....+.++|..+-......|+.+-...++..++..+..-.+-.+-..+....-|.|+.+||...+..
T Consensus        53 ~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~  120 (183)
T 1s6c_A           53 DASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA  120 (183)
T ss_dssp             CCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            34455566666654333345666666666655544332222222333334444455555555554443

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=92.35  E-value=0.48  Score=35.87  Aligned_cols=66  Identities=8%  Similarity=0.026  Sum_probs=39.0

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHh--hcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH--MKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~--l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...+.++|..|-......|..+-+.+++..+|..+.+-.+-.+...  +....-|.|+.+||+..+..
T Consensus        83 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  150 (156)
T 1wdc_C           83 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA  150 (156)
T ss_dssp             HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence            4566666666643333467777777777777765544443334444  45555667777777766654

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=92.18  E-value=1.9  Score=40.68  Aligned_cols=79  Identities=14%  Similarity=0.137  Sum_probs=60.6

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC--CCCHHHHHHHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRERI  134 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~--~dsi~~lk~~l  134 (242)
                      +.|.++|+.|-.+....|+.+=+.+.+..||++|.+-.+--|...+....-|.|+.+||+..+...-  .++.+.|+...
T Consensus       302 ~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAF  381 (440)
T 3u0k_A          302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAF  381 (440)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHH
Confidence            6678889888655556999999999999999999888888888888888899999999999886532  23334444443


Q ss_pred             H
Q 026176          135 S  135 (242)
Q Consensus       135 ~  135 (242)
                      .
T Consensus       382 k  382 (440)
T 3u0k_A          382 R  382 (440)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=92.09  E-value=2.1  Score=33.29  Aligned_cols=83  Identities=11%  Similarity=0.097  Sum_probs=53.0

Q ss_pred             CHHHHHHHHHHhcCC-CCCccChHHHHHHHHHcC-CCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCC-CHHHHH
Q 026176           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID-SLDKFR  131 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~~DLg-v~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d-si~~lk  131 (242)
                      +...+.++|+.|... ....|+.+-+..++..++ ....+..+-.+...+....-|.|+.+||+..+..++.. +.+.++
T Consensus        23 ~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~  102 (190)
T 1g8i_A           23 TEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLR  102 (190)
T ss_dssp             CHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHHHHH
Confidence            456677777776533 245789999988888882 12223334445556677778999999999999876533 233444


Q ss_pred             HHHHHH
Q 026176          132 ERISFM  137 (242)
Q Consensus       132 ~~l~~l  137 (242)
                      .....+
T Consensus       103 ~~f~~~  108 (190)
T 1g8i_A          103 WAFKLY  108 (190)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            444433

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=92.08  E-value=1.4  Score=35.23  Aligned_cols=78  Identities=9%  Similarity=-0.003  Sum_probs=58.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC--CCHHHHHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI--DSLDKFRE  132 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~--dsi~~lk~  132 (242)
                      ....|.++|..|-.+....|+.+-+..++..||+.+..-.+-.+...+    -|.|+.++|+..+.....  ++...++.
T Consensus        55 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~  130 (196)
T 3dtp_E           55 QVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIVN  130 (196)
T ss_dssp             THHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHHHHHH
Confidence            357899999999554456999999999999999999776655554444    789999999999987533  34455554


Q ss_pred             HHHH
Q 026176          133 RISF  136 (242)
Q Consensus       133 ~l~~  136 (242)
                      ....
T Consensus       131 ~F~~  134 (196)
T 3dtp_E          131 AFNL  134 (196)
T ss_dssp             HHHT
T ss_pred             HHHH
Confidence            4433

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=92.05  E-value=0.13  Score=35.58  Aligned_cols=64  Identities=13%  Similarity=0.041  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHh
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (242)
                      ...+.++|..|-......|+.+-+.+.+..+|..+.+-.+-.+...+....-|.|+.+||+..+
T Consensus        22 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           22 IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             TTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3568889999854445689999999999999998877777777777777788999999998754

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=91.95  E-value=0.45  Score=35.29  Aligned_cols=67  Identities=7%  Similarity=0.025  Sum_probs=42.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ....+..+|..|-.+....|..+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus        74 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  140 (145)
T 2bl0_B           74 QSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT  140 (145)
T ss_dssp             GHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence            3466777777774333446777777777777776655444444444555555677777777776654

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=91.93  E-value=2.7  Score=32.73  Aligned_cols=82  Identities=12%  Similarity=0.078  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHhcCC-CCCccChHHHHHHHHHcCCCCCc-hHHHHHHHhhcccccccccHHHHHHHhHHcCCCC-HHHHHH
Q 026176           56 TRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS-LDKFRE  132 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~~DLgv~~ed-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ds-i~~lk~  132 (242)
                      +..|.++|+.|... ....|+.+-+.+++..+|..+.. ..+--+...+....-|.|+.+||+..+..++... .+.++.
T Consensus        24 ~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~  103 (193)
T 1bjf_A           24 EHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKW  103 (193)
T ss_dssp             HHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHHH
Confidence            34455555555422 23467777777777777765532 2233344455566667777777777777765443 344555


Q ss_pred             HHHHH
Q 026176          133 RISFM  137 (242)
Q Consensus       133 ~l~~l  137 (242)
                      ....+
T Consensus       104 ~f~~~  108 (193)
T 1bjf_A          104 AFSMY  108 (193)
T ss_dssp             HHHHH
T ss_pred             HHhhc
Confidence            55444

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=91.92  E-value=1.7  Score=35.73  Aligned_cols=63  Identities=11%  Similarity=0.094  Sum_probs=26.6

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (242)
                      ...+..+|..|-.+..+.|+.+-...++..+      -.+-.+-..+-...-|.|+++||...++.+|.
T Consensus        86 ~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~  148 (220)
T 3sjs_A           86 PQTALRMMRIFDTDFNGHISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLGF  148 (220)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCC
Confidence            3445555555532222345555554444443      11111122223334455555555555555443

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=91.89  E-value=1.9  Score=35.52  Aligned_cols=68  Identities=7%  Similarity=0.006  Sum_probs=30.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ....+.++|..+-......|+.+-...++..++..+..-.+-.+-..+....-|.|+++||...++.+
T Consensus        87 ~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~  154 (224)
T 1s1e_A           87 ASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI  154 (224)
T ss_dssp             CHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHH
Confidence            34445555555533333355555555555544433322222222223334444555555555555443

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=91.87  E-value=1.9  Score=33.01  Aligned_cols=142  Identities=8%  Similarity=0.012  Sum_probs=82.1

Q ss_pred             CHHHHHHHHHHhcCC-CCCccChHHHHHHHHHcC----CCCCchHHHHH-----------HHhhcccccccccHHHHHHH
Q 026176           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQ----VDPQDIVMLVV-----------SWHMKAATMCEFSKQEFIGG  118 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~~DLg----v~~ed~~~LvL-----------a~~l~a~~~g~~tr~eF~~g  118 (242)
                      ..+.+.++|+.|.|. ....|+.+-+...+..+|    ..+....+-.|           ...+....-|.|+.+||+..
T Consensus         6 ~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~   85 (185)
T 2sas_A            6 QKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAM   85 (185)
T ss_dssp             HHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred             HHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHH
Confidence            357899999999333 345899999999999888    77765444333           55666777899999999998


Q ss_pred             hHHcCCC--CHHHHHHHHHHHHHHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHh
Q 026176          119 LQSLGID--SLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQA  196 (242)
Q Consensus       119 ~~~l~~d--si~~lk~~l~~l~~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~  196 (242)
                      +......  +...             .+...+...+-+|...=..+.-.|+.+.-..+.+.+ +-. -..+...++-+..
T Consensus        86 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~-g~~-~~~~~~~~~~~D~  150 (185)
T 2sas_A           86 WEKTIATCKSVAD-------------LPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF-QLQ-CADVPAVYNVITD  150 (185)
T ss_dssp             HHHHHHTCCSGGG-------------SCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSS-CCC-CSSHHHHHHHHHT
T ss_pred             HHHHhccccchhh-------------hhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHh-CCC-HHHHHHHHHHhcC
Confidence            8765211  0100             000112222233333322233445555544443221 111 2345556666666


Q ss_pred             hcCCCCCHhhhHHHH
Q 026176          197 KHNKAISRDTWSQLL  211 (242)
Q Consensus       197 ~~~k~IskD~W~~~l  211 (242)
                      .+...||.+.+..++
T Consensus       151 d~dG~i~~~ef~~~~  165 (185)
T 2sas_A          151 GGKVTFDLNRYKELY  165 (185)
T ss_dssp             TTTSCCSHHHHHHHH
T ss_pred             CCCCcCcHHHHHHHH
Confidence            666778888766544

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=91.71  E-value=0.31  Score=36.35  Aligned_cols=100  Identities=10%  Similarity=0.046  Sum_probs=65.9

Q ss_pred             CHHHHHHHHHhCCCCchh-hhhhhccccC---------------CCCcCCHHHHHHHHHHhcCCCCCccChHHHHHHHHH
Q 026176           22 SEKAALQALKASDWHLEG-AFDVFYSQPQ---------------SKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCND   85 (242)
Q Consensus        22 s~~~A~~~L~~~~w~le~-A~~~ff~~~~---------------~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~D   85 (242)
                      +...-..+|+..+.++.. .+...+....               .........+..+|..|-......|+.+-+.+++..
T Consensus        25 ~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~  104 (143)
T 3j04_B           25 DKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTT  104 (143)
T ss_dssp             CHHHHHHHHHHTSCCCCHHHHHTTTTTSSSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHT
T ss_pred             CHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH
Confidence            566667777776655432 2333333211               112234567888888885444458888888888888


Q ss_pred             cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           86 LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        86 Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      +|..+.+-.+-.+...+....-|.|+.+||+..|++
T Consensus       105 ~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  140 (143)
T 3j04_B          105 MGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH  140 (143)
T ss_dssp             SSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred             cCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            888776666666666677777788999999887764

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=91.70  E-value=0.38  Score=36.03  Aligned_cols=67  Identities=10%  Similarity=0.133  Sum_probs=54.4

Q ss_pred             CCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      .....+.++|..|-.+....|..+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..|.
T Consensus        80 ~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1m45_A           80 AKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  146 (148)
T ss_dssp             CCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             ccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            3457899999999544456899999999999999888766666666667777789999999998875

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=91.70  E-value=2.5  Score=33.60  Aligned_cols=83  Identities=11%  Similarity=0.063  Sum_probs=46.8

Q ss_pred             CHHHHHHHHHHhcCC-CCCccChHHHHHHHHHcCCC-CCchHHHHHHHhhcccccccccHHHHHHHhHHcCC-CCHHHHH
Q 026176           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI-DSLDKFR  131 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~~DLgv~-~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~-dsi~~lk  131 (242)
                      +...+.++|+.+... ....|+.+-+..++..+|.. +....+-.+...+....-|.|+.+||+..+..++. .+.+.++
T Consensus        31 ~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~  110 (207)
T 2d8n_A           31 SEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLE  110 (207)
T ss_dssp             CHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHH
T ss_pred             CHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHH
Confidence            345566666655432 23467777777777777664 33333444444555566677777777777766653 2334455


Q ss_pred             HHHHHH
Q 026176          132 ERISFM  137 (242)
Q Consensus       132 ~~l~~l  137 (242)
                      ..+..+
T Consensus       111 ~~f~~~  116 (207)
T 2d8n_A          111 WAFSLY  116 (207)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            544444

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=91.66  E-value=0.65  Score=33.59  Aligned_cols=67  Identities=13%  Similarity=0.157  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHhcC-CC-CCccChHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKD-PY-LDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d-~~-~d~I~~dG~~~~~~D-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...|.+.|..|-. .. ...|+.+-+.+++..     +|..+.+-.+--+...+....-|.|+-+||+..|..+
T Consensus         8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   81 (95)
T 1j55_A            8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (95)
T ss_dssp             HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence            3678889999962 32 348999999999986     6766654444455556677778999999999988753

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=91.62  E-value=1  Score=37.79  Aligned_cols=68  Identities=12%  Similarity=0.005  Sum_probs=38.8

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ....+..+|..+-.+....|+.+-+..++..++..+..-.+-.+-..+....-|.|+++||...+..+
T Consensus       127 ~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~  194 (256)
T 2jul_A          127 ATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI  194 (256)
T ss_dssp             CHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            34556666666654334467777777666666554433333333334455556677777777766654

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=91.56  E-value=1.6  Score=43.10  Aligned_cols=66  Identities=6%  Similarity=-0.064  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHc--------CCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL--------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL--------gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .+.+.++|+++- +....|+.+-+.+.+..+        |..+..-.+-.+...+....-|.|+.+||+..|..+
T Consensus       531 ~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~  604 (714)
T 3bow_A          531 GDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI  604 (714)
T ss_dssp             CHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            468999999998 445689999999999998        777776666667777888888999999999999874

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=91.55  E-value=1.1  Score=34.32  Aligned_cols=77  Identities=13%  Similarity=0.053  Sum_probs=53.9

Q ss_pred             HHHHHHhcCCCCCccChHHHHHHHHHcCCCCCc--------hHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHH
Q 026176           60 EELYNRYKDPYLDMILVDGITLLCNDLQVDPQD--------IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR  131 (242)
Q Consensus        60 ~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed--------~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk  131 (242)
                      ..+|..+-......|+.+-...++..+...+..        ..+-.+-..+....-|.|+++||...++.+| -+.+.++
T Consensus        61 ~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-~~~~~~~  139 (176)
T 1nya_A           61 DYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG-MSKAEAA  139 (176)
T ss_dssp             HHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT-CCHHHHH
T ss_pred             HHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC-CCHHHHH
Confidence            377777754444589999999988887766554        2233334455667789999999999999988 5666666


Q ss_pred             HHHHHH
Q 026176          132 ERISFM  137 (242)
Q Consensus       132 ~~l~~l  137 (242)
                      ..+..+
T Consensus       140 ~~~~~~  145 (176)
T 1nya_A          140 EAFNQV  145 (176)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            555554

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=91.55  E-value=0.7  Score=34.27  Aligned_cols=66  Identities=6%  Similarity=-0.024  Sum_probs=44.9

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ....+.++|..|-.+....|..+-+.+++..+|..+.+-.+-.+... ....-|.|+.+||+.-|..
T Consensus        83 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~  148 (149)
T 2mys_C           83 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS  148 (149)
T ss_pred             hHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence            34667778887754444578888888888888876644444444444 5566688888888877653

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=91.50  E-value=0.41  Score=38.71  Aligned_cols=66  Identities=6%  Similarity=0.012  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...|.++|..+-......|+.+-+.+.+..+|..+....+-.+...+....-|.|+.+||+..+..
T Consensus        56 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~  121 (197)
T 3pm8_A           56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATID  121 (197)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCC
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            477888999985444569999999999999999988777777777888788899999999987754

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=91.50  E-value=1.1  Score=35.69  Aligned_cols=64  Identities=8%  Similarity=0.017  Sum_probs=36.4

Q ss_pred             ccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC--CCHHHHHHHHHHH
Q 026176           73 MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI--DSLDKFRERISFM  137 (242)
Q Consensus        73 ~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~--dsi~~lk~~l~~l  137 (242)
                      .|..+-+..++..+|++++++.-+.-..-... .-|.|+++||...+..++.  .+.+.++..+..+
T Consensus        15 ~l~~~el~~~~~~~~~~~~~i~~~f~~~d~~~-~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~   80 (207)
T 2d8n_A           15 ALSKEILEELQLNTKFSEEELCSWYQSFLKDC-PTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSF   80 (207)
T ss_dssp             CCCHHHHHHHHHHSSCCHHHHHHHHHHHHHHC-TTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCCHHHHHHHHHHHHhhC-CCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHh
Confidence            56777777777777766655555433322211 3467777777777777654  3444444444443

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=91.47  E-value=2.4  Score=33.04  Aligned_cols=114  Identities=12%  Similarity=0.024  Sum_probs=67.3

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhCC-----CCchhh-hhhhccccCCCCcCCHHHHHHHHHHhcCCCCCccChHHHH
Q 026176            7 SNRDKLQQFVSITGASEKAALQALKASD-----WHLEGA-FDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGIT   80 (242)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~~-----w~le~A-~~~ff~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~   80 (242)
                      -+++.++.....|+.+++....+.+..+     ..|... +...+..- .........+.++|..+-......|+.+-+.
T Consensus         8 l~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~   86 (193)
T 1bjf_A            8 LRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNF-FPYGDASKFAEHVFRTFDANGDGTIDFREFI   86 (193)
T ss_dssp             CCHHHHHHHHHHSSCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTT-SSSSCCHHHHHHHHHHHCSSCSSEEEHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHh-cCcCChHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            3456677788888888776655544321     111110 01111110 1112234567888888865445688888888


Q ss_pred             HHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           81 LLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        81 ~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .++..++..+..-.+-.+-..+....-|.|+++||...+..
T Consensus        87 ~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~  127 (193)
T 1bjf_A           87 IALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA  127 (193)
T ss_dssp             HHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHH
Confidence            88888877654444444445566677788888888876654

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=91.47  E-value=0.13  Score=38.89  Aligned_cols=68  Identities=16%  Similarity=0.147  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhccc--ccccccHHHHHHHhHHcC
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA--TMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~--~~g~~tr~eF~~g~~~l~  123 (242)
                      ...+.++|..|-......|+.+-+.+.+..+|+.|....+-.+...+...  .-|.|+.+||+..+....
T Consensus         9 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~   78 (151)
T 1w7j_B            9 LEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVA   78 (151)
T ss_dssp             --CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHh
Confidence            45688899999655556899999999999999999876666665556555  678999999999998764

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=91.46  E-value=3.4  Score=34.01  Aligned_cols=69  Identities=14%  Similarity=0.188  Sum_probs=50.5

Q ss_pred             CHHHHHHHHHHhcCCCC-CccChHHHHHHHHHc-CCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           55 DTRHLEELYNRYKDPYL-DMILVDGITLLCNDL-QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~~DL-gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ++..+..+++.|++.++ ..|+.+-+.+++..+ +..+....+-.+...+....-|.|+.+||+.++..+.
T Consensus        62 s~~ei~~l~~~F~~~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~  132 (229)
T 3dd4_A           62 TKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILL  132 (229)
T ss_dssp             HHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHc
Confidence            35677788888865433 489999999988875 3444444444566677777889999999999987754

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=91.36  E-value=2.3  Score=40.06  Aligned_cols=81  Identities=14%  Similarity=0.151  Sum_probs=60.5

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC--CCHHHHHHHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI--DSLDKFRERI  134 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~--dsi~~lk~~l  134 (242)
                      +.+.++|..+-.+....|+.+-+.+++..+|..+..-.+-.+...+....-|.|+.+||+..|..+..  +..+.++...
T Consensus       312 ~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aF  391 (450)
T 3sg6_A          312 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAF  391 (450)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHH
Confidence            68889999995444469999999999999999998777777777778888899999999999976432  2334444443


Q ss_pred             HHH
Q 026176          135 SFM  137 (242)
Q Consensus       135 ~~l  137 (242)
                      ..+
T Consensus       392 k~f  394 (450)
T 3sg6_A          392 RVF  394 (450)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            333

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=91.36  E-value=0.72  Score=34.82  Aligned_cols=62  Identities=15%  Similarity=0.145  Sum_probs=28.7

Q ss_pred             HHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHh
Q 026176           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (242)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (242)
                      .+.+.|..|-.+....|..+-+.+.+..+|..+.+..+--+...+....-|.|+.+||+..|
T Consensus        80 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~  141 (143)
T 2obh_A           80 EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (143)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            44455555532222355555555555555544433333333333444444555555555443

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=91.32  E-value=0.39  Score=39.04  Aligned_cols=139  Identities=10%  Similarity=0.052  Sum_probs=78.0

Q ss_pred             CHHHHHHHHHHhcCC-CCCccChHHHHHHHHHcCCCCCchH-HHHHHHhhcccccccccHHHHHHHhHHcCCCC-HHHHH
Q 026176           55 DTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIV-MLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS-LDKFR  131 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~~DLgv~~ed~~-~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ds-i~~lk  131 (242)
                      +.+.|.++|+.|-.. ....|+.+-+.+++..+|++|.... +--+...+....-|.|+.+||+..+..++... .+.++
T Consensus        17 s~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~   96 (211)
T 2ggz_A           17 PTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLK   96 (211)
T ss_dssp             -------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHH
Confidence            456778888877543 3458999999999999999875433 44455566777889999999999999887544 34455


Q ss_pred             HHHHHHHHHc---cchHHHHHHHHHHhHhhhhcCcccccH-HHHHHHHHHhcCCC-CcccHHHHHHHHHh
Q 026176          132 ERISFMRAEL---KDEQKFREIYNFAFAWAKEKGQKSLAL-DTAIGMWQLLFAEK-QWPLVDHWCQFLQA  196 (242)
Q Consensus       132 ~~l~~l~~~l---~~~~~Fk~~Y~f~F~f~k~~gqk~l~~-d~Ai~~W~lll~~~-~~~~l~~W~~FL~~  196 (242)
                      .....++..=   -+..+|+.++.-...   ..+...+.. +.+..+++.+=..+ +.=-++.|+.++..
T Consensus        97 ~~F~~~D~d~~G~I~~~E~~~~l~~~~~---~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  163 (211)
T 2ggz_A           97 WYFKLYDADGNGSIDKNELLDMFMAVQA---LNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK  163 (211)
T ss_dssp             HHHHHHCTTCSSSBCHHHHHHHHHHHTT---SSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHHHh---hcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence            5554443221   123345554443221   111122222 33555555543322 23346677777754

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=91.32  E-value=0.46  Score=36.88  Aligned_cols=122  Identities=9%  Similarity=0.103  Sum_probs=67.9

Q ss_pred             CCCcchHHHHHH-HHhh----hC-CCHHHHHHHHHhCCCCchh-hhhhhcc---ccCCCC----------------cCCH
Q 026176            3 KLSRSNRDKLQQ-FVSI----TG-ASEKAALQALKASDWHLEG-AFDVFYS---QPQSKS----------------LTDT   56 (242)
Q Consensus         3 ~l~~~q~~~i~~-F~~~----T~-~s~~~A~~~L~~~~w~le~-A~~~ff~---~~~~~~----------------~~~~   56 (242)
                      .|++.+...+++ |..+    .| ++...-..+|...+.++.. .+...|.   ....+.                ....
T Consensus         4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~   83 (179)
T 2f2o_A            4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE   83 (179)
T ss_dssp             --CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccH
Confidence            466666666554 4333    12 3567777788877765432 2333331   111100                0112


Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (242)
                      ..+..+|..|-.+....|..+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+...+.
T Consensus        84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~  151 (179)
T 2f2o_A           84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGG  151 (179)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC---
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCC
Confidence            44667777774333457888888888888887665555555556666667788888888887766543

>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A

Probab=91.16  E-value=0.18  Score=38.85  Aligned_cols=40  Identities=20%  Similarity=0.380  Sum_probs=35.4

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      .+.|++.+++=-.++..+++.|.+++||++.||+..|+.|
T Consensus        67 ~~qL~qL~eMGF~d~~~ni~AL~~t~Gdve~AVe~L~~~~  106 (108)
T 2cwb_A           67 QPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGG  106 (108)
T ss_dssp             HHHHHHHHTTTCCCHHHHHHHHHHHTSCHHHHHHHHHHTS
T ss_pred             HHHHHHHHHcCCCCHHHHHHHHHHhCCCHHHHHHHHHhcC
Confidence            6789999997556788999999999999999999999775

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=91.05  E-value=0.32  Score=34.60  Aligned_cols=64  Identities=14%  Similarity=0.069  Sum_probs=48.6

Q ss_pred             HHHHHHHHHhcC-CCCC-ccChHHHHHHH-HHcCCC--CCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKD-PYLD-MILVDGITLLC-NDLQVD--PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d-~~~d-~I~~dG~~~~~-~DLgv~--~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..|.++|..|-. .... .|+.+-+.+++ ..+|..  .+++.  .+...+....-|.|+.+||+..|..+
T Consensus        10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~--~l~~~~D~d~dG~I~~~EF~~~~~~~   78 (93)
T 1xk4_A           10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGAD--VWFKELDINTDGAVNFQEFLILVIKM   78 (93)
T ss_dssp             HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHH--HHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHH--HHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            578889999976 4455 89999999999 789844  44443  33445566677999999999998765

>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1

Probab=90.98  E-value=0.11  Score=36.16  Aligned_cols=39  Identities=21%  Similarity=0.307  Sum_probs=35.0

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhC-CCCchhhhhhhcccc
Q 026176            9 RDKLQQFVSITGASEKAALQALKAS-DWHLEGAFDVFYSQP   48 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~-~w~le~A~~~ff~~~   48 (242)
                      .+.|++++++ |-++..|++.|.++ +||++.|++-.|+++
T Consensus        10 ~~~v~~L~~M-GF~~~~a~~AL~~t~~~nve~A~ewLl~~~   49 (64)
T 1whc_A           10 LTALESLIEM-GFPRGRAEKALALTGNQGIEAAMDWLMEHE   49 (64)
T ss_dssp             CCHHHHHHTT-TCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhcCCCHHHHHHHHHhCC
Confidence            4579999996 99999999999999 799999999998764

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=90.93  E-value=0.12  Score=38.82  Aligned_cols=65  Identities=6%  Similarity=0.087  Sum_probs=51.0

Q ss_pred             HHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhh-cccccccccHHHHHHHhHHc
Q 026176           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHM-KAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l-~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .+.++|..|-......|+.+-+.+++..+|+.|....+-.+...+ ....-|.|+.+||+..+...
T Consensus         5 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~   70 (148)
T 1m45_A            5 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVN   70 (148)
T ss_dssp             CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHH
Confidence            456678888654456899999999999999999877776777777 77778999999999998775

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=90.84  E-value=0.66  Score=33.42  Aligned_cols=66  Identities=6%  Similarity=0.057  Sum_probs=49.8

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..+.+.+.|+.|-.+....|..+-+..++..+|++.+++.-  +-..+....-|.|+.+||+..|..+
T Consensus         8 ~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~--i~~~~D~d~dG~i~~~EF~~~~~~~   73 (95)
T 1c07_A            8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAH--IWSLCDTKDCGKLSKDQFALAFHLI   73 (95)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHH--HHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHH--HHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            35788899999964445689999999999999976544333  3334566677999999999998663

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=90.79  E-value=1.4  Score=33.42  Aligned_cols=67  Identities=10%  Similarity=0.047  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHhcC-CCC-CccChHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKD-PYL-DMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d-~~~-d~I~~dG~~~~~~D-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...|.+.|..|-+ +.. ..|..+-+..++..     ||..+.+-.+--+...+....-|.|+-+||+..|...
T Consensus        21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~   94 (113)
T 2lnk_A           21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   94 (113)
T ss_dssp             HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence            4678889999962 223 38999999999976     7777765555556666777788999999999988763

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=90.72  E-value=0.73  Score=33.73  Aligned_cols=66  Identities=14%  Similarity=0.047  Sum_probs=49.9

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ....+.++|+.+-.+....|+.+-+.+++..+|++.+.  +--+-..+....-|.|+++||+..|+.+
T Consensus         9 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~--l~~i~~~~D~d~dG~i~~~EF~~~~~~~   74 (99)
T 1qjt_A            9 GNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLI--LGKIWDLADTDGKGVLSKQEFFVALRLV   74 (99)
T ss_dssp             TCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHH--HHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHH--HHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            35788999999954445689999999999999976433  2333344566778999999999998764

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=90.70  E-value=0.61  Score=33.33  Aligned_cols=65  Identities=5%  Similarity=-0.004  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.+.|+.|-......|+.+-+..++..+|++.+++.-  +-..+....-|.|+.+||+..|..+
T Consensus         8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~--i~~~~D~d~dG~i~~~EF~~~~~~~   72 (92)
T 1fi6_A            8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSH--IWELSDFDKDGALTLDEFCAAFHLV   72 (92)
T ss_dssp             HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHH--HHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHH--HHHHHCCCCCCCCCHHHHHHHHHHH
Confidence            4667788888854445689999999999999976554433  2334566677999999999998764

>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A

Probab=90.61  E-value=0.34  Score=32.52  Aligned_cols=34  Identities=18%  Similarity=0.214  Sum_probs=30.6

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhh
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDV   43 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~   43 (242)
                      .+.|++.|++ |-|.+.|++.|..+++|++.|.+-
T Consensus        12 ~~~Ia~Lm~m-GFsr~~ai~AL~~a~nnve~Aani   45 (52)
T 2ooa_A           12 DAKIAKLMGE-GYAFEEVKRALEIAQNNVEVARSI   45 (52)
T ss_dssp             HHHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHH
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHH
Confidence            3789999986 999999999999999999999864

>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.58  E-value=0.21  Score=35.73  Aligned_cols=40  Identities=20%  Similarity=0.191  Sum_probs=35.4

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCC-CCchhhhhhhcccc
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASD-WHLEGAFDVFYSQP   48 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~-w~le~A~~~ff~~~   48 (242)
                      ..++|++.+++ |-++..|++.|..++ |++|.|++-.|++.
T Consensus         9 ~e~~v~~L~~M-GF~~~~a~~AL~~t~n~~ve~A~ewL~~~~   49 (74)
T 2dag_A            9 DESVIIQLVEM-GFPMDACRKAVYYTGNSGAEAAMNWVMSHM   49 (74)
T ss_dssp             CHHHHHHHHHH-SCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence            46789999996 999999999999998 58999999998753

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=90.57  E-value=2.1  Score=33.37  Aligned_cols=111  Identities=11%  Similarity=0.047  Sum_probs=76.1

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhC-----CCCch-----hhhhhhccccCCCCcCCHHHHHHHHHHhcCCCCCccCh
Q 026176            7 SNRDKLQQFVSITGASEKAALQALKAS-----DWHLE-----GAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILV   76 (242)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~-----~w~le-----~A~~~ff~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~   76 (242)
                      -+++.++++...|+.+++.-..+.+..     +..|.     .++...+.     .......+.++|..+-......|+.
T Consensus         8 l~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~-----~~~~~~~~~~~f~~~D~d~~g~i~~   82 (190)
T 1g8i_A            8 LKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFP-----FGDPTKFATFVFNVFDENKDGRIEF   82 (190)
T ss_dssp             CCHHHHHHHHHTSSSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCT-----TSCTHHHHHHHHHHHCTTCSSEEEH
T ss_pred             CCHHHHHHHHHccCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCC-----CCChHHHHHHHHHHHhcCCCCeEeH
Confidence            356778999999999987766655543     22221     22222211     1124567899999997555568999


Q ss_pred             HHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           77 DGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        77 dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      +-+..++..++..+..-.+-.+-..+....-|.|+++||...+..+
T Consensus        83 ~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~  128 (190)
T 1g8i_A           83 SEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAI  128 (190)
T ss_dssp             HHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHH
Confidence            9999999888776644444445556677778999999999998873

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=90.53  E-value=0.76  Score=35.64  Aligned_cols=67  Identities=12%  Similarity=0.101  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|..|-......|+.+-+...+..+|..+.+-.+-.+...+....-|.|+.+||+..|...
T Consensus        49 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~  115 (150)
T 2jjz_A           49 LTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK  115 (150)
T ss_dssp             HHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS
T ss_pred             HHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence            4778888988854444689999999999999998876666666666677778999999999988764

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=90.48  E-value=0.65  Score=34.43  Aligned_cols=82  Identities=12%  Similarity=0.090  Sum_probs=40.9

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHH-HhhcccccccccHHHHHHHhHHcCCC-CHHHHHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVS-WHMKAATMCEFSKQEFIGGLQSLGID-SLDKFRER  133 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa-~~l~a~~~g~~tr~eF~~g~~~l~~d-si~~lk~~  133 (242)
                      ...+..+|..|-......|+.+-...++...--.+.....+.-+ ..+-...-|.|+++||...++.+|.. |.+.++..
T Consensus        41 ~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~  120 (142)
T 2bl0_C           41 PAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEF  120 (142)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHH
Confidence            45566666666443334566666666665422222222222222 23344455666666666666666543 34444444


Q ss_pred             HHHH
Q 026176          134 ISFM  137 (242)
Q Consensus       134 l~~l  137 (242)
                      +..+
T Consensus       121 ~~~~  124 (142)
T 2bl0_C          121 LGIT  124 (142)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            4443

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=90.46  E-value=0.66  Score=35.96  Aligned_cols=67  Identities=10%  Similarity=0.085  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|..|-.+....|+.+-+.+.+..+|..+.+-.+-.+...+....-|.|+.+||+..|...
T Consensus        47 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~  113 (147)
T 1wy9_A           47 LEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK  113 (147)
T ss_dssp             HHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence            4667888888854444689999999999999998877666666667777778999999999988653

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=90.40  E-value=1.6  Score=33.82  Aligned_cols=64  Identities=8%  Similarity=0.086  Sum_probs=39.2

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.++|..|-.+....|+.+-+.+.+..+|..+.+-.+-.+...+. ..-|.|+.+||+..+..
T Consensus        77 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~  140 (173)
T 1alv_A           77 KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR  140 (173)
T ss_dssp             HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence            44566676665433456777777777777777665433333333344 55577777777777665

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=90.32  E-value=0.45  Score=38.14  Aligned_cols=69  Identities=13%  Similarity=0.064  Sum_probs=57.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ....+.++|..+-......|+.+-+.+.+..+|+.+.+..+-.+...+....-|.|+.+||+..+..+.
T Consensus         8 ~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~   76 (188)
T 1s6i_A            8 EIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLN   76 (188)
T ss_dssp             TTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSS
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHh
Confidence            346788999998644456899999999999999999877777777788888889999999999887653

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=90.27  E-value=0.38  Score=36.48  Aligned_cols=105  Identities=12%  Similarity=0.103  Sum_probs=48.8

Q ss_pred             CCCcchHHHHHH-HHhh-----hC-CCHHHHHHHHHhCCCCchhhhhhhccccCCCCcCCHHHHHHHHHHhcCCCCCccC
Q 026176            3 KLSRSNRDKLQQ-FVSI-----TG-ASEKAALQALKASDWHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMIL   75 (242)
Q Consensus         3 ~l~~~q~~~i~~-F~~~-----T~-~s~~~A~~~L~~~~w~le~A~~~ff~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~   75 (242)
                      .+++.+.+.+++ |..+     .| .+...-..+|+..+.++                 +...+.++|..+-......|+
T Consensus        11 ~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~-----------------~~~~~~~~~~~~D~~~~g~i~   73 (161)
T 1dtl_A           11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNP-----------------TPEELQEMIDEVDEDGSGTVD   73 (161)
T ss_dssp             GSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCC-----------------CHHHHHHHHHHHCTTSSSSBC
T ss_pred             hCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCC-----------------CHHHHHHHHHHhCCCCCCeEc
Confidence            355555555543 3332     22 35566666666554322                 344555555555544444555


Q ss_pred             hHHHHHHHHHcCC---CCCchHHHHHHH-hhcccccccccHHHHHHHhHHcCC
Q 026176           76 VDGITLLCNDLQV---DPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGI  124 (242)
Q Consensus        76 ~dG~~~~~~DLgv---~~ed~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~~  124 (242)
                      .+-...++..+.-   .+.....+.-++ .+-...-|.|+++||...++.+|.
T Consensus        74 ~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~  126 (161)
T 1dtl_A           74 FDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGE  126 (161)
T ss_dssp             HHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--
T ss_pred             HHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC
Confidence            5555555544432   222222222222 233444556666666666555553

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=90.25  E-value=0.93  Score=33.81  Aligned_cols=65  Identities=8%  Similarity=0.062  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|+.|-.+....|+.+-+.+++...+++.+++  --+...+....-|.|+.+||+..|..+
T Consensus        13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~--~~i~~~~D~d~dG~I~~~EF~~~~~~~   77 (111)
T 2kgr_A           13 RLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQL--ASIWNLSDIDQDGKLTAEEFILAMHLI   77 (111)
T ss_dssp             HHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHHHH--HHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHHHH--HHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            47788899999544456899999999998544443333  333445666778999999999988764

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=90.24  E-value=2  Score=33.02  Aligned_cols=63  Identities=3%  Similarity=0.015  Sum_probs=36.5

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.++|..|-.+....|..+-+.+++..+|..+.+-.+-.+...+  ..-|.|+.+||+..+..
T Consensus        72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~  134 (167)
T 1gjy_A           72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVK  134 (167)
T ss_dssp             HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHH
Confidence            4556666666433344677777777777777655433333333333  44567777777776655

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=90.23  E-value=0.7  Score=34.26  Aligned_cols=64  Identities=9%  Similarity=0.045  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ...+.+.|..|-.+....|+.+-+.+++..+|..+.+-.+-.+...+.. .-|.|+.+||+.-|.
T Consensus        75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~  138 (140)
T 1ggw_A           75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL  138 (140)
T ss_dssp             HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence            3677778877754444578888888888888776655555555555555 667888888877664

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=90.22  E-value=0.81  Score=35.74  Aligned_cols=67  Identities=7%  Similarity=0.019  Sum_probs=53.8

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHc-----------CCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-----------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL-----------gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ....+.++|+.|-.+....|+.+-+...+..+           |..+.+..+-.+...+....-|.|+.+||+..+..
T Consensus        38 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~  115 (191)
T 3khe_A           38 ETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMD  115 (191)
T ss_dssp             TTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            45889999999954445689999999999887           66666666666667777788899999999998754

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=90.21  E-value=4.2  Score=31.47  Aligned_cols=118  Identities=11%  Similarity=0.072  Sum_probs=73.0

Q ss_pred             CCCcchHHHHHH-HHhh----hCC-CHHHHHHHHHhCCCCchhhh-hhhcccc---------------CCCCcCCHHHHH
Q 026176            3 KLSRSNRDKLQQ-FVSI----TGA-SEKAALQALKASDWHLEGAF-DVFYSQP---------------QSKSLTDTRHLE   60 (242)
Q Consensus         3 ~l~~~q~~~i~~-F~~~----T~~-s~~~A~~~L~~~~w~le~A~-~~ff~~~---------------~~~~~~~~~~l~   60 (242)
                      +||..|.+.+++ |..+    .|. +...-...|++.+.++..+. ..+....               ..........|.
T Consensus         9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~   88 (153)
T 3i5g_B            9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDALR   88 (153)
T ss_dssp             TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHHhccCCccHHHHHHHHHhhhcccccHHHHH
Confidence            467666665553 4333    232 56666667777666544332 2222111               111223457899


Q ss_pred             HHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        61 ~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      +.|..|=......|..+-+.+.+..+|....+-.+=-+.-.+... =|.|+-+||++-|++
T Consensus        89 ~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~  148 (153)
T 3i5g_B           89 NAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGK  148 (153)
T ss_dssp             HHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHC
T ss_pred             HHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcC
Confidence            999999554556999999999999999877554443333334433 589999999998865

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=90.17  E-value=4  Score=33.50  Aligned_cols=70  Identities=11%  Similarity=0.131  Sum_probs=53.2

Q ss_pred             CCHHHHHHHHHHhcCC-CCCccChHHHHHHHHHcCCC-CCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~~DLgv~-~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      .+...+.++|+.|... ....|+.+-+.+++..+|.. +....+-.+...+....-|.|+.+||+..+..++
T Consensus        48 ~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~  119 (224)
T 1s1e_A           48 FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILL  119 (224)
T ss_dssp             CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHc
Confidence            4567777777777642 34589999999999999865 4444555566667778889999999999998765

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=90.11  E-value=0.94  Score=35.27  Aligned_cols=62  Identities=6%  Similarity=-0.061  Sum_probs=46.3

Q ss_pred             HHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        61 ~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ++|..|-.+....|+.+-+.+++..+|..+.+-.+-.+...+....=|.|+.+||+..|...
T Consensus       113 ~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~~  174 (191)
T 1uhk_A          113 ALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGF  174 (191)
T ss_dssp             HHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            77887754444588888888888888887766555556666666667889999998888764

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=90.11  E-value=0.83  Score=34.27  Aligned_cols=67  Identities=6%  Similarity=0.009  Sum_probs=52.6

Q ss_pred             CCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .....+.+.|+.+-......|..+-+...+..+|++.+++.-++  ..+....-|.|+.+||+..|..+
T Consensus        19 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i~--~~~D~d~dG~I~~~EF~~~m~~~   85 (110)
T 1iq3_A           19 EQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIW--ELSDADCDGALTLPEFCAAFHLI   85 (110)
T ss_dssp             SSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHH--HHHCSSSCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHHH--HHHcCCCCCcCcHHHHHHHHHHH
Confidence            34688999999996444568999999999999998877655533  34566678999999999998764

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=90.09  E-value=1.8  Score=34.44  Aligned_cols=65  Identities=9%  Similarity=0.003  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (242)
                      ...|.++|+.|-.+....|+.+-+.++ ..+|++|.   +-.+...+....-|.|+.+||+..+.....
T Consensus        28 ~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~   92 (202)
T 2bec_A           28 LLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRP   92 (202)
T ss_dssp             HHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSC
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcc
Confidence            356777898885444458999999888 89999887   444455667777899999999999987653

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=90.04  E-value=2.6  Score=31.75  Aligned_cols=77  Identities=13%  Similarity=0.172  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC--CCCHHHHHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG--IDSLDKFRER  133 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~--~dsi~~lk~~  133 (242)
                      ...+.++|..|-......|+.+-+.+.+..+|+.+....+-.+.   . ..-|.|+.+||+..+....  ..+.+.++..
T Consensus        17 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~-~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~   92 (156)
T 1wdc_B           17 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML---K-EAPGPLNFTMFLSIFSDKLSGTDSEETIRNA   92 (156)
T ss_dssp             HHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH---T-TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH---H-hCCCcCcHHHHHHHHHHHhcCCChHHHHHHH
Confidence            46788899998654456899999999999999998755443333   2 3468999999999998642  2334444444


Q ss_pred             HHH
Q 026176          134 ISF  136 (242)
Q Consensus       134 l~~  136 (242)
                      ...
T Consensus        93 F~~   95 (156)
T 1wdc_B           93 FAM   95 (156)
T ss_dssp             HHT
T ss_pred             HHH
Confidence            433

>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4

Probab=90.02  E-value=0.55  Score=31.04  Aligned_cols=41  Identities=12%  Similarity=0.196  Sum_probs=34.7

Q ss_pred             chHHHHHHHHhh-hCCCHHHHHHHHHhCCCCchhhhhhhccc
Q 026176            7 SNRDKLQQFVSI-TGASEKAALQALKASDWHLEGAFDVFYSQ   47 (242)
Q Consensus         7 ~q~~~i~~F~~~-T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (242)
                      +..+.++..+++ =+++..++++.|+++++|++.|++.-.+-
T Consensus         3 ~~e~~v~~L~EMFP~~~~~~ik~~L~~~~Gd~d~Ai~~LL~~   44 (49)
T 1otr_A            3 DHESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKE   44 (49)
T ss_dssp             SHHHHHHHHHHHCSSSCHHHHHHHHHHTTTCSHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            345778888888 67889999999999999999999987643

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=89.93  E-value=1.1  Score=33.38  Aligned_cols=67  Identities=10%  Similarity=0.073  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHhc--CCCCCccChHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYK--DPYLDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~--d~~~d~I~~dG~~~~~~D-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...|.+.|..|-  +.+.+.|..+-+.+++..     ||-.+.+-.+=-+-..+....=|.|+-+||+.-+..+
T Consensus         9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~   82 (101)
T 3nso_A            9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL   82 (101)
T ss_dssp             HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            367888999995  333369999999999985     4666666555556666677778999999999887764

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=89.93  E-value=0.92  Score=36.18  Aligned_cols=68  Identities=12%  Similarity=0.032  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHc-CCCCCchHHHHHHHh----hcccccccccHHHHHHHhHHcC
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-QVDPQDIVMLVVSWH----MKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL-gv~~ed~~~LvLa~~----l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ...+..+|..|-.+....|+.+-+.+++..+ |..+.+-.+-.+...    +....-|.|+.+||+..+...+
T Consensus       113 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~  185 (202)
T 2bec_A          113 RNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMD  185 (202)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTSC
T ss_pred             HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHhC
Confidence            4678889999865445689999999999999 977655444444444    6677789999999999887764

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=89.90  E-value=0.89  Score=32.13  Aligned_cols=67  Identities=13%  Similarity=0.124  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHhc-CCCCC-ccChHHHHHHHH-HcC----CCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYK-DPYLD-MILVDGITLLCN-DLQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~-d~~~d-~I~~dG~~~~~~-DLg----v~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|..|- ..... .|+.+-+.+++. .+|    ..+....+--+...+....-|.|+.+||+..+..+
T Consensus        12 ~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~   85 (99)
T 1qls_A           12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   85 (99)
T ss_dssp             HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            357889999996 33345 899999999998 453    55555555555566677778999999999988764

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=89.85  E-value=1.7  Score=32.60  Aligned_cols=22  Identities=18%  Similarity=0.066  Sum_probs=11.6

Q ss_pred             cccccccccHHHHHHHhHHcCC
Q 026176          103 KAATMCEFSKQEFIGGLQSLGI  124 (242)
Q Consensus       103 ~a~~~g~~tr~eF~~g~~~l~~  124 (242)
                      -...-|.|+++||...++.+|.
T Consensus        93 D~d~~G~I~~~el~~~l~~~g~  114 (148)
T 1exr_A           93 DRDGNGLISAAELRHVMTNLGE  114 (148)
T ss_dssp             STTCSSCBCHHHHHHHHHHTTC
T ss_pred             CCCCCCcCCHHHHHHHHHHhCC
Confidence            3344455555555555555553

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=89.74  E-value=5.8  Score=30.68  Aligned_cols=85  Identities=8%  Similarity=-0.004  Sum_probs=59.3

Q ss_pred             cCCHHHHHHHHHHhcCC-CCCccChHHHHHHHHHcCCC-CCchHHHHHHHhhcccccccccHHHHHHHhHHcCCC-CHHH
Q 026176           53 LTDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQVD-PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID-SLDK  129 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~~DLgv~-~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d-si~~  129 (242)
                      ..+...+.++|+.|... ....|+.+-+..++..+|.. ..+..+-.+...+....-|.|+.+||+..+..++.. +.+.
T Consensus        21 ~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~  100 (190)
T 1fpw_A           21 YFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEK  100 (190)
T ss_dssp             CSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHHH
Confidence            34667888888877532 34589999999999998653 233334445556667778999999999999988754 3445


Q ss_pred             HHHHHHHH
Q 026176          130 FRERISFM  137 (242)
Q Consensus       130 lk~~l~~l  137 (242)
                      ++.....+
T Consensus       101 ~~~~f~~~  108 (190)
T 1fpw_A          101 LSWAFELY  108 (190)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            55555444

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=89.73  E-value=1.2  Score=34.06  Aligned_cols=65  Identities=12%  Similarity=0.003  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+..+|..|-.+....|..+-+.+++..+|++++.+..+  ...+....-|.|+.+||+..|...
T Consensus        93 ~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~--~~~~D~d~dg~i~~~ef~~~~~~~  157 (174)
T 1q80_A           93 EGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPAS--FDAIDTNNDGLLSLEEFVIAGSDF  157 (174)
T ss_dssp             HTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHH--HHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHH--HHHhCCCCCceEeHHHHHHHHHHH
Confidence            36788899988654456899999999999999877654433  334566677999999999988653

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=89.69  E-value=0.96  Score=35.41  Aligned_cols=62  Identities=8%  Similarity=0.053  Sum_probs=44.2

Q ss_pred             HHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        61 ~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ++|..|-.+....|..+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..+
T Consensus       117 ~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  178 (195)
T 1qv0_A          117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGF  178 (195)
T ss_dssp             HHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence            67777754444588888888888888887766555556666666677888888888888764

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=89.69  E-value=1.7  Score=31.49  Aligned_cols=67  Identities=10%  Similarity=0.066  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHhcCCC--CCccChHHHHHHHHH-cC----CCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPY--LDMILVDGITLLCND-LQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~--~d~I~~dG~~~~~~D-Lg----v~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...|.+.|.+|.+.+  ++.|..+-+.+++.. +|    -.+.+-.+=-+-..+....=|.|+-+||+..+..+
T Consensus         9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~   82 (93)
T 4eto_A            9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   82 (93)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            367888999995322  359999999999984 76    23344444445555667778999999999988764

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=89.57  E-value=6.5  Score=31.96  Aligned_cols=68  Identities=10%  Similarity=0.109  Sum_probs=51.9

Q ss_pred             CCHHHHHHHHHHhcCCCCCccChHHHHHHHHHc----CCCCCchHHHH----HHHhhcccccccccHHHHHHHhHH
Q 026176           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVMLV----VSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL----gv~~ed~~~Lv----La~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .....+.++|..|-......|+.+-+.+++..+    |..+.+..+--    +...+....-|.|+.+||+..+..
T Consensus       100 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~  175 (263)
T 2f33_A          100 KSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPV  175 (263)
T ss_dssp             SCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCT
T ss_pred             cHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHH
Confidence            356788899988865445699999999999988    88876544432    455566677899999999998764

>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=89.57  E-value=0.48  Score=31.89  Aligned_cols=37  Identities=19%  Similarity=0.239  Sum_probs=32.2

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcc
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS   46 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~   46 (242)
                      ...|++.|++ |-+.+.|++.|..+++|+|.|.+---+
T Consensus        10 e~~I~~L~~l-GF~r~~ai~AL~~a~nnve~Aa~iL~e   46 (53)
T 2d9s_A           10 SSEIERLMSQ-GYSYQDIQKALVIAHNNIEMAKNILRE   46 (53)
T ss_dssp             HHHHHHHHHH-TCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHc-CCCHHHHHHHHHHhcCCHHHHHHHHHH
Confidence            4669999986 999999999999999999999886543

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=89.55  E-value=2.2  Score=33.25  Aligned_cols=77  Identities=9%  Similarity=0.026  Sum_probs=53.1

Q ss_pred             HHHHHHHHHhcC-----CC-C--CccChHHHHHHHHHcCCCCCchHHHHHHHhhccccccc-ccHHHHHHHhHHcCCCC-
Q 026176           57 RHLEELYNRYKD-----PY-L--DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCE-FSKQEFIGGLQSLGIDS-  126 (242)
Q Consensus        57 ~~l~~lFd~Y~d-----~~-~--d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~-~tr~eF~~g~~~l~~ds-  126 (242)
                      ..+.+.|.++-.     .. .  ..|+.+-+.. +..+|.+|..-.++   ..+....-|. |+.+||+..+..+.-.+ 
T Consensus        20 ~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~~l~---~~~D~d~~G~~I~~~EF~~~~~~~~~~~~   95 (183)
T 1dgu_A           20 LLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERIC---RVFSTSPAKDSLSFEDFLDLLSVFSDTAT   95 (183)
T ss_dssp             HHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHHHHH---HHHSCSSSSCCCCHHHHHHHHHHHSTTCC
T ss_pred             HHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHHHHH---HHhCCCCCCCEecHHHHHHHHHHhcCCCC
Confidence            456667777754     23 4  6899999999 99999998755433   3456667799 99999999998764322 


Q ss_pred             -HHHHHHHHHHH
Q 026176          127 -LDKFRERISFM  137 (242)
Q Consensus       127 -i~~lk~~l~~l  137 (242)
                       .+.++.....+
T Consensus        96 ~~~~l~~~F~~~  107 (183)
T 1dgu_A           96 PDIKSHYAFRIF  107 (183)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence             23455544444

>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=89.48  E-value=0.35  Score=35.36  Aligned_cols=40  Identities=25%  Similarity=0.267  Sum_probs=35.5

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCC-CCchhhhhhhcccc
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASD-WHLEGAFDVFYSQP   48 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~-w~le~A~~~ff~~~   48 (242)
                      ..++|++.+++ |-++..|++.|..++ ||++.|++-.|++.
T Consensus        29 ~e~~v~~L~~M-GF~~~~a~~AL~~t~n~n~e~A~ewL~~h~   69 (84)
T 1vek_A           29 NEEIVAQLVSM-GFSQLHCQKAAINTSNAGVEEAMNWLLSHM   69 (84)
T ss_dssp             CHHHHHHHHHH-TCCHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            46789999996 999999999999885 89999999998764

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=89.45  E-value=1.2  Score=33.74  Aligned_cols=65  Identities=8%  Similarity=0.078  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...+..+|..|-.+....|..+-+.+++..+|..+.+-.+-.+...+... -|.|+.+||+..|..
T Consensus        86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~  150 (156)
T 1wdc_B           86 EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG  150 (156)
T ss_dssp             HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhc
Confidence            35566666665433334566666666666666555444444444444444 566666666665554

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=89.45  E-value=1.5  Score=32.97  Aligned_cols=63  Identities=6%  Similarity=-0.041  Sum_probs=47.5

Q ss_pred             HHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .+..+|..|-.+....|+.+-+.+++..+|++.+++  -.+...+....-|.|+.+||+..+..+
T Consensus        99 ~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~~--~~~~~~~D~d~dg~i~~~ef~~~~~~~  161 (166)
T 3akb_A           99 FLHAALGVADTDGDGAVTVADTARALTAFGVPEDLA--RQAAAALDTDGDGKVGETEIVPAFARY  161 (166)
T ss_dssp             HHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHHH--HHHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHHH--HHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            388899888544456899999999999999444433  334445666778999999999988764

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=89.09  E-value=1.8  Score=33.11  Aligned_cols=63  Identities=2%  Similarity=-0.075  Sum_probs=33.4

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.++|..|-.+....|..+-+.+++..+|..+.+-.+-.+...+  ..-|.|+.+||+..+..
T Consensus        70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~  132 (165)
T 1k94_A           70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVK  132 (165)
T ss_dssp             HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence            4455566665433334666666666666666554332222222222  44566666666666654

>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}

Probab=89.08  E-value=0.43  Score=36.28  Aligned_cols=34  Identities=29%  Similarity=0.357  Sum_probs=30.7

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhh
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFD   42 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~   42 (242)
                      .+.|.-.|+-||+|.+.|++.|+.+++|+-.|+-
T Consensus        66 ~edi~lv~~q~~vs~~~A~~aL~~~~gDiv~Ai~   99 (102)
T 1tr8_A           66 EDDIELVMNQTGASREDATRALQETGGDLAEAIM   99 (102)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHH
Confidence            4568888999999999999999999999999874

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=88.62  E-value=3.5  Score=32.73  Aligned_cols=69  Identities=10%  Similarity=0.003  Sum_probs=56.2

Q ss_pred             CCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .....+..+|..+-.+....|+.+-...++..++..+..-.+-.+-..+....-|.|+++||...+..+
T Consensus        56 ~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~  124 (204)
T 1jba_A           56 EATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESI  124 (204)
T ss_dssp             TTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            456788999999975555689999999999999887765555555666777888999999999999876

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=88.51  E-value=2  Score=34.49  Aligned_cols=71  Identities=15%  Similarity=0.127  Sum_probs=54.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHc-CCCCCchHHHHH----HHhhcccccccccHHHHHHHhHHcCCC
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-QVDPQDIVMLVV----SWHMKAATMCEFSKQEFIGGLQSLGID  125 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL-gv~~ed~~~LvL----a~~l~a~~~g~~tr~eF~~g~~~l~~d  125 (242)
                      ....+..+|..|-.+....|+.+-+.+++..+ |..+.+-.+-.+    ...+....-|.|+.+||+..+...++.
T Consensus       111 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~  186 (208)
T 2ct9_A          111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDVE  186 (208)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTTSCGG
T ss_pred             HHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccChH
Confidence            45678889998865445699999999999987 977655444333    445666777999999999999887654

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=88.40  E-value=0.57  Score=34.02  Aligned_cols=66  Identities=8%  Similarity=0.129  Sum_probs=49.0

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~D-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...|.+.|..|-+.+. .|+.+-+..++..     ||..+.+-.+--+...+....-|.|+-+||+..|..+
T Consensus         8 ~~~l~~~F~~fD~~dg-~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~   78 (96)
T 1a4p_A            8 METMMFTFHKFAGDKG-YLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (96)
T ss_dssp             HHHHHHHHHHHHGGGC-SBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCC-eECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3568888998852223 8999999998875     6666655455555566777778999999999998764

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=88.36  E-value=2.5  Score=31.39  Aligned_cols=67  Identities=12%  Similarity=0.074  Sum_probs=49.6

Q ss_pred             HHHHHHHHHhcCCCC--CccChHHHHHHHHH-cC----CCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPYL--DMILVDGITLLCND-LQ----VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~~D-Lg----v~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..|.+.|..|-+.+.  ..|..+-+.+++.. ||    -.+.+-.+--+-..+....=|.|+-+||+..|..+-
T Consensus        13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~~   86 (104)
T 3zwh_A           13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSIA   86 (104)
T ss_dssp             HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            678889999963333  58999999999985 66    334444555555566777789999999999887753

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=88.15  E-value=2.1  Score=34.27  Aligned_cols=63  Identities=8%  Similarity=0.107  Sum_probs=47.9

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHc----CCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDL----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL----gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.+.|..|- +....|+.+-+.+.+..+    |..+.+-.+=.+...+. ..-|.|+.+||+.-|..
T Consensus        76 ~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~  142 (174)
T 2i7a_A           76 VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR  142 (174)
T ss_dssp             HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH
Confidence            56788898886 545689999999999999    88876555444445555 66789999999988765

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=87.59  E-value=3.3  Score=32.67  Aligned_cols=67  Identities=6%  Similarity=-0.039  Sum_probs=53.5

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..+..+|..+-......|+.+-+..++..++..+..-.+-.+-..+....-|.|+++||...+..++
T Consensus        52 ~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~  118 (198)
T 2r2i_A           52 KYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIR  118 (198)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence            4589999998655556899999999999998776544444555566777889999999999999875

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=87.56  E-value=1.6  Score=32.48  Aligned_cols=34  Identities=3%  Similarity=0.123  Sum_probs=15.4

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCC
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVD   89 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~   89 (242)
                      ...+.+.|..|-.+....|..+-+.+++..+|..
T Consensus        83 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~  116 (146)
T 2qac_A           83 VEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDA  116 (146)
T ss_dssp             HHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSC
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCC
Confidence            3444455554432222345555555555555543

>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}

Probab=87.30  E-value=0.54  Score=36.46  Aligned_cols=41  Identities=32%  Similarity=0.518  Sum_probs=36.8

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccccC
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (242)
                      ..+.|++.+++ |.++..|++.|..++||++.|++--|.++.
T Consensus        78 ~e~~v~~L~~M-GF~~~~a~~AL~~~~~~~e~A~e~L~~~~~  118 (126)
T 2lbc_A           78 PEEIVAIITSM-GFQRNQAIQALRATNNNLERALDWIFSHPE  118 (126)
T ss_dssp             CHHHHHHHHHH-TSCHHHHHHHHHHHTSCHHHHHHHHHTCCS
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            46789999996 999999999999999999999999887753

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=87.23  E-value=2  Score=33.35  Aligned_cols=82  Identities=7%  Similarity=-0.007  Sum_probs=44.4

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERI  134 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l  134 (242)
                      ....+..+|..+-......|+.+-...++.........-.+-.+-..+-...-|.|+++||...+.. ..-+.+.++..+
T Consensus        85 ~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~-~~~~~~~~~~~~  163 (191)
T 3khe_A           85 IEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGV-TEVDDETWHQVL  163 (191)
T ss_dssp             HHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTTS-SCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHcc-CCCCHHHHHHHH
Confidence            4566777777774433446777777666644433222223333334445556677777777777761 122444444444


Q ss_pred             HHH
Q 026176          135 SFM  137 (242)
Q Consensus       135 ~~l  137 (242)
                      ..+
T Consensus       164 ~~~  166 (191)
T 3khe_A          164 QEC  166 (191)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            444

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=87.23  E-value=1.9  Score=30.64  Aligned_cols=65  Identities=12%  Similarity=0.088  Sum_probs=47.3

Q ss_pred             HHHHHHHHHhc-CCCCC-ccChHHHHHHHHH---cC-CCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYK-DPYLD-MILVDGITLLCND---LQ-VDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~-d~~~d-~I~~dG~~~~~~D---Lg-v~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..|.+.|..|- ..... .|+.+-+.+++..   +| ++++.+.  .+...+....-|.|+.+||+..+..+.
T Consensus        10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~--~~~~~~D~d~dG~I~f~EF~~~~~~~~   80 (92)
T 2kax_A           10 TTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSID--DLMKSLDKNSDQEIDFKEYSVFLTMLC   80 (92)
T ss_dssp             HHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHH--HHHHHHTTTCSSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHH--HHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            57888999997 33345 8999999999986   44 3444433  344456677789999999999987653

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=87.13  E-value=7.7  Score=30.61  Aligned_cols=81  Identities=11%  Similarity=0.078  Sum_probs=53.5

Q ss_pred             HHHHHHHHHhcCC--CCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCC--CHHHHHH
Q 026176           57 RHLEELYNRYKDP--YLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID--SLDKFRE  132 (242)
Q Consensus        57 ~~l~~lFd~Y~d~--~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d--si~~lk~  132 (242)
                      ..+.++|+.+-..  ....|+.+-+...+.. +....+..+--+...+....-|.|+.+||+..+..++..  +.+.++.
T Consensus        37 ~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~  115 (207)
T 2ehb_A           37 EALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKF  115 (207)
T ss_dssp             HHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHH
T ss_pred             HHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHH
Confidence            4566677777544  4458888888887765 333444433336666777788999999999999887642  3444555


Q ss_pred             HHHHHH
Q 026176          133 RISFMR  138 (242)
Q Consensus       133 ~l~~l~  138 (242)
                      ....+.
T Consensus       116 ~F~~~D  121 (207)
T 2ehb_A          116 AFKLYD  121 (207)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            554443

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=87.12  E-value=1.1  Score=43.72  Aligned_cols=134  Identities=6%  Similarity=0.048  Sum_probs=42.3

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF  136 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~  136 (242)
                      ..|.+.|+.+-.+....|+.+-+.+++..||+++.+-.+--+...+....-|.|+.+||+.-+..+.-.  ++++.....
T Consensus        11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~~--~el~~aF~~   88 (624)
T 1djx_A           11 HWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQR--AEIDRAFEE   88 (624)
T ss_dssp             ---------------------------------------------------------CTTHHHHHHTCC--HHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhccH--HHHHHHHHH
Confidence            457778888754444589999999999999998765554444455566667999999999999886432  566666666


Q ss_pred             HHHHccchHH--HHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCC-----CCcccHHHHHHHHHhhc
Q 026176          137 MRAELKDEQK--FREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAE-----KQWPLVDHWCQFLQAKH  198 (242)
Q Consensus       137 l~~~l~~~~~--Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~-----~~~~~l~~W~~FL~~~~  198 (242)
                      +...   +..  +.++.+|.   ....|.+.+..+.+.++-+-+-+.     .+.=-++.|+.||....
T Consensus        89 fD~~---~G~Is~~EL~~fL---~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~~  151 (624)
T 1djx_A           89 AAGS---AETLSVERLVTFL---QHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD  151 (624)
T ss_dssp             HHTT---SSSEEHHHHHHHH---HHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHSTT
T ss_pred             hcCC---CCeecHHHHHHHH---HHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCcc
Confidence            5532   111  33333332   112233446777777777666543     12233667777776543

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=87.11  E-value=9.6  Score=30.04  Aligned_cols=81  Identities=10%  Similarity=0.108  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCC--CHHHHHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGID--SLDKFRER  133 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~d--si~~lk~~  133 (242)
                      -+.|.+.|+.|=.+....|+.+=+...+..||++|.+..+--+...+....-|.++-++|+..+......  +.++|+..
T Consensus        10 i~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~a   89 (176)
T 2lhi_A           10 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEA   89 (176)
T ss_dssp             GGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHH
Confidence            4678889999854445689999999999999999998888888888888889999999999988665433  23344444


Q ss_pred             HHH
Q 026176          134 ISF  136 (242)
Q Consensus       134 l~~  136 (242)
                      ...
T Consensus        90 F~~   92 (176)
T 2lhi_A           90 FKV   92 (176)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            433

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=86.98  E-value=0.57  Score=35.16  Aligned_cols=64  Identities=6%  Similarity=-0.022  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ...+.++|..|-.+....|..+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||+..|.
T Consensus        86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~  149 (151)
T 1w7j_B           86 YEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHIL  149 (151)
T ss_dssp             --CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence            355667888774333458999999999999997776655555555666 6778999999988764

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=86.82  E-value=4.9  Score=33.50  Aligned_cols=81  Identities=15%  Similarity=0.183  Sum_probs=56.8

Q ss_pred             CCHHHHHHHHHHhcCC-CCCccChHHHHHHHHHcCC-CCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCC-HHHH
Q 026176           54 TDTRHLEELYNRYKDP-YLDMILVDGITLLCNDLQV-DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS-LDKF  130 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~-~~d~I~~dG~~~~~~DLgv-~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ds-i~~l  130 (242)
                      .+...|..+|..|... ....|+.+-+..++..+|- .+.+..+-.+-..+....-|.|+.+||+..+..++... .+.+
T Consensus        88 ~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~l  167 (256)
T 2jul_A           88 FTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKL  167 (256)
T ss_dssp             SCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHHHHH
T ss_pred             CCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChHHHH
Confidence            4567888888888653 2458999999999999873 34444444555666777789999999999998876433 3334


Q ss_pred             HHHH
Q 026176          131 RERI  134 (242)
Q Consensus       131 k~~l  134 (242)
                      +...
T Consensus       168 ~~~F  171 (256)
T 2jul_A          168 KWAF  171 (256)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4333

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=86.54  E-value=3.6  Score=32.64  Aligned_cols=62  Identities=3%  Similarity=0.005  Sum_probs=29.5

Q ss_pred             HHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .+.++|..|-.+....|+.+-+.+++..+|..+.+-.+-.+...+  ..-|.|+.+||+..+..
T Consensus       104 ~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~  165 (198)
T 1juo_A          104 GWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVK  165 (198)
T ss_dssp             HHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence            444455554322233566666666666665544332222222222  33455666666655544

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=86.50  E-value=2.1  Score=32.83  Aligned_cols=65  Identities=9%  Similarity=0.140  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+..+|..|-.+....|+.+-+.+++..+|++++++..+.  ..+....-|.|+.+||+..+...
T Consensus       104 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~--~~~D~d~dG~i~~~ef~~~~~~~  168 (185)
T 2sas_A          104 QNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVY--NVITDGGKVTFDLNRYKELYYRL  168 (185)
T ss_dssp             HHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHH--HHHHTTTTSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHH--HHhcCCCCCcCcHHHHHHHHHHH
Confidence            367888888886544568999999999999998766654433  34455667899999999888763

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A

Probab=86.43  E-value=1.3  Score=34.50  Aligned_cols=64  Identities=11%  Similarity=0.167  Sum_probs=49.5

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHh-hcccccccccHHHHHHHhHHc
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWH-MKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~-l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..+++.++|+++. +....|+.+-+..++...|++.+++   -=.|. .....-|.++++||+.+|.-+
T Consensus        31 e~~~y~~iF~~lD-~~dG~Isg~elr~~~~~sgLp~~~L---~~Iw~laD~d~dG~Ld~~EF~~aM~Li   95 (121)
T 3fia_A           31 ERAKHDQQFHSLK-PISGFITGDQARNFFFQSGLPQPVL---AQIWALADMNNDGRMDQVEFSIAMKLI   95 (121)
T ss_dssp             HHHHHHHHHHHTC-CBTTBEEHHHHHHHHGGGCCCHHHH---HHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHcCCCHHHH---HHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence            4588999999995 4556899999999999999975543   22233 356677999999999998764

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=86.38  E-value=3.4  Score=33.90  Aligned_cols=87  Identities=10%  Similarity=0.043  Sum_probs=60.9

Q ss_pred             CcCCHHHHHHHHHHhcCCCCCccChHHHHHHHH----HcCC--CCCchHHHHHH----HhhcccccccccHHHHHHH---
Q 026176           52 SLTDTRHLEELYNRYKDPYLDMILVDGITLLCN----DLQV--DPQDIVMLVVS----WHMKAATMCEFSKQEFIGG---  118 (242)
Q Consensus        52 ~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~----DLgv--~~ed~~~LvLa----~~l~a~~~g~~tr~eF~~g---  118 (242)
                      +....+.|.++|+.|-......|+.+-+.+.+.    .||+  .|.+-.+--+.    ..+....-|.|+.+||+..   
T Consensus         6 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~   85 (272)
T 2be4_A            6 ANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILP   85 (272)
T ss_dssp             CCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSC
T ss_pred             HhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhh
Confidence            345678999999999654456899999999988    8999  76544333222    3455667799999999999   


Q ss_pred             --------hHHcC-CCCHHHHHHHHHHHH
Q 026176          119 --------LQSLG-IDSLDKFRERISFMR  138 (242)
Q Consensus       119 --------~~~l~-~dsi~~lk~~l~~l~  138 (242)
                              +...+ ..+.+.++.....+.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~l~~~F~~~D  114 (272)
T 2be4_A           86 QEENFLLIFRREAPLDNSVEFMKIWRKYD  114 (272)
T ss_dssp             HHHHHHHHHHHHSCCCCHHHHHHHHHHHC
T ss_pred             hhHHHHHHHhhccCcccHHHHHHHHHHhC
Confidence                    33433 345566666655554

>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*

Probab=85.92  E-value=0.42  Score=37.15  Aligned_cols=89  Identities=20%  Similarity=0.242  Sum_probs=58.6

Q ss_pred             CCCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccccC-CCCcCCHHHHHHHHHHhcCCCC-CccChHHH
Q 026176            2 HKLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ-SKSLTDTRHLEELYNRYKDPYL-DMILVDGI   79 (242)
Q Consensus         2 ~~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~-~~~~~~~~~l~~lFd~Y~d~~~-d~I~~dG~   79 (242)
                      +.|++.+++.|.+++++ |-++..|++.|.+++.|.+.|++--+.... ..+..+...++..++.+..... ....++.+
T Consensus         2 ~~l~~~e~~~v~~l~~M-GFp~~~~~kAl~~~g~~~e~amewL~~h~~L~d~~~d~~~~e~~l~~~~~~~~~~~~~~~~v   80 (118)
T 4ae4_A            2 SHMSPSERQCVETVVNM-GYSYECVLRAMKAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLM   80 (118)
T ss_dssp             CCSCHHHHHHHHHHHHT-TCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHc-CCCHHHHHHHHHHHCcCHHHHHHHHHHhchhcccCCChhhhHHHHHhccCCccccccCHHHH
Confidence            35899999999999986 999999999999999899999998886521 0022345566666766653211 11222222


Q ss_pred             HHHHHHcCCCCCc
Q 026176           80 TLLCNDLQVDPQD   92 (242)
Q Consensus        80 ~~~~~DLgv~~ed   92 (242)
                       .-+.++|++.+.
T Consensus        81 -~~L~eMGF~~~~   92 (118)
T 4ae4_A           81 -SKFKEMGFELKD   92 (118)
T ss_dssp             -HHHHHTTCCHHH
T ss_pred             -HHHHHcCCCHHH
Confidence             333456666543

>1vdl_A Ubiquitin carboxyl-terminal hydrolase 25; UBA domain, mouse cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.5.2.1

Probab=85.75  E-value=0.78  Score=33.06  Aligned_cols=41  Identities=32%  Similarity=0.314  Sum_probs=34.4

Q ss_pred             hHHHHHHHHhhhCCC-HHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            8 NRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         8 q~~~i~~F~~~T~~s-~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      +.-.++|..+|||+. +..-.+.|++++.||..|+.---+.+
T Consensus        24 ~q~lLnQLrEITGiqD~~~L~~ALkas~Gdl~~AV~~LT~~~   65 (80)
T 1vdl_A           24 QQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKN   65 (80)
T ss_dssp             HHHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHhCCCcHHHHHHHHHhccCCHHHHHHHHhccc
Confidence            344689999999997 67788999999999999998766554

>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=85.57  E-value=0.88  Score=30.73  Aligned_cols=39  Identities=8%  Similarity=0.156  Sum_probs=34.4

Q ss_pred             HHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176           10 DKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus        10 ~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      .+++++.++==+++..-++.|++++||++.||+.-.+.+
T Consensus        11 ~~L~~L~eMGF~D~~~N~~aL~~~~gnv~~aI~~Ll~~~   49 (54)
T 2cp8_A           11 ALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLS   49 (54)
T ss_dssp             HHHHHHHHHTCCCHHHHHHHHTTTTTCHHHHHHHHHHHS
T ss_pred             HHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence            368899998778999999999999999999999877654

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=85.47  E-value=1.2  Score=32.14  Aligned_cols=67  Identities=12%  Similarity=0.055  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHhcCCCC-C-ccChHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYL-D-MILVDGITLLCND-----LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~-d-~I~~dG~~~~~~D-----Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...|.+.|..|-+.+. . .|..+-+.+++..     ||..+.+-.+--+...+....-|.|+-+||+..|..+
T Consensus        11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~   84 (95)
T 2wcb_A           11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA   84 (95)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            3578889999962233 3 8999999999876     6766655555445555666678999999999988763

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=85.39  E-value=3.2  Score=33.06  Aligned_cols=62  Identities=10%  Similarity=0.124  Sum_probs=49.1

Q ss_pred             HHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        59 l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      +..+|..|-.+....|+.+-+.+++..+|++++++..  +...+....-|.|+.+||+..+...
T Consensus       130 ~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~--~~~~~D~d~dG~I~~~EF~~~~~~~  191 (208)
T 2hpk_A          130 SNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYT--FFEKADTDKSGKLERTELVHLFRKF  191 (208)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHH--HHHHHCTTCCSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHH--HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            7889999865555689999999999999976665544  3344566677999999999998775

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=85.29  E-value=3.4  Score=32.18  Aligned_cols=64  Identities=5%  Similarity=-0.014  Sum_probs=36.8

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..+.++|..|-.+....|+.+-+.+++..+|++++.+.  .+...+....-|.|+.+||+..++.+
T Consensus       109 ~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~--~~~~~~D~d~dG~i~~~Ef~~~~~~~  172 (191)
T 2ccm_A          109 KYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCD--AAFDTLSDGGKTMVTREIFARLWTEY  172 (191)
T ss_dssp             HHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHH--HHHHHHTTTTTSCCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHH--HHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence            44566666664433446777777777777774444332  22333444555677777777766553

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=85.18  E-value=1.2  Score=35.82  Aligned_cols=62  Identities=10%  Similarity=-0.062  Sum_probs=23.9

Q ss_pred             HHHHHHHHhcCCCCCccChHHHHHHHHHc--CCCCCchHHHHHHHhhcccccccccHHHHHHHh
Q 026176           58 HLEELYNRYKDPYLDMILVDGITLLCNDL--QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (242)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL--gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (242)
                      .+..+|+.|-.+....|..+-+.+++..+  |....+-.+-.+...+....-|.|+.+||+.-|
T Consensus       130 ~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l  193 (197)
T 3pm8_A          130 VCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM  193 (197)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence            44444444422222344444444444444  322222222223333333344444444444444

>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1

Probab=85.07  E-value=1.7  Score=30.51  Aligned_cols=41  Identities=22%  Similarity=0.154  Sum_probs=34.5

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccccC
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (242)
                      .+.|++.+++=-.++...++.|++++.|++.||+--|+++.
T Consensus        20 ~~ql~qL~~MGF~d~~an~~AL~at~Gnve~Ave~L~~~~~   60 (67)
T 2dna_A           20 SKEMECLQAMGFVNYNANLQALIATDGDTNAAIYKLKSSQG   60 (67)
T ss_dssp             HHHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHHHCCS
T ss_pred             HHHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence            45788888875566777799999999999999999998764

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=84.98  E-value=7.9  Score=30.11  Aligned_cols=79  Identities=5%  Similarity=-0.039  Sum_probs=38.4

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF  136 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~  136 (242)
                      ..+..+|..+-......|+.+-...++..+.-..+ -.+-.+-..+-...-|.|+++||...++..++ +.+.+...+..
T Consensus        73 ~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~-~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~-~~~~~~~~~~~  150 (180)
T 3mse_B           73 WDINRILQALDINDRGNITYTEFMAGCYRWKNIES-TFLKAAFNKIDKDEDGYISKSDIVSLVHDKVL-DNNDIDNFFLS  150 (180)
T ss_dssp             HHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC---CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSC-CHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCH-HHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCC-CHHHHHHHHHH
Confidence            55666666664333346666666665554332221 12222223344555567777777666663322 33444444444


Q ss_pred             H
Q 026176          137 M  137 (242)
Q Consensus       137 l  137 (242)
                      +
T Consensus       151 ~  151 (180)
T 3mse_B          151 V  151 (180)
T ss_dssp             H
T ss_pred             h
Confidence            3

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=84.88  E-value=1  Score=32.45  Aligned_cols=70  Identities=13%  Similarity=0.120  Sum_probs=46.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHH---HcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCN---DLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~---DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (242)
                      +...+..+|..+-....+.|+.+-...++.   ..+..+..-.+-.+-..+....-|.|+++||...+..+|.
T Consensus        34 ~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~  106 (134)
T 1jfj_A           34 NEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI  106 (134)
T ss_dssp             HHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTC
T ss_pred             CHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhCH
Confidence            456788888888654455788888888775   2333322222333344556667788999999988887764

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=84.81  E-value=1.3  Score=35.31  Aligned_cols=53  Identities=8%  Similarity=-0.013  Sum_probs=25.9

Q ss_pred             CCccChHHHHHHHHHcCC--CCCchHHHHHHHhhcccccccccHHHHHHHhH-HcCCC
Q 026176           71 LDMILVDGITLLCNDLQV--DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ-SLGID  125 (242)
Q Consensus        71 ~d~I~~dG~~~~~~DLgv--~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~-~l~~d  125 (242)
                      .+.|+.+....++..+.-  ..+.+..  +-..+-...-|.|+++|+...++ .+|..
T Consensus        76 ~~~i~~~ef~~~~~~~~~~~~~~~l~~--~F~~~D~d~dG~Is~~El~~~l~~~~g~~  131 (179)
T 3a8r_A           76 KQVLTKDELKDFYEQLTDQGFDNRLRT--FFDMVDKNADGRLTAEEVKEIIALSASAN  131 (179)
T ss_dssp             SSEECHHHHHHHHHHHHCCCHHHHHHH--HHHHHCTTCSSCBCHHHHHHHHHHHHHTT
T ss_pred             CCCcCHHHHHHHHHHHcCCCHHHHHHH--HHHHHCCCCCCcCCHHHHHHHHHHHhccc
Confidence            345666655555544421  1243221  12233445556666666666666 55543

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=84.80  E-value=5.5  Score=31.98  Aligned_cols=67  Identities=10%  Similarity=0.109  Sum_probs=52.9

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..+.++|..+-......|+.+-+..++..++..+..-.+-.+-..+-...-|.|+++||...+..++
T Consensus        57 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~  123 (211)
T 2ggz_A           57 KHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQ  123 (211)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence            4588999998655456899999999999988776544444455566777889999999999999875

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=84.71  E-value=2.6  Score=34.62  Aligned_cols=64  Identities=13%  Similarity=0.025  Sum_probs=50.4

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL---gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..+..+|..|-.+....|..+=+.+++..+   |+.++++.  .+...+....-|.|+.+||+.-|...
T Consensus       133 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~--~~~~~~D~d~dG~Is~~EF~~~~~~~  199 (226)
T 2lvv_A          133 FELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDAT--TVFNEIDTNGSGVVTFDEFSCWAVTK  199 (226)
T ss_dssp             HHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCH--HHHHHHCCSCSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHH--HHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence            378888999855445689999999999888   99998743  33445566677999999999988764

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=84.68  E-value=0.39  Score=34.53  Aligned_cols=65  Identities=11%  Similarity=0.058  Sum_probs=41.5

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL---gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ...+.++|+.|-.+....|+.+-+.+.+..+   |..+.+-.+-.+...+....-|.|+.+||+..|+
T Consensus        40 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           40 SSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             SSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence            3567777777743334578888887777777   6555433333344445556667888888887664

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=84.60  E-value=1.1  Score=34.18  Aligned_cols=21  Identities=10%  Similarity=0.123  Sum_probs=9.0

Q ss_pred             cccccccccHHHHHHHhHHcC
Q 026176          103 KAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus       103 ~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ....-|.|+++||...+..+|
T Consensus       109 D~d~~G~i~~~e~~~~l~~~~  129 (166)
T 2aao_A          109 DKDGSGYITPDELQQACEEFG  129 (166)
T ss_dssp             CTTCSSSBCHHHHHHHTCC--
T ss_pred             CCCCCCcCcHHHHHHHHHHcC
Confidence            333444555555555444444

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=84.59  E-value=1.6  Score=34.94  Aligned_cols=118  Identities=8%  Similarity=-0.004  Sum_probs=59.1

Q ss_pred             CCCcchHHHHHH-HHhh----hC-CCHHHHHHHHHhCCCCchhh-hhhhcccc---------------CCCCcCCHHHHH
Q 026176            3 KLSRSNRDKLQQ-FVSI----TG-ASEKAALQALKASDWHLEGA-FDVFYSQP---------------QSKSLTDTRHLE   60 (242)
Q Consensus         3 ~l~~~q~~~i~~-F~~~----T~-~s~~~A~~~L~~~~w~le~A-~~~ff~~~---------------~~~~~~~~~~l~   60 (242)
                      .++..+...+++ |..+    .| ++...-..+|...+.++... +...+..-               ..........+.
T Consensus        50 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~  129 (196)
T 3dtp_E           50 MFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIV  129 (196)
T ss_dssp             SSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTSSSCCBHHHHHHHHHHCCCSSCCHHHHH
T ss_pred             hCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCcHHHHHHHHHHHhcCCCcHHHHH
Confidence            356666665553 4333    12 35666677777665543221 11111110               001122345566


Q ss_pred             HHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           61 ELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        61 ~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .+|..|-.+....|+.+-+.+++ .+|....+-.+-.+.-.+....-|.|+.+||+..|..
T Consensus       130 ~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~  189 (196)
T 3dtp_E          130 NAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK  189 (196)
T ss_dssp             HHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSS
T ss_pred             HHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHc
Confidence            66666643333466666666666 6665554444444444444445566666666665543

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=84.23  E-value=3.1  Score=36.74  Aligned_cols=64  Identities=5%  Similarity=-0.105  Sum_probs=47.3

Q ss_pred             HHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHH-HHHhhcccccccccHHHHHHHhHHcC
Q 026176           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLV-VSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~Lv-La~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      .+...|..|-.+....|+.+-+..++  +|..+.+..+-. +...+....-|.|+.++|+..+....
T Consensus       189 ~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~  253 (323)
T 1ij5_A          189 ALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL  253 (323)
T ss_dssp             TSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH
Confidence            34456666654444589999999988  888876666655 66677777789999999999887653

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=83.91  E-value=3.1  Score=30.92  Aligned_cols=64  Identities=6%  Similarity=0.015  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+.++|+.+-. ....|..+-+...+..+|++.+++.-  +-.......-|.|+.+||+..|..+
T Consensus        14 ~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~--i~~~~D~d~dG~id~~EF~~~m~~~   77 (106)
T 1eh2_A           14 KAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGR--VWELSDIDHDGMLDRDEFAVAMFLV   77 (106)
T ss_dssp             HHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHH--HHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHH--HHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            4667788888865 55689999999999999976554333  3334566678999999999988764

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=83.91  E-value=4.3  Score=30.02  Aligned_cols=67  Identities=16%  Similarity=0.116  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHhcC-CCCC-ccChHHHHHHHH-HcCCC---C--CchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKD-PYLD-MILVDGITLLCN-DLQVD---P--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d-~~~d-~I~~dG~~~~~~-DLgv~---~--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...|.+.|..|-. .... .|..+=+.+++. .||..   |  ..-.+-.+...+....-|.|+.+||+..|..+
T Consensus        11 ~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   85 (113)
T 1xk4_C           11 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARL   85 (113)
T ss_dssp             HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence            3678889999974 4445 899999999998 88852   2  33344445556667778999999999988764

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=83.73  E-value=4.9  Score=29.40  Aligned_cols=80  Identities=13%  Similarity=0.015  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHhcCCC---CCccChHHHHHHHHHcC-CCCCc----hHHHHHHHhhcccccccccHHHHHHHhHHcCCCCH
Q 026176           56 TRHLEELYNRYKDPY---LDMILVDGITLLCNDLQ-VDPQD----IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSL  127 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~---~d~I~~dG~~~~~~DLg-v~~ed----~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi  127 (242)
                      ...|.+.|..|-..+   ...|..+-+..++..++ -.+.+    -.+=-+.-.+....=|.|+-+||+..|..+...--
T Consensus        10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~~~~~   89 (100)
T 3nxa_A           10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITGPIA   89 (100)
T ss_dssp             HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHHGGGH
T ss_pred             HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence            367888999996432   46999999999998644 33322    22333334455666799999999999988765555


Q ss_pred             HHHHHHHH
Q 026176          128 DKFRERIS  135 (242)
Q Consensus       128 ~~lk~~l~  135 (242)
                      ..++...+
T Consensus        90 ~~~~~~~~   97 (100)
T 3nxa_A           90 KLIHEQEQ   97 (100)
T ss_dssp             HHHHHHHH
T ss_pred             HHHhcccc
Confidence            55555443

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=83.64  E-value=4.5  Score=31.71  Aligned_cols=68  Identities=9%  Similarity=0.040  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHc-------CCCCCchHHHHHHHhhcc-cccccccHHHHHHHhHHcC
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL-------QVDPQDIVMLVVSWHMKA-ATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL-------gv~~ed~~~LvLa~~l~a-~~~g~~tr~eF~~g~~~l~  123 (242)
                      ...+.++|..|-.+....|+.+-+.+++..+       |....+-.+-.+...+.. ..-|.|+.+||+..+..++
T Consensus       108 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~  183 (204)
T 3e3r_A          108 EAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVS  183 (204)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcC
Confidence            3567888888854445688898888888744       444433333444445555 6678888888888777754

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=83.07  E-value=3.7  Score=33.49  Aligned_cols=66  Identities=9%  Similarity=0.048  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcC-------CCCCchHHHH--HHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQ-------VDPQDIVMLV--VSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLg-------v~~ed~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...+..+|..|-.+....|+.+-+.+++..+|       ++++++..++  +...+....=|.|+.+||+..+..
T Consensus       128 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  202 (214)
T 2l4h_A          128 DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  202 (214)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            34777888888544455788888888888775       3444444332  444455566688888888887764

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=82.28  E-value=4.7  Score=28.86  Aligned_cols=65  Identities=8%  Similarity=-0.017  Sum_probs=46.5

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHH-----cCCCCCch-----------HHHHHHHhhcccccccccHHHHHHHhH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCND-----LQVDPQDI-----------VMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~D-----Lgv~~ed~-----------~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ..+..+|..|=......|+.+=+..++..     +|..+.+.           .+--+...+....-|.|+.+||+..+.
T Consensus        20 ~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~   99 (103)
T 1snl_A           20 FNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ   99 (103)
T ss_dssp             CCHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred             CCHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence            45788899884433458999999998886     68776542           122344456667789999999999876


Q ss_pred             H
Q 026176          121 S  121 (242)
Q Consensus       121 ~  121 (242)
                      +
T Consensus       100 ~  100 (103)
T 1snl_A          100 R  100 (103)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=82.23  E-value=5.1  Score=29.71  Aligned_cols=64  Identities=11%  Similarity=0.051  Sum_probs=46.3

Q ss_pred             HHHHHHHHHhc-CCC-CCccChHHHHHHHHH-cCCC---CCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYK-DPY-LDMILVDGITLLCND-LQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~-d~~-~d~I~~dG~~~~~~D-Lgv~---~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..|.+.|..|- .+. ...|..+-+..++.. +|-.   ++.+.-  +...+....-|.|+-+||+..|...
T Consensus        22 ~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~--li~~~D~d~dG~Idf~EF~~~~~~~   91 (106)
T 2h2k_A           22 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDE--KMKSLDVNQDSELKFNEYWRLIGEL   91 (106)
T ss_dssp             HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHH--HHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHH--HHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            57888999996 233 348999999999975 7732   233433  3344566678999999999988764

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=82.18  E-value=1.6  Score=31.74  Aligned_cols=65  Identities=12%  Similarity=0.103  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHH-----cCC--CCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCND-----LQV--DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~D-----Lgv--~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...|.+.|..|-+. .+.|..+-+.+++..     ||.  .+.+-.+--+...+....-|.|+-+||+..|..
T Consensus         9 ~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~   80 (100)
T 1psr_A            9 IIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD   80 (100)
T ss_dssp             HHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            36788899999543 358999999999876     554  332222222334556677899999999998865

>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4

Probab=82.08  E-value=1.2  Score=30.40  Aligned_cols=41  Identities=10%  Similarity=0.169  Sum_probs=34.2

Q ss_pred             hHHHHHHHHhhh-CCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            8 NRDKLQQFVSIT-GASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         8 q~~~i~~F~~~T-~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ..+.|+++.++- +.+..+.+..|+++++|++.||+..++-.
T Consensus         9 ~ee~l~~L~emFP~ld~~~I~~vL~a~~gdvd~aI~~LL~m~   50 (59)
T 1wgl_A            9 SEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMG   50 (59)
T ss_dssp             CHHHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHHSS
T ss_pred             CHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHcCc
Confidence            356677777655 77899999999999999999999998653

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=82.07  E-value=11  Score=30.69  Aligned_cols=137  Identities=12%  Similarity=0.018  Sum_probs=78.2

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHH-HHHHcCCCCCchHHHHHHHhh---------cccccccccHHHHHHHhHHcCCC
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITL-LCNDLQVDPQDIVMLVVSWHM---------KAATMCEFSKQEFIGGLQSLGID  125 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~-~~~DLgv~~ed~~~LvLa~~l---------~a~~~g~~tr~eF~~g~~~l~~d  125 (242)
                      ...|.++|+.|-......|+.+-+.+ +...+|+.+....+-.+...+         ....-|.|+.+||+..+..+.  
T Consensus        50 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~--  127 (226)
T 2lvv_A           50 KSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLC--  127 (226)
T ss_dssp             HHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHH--
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHH--
Confidence            46788899988543445899999998 778889887433322222222         556678999999998533211  


Q ss_pred             CHHHHHHHHHHHHHHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhc--CCCCcccHHHHHHHHHhhcCCCCC
Q 026176          126 SLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLF--AEKQWPLVDHWCQFLQAKHNKAIS  203 (242)
Q Consensus       126 si~~lk~~l~~l~~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll--~~~~~~~l~~W~~FL~~~~~k~Is  203 (242)
                                .+.    +.    .-.+.+|...=..+.-.|+.+.-..+.+.+-  +.. -.-++..+.-+.......||
T Consensus       128 ----------~~~----~~----~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~-~~e~~~~~~~~D~d~dG~Is  188 (226)
T 2lvv_A          128 ----------YIY----DI----FELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVD-ITDATTVFNEIDTNGSGVVT  188 (226)
T ss_dssp             ----------HHH----HH----HHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCC-CCSCHHHHHHHCCSCSSCEE
T ss_pred             ----------hcc----CH----HHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCC-HHHHHHHHHHhCCCCCCcEe
Confidence                      000    01    1222333333223445677666666655441  211 12255555555445556788


Q ss_pred             HhhhHHHHHH
Q 026176          204 RDTWSQLLEF  213 (242)
Q Consensus       204 kD~W~~~l~F  213 (242)
                      .+.+..++.=
T Consensus       189 ~~EF~~~~~~  198 (226)
T 2lvv_A          189 FDEFSCWAVT  198 (226)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            8877665543

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=80.44  E-value=5.5  Score=32.70  Aligned_cols=66  Identities=15%  Similarity=0.089  Sum_probs=42.7

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHc------------CCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDL------------QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL------------gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...+..+|+.|-.+....|+.+-+.+++..+            |....+-.+-.+...+....-|.|+.+||++.+++
T Consensus       137 ~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~  214 (229)
T 3dd4_A          137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK  214 (229)
T ss_dssp             HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence            3567778887754444578888888888776            33333334444445566667788888888887774

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=80.39  E-value=5.3  Score=31.47  Aligned_cols=65  Identities=9%  Similarity=0.005  Sum_probs=50.1

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ....+.++|+.|- +....|..+=+...+..+|++.+++.-  +-.......-|.|+.+||+..|..+
T Consensus        49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl~~~el~~--I~~~~D~d~dG~Ld~~EF~~am~li  113 (139)
T 2jq6_A           49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKSKLPNTVLGK--IWKLADVDKDGLLDDEEFALANHLI  113 (139)
T ss_dssp             THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTCCHHHHHH--HHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCcCHHHHHH--HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            4688999999997 555689999999999999976554332  2234566678999999999988664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	242
d1v92a_	46	a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-	5e-09

>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 46

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: NSFL1 (p97 ATPase) cofactor p47, UBA-like domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.5 bits (116), Expect = 5e-09
 Identities = 15/42 (35%), Positives = 26/42 (61%)

Query: 4  LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY 45
          ++   +D L++FV++TGA E  A   L+++ W L+ A   FY
Sbjct: 1  MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFY 42

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	242
d1v92a_	46	NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {	99.51
d1oaia_	59	FG-binding, C-terminal domain of TAP {Human (Homo	98.03
d2g3qa1	43	Endocytic protein Ede1, YBL047C {Saccharomyces cer	97.28
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	96.38
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	96.3
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	96.23
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	96.23
d1xb2b1	56	Elongation factor Ts (EF-Ts), N-terminal domain {C	95.93
d1wj7a1	91	Ubiquitin-associated protein 2-like Ubap2l {Mouse	95.91
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	95.89
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	95.77
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	95.77
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	95.67
d1oqya1	41	DNA repair protein Hhr23a {Human (Homo sapiens) [T	95.58
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	95.52
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	95.32
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	95.3
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	95.21
d1aipc1	52	Elongation factor Ts (EF-Ts), N-terminal domain {T	95.21
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	95.08
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	94.81
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	94.67
d1efub3	54	Elongation factor Ts (EF-Ts), N-terminal domain {E	94.44
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	94.41
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	94.28
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	94.27
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	94.13
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	93.92
d1wgna_	63	Ubiquitin-associated protein 1, UBAP1 {Human (Homo	93.76
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	93.31
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	93.27
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	93.16
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	92.88
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	92.75
d1vg5a_	73	Rhomboid family protein At3g58460 {Thale cress (Ar	92.73
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	92.46
d1wiva_	73	Ubiquitin isopeptidase T {Thale cress (Arabidopsis	92.35
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	92.34
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	92.24
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	92.21
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	92.16
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	91.64
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	91.62
d1wjia_	63	Tudor domain containing protein 3, TDRD3 {Human (H	91.57
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	91.47
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	91.35
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	91.09
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	91.04
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	91.04
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	90.99
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	90.74
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	90.67
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	90.6
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	90.58
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	90.04
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	89.66
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	89.4
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	89.38
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	89.22
d1vdla_	80	Ubiquitin carboxyl-terminal hydrolase 25 {Mouse (M	89.06
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	88.97
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	88.04
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	88.01
d1olma1	75	Supernatant protein factor (SPF), N-terminal domai	87.9
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	87.89
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	87.8
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	87.71
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	87.43
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	87.42
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	87.42
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	87.17
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	87.08
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	86.53
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	86.33
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	86.24
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	86.15
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	86.0
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	85.82
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	85.56
d1b0na1	35	SinR repressor dimerisation domain {Bacillus subti	85.38
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	84.55
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	84.52
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	84.45
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	83.83
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	83.41
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	82.96
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	82.65
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	82.56
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	82.35
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	81.95
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	81.41
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	80.7
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	80.41
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	80.08

>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: NSFL1 (p97 ATPase) cofactor p47, UBA-like domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.51  E-value=5.2e-15  Score=97.26  Aligned_cols=45  Identities=33%  Similarity=0.620  Sum_probs=42.3

Q ss_pred             CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         4 l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ++++++++|.|||+|||+++++|++||+.++|||+.||+.||++.
T Consensus         1 ma~~~~~lI~qF~~iTg~~~~~A~~~Le~~~w~Le~Ai~~yfe~g   45 (46)
T d1v92a_           1 MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG   45 (46)
T ss_dssp             CTTHHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred             CCccHHHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999999999874

>d1oaia_ a.5.2.3 (A:) FG-binding, C-terminal domain of TAP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: FG-binding, C-terminal domain of TAP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.2e-06  Score=58.07  Aligned_cols=44  Identities=20%  Similarity=0.397  Sum_probs=41.6

Q ss_pred             CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcc
Q 026176            3 KLSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYS   46 (242)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~   46 (242)
                      -|++.|.++|..|+..||.+.+-+..||+.++||++.|+..|-+
T Consensus         2 ~ls~~Qq~mv~~~s~~T~mn~e~s~~cLe~~~Wd~~~A~~~F~~   45 (59)
T d1oaia_           2 TLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTH   45 (59)
T ss_dssp             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999964

>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Endocytic protein Ede1, YBL047C
species: Saccharomyces cerevisiae [TaxId: 4932]

Probab=97.28  E-value=0.00011  Score=45.92  Aligned_cols=39  Identities=23%  Similarity=0.467  Sum_probs=32.9

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccc
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQ   47 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~   47 (242)
                      ...+|++.+++ |-++++|+..|++++||++.|+|.-.++
T Consensus         4 k~~ai~eL~~M-GF~e~~A~~AL~k~~wnleaAtN~LLd~   42 (43)
T d2g3qa1           4 KSLAVEELSGM-GFTEEEAHNALEKCNWDLEAATNFLLDS   42 (43)
T ss_dssp             HHHHHHHHHTT-TSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred             HHHHHHHHHhc-CCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            34568888775 8899999999999999999999976553

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.38  E-value=0.0043  Score=41.21  Aligned_cols=65  Identities=6%  Similarity=0.091  Sum_probs=56.3

Q ss_pred             HHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .+.++|+.|=......|+.+-+...+..+|..+.+-.+-.+-..+....-|.|+.+||+..|+++
T Consensus         2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~~   66 (67)
T d1tiza_           2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEKM   66 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHTC
T ss_pred             hHHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence            36788999955455699999999999999999988888888888888888999999999998764

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=96.30  E-value=0.084  Score=38.63  Aligned_cols=136  Identities=11%  Similarity=0.056  Sum_probs=90.4

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF  136 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~  136 (242)
                      +.|.+.|+.|-......|..+-+..++..+|..+.+..+-.+.-.+.+..-|.++-++|+..+......           
T Consensus         9 ~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~-----------   77 (146)
T d1exra_           9 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKE-----------   77 (146)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHH-----------
T ss_pred             HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhc-----------
Confidence            568888999976666799999999999999999998888888888899999999999999887532110           


Q ss_pred             HHHHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhhcCCCCCHhhhHHHH
Q 026176          137 MRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLL  211 (242)
Q Consensus       137 l~~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~~~k~IskD~W~~~l  211 (242)
                      .        .-.+-++.+|...=..+...|+.+.-..+..-+-..-.-..++.+++.+...+...||.+.+..++
T Consensus        78 ~--------~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l  144 (146)
T d1exra_          78 Q--------DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM  144 (146)
T ss_dssp             H--------HHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHH
T ss_pred             c--------ChHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence            0        001112334443323345566666555554433222112457777777765555678877765543

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=96.23  E-value=0.03  Score=40.23  Aligned_cols=132  Identities=11%  Similarity=0.102  Sum_probs=89.9

Q ss_pred             HHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHHHH
Q 026176           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFMR  138 (242)
Q Consensus        59 l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~l~  138 (242)
                      .+++|+.+=......|+.+-+..++..+|..+.+-.+-.+-..+....-|.|+.+||+..+..........-+..     
T Consensus         2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~-----   76 (134)
T d1jfja_           2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIG-----   76 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHH-----
T ss_pred             HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhccccccccccccccccccccccccccccc-----
Confidence            467898887655569999999999999999997766666667778888899999999998876544333322211     


Q ss_pred             HHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhhcCCCCCHhhhHHHH
Q 026176          139 AELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLL  211 (242)
Q Consensus       139 ~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~~~k~IskD~W~~~l  211 (242)
                                  .+.+|...-..+...|+.+.-..+    +...+.+.+..++.-+...+...||.+.|..++
T Consensus        77 ------------~~~~F~~~D~~~~g~i~~~el~~~----~~~~~~~~~~~~~~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_          77 ------------LKVLYKLMDVDGDGKLTKEEVTSF----FKKHGIEKVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             ------------HHHHHHHHCCSSSSEEEHHHHHHH----HTTTTCHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             ------------ccccccccccccCCcccHHHHHHH----HHhcCcHHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence                        123444433344556776654433    333335567777777766666789988887654

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=96.23  E-value=0.012  Score=39.92  Aligned_cols=70  Identities=6%  Similarity=0.011  Sum_probs=60.9

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..+...|.++|..|=......|+.+-+.+.+..||+.+.+-.+--+...+....-|.|+-+||++-|+.+
T Consensus         5 ~~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~~   74 (75)
T d1jc2a_           5 GKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV   74 (75)
T ss_dssp             CCCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHTC
T ss_pred             CCcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence            3456889999999965556799999999999999999988888888888888889999999999998765

>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Cow (Bos taurus), mitochondrial [TaxId: 9913]

Probab=95.93  E-value=0.0041  Score=41.00  Aligned_cols=39  Identities=23%  Similarity=0.157  Sum_probs=35.6

Q ss_pred             cchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhh
Q 026176            6 RSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVF   44 (242)
Q Consensus         6 ~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~f   44 (242)
                      +...++|.+..+.||+.-..+...|+.+|||++.|++--
T Consensus         2 a~s~~lvk~LRe~Tga~~~dcKkAL~e~~gD~ekA~e~L   40 (56)
T d1xb2b1           2 ASSKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWL   40 (56)
T ss_dssp             HHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             cccHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence            456789999999999999999999999999999999754

>d1wj7a1 a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-like Ubap2l {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 2-like Ubap2l
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.91  E-value=0.0045  Score=44.51  Aligned_cols=42  Identities=21%  Similarity=0.376  Sum_probs=38.3

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccccC
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQ   49 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~   49 (242)
                      =+++|++.|++||+|+..|.-.|-.++.|++.||+.-++..+
T Consensus        32 i~~kVkql~e~T~rsede~~~ALhDcn~D~~~AIn~lLEg~~   73 (91)
T d1wj7a1          32 FEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNP   73 (91)
T ss_dssp             HHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHhcCCccHHHHHHHHHhcCC
Confidence            367899999999999999999999999999999999998653

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=95.89  E-value=0.077  Score=41.02  Aligned_cols=143  Identities=13%  Similarity=0.092  Sum_probs=95.3

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERI  134 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l  134 (242)
                      ..++|.++|+.+-......|..+=+.+.+..+|+.+.+..+-.|...+....-|.|+.++|+..+...     .+++.. 
T Consensus        16 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~~-----~~~~~~-   89 (182)
T d1y1xa_          16 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI-----LSMREG-   89 (182)
T ss_dssp             TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-----HHHHHH-
T ss_pred             cHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhccccccccccccccccccccccc-----cccccc-
Confidence            34789999999844345699999999999999999988888888888999999999999999877542     222222 


Q ss_pred             HHHHHHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCC---CcccHHHHHHHHHhhcCCCCCHhhhHHHH
Q 026176          135 SFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEK---QWPLVDHWCQFLQAKHNKAISRDTWSQLL  211 (242)
Q Consensus       135 ~~l~~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~---~~~~l~~W~~FL~~~~~k~IskD~W~~~l  211 (242)
                                  |+.       +- ..+...|+.+.   +++++-.-.   .-..++..+.-+...+...|+.|.+.++.
T Consensus        90 ------------F~~-------~D-~~~~g~I~~~e---l~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~  146 (182)
T d1y1xa_          90 ------------FRK-------RD-SSGDGRLDSNE---VRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELS  146 (182)
T ss_dssp             ------------HHH-------HC-TTSSSCBCHHH---HHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             ------------hhc-------cc-cccchhhhhHH---HHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHH
Confidence                        221       11 12344555543   455444322   12345666666655566789999988887


Q ss_pred             HHHHhhccccCCccc
Q 026176          212 EFARVRQWTLHYQTM  226 (242)
Q Consensus       212 ~F~~~~~~~l~~~de  226 (242)
                      -..+.+..-+..||.
T Consensus       147 ~~l~~~~~~F~~~D~  161 (182)
T d1y1xa_         147 IFVCRVRNVFAFYDR  161 (182)
T ss_dssp             HHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHhCC
Confidence            766555444444443

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.77  E-value=0.012  Score=39.91  Aligned_cols=68  Identities=10%  Similarity=0.089  Sum_probs=53.2

Q ss_pred             CHHHHHHHHHHhcCC--CCCccChHHHHHHHHHcCCCC--CchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           55 DTRHLEELYNRYKDP--YLDMILVDGITLLCNDLQVDP--QDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~--~~d~I~~dG~~~~~~DLgv~~--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ++..|.++|+.|...  +...|..+-+.+.+..||..+  ++..+--+...+....-|.|+-+||+.-|+++
T Consensus         3 s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~   74 (76)
T d1qx2a_           3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence            578899999999533  245899999999999998765  33344445566777788999999999988764

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=95.77  E-value=0.018  Score=39.48  Aligned_cols=69  Identities=7%  Similarity=0.080  Sum_probs=58.5

Q ss_pred             CCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .+...|.++|+.|=......|+.+-+.+.+..+|..+.+-.+-.+-..+....=|.|+-+||+..|+.+
T Consensus        12 ~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~~   80 (81)
T d1fi5a_          12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV   80 (81)
T ss_dssp             CCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSCC
T ss_pred             CCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhc
Confidence            356789999999976666799999999999999999977766667777788888999999999988754

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=95.67  E-value=0.028  Score=37.93  Aligned_cols=69  Identities=10%  Similarity=0.154  Sum_probs=59.2

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ....|.++|..|=......|+.+-+.+.+..+|..+.+..+-.+...+....-|.|+.+||++-|++.+
T Consensus         7 ~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~~   75 (77)
T d1oqpa_           7 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS   75 (77)
T ss_dssp             HHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHccC
Confidence            346799999999655566999999999999999999887777777788888889999999999998754

>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: DNA repair protein Hhr23a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.007  Score=37.31  Aligned_cols=38  Identities=21%  Similarity=0.236  Sum_probs=33.3

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhc
Q 026176            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFY   45 (242)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff   45 (242)
                      +-+++|++.++ .|-+++.|++.|++++||++.|++--|
T Consensus         3 ~~e~~i~~L~~-MGF~~~~a~~AL~~~~~N~e~A~~~Ll   40 (41)
T d1oqya1           3 EYETMLTEIMS-MGYERERVVAALRASYNNPHRAVEYLL   40 (41)
T ss_dssp             THHHHHHHHHT-TTCCSHHHHHHHHHSCSSTTHHHHTTT
T ss_pred             hHHHHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence            45678999998 589999999999999999999998543

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.52  E-value=0.018  Score=38.97  Aligned_cols=65  Identities=9%  Similarity=0.148  Sum_probs=56.0

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.+.|..|=......|+.+-+.+.+..+|+.|.+-.+--+...+....-|.|+.+||+..|.+
T Consensus        10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~   74 (77)
T d1f54a_          10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR   74 (77)
T ss_dssp             HHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred             HHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            56777899986555679999999999999999998888877888888888999999999998754

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=95.32  E-value=0.026  Score=37.78  Aligned_cols=65  Identities=11%  Similarity=0.129  Sum_probs=56.2

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.+.|+.|=......|..+-+.+.+..+|+.+.+-.+--+...+....-|.|+-+||+.-|.+
T Consensus         8 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~   72 (73)
T d2pq3a1           8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR   72 (73)
T ss_dssp             HHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            46677899987766679999999999999999998877777778888888999999999998764

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.30  E-value=0.031  Score=36.59  Aligned_cols=63  Identities=10%  Similarity=0.061  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGG  118 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g  118 (242)
                      ...|.+.|..|=......|..+-+.+.+..||..+.+-.+-.+...+....-|.|+-+||++-
T Consensus         2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~   64 (65)
T d1fw4a_           2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM   64 (65)
T ss_dssp             CHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence            367889999996555679999999999999999998888888888888888899999999974

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.31  Score=34.93  Aligned_cols=136  Identities=8%  Similarity=0.069  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERIS  135 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~  135 (242)
                      .+.|.++|+.|-....+.|..+-+..++...|..+....+.-+.-.+.....|.++.++|+..+....     .-+    
T Consensus         5 ~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~-----~~~----   75 (141)
T d2obha1           5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKM-----SEK----   75 (141)
T ss_dssp             HHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHH-----HHH----
T ss_pred             HHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHH-----hhh----
Confidence            35789999999444456999999999999999999988888888888888899999999998765421     000    


Q ss_pred             HHHHHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhhcCCCCCHhhhHHH
Q 026176          136 FMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQL  210 (242)
Q Consensus       136 ~l~~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~~~k~IskD~W~~~  210 (242)
                                .++.=++-+|...-..+.-.++.+.=..++.-+-..-.-.-+..+++.+...+...|+.+....+
T Consensus        76 ----------~~~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~  140 (141)
T d2obha1          76 ----------DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI  140 (141)
T ss_dssp             ----------HHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHH
T ss_pred             ----------ccHHHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHh
Confidence                      11112233444443445556666554555443321111234667777776666667777665543

>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Thermus thermophilus [TaxId: 274]

Probab=95.21  E-value=0.013  Score=37.99  Aligned_cols=37  Identities=22%  Similarity=0.384  Sum_probs=33.9

Q ss_pred             hHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhh
Q 026176            8 NRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVF   44 (242)
Q Consensus         8 q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~f   44 (242)
                      +-+.|++..+.||+.-..+...|+.+++|++.|++--
T Consensus         2 ~~elvK~LR~~Tga~~~dcKkAL~e~~gD~ekA~e~L   38 (52)
T d1aipc1           2 QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLL   38 (52)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence            4578999999999999999999999999999998754

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=95.08  E-value=0.04  Score=37.67  Aligned_cols=66  Identities=11%  Similarity=-0.031  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      -+.+.++|+.|=......|+.+=+.+.+..|| .|.+-.+--+.-.+....-|.|+.+||+..|+..
T Consensus         5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~   70 (81)
T d2opoa1           5 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   70 (81)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence            36788999999766667999999999999999 5666666677778888889999999999988763

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=94.81  E-value=0.23  Score=36.37  Aligned_cols=118  Identities=8%  Similarity=0.119  Sum_probs=73.9

Q ss_pred             CCcchHHHHHH-HHhh----hC-CCHHHHHHHHHhCCCCchh-hhhhhccccCC---------------CCcCCHHHHHH
Q 026176            4 LSRSNRDKLQQ-FVSI----TG-ASEKAALQALKASDWHLEG-AFDVFYSQPQS---------------KSLTDTRHLEE   61 (242)
Q Consensus         4 l~~~q~~~i~~-F~~~----T~-~s~~~A~~~L~~~~w~le~-A~~~ff~~~~~---------------~~~~~~~~l~~   61 (242)
                      |++.|-+.+++ |..+    +| ++...-...|+..+.++.. -+..++.+..+               ........|.+
T Consensus         1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~   80 (142)
T d1wdcb_           1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDSEETIRN   80 (142)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTTSSSCCCHHHHHHHHHHHTCSCCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHHhccCccccccccccccccccccchhhhHHH
Confidence            45555555554 3332    22 3566666777776666542 24555543211               12234577888


Q ss_pred             HHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           62 LYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        62 lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .|..|=......|+.+=+.+.|..+|..+.+-.+--+...+... -|.|+-+||++-|+.-
T Consensus        81 aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~~  140 (142)
T d1wdcb_          81 AFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS  140 (142)
T ss_dssp             HHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred             hhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhcC
Confidence            88888544456899999999999999877655444444555544 3899999999888753

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=94.67  E-value=0.078  Score=36.09  Aligned_cols=65  Identities=8%  Similarity=0.050  Sum_probs=54.7

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.+.|+.|=......|+.+=+.+.+..+|+.+.+-.+--+...+....-|.|+-++|+..|.+
T Consensus        14 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_          14 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            45667798886655679999999999999999998877777777777778899999999998864

>d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TS-N domain
domain: Elongation factor Ts (EF-Ts), N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=94.44  E-value=0.022  Score=37.04  Aligned_cols=36  Identities=19%  Similarity=0.209  Sum_probs=33.2

Q ss_pred             HHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhh
Q 026176            9 RDKLQQFVSITGASEKAALQALKASDWHLEGAFDVF   44 (242)
Q Consensus         9 ~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~f   44 (242)
                      .+.|++..+.||+.-..+...|+.++||++.|++--
T Consensus         5 ~~~iK~LR~~Tgag~~dCKkAL~e~~gD~ekA~e~L   40 (54)
T d1efub3           5 ASLVKELRERTGAGMMDCKKALTEANGDIELAIENM   40 (54)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence            468999999999999999999999999999998753

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=94.41  E-value=0.11  Score=35.59  Aligned_cols=65  Identities=8%  Similarity=0.006  Sum_probs=54.5

Q ss_pred             HHHHHHHHHhcCCC-CCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~-~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      +.+.+.|+.|=.++ ...|...-+.+.+..||+.|.+-.+--+--.+....-|.|+-+||+.-|.+
T Consensus        15 ~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1          15 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            67778899996543 358999999999999999998877777777777777899999999998865

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=94.28  E-value=0.039  Score=36.56  Aligned_cols=65  Identities=9%  Similarity=0.108  Sum_probs=54.1

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCC-CchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDP-QDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~-ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..|.++|..|-.+....|+.+-+.+.+..+|..| .+-.+--+-..+....-|.|+-+||+.-|++
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r   67 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   67 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            4688999999766567999999999999999986 5555556667788888999999999988764

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=94.27  E-value=0.12  Score=37.19  Aligned_cols=101  Identities=10%  Similarity=0.101  Sum_probs=66.0

Q ss_pred             hhCCCHHHHHHHHHhCC--CCchhhhhhhccccCCCCcCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCc---
Q 026176           18 ITGASEKAALQALKASD--WHLEGAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD---   92 (242)
Q Consensus        18 ~T~~s~~~A~~~L~~~~--w~le~A~~~ff~~~~~~~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed---   92 (242)
                      +.|.|++.....++..+  -.++  ...|+.--. -+......|.++|+.|-.+....|+.+-+...++.||...+.   
T Consensus         2 ~~gls~~di~~~~~~~~~~gsi~--~~eF~~~~~-l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~   78 (107)
T d2pvba_           2 FAGLKDADVAAALAACSAADSFK--HKEFFAKVG-LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTD   78 (107)
T ss_dssp             CTTSCHHHHHHHHHHTCSTTCCC--HHHHHHHHT-GGGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCH
T ss_pred             CCCCCHHHHHHHHHhccCCCCcC--HHHHHHHHh-cccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCH
Confidence            45777776666666543  1222  122322111 134467889999999976666799999999999999765332   


Q ss_pred             hHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           93 IVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        93 ~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      -.+=.+-..+-...-|.|+.+||+..|++
T Consensus        79 ~~~~~l~~~~D~d~dG~I~~~EF~~~m~a  107 (107)
T d2pvba_          79 AETKAFLADGDKDGDGMIGVDEFAAMIKA  107 (107)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHcC
Confidence            23333334556677899999999988763

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.13  E-value=0.17  Score=38.94  Aligned_cols=107  Identities=9%  Similarity=0.139  Sum_probs=74.8

Q ss_pred             CcCCHHHHHHHHHHhcCCCC-CccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCC-HHH
Q 026176           52 SLTDTRHLEELYNRYKDPYL-DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS-LDK  129 (242)
Q Consensus        52 ~~~~~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ds-i~~  129 (242)
                      +..+.+.|.++|.+++...+ ..|+.+-+.++++.+|....+..+=.|...+-...-|.|+-.||+.++..+.-.+ .++
T Consensus        16 ~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~   95 (189)
T d1jbaa_          16 GAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHK   95 (189)
T ss_dssp             CHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHH
T ss_pred             CccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHH
Confidence            34577899999999975443 5899999999999999887776676777888888999999999999998875433 344


Q ss_pred             HHHHHHHHHHH---ccchHHHHHHHHHHhHhh
Q 026176          130 FRERISFMRAE---LKDEQKFREIYNFAFAWA  158 (242)
Q Consensus       130 lk~~l~~l~~~---l~~~~~Fk~~Y~f~F~f~  158 (242)
                      ++....-.+..   .-+..+|..+++-.+...
T Consensus        96 ~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~  127 (189)
T d1jbaa_          96 LKWTFKIYDKDRNGCIDRQELLDIVESIYKLK  127 (189)
T ss_dssp             HHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhccCCCCcccHhHHHHHHHHHHHhh
Confidence            44443332211   112334555555444443

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.92  E-value=0.091  Score=33.75  Aligned_cols=60  Identities=10%  Similarity=0.125  Sum_probs=52.8

Q ss_pred             HHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHH
Q 026176           58 HLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIG  117 (242)
Q Consensus        58 ~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~  117 (242)
                      .|.+.|..|=......|..+-+.+.+..+|..+.+-.+-.+...+....-|.|+-+||++
T Consensus         2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            567888888766667999999999999999999998888888888888889999999985

>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 1, UBAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.76  E-value=0.025  Score=37.83  Aligned_cols=44  Identities=27%  Similarity=0.440  Sum_probs=39.1

Q ss_pred             CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            4 LSRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         4 l~~~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      +++..++.|++.+++ |-+++.|++.|+.+++|+|.|++--|.+.
T Consensus        15 ~~~~de~~v~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Lls~~   58 (63)
T d1wgna_          15 LSPSERQCVETVVNM-GYSYECVLRAMKKKGENIEQILDYLFAHS   58 (63)
T ss_dssp             CCHHHHHHHHHHHHH-HCCHHHHHHHHHHHCSCHHHHHHHHHHHS
T ss_pred             CCchhHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence            566678889999987 88999999999999999999999999764

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.31  E-value=0.045  Score=38.61  Aligned_cols=65  Identities=6%  Similarity=0.040  Sum_probs=50.5

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+++.++|+.+--+..+.|+.+-+..++..+|++.+.+.  .+-..+-...-|.++++||+..|+-
T Consensus         8 e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~--~i~~~~D~d~dG~l~~~EF~~am~L   72 (95)
T d1c07a_           8 EKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLA--HIWSLCDTKDCGKLSKDQFALAFHL   72 (95)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHH--HHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHH--HHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            3577889999985444569999999999999998765443  4444566777899999999988853

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=93.27  E-value=0.027  Score=39.19  Aligned_cols=63  Identities=13%  Similarity=0.045  Sum_probs=54.1

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHh
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (242)
                      +.|.++|+.|=......|+.+-+.+.+..||+.|.+-.+--+...+....-|.|+.+||+..|
T Consensus        23 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          23 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             TTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            457888999965556699999999999999999988888888888888888999999998754

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.16  E-value=0.98  Score=32.62  Aligned_cols=67  Identities=9%  Similarity=0.114  Sum_probs=56.8

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..+.++|.+|=......|..+=+.+.+..+|..|....+.-+.........+.++.++|+..+....
T Consensus        10 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (146)
T d1lkja_          10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQL   76 (146)
T ss_dssp             HHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhh
Confidence            5677889999543346999999999999999999988888888888888899999999999887654

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.88  E-value=0.12  Score=35.13  Aligned_cols=69  Identities=10%  Similarity=0.082  Sum_probs=52.3

Q ss_pred             CCHHHHHHHHHHhcCC--CCCccChHHHHHHHHHc--CCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           54 TDTRHLEELYNRYKDP--YLDMILVDGITLLCNDL--QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~--~~d~I~~dG~~~~~~DL--gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      .....|.++|.+|...  +.+.|+.+-+.+++..+  +..++.-.+=.+...+....=|.|+-+||+.-|.++
T Consensus         4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l   76 (78)
T d1cb1a_           4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            4678999999999753  33689999999999887  444332223345666677778999999999988775

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.75  E-value=0.22  Score=33.52  Aligned_cols=64  Identities=9%  Similarity=0.113  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHh
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (242)
                      ...|.+.|..|=......|+.+-+.+.|..+|+.+.+..+-.|...+....-|.|+-.+|+.-+
T Consensus        19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            4678888988865556799999999999999999999999999999999999999999999754

>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Rhomboid family protein At3g58460
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.73  E-value=0.071  Score=36.45  Aligned_cols=41  Identities=27%  Similarity=0.399  Sum_probs=36.6

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ..++.|++.+++ |-+++.|++.|+++++|+|.|++--|+++
T Consensus        28 ~~ee~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Ll~~~   68 (73)
T d1vg5a_          28 ASEEQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMSQS   68 (73)
T ss_dssp             CCHHHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred             cCHHHHHHHHHh-CCCHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence            457789998887 78999999999999999999999998875

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=92.46  E-value=0.22  Score=34.90  Aligned_cols=67  Identities=9%  Similarity=0.026  Sum_probs=51.4

Q ss_pred             HHHHHHHHHhcCCCC--CccChHHHHHHHHHc-----CCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPYL--DMILVDGITLLCNDL-----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~~DL-----gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..|.++|.+|.+.++  +.|+.+.+.+++...     +-.+.+-.+=.+...+....=|.|+.+||+.-|.++.
T Consensus         9 ~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~   82 (93)
T d3c1va1           9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA   82 (93)
T ss_dssp             HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Confidence            467789999986543  479999999999874     4344445555566777888889999999999887753

>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin isopeptidase T
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.35  E-value=0.1  Score=35.66  Aligned_cols=43  Identities=28%  Similarity=0.352  Sum_probs=37.8

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhccccCC
Q 026176            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS   50 (242)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~~~   50 (242)
                      ...+.|++.++ -|-+++.|++.|+.+++|++.|++--|+++..
T Consensus        28 ~d~~~i~~L~~-MGF~~~~a~~AL~~~~~n~e~Av~~Lls~~~~   70 (73)
T d1wiva_          28 IDQSSVDTLLS-FGFAEDVARKALKASGGDIEKATDWVFNNSGP   70 (73)
T ss_dssp             SCHHHHHHHHH-HTCCHHHHHHHHHHTTSCHHHHHHHHHHSCCS
T ss_pred             CCHHHHHHHHh-cCCCHHHHHHHHHHcCCCHHHHHHHHHcCCCC
Confidence            34678999998 58999999999999999999999999988643

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=92.34  E-value=0.29  Score=35.52  Aligned_cols=64  Identities=11%  Similarity=0.063  Sum_probs=52.0

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ..+.++|+.|-.+....|+.+-+.+++..+|..+.+..+--+...+....=|.|+.+||++-|.
T Consensus        82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_          82 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            5677888888554456899999999999999888777777788888888889999999988653

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.24  E-value=0.61  Score=35.55  Aligned_cols=70  Identities=13%  Similarity=0.119  Sum_probs=54.7

Q ss_pred             CcCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCch-HHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           52 SLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDI-VMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        52 ~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~-~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      +-++++.|.++|+.+-.+....|+.+=+.+.+..+|..+.+. .+-.+-..+....-|.|+.+||+.-|..
T Consensus        14 ~~~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~   84 (181)
T d1hqva_          14 ALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY   84 (181)
T ss_dssp             CCSCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhh
Confidence            456789999999999544456999999999999999876443 3334445567778899999999988765

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=92.21  E-value=0.29  Score=35.09  Aligned_cols=68  Identities=9%  Similarity=0.058  Sum_probs=51.3

Q ss_pred             CCHHHHHHHHHHhcCCCCCccChHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL---gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .+...|.++|..|=.+....|..+-+.+++..|   |..+.+-.+=-+...+-...-|.|+.+||++-|++
T Consensus        38 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          38 KTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             CCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            356789999999976556789999998888777   55565554555555666777899999999988765

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=92.16  E-value=1.5  Score=31.98  Aligned_cols=140  Identities=9%  Similarity=0.065  Sum_probs=93.9

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCCCCHHHHHHHHHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISF  136 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~dsi~~lk~~l~~  136 (242)
                      +.|.+.|+.|=......|..+=+..++..++..+.+-.+--+.-.+....-|.++..+|+..+..       .++...  
T Consensus        20 ~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~-------~~~~~~--   90 (162)
T d1topa_          20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR-------QMKEDA--   90 (162)
T ss_dssp             HHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHH-------HHHHHH--
T ss_pred             HHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhh-------hhhhhc--
Confidence            46778888886555568999999999999999998888887877888888899999999877642       111111  


Q ss_pred             HHHHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhhcCCCCCHhhhHHHHH
Q 026176          137 MRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAKHNKAISRDTWSQLLE  212 (242)
Q Consensus       137 l~~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~~~k~IskD~W~~~l~  212 (242)
                             .......++.+|...=..+.-.|+.+....+..-+-....-..++.+++.+...+...||.+.+..++.
T Consensus        91 -------~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~  159 (162)
T d1topa_          91 -------KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME  159 (162)
T ss_dssp             -------HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             -------ccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence                   111223344456555334566778777776655432222123567777777666667899887766653

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=91.64  E-value=1.4  Score=31.76  Aligned_cols=68  Identities=12%  Similarity=0.127  Sum_probs=50.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhccc--ccccccHHHHHHHhHHc
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAA--TMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~--~~g~~tr~eF~~g~~~l  122 (242)
                      .+..+.+.|..|=......|..+-+...+..||++|....+--+.......  ..|.++-++|+..+...
T Consensus         2 ~~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~   71 (145)
T d2mysc_           2 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAA   71 (145)
T ss_pred             CHHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhh
Confidence            457788999999544456999999999999999998665544444334333  46799999999887654

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.62  E-value=1.3  Score=33.60  Aligned_cols=84  Identities=8%  Similarity=0.002  Sum_probs=58.6

Q ss_pred             cCCHHHHHHHHHHhcCCC-CCccChHHHHHHHHHcCCCCCc-hHHHHHHHhhcccccccccHHHHHHHhHHcCCCC-HHH
Q 026176           53 LTDTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS-LDK  129 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~-~d~I~~dG~~~~~~DLgv~~ed-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ds-i~~  129 (242)
                      .-++..|.+||++|++.. +..|+.+-..+.+..++..+.+ ..+=.|...+....-|.|+.+||+.++..++..+ -++
T Consensus        21 ~fs~~Ei~~l~~~F~~~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e~  100 (190)
T d1fpwa_          21 YFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEK  100 (190)
T ss_dssp             CSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCchHHH
Confidence            346678888888886432 3578888888888888766543 3333466677777789999999999999876533 344


Q ss_pred             HHHHHHH
Q 026176          130 FRERISF  136 (242)
Q Consensus       130 lk~~l~~  136 (242)
                      ++....-
T Consensus       101 ~~~~F~~  107 (190)
T d1fpwa_         101 LSWAFEL  107 (190)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5444433

>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Tudor domain containing protein 3, TDRD3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.57  E-value=0.085  Score=34.93  Aligned_cols=41  Identities=27%  Similarity=0.401  Sum_probs=37.1

Q ss_pred             chHHHHHHHHhhhCCCHHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            7 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         7 ~q~~~i~~F~~~T~~s~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      ...+.|++.+++ |-++..|++.|..++.+++.|++--|+++
T Consensus         8 ~d~~~v~~L~~M-GF~~~~a~~AL~~~~~~~e~A~~wL~~~~   48 (63)
T d1wjia_           8 VDEKALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTSN   48 (63)
T ss_dssp             SCHHHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred             cCHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence            346789999998 99999999999999999999999999765

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.47  E-value=0.23  Score=35.80  Aligned_cols=67  Identities=6%  Similarity=-0.023  Sum_probs=52.7

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ....+.+.++|+++-......|..+=+..++...|++.+.+..+  -.++....-|.++++||+..|+=
T Consensus        18 ~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~~~~L~~I--w~l~D~d~dG~l~~~EF~~am~L   84 (110)
T d1iq3a_          18 EEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYI--WELSDADCDGALTLPEFCAAFHL   84 (110)
T ss_dssp             SSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHH--HHHHCSSSCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhccchHHHHHH--HHHhccCCCCeECHHHHHHHHHH
Confidence            34568899999998644456899999999999999998876553  23456777899999999987763

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.35  E-value=0.15  Score=36.10  Aligned_cols=65  Identities=14%  Similarity=0.053  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ....+++|+.+-....+.|+.+=+.+++...|++.+.+.  -+-.......-|.++++||+.+|+-+
T Consensus        10 ~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L~~~~L~--~i~~~~D~d~dG~L~~~EF~~am~Li   74 (99)
T d1qjta_          10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILG--KIWDLADTDGKGVLSKQEFFVALRLV   74 (99)
T ss_dssp             CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHH--HHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred             cHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCcHHHHH--HHHHHHcCCCCCccCHHHHHHHHHHH
Confidence            346678899886545568999999999999998655322  33334466778999999999998743

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.09  E-value=0.73  Score=34.97  Aligned_cols=70  Identities=10%  Similarity=0.073  Sum_probs=52.1

Q ss_pred             CCHHHHHHHHHHhcCCC-CCccChHHHHHHHHHcCCCCCc-hHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           54 TDTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~-~d~I~~dG~~~~~~DLgv~~ed-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      -++..|.+||.+|++-+ ...|+.+...+.+..++..+.. ...-.|...+....-|.|+.+||+.++..+.
T Consensus        19 fs~~Ei~~l~~~F~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~   90 (187)
T d1g8ia_          19 FTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTS   90 (187)
T ss_dssp             SCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhc
Confidence            35678888888886433 3589999999999999887754 3333455666666679999999999997754

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.04  E-value=0.48  Score=33.83  Aligned_cols=62  Identities=15%  Similarity=0.132  Sum_probs=43.7

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGG  118 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g  118 (242)
                      ..+..+|..|-......|+.+.+.+.|..+|+...+-.+-.+...+....=|.|+.+||++-
T Consensus        79 ~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~  140 (141)
T d2obha1          79 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI  140 (141)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHH
T ss_pred             HHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHh
Confidence            45666677666555557777777777777777777766666766776666677777777764

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=91.04  E-value=0.37  Score=34.31  Aligned_cols=68  Identities=7%  Similarity=0.026  Sum_probs=53.9

Q ss_pred             CCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCC---CCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVD---PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~---~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .....+.++|+.|-.+....|..+.+.+++..|+..   +.+..+-.+-..+....=|.|+.+||+.-|++
T Consensus        38 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             SCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             CCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            356788999999976556799999999999998764   34455556666677888899999999988764

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.99  E-value=0.15  Score=35.89  Aligned_cols=64  Identities=9%  Similarity=0.071  Sum_probs=49.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+...++|+.+- +....|..+-+..++...|++.+++.  .+-..+....-|.++++||+..|+-
T Consensus         8 e~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl~~~~L~--~Iw~~~D~~~dG~l~~~EF~~a~~L   71 (95)
T d2jxca1           8 DKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILG--RVWELSDIDHDGMLDRDEFAVAMFL   71 (95)
T ss_dssp             HHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSCCHHHHH--HHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcCCCHHHHH--HHHHHhcCCCCCeEcHHHHHHHHHH
Confidence            3467889999986 34468999999999999999766433  3444567788899999999877664

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.74  E-value=0.16  Score=35.24  Aligned_cols=64  Identities=5%  Similarity=-0.013  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .+.+.++|+.+-....+.|+.+-+..++...|++.+.+.-  +-..+-...-|.++++||+.+|+-
T Consensus         8 ~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~~--i~~~~D~d~dG~l~~~EF~~a~~l   71 (92)
T d1fi6a_           8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSH--IWELSDFDKDGALTLDEFCAAFHL   71 (92)
T ss_dssp             HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHH--HHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHHH--HHHHhCCCCCCeecHHHHHHHHHH
Confidence            4567788888854445689999999999999986654332  333556777899999999987754

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=90.67  E-value=0.92  Score=32.27  Aligned_cols=69  Identities=7%  Similarity=0.049  Sum_probs=49.9

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDL---QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL---gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ......+.++|..|=.+....|+.+-+..++..|   |..+.+-.+=.+...+-...=|.|+.+||++-|.+
T Consensus        37 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d1pvaa_          37 AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE  108 (109)
T ss_dssp             TSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             cCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence            3456788889999865555689999888888877   55565544444555566667789999999987753

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.60  E-value=1.5  Score=32.78  Aligned_cols=64  Identities=13%  Similarity=0.105  Sum_probs=48.6

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCch--------HHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDI--------VMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~--------~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      +.+.++|+++..+ ...|+..-+.+.+..+|..+.+.        .+-.+...+....-|.|+-+||+..+..
T Consensus         4 ~~~r~~F~~~d~~-dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~   75 (173)
T d1alva_           4 RQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN   75 (173)
T ss_dssp             HHHHHHHHHHHGG-GTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC-CCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhh
Confidence            5789999999854 46899999999999888776432        2334455667777899999999887654

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.58  E-value=0.31  Score=34.81  Aligned_cols=68  Identities=6%  Similarity=0.046  Sum_probs=54.4

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCC---CCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQV---DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv---~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ......+.++|+.|-.+....|..+-+.+++..||.   .+.+-.+-.+...+-...=|.|+.+||+..|+
T Consensus        37 ~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          37 KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             cCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            446788999999998776779999999999998854   34555666666677778889999999998775

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=90.04  E-value=0.35  Score=33.52  Aligned_cols=67  Identities=10%  Similarity=-0.024  Sum_probs=52.2

Q ss_pred             HHHHHHHHHhcCCCC--CccChHHHHHHHHHcCCC-----CCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPYL--DMILVDGITLLCNDLQVD-----PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~~DLgv~-----~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..|.++|.+|.+.++  +.|+.+-+.+.+..++..     +.+-.+-.+...+....=|.|+.+||+.-|..+-
T Consensus         9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~   82 (93)
T d1zfsa1           9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT   82 (93)
T ss_dssp             HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            578889999976543  589999999999988743     2344455566778888899999999999887654

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=89.66  E-value=0.58  Score=35.00  Aligned_cols=65  Identities=6%  Similarity=-0.093  Sum_probs=51.3

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+..+|..+=......|..+-+.++++.+|+...+-.+-.+...+-...=|.|+.+||++-+..
T Consensus       105 ~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~  169 (187)
T d1uhka1         105 IWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG  169 (187)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence            45777888775444568999999999999998877666667777778888899999999876655

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=89.40  E-value=0.5  Score=35.60  Aligned_cols=65  Identities=8%  Similarity=0.030  Sum_probs=45.7

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.++|..|=......|..+-+.++|..+|+.+.+-.+-.+...+-...=|.|+.+||++-+..
T Consensus       107 ~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~  171 (189)
T d1qv0a_         107 EWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG  171 (189)
T ss_dssp             HHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            45666777775444568888888888888888877666666666777777788888888876654

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.38  E-value=0.57  Score=35.26  Aligned_cols=68  Identities=7%  Similarity=-0.091  Sum_probs=52.2

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCc-----hHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD-----IVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed-----~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      +.....+.++|++++++ ...|+.+=+.+.+..+|+.+..     -.+-.+-..+....-|.|+-+||+..+..
T Consensus         3 ~~~~~~~~~~F~~~~~~-dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~   75 (172)
T d1juoa_           3 GQTQDPLYGYFAAVAGQ-DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV   75 (172)
T ss_dssp             TCCCCTTHHHHHHHHTT-TTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHhCCC-CCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHh
Confidence            34556788999999754 4599999999999999998742     22334445678888999999999987754

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=89.22  E-value=0.75  Score=32.26  Aligned_cols=66  Identities=9%  Similarity=0.005  Sum_probs=49.7

Q ss_pred             HHHHHHHHHhcCCC--CCccChHHHHHHHHHcCCC--CCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKDPY--LDMILVDGITLLCNDLQVD--PQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~--~d~I~~dG~~~~~~DLgv~--~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..|.++|.+|.+.+  .+.|+.+-+.+++..++-.  +++-.+=-+-..+....=|.|.-+||+.-+..+
T Consensus        14 ~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l   83 (98)
T d1yuta1          14 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL   83 (98)
T ss_dssp             HHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            57788999996543  3699999999999887532  333234456666788888999999999888764

>d1vdla_ a.5.2.1 (A:) Ubiquitin carboxyl-terminal hydrolase 25 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin carboxyl-terminal hydrolase 25
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.06  E-value=0.18  Score=34.54  Aligned_cols=42  Identities=31%  Similarity=0.305  Sum_probs=35.5

Q ss_pred             chHHHHHHHHhhhCCC-HHHHHHHHHhCCCCchhhhhhhcccc
Q 026176            7 SNRDKLQQFVSITGAS-EKAALQALKASDWHLEGAFDVFYSQP   48 (242)
Q Consensus         7 ~q~~~i~~F~~~T~~s-~~~A~~~L~~~~w~le~A~~~ff~~~   48 (242)
                      .|.-.++|..+|||+. +..-.+.|++++.||..|+.---+.+
T Consensus        23 hqQ~lLNQLrEITGIqD~q~L~~ALkas~Gdl~~AV~~LT~~~   65 (80)
T d1vdla_          23 HQQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKN   65 (80)
T ss_dssp             CHHHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHhCCCcHHHHHHHHHhcCCCHHHHHHHHhcCC
Confidence            4566799999999997 67788999999999999997665554

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=88.97  E-value=0.55  Score=34.93  Aligned_cols=65  Identities=9%  Similarity=0.140  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ...+..+|..|=......|+.+-+.++|+.+|++.+++..+.  ..+-...-|.|+.+||+..++..
T Consensus       104 ~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~~~~~~~~f--~~~D~d~dG~i~~~EF~~~~~~f  168 (185)
T d2sasa_         104 QNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVY--NVITDGGKVTFDLNRYKELYYRL  168 (185)
T ss_dssp             HHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHH--HHHHTTTTSCCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCCHHHHHHHH--HHcCCCCCCCCcHHHHHHHHHHH
Confidence            456888888886544568999999999999999988876543  44556668999999999988764

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.04  E-value=0.62  Score=35.52  Aligned_cols=63  Identities=3%  Similarity=-0.016  Sum_probs=46.9

Q ss_pred             HHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCc----h-HHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           59 LEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD----I-VMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        59 l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed----~-~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      +-++|++++++ ...|+.+=+.+.+..+|+++..    + .+-.+.-.+-...-|.++-+||+.-|..+
T Consensus         2 ~~~~F~~~a~~-dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~   69 (165)
T d1k94a_           2 VYTYFSAVAGQ-DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL   69 (165)
T ss_dssp             HHHHHHHHHGG-GTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHhcCC-CCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhcc
Confidence            45799999754 4489999999999999998731    1 22233344567778999999999988763

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=88.01  E-value=2.1  Score=30.94  Aligned_cols=66  Identities=8%  Similarity=0.013  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHhcCCCC-CccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYL-DMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .+.|.+.|+.+-.+.. ..|..+=+...+..+|+.+....+-.+.....-...|.++.++|......
T Consensus        13 ~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (156)
T d1dtla_          13 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR   79 (156)
T ss_dssp             HHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhh
Confidence            3567778988875543 58999999999999999999888888888888888999999999876554

>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Supernatant protein factor (SPF), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.90  E-value=0.31  Score=32.74  Aligned_cols=43  Identities=19%  Similarity=0.269  Sum_probs=36.7

Q ss_pred             CCCcchHHHHHHHHhhhC--------CCHHHHHHHHHhCCCCchhhhhhhc
Q 026176            3 KLSRSNRDKLQQFVSITG--------ASEKAALQALKASDWHLEGAFDVFY   45 (242)
Q Consensus         3 ~l~~~q~~~i~~F~~~T~--------~s~~~A~~~L~~~~w~le~A~~~ff   45 (242)
                      .||+.|.++|.+|.+..+        .++....+||.+.+||++.|...+-
T Consensus         7 elt~~q~~~l~elr~~l~~~~~~~~~~dd~~LlRFLrAr~fdv~kA~~ml~   57 (75)
T d1olma1           7 DLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLR   57 (75)
T ss_dssp             BCCHHHHHHHHHHHHHHGGGGGGSSCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHCCCCHHHHHHHHH
Confidence            488999999999988753        3477899999999999999998774

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.89  E-value=1.8  Score=32.96  Aligned_cols=73  Identities=10%  Similarity=0.085  Sum_probs=53.3

Q ss_pred             CCHHHHHHHHHHhcCCCC-CccChHHHHHHHHHcCCCCCc-hHHHHHHHhhcccccccccHHHHHHHhHHcCCCC
Q 026176           54 TDTRHLEELYNRYKDPYL-DMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS  126 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~~DLgv~~ed-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ds  126 (242)
                      -+...|..||.+|.+..+ ..|+.+-..+++..++..+.+ ...-.+.-.+....-|.|+..||+.++..+...+
T Consensus        22 f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~   96 (201)
T d1omra_          22 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK   96 (201)
T ss_dssp             SCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSC
T ss_pred             CCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccc
Confidence            356777777777754333 489999999999999877644 3334566666777789999999999998765433

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=87.80  E-value=0.68  Score=32.35  Aligned_cols=67  Identities=10%  Similarity=0.075  Sum_probs=52.6

Q ss_pred             HHHHHHHHHhcCCCC--CccChHHHHHHHHHc-----CCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPYL--DMILVDGITLLCNDL-----QVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~--d~I~~dG~~~~~~DL-----gv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..|..+|.+|.+.++  +.|+.+.+.+++...     +-..++..+=-+-..+....=|.|+-+||+.-|..+-
T Consensus         9 ~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~   82 (93)
T d1ksoa_           9 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC   82 (93)
T ss_dssp             HHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            467789999987654  379999999999764     3344566677777788888889999999999887753

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=87.71  E-value=0.5  Score=32.81  Aligned_cols=66  Identities=15%  Similarity=0.155  Sum_probs=54.5

Q ss_pred             HHHHHHHHHhcCCC--CCccChHHHHHHHHH---cCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKDPY--LDMILVDGITLLCND---LQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~--~d~I~~dG~~~~~~D---Lgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..|..+|.+|.+.+  .+.|+...+.++++.   +|..+++..+-.+-..+....=|.|+-+||+.-+.++
T Consensus         9 ~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l   79 (89)
T d1k8ua_           9 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   79 (89)
T ss_dssp             HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            46777999997654  357999999999987   7877877777788888888888999999999887764

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=87.43  E-value=1.2  Score=32.20  Aligned_cols=110  Identities=10%  Similarity=0.121  Sum_probs=69.4

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC----CCCHHHHHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG----IDSLDKFRE  132 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~----~dsi~~lk~  132 (242)
                      +...+.|+.|-......|..+-+.+.+..||++|..-.+--    +....-|.++-++|+.-+....    ..+.+.|+.
T Consensus         5 ~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~----~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~   80 (140)
T d1ggwa_           5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITE----IESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVK   80 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHH----HHTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhh----hhccccccccchhhhhhhhhhhhcchhhHHHHHHH
Confidence            56678899985444569999999999999999997654432    3345568999999999886542    235566666


Q ss_pred             HHHHHHHHc---cchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHh
Q 026176          133 RISFMRAEL---KDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLL  178 (242)
Q Consensus       133 ~l~~l~~~l---~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~ll  178 (242)
                      ....+...=   -+..+|+++-.   .+    | ..|+-+.+-++.+.+
T Consensus        81 aF~~~D~d~~G~I~~~el~~~l~---~~----g-~~lt~~e~~~l~~~~  121 (140)
T d1ggwa_          81 GFQVFDKDATGMIGVGELRYVLT---SL----G-EKLSNEEMDELLKGV  121 (140)
T ss_dssp             HHHTTCSSCSSCCCHHHHHHHHH---HH----H-SCSCHHHHHHHHHHT
T ss_pred             HHHHHhccCCCcchHHHHHHHHH---Hc----C-CCCCHHHHHHHHHhh
Confidence            555543321   23344555543   11    1 125555555555543

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.42  E-value=0.54  Score=34.21  Aligned_cols=67  Identities=10%  Similarity=0.133  Sum_probs=55.2

Q ss_pred             CCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           54 TDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        54 ~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      .....|.+.|..|-......|..+-+.+.+..+|..+.+-.+-.+...+....=|.|+-+||++.+.
T Consensus        78 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~  144 (146)
T d1m45a_          78 AKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  144 (146)
T ss_dssp             CCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             chHHHHHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence            3446789999999655567999999999999999988776666777777777789999999998764

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=87.42  E-value=0.36  Score=35.50  Aligned_cols=120  Identities=9%  Similarity=0.107  Sum_probs=77.1

Q ss_pred             CCCCcchHHHHHH-HHhh-----hC-CCHHHHHHHHHhCCCCchhh-----hhhhccccCC------------------C
Q 026176            2 HKLSRSNRDKLQQ-FVSI-----TG-ASEKAALQALKASDWHLEGA-----FDVFYSQPQS------------------K   51 (242)
Q Consensus         2 ~~l~~~q~~~i~~-F~~~-----T~-~s~~~A~~~L~~~~w~le~A-----~~~ff~~~~~------------------~   51 (242)
                      .+||..|.+.|++ |..+     +| ++...-...|++.+-++...     +..+..+..+                  .
T Consensus         6 ~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (156)
T d1dtla_           6 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS   85 (156)
T ss_dssp             GGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC---
T ss_pred             HHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhcccccc
Confidence            3678888877765 6532     44 46777788888877655432     1222222111                  0


Q ss_pred             CcCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           52 SLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        52 ~~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      .......|..+|..|-......|..+-+.+++..+|....+-.+--+...+....=|.|+.+||++-|+.
T Consensus        86 ~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g  155 (156)
T d1dtla_          86 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG  155 (156)
T ss_dssp             --CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             cccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence            1123456777888887555568888888888888888887766666667776666788999998877653

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.17  E-value=1.2  Score=33.73  Aligned_cols=63  Identities=2%  Similarity=-0.081  Sum_probs=47.1

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.++|..|-.+.+..|+.+-+...+..+|+.+.+..+=.|.-...  .-|.++-++|+..|.+
T Consensus        70 ~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d--~~g~i~~~eFi~~~~~  132 (165)
T d1k94a_          70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCVK  132 (165)
T ss_dssp             HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHC--BTTBCBHHHHHHHHHH
T ss_pred             chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcC--CCCcCcHHHHHHHHHH
Confidence            56677888886655678999999999999999876644444444443  3489999999988765

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=87.08  E-value=0.45  Score=34.89  Aligned_cols=67  Identities=9%  Similarity=0.055  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcCC
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGI  124 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~  124 (242)
                      ...+.++|..|=......|+.+=+.++|+.+|++++.+..  +...+-...=|.++.+||+..++...-
T Consensus       101 ~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~~~~~~~~--~f~~~D~d~dG~i~~~Ef~~~~~~~~~  167 (176)
T d1nyaa_         101 GPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAE--AFNQVDTNGNGELSLDELLTAVRDFHF  167 (176)
T ss_dssp             HHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHH--HHHHHCTTCSSEEEHHHHHHHHSCCSS
T ss_pred             HHHHHHHHHHHccCCChhhhHHHHHHHHHhcCCcHHHHHH--HHHHHCCCCCCcEeHHHHHHHHHHHhc
Confidence            3567788988843334599999999999999998776553  455567777899999999999887643

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=86.53  E-value=1.4  Score=32.18  Aligned_cols=66  Identities=6%  Similarity=0.041  Sum_probs=50.5

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..+.+.|..|=......|..+-+.+++...|..+.+..+--|-..+....=|.|+.+||++-|+.+
T Consensus        96 ~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~  161 (162)
T d1topa_          96 EELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV  161 (162)
T ss_dssp             HHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHcC
Confidence            345566777733334589999999999999988887777777777777788999999999877754

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=86.33  E-value=2.9  Score=29.99  Aligned_cols=66  Identities=3%  Similarity=-0.200  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...|.+.|..|-......|..+=+.+.+..+|....+-.+-.+.-.+....-|.|+-.+|++-|+.
T Consensus        76 ~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~  141 (145)
T d2mysb_          76 EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  141 (145)
T ss_pred             HHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence            356777777774444457888888888888887765555555555666666777888888776653

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=86.24  E-value=1.1  Score=32.41  Aligned_cols=67  Identities=10%  Similarity=0.047  Sum_probs=52.1

Q ss_pred             cCCHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhH
Q 026176           53 LTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~  120 (242)
                      ......|.+.|..|-......|+.+-+.+.+..+|....+-.+-.+...+... =|.|+-+||++-|.
T Consensus        72 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~  138 (140)
T d1ggwa_          72 PGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL  138 (140)
T ss_dssp             SCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHh
Confidence            34567899999999655556899999999999999877665555555666655 59999999998764

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=86.15  E-value=1  Score=33.19  Aligned_cols=64  Identities=13%  Similarity=0.003  Sum_probs=50.7

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      ..+..+|..+=......|+.+=+.++|..+|++++++..+  .-.+-...=|.|+.+||+..|...
T Consensus        94 ~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~--f~~~D~d~dG~Is~~Ef~~~~~~f  157 (174)
T d2scpa_          94 GPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPAS--FDAIDTNNDGLLSLEEFVIAGSDF  157 (174)
T ss_dssp             THHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCGGGHHHH--HHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCccccCCHHHHHHHHHHHhhhhHHHHHH--HhhcCCCCCCcEeHHHHHHHHHHH
Confidence            4577788888655556899999999999999988876554  456667778999999999988764

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.00  E-value=2.4  Score=31.46  Aligned_cols=71  Identities=11%  Similarity=0.125  Sum_probs=52.4

Q ss_pred             cCCHHHHHHHHHHhcCCC-CCccChHHHHHHHHHcCCCCCc-hHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           53 LTDTRHLEELYNRYKDPY-LDMILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        53 ~~~~~~l~~lFd~Y~d~~-~d~I~~dG~~~~~~DLgv~~ed-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      .-+++.|+.+|.+|++-+ ...|+.+-..+++..++..+.. ...=.|...+....-|.|+.+||+.++..+.
T Consensus         9 ~ft~~ei~~l~~~F~~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~   81 (178)
T d1s6ca_           9 NFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILL   81 (178)
T ss_dssp             SCCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHh
Confidence            446788999999885433 3489999999999998876532 2223455666777789999999999987653

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.82  E-value=0.78  Score=33.22  Aligned_cols=80  Identities=13%  Similarity=0.046  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHhHHcCCC-CHHHHHHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGID-SLDKFRER  133 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~~d-si~~lk~~  133 (242)
                      ...+..++..|..+....+..+.....+.........-.-+..|+ .+-...-|.|+++||...++.+|.. +-+.++..
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~  124 (146)
T d1lkja_          45 EAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDM  124 (146)
T ss_dssp             HHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHH
T ss_pred             HHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHH
Confidence            456666666666544455666666666666555554444444444 3345566777777777777666653 33444444


Q ss_pred             HH
Q 026176          134 IS  135 (242)
Q Consensus       134 l~  135 (242)
                      +.
T Consensus       125 ~~  126 (146)
T d1lkja_         125 LR  126 (146)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.56  E-value=1.5  Score=33.10  Aligned_cols=65  Identities=11%  Similarity=0.139  Sum_probs=47.8

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+...|..|-......|..+-+.+.+...|....+-.+-.+...+....-|.|+.++|+..+..
T Consensus        86 ~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~  150 (181)
T d1hqva_          86 TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV  150 (181)
T ss_dssp             HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred             cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            44556676665444568888888888888888887777777777777777788888888876643

>d1b0na1 a.34.1.1 (A:74-108) SinR repressor dimerisation domain {Bacillus subtilis [TaxId: 1423]}

class: All alpha proteins
fold: Dimerisation interlock
superfamily: SinR repressor dimerisation domain-like
family: SinR repressor dimerisation domain-like
domain: SinR repressor dimerisation domain
species: Bacillus subtilis [TaxId: 1423]

Probab=85.38  E-value=0.4  Score=27.68  Aligned_cols=28  Identities=11%  Similarity=0.571  Sum_probs=24.9

Q ss_pred             HHHHHHHHhhcCCCCCHhhhHHHHHHHH
Q 026176          188 DHWCQFLQAKHNKAISRDTWSQLLEFAR  215 (242)
Q Consensus       188 ~~W~~FL~~~~~k~IskD~W~~~l~F~~  215 (242)
                      +.|..-+++....+|||++.+-+|+|.+
T Consensus         3 seW~~lVkeAM~SGvSK~QFrEflef~k   30 (35)
T d1b0na1           3 SEWEKLVRDAMTSGVSKKQFREFLDYQK   30 (35)
T ss_dssp             HHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence            4688889888889999999999999975

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=84.55  E-value=4  Score=29.18  Aligned_cols=72  Identities=14%  Similarity=0.194  Sum_probs=51.4

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc-C-CCCHHHHHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL-G-IDSLDKFRE  132 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l-~-~dsi~~lk~  132 (242)
                      +.+.++|+.|=......|..+-+.+.+..||++|.+-.+-.+.   . ..-|.++.++|+..+... . .++.+.|+.
T Consensus         7 ~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~---~-~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~   80 (142)
T d1wdcb_           7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAML---K-EAPGPLNFTMFLSIFSDKLSGTDSEETIRN   80 (142)
T ss_dssp             HHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH---T-TSSSCCCHHHHHHHHHHHTCSCCCHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHH---H-hccCccccccccccccccccccchhhhHHH
Confidence            5677889998544456899999999999999999765543332   2 345899999999988653 2 234444443

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=84.52  E-value=1.9  Score=32.64  Aligned_cols=65  Identities=8%  Similarity=0.004  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCc--------hHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQD--------IVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed--------~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...+.++|++|.+ ....|..+=+.+.+..+|..+..        -.+-.+-..+....-|.|+-+||+..|..
T Consensus        17 ~~~~r~~F~~~d~-~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~   89 (186)
T d1df0a1          17 GDGFRRLFAQLAG-EDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK   89 (186)
T ss_dssp             CHHHHHHHHHHHG-GGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcC-CCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Confidence            3678999999963 34589999999999988877532        13444556678888899999999987655

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=84.45  E-value=1.9  Score=32.61  Aligned_cols=65  Identities=2%  Similarity=-0.070  Sum_probs=50.5

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ..+.+.|..|-......|..+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+.-+..
T Consensus        84 ~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~  148 (182)
T d1y1xa_          84 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF  148 (182)
T ss_dssp             HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             cccccchhccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHHH
Confidence            45666777775444568999999999999998887777777778888888899999999886643

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=83.83  E-value=3.8  Score=29.87  Aligned_cols=153  Identities=8%  Similarity=0.009  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHhcCCCC-CccChHHHHHHHHHcCC----CCCchHHH-----------HHHHhhcccccccccHHHHHHHh
Q 026176           56 TRHLEELYNRYKDPYL-DMILVDGITLLCNDLQV----DPQDIVML-----------VVSWHMKAATMCEFSKQEFIGGL  119 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~-d~I~~dG~~~~~~DLgv----~~ed~~~L-----------vLa~~l~a~~~g~~tr~eF~~g~  119 (242)
                      .+++..+|+.+-|.+. ..|+.+=+..+++.++.    .+.+...-           .+.........|.++.++|...|
T Consensus         7 ~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~   86 (185)
T d2sasa_           7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW   86 (185)
T ss_dssp             HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeHhhHHH
Confidence            4678999999766554 48998888888776643    11111110           12233455567889999999888


Q ss_pred             HHcC--CCCHHHHHHHHHHHHHHccchHHHHHHHHHHhHhhhhcCcccccHHHHHHHHHHhcCCCCcccHHHHHHHHHhh
Q 026176          120 QSLG--IDSLDKFRERISFMRAELKDEQKFREIYNFAFAWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQAK  197 (242)
Q Consensus       120 ~~l~--~dsi~~lk~~l~~l~~~l~~~~~Fk~~Y~f~F~f~k~~gqk~l~~d~Ai~~W~lll~~~~~~~l~~W~~FL~~~  197 (242)
                      ....  ..+...+..             ..+.....+|...=..+.-.|+.+.-..+.+-+ +-. -..++..++.+...
T Consensus        87 ~~~~~~~~~~~~~~~-------------~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~-~l~-~~~~~~~f~~~D~d  151 (185)
T d2sasa_          87 EKTIATCKSVADLPA-------------WCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF-QLQ-CADVPAVYNVITDG  151 (185)
T ss_dssp             HHHHHTCCSGGGSCT-------------THHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSS-CCC-CSSHHHHHHHHHTT
T ss_pred             HHHhhhhhhhhhhhH-------------HHHHHHHHHHHHHccCCCccCCHHHHHHHHHHc-CCC-HHHHHHHHHHcCCC
Confidence            6632  112211111             122222333444433344456666655543321 111 24577777877777


Q ss_pred             cCCCCCHhhhHHHH-HHHHhhccccCC
Q 026176          198 HNKAISRDTWSQLL-EFARVRQWTLHY  223 (242)
Q Consensus       198 ~~k~IskD~W~~~l-~F~~~~~~~l~~  223 (242)
                      +...||.+.|..++ +|...-+.+-++
T Consensus       152 ~dG~i~~~EF~~~~~~f~~~~~~d~~~  178 (185)
T d2sasa_         152 GKVTFDLNRYKELYYRLLTSPAADAGN  178 (185)
T ss_dssp             TTSCCSHHHHHHHHHHHHHCSSCSGGG
T ss_pred             CCCCCcHHHHHHHHHHHhcCCCCCccc
Confidence            77899999998877 777554444443

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=83.41  E-value=1.1  Score=33.92  Aligned_cols=66  Identities=14%  Similarity=0.054  Sum_probs=57.2

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHc
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSL  122 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l  122 (242)
                      +.|.++|+.+-....+.|..+-+.+.+..+|.+|.+..+=.+...+.....|.|+.++|+..+...
T Consensus        10 ~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~   75 (182)
T d1s6ia_          10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHL   75 (182)
T ss_dssp             CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhh
Confidence            578999998865555689999999999999999988888888888888899999999999877554

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=82.96  E-value=1.5  Score=31.99  Aligned_cols=77  Identities=13%  Similarity=0.234  Sum_probs=52.0

Q ss_pred             HHHHHHHHHhc--CCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC---CCCHHHHH
Q 026176           57 RHLEELYNRYK--DPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG---IDSLDKFR  131 (242)
Q Consensus        57 ~~l~~lFd~Y~--d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~---~dsi~~lk  131 (242)
                      ..+.+.|+.|-  +.....|+.+-+...+..||+.|.+-.+-.+... -...-|.|+-++|+..+..+.   -++.+.++
T Consensus         7 ~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~~~-~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~   85 (152)
T d1wdcc_           7 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGT-HKMGEKSLPFEEFLPAYEGLMDCEQGTFADYM   85 (152)
T ss_dssp             HHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTTCC-SSTTSCEECHHHHHHHHHHHTTSCCCCHHHHH
T ss_pred             HHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhhhh-hccccccccccccccccccccccchhHHHhhh
Confidence            45667787773  2223489999999999999999977665544332 233457899999999886542   24455554


Q ss_pred             HHH
Q 026176          132 ERI  134 (242)
Q Consensus       132 ~~l  134 (242)
                      ...
T Consensus        86 ~aF   88 (152)
T d1wdcc_          86 EAF   88 (152)
T ss_dssp             HHH
T ss_pred             hhh
Confidence            443

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=82.65  E-value=6.4  Score=28.01  Aligned_cols=64  Identities=8%  Similarity=-0.056  Sum_probs=47.2

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..+.+.|+.|-......|..+-+...+..||..|.....+-..  . ...-|.++.++|+..+.+..
T Consensus         7 ~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~~~~~--~-~~~~g~i~~~eF~~~~~~~~   70 (145)
T d2mysb_           7 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAM--I-KEASGPINFTVFLTMFGEKL   70 (145)
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHHHHHH--H-HhccCceeechhhhhhhhcc
Confidence            4567779999655556999999999999999887554443322  2 24568999999999886643

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=82.56  E-value=2.4  Score=29.41  Aligned_cols=64  Identities=11%  Similarity=0.087  Sum_probs=48.2

Q ss_pred             HHHHHHHHHhcCCCCCccChHHHHHHHHHcCC---------CCCchHHHHHHHhhcccccccccHHHHHHHhHHcC
Q 026176           57 RHLEELYNRYKDPYLDMILVDGITLLCNDLQV---------DPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLG  123 (242)
Q Consensus        57 ~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv---------~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~  123 (242)
                      ..|.++|++|.+. .+.|+.+-+.+++..++-         +|+.+..  +...+-...=|.|+-+||+.-|.++.
T Consensus        10 ~~l~~~F~~y~~~-dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~--~~~~~D~n~DG~I~F~EF~~li~~l~   82 (100)
T d1psra_          10 IGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLAD--VFEKKDKNEDKKIDFSEFLSLLGDIA   82 (100)
T ss_dssp             HHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGT--HHHHHCTTCSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC-CCcccHHHHHHHHHHHccccccccccCCHHHHHH--HHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence            5677899999753 468999999999998753         3333332  34667788889999999999887753

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.35  E-value=7.4  Score=28.52  Aligned_cols=54  Identities=11%  Similarity=0.004  Sum_probs=28.0

Q ss_pred             ccChHHHHHHHHHcCCCCCc-hHHHHHHHhhcccccccccHHHHHHHhHHcCCCC
Q 026176           73 MILVDGITLLCNDLQVDPQD-IVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDS  126 (242)
Q Consensus        73 ~I~~dG~~~~~~DLgv~~ed-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ds  126 (242)
                      .|+.+-+.+.+..++..+.. ..+=-|...+....-|.++-+||+.++..+.-.+
T Consensus        38 ~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~   92 (181)
T d1bjfa_          38 HLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGK   92 (181)
T ss_dssp             EEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSC
T ss_pred             CcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhc
Confidence            45555555555555544422 2222234444445556677777777666654433

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.95  E-value=1.1  Score=34.20  Aligned_cols=82  Identities=9%  Similarity=0.039  Sum_probs=47.6

Q ss_pred             HHHHHHhcCC-CCCccChHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHhHHcCC------CCHHHHH
Q 026176           60 EELYNRYKDP-YLDMILVDGITLLCNDLQVDPQDIVMLVVSW-HMKAATMCEFSKQEFIGGLQSLGI------DSLDKFR  131 (242)
Q Consensus        60 ~~lFd~Y~d~-~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~~------dsi~~lk  131 (242)
                      +++|+.+-.. ..+.|+.+..++.+..+.-...--.-+-.|+ .+-...-|.||++|+...++.+..      -|-++++
T Consensus        60 ~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~  139 (180)
T d1xo5a_          60 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMK  139 (180)
T ss_dssp             HHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHH
T ss_pred             HHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHH
Confidence            4455554322 2358988888888877643322222333344 345777899999999888887621      1234455


Q ss_pred             HHHHHHHHHc
Q 026176          132 ERISFMRAEL  141 (242)
Q Consensus       132 ~~l~~l~~~l  141 (242)
                      ..+..+-+++
T Consensus       140 ~~v~~~~~~~  149 (180)
T d1xo5a_         140 QLIDNILEES  149 (180)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            5555554444

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=81.41  E-value=1.7  Score=30.28  Aligned_cols=60  Identities=12%  Similarity=0.016  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHh
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGL  119 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~  119 (242)
                      ...+..+|..|-.+....|..+-+.+++..+|.+    .+.-+...+..-.=|.||.+||++-|
T Consensus        74 ~~~~~~~F~~~D~~~~g~i~~~el~~~~~~~~~~----~~~~~~~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_          74 KIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCH----HHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             cccccccccccccccCCcccHHHHHHHHHhcCcH----HHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence            3567788888865445688888888888877752    23333455566667888888888754

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=80.70  E-value=3.2  Score=30.07  Aligned_cols=117  Identities=9%  Similarity=0.005  Sum_probs=65.3

Q ss_pred             CCcchHHHHHH-HHhh-h--C----CCHHHHHHHHHhCCCCchhh-hhhhc---cccC----------------CCCcCC
Q 026176            4 LSRSNRDKLQQ-FVSI-T--G----ASEKAALQALKASDWHLEGA-FDVFY---SQPQ----------------SKSLTD   55 (242)
Q Consensus         4 l~~~q~~~i~~-F~~~-T--~----~s~~~A~~~L~~~~w~le~A-~~~ff---~~~~----------------~~~~~~   55 (242)
                      ||..|.+.+++ |..+ +  +    ++...-+.+|++-|.++..+ +....   .+..                ......
T Consensus         1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~   80 (152)
T d1wdcc_           1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGT   80 (152)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTTCCSSTTSCEECHHHHHHHHHHHTTSCCCC
T ss_pred             CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhhhhhccccccccccccccccccccccchhH
Confidence            45666555543 4333 1  2    24666777788777665322 22221   1110                011233


Q ss_pred             HHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcc--cccccccHHHHHHHhH
Q 026176           56 TRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKA--ATMCEFSKQEFIGGLQ  120 (242)
Q Consensus        56 ~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a--~~~g~~tr~eF~~g~~  120 (242)
                      ...|.+.|..|-......|..+-+.+.|..+|..+.+-.+=.+...+..  ..-|.|+-++|++-|.
T Consensus        81 ~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~  147 (152)
T d1wdcc_          81 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM  147 (152)
T ss_dssp             HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHH
T ss_pred             HHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHh
Confidence            4567777777754445678888888888888877755444444443332  2347788888877664

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.41  E-value=4.3  Score=30.55  Aligned_cols=67  Identities=9%  Similarity=0.051  Sum_probs=50.7

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHc-------CCCCCchHHHH--HHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDL-------QVDPQDIVMLV--VSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DL-------gv~~ed~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ...++..+|.-|-.+..+.|..+-+.+++..+       .++.+.+.-+|  +...+....-|.||.+||.+.+.+
T Consensus        93 ~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~  168 (180)
T d1xo5a_          93 PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR  168 (180)
T ss_dssp             HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            35689999999954455699999999998876       34455554444  445667888899999999998875

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=80.08  E-value=2.6  Score=30.12  Aligned_cols=66  Identities=6%  Similarity=-0.034  Sum_probs=45.6

Q ss_pred             CHHHHHHHHHHhcCCCCCccChHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHhHH
Q 026176           55 DTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQS  121 (242)
Q Consensus        55 ~~~~l~~lFd~Y~d~~~d~I~~dG~~~~~~DLgv~~ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~  121 (242)
                      ....|.+.|..|-.+....|..+=+.+.+..+|..+.+-.+=.+.. .-...-|.|+-+||++-+-.
T Consensus        79 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~-~~~d~dG~I~y~eF~~~ll~  144 (145)
T d2mysc_          79 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFVKHIMS  144 (145)
T ss_pred             hHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHh-hcCCCCCeEEHHHHHHHHhc
Confidence            4566888888886555568999999999999997764333222222 22344589999999987643