Citrus Sinensis ID: 026187


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240--
MALIALALSQTQQSSSLVMRKHLKEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD
ccEEEEHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHccHHHHHHHHHHHHHHHcccccccc
ccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccHHHcccccccccccHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
MALIALALSQTQQSSSLVMRKHlkeaeltpvlrlgagaCAGIIAMsatypmdmvrgrltvqteksprqYRGIFHALTTVlreegprslykgwlpsvigvipyVGLNFAVYESLKDWLIKSKalglvddnnelgVATRLACgaaagtvgqtvaYPLDVIRRRMQMAGWKDAASvvtgdgktkatLEYNGMVDAFRKTVRhegfgalykglvpnsvkvvpSIAIAFVTYEMVKDILGVEMRISD
MALIAlalsqtqqsssLVMRKHLKEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTvqteksprqyrGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLAcgaaagtvgqtVAYPLDVIRRRMQMAGWKDaasvvtgdgktkaTLEYNGMVDAFRKTVRHEGFGAlykglvpnsvkVVPSIAIAFVTYEMVKDILGVEMRISD
MalialalsqtqqssslVMRKHLKEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLacgaaagtvgqtvaYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD
**********************LKEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVE*****
MALIALALSQTQQSSSLVM**********PVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIK**************VATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWK*********GKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDI**VE*****
MALIALALSQTQQSSSLVMRKHLKEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD
MALIALALSQTQQSSSLVMRKHLKEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASV*******KATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVE*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooo
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
SSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MALIALALSQTQQSSSLVMRKHLKEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query242 2.2.26 [Sep-21-2011]
O04619352 Mitochondrial adenine nuc yes no 0.917 0.630 0.816 1e-105
Q54MZ4434 Mitochondrial substrate c yes no 0.797 0.444 0.386 1e-36
Q19529531 Probable calcium-binding yes no 0.834 0.380 0.359 1e-35
Q9BV35468 Calcium-binding mitochond yes no 0.772 0.399 0.367 2e-35
Q6NYZ6469 Calcium-binding mitochond yes no 0.768 0.396 0.379 2e-35
Q628Z2532 Probable calcium-binding N/A no 0.805 0.366 0.361 8e-35
Q54DU1297 Mitochondrial substrate c no no 0.826 0.673 0.370 9e-35
Q7T0U6473 Calcium-binding mitochond N/A no 0.760 0.389 0.382 2e-34
Q66L49477 Calcium-binding mitochond no no 0.756 0.383 0.365 3e-34
Q5XHA0473 Calcium-binding mitochond no no 0.760 0.389 0.382 4e-34
>sp|O04619|ADNT1_ARATH Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana GN=ADNT1 PE=2 SV=1 Back     alignment and function desciption
 Score =  382 bits (981), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 182/223 (81%), Positives = 200/223 (89%), Gaps = 1/223 (0%)

Query: 20  RKHLKEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTV 79
           R   + A+LTP+LRLGAGA AGIIAMSATYPMDMVRGRLTVQT  SP QYRGI HAL TV
Sbjct: 131 RTGNENAQLTPLLRLGAGATAGIIAMSATYPMDMVRGRLTVQTANSPYQYRGIAHALATV 190

Query: 80  LREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLA 139
           LREEGPR+LY+GWLPSVIGV+PYVGLNF+VYESLKDWL+K    GLV+ NNEL V TRL 
Sbjct: 191 LREEGPRALYRGWLPSVIGVVPYVGLNFSVYESLKDWLVKENPYGLVE-NNELTVVTRLT 249

Query: 140 CGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRH 199
           CGA AGTVGQT+AYPLDVIRRRMQM GWKDA+++VTG+G++ A+LEY GMVDAFRKTVRH
Sbjct: 250 CGAIAGTVGQTIAYPLDVIRRRMQMVGWKDASAIVTGEGRSTASLEYTGMVDAFRKTVRH 309

Query: 200 EGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD 242
           EGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKD+LGVE RISD
Sbjct: 310 EGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDVLGVEFRISD 352




Mitochondrial adenylate carrier that catalyzes specifically the transport of ATP, ADP and AMP by a counter-exchange mechanism across the inner mitochondrial membrane. Substrate preference in reconstituted proteoliposomes is ATP > AMP > ADP. May play a role in oxidative phosphorylation and be important for the provision of energy required to support growth in heterotrophic tissues.
Arabidopsis thaliana (taxid: 3702)
>sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1 Back     alignment and function description
>sp|Q19529|CMC3_CAEEL Probable calcium-binding mitochondrial carrier F17E5.2 OS=Caenorhabditis elegans GN=F17E5.2 PE=3 SV=4 Back     alignment and function description
>sp|Q9BV35|SCMC3_HUMAN Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2 Back     alignment and function description
>sp|Q6NYZ6|SCM2A_DANRE Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1 Back     alignment and function description
>sp|Q628Z2|CMC3_CAEBR Probable calcium-binding mitochondrial carrier CBG00135 OS=Caenorhabditis briggsae GN=CBG00135 PE=3 SV=1 Back     alignment and function description
>sp|Q54DU1|MCFP_DICDI Mitochondrial substrate carrier family protein P OS=Dictyostelium discoideum GN=mcfP PE=3 SV=1 Back     alignment and function description
>sp|Q7T0U6|SCM1B_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-b PE=2 SV=1 Back     alignment and function description
>sp|Q66L49|SCMC1_DANRE Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query242
255537727 355 Grave disease carrier protein, putative 0.896 0.611 0.899 1e-113
225426016 354 PREDICTED: mitochondrial substrate carri 0.900 0.615 0.913 1e-113
118489131 354 unknown [Populus trichocarpa x Populus d 0.896 0.612 0.889 1e-111
224053799 354 predicted protein [Populus trichocarpa] 0.896 0.612 0.889 1e-111
225454464 354 PREDICTED: mitochondrial substrate carri 0.900 0.615 0.876 1e-111
224130494 354 predicted protein [Populus trichocarpa] 0.900 0.615 0.858 1e-110
449432098 354 PREDICTED: mitochondrial substrate carri 0.900 0.615 0.876 1e-110
224075076 354 predicted protein [Populus trichocarpa] 0.896 0.612 0.885 1e-110
224067958 354 predicted protein [Populus trichocarpa] 0.900 0.615 0.858 1e-109
356495713330 PREDICTED: mitochondrial substrate carri 0.896 0.657 0.876 1e-109
>gi|255537727|ref|XP_002509930.1| Grave disease carrier protein, putative [Ricinus communis] gi|223549829|gb|EEF51317.1| Grave disease carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  412 bits (1058), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/218 (89%), Positives = 210/218 (96%), Gaps = 1/218 (0%)

Query: 25  EAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEG 84
           +A+LTP+LRLGAGACAGIIAMSATYPMDMVRGRLTVQTE SPRQY+GIFHAL+TVL+EEG
Sbjct: 139 DAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEASPRQYKGIFHALSTVLKEEG 198

Query: 85  PRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAA 144
           PR+LY+GWLPSVIGV+PYVGLNFAVYESLKDWL+KSK  GLV DN ELGVATRLACGAAA
Sbjct: 199 PRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLKSKPFGLVQDN-ELGVATRLACGAAA 257

Query: 145 GTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGA 204
           GTVGQTVAYPLDVIRRRMQM GWKDAASV+TGDGKTKA LEY GMVDAFRKTVRHEGFGA
Sbjct: 258 GTVGQTVAYPLDVIRRRMQMVGWKDAASVITGDGKTKAPLEYTGMVDAFRKTVRHEGFGA 317

Query: 205 LYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD 242
           LYKGLVPNSVKVVPSIAIAFVTYE+VKD+LGVE+RISD
Sbjct: 318 LYKGLVPNSVKVVPSIAIAFVTYELVKDVLGVEVRISD 355




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426016|ref|XP_002273414.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis vinifera] gi|297742308|emb|CBI34457.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|118489131|gb|ABK96372.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|224053799|ref|XP_002297985.1| predicted protein [Populus trichocarpa] gi|222845243|gb|EEE82790.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225454464|ref|XP_002280675.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis vinifera] gi|297745401|emb|CBI40481.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224130494|ref|XP_002320851.1| predicted protein [Populus trichocarpa] gi|222861624|gb|EEE99166.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449432098|ref|XP_004133837.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] gi|449480266|ref|XP_004155845.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224075076|ref|XP_002304548.1| predicted protein [Populus trichocarpa] gi|222841980|gb|EEE79527.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224067958|ref|XP_002302618.1| predicted protein [Populus trichocarpa] gi|222844344|gb|EEE81891.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356495713|ref|XP_003516718.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query242
UNIPROTKB|Q6I583355 OSJNBa0009C07.13 "Putative per 0.892 0.608 0.735 1.5e-81
UNIPROTKB|Q5PQ27327 slc25a42 "Mitochondrial coenzy 0.537 0.397 0.431 2.6e-32
UNIPROTKB|F1NH71300 SLC25A42 "Uncharacterized prot 0.537 0.433 0.417 6.8e-30
ZFIN|ZDB-GENE-060825-313326 slc25a42 "solute carrier famil 0.537 0.398 0.410 3.7e-29
UNIPROTKB|Q05AQ3327 slc25a42 "Mitochondrial coenzy 0.347 0.256 0.517 1.3e-28
FB|FBgn0052103583 CG32103 [Drosophila melanogast 0.830 0.344 0.333 8.7e-28
WB|WBGene00008924531 F17E5.2 [Caenorhabditis elegan 0.834 0.380 0.331 9.6e-28
DICTYBASE|DDB_G0292034297 mcfP "putative mitochondrial c 0.747 0.609 0.355 1.3e-27
TAIR|locus:2157423487 APC2 "ATP/phosphate carrier 2" 0.553 0.275 0.359 1.6e-27
UNIPROTKB|E1BW83475 SLC25A24 "Uncharacterized prot 0.545 0.277 0.323 1.1e-26
UNIPROTKB|Q6I583 OSJNBa0009C07.13 "Putative peroxisomal Ca-dependent solute carrier" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
 Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
 Identities = 161/219 (73%), Positives = 183/219 (83%)

Query:    24 KEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREE 83
             ++A+L+P+LRLGAGACAGIIAMSATYPMDMVRGR+TVQTEKSP QYRG+FHAL +V REE
Sbjct:   140 EDAQLSPLLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALGSVYREE 199

Query:    84 GPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLXXXXX 143
             G R+LY+GWLPSVIGV+PYVGLNFAVYESLKDWL+++    L  DN EL V TRL     
Sbjct:   200 GFRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLQTNPYDLGKDN-ELHVVTRLGCGAV 258

Query:   144 XXXXXXXXXYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFG 203
                      YPLDVIRRRMQM GW +AAS+VTG+GK    L+YNGM+DAFRKTVR+EG G
Sbjct:   259 AGTIGQTVAYPLDVIRRRMQMVGWNNAASIVTGEGKE--ALQYNGMIDAFRKTVRYEGVG 316

Query:   204 ALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD 242
             ALYKGLVPNSVKVVPSIAIAFVTYE V+ +LGVEMRISD
Sbjct:   317 ALYKGLVPNSVKVVPSIAIAFVTYEFVQKVLGVEMRISD 355


GO:0005634 "nucleus" evidence=IC
UNIPROTKB|Q5PQ27 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|F1NH71 SLC25A42 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060825-313 slc25a42 "solute carrier family 25, member 42" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q05AQ3 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
FB|FBgn0052103 CG32103 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00008924 F17E5.2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0292034 mcfP "putative mitochondrial coenzyme A transporter" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2157423 APC2 "ATP/phosphate carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1BW83 SLC25A24 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04619ADNT1_ARATHNo assigned EC number0.81610.91730.6306yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query242
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-32
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-28
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-25
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-12
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 6e-06
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score =  113 bits (286), Expect = 1e-32
 Identities = 38/95 (40%), Positives = 54/95 (56%)

Query: 27  ELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPR 86
            L+ +  L AG  AG IA + TYP+D+V+ RL        R+Y+GI      + +EEG R
Sbjct: 2   PLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIR 61

Query: 87  SLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSK 121
            LYKG LP+++ V P   + F  YE+LK  L+K  
Sbjct: 62  GLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 242
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0752 320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0762 311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0770 353 consensus Predicted mitochondrial carrier protein 100.0
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 99.97
KOG0036463 consensus Predicted mitochondrial carrier protein 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.97
KOG0765333 consensus Predicted mitochondrial carrier protein 99.97
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.97
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.97
KOG0036463 consensus Predicted mitochondrial carrier protein 99.97
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.96
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.96
KOG0770353 consensus Predicted mitochondrial carrier protein 99.96
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.95
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.95
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.94
KOG0769308 consensus Predicted mitochondrial carrier protein 99.94
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.94
KOG0765333 consensus Predicted mitochondrial carrier protein 99.94
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.93
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.92
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.9
KOG0766297 consensus Predicted mitochondrial carrier protein 99.82
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.81
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.8
KOG2745321 consensus Mitochondrial carrier protein [General f 99.79
KOG1519297 consensus Predicted mitochondrial carrier protein 99.79
KOG2954427 consensus Mitochondrial carrier protein [General f 99.66
KOG2745321 consensus Mitochondrial carrier protein [General f 99.56
KOG1519297 consensus Predicted mitochondrial carrier protein 99.22
KOG2954427 consensus Mitochondrial carrier protein [General f 98.55
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=2.6e-42  Score=280.91  Aligned_cols=216  Identities=48%  Similarity=0.827  Sum_probs=184.1

Q ss_pred             HHHHhhhhhhhhHHHhhcccccCcchHHHHHHHHHHHHHHHHhhchHHHHHHHHhccccCCCCCcCcHHHHHHHHHHhcC
Q 026187            5 ALALSQTQQSSSLVMRKHLKEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEG   84 (242)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lag~~a~~~~~~i~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~i~~~~G   84 (242)
                      |.-|..+++.++... ..++....++..+++||++||+++.++++|||++|+|+-++.+..  .|+++.+++++|+++||
T Consensus       102 avqf~aye~~k~~~~-~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~--~y~~l~~a~~~I~~~eG  178 (320)
T KOG0752|consen  102 AVQFSAYEQYKKLVL-GVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELK--VYRGLLHAFKTIYREEG  178 (320)
T ss_pred             hhhhhHHHHhhhhhh-ccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccc--cCCcHHHHHHHHHHhcc
Confidence            456777888877532 223333789999999999999999999999999999999887644  69999999999999999


Q ss_pred             ccccccchhhhhhhhchhhhhHHHHHHHHHHHHHhhhccCCCCCCCchhHHHHHHHHhHHHHHHHhhcccHHHHHHHhhh
Q 026187           85 PRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQM  164 (242)
Q Consensus        85 ~~gly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~iktr~q~  164 (242)
                      ++|||||+.|++++.+|+.++.|.+||.+|++....     .......+.+..+++|++||+++..++||+|+||.|||+
T Consensus       179 i~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~-----~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~  253 (320)
T KOG0752|consen  179 IRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLK-----SSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQL  253 (320)
T ss_pred             hhhhhcCcchhhheehhhhhhHHHHHHHHHHhhccc-----ccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhc
Confidence            999999999999999999999999999999962111     112235678899999999999999999999999999999


Q ss_pred             cCcccccccccCCCCcccccccCcHHHHHHHHHHhhhhhhhccChhhhhhhhhhhhhhHHHHHHHHHHHhcccc
Q 026187          165 AGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEM  238 (242)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~gly~G~~~~~~~~~~~~~i~~~~y~~l~~~~~~~~  238 (242)
                      ......          ....+++++++|+++|+++||+.|||||+.|.+++.+|..++.|.+||.+|+++....
T Consensus       254 ~~~~~~----------~~~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~~~~  317 (320)
T KOG0752|consen  254 GGLKYF----------GGGFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLRLLK  317 (320)
T ss_pred             cCcccc----------ccccccccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhhccc
Confidence            875411          1123568999999999999999999999999999999999999999999998886543



>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query242
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-18
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 1e-17
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 28/208 (13%) Query: 34 LGAGACAGIIAMSATYPMDMVRGRLTVQTEK-------SPRQYRGIFHALTTVLREEGPR 86 LGAG A IA T+P+D + RL +Q E + QYRG+ + T++R EGPR Sbjct: 6 LGAGT-AACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPR 64 Query: 87 SLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLXXXXXXXX 146 SLY G + + + + + +Y+S+K + K + G+ +RL Sbjct: 65 SLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKG--------SEHAGIGSRLLAGSTTGA 116 Query: 147 XXXXXXYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALY 206 P DV++ R Q A G G+ Y V+A++ R EG L+ Sbjct: 117 LAVAVAQPTDVVKVRFQ-------AQARAGGGR-----RYQSTVEAYKTIAREEGIRGLW 164 Query: 207 KGLVPNSVKVVPSIAIAFVTYEMVKDIL 234 KG PN + VTY+++KD L Sbjct: 165 KGTSPNVARNAIVNCAELVTYDLIKDTL 192
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query242
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-84
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-55
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-22
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-46
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-44
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 3e-18
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-18
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  251 bits (642), Expect = 7e-84
 Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 23/216 (10%)

Query: 21  KHLKEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEK--SPRQYRGIFHALTT 78
              K+        L +G  AG  ++   YP+D  R RL     K  + R++ G+ + +T 
Sbjct: 103 DRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITK 162

Query: 79  VLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRL 138
           + + +G R LY+G+  SV G+I Y    F VY++ K  L          D   + +    
Sbjct: 163 IFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGML---------PDPKNVHIIVSW 213

Query: 139 ACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVR 198
                   V   V+YP D +RRRM M             G+  A + Y G VD +RK  +
Sbjct: 214 MIAQTVTAVAGLVSYPFDTVRRRMMMQS-----------GRKGADIMYTGTVDCWRKIAK 262

Query: 199 HEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDIL 234
            EG  A +KG   N ++ +   A   V Y+ +K  +
Sbjct: 263 DEGPKAFFKGAWSNVLRGMGG-AFVLVLYDEIKKFV 297


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query242
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=1.5e-41  Score=282.55  Aligned_cols=210  Identities=25%  Similarity=0.367  Sum_probs=181.4

Q ss_pred             HHHHHhhhhhhhhHHHhhcccccCcchHHHHHHHHHHHHHHHHhhchHHHHHHHHhccccC-CCCCcCcHHHHHHHHHHh
Q 026187            4 IALALSQTQQSSSLVMRKHLKEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEK-SPRQYRGIFHALTTVLRE   82 (242)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lag~~a~~~~~~i~~Pld~ik~~~q~~~~~-~~~~~~~~~~~~~~i~~~   82 (242)
                      .++.|..++..++.+....   ...+....+++|++||+++.++++|+|+||+|+|++... ...+|++.++++++|+++
T Consensus        81 ~~i~f~~ye~~k~~~~~~~---~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~  157 (303)
T 2lck_A           81 ASVRIGLYDSVKQFYTKGS---EHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIARE  157 (303)
T ss_dssp             HHHTTTHHHHHHHHHSCCC---SSCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCC---cCCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHh
Confidence            4566777777777653321   146678899999999999999999999999999998643 345789999999999999


Q ss_pred             cCccccccchhhhhhhhchhhhhHHHHHHHHHHHHHhhhccCCCCCCCchhHHHHHHHHhHHHHHHHhhcccHHHHHHHh
Q 026187           83 EGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRM  162 (242)
Q Consensus        83 ~G~~gly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~iktr~  162 (242)
                      ||++|||||+.+++++.++..+++|.+||.+|+.+.+..       ....+....+++|++||++++++++|+|+||+|+
T Consensus       158 eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~-------~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrl  230 (303)
T 2lck_A          158 EGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAN-------LMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRY  230 (303)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTT-------SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            999999999999999999999999999999999876431       1133466789999999999999999999999999


Q ss_pred             hhcCcccccccccCCCCcccccccCcHHHHHHHHHHhhhhhhhccChhhhhhhhhhhhhhHHHHHHHHHHHhccccc
Q 026187          163 QMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMR  239 (242)
Q Consensus       163 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~gly~G~~~~~~~~~~~~~i~~~~y~~l~~~~~~~~~  239 (242)
                      |++..                ..|.++++|+++|+++||++|||||+.|+++|.+|..+++|.+||.+|+++.+..+
T Consensus       231 q~~~~----------------~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~~~~  291 (303)
T 2lck_A          231 MNSAL----------------GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQ  291 (303)
T ss_dssp             TTCCS----------------SSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred             Hhccc----------------cccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcc
Confidence            99752                25899999999999999999999999999999999999999999999998866543



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 242
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-27
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-18
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score =  103 bits (257), Expect = 4e-27
 Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 23/197 (11%)

Query: 36  AGACAGIIAMSATYPMDMVRGRLTVQTEKSP--RQYRGIFHALTTVLREEGPRSLYKGWL 93
           +G  AG  ++   YP+D  R RL     K    R++ G+ + +T + + +G R LY+G+ 
Sbjct: 117 SGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFN 176

Query: 94  PSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAY 153
            SV G+I Y    F VY++ K           + D   + +            V   V+Y
Sbjct: 177 VSVQGIIIYRAAYFGVYDTAKGM---------LPDPKNVHIIVSWMIAQTVTAVAGLVSY 227

Query: 154 PLDVIRRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNS 213
           P D +RRRM M             G+  A + Y G VD +RK  + EG  A +KG   N 
Sbjct: 228 PFDTVRRRMMMQS-----------GRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNV 276

Query: 214 VKVVPSIAIAFVTYEMV 230
           ++ +   A   V Y+ +
Sbjct: 277 LRGMGG-AFVLVLYDEI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query242
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=8.5e-35  Score=238.41  Aligned_cols=201  Identities=28%  Similarity=0.403  Sum_probs=174.2

Q ss_pred             cCcchHHHHHHHHHHHHHHHHhhchHHHHHHHHhccccC----CCCCcCcHHHHHHHHHHhcCccccccchhhhhhhhch
Q 026187           26 AELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEK----SPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIP  101 (242)
Q Consensus        26 ~~~~~~~~~lag~~a~~~~~~i~~Pld~ik~~~q~~~~~----~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~  101 (242)
                      +.++..+.+++|++|++++.+++||||+||+|+|++...    ....+++++++++++++++|+++||+|+.+.+++..+
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            345778899999999999999999999999999998653    2356899999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHhhhccCCCCCCCchhHHHHHHHHhHHHHHHHhhcccHHHHHHHhhhcCcccccccccCCCCcc
Q 026187          102 YVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTK  181 (242)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~iktr~q~~~~~~~~~~~~~~~~~~  181 (242)
                      ...++|..|+.+++.+.+....   ...........+.+|.+|++++.++++|+|++|+|+|.+.....           
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~-----------  147 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDR---HKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGA-----------  147 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCT---TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSST-----------
T ss_pred             ccchhHHHHHHHHHHHhccccc---ccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccc-----------
Confidence            9999999999999988765221   12223345667889999999999999999999999999764322           


Q ss_pred             cccccCcHHHHHHHHHHhhhhhhhccChhhhhhhhhhhhhhHHHHHHHHHHHhcccccc
Q 026187          182 ATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRI  240 (242)
Q Consensus       182 ~~~~~~~~~~~~~~i~~~~Gi~gly~G~~~~~~~~~~~~~i~~~~y~~l~~~~~~~~~~  240 (242)
                      ....|.+.++++++++++||+++||+|+.+++++.+++++++|..||.+|+.+.+..+.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~  206 (292)
T d1okca_         148 AQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNV  206 (292)
T ss_dssp             TTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGCS
T ss_pred             cccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccccccc
Confidence            23468899999999999999999999999999999999999999999999988766543



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure