Citrus Sinensis ID: 026191

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240--
MQMISRASSAAMASFTCSRGQSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASRSLRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVFFPSEDNVSAR
cccHHHHcccccccccccccccccEEcccccHHHccccHHHHHHHHcccHHHHHHHHHcccccccccccccccccEEEEEEccccccEEEEEEEcccccEEEEccccHHHHHHHHHHccccccEEEEcccccccccHHHHHHHHcccEEEEEcccccccccccEEcccccEEEEccEEEEEEEccccccccEEEEEccccEEEEccccccccccccccccHHHHHHHHHHHccccccEEccc
ccHHHHHHHHHHHccccccccccccccccHHHHHHcccHHHcHEEEEEccHHHHHcccccccccccccccccccccEEEEEEEcccEEEEEEEcccccEEEEEccccHHHHHHHHHHcccEEEEEEcccccHHHHccHHHHHHHcccEEEEcccccccccccEEEEccccEEEEccEEEEEEEcccccccEEEEEEccccEEEEccHHHEccccccccccHHHHHHHHHHHccccccEEccc
MQMISRASSAAMASFtcsrgqsglcvvpgprqlclrKGLLYGFMRLLSMPFKTLHLASRSLRVAEFCSISNMSSSLQIELVPCLRDNYAYLlhdmdtgtvgvvdpseavpvIDALSRKNRNLTYILNThhhhdhtggnlelkarygakvigsgvdkdripgidivlndgdkwmfaghevhvidtpghtrghisfyfpgsaavftgdtlfslscgklfegtpgqlIVYVTdvffpsednvsar
MQMISRASSAAMASFTCSRGQSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASRSLRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNLELKARYGAKVIgsgvdkdripGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVffpsednvsar
MQMIsrassaamasFTCSRGQSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASRSLRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIlnthhhhdhtggnlELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVFFPSEDNVSAR
**************FTCSRGQSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASRSLRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYI***************LKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVFF*********
***************************PGPRQLCLRKGLLYGFMRLLSMPFK***********************LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVFFPSEDNVS**
*******************GQSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASRSLRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVFFPSEDNVSAR
*********************SGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLAS*S*************SSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVFFPSEDNVSA*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQMISRASSAAMASFTCSRGQSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASRSLRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVFFPSEDNVSAR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query242 2.2.26 [Sep-21-2011]
O24495331 Hydroxyacylglutathione hy no no 0.987 0.722 0.698 3e-96
Q8LDW8331 Probable hydroxyacylgluta yes no 0.975 0.712 0.697 8e-96
Q9SID3324 Hydroxyacylglutathione hy no no 0.933 0.697 0.701 3e-92
Q4FP49239 Hydroxyacylglutathione hy yes no 0.615 0.623 0.563 4e-45
Q2JVC3252 Hydroxyacylglutathione hy yes no 0.619 0.595 0.536 2e-42
Q60BX0256 Hydroxyacylglutathione hy yes no 0.615 0.582 0.503 2e-41
Q2JPX4252 Hydroxyacylglutathione hy yes no 0.619 0.595 0.523 6e-40
P05446255 Hydroxyacylglutathione hy N/A no 0.648 0.615 0.471 7e-39
Q2RP80256 Hydroxyacylglutathione hy yes no 0.623 0.589 0.503 3e-38
Q5N5S6258 Hydroxyacylglutathione hy yes no 0.619 0.581 0.490 6e-38
>sp|O24495|GLO2M_ARATH Hydroxyacylglutathione hydrolase 1, mitochondrial OS=Arabidopsis thaliana GN=GLX2-1 PE=2 SV=2 Back     alignment and function desciption
 Score =  351 bits (901), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 169/242 (69%), Positives = 192/242 (79%), Gaps = 3/242 (1%)

Query: 1   MQMISRASSAAMASF--TCSRGQSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLAS 58
           M +IS+ASS    S   +CSR    LCV PG RQLCLRK LLYG M LLSMP KTL  A 
Sbjct: 1   MPVISKASSTTTNSSIPSCSRIGGQLCVWPGLRQLCLRKSLLYGVMWLLSMPLKTLRGAR 60

Query: 59  RSLRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRK 118
           ++L++  FCSISNM SSL+IELVPC +DNYAYLLHD DTGTVGVVDPSEA PVI+ALSRK
Sbjct: 61  KTLKITHFCSISNMPSSLKIELVPCSKDNYAYLLHDEDTGTVGVVDPSEAAPVIEALSRK 120

Query: 119 NRNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHE 178
           N NLTYILNTHHH DH GGN ELK RYGAKVIGS VDKDRIPGIDI+L D DKWMFAGHE
Sbjct: 121 NWNLTYILNTHHHDDHIGGNAELKERYGAKVIGSAVDKDRIPGIDILLKDSDKWMFAGHE 180

Query: 179 VHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVF-FPSED 237
           V ++DTPGHT+GHISFYFPGSA +FTGD ++SLSCG L EGTP Q++  +  +   P + 
Sbjct: 181 VRILDTPGHTQGHISFYFPGSATIFTGDLIYSLSCGTLSEGTPEQMLSSLQKIVSLPDDT 240

Query: 238 NV 239
           N+
Sbjct: 241 NI 242
Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: 6
>sp|Q8LDW8|GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplast OS=Arabidopsis thaliana GN=GLX2-4 PE=2 SV=1 Back     alignment and function description
>sp|Q9SID3|GLO2N_ARATH Hydroxyacylglutathione hydrolase 2, mitochondrial OS=Arabidopsis thaliana GN=At2g31350 PE=1 SV=1 Back     alignment and function description
>sp|Q4FP49|GLO2_PELUB Hydroxyacylglutathione hydrolase OS=Pelagibacter ubique (strain HTCC1062) GN=gloB PE=3 SV=1 Back     alignment and function description
>sp|Q2JVC3|GLO2_SYNJA Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain JA-3-3Ab) GN=gloB PE=3 SV=1 Back     alignment and function description
>sp|Q60BX0|GLO2_METCA Hydroxyacylglutathione hydrolase OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) GN=gloB PE=3 SV=1 Back     alignment and function description
>sp|Q2JPX4|GLO2_SYNJB Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=gloB PE=3 SV=1 Back     alignment and function description
>sp|P05446|GLO2_RHOBL Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas blastica GN=gloB PE=3 SV=1 Back     alignment and function description
>sp|Q2RP80|GLO2_RHORT Hydroxyacylglutathione hydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=gloB PE=3 SV=1 Back     alignment and function description
>sp|Q5N5S6|GLO2_SYNP6 Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gloB PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query242
224133230328 predicted protein [Populus trichocarpa] 0.983 0.725 0.775 1e-106
118485019328 unknown [Populus trichocarpa] 0.983 0.725 0.775 1e-106
255577183291 hydroxyacylglutathione hydrolase, putati 0.983 0.817 0.804 1e-105
359806489329 uncharacterized protein LOC100816314 [Gl 0.975 0.717 0.801 1e-105
224093054328 predicted protein [Populus trichocarpa] 0.983 0.725 0.8 1e-104
225433992329 PREDICTED: probable hydroxyacylglutathio 0.983 0.723 0.804 1e-104
225433994321 PREDICTED: probable hydroxyacylglutathio 0.954 0.719 0.787 1e-100
449468882328 PREDICTED: probable hydroxyacylglutathio 0.983 0.725 0.762 1e-99
449484776328 PREDICTED: probable hydroxyacylglutathio 0.983 0.725 0.762 1e-99
363806954315 uncharacterized protein LOC100819370 [Gl 0.904 0.695 0.809 1e-97
>gi|224133230|ref|XP_002327992.1| predicted protein [Populus trichocarpa] gi|222837401|gb|EEE75780.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/240 (77%), Positives = 210/240 (87%), Gaps = 2/240 (0%)

Query: 1   MQMISRASSAAMASFTCSRGQSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASRS 60
           MQMIS+AS  AMAS  CSR +SG+ V PG RQL LRK ++YGFMRLLS PFKTL  ASR+
Sbjct: 1   MQMISKAS-CAMASLPCSRVRSGIRVRPGTRQLSLRKVIVYGFMRLLSTPFKTLRGASRT 59

Query: 61  LRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNR 120
           L+VA+FCS+SNMSSSLQIELVPCL+DNYAYLLHD+DTGTVGV+DPSEA PVIDALSRKNR
Sbjct: 60  LKVAQFCSVSNMSSSLQIELVPCLKDNYAYLLHDVDTGTVGVIDPSEAAPVIDALSRKNR 119

Query: 121 NLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVH 180
           NLTYILNTHHH+DHTGGN ELKARYGAKVIGSGVD+DRIPGIDIVLNDGD WMF GHEV 
Sbjct: 120 NLTYILNTHHHYDHTGGNEELKARYGAKVIGSGVDRDRIPGIDIVLNDGDNWMFGGHEVL 179

Query: 181 VIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVF-FPSEDNV 239
           V++TPGHTRGH+SFYFPGS A+F GDTLFSLSCGKLFEGTP Q++  +  +   P + N+
Sbjct: 180 VMETPGHTRGHVSFYFPGSGAIFAGDTLFSLSCGKLFEGTPEQMLSSLRKIMSLPDDTNI 239

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|118485019|gb|ABK94374.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255577183|ref|XP_002529474.1| hydroxyacylglutathione hydrolase, putative [Ricinus communis] gi|223531032|gb|EEF32884.1| hydroxyacylglutathione hydrolase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359806489|ref|NP_001241253.1| uncharacterized protein LOC100816314 [Glycine max] gi|255645837|gb|ACU23409.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224093054|ref|XP_002309787.1| predicted protein [Populus trichocarpa] gi|118483171|gb|ABK93490.1| unknown [Populus trichocarpa] gi|118485660|gb|ABK94680.1| unknown [Populus trichocarpa] gi|222852690|gb|EEE90237.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225433992|ref|XP_002271795.1| PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225433994|ref|XP_002271863.1| PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449468882|ref|XP_004152150.1| PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449484776|ref|XP_004156976.1| PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|363806954|ref|NP_001242566.1| uncharacterized protein LOC100819370 [Glycine max] gi|255636437|gb|ACU18557.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query242
TAIR|locus:2058239331 GLX2-1 "glyoxalase 2-1" [Arabi 0.925 0.676 0.671 1e-77
TAIR|locus:2198851331 GLX2-4 "glyoxalase 2-4" [Arabi 0.983 0.719 0.618 1.3e-75
TAIR|locus:2061270324 GLX2-5 "glyoxalase 2-5" [Arabi 0.966 0.722 0.604 2.5e-72
TIGR_CMR|SPO_3168255 SPO_3168 "hydroxyacylglutathio 0.615 0.584 0.429 1.8e-30
UNIPROTKB|Q0BWR4256 gloB "Hydroxyacylglutathione h 0.611 0.578 0.386 1.2e-24
TAIR|locus:2103232258 GLY2 [Arabidopsis thaliana (ta 0.603 0.565 0.365 4.9e-21
UNIPROTKB|P0AC84251 gloB "glyoxalase II" [Escheric 0.599 0.577 0.342 5.1e-19
MGI|MGI:95745309 Hagh "hydroxyacyl glutathione 0.632 0.495 0.345 5.8e-18
RGD|2779309 Hagh "hydroxyacyl glutathione 0.822 0.644 0.320 5.8e-18
UNIPROTKB|O35952309 Hagh "Hydroxyacylglutathione h 0.822 0.644 0.320 5.8e-18
TAIR|locus:2058239 GLX2-1 "glyoxalase 2-1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
 Identities = 151/225 (67%), Positives = 172/225 (76%)

Query:    16 TCSRGQSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASRSLRVAEFCSISNMSSS 75
             +CSR    LCV PG RQLCLRK LLYG M LLSMP KTL  A ++L++  FCSISNM SS
Sbjct:    18 SCSRIGGQLCVWPGLRQLCLRKSLLYGVMWLLSMPLKTLRGARKTLKITHFCSISNMPSS 77

Query:    76 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXX 135
             L+IELVPC +DNYAYLLHD DTGTVGVVDPSEA PVI+ALSRKN NLTYI          
Sbjct:    78 LKIELVPCSKDNYAYLLHDEDTGTVGVVDPSEAAPVIEALSRKNWNLTYILNTHHHDDHI 137

Query:   136 XXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFY 195
                 ELK RYGAKVIGS VDKDRIPGIDI+L D DKWMFAGHEV ++DTPGHT+GHISFY
Sbjct:   138 GGNAELKERYGAKVIGSAVDKDRIPGIDILLKDSDKWMFAGHEVRILDTPGHTQGHISFY 197

Query:   196 FPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVF-FPSEDNV 239
             FPGSA +FTGD ++SLSCG L EGTP Q++  +  +   P + N+
Sbjct:   198 FPGSATIFTGDLIYSLSCGTLSEGTPEQMLSSLQKIVSLPDDTNI 242
GO:0004416 "hydroxyacylglutathione hydrolase activity" evidence=IEA;IDA
GO:0005739 "mitochondrion" evidence=ISM
GO:0008270 "zinc ion binding" evidence=IEA
GO:0008800 "beta-lactamase activity" evidence=IEA;IDA
GO:0009507 "chloroplast" evidence=ISM
GO:0016787 "hydrolase activity" evidence=IEA
GO:0017001 "antibiotic catabolic process" evidence=IEA
GO:0046872 "metal ion binding" evidence=IDA
GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA;TAS
GO:0048573 "photoperiodism, flowering" evidence=RCA
GO:0005737 "cytoplasm" evidence=NAS
TAIR|locus:2198851 GLX2-4 "glyoxalase 2-4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061270 GLX2-5 "glyoxalase 2-5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_3168 SPO_3168 "hydroxyacylglutathione hydrolase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|Q0BWR4 gloB "Hydroxyacylglutathione hydrolase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] Back     alignment and assigned GO terms
TAIR|locus:2103232 GLY2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P0AC84 gloB "glyoxalase II" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
MGI|MGI:95745 Hagh "hydroxyacyl glutathione hydrolase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|2779 Hagh "hydroxyacyl glutathione hydrolase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|O35952 Hagh "Hydroxyacylglutathione hydrolase, mitochondrial" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q4FP49GLO2_PELUB3, ., 1, ., 2, ., 60.56370.61570.6234yesno
Q8LDW8GLO2D_ARATH3, ., 1, ., 2, ., 60.69740.97520.7129yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.20.963
3rd Layer3.1.2.60.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query242
PLN02398329 PLN02398, PLN02398, hydroxyacylglutathione hydrola 1e-164
TIGR03413248 TIGR03413, GSH_gloB, hydroxyacylglutathione hydrol 2e-75
PLN02469258 PLN02469, PLN02469, hydroxyacylglutathione hydrola 2e-40
PRK10241251 PRK10241, PRK10241, hydroxyacylglutathione hydrola 6e-39
smart00849177 smart00849, Lactamase_B, Metallo-beta-lactamase su 2e-31
COG0491252 COG0491, GloB, Zn-dependent hydrolases, including 4e-26
pfam00753148 pfam00753, Lactamase_B, Metallo-beta-lactamase sup 1e-21
PLN02962251 PLN02962, PLN02962, hydroxyacylglutathione hydrola 1e-10
COG0426 388 COG0426, FpaA, Uncharacterized flavoproteins [Ener 6e-04
PRK00685228 PRK00685, PRK00685, metal-dependent hydrolase; Pro 0.002
>gnl|CDD|215223 PLN02398, PLN02398, hydroxyacylglutathione hydrolase Back     alignment and domain information 
 Score =  457 bits (1177), Expect = e-164
 Identities = 190/225 (84%), Positives = 205/225 (91%), Gaps = 2/225 (0%)

Query: 1   MQMISRASSAAMASFTCSR-GQSGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASR 59
           MQMIS+ASSA M+SF CSR  +  LCV PG RQLCLRK LLYG M+LLSMP KTL  A R
Sbjct: 1   MQMISKASSA-MSSFRCSRRIRGQLCVRPGVRQLCLRKSLLYGVMKLLSMPLKTLRGAGR 59

Query: 60  SLRVAEFCSISNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKN 119
           +L+VA+FCS+SN+SSSLQIELVPCL+DNYAYLLHD DTGTVGVVDPSEAVPVIDALSRKN
Sbjct: 60  TLKVAQFCSVSNVSSSLQIELVPCLKDNYAYLLHDEDTGTVGVVDPSEAVPVIDALSRKN 119

Query: 120 RNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEV 179
           RNLTYILNTHHH+DHTGGNLELKARYGAKVIGS VDKDRIPGIDIVL DGDKWMFAGHEV
Sbjct: 120 RNLTYILNTHHHYDHTGGNLELKARYGAKVIGSAVDKDRIPGIDIVLKDGDKWMFAGHEV 179

Query: 180 HVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQL 224
            V++TPGHTRGHISFYFPGS A+FTGDTLFSLSCGKLFEGTP Q+
Sbjct: 180 LVMETPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGTPEQM 224

Length = 329
>gnl|CDD|234201 TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase Back     alignment and domain information
>gnl|CDD|178088 PLN02469, PLN02469, hydroxyacylglutathione hydrolase Back     alignment and domain information
>gnl|CDD|182327 PRK10241, PRK10241, hydroxyacylglutathione hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|214854 smart00849, Lactamase_B, Metallo-beta-lactamase superfamily Back     alignment and domain information
>gnl|CDD|223565 COG0491, GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only] Back     alignment and domain information
>gnl|CDD|216099 pfam00753, Lactamase_B, Metallo-beta-lactamase superfamily Back     alignment and domain information
>gnl|CDD|178547 PLN02962, PLN02962, hydroxyacylglutathione hydrolase Back     alignment and domain information
>gnl|CDD|223503 COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|234811 PRK00685, PRK00685, metal-dependent hydrolase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 242
PLN02398329 hydroxyacylglutathione hydrolase 100.0
PLN02469258 hydroxyacylglutathione hydrolase 100.0
TIGR03413248 GSH_gloB hydroxyacylglutathione hydrolase. Members 100.0
PRK10241251 hydroxyacylglutathione hydrolase; Provisional 99.97
KOG0813265 consensus Glyoxylase [General function prediction 99.96
PLN02962251 hydroxyacylglutathione hydrolase 99.96
COG0491252 GloB Zn-dependent hydrolases, including glyoxylase 99.86
PRK11921 394 metallo-beta-lactamase/flavodoxin domain-containin 99.85
smart00849183 Lactamase_B Metallo-beta-lactamase superfamily. Ap 99.84
PRK05452 479 anaerobic nitric oxide reductase flavorubredoxin; 99.82
KOG0814237 consensus Glyoxylase [General function prediction 99.81
PF00753194 Lactamase_B: Metallo-beta-lactamase superfamily; I 99.79
COG0426 388 FpaA Uncharacterized flavoproteins [Energy product 99.75
TIGR00649 422 MG423 conserved hypothetical protein. Contains an 99.72
PRK11539755 ComEC family competence protein; Provisional 99.69
TIGR00361662 ComEC_Rec2 DNA internalization-related competence 99.67
COG2333293 ComEC Predicted hydrolase (metallo-beta-lactamase 99.66
PF14597199 Lactamase_B_5: Metallo-beta-lactamase superfamily; 99.66
TIGR03675 630 arCOG00543 arCOG00543 universal archaeal KH-domain 99.47
COG0595 555 mRNA degradation ribonucleases J1/J2 (metallo-beta 99.44
PRK00685228 metal-dependent hydrolase; Provisional 99.4
TIGR03307238 PhnP phosphonate metabolism protein PhnP. This fam 99.37
PRK11244250 phnP carbon-phosphorus lyase complex accessory pro 99.36
PRK04286298 hypothetical protein; Provisional 99.35
PRK02113252 putative hydrolase; Provisional 99.33
PRK02126 334 ribonuclease Z; Provisional 99.3
PRK05184302 pyrroloquinoline quinone biosynthesis protein PqqB 99.28
TIGR02108302 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B. 99.26
TIGR02651 299 RNase_Z ribonuclease Z. Processing of the 3-prime 99.22
PF12706194 Lactamase_B_2: Beta-lactamase superfamily domain; 99.21
COG1782 637 Predicted metal-dependent RNase, consists of a met 99.2
TIGR02649 303 true_RNase_BN ribonuclease BN. Members of this pro 99.19
COG1236 427 YSH1 Predicted exonuclease of the beta-lactamase f 99.19
COG1237259 Metal-dependent hydrolases of the beta-lactamase s 99.06
PRK00055270 ribonuclease Z; Reviewed 99.01
KOG1136 501 consensus Predicted cleavage and polyadenylation s 98.92
PRK11709355 putative L-ascorbate 6-phosphate lactonase; Provis 98.89
COG2015 655 Alkyl sulfatase and related hydrolases [Secondary 98.87
PF13483163 Lactamase_B_3: Beta-lactamase superfamily domain; 98.74
COG2220258 Predicted Zn-dependent hydrolases of the beta-lact 98.41
KOG1137 668 consensus mRNA cleavage and polyadenylation factor 98.38
KOG1135 764 consensus mRNA cleavage and polyadenylation factor 98.31
COG1234 292 ElaC Metal-dependent hydrolases of the beta-lactam 98.27
KOG4736302 consensus Uncharacterized conserved protein [Funct 98.26
COG1235269 PhnP Metal-dependent hydrolases of the beta-lactam 98.16
COG2248304 Predicted hydrolase (metallo-beta-lactamase superf 98.14
TIGR02650 277 RNase_Z_T_toga ribonuclease Z, Thermotoga type. Me 98.03
KOG1361 481 consensus Predicted hydrolase involved in interstr 97.33
PF02112 335 PDEase_II: cAMP phosphodiesterases class-II; Inter 96.77
KOG2121 746 consensus Predicted metal-dependent hydrolase (bet 92.47
COG5212 356 PDE1 Low-affinity cAMP phosphodiesterase [Signal t 91.55
PF14234285 DUF4336: Domain of unknown function (DUF4336) 91.34
KOG3798343 consensus Predicted Zn-dependent hydrolase (beta-l 91.29
PF1369163 Lactamase_B_4: tRNase Z endonuclease 91.18
KOG3592 934 consensus Microtubule-associated proteins [Cytoske 85.06
>PLN02398 hydroxyacylglutathione hydrolase Back     alignment and domain information 
Probab=100.00  E-value=7.2e-45  Score=316.81  Aligned_cols=237  Identities=81%  Similarity=1.276  Sum_probs=220.9

Q ss_pred             CchhhhhhhcceeeeeeccCC-CccccCCCccceeccCceeeeeehhccCCcccccccccceeeeeeeecccCCccceEE
Q 026191            1 MQMISRASSAAMASFTCSRGQ-SGLCVVPGPRQLCLRKGLLYGFMRLLSMPFKTLHLASRSLRVAEFCSISNMSSSLQIE   79 (242)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~v~~~~~~~~~~~~~~i~   79 (242)
                      |||||-||| +++...|++.+ +..+.+|..|+.+.+++++++.+.++.+|+++..+.++...+.+++....++..+++.
T Consensus         1 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   79 (329)
T PLN02398          1 MQMISKASS-AMSSFRCSRRIRGQLCVRPGVRQLCLRKSLLYGVMKLLSMPLKTLRGAGRTLKVAQFCSVSNVSSSLQIE   79 (329)
T ss_pred             Ccchhhhhh-ccccCcchhhhcCcccccchhhhhhcccchhHHHHHHHhCchhhccccchhhhhhhhhcccCCCCCcEEE
Confidence            899999999 78888887766 7788999999999999999999999999999999999999999998877787789999


Q ss_pred             EeccccceeEEEEEECCCCeEEEEcCCCcHHHHHHHHcCCCCccEEEcCCCCCCccCChHHHHHhcCCEEEeccccccCC
Q 026191           80 LVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVDKDRI  159 (242)
Q Consensus        80 ~~~~~~~~~~~lI~~~d~g~~~liD~g~~~~~~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~  159 (242)
                      .+|.+.+||+|||.+++++++++|||+..+.+++++++.+.+|++|++||.|+||+||+.++.+.++++||++..+.+.+
T Consensus        80 ~ip~l~dNy~Yli~d~~t~~~~vVDP~~a~~vl~~l~~~g~~L~~ILlTH~H~DH~GG~~~L~~~~ga~V~g~~~~~~~i  159 (329)
T PLN02398         80 LVPCLKDNYAYLLHDEDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHYDHTGGNLELKARYGAKVIGSAVDKDRI  159 (329)
T ss_pred             EEeeeCceEEEEEEECCCCEEEEEcCCCHHHHHHHHHhcCCCceEEEECCCCchhhCCHHHHHHhcCCEEEEehHHhhhc
Confidence            99999999999999877889999999999999999999999999999999999999999999999999999998877777


Q ss_pred             CCccEEecCCCEEEECCeEEEEEEcCCCCCCCEEEEeCCCcEEEEcccccccccCCCCCCCHHHHHHHHHHhcCCCCCC
Q 026191          160 PGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVFFPSEDN  238 (242)
Q Consensus       160 ~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~gs~~~~~~~~~vlftGD~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~  238 (242)
                      +..+..+.+|+.+.+|+.+++++++||||+||++|++++.++||+||++|..++|++++++.++|++|++++.++.++.
T Consensus       160 ~~~d~~v~dGd~i~lgg~~l~vi~tPGHT~GhI~~~~~~~~vLFtGDtLf~~g~Gr~feg~~~~~~~SL~rL~~L~~~t  238 (329)
T PLN02398        160 PGIDIVLKDGDKWMFAGHEVLVMETPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGTPEQMLSSLQKIISLPDDT  238 (329)
T ss_pred             cCCcEEeCCCCEEEECCeEEEEEeCCCcCCCCEEEEECCCCEEEECCCcCCCCcCCCCCCCHHHHHHHHHHHHcCCCCe
Confidence            7778899999999999999999999999999999999888899999999999999999999999999999999876654

>PLN02469 hydroxyacylglutathione hydrolase Back     alignment and domain information
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase Back     alignment and domain information
>PRK10241 hydroxyacylglutathione hydrolase; Provisional Back     alignment and domain information
>KOG0813 consensus Glyoxylase [General function prediction only] Back     alignment and domain information
>PLN02962 hydroxyacylglutathione hydrolase Back     alignment and domain information
>COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] Back     alignment and domain information
>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional Back     alignment and domain information
>smart00849 Lactamase_B Metallo-beta-lactamase superfamily Back     alignment and domain information
>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional Back     alignment and domain information
>KOG0814 consensus Glyoxylase [General function prediction only] Back     alignment and domain information
>PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain [] Back     alignment and domain information
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] Back     alignment and domain information
>TIGR00649 MG423 conserved hypothetical protein Back     alignment and domain information
>PRK11539 ComEC family competence protein; Provisional Back     alignment and domain information
>TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2 Back     alignment and domain information
>COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>PF14597 Lactamase_B_5: Metallo-beta-lactamase superfamily; PDB: 2P97_B Back     alignment and domain information
>TIGR03675 arCOG00543 arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein Back     alignment and domain information
>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair] Back     alignment and domain information
>PRK00685 metal-dependent hydrolase; Provisional Back     alignment and domain information
>TIGR03307 PhnP phosphonate metabolism protein PhnP Back     alignment and domain information
>PRK11244 phnP carbon-phosphorus lyase complex accessory protein; Provisional Back     alignment and domain information
>PRK04286 hypothetical protein; Provisional Back     alignment and domain information
>PRK02113 putative hydrolase; Provisional Back     alignment and domain information
>PRK02126 ribonuclease Z; Provisional Back     alignment and domain information
>PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional Back     alignment and domain information
>TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B Back     alignment and domain information
>TIGR02651 RNase_Z ribonuclease Z Back     alignment and domain information
>PF12706 Lactamase_B_2: Beta-lactamase superfamily domain; PDB: 3BV6_F 1WW1_A 2E7Y_A 3RPC_D 3ZWF_A 3JXP_A 1XTO_A 2CBN_A 3G1P_B 3P2U_A Back     alignment and domain information
>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] Back     alignment and domain information
>TIGR02649 true_RNase_BN ribonuclease BN Back     alignment and domain information
>COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] Back     alignment and domain information
>PRK00055 ribonuclease Z; Reviewed Back     alignment and domain information
>KOG1136 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification] Back     alignment and domain information
>PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional Back     alignment and domain information
>COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A Back     alignment and domain information
>COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only] Back     alignment and domain information
>KOG1137 consensus mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) [RNA processing and modification] Back     alignment and domain information
>KOG1135 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT2 (CPSF subunit) [RNA processing and modification] Back     alignment and domain information
>COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] Back     alignment and domain information
>KOG4736 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] Back     alignment and domain information
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type Back     alignment and domain information
>KOG1361 consensus Predicted hydrolase involved in interstrand cross-link repair [Replication, recombination and repair] Back     alignment and domain information
>PF02112 PDEase_II: cAMP phosphodiesterases class-II; InterPro: IPR000396 Cyclic-AMP phosphodiesterase (3 Back     alignment and domain information
>KOG2121 consensus Predicted metal-dependent hydrolase (beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>COG5212 PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms] Back     alignment and domain information
>PF14234 DUF4336: Domain of unknown function (DUF4336) Back     alignment and domain information
>KOG3798 consensus Predicted Zn-dependent hydrolase (beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>PF13691 Lactamase_B_4: tRNase Z endonuclease Back     alignment and domain information
>KOG3592 consensus Microtubule-associated proteins [Cytoskeleton] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query242
1xm8_A254 X-Ray Structure Of Glyoxalase Ii From Arabidopsis T 6e-65
2qed_A258 Crystal Structure Of Salmonella Thyphimurium Lt2 Gl 5e-16
1qh3_A260 Human Glyoxalase Ii With Cacodylate And Acetate Ion 2e-15
2p18_A311 Crystal Structure Of The Leishmania Infantum Glyoxa 1e-12
2xf4_A210 Crystal Structure Of Salmonella Enterica Serovar Ty 4e-05
2zwr_A207 Crystal Structure Of Ttha1623 From Thermus Thermoph 2e-04
>pdb|1XM8|A Chain A, X-Ray Structure Of Glyoxalase Ii From Arabidopsis Thaliana Gene At2g31350 Length = 254 Back     alignment and structure 
Iteration: 1

 Score =  243 bits (621), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 111/156 (71%), Positives = 126/156 (80%)
Query: 76  LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXX 135
           +QIELVPCL+DNYAY+LHD DTGTVGVVDPSEA P+ID+L R  RNLTYI          
Sbjct: 1   MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHT 60
Query: 136 XXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFY 195
               ELK RYGAKVIGS +DKDRIPGID+ L DGDKWMFAGHEVHV+DTPGHT+GHIS Y
Sbjct: 61  GGNLELKDRYGAKVIGSAMDKDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLY 120
Query: 196 FPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDV 231
           FPGS A+FTGDT+FSLSCGKLFEGTP Q++  +  +
Sbjct: 121 FPGSRAIFTGDTMFSLSCGKLFEGTPKQMLASLQKI 156
>pdb|2QED|A Chain A, Crystal Structure Of Salmonella Thyphimurium Lt2 Glyoxalase Ii Length = 258 Back     alignment and structure
>pdb|1QH3|A Chain A, Human Glyoxalase Ii With Cacodylate And Acetate Ions Present In The Active Site Length = 260 Back     alignment and structure
>pdb|2P18|A Chain A, Crystal Structure Of The Leishmania Infantum Glyoxalase Ii Length = 311 Back     alignment and structure
>pdb|2XF4|A Chain A, Crystal Structure Of Salmonella Enterica Serovar Typhimurium Ycbl Length = 210 Back     alignment and structure
>pdb|2ZWR|A Chain A, Crystal Structure Of Ttha1623 From Thermus Thermophilus Hb8 Length = 207 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query242
1xm8_A254 Glyoxalase II; structural genomics, protein struct 7e-93
2qed_A258 Hydroxyacylglutathione hydrolase; metallo-B- super 6e-86
1qh5_A260 Glyoxalase II, protein (hydroxyacylglutathione hyd 2e-85
2p18_A311 Glyoxalase II; metalloprotein, beta sandwich, alph 2e-81
2zwr_A207 Metallo-beta-lactamase superfamily protein; hydrol 7e-45
2xf4_A210 Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A 8e-44
1k07_A263 FEZ-1 beta-lactamase; monomer with alpha-beta/BETA 9e-34
3m8t_A294 'BLR6230 protein; subclass B3 beta-lactamase, zinc 2e-33
1jjt_A228 IMP-1 metallo beta-lactamase; metallo-beta-lactama 1e-32
3r2u_A 466 Metallo-beta-lactamase family protein; structural 1e-28
1sml_A269 Protein (penicillinase); metallo-beta-lactamase, a 3e-28
2gcu_A245 Putative hydroxyacylglutathione hydrolase 3; ethyl 9e-28
4ad9_A289 Lactb2, beta-lactamase-like protein 2; hydrolase, 5e-27
2p97_A201 Hypothetical protein; putative metal-dependent hyd 2e-26
3tp9_A 474 Beta-lactamase and rhodanese domain protein; struc 2e-26
3adr_A261 Putative uncharacterized protein ST1585; quorum se 5e-26
4efz_A298 Metallo-beta-lactamase family protein; structural 2e-23
1a7t_A232 Metallo-beta-lactamase; hydrolase (beta-lactamase) 6e-22
4ax1_B303 Metallo-beta-lactamase AIM-1; hydrolase, antibioti 1e-21
3l6n_A219 Metallo-beta-lactamase; zinc, hydolase, antibiotic 6e-20
2vw8_A303 PA1000, PQSE; quinolone signal response protein, s 1e-19
1m2x_A223 Class B carbapenemase BLAB-1; alpha-beta/BETA-alph 5e-19
2y8b_A265 Metallo-B-lactamase; hydrolase, cephalosporins, an 1e-18
1mqo_A227 Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd 1e-17
2zo4_A317 Metallo-beta-lactamase family protein; hydrolase; 7e-17
1ztc_A221 Hypothetical protein TM0894; structural genomics, 2e-15
3iog_A227 Beta-lactamase; hydrolase, antibiotic resistance, 6e-15
3q6v_A233 Beta-lactamase; metalloenzyme, alpha-beta, hydrola 1e-14
4eyb_A270 Beta-lactamase NDM-1; metallo beta lactamase, anti 2e-14
2fhx_A246 SPM-1; metallo-beta-lactamase, dinuclear zinc, ant 7e-13
3dha_A254 N-acyl homoserine lactone hydrolase; zinc bimetall 2e-10
3esh_A280 Protein similar to metal-dependent hydrolase; stru 4e-08
1p9e_A331 Methyl parathion hydrolase; Zn containing; 2.40A { 3e-07
3aj3_A274 MLR6805 protein, 4-pyridoxolactonase; Zn-protein, 4e-07
2ohh_A 404 Type A flavoprotein FPRA; beta-lactamase like doma 2e-06
2q9u_A 414 A-type flavoprotein; flavodoxin like, beta lactama 3e-06
2r2d_A276 AGR_PTI_140P, Zn-dependent hydrolases; lactonase, 6e-06
1e5d_A 402 Rubredoxin\:oxygen oxidoreductase; oxygenreductase 3e-05
3hnn_A262 Putative diflavin flavoprotein A 5; PSI-2, protein 9e-05
3kl7_A235 Putative metal-dependent hydrolase; structural gen 6e-04
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A Length = 254 Back     alignment and structure
 Score =  272 bits (698), Expect = 7e-93
 Identities = 124/149 (83%), Positives = 137/149 (91%)

Query: 76  LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHT 135
           +QIELVPCL+DNYAY+LHD DTGTVGVVDPSEA P+ID+L R  RNLTYILNTHHH+DHT
Sbjct: 1   MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHT 60

Query: 136 GGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFY 195
           GGNLELK RYGAKVIGS +DKDRIPGID+ L DGDKWMFAGHEVHV+DTPGHT+GHIS Y
Sbjct: 61  GGNLELKDRYGAKVIGSAMDKDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLY 120

Query: 196 FPGSAAVFTGDTLFSLSCGKLFEGTPGQL 224
           FPGS A+FTGDT+FSLSCGKLFEGTP Q+
Sbjct: 121 FPGSRAIFTGDTMFSLSCGKLFEGTPKQM 149
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 Length = 258 Back     alignment and structure
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* Length = 260 Back     alignment and structure
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* Length = 311 Back     alignment and structure
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A Length = 207 Back     alignment and structure
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} Length = 210 Back     alignment and structure
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A Length = 263 Back     alignment and structure
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A Length = 294 Back     alignment and structure
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A Length = 228 Back     alignment and structure
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Length = 466 Back     alignment and structure
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Length = 269 Back     alignment and structure
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} Length = 245 Back     alignment and structure
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} Length = 289 Back     alignment and structure
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 Length = 201 Back     alignment and structure
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474 Back     alignment and structure
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} Length = 261 Back     alignment and structure
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} Length = 298 Back     alignment and structure
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* Length = 232 Back     alignment and structure
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B Length = 303 Back     alignment and structure
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} Length = 219 Back     alignment and structure
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* Length = 303 Back     alignment and structure
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 Length = 223 Back     alignment and structure
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A Length = 265 Back     alignment and structure
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... Length = 227 Back     alignment and structure
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} Length = 317 Back     alignment and structure
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 Length = 221 Back     alignment and structure
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A Length = 227 Back     alignment and structure
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A Length = 233 Back     alignment and structure
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Length = 270 Back     alignment and structure
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} Length = 246 Back     alignment and structure
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A Length = 254 Back     alignment and structure
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} Length = 280 Back     alignment and structure
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 Length = 331 Back     alignment and structure
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A Length = 274 Back     alignment and structure
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* Length = 404 Back     alignment and structure
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Length = 414 Back     alignment and structure
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} Length = 276 Back     alignment and structure
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 Length = 402 Back     alignment and structure
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503} Length = 235 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query242
1xm8_A254 Glyoxalase II; structural genomics, protein struct 100.0
1qh5_A260 Glyoxalase II, protein (hydroxyacylglutathione hyd 99.97
2qed_A258 Hydroxyacylglutathione hydrolase; metallo-B- super 99.97
2p18_A311 Glyoxalase II; metalloprotein, beta sandwich, alph 99.97
4efz_A298 Metallo-beta-lactamase family protein; structural 99.96
2gcu_A245 Putative hydroxyacylglutathione hydrolase 3; ethyl 99.96
2xf4_A210 Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A 99.95
2zwr_A207 Metallo-beta-lactamase superfamily protein; hydrol 99.95
3r2u_A 466 Metallo-beta-lactamase family protein; structural 99.95
3tp9_A 474 Beta-lactamase and rhodanese domain protein; struc 99.94
2zo4_A317 Metallo-beta-lactamase family protein; hydrolase; 99.94
3l6n_A219 Metallo-beta-lactamase; zinc, hydolase, antibiotic 99.93
1m2x_A223 Class B carbapenemase BLAB-1; alpha-beta/BETA-alph 99.93
4hl2_A243 Beta-lactamase NDM-1; structural genomics, PSI-bio 99.93
4ad9_A289 Lactb2, beta-lactamase-like protein 2; hydrolase, 99.93
1a7t_A232 Metallo-beta-lactamase; hydrolase (beta-lactamase) 99.93
2fhx_A246 SPM-1; metallo-beta-lactamase, dinuclear zinc, ant 99.93
4eyb_A270 Beta-lactamase NDM-1; metallo beta lactamase, anti 99.92
3m8t_A294 'BLR6230 protein; subclass B3 beta-lactamase, zinc 99.92
1jjt_A228 IMP-1 metallo beta-lactamase; metallo-beta-lactama 99.92
3iog_A227 Beta-lactamase; hydrolase, antibiotic resistance, 99.92
1k07_A263 FEZ-1 beta-lactamase; monomer with alpha-beta/BETA 99.92
1mqo_A227 Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd 99.91
3hnn_A262 Putative diflavin flavoprotein A 5; PSI-2, protein 99.91
4ax1_B303 Metallo-beta-lactamase AIM-1; hydrolase, antibioti 99.91
2y8b_A265 Metallo-B-lactamase; hydrolase, cephalosporins, an 99.91
2vw8_A303 PA1000, PQSE; quinolone signal response protein, s 99.91
3q6v_A233 Beta-lactamase; metalloenzyme, alpha-beta, hydrola 99.9
1sml_A269 Protein (penicillinase); metallo-beta-lactamase, a 99.9
2p97_A201 Hypothetical protein; putative metal-dependent hyd 99.9
2ohh_A 404 Type A flavoprotein FPRA; beta-lactamase like doma 99.88
3dha_A254 N-acyl homoserine lactone hydrolase; zinc bimetall 99.87
3adr_A261 Putative uncharacterized protein ST1585; quorum se 99.86
4dik_A 410 Flavoprotein; TM0755, electron transport, DI-iron 99.86
2cfu_A 658 SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1 99.86
1ycg_A 398 Nitric oxide reductase; DIIRON site, oxidoreductas 99.85
1e5d_A 402 Rubredoxin\:oxygen oxidoreductase; oxygenreductase 99.85
2q9u_A 414 A-type flavoprotein; flavodoxin like, beta lactama 99.85
3esh_A280 Protein similar to metal-dependent hydrolase; stru 99.84
3aj3_A274 MLR6805 protein, 4-pyridoxolactonase; Zn-protein, 99.84
2r2d_A276 AGR_PTI_140P, Zn-dependent hydrolases; lactonase, 99.82
1p9e_A331 Methyl parathion hydrolase; Zn containing; 2.40A { 99.82
2yhe_A 668 SEC-alkyl sulfatase; hydrolase, inversion, metallo 99.69
1ztc_A221 Hypothetical protein TM0894; structural genomics, 99.81
1zkp_A268 Hypothetical protein BA1088; zinc binding protein, 99.73
3zq4_A 555 Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat 99.73
3bk2_A 562 RNAse J, metal dependent hydrolase; endoribonuclea 99.72
3iek_A 431 Ribonuclease TTHA0252; metallo beta lactamase fold 99.68
3g1p_A258 Protein PHNP; C-P lyase, phosphodiesterase, phosph 99.66
2bib_A 547 CBPE, teichoic acid phosphorylcholine esterase/ ch 99.64
2xr1_A 640 Cleavage and polyadenylation specificity factor 1 99.63
2ycb_A 636 Beta-CAsp RNAse, cleavage and polyadenylation spec 99.63
2i7t_A 459 Cleavage and polyadenylation specificity factor 73 99.63
3af5_A 651 Putative uncharacterized protein PH1404; archaeal 99.63
3md7_A293 Beta-lactamase-like; ssgcid, hydrolase, structural 99.62
2i7x_A 717 Protein CFT2; polyadenylation, metallo-B-lactamase 99.6
2az4_A 429 Hypothetical protein EF2904; structural genomics, 99.6
2e7y_A280 TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, 99.58
1y44_A 320 Ribonuclease Z; zinc-dependent metal hydrolase, hy 99.57
2cbn_A 306 Ribonuclease Z; phosphodiesterase beta lactamase t 99.54
3kl7_A235 Putative metal-dependent hydrolase; structural gen 99.5
2wyl_A360 L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 99.39
3zwf_A 368 Zinc phosphodiesterase ELAC protein 1; beta-lactam 99.37
3jxp_A321 Coenzyme PQQ synthesis protein B; alpha-beta prote 99.37
4b87_A 367 DNA cross-LINK repair 1A protein; dclre1A, DCLRE, 99.34
3bv6_A379 Metal-dependent hydrolase; metallo protein, beta-l 99.33
3rpc_A264 Possible metal-dependent hydrolase; structural gen 99.24
3zdk_A 336 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A 99.2
1vjn_A220 Zn-dependent hydrolase of metallo-beta-lactamase s 99.14
2p4z_A284 Metal-dependent hydrolases of the beta-lactamase s 99.02
3h3e_A267 Uncharacterized protein TM1679; structural genomic 98.8
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A Back     alignment and structure
Probab=100.00  E-value=5.6e-33  Score=235.16  Aligned_cols=163  Identities=77%  Similarity=1.299  Sum_probs=148.2

Q ss_pred             ceEEEeccccceeEEEEEECCCCeEEEEcCCCcHHHHHHHHcCCCCccEEEcCCCCCCccCChHHHHHhcCCEEEecccc
Q 026191           76 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVD  155 (242)
Q Consensus        76 ~~i~~~~~~~~~~~~lI~~~d~g~~~liD~g~~~~~~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~~~~~i~~~~~~  155 (242)
                      |++..++.++.||+|||.++++++.++||+|....+.+.|++.|.+|++|++||.|+||+||+..+.+.++++||+++.+
T Consensus         1 m~i~~~~~~~~n~~yli~~~~~~~~~lID~g~~~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~v~~~~~~   80 (254)
T 1xm8_A            1 MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMD   80 (254)
T ss_dssp             CEEEEEEETTTEEEEEEECTTTCCEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHHCCEEEEEGGG
T ss_pred             CEEEEecccCCeEEEEEEECCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEECCCCCcccccHHHHHHHcCCeEEEchhh
Confidence            46777788888889999976567899999998888889999888899999999999999999999999889999999988


Q ss_pred             ccCCCCccEEecCCCEEEECCeEEEEEEcCCCCCCCEEEEeCCCcEEEEcccccccccCCCCCCCHHHHHHHHHHhcCCC
Q 026191          156 KDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVFFPS  235 (242)
Q Consensus       156 ~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~gs~~~~~~~~~vlftGD~~~~~~~~~~~~~~~~~~~~sl~~l~~~~  235 (242)
                      .+.++.....+.+|+.+.+|+.+++++++||||+||+++++++.++||+||+++..++|++++++.++|.+|+++++.+.
T Consensus        81 ~~~~~~~~~~~~~g~~~~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~l~~~~~g~~~~~~~~~~~~Sl~~l~~l~  160 (254)
T 1xm8_A           81 KDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSLSCGKLFEGTPKQMLASLQKITSLP  160 (254)
T ss_dssp             GGGSTTEEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEGGGTEEEEETTEETTEECCCSSSCHHHHHHHHHHHHTSC
T ss_pred             hhcCCCCceeeCCCCEEEECCEEEEEEECCCCCCCcEEEEECCCCEEEEcCccccCCCCCCCCCCHHHHHHHHHHHHccC
Confidence            87777777889999999999999999999999999999999888999999999998888888999999999999998876


Q ss_pred             CCC
Q 026191          236 EDN  238 (242)
Q Consensus       236 ~~~  238 (242)
                      ++.
T Consensus       161 ~~~  163 (254)
T 1xm8_A          161 DDT  163 (254)
T ss_dssp             TTC
T ss_pred             CCc
Confidence            653
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* Back     alignment and structure
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 Back     alignment and structure
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* Back     alignment and structure
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} Back     alignment and structure
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} Back     alignment and structure
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} Back     alignment and structure
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A Back     alignment and structure
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Back     alignment and structure
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} Back     alignment and structure
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0 Back     alignment and structure
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 Back     alignment and structure
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Back     alignment and structure
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} Back     alignment and structure
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* Back     alignment and structure
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} Back     alignment and structure
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Back     alignment and structure
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A Back     alignment and structure
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A Back     alignment and structure
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A Back     alignment and structure
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A Back     alignment and structure
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... Back     alignment and structure
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B Back     alignment and structure
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A Back     alignment and structure
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* Back     alignment and structure
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A Back     alignment and structure
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Back     alignment and structure
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 Back     alignment and structure
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* Back     alignment and structure
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A Back     alignment and structure
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} Back     alignment and structure
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A* Back     alignment and structure
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A* Back     alignment and structure
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* Back     alignment and structure
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 Back     alignment and structure
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Back     alignment and structure
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} Back     alignment and structure
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A Back     alignment and structure
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} Back     alignment and structure
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 Back     alignment and structure
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP} Back     alignment and structure
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 Back     alignment and structure
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 Back     alignment and structure
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis} Back     alignment and structure
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A* Back     alignment and structure
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A* Back     alignment and structure
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A Back     alignment and structure
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A* Back     alignment and structure
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} Back     alignment and structure
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A Back     alignment and structure
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* Back     alignment and structure
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A* Back     alignment and structure
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10 Back     alignment and structure
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10 Back     alignment and structure
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A Back     alignment and structure
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* Back     alignment and structure
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 Back     alignment and structure
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A* Back     alignment and structure
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens} Back     alignment and structure
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A Back     alignment and structure
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens} Back     alignment and structure
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor} Back     alignment and structure
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula} Back     alignment and structure
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens} Back     alignment and structure
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4 Back     alignment and structure
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} Back     alignment and structure
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 242
d1xm8a_254 d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathio 4e-53
d2qeda1251 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglut 9e-33
d1qh5a_260 d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathio 8e-31
d1k07a_262 d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoriba 1e-15
d2gmna1264 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Br 3e-14
d2aioa1266 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xa 5e-14
d2p97a1200 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 2e-13
d1ycga2249 d.157.1.3 (A:2-250) Nitric oxide reductase N-termi 2e-13
d1e5da2249 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreducta 5e-13
d1jjta_220 d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomo 6e-12
d1vmea2250 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, 5e-11
d1mqoa_221 d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus 4e-10
d1ko3a_230 d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomo 4e-10
d2q0ia1298 d.157.1.14 (A:1-298) Quinolone signal response pro 6e-10
d1x8ha_228 d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromona 6e-08
d1znba_230 d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroi 4e-06
d2cfua2 505 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudo 1e-05
d2az4a1183 d.157.1.10 (A:56-238) Hypothetical protein EF2904 3e-05
d1ztca1207 d.157.1.11 (A:1-207) Hypothetical protein TM0894 { 4e-05
d1m2xa_219 d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseob 8e-05
d2dkfa1 431 d.157.1.10 (A:1-431) Putative RNA-degradation prot 6e-04
>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 254 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Glyoxalase II (hydroxyacylglutathione hydrolase)
domain: Glyoxalase II (hydroxyacylglutathione hydrolase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  170 bits (430), Expect = 4e-53
 Identities = 124/148 (83%), Positives = 136/148 (91%)

Query: 76  LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHT 135
           +QIELVPCL+DNYAY+LHD DTGTVGVVDPSEA P+ID+L R  RNLTYILNTHHH+DHT
Sbjct: 1   MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHT 60

Query: 136 GGNLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFY 195
           GGNLELK RYGAKVIGS +DKDRIPGID+ L DGDKWMFAGHEVHV+DTPGHT+GHIS Y
Sbjct: 61  GGNLELKDRYGAKVIGSAMDKDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLY 120

Query: 196 FPGSAAVFTGDTLFSLSCGKLFEGTPGQ 223
           FPGS A+FTGDT+FSLSCGKLFEGTP Q
Sbjct: 121 FPGSRAIFTGDTMFSLSCGKLFEGTPKQ 148
>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} Length = 251 Back     information, alignment and structure
>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} Length = 260 Back     information, alignment and structure
>d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} Length = 262 Back     information, alignment and structure
>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Length = 264 Back     information, alignment and structure
>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} Length = 266 Back     information, alignment and structure
>d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} Length = 200 Back     information, alignment and structure
>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} Length = 249 Back     information, alignment and structure
>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} Length = 249 Back     information, alignment and structure
>d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} Length = 220 Back     information, alignment and structure
>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 250 Back     information, alignment and structure
>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} Length = 221 Back     information, alignment and structure
>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} Length = 230 Back     information, alignment and structure
>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} Length = 298 Back     information, alignment and structure
>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} Length = 228 Back     information, alignment and structure
>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} Length = 230 Back     information, alignment and structure
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Length = 505 Back     information, alignment and structure
>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} Length = 183 Back     information, alignment and structure
>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} Length = 207 Back     information, alignment and structure
>d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} Length = 219 Back     information, alignment and structure
>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Length = 431 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query242
d1xm8a_254 Glyoxalase II (hydroxyacylglutathione hydrolase) { 100.0
d2qeda1251 Glyoxalase II (hydroxyacylglutathione hydrolase) { 100.0
d1qh5a_260 Glyoxalase II (hydroxyacylglutathione hydrolase) { 100.0
d2q0ia1298 Quinolone signal response protein PqsE {Pseudomona 99.92
d1k07a_262 Zn metallo-beta-lactamase {Fluoribacter gormanii, 99.92
d2gmna1264 Zn metallo-beta-lactamase {Bradyrhizobium japonicu 99.91
d1x8ha_228 Zn metallo-beta-lactamase {Aeromonas hydrophila, C 99.91
d1mqoa_221 Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 99.91
d2aioa1266 Zn metallo-beta-lactamase {Xanthomonas maltophilia 99.91
d1jjta_220 Zn metallo-beta-lactamase {Pseudomonas aeruginosa, 99.9
d1m2xa_219 Zn metallo-beta-lactamase {Chryseobacterium mening 99.88
d1ko3a_230 Zn metallo-beta-lactamase {Pseudomonas aeruginosa, 99.88
d1e5da2249 Rubredoxin oxygen:oxidoreductase (ROO), N-terminal 99.88
d1znba_230 Zn metallo-beta-lactamase {Bacteroides fragilis [T 99.87
d1ycga2249 Nitric oxide reductase N-terminal domain {Moorella 99.87
d2p97a1200 Hypothetical protein Ava3068 {Anabaena variabilis 99.86
d2cfua2 505 Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI 99.84
d1p9ea_294 Methyl parathion hydrolase {Pseudomonas sp. WBC-3 99.8
d1ztca1207 Hypothetical protein TM0894 {Thermotoga maritima [ 99.78
d1vmea2250 ROO-like flavoprotein TM0755, N-terminal domain {T 99.77
d2dkfa1 431 Putative RNA-degradation protein TTHA0252 {Thermus 99.62
d1wraa1305 Teichoic acid phosphorylcholine esterase Pce (LytD 99.58
d2i7xa1 514 Cleavage factor two protein 2, CFT2 {Baker's yeast 99.53
d2i7ta1 451 Cleavage and polyadenylation specificity factor su 99.52
d1zkpa1244 Hypothetical protein BA1088 (BAS1016) {Bacillus an 99.51
d2az4a1183 Hypothetical protein EF2904 {Enterococcus faecalis 99.48
d1y44a1 307 Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId 99.1
d2cbna1 305 Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 99.1
d1vjna_209 Hypothetical protein TM0207 {Thermotoga maritima [ 98.79
d1xtoa_304 Coenzyme PQQ synthesis protein B, PqqB {Pseudomona 98.75
d2e7ya1 280 Ribonuclease Z (RNase Z) {Thermotoga maritima [Tax 98.43
>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Glyoxalase II (hydroxyacylglutathione hydrolase)
domain: Glyoxalase II (hydroxyacylglutathione hydrolase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.3e-37  Score=258.77  Aligned_cols=164  Identities=76%  Similarity=1.289  Sum_probs=155.0

Q ss_pred             ceEEEeccccceeEEEEEECCCCeEEEEcCCCcHHHHHHHHcCCCCccEEEcCCCCCCccCChHHHHHhcCCEEEecccc
Q 026191           76 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHDHTGGNLELKARYGAKVIGSGVD  155 (242)
Q Consensus        76 ~~i~~~~~~~~~~~~lI~~~d~g~~~liD~g~~~~~~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~~~~~i~~~~~~  155 (242)
                      |+|..+|++++|++|||.+++++++++|||+..+.+++++++.|.++.+|++||.|+||++|+..+.+.++++++.+..+
T Consensus         1 M~i~~ip~~~dNy~Yli~d~~t~~avvIDPg~~~~i~~~l~~~~~~l~~Il~TH~H~DH~~g~~~l~~~~~~~v~~~~~~   80 (254)
T d1xm8a_           1 MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMD   80 (254)
T ss_dssp             CEEEEEEETTTEEEEEEECTTTCCEEEECCSSHHHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHHCCEEEEEGGG
T ss_pred             CEEEEEeeeccEEEEEEEECCCCEEEEECCCCcHHHHHHHHHCCCceeEEecccCcccccCchHHHHhhcCCcEEecccc
Confidence            67888999999999999998888999999999888999999999999999999999999999999999999999999988


Q ss_pred             ccCCCCccEEecCCCEEEECCeEEEEEEcCCCCCCCEEEEeCCCcEEEEcccccccccCCCCCCCHHHHHHHHHHhcCCC
Q 026191          156 KDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQLIVYVTDVFFPS  235 (242)
Q Consensus       156 ~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~gs~~~~~~~~~vlftGD~~~~~~~~~~~~~~~~~~~~sl~~l~~~~  235 (242)
                      ....+..+..+++|+.+.+|+.++++++|||||+||+||++++.++|||||++|.++||+.++++.+++++||+|+..+.
T Consensus        81 ~~~~~~~~~~l~dgd~i~lg~~~i~vl~TPGHT~ghi~~~~~~~~~lftGDtLf~~g~Gr~~~g~~~~~~~sl~kl~~Lp  160 (254)
T d1xm8a_          81 KDRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSLSCGKLFEGTPKQMLASLQKITSLP  160 (254)
T ss_dssp             GGGSTTEEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEGGGTEEEEETTEETTEECCCSSSCHHHHHHHHHHHHTSC
T ss_pred             cccCCCCCEEecCCCeeeecCcEEEEeeccCCCCCceEEEEcccceEEeCCEEEeecCCccccccHHHHHHHHHHHHhCC
Confidence            88888889999999999999999999999999999999999989999999999999999999999999999999999876


Q ss_pred             CCCc
Q 026191          236 EDNV  239 (242)
Q Consensus       236 ~~~~  239 (242)
                      ++..
T Consensus       161 d~t~  164 (254)
T d1xm8a_         161 DDTS  164 (254)
T ss_dssp             TTCE
T ss_pred             cccE
Confidence            6643
>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} Back     information, alignment and structure
>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure
>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} Back     information, alignment and structure
>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} Back     information, alignment and structure
>d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} Back     information, alignment and structure
>d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} Back     information, alignment and structure
>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} Back     information, alignment and structure
>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} Back     information, alignment and structure
>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} Back     information, alignment and structure
>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} Back     information, alignment and structure
>d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} Back     information, alignment and structure
>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure