Citrus Sinensis ID: 026197


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240--
MVADSKAKSDISLAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVC
ccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHcccEEEEHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcHHHHccccHHHHHHHHHHHHccHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccc
ccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccHHcccHHHHHHHHHHHccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccHcccHHHHHHHHHHHccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccc
mvadskaksdislagtFASSAFAACFAEICTIPLDTAKVRLQLQKKavagdgvalpkykgmlgTVATIAREEGMVSLWKgivpglhrqclfgglriglyepvktlyvgkdfvgdvplsKKILAGLTTGALGIMIANPTDLVKVRLQaegklppgvprrysgalnAYSTIVKQEGFAALwtgvgpnvaRNAIINAAELASYDQVKQTIlkipgftdNVVTHLLSGLGAGFVAVCigspvdvvc
mvadskaksdislaGTFASSAFAACFAEICTIPLDTAKVRLQLQKKavagdgvalpkykGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEgklppgvprrySGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVC
MVADSKAKSDIslagtfassafaacfaEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVC
************LAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDV**
***************TFASSAFAACFAEICTIPLDTAKVRLQL****************GMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLY******GD*PLSKKILAGLTTGALGIMIANPTDLVKVRLQAEG******PRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVC
**********ISLAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVC
********SDISLAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiii
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiii
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVADSKAKSDISLAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query242 2.2.26 [Sep-21-2011]
O81845306 Mitochondrial uncoupling yes no 0.962 0.761 0.871 1e-116
Q9ZWG1305 Mitochondrial uncoupling no no 0.933 0.740 0.729 1e-103
Q9N2I9311 Mitochondrial uncoupling yes no 0.925 0.720 0.48 8e-55
P55916312 Mitochondrial uncoupling yes no 0.958 0.743 0.474 1e-54
Q3SZI5309 Mitochondrial uncoupling yes no 0.909 0.711 0.488 1e-54
P56499308 Mitochondrial uncoupling yes no 0.913 0.717 0.484 2e-54
P56501308 Mitochondrial uncoupling yes no 0.913 0.717 0.48 2e-54
Q9W720310 Mitochondrial uncoupling no no 0.909 0.709 0.473 5e-54
O97649308 Mitochondrial uncoupling yes no 0.888 0.698 0.484 6e-54
Q9W725310 Mitochondrial uncoupling N/A no 0.909 0.709 0.478 1e-53
>sp|O81845|PUMP1_ARATH Mitochondrial uncoupling protein 1 OS=Arabidopsis thaliana GN=PUMP1 PE=1 SV=1 Back     alignment and function desciption
 Score =  416 bits (1069), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/234 (87%), Positives = 217/234 (92%), Gaps = 1/234 (0%)

Query: 8   KSDISLAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVAT 67
           KSD+SL  TFA SAFAAC  E+CTIPLDTAKVRLQLQK A+AGD V LPKY+G+LGTV T
Sbjct: 6   KSDLSLPKTFACSAFAACVGEVCTIPLDTAKVRLQLQKSALAGD-VTLPKYRGLLGTVGT 64

Query: 68  IAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTT 127
           IAREEG+ SLWKG+VPGLHRQCLFGGLRIG+YEPVK LYVGKDFVGDVPLSKKILAGLTT
Sbjct: 65  IAREEGLRSLWKGVVPGLHRQCLFGGLRIGMYEPVKNLYVGKDFVGDVPLSKKILAGLTT 124

Query: 128 GALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVA 187
           GALGIM+ANPTDLVKVRLQAEGKL  G PRRYSGALNAYSTIV+QEG  ALWTG+GPNVA
Sbjct: 125 GALGIMVANPTDLVKVRLQAEGKLAAGAPRRYSGALNAYSTIVRQEGVRALWTGLGPNVA 184

Query: 188 RNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVV 241
           RNAIINAAELASYDQVK+TILKIPGFTDNVVTH+LSGLGAGF AVCIGSPVDVV
Sbjct: 185 RNAIINAAELASYDQVKETILKIPGFTDNVVTHILSGLGAGFFAVCIGSPVDVV 238




PUMPS are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation. This leads to a decrease in the efficiency of oxidative phosphorylation and an increase in heat production. Is involved in protecting plant cells against oxidative stress damage and maintaining the redox balance of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. May play a regulatory role during photorespiration.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9ZWG1|PUMP2_ARATH Mitochondrial uncoupling protein 2 OS=Arabidopsis thaliana GN=PUMP2 PE=2 SV=1 Back     alignment and function description
>sp|Q9N2I9|UCP3_CANFA Mitochondrial uncoupling protein 3 OS=Canis familiaris GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|P55916|UCP3_HUMAN Mitochondrial uncoupling protein 3 OS=Homo sapiens GN=UCP3 PE=1 SV=1 Back     alignment and function description
>sp|Q3SZI5|UCP2_BOVIN Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|P56499|UCP3_RAT Mitochondrial uncoupling protein 3 OS=Rattus norvegicus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|P56501|UCP3_MOUSE Mitochondrial uncoupling protein 3 OS=Mus musculus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|Q9W720|UCP2_DANRE Mitochondrial uncoupling protein 2 OS=Danio rerio GN=ucp2 PE=2 SV=1 Back     alignment and function description
>sp|O97649|UCP3_PIG Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|Q9W725|UCP2_CYPCA Mitochondrial uncoupling protein 2 OS=Cyprinus carpio GN=ucp2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query242
224087657305 predicted protein [Populus trichocarpa] 0.929 0.737 0.892 1e-122
356496148305 PREDICTED: mitochondrial uncoupling prot 0.913 0.724 0.858 1e-119
359806830305 uncharacterized protein LOC100809667 [Gl 0.913 0.724 0.858 1e-118
255573905305 mitochondrial uncoupling protein, putati 0.929 0.737 0.921 1e-118
388510784305 unknown [Lotus japonicus] 0.929 0.737 0.850 1e-117
357469001303 Mitochondrial uncoupling protein [Medica 0.987 0.788 0.842 1e-115
449460319304 PREDICTED: mitochondrial uncoupling prot 0.987 0.786 0.904 1e-115
224138994307 predicted protein [Populus trichocarpa] 0.929 0.732 0.883 1e-114
388496540303 unknown [Medicago truncatula] 0.987 0.788 0.834 1e-114
15232420306 uncoupling mitochondrial protein 1 [Arab 0.962 0.761 0.871 1e-114
>gi|224087657|ref|XP_002308202.1| predicted protein [Populus trichocarpa] gi|118483177|gb|ABK93493.1| unknown [Populus trichocarpa] gi|222854178|gb|EEE91725.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 215/241 (89%), Positives = 227/241 (94%)

Query: 1   MVADSKAKSDISLAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKG 60
           MVADSK KSDIS AGTFASSAFAAC AEICTIPLDTAKVRLQLQK AVAGDG+ALPKY+G
Sbjct: 1   MVADSKGKSDISFAGTFASSAFAACLAEICTIPLDTAKVRLQLQKSAVAGDGLALPKYRG 60

Query: 61  MLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKK 120
           MLGTVATIAREEG+ +LWKGIVPGLHRQC+FGGLRIGLYEPVK  YVG DFVGDVPL+KK
Sbjct: 61  MLGTVATIAREEGLSALWKGIVPGLHRQCVFGGLRIGLYEPVKNYYVGSDFVGDVPLTKK 120

Query: 121 ILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWT 180
           ILA LTTGA+GI +ANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIV+QEG  ALWT
Sbjct: 121 ILAALTTGAIGITVANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVRQEGVRALWT 180

Query: 181 GVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDV 240
           G+GPNVARNAIINAAELASYDQVKQTILKIPGFTDN+VTHL +GLGAGF AVCIGSPVDV
Sbjct: 181 GIGPNVARNAIINAAELASYDQVKQTILKIPGFTDNIVTHLFAGLGAGFFAVCIGSPVDV 240

Query: 241 V 241
           V
Sbjct: 241 V 241




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496148|ref|XP_003516932.1| PREDICTED: mitochondrial uncoupling protein 3-like [Glycine max] Back     alignment and taxonomy information
>gi|359806830|ref|NP_001241311.1| uncharacterized protein LOC100809667 [Glycine max] gi|255635380|gb|ACU18043.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|255573905|ref|XP_002527871.1| mitochondrial uncoupling protein, putative [Ricinus communis] gi|223532722|gb|EEF34502.1| mitochondrial uncoupling protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|388510784|gb|AFK43458.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|357469001|ref|XP_003604785.1| Mitochondrial uncoupling protein [Medicago truncatula] gi|355505840|gb|AES86982.1| Mitochondrial uncoupling protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|449460319|ref|XP_004147893.1| PREDICTED: mitochondrial uncoupling protein 1-like [Cucumis sativus] gi|449528798|ref|XP_004171390.1| PREDICTED: mitochondrial uncoupling protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224138994|ref|XP_002322953.1| predicted protein [Populus trichocarpa] gi|222867583|gb|EEF04714.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388496540|gb|AFK36336.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|15232420|ref|NP_190979.1| uncoupling mitochondrial protein 1 [Arabidopsis thaliana] gi|297816716|ref|XP_002876241.1| ATPUMP1/UCP1 [Arabidopsis lyrata subsp. lyrata] gi|75220127|sp|O81845.1|PUMP1_ARATH RecName: Full=Mitochondrial uncoupling protein 1; Short=AtPUMP1 gi|7673023|gb|AAF66705.1|AF146226_1 putative uncoupling protein PUMP2 [Arabidopsis thaliana] gi|3451392|emb|CAA04638.1| mitochondrial uncoupling protein [Arabidopsis thaliana] gi|4127446|emb|CAA77109.1| uncoupling protein [Arabidopsis thaliana] gi|6822057|emb|CAB70985.1| uncoupling protein (ucp/PUMP) [Arabidopsis thaliana] gi|15810467|gb|AAL07121.1| putative uncoupling protein ucp/PUMP [Arabidopsis thaliana] gi|20259563|gb|AAM14124.1| putative uncoupling protein [Arabidopsis thaliana] gi|297322079|gb|EFH52500.1| ATPUMP1/UCP1 [Arabidopsis lyrata subsp. lyrata] gi|332645668|gb|AEE79189.1| uncoupling mitochondrial protein 1 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query242
TAIR|locus:2080300306 PUMP1 "plant uncoupling mitoch 0.983 0.777 0.813 7.1e-100
TAIR|locus:2154593305 UCP2 "uncoupling protein 2" [A 0.991 0.786 0.683 5.3e-88
ZFIN|ZDB-GENE-010503-1309 ucp1 "uncoupling protein 1" [D 0.863 0.676 0.5 1.5e-49
UNIPROTKB|Q3SZI5309 UCP2 "Mitochondrial uncoupling 0.863 0.676 0.490 2e-49
UNIPROTKB|F1NPD8306 UCP3 "Uncharacterized protein" 0.871 0.689 0.495 5.2e-49
UNIPROTKB|O97562309 UCP2 "Mitochondrial uncoupling 0.863 0.676 0.486 1.1e-48
UNIPROTKB|F1PWF8309 UCP2 "Mitochondrial uncoupling 0.863 0.676 0.486 1.1e-48
ZFIN|ZDB-GENE-990708-8310 ucp2 "uncoupling protein 2" [D 0.863 0.674 0.474 1.1e-48
UNIPROTKB|P55851309 UCP2 "Mitochondrial uncoupling 0.863 0.676 0.481 2.3e-48
RGD|3933308 Ucp3 "uncoupling protein 3 (mi 0.867 0.681 0.481 3.7e-48
TAIR|locus:2080300 PUMP1 "plant uncoupling mitochondrial protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
 Identities = 196/241 (81%), Positives = 209/241 (86%)

Query:     1 MVADSKAKSDIXXXXXXXXXXXXXXXXEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKG 60
             MVA    KSD+                E+CTIPLDTAKVRLQLQK A+AGD V LPKY+G
Sbjct:     1 MVA--AGKSDLSLPKTFACSAFAACVGEVCTIPLDTAKVRLQLQKSALAGD-VTLPKYRG 57

Query:    61 MLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKK 120
             +LGTV TIAREEG+ SLWKG+VPGLHRQCLFGGLRIG+YEPVK LYVGKDFVGDVPLSKK
Sbjct:    58 LLGTVGTIAREEGLRSLWKGVVPGLHRQCLFGGLRIGMYEPVKNLYVGKDFVGDVPLSKK 117

Query:   121 ILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWT 180
             ILAGLTTGALGIM+ANPTDLVKVRLQAEGKL  G PRRYSGALNAYSTIV+QEG  ALWT
Sbjct:   118 ILAGLTTGALGIMVANPTDLVKVRLQAEGKLAAGAPRRYSGALNAYSTIVRQEGVRALWT 177

Query:   181 GVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDV 240
             G+GPNVARNAIINAAELASYDQVK+TILKIPGFTDNVVTH+LSGLGAGF AVCIGSPVDV
Sbjct:   178 GLGPNVARNAIINAAELASYDQVKETILKIPGFTDNVVTHILSGLGAGFFAVCIGSPVDV 237

Query:   241 V 241
             V
Sbjct:   238 V 238


GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=ISS;IDA
GO:0006810 "transport" evidence=ISS
GO:0006839 "mitochondrial transport" evidence=IEA
GO:0017077 "oxidative phosphorylation uncoupler activity" evidence=ISS;IDA
GO:0031966 "mitochondrial membrane" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0009853 "photorespiration" evidence=RCA;IMP
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0006007 "glucose catabolic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009749 "response to glucose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
TAIR|locus:2154593 UCP2 "uncoupling protein 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-010503-1 ucp1 "uncoupling protein 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZI5 UCP2 "Mitochondrial uncoupling protein 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NPD8 UCP3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|O97562 UCP2 "Mitochondrial uncoupling protein 2" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1PWF8 UCP2 "Mitochondrial uncoupling protein 2" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-990708-8 ucp2 "uncoupling protein 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P55851 UCP2 "Mitochondrial uncoupling protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|3933 Ucp3 "uncoupling protein 3 (mitochondrial, proton carrier)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O81845PUMP1_ARATHNo assigned EC number0.87170.96280.7614yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query242
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-24
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 8e-19
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-10
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 4e-09
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 92.3 bits (230), Expect = 3e-24
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 113 GDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQ 172
             +     +LAG   GA+   +  P D+VK RLQ       G  R+Y G L+ +  I K+
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQ---SSAAGGSRKYKGILDCFKKIYKE 57

Query: 173 EGFAALWTGVGPNVARNAIINAAELASYDQVKQTILK 209
           EG   L+ G+ PN+ R A   A    +Y+ +K+ +LK
Sbjct: 58  EGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 242
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.98
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.97
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.97
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.97
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.97
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0765333 consensus Predicted mitochondrial carrier protein 99.96
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.96
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.95
KOG0766297 consensus Predicted mitochondrial carrier protein 99.95
KOG0036463 consensus Predicted mitochondrial carrier protein 99.95
KOG0769308 consensus Predicted mitochondrial carrier protein 99.94
KOG0770353 consensus Predicted mitochondrial carrier protein 99.94
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.89
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.87
KOG2745321 consensus Mitochondrial carrier protein [General f 99.85
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.83
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.75
KOG1519297 consensus Predicted mitochondrial carrier protein 99.72
KOG1519297 consensus Predicted mitochondrial carrier protein 99.67
KOG2954427 consensus Mitochondrial carrier protein [General f 99.5
KOG2745321 consensus Mitochondrial carrier protein [General f 99.26
KOG2954427 consensus Mitochondrial carrier protein [General f 98.43
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=1.8e-48  Score=311.78  Aligned_cols=222  Identities=31%  Similarity=0.497  Sum_probs=198.7

Q ss_pred             cchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhccccccCCCccCCCCCcHHHHHHHHHHhhCccccccChhHHHHHHhh
Q 026197           11 ISLAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCL   90 (242)
Q Consensus        11 ~~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~   90 (242)
                      ......+++|++||+++.+++.|+|++|+|+|++.+..     ...++.+.+..+++++++||++|||||..+++++.++
T Consensus        25 ~~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~-----~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~p   99 (320)
T KOG0752|consen   25 ITGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPS-----KTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIP   99 (320)
T ss_pred             HHHHHHHhcchHHHHHHHHhcCchhHceEEEEeccccc-----cccccccHHHHHHHHHHHhchhhhhcCcccceeeeee
Confidence            36678889999999999999999999999999997541     2457889999999999999999999999999999999


Q ss_pred             hchhheeecHHHHhhhccCCCCCCCchHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHH
Q 026197           91 FGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIV  170 (242)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~~~~~~~~~y~~~~~~~~~i~  170 (242)
                      +..++|..||.+++.....+.....++...+++|++||+++.+++||+|++|+|+..+..     ...|+++.+++++|+
T Consensus       100 Y~avqf~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~-----~~~y~~l~~a~~~I~  174 (320)
T KOG0752|consen  100 YGAVQFSAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGE-----LKVYRGLLHAFKTIY  174 (320)
T ss_pred             cchhhhhHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecc-----cccCCcHHHHHHHHH
Confidence            999999999999986544443336788999999999999999999999999999999865     337999999999999


Q ss_pred             HhhChhhhcccchhhHHHHHHHhhhHHHHHHHHHHH-HhcCCC-CCchhHHHHHHHHHHHHHHHhhcCcccccC
Q 026197          171 KQEGFAALWTGVGPNVARNAIINAAELASYDQVKQT-ILKIPG-FTDNVVTHLLSGLGAGFVAVCIGSPVDVVC  242 (242)
Q Consensus       171 ~~~Gi~gly~G~~~~~~~~~~~~~~~~~~y~~l~~~-~~~~~~-~~~~~~~~~~~g~~a~~~~~~~~~Pldvir  242 (242)
                      ++|||+|||||+.|++++.+|+.++.|..||.+|++ ..+..+ ++.+.+..++||++||++++.++||||+||
T Consensus       175 ~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vR  248 (320)
T KOG0752|consen  175 REEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVR  248 (320)
T ss_pred             HhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHH
Confidence            999999999999999999999999999999999994 444322 455778899999999999999999999997



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query242
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-51
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-07
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 3e-09
1okc_A 297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 6e-06
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 105/216 (48%), Positives = 137/216 (63%), Gaps = 7/216 (3%) Query: 28 EICTIPLDTAKVRLQLQKKAVA-GDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLH 86 ++ T PLDTAKVRLQ+Q ++ A +Y+G+LGT+ T+ R EG SL+ G+V GL Sbjct: 16 DLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQ 75 Query: 87 RQCLFGGLRIGLYEPVKTLYV-GKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRL 145 RQ F +RIGLY+ VK Y G + G + ++LAG TTGAL + +A PTD+VKVR Sbjct: 76 RQMSFASVRIGLYDSVKQFYTKGSEHAG---IGSRLLAGSTTGALAVAVAQPTDVVKVRF 132 Query: 146 QAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQ 205 QA+ + G RRY + AY TI ++EG LW G PNVARNAI+N AEL +YD +K Sbjct: 133 QAQARAGGG--RRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKD 190 Query: 206 TILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVV 241 T+LK TD++ H S GAGF I SPVDVV Sbjct: 191 TLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVV 226
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query242
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-98
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-39
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-36
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-35
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-18
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  288 bits (738), Expect = 2e-98
 Identities = 107/230 (46%), Positives = 140/230 (60%), Gaps = 5/230 (2%)

Query: 13  LAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGD-GVALPKYKGMLGTVATIARE 71
           +   F  +  AAC A++ T PLDTAKVRLQ+Q ++       A  +Y+G+LGT+ T+ R 
Sbjct: 1   MTVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRT 60

Query: 72  EGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALG 131
           EG  SL+ G+V GL RQ  F  +RIGLY+ VK  Y          +  ++LAG TTGAL 
Sbjct: 61  EGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS--EHAGIGSRLLAGSTTGALA 118

Query: 132 IMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAI 191
           + +A PTD+VKVR QA+ +      RRY   + AY TI ++EG   LW G  PNVARNAI
Sbjct: 119 VAVAQPTDVVKVRFQAQARAGG--GRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAI 176

Query: 192 INAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVV 241
           +N AEL +YD +K T+LK    TD++  H  S  GAGF    I SPVDVV
Sbjct: 177 VNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVV 226


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query242
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=2.8e-45  Score=300.17  Aligned_cols=229  Identities=23%  Similarity=0.369  Sum_probs=195.3

Q ss_pred             CccchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhccccccCCCccCCCCCcHHHHHHHHHHhhCccccccChhHHHHHH
Q 026197            9 SDISLAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQ   88 (242)
Q Consensus         9 ~~~~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~   88 (242)
                      ++.++..++++|+++|+++.++++|+|++|+|+|++.....  ......|+++++++++++++||+++||||+.+++++.
T Consensus         3 ~~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~--~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~   80 (297)
T 1okc_A            3 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ--ISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRY   80 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS--CCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccc--cccccccccHHHHHHHHHhccchhheecccHHHHHHH
Confidence            34667889999999999999999999999999999864311  0123468999999999999999999999999999999


Q ss_pred             hhhchhheeecHHHHhhh-ccCCCCCC--CchHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCCCCCCCCCCchHHH
Q 026197           89 CLFGGLRIGLYEPVKTLY-VGKDFVGD--VPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNA  165 (242)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~~~~~~~~~y~~~~~~  165 (242)
                      ++..+++|.+||.+++.+ ...+....  .+....+++|++||++++++++|+|+||+|+|.+... .+....|++.+++
T Consensus        81 ~~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~-~~~~~~~~~~~~~  159 (297)
T 1okc_A           81 FPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGK-GAAQREFTGLGNC  159 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS-STTTCSCSSHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccC-CCcCcCCCCHHHH
Confidence            999999999999999954 32221112  2346788999999999999999999999999998542 1223579999999


Q ss_pred             HHHHHHhhChhhhcccchhhHHHHHHHhhhHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhhcCcccccC
Q 026197          166 YSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVC  242 (242)
Q Consensus       166 ~~~i~~~~Gi~gly~G~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pldvir  242 (242)
                      +++++++||++|||||+.+++++.+|+.+++|.+||.+++.+.+..  +.+....+++|.+||++++++++|+|||+
T Consensus       160 ~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~--~~~~~~~~~~g~~ag~~a~~~t~P~dvvk  234 (297)
T 1okc_A          160 ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK--NVHIIVSWMIAQTVTAVAGLVSYPFDTVR  234 (297)
T ss_dssp             HHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG--CSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC--CccHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence            9999999999999999999999999999999999999999765432  34677789999999999999999999985



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 242
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 7e-19
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 7e-19
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 81.3 bits (199), Expect = 7e-19
 Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 9/191 (4%)

Query: 13  LAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREE 72
            AG  AS   A   +     PLD A+ RL        G G A  ++ G+   +  I + +
Sbjct: 111 FAGNLASGGAAGATSLCFVYPLDFARTRLAAD----VGKGAAQREFTGLGNCITKIFKSD 166

Query: 73  GMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGI 132
           G+  L++G    +    ++     G+Y+  K +      V  +      +   T  A+  
Sbjct: 167 GLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIV---SWMIAQTVTAVAG 223

Query: 133 MIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAII 192
           +++ P D V+ R+  +     G    Y+G ++ +  I K EG  A + G   NV R  + 
Sbjct: 224 LVSYPFDTVRRRMMMQSG-RKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR-GMG 281

Query: 193 NAAELASYDQV 203
            A  L  YD++
Sbjct: 282 GAFVLVLYDEI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query242
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.4e-41  Score=275.53  Aligned_cols=230  Identities=23%  Similarity=0.362  Sum_probs=201.0

Q ss_pred             CCccchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhccccccCCCccCCCCCcHHHHHHHHHHhhCccccccChhHHHHH
Q 026197            8 KSDISLAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHR   87 (242)
Q Consensus         8 ~~~~~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~   87 (242)
                      +++.++.+.|++|++|++++.+++||||++|+|+|++.....  ......+++.++.+++++++||+++||+|+.+.+++
T Consensus         1 ~~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~--~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~   78 (292)
T d1okca_           1 DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ--ISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIR   78 (292)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS--CCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCC--CCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhh
Confidence            356889999999999999999999999999999999865431  224567899999999999999999999999999999


Q ss_pred             HhhhchhheeecHHHHhhhccCCCCCC---CchHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCCCCCCCCCCchHH
Q 026197           88 QCLFGGLRIGLYEPVKTLYVGKDFVGD---VPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALN  164 (242)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~~~~~~~~~y~~~~~  164 (242)
                      ..+...++|+.++.+++.+........   ......+.+|.+|++++.++++|+|++|+|+|.+.... ...+.|.+.++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~-~~~~~~~~~~~  157 (292)
T d1okca_          79 YFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG-AAQREFTGLGN  157 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS-TTTCSCSSHHH
T ss_pred             hhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccc-ccccccccHHH
Confidence            999999999999999998865432222   23456788999999999999999999999999987532 23457899999


Q ss_pred             HHHHHHHhhChhhhcccchhhHHHHHHHhhhHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhhcCcccccC
Q 026197          165 AYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVC  242 (242)
Q Consensus       165 ~~~~i~~~~Gi~gly~G~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pldvir  242 (242)
                      ++++++++||+++||+|+.+++++.+++.+++|..||.+++.+.+..  .......++++.+++.++++++||+||||
T Consensus       158 ~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~a~~~t~P~dvvk  233 (292)
T d1okca_         158 CITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK--NVHIIVSWMIAQTVTAVAGLVSYPFDTVR  233 (292)
T ss_dssp             HHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG--CSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccccc--ccchHHHHHHHHHHHHHHhhccccHHHHH
Confidence            99999999999999999999999999999999999999999776543  45678889999999999999999999986



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure