Citrus Sinensis ID: 026322

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQEFF
cccccEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccHHHHcccEEEEEEccccEEEEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccHHHHHHHcccccHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHHcccccccccccccccccccEEEEcccccEEEEEEcccccccccEEEEEEEEccccc
ccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccEEEEEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccHcccEEEEEEccccccEEEEEEEccccccccEEEEEEEEEccc
MFSTPKAFVKIYfncphassspesevLTDIFTRLLLDYLNEYAYYAQVAGLdyginhtesGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKeyhnnkflqpFQLAMYYCSLilqdqtwpwmeelevlphleaedlaKFVPMMLSRTFLECYIagniesneagSIIQYIEDVffkgsnpicqplfpsqhltnRVVKLekgknyvysnqglnpsdenscLVHYIQVQEFF
MFSTPKAFVKIYFNcphassspeseVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNqglnpsdensCLVHYIQVQEFF
MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQEFF
******AFVKIYFNCPH*******EVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLN***ENSCLVHYIQV****
MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQEFF
MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQEFF
MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQEFF
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQEFF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query240 2.2.26 [Sep-21-2011]
O22941 970 Zinc-metallopeptidase, pe yes no 0.991 0.245 0.731 1e-103
Q24K02 1019 Insulin-degrading enzyme yes no 0.908 0.213 0.361 5e-30
P14735 1019 Insulin-degrading enzyme no no 0.908 0.213 0.361 6e-30
P35559 1019 Insulin-degrading enzyme yes no 0.908 0.213 0.356 1e-29
Q9JHR7 1019 Insulin-degrading enzyme yes no 0.908 0.213 0.352 1e-28
O14077 969 Putative zinc protease mu yes no 0.966 0.239 0.281 2e-27
Q06010 1027 A-factor-processing enzym yes no 0.958 0.223 0.289 4e-23
P22817 990 Insulin-degrading enzyme yes no 0.962 0.233 0.286 6e-23
O43847 1150 Nardilysin OS=Homo sapien no no 0.937 0.195 0.326 8e-21
Q5R4H6 1152 Nardilysin OS=Pongo abeli no no 0.937 0.195 0.326 9e-21
>sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1 Back     alignment and function desciption
 Score =  375 bits (962), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 174/238 (73%), Positives = 203/238 (85%)

Query: 1   MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTES 60
           MFS PKA+VK+ FNCP A SSP++ VLTDIFTRLL+DYLNEYAYYAQVAGL YG++ +++
Sbjct: 526 MFSKPKAYVKMDFNCPLAVSSPDAAVLTDIFTRLLMDYLNEYAYYAQVAGLYYGVSLSDN 585

Query: 61  GFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYY 120
           GFE+T++GYNHKLRILLET+  KIA F+VKPDRF+VIKE VTKEY N KF QP+  AMYY
Sbjct: 586 GFELTLLGYNHKLRILLETVVGKIANFEVKPDRFAVIKETVTKEYQNYKFRQPYHQAMYY 645

Query: 121 CSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYI 180
           CSLILQDQTWPW EEL+VL HLEAED+AKFVPM+LSRTF+ECYIAGN+E+NEA S++++I
Sbjct: 646 CSLILQDQTWPWTEELDVLSHLEAEDVAKFVPMLLSRTFIECYIAGNVENNEAESMVKHI 705

Query: 181 EDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQE 238
           EDV F    PIC+PLFPSQHLTNRVVKL +G  Y Y   G NPSDENS LVHYIQV  
Sbjct: 706 EDVLFNDPKPICRPLFPSQHLTNRVVKLGEGMKYFYHQDGSNPSDENSALVHYIQVHR 763
Peptidase that might be involved in pathogen or wound response. Not required for peroxisome biogenesis, indole-3-butyric acid (IBA) metabolism, fatty acid beta-oxidation or degradation of glyoxylate cycle enzymes during seedling development.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: -
>sp|Q24K02|IDE_BOVIN Insulin-degrading enzyme OS=Bos taurus GN=IDE PE=2 SV=1 Back     alignment and function description
>sp|P14735|IDE_HUMAN Insulin-degrading enzyme OS=Homo sapiens GN=IDE PE=1 SV=4 Back     alignment and function description
>sp|P35559|IDE_RAT Insulin-degrading enzyme OS=Rattus norvegicus GN=Ide PE=1 SV=1 Back     alignment and function description
>sp|Q9JHR7|IDE_MOUSE Insulin-degrading enzyme OS=Mus musculus GN=Ide PE=1 SV=1 Back     alignment and function description
>sp|O14077|MU138_SCHPO Putative zinc protease mug138 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug138 PE=1 SV=1 Back     alignment and function description
>sp|Q06010|STE23_YEAST A-factor-processing enzyme OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE23 PE=1 SV=2 Back     alignment and function description
>sp|P22817|IDE_DROME Insulin-degrading enzyme OS=Drosophila melanogaster GN=Ide PE=1 SV=4 Back     alignment and function description
>sp|O43847|NRDC_HUMAN Nardilysin OS=Homo sapiens GN=NRD1 PE=1 SV=2 Back     alignment and function description
>sp|Q5R4H6|NRDC_PONAB Nardilysin OS=Pongo abelii GN=NRD1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query240
224087014 949 predicted protein [Populus trichocarpa] 0.991 0.250 0.777 1e-108
255582581 967 Insulin-degrading enzyme, putative [Rici 0.991 0.246 0.781 1e-108
225441825 965 PREDICTED: zinc-metallopeptidase, peroxi 0.991 0.246 0.773 1e-107
255582579 909 Insulin-degrading enzyme, putative [Rici 0.991 0.261 0.735 1e-103
15227435 970 insulysin [Arabidopsis thaliana] gi|7509 0.991 0.245 0.731 1e-101
110741612 970 putative zinc protease [Arabidopsis thal 0.991 0.245 0.726 1e-101
297827829 970 peptidase M16 family protein [Arabidopsi 0.991 0.245 0.726 1e-100
225441823 965 PREDICTED: zinc-metallopeptidase, peroxi 0.991 0.246 0.726 1e-99
356572034 964 PREDICTED: zinc-metallopeptidase, peroxi 0.983 0.244 0.737 1e-98
356504785 964 PREDICTED: zinc-metallopeptidase, peroxi 0.983 0.244 0.733 2e-98
>gi|224087014|ref|XP_002308028.1| predicted protein [Populus trichocarpa] gi|222854004|gb|EEE91551.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 185/238 (77%), Positives = 214/238 (89%)

Query: 1   MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTES 60
           MFSTPKA+VKI FNCP ASSSPE+EVLTDIF RLL+D LN+YAYYAQVAGL YGI++T+S
Sbjct: 503 MFSTPKAYVKIDFNCPFASSSPETEVLTDIFARLLMDDLNDYAYYAQVAGLYYGISNTDS 562

Query: 61  GFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYY 120
           GF+VTVVGYNHKLRILLET+ +KI+ FKVKPDRFSVIKEMVTKEY N KF QP+Q AMYY
Sbjct: 563 GFQVTVVGYNHKLRILLETVIEKISNFKVKPDRFSVIKEMVTKEYGNLKFQQPYQQAMYY 622

Query: 121 CSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYI 180
           CSL+LQDQTWPWME+LE+LPHL+AEDLAKF+P+MLSR FLECYIAGNIE +EA S+I +I
Sbjct: 623 CSLLLQDQTWPWMEQLEILPHLQAEDLAKFIPLMLSRAFLECYIAGNIERSEAESMILHI 682

Query: 181 EDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQE 238
           EDVF +G +PICQPLFPSQHLT+RV+KLE+G NY+Y  +GLNP DENS LVHYIQ+  
Sbjct: 683 EDVFNEGPDPICQPLFPSQHLTSRVIKLERGINYLYPIEGLNPDDENSALVHYIQIHR 740

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255582581|ref|XP_002532073.1| Insulin-degrading enzyme, putative [Ricinus communis] gi|223528255|gb|EEF30307.1| Insulin-degrading enzyme, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225441825|ref|XP_002283993.1| PREDICTED: zinc-metallopeptidase, peroxisomal [Vitis vinifera] gi|297739661|emb|CBI29843.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255582579|ref|XP_002532072.1| Insulin-degrading enzyme, putative [Ricinus communis] gi|223528254|gb|EEF30306.1| Insulin-degrading enzyme, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15227435|ref|NP_181710.1| insulysin [Arabidopsis thaliana] gi|75097648|sp|O22941.1|PXM16_ARATH RecName: Full=Zinc-metallopeptidase, peroxisomal; AltName: Full=Peroxisomal M16 protease gi|2335108|gb|AAC02769.1| putative zinc protease [Arabidopsis thaliana] gi|330254939|gb|AEC10033.1| insulysin [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|110741612|dbj|BAE98754.1| putative zinc protease [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297827829|ref|XP_002881797.1| peptidase M16 family protein [Arabidopsis lyrata subsp. lyrata] gi|297327636|gb|EFH58056.1| peptidase M16 family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225441823|ref|XP_002283970.1| PREDICTED: zinc-metallopeptidase, peroxisomal [Vitis vinifera] gi|297739662|emb|CBI29844.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356572034|ref|XP_003554175.1| PREDICTED: zinc-metallopeptidase, peroxisomal-like [Glycine max] Back     alignment and taxonomy information
>gi|356504785|ref|XP_003521175.1| PREDICTED: zinc-metallopeptidase, peroxisomal-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query240
TAIR|locus:2054346 970 AT2G41790 [Arabidopsis thalian 0.983 0.243 0.737 1.4e-94
TAIR|locus:2103523 891 AT3G57470 [Arabidopsis thalian 0.987 0.265 0.666 3e-85
ZFIN|ZDB-GENE-070410-85 998 ide "insulin-degrading enzyme" 0.954 0.229 0.348 8.7e-30
UNIPROTKB|F1SC98 990 IDE "Uncharacterized protein" 0.908 0.220 0.361 4.8e-29
UNIPROTKB|Q24K02 1019 IDE "Insulin-degrading enzyme" 0.908 0.213 0.361 5.1e-29
UNIPROTKB|E2RGZ3 1019 IDE "Uncharacterized protein" 0.908 0.213 0.361 5.1e-29
UNIPROTKB|P14735 1019 IDE "Insulin-degrading enzyme" 0.908 0.213 0.361 5.1e-29
RGD|2861 1019 Ide "insulin degrading enzyme" 0.908 0.213 0.356 1.1e-28
ASPGD|ASPL0000015933 1100 AN8044 [Emericella nidulans (t 0.945 0.206 0.309 2.5e-28
MGI|MGI:96412 1019 Ide "insulin degrading enzyme" 0.908 0.213 0.352 7.6e-28
TAIR|locus:2054346 AT2G41790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
 Identities = 174/236 (73%), Positives = 203/236 (86%)

Query:     1 MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTES 60
             MFS PKA+VK+ FNCP A SSP++ VLTDIFTRLL+DYLNEYAYYAQVAGL YG++ +++
Sbjct:   526 MFSKPKAYVKMDFNCPLAVSSPDAAVLTDIFTRLLMDYLNEYAYYAQVAGLYYGVSLSDN 585

Query:    61 GFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYY 120
             GFE+T++GYNHKLRILLET+  KIA F+VKPDRF+VIKE VTKEY N KF QP+  AMYY
Sbjct:   586 GFELTLLGYNHKLRILLETVVGKIANFEVKPDRFAVIKETVTKEYQNYKFRQPYHQAMYY 645

Query:   121 CSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYI 180
             CSLILQDQTWPW EEL+VL HLEAED+AKFVPM+LSRTF+ECYIAGN+E+NEA S++++I
Sbjct:   646 CSLILQDQTWPWTEELDVLSHLEAEDVAKFVPMLLSRTFIECYIAGNVENNEAESMVKHI 705

Query:   181 EDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQV 236
             EDV F    PIC+PLFPSQHLTNRVVKL +G  Y Y   G NPSDENS LVHYIQV
Sbjct:   706 EDVLFNDPKPICRPLFPSQHLTNRVVKLGEGMKYFYHQDGSNPSDENSALVHYIQV 761
GO:0003824 "catalytic activity" evidence=IEA
GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
TAIR|locus:2103523 AT3G57470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070410-85 ide "insulin-degrading enzyme" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1SC98 IDE "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q24K02 IDE "Insulin-degrading enzyme" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RGZ3 IDE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P14735 IDE "Insulin-degrading enzyme" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|2861 Ide "insulin degrading enzyme" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ASPGD|ASPL0000015933 AN8044 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
MGI|MGI:96412 Ide "insulin degrading enzyme" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O22941PXM16_ARATH3, ., 4, ., 2, 4, ., -0.73100.99160.2453yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_VI0419
hypothetical protein (950 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query240
COG1025 937 COG1025, Ptr, Secreted/periplasmic Zn-dependent pe 9e-36
PRK15101 961 PRK15101, PRK15101, protease3; Provisional 2e-04
>gnl|CDD|223956 COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
 Score =  133 bits (337), Expect = 9e-36
 Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 9/236 (3%)

Query: 3   STPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGF 62
             PKA V +    PHAS SP ++VLT+++  L  D L++ +Y A +AGL + +    +G 
Sbjct: 523 VEPKASVSLAIRSPHASRSPRNQVLTELYAYLANDALDKLSYQASLAGLSFSLAANSNGL 582

Query: 63  EVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCS 122
           ++T+ G+  +L  LL      +    V  DRF   K  +++E  N    +P++ A+   +
Sbjct: 583 DLTISGFTQRLPQLLRAFLDGLFSLPVDEDRFEQAKSQLSEELKNALTGKPYRQALDGLT 642

Query: 123 LILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIED 182
            +LQ   W   E    L  +  E+ A F   +L+   LE  + GN+   +A       E 
Sbjct: 643 GLLQVPYWSREERRNALESVSVEEFAAFRDTLLNGVHLEMLVLGNLTEADA---TNLAET 699

Query: 183 VFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQE 238
           +  K       P   S    N  V L KG   ++   G      N+ +++  Q  E
Sbjct: 700 LQKK------LPAIGSTWYRNPSVYLLKGGTRIFETVGGESDSANAAILYPQQYDE 749

Length = 937
>gnl|CDD|185056 PRK15101, PRK15101, protease3; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 240
KOG0959 974 consensus N-arginine dibasic convertase NRD1 and r 100.0
COG1025 937 Ptr Secreted/periplasmic Zn-dependent peptidases, 100.0
PRK15101 961 protease3; Provisional 99.97
TIGR02110 696 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe 99.44
COG0612 438 PqqL Predicted Zn-dependent peptidases [General fu 99.42
PRK15101 961 protease3; Provisional 99.1
PF00675149 Peptidase_M16: Insulinase (Peptidase family M16) T 98.79
KOG0960 467 consensus Mitochondrial processing peptidase, beta 98.68
PTZ00432 1119 falcilysin; Provisional 98.39
KOG2067 472 consensus Mitochondrial processing peptidase, alph 97.92
PF05193184 Peptidase_M16_C: Peptidase M16 inactive domain; In 97.7
KOG2583 429 consensus Ubiquinol cytochrome c reductase, subuni 97.51
KOG2067472 consensus Mitochondrial processing peptidase, alph 97.34
COG0612438 PqqL Predicted Zn-dependent peptidases [General fu 96.9
COG1025 937 Ptr Secreted/periplasmic Zn-dependent peptidases, 96.83
COG1026 978 Predicted Zn-dependent peptidases, insulinase-like 96.73
KOG0959 974 consensus N-arginine dibasic convertase NRD1 and r 96.24
KOG0961 1022 consensus Predicted Zn2+-dependent endopeptidase, 95.88
PF05193184 Peptidase_M16_C: Peptidase M16 inactive domain; In 95.39
PTZ00432 1119 falcilysin; Provisional 95.3
KOG0960467 consensus Mitochondrial processing peptidase, beta 95.15
COG1026 978 Predicted Zn-dependent peptidases, insulinase-like 92.62
PF08367248 M16C_assoc: Peptidase M16C associated; InterPro: I 91.22
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2.5e-41  Score=312.02  Aligned_cols=236  Identities=40%  Similarity=0.711  Sum_probs=225.0

Q ss_pred             CCCCceeEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhcccccccEEEEeeeCceeEEEEeeccchHHHHHHHH
Q 026322            1 MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETI   80 (240)
Q Consensus         1 ~F~~Pk~~i~~~i~~~~~~~s~~~~~l~~L~~~ll~~~l~e~~y~a~~agl~~~~~~~~~gi~l~v~G~s~kl~~ll~~i   80 (240)
                      +|++||+.+.+.+.+|.+..+|.+++++.+|+.++.+.++|..|+|..||++++++.+.+|+.++|+||+||++.+++.+
T Consensus       528 ~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~~l~d~l~E~~Y~A~~aGl~~~~~~s~~G~~~~v~Gfnekl~~ll~~~  607 (974)
T KOG0959|consen  528 KFNVPKAYTKFDFICPGATQSPLNSVLSTLYVRLLKDQLNEYLYPALLAGLTYSLSSSSKGVELRVSGFNEKLPLLLEKV  607 (974)
T ss_pred             ccccchhheeeeecCcccccCHHHHHHHHHHHHHHHHHHhHHHHHHHhccceEEeeecCCceEEEEeccCcccHHHHHHH
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCChhhHHHHHHHHHHHHhhhcccChHHHHHHHHHHhccCCCCChhHHHhhCCCCCHHHHHHHHHHHhhccee
Q 026322           81 FQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFL  160 (240)
Q Consensus        81 ~~~l~~~~~~~~~F~~~k~~l~~~~~n~~~~~p~~~a~~~~~~ll~~~~~~~~e~l~~l~~it~edl~~f~~~~l~~~~~  160 (240)
                      ++.+.++.+++++|+.+|+.+.++++|...++||.+|.+++..++.+..|+.++++++++++|++|+..|+..++++.++
T Consensus       608 ~~~~~~f~~~~~rf~iike~~~~~~~n~~~~~p~~~a~~~~~lll~~~~W~~~e~~~al~~~~le~~~~F~~~~~~~~~~  687 (974)
T KOG0959|consen  608 VQMMANFELDEDRFEIIKELLKRELRNHAFDNPYQLANDYLLLLLEESIWSKEELLEALDDVTLEDLESFISEFLQPFHL  687 (974)
T ss_pred             HHHHHhccccHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHhhccccchHHHHHHhhcccHHHHHHHHHHHhhhhhe
Confidence            99999999999999999999999999988888999999999999999999999999999999999999999999999999


Q ss_pred             eEEeecCCChHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcCccceeEeCCCCeEEEEeCCCCCCCCCeEEEEEEEeCc
Q 026322          161 ECYIAGNIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQE  238 (240)
Q Consensus       161 ~~lv~GNi~~~~A~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~Ns~v~~y~Q~g~  238 (240)
                      +++|+||++.++|+++++.+.+.+ ....|.+.|+.+.+....|++.+|.|.++.|+.. .|++|+|||+++|||+|.
T Consensus       688 e~~i~GN~te~~A~~l~~~v~d~l-~~~~~~~~p~~~~~~~~~~~~~lp~G~~~~~~~~-~n~~~~ns~i~~~~Q~~~  763 (974)
T KOG0959|consen  688 ELLIHGNLTEKEALQLLKSVLDIL-KSAAPNSRPLFRSEHLPRREIQLPNGDYYFYRHL-LNKTDDNSCIEVYYQIGV  763 (974)
T ss_pred             EEEEecCcchHHHHHHHHHHHhhh-hccCCCCccccccccCcccceeccCCceEEEEcc-cccCCCCceEEEEEEccc
Confidence            999999999999999999999999 3344447788888889999999999999987766 789999999999999975

>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK15101 protease3; Provisional Back     alignment and domain information
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>PRK15101 protease3; Provisional Back     alignment and domain information
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification Back     alignment and domain information
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion] Back     alignment and domain information
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query240
2wby_A 990 Crystal Structure Of Human Insulin-Degrading Enzyme 5e-32
3qz2_A 990 The Structure Of Cysteine-Free Human Insulin Degrad 5e-32
3hgz_A 969 Crystal Structure Of Human Insulin-Degrading Enzyme 5e-32
3e4a_A 1019 Human Ide-Inhibitor Complex At 2.6 Angstrom Resolut 6e-32
3e4z_A 990 Crystal Structure Of Human Insulin Degrading Enzyme 6e-32
3cww_A 990 Crystal Structure Of Ide-Bradykinin Complex Length 8e-32
2g47_A 990 Crystal Structure Of Human Insulin-Degrading Enzyme 4e-31
2jg4_A 990 Substrate-Free Ide Structure In Its Closed Conforma 4e-31
3p7l_A 978 Rat Insulin Degrading Enzyme (Insulysin) Length = 9 9e-31
3p7o_A 1019 Rat Insulin Degrading Enzyme (Insulysin) E111f Muta 1e-30
3tuv_A 1019 Crystal Structure Of Insulysin With Bound Atp Lengt 1e-30
1q2l_A 939 Crystal Structure Of Pitrilysin Length = 939 2e-05
>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Insulin Length = 990 Back     alignment and structure 
Iteration: 1

 Score =  134 bits (336), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 123/227 (54%), Gaps = 9/227 (3%)
Query: 2   FSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESG 61
           F  PKA +   F  P A   P    +  ++  LL D LNEYAY A++AGL Y + +T  G
Sbjct: 538 FFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYG 597
Query: 62  FEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYC 121
             ++V GYN K  ILL+ I +K+A F++   RF +IKE   +  +N +  QP Q AMYY 
Sbjct: 598 MYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYL 657
Query: 122 SLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIE 181
            L++ +  W   E  E L  +    L  F+P +LSR  +E  + GNI    A  I+Q +E
Sbjct: 658 RLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVE 717
Query: 182 DVFFKGSNPICQPLFPSQHLTNRVVKL-EKG------KNYVYSNQGL 221
           D   + ++   +PL PSQ +  R V+L ++G      +N V++N G+
Sbjct: 718 DTLIEHAH--TKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNSGI 762
>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading Enzyme Length = 990 Back     alignment and structure
>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amylin Length = 969 Back     alignment and structure
>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution Length = 1019 Back     alignment and structure
>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In Complex With Insulin-Like Growth Factor Ii Length = 990 Back     alignment and structure
>pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex Length = 990 Back     alignment and structure
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amyloid-Beta (1-40) Length = 990 Back     alignment and structure
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation Length = 990 Back     alignment and structure
>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) Length = 978 Back     alignment and structure
>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With Two Bound Peptides Length = 1019 Back     alignment and structure
>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp Length = 1019 Back     alignment and structure
>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin Length = 939 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query240
3cww_A 990 Insulysin, insulin-degrading enzyme, insulinase; A 2e-54
1q2l_A 939 Protease III; hydrolase; 2.20A {Escherichia coli s 2e-45
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990 Back     alignment and structure
 Score =  186 bits (473), Expect = 2e-54
 Identities = 84/235 (35%), Positives = 119/235 (50%), Gaps = 4/235 (1%)

Query: 2   FSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESG 61
           F  PKA +   F  P A   P    +  ++  LL D LNEYAY A++AGL Y + +T  G
Sbjct: 538 FFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYG 597

Query: 62  FEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYC 121
             ++V GYN K  ILL+ I +K+A F++   RF +IKE   +  +N +  QP Q AMYY 
Sbjct: 598 MYLSVKGYNDKQPILLKKIIEKMATFEIDEARFEIIKEAYMRSLNNFRAEQPHQHAMYYL 657

Query: 122 SLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIE 181
            L++ +  W   E  E L  +    L  F+P +LSR  +E  + GNI    A  I+Q +E
Sbjct: 658 RLLMTEVAWTKDELKEALADVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVE 717

Query: 182 DVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQV 236
           D      +   +PL PSQ    R V+L     +VY  +  N    NS +  Y Q 
Sbjct: 718 DTLI--EHAHTKPLLPSQLAAYREVQLPDRGWFVYQQR--NEVHNNSGIEIYYQT 768
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query240
3cww_A 990 Insulysin, insulin-degrading enzyme, insulinase; A 99.95
1q2l_A 939 Protease III; hydrolase; 2.20A {Escherichia coli s 99.95
3gwb_A 434 Peptidase M16 inactive domain family protein; pept 99.74
3cx5_A 431 Cytochrome B-C1 complex subunit 1, mitochondrial; 99.72
3amj_B 424 Zinc peptidase inactive subunit; alpha/beta, zinc 99.7
1pp9_B 439 Ubiquinol-cytochrome C reductase complex core Pro 99.67
3d3y_A 425 Uncharacterized protein; APC29635, conserved prote 99.67
1hr6_A 475 Alpha-MPP, mitochondrial processing peptidase alph 99.65
3eoq_A 406 Putative zinc protease; two similar domains of bet 99.55
3hdi_A 421 Processing protease; CAGE structure, M16B peptidas 99.53
3cx5_B 352 Cytochrome B-C1 complex subunit 2, mitochondrial; 99.51
3ami_A 445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 99.48
1pp9_A 446 Ubiquinol-cytochrome C reductase complex core Pro 99.44
1hr6_B 443 Beta-MPP, mitochondrial processing peptidase beta 99.4
2fge_A 995 Atprep2;, zinc metalloprotease (insulinase family) 99.39
3go9_A 492 Insulinase family protease; IDP00573, structural g 99.34
1q2l_A 939 Protease III; hydrolase; 2.20A {Escherichia coli s 99.11
3cww_A 990 Insulysin, insulin-degrading enzyme, insulinase; A 98.95
3ih6_A197 Putative zinc protease; bordetella pertussis toham 98.78
3s5m_A 1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 98.6
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 98.43
2fge_A 995 Atprep2;, zinc metalloprotease (insulinase family) 98.41
3hdi_A421 Processing protease; CAGE structure, M16B peptidas 98.36
3gwb_A434 Peptidase M16 inactive domain family protein; pept 98.33
1hr6_A475 Alpha-MPP, mitochondrial processing peptidase alph 98.32
3eoq_A406 Putative zinc protease; two similar domains of bet 98.32
1pp9_B439 Ubiquinol-cytochrome C reductase complex core Pro 98.31
3cx5_A431 Cytochrome B-C1 complex subunit 1, mitochondrial; 98.29
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 98.29
1hr6_B443 Beta-MPP, mitochondrial processing peptidase beta 98.23
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 98.23
1pp9_A446 Ubiquinol-cytochrome C reductase complex core Pro 98.19
3go9_A492 Insulinase family protease; IDP00573, structural g 97.83
3s5m_A 1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 97.76
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Back     alignment and structure
Probab=99.95  E-value=2.1e-26  Score=220.77  Aligned_cols=234  Identities=36%  Similarity=0.558  Sum_probs=201.8

Q ss_pred             CCCCceeEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhcccccccEEEEeeeCceeEEEEeeccchHHHHHHHH
Q 026322            1 MFSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETI   80 (240)
Q Consensus         1 ~F~~Pk~~i~~~i~~~~~~~s~~~~~l~~L~~~ll~~~l~e~~y~a~~agl~~~~~~~~~gi~l~v~G~s~kl~~ll~~i   80 (240)
                      +|++|++.+++.+.+|....++++.+++.|++.++.+.+++..|.+.++|++++++.+.+|+.++++|++++++.+++.+
T Consensus       537 ~f~~P~~~i~~~~~~~~~~~~~~~~~~~~L~~~ll~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~g~~~~l~~~l~ll  616 (990)
T 3cww_A          537 KFFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKI  616 (990)
T ss_dssp             SCCCSEEEEEEEEECGGGTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEETTEEEEEEEEESTTHHHHHHHH
T ss_pred             ccCCCcEEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHhCCeEEEEEEcCCeEEEEEEeccHhHHHHHHHH
Confidence            38899999999999998888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCChhhHHHHHHHHHHHHhhhcccChHHHHHHHHHHhccCCCCChhHHHhhCCCCCHHHHHHHHHHHhhccee
Q 026322           81 FQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFL  160 (240)
Q Consensus        81 ~~~l~~~~~~~~~F~~~k~~l~~~~~n~~~~~p~~~a~~~~~~ll~~~~~~~~e~l~~l~~it~edl~~f~~~~l~~~~~  160 (240)
                      .+.+.++.+++++|+++|++++++++|...+.|+.+|...+..+++++.|..++.++.|+++|.+++.+|++.+++..++
T Consensus       617 ~~~l~~p~~~~~~f~~~k~~~~~~~~~~~~~~p~~~a~~~~~~~l~~~~~~~~~~~~~l~~lt~~~l~~~~~~~~~~~~~  696 (990)
T 3cww_A          617 IEKMATFEIDEARFEIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALADVTLPRLKAFIPQLLSRLHI  696 (990)
T ss_dssp             HHHHHTCCCCHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHBSSCCCHHHHHHHHTTCCHHHHHHHHHHHHHEEEE
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHhhhhcChHHHHHHHHHHHhCCCCCCHHHHHHHHhcCCHHHHHHHHHHHHhhheE
Confidence            99999999999999999999999999998856999999999999999899988899999999999999999999999999


Q ss_pred             eEEeecCCChHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcCccceeEeCCCCeEEEEeCCCCCCCCCeEEEEEEEeCc
Q 026322          161 ECYIAGNIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENSCLVHYIQVQE  238 (240)
Q Consensus       161 ~~lv~GNi~~~~A~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~Ns~v~~y~Q~g~  238 (240)
                      +++|+||++.+++.++.+.+.+.+...+.  +.|.++.+.+..+.+.+|.|..+++..  .++++.|+++..|+|.|.
T Consensus       697 ~~~v~Gn~~~~~~~~~~~~~~~~l~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~  770 (990)
T 3cww_A          697 EALLHGNITKQAALGIMQMVEDTLIEHAH--TKPLLPSQLAAYREVQLPDRGWFVYQQ--RNEVHNNSGIEIYYQTDM  770 (990)
T ss_dssp             EEEEEESCCHHHHHHHHHHHHHHHHHHHC--CEECCGGGCCCCCBBCCCTTEEEEEEE--ECSSCSSEEEEEEEEEEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHHHHhccCC--CCCCchhhccccceEEcCCCCeEEEEe--cCCCCCCcEEEEEEeCCC
Confidence            99999999999999997776665532111  111211122233445667777655543  345688999999999873
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Back     alignment and structure
>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Back     alignment and structure
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Back     alignment and structure
>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 240
d1q2la1229 d.185.1.1 (A:504-732) Protease III {Escherichia co 6e-24
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

 Score = 93.5 bits (231), Expect = 6e-24
 Identities = 34/191 (17%), Positives = 78/191 (40%), Gaps = 1/191 (0%)

Query: 2   FSTPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESG 61
            S PKA V +    P A  S  ++V+  +   L    L++ +  A V G+ +   +  +G
Sbjct: 40  ASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFST-NANNG 98

Query: 62  FEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYC 121
             V   GY  +L  L + + +    +    D+    K    +   + +  + F+ A+   
Sbjct: 99  LMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPA 158

Query: 122 SLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIE 181
            ++ Q   +   E  ++LP +  +++  +   + S    E  + GN+   +A ++ + ++
Sbjct: 159 QMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQ 218

Query: 182 DVFFKGSNPIC 192
                  +  C
Sbjct: 219 KQLGADGSEWC 229

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query240
d1q2la1229 Protease III {Escherichia coli [TaxId: 562]} 99.97
d1hr6b1222 Mitochondrial processing peptidase (MPP) beta chai 99.67
d1ppja1232 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 99.62
d3cx5a1213 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.62
d1hr6a1220 Mitochondrial processing peptidase (MPP) alpha cha 99.59
d1ppjb1219 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.54
d1q2la4240 Protease III {Escherichia coli [TaxId: 562]} 99.53
d3cx5b1202 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 99.51
d1ppjb2204 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 98.96
d1hr6b2217 Mitochondrial processing peptidase (MPP) beta chai 98.71
d1ppja2209 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 98.68
d1q2la2228 Protease III {Escherichia coli [TaxId: 562]} 98.67
d2fgea4257 Presequence protease 1, PREP1 {Thale cress (Arabid 98.64
d1hr6a2237 Mitochondrial processing peptidase (MPP) alpha cha 98.55
d3cx5a2218 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 98.44
d2fgea2196 Presequence protease 1, PREP1 {Thale cress (Arabid 97.9
d2fgea1258 Presequence protease 1, PREP1 {Thale cress (Arabid 97.4
d2fgea3268 Presequence protease 1, PREP1 {Thale cress (Arabid 95.44
d1q2la3240 Protease III {Escherichia coli [TaxId: 562]} 84.48
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=6.4e-29  Score=198.20  Aligned_cols=186  Identities=18%  Similarity=0.300  Sum_probs=178.0

Q ss_pred             CC-CceeEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhcccccccEEEEeeeCceeEEEEeeccchHHHHHHHH
Q 026322            2 FS-TPKAFVKIYFNCPHASSSPESEVLTDIFTRLLLDYLNEYAYYAQVAGLDYGINHTESGFEVTVVGYNHKLRILLETI   80 (240)
Q Consensus         2 F~-~Pk~~i~~~i~~~~~~~s~~~~~l~~L~~~ll~~~l~e~~y~a~~agl~~~~~~~~~gi~l~v~G~s~kl~~ll~~i   80 (240)
                      |. .||+.+.+.+.+|...+++++.+++.|+..++.+.+++..|.|..+|+++++.. ..|++++++||+++++.+++.+
T Consensus        39 f~~~P~~~i~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~e~~~~a~~~g~~~~~~~-~~~~~i~~~~~s~~l~~~l~~~  117 (229)
T d1q2la1          39 FASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNA-NNGLMVNANGYTQRLPQLFQAL  117 (229)
T ss_dssp             CTTSSEEEEEEEEECGGGGSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-SSEEEEEEEEESSSHHHHHHHH
T ss_pred             cCCCCEEEEEEEEEecccccChhHHHHHHHHHHHHHhhhhhHHHHHHhccccccccc-cceEEEEEEeehHHHHHHHHHH
Confidence            54 799999999999999999999999999999999999999999999999999975 5799999999999999999999


Q ss_pred             HHHhhcCCCChhhHHHHHHHHHHHHhhhcccChHHHHHHHHHHhccCCCCChhHHHhhCCCCCHHHHHHHHHHHhhccee
Q 026322           81 FQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFL  160 (240)
Q Consensus        81 ~~~l~~~~~~~~~F~~~k~~l~~~~~n~~~~~p~~~a~~~~~~ll~~~~~~~~e~l~~l~~it~edl~~f~~~~l~~~~~  160 (240)
                      ++.+.++.++++.|+++|+++++++++...+.|+.++...+..+...+.|+..+.++.|+.||++|+++|++++++..++
T Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~it~~dl~~f~~~~~~~~~~  197 (229)
T d1q2la1         118 LEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARP  197 (229)
T ss_dssp             HHHHHHCCCCSHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHTTSSSCCCHHHHHHHGGGCCHHHHHHHHHHHHTTCEE
T ss_pred             HHHhcCccCcHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHhcccCCCcchhhHHHHhhhhHHHHHHHHHHhcCccCE
Confidence            99999999999999999999999999999888999999999888888999999999999999999999999999999999


Q ss_pred             eEEeecCCChHHHHHHHHHHHHhhcCCC
Q 026322          161 ECYIAGNIESNEAGSIIQYIEDVFFKGS  188 (240)
Q Consensus       161 ~~lv~GNi~~~~A~~l~~~~~~~l~~~~  188 (240)
                      +++|+||++.++|+++++.+.+.|+.+.
T Consensus       198 ~~~i~Gn~~~~~a~~l~~~~~~~L~~~~  225 (229)
T d1q2la1         198 EFMVIGNMTEAQATTLARDVQKQLGADG  225 (229)
T ss_dssp             EEEEEESCCHHHHHHHHHHHHHHHTCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHhhcCCCC
Confidence            9999999999999999999999998654
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure