Citrus Sinensis ID: 026370
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 239 | ||||||
| 255552374 | 328 | Uridylate kinase, putative [Ricinus comm | 0.970 | 0.707 | 0.760 | 2e-96 | |
| 225431539 | 332 | PREDICTED: uridylate kinase-like [Vitis | 0.849 | 0.611 | 0.863 | 3e-96 | |
| 356512819 | 331 | PREDICTED: uridylate kinase-like [Glycin | 0.870 | 0.628 | 0.742 | 1e-87 | |
| 356525588 | 325 | PREDICTED: uridylate kinase-like [Glycin | 0.778 | 0.572 | 0.840 | 1e-86 | |
| 255637835 | 325 | unknown [Glycine max] | 0.778 | 0.572 | 0.835 | 7e-86 | |
| 449461831 | 341 | PREDICTED: uridylate kinase-like [Cucumi | 0.870 | 0.609 | 0.771 | 8e-86 | |
| 218189798 | 363 | hypothetical protein OsI_05332 [Oryza sa | 0.723 | 0.476 | 0.890 | 2e-84 | |
| 115442427 | 351 | Os01g0965400 [Oryza sativa Japonica Grou | 0.723 | 0.492 | 0.890 | 3e-84 | |
| 296088581 | 255 | unnamed protein product [Vitis vinifera] | 0.677 | 0.635 | 0.944 | 4e-84 | |
| 357131781 | 335 | PREDICTED: uridylate kinase-like [Brachy | 0.715 | 0.510 | 0.883 | 1e-82 |
| >gi|255552374|ref|XP_002517231.1| Uridylate kinase, putative [Ricinus communis] gi|223543602|gb|EEF45131.1| Uridylate kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/242 (76%), Positives = 207/242 (85%), Gaps = 10/242 (4%)
Query: 1 MAISTS--TVSSSNLLSFSS-TLGSSRIHRSSLMSFHNHQQTSNGRLVVNCCSSSDMGSA 57
MAISTS +++ N +S S +LG +IH M H+ T NGRL+++CCS DMG+
Sbjct: 1 MAISTSFAPINTLNPVSPSYYSLGPFKIHHPRFMRAHS---TPNGRLLIHCCS--DMGAT 55
Query: 58 QNPTNGRQPQMSSMSPFGVTLNDNGMSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMA 117
P + RQ QM+SM+ FG +N+ +S+PSYKWQRVLLKVSGEALAGD TQNIDPKITMA
Sbjct: 56 SEPMSIRQAQMTSMAAFG--MNETSLSRPSYKWQRVLLKVSGEALAGDRTQNIDPKITMA 113
Query: 118 IAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATM 177
IAREVASVTRLG+EVAIVVGGGNIFRG+S AG+SGLDRSSADYIGMLATVMNAIFLQATM
Sbjct: 114 IAREVASVTRLGVEVAIVVGGGNIFRGSSWAGSSGLDRSSADYIGMLATVMNAIFLQATM 173
Query: 178 ESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAE 237
ESIGIPTRVQTAFRMSEVAEPYIRRRA+RHLEKGRVVIFAAGTGNPFFTTDTAAALRCAE
Sbjct: 174 ESIGIPTRVQTAFRMSEVAEPYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAE 233
Query: 238 IS 239
I+
Sbjct: 234 IN 235
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431539|ref|XP_002281894.1| PREDICTED: uridylate kinase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356512819|ref|XP_003525113.1| PREDICTED: uridylate kinase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356525588|ref|XP_003531406.1| PREDICTED: uridylate kinase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255637835|gb|ACU19237.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449461831|ref|XP_004148645.1| PREDICTED: uridylate kinase-like [Cucumis sativus] gi|449507502|ref|XP_004163050.1| PREDICTED: uridylate kinase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|218189798|gb|EEC72225.1| hypothetical protein OsI_05332 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
| >gi|115442427|ref|NP_001045493.1| Os01g0965400 [Oryza sativa Japonica Group] gi|57900163|dbj|BAD88248.1| putative UMP-kinase [Oryza sativa Japonica Group] gi|113535024|dbj|BAF07407.1| Os01g0965400 [Oryza sativa Japonica Group] gi|215697542|dbj|BAG91536.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740796|dbj|BAG96952.1| unnamed protein product [Oryza sativa Japonica Group] gi|222619931|gb|EEE56063.1| hypothetical protein OsJ_04876 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
| >gi|296088581|emb|CBI37572.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357131781|ref|XP_003567512.1| PREDICTED: uridylate kinase-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 239 | ||||||
| TAIR|locus:2093949 | 339 | AT3G18680 [Arabidopsis thalian | 0.866 | 0.610 | 0.742 | 1.2e-74 | |
| TIGR_CMR|CHY_1785 | 242 | CHY_1785 "uridylate kinase" [C | 0.635 | 0.628 | 0.629 | 9.8e-48 | |
| TIGR_CMR|GSU_1919 | 239 | GSU_1919 "uridylate kinase" [G | 0.640 | 0.640 | 0.621 | 6.9e-47 | |
| TIGR_CMR|BA_3963 | 240 | BA_3963 "uridylate kinase" [Ba | 0.640 | 0.637 | 0.621 | 3e-46 | |
| TIGR_CMR|SPO_1662 | 251 | SPO_1662 "uridylate kinase" [R | 0.648 | 0.617 | 0.598 | 9.1e-45 | |
| TIGR_CMR|DET_0375 | 241 | DET_0375 "uridylate kinase" [D | 0.623 | 0.618 | 0.613 | 1.9e-42 | |
| TIGR_CMR|ECH_0266 | 244 | ECH_0266 "uridylate kinase" [E | 0.648 | 0.635 | 0.548 | 3.7e-39 | |
| TAIR|locus:2100108 | 542 | AT3G10030 [Arabidopsis thalian | 0.778 | 0.343 | 0.487 | 9.9e-39 | |
| TIGR_CMR|CJE_1410 | 239 | CJE_1410 "uridylate kinase" [C | 0.619 | 0.619 | 0.574 | 2.6e-38 | |
| TIGR_CMR|APH_0111 | 244 | APH_0111 "uridylate kinase" [A | 0.619 | 0.606 | 0.56 | 3.4e-38 |
| TAIR|locus:2093949 AT3G18680 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 159/214 (74%), Positives = 179/214 (83%)
Query: 32 SFHNHQQTSNGRLVVNCCSS--SDMGSAQNPTNGRQ----PQMSSMSPFGVTLNDNGMSK 85
+F ++Q S R++++C SS SD GS+ + NG ++ S F + +G SK
Sbjct: 33 TFFSNQNYSR-RVLISCSSSLSSDNGSSPDSMNGNGNGNGSSLNGQSSFPRLPSFDGTSK 91
Query: 86 PSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGA 145
P KW+RVLLKVSGEALAGD QNIDPK+TMAIAREVA+VTRLGIEVAIVVGGGNIFRG+
Sbjct: 92 PPLKWRRVLLKVSGEALAGDEEQNIDPKVTMAIAREVAAVTRLGIEVAIVVGGGNIFRGS 151
Query: 146 SAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAV 205
+ AG SGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRA+
Sbjct: 152 TWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAI 211
Query: 206 RHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEIS 239
RHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEI+
Sbjct: 212 RHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEIN 245
|
|
| TIGR_CMR|CHY_1785 CHY_1785 "uridylate kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|GSU_1919 GSU_1919 "uridylate kinase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|BA_3963 BA_3963 "uridylate kinase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|SPO_1662 SPO_1662 "uridylate kinase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|DET_0375 DET_0375 "uridylate kinase" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|ECH_0266 ECH_0266 "uridylate kinase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2100108 AT3G10030 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CJE_1410 CJE_1410 "uridylate kinase" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|APH_0111 APH_0111 "uridylate kinase" [Anaplasma phagocytophilum HZ (taxid:212042)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 239 | |||
| cd04254 | 231 | cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, t | 1e-94 | |
| PRK00358 | 231 | PRK00358, pyrH, uridylate kinase; Provisional | 1e-89 | |
| cd04239 | 229 | cd04239, AAK_UMPK-like, AAK_UMPK-like: UMP kinase | 2e-77 | |
| COG0528 | 238 | COG0528, PyrH, Uridylate kinase [Nucleotide transp | 6e-76 | |
| TIGR02075 | 232 | TIGR02075, pyrH_bact, uridylate kinase | 7e-75 | |
| PRK14557 | 247 | PRK14557, pyrH, uridylate kinase; Provisional | 9e-42 | |
| PRK14558 | 231 | PRK14558, pyrH, uridylate kinase; Provisional | 2e-40 | |
| PRK14556 | 249 | PRK14556, pyrH, uridylate kinase; Provisional | 1e-31 | |
| cd02115 | 248 | cd02115, AAK, Amino Acid Kinases (AAK) superfamily | 1e-09 | |
| pfam00696 | 230 | pfam00696, AA_kinase, Amino acid kinase family | 1e-08 | |
| cd04253 | 221 | cd04253, AAK_UMPK-PyrH-Pf, AAK_UMPK-PyrH-Pf: UMP k | 2e-08 | |
| TIGR02076 | 221 | TIGR02076, pyrH_arch, uridylate kinase, putative | 8e-08 |
| >gnl|CDD|239787 cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
Score = 276 bits (709), Expect = 1e-94
Identities = 104/148 (70%), Positives = 123/148 (83%), Gaps = 1/148 (0%)
Query: 91 QRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGN 150
+RVLLK+SGEALAG++ IDP++ IARE+ V LG+EVAIVVGGGNIFRGASAA
Sbjct: 1 KRVLLKLSGEALAGENGFGIDPEVLNRIAREIKEVVDLGVEVAIVVGGGNIFRGASAAEA 60
Query: 151 SGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEK 210
G+DR++ADY+GMLATV+NA+ LQ +ES+G+ TRV +A M VAEPYIRRRA+RHLEK
Sbjct: 61 -GMDRATADYMGMLATVINALALQDALESLGVKTRVMSAIPMQGVAEPYIRRRAIRHLEK 119
Query: 211 GRVVIFAAGTGNPFFTTDTAAALRCAEI 238
GRVVIFA GTGNPFFTTDTAAALR EI
Sbjct: 120 GRVVIFAGGTGNPFFTTDTAAALRAIEI 147
|
The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 231 |
| >gnl|CDD|234735 PRK00358, pyrH, uridylate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239772 cd04239, AAK_UMPK-like, AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
| >gnl|CDD|223602 COG0528, PyrH, Uridylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|213681 TIGR02075, pyrH_bact, uridylate kinase | Back alignment and domain information |
|---|
| >gnl|CDD|173022 PRK14557, pyrH, uridylate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173023 PRK14558, pyrH, uridylate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173021 PRK14556, pyrH, uridylate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239033 cd02115, AAK, Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) | Back alignment and domain information |
|---|
| >gnl|CDD|216067 pfam00696, AA_kinase, Amino acid kinase family | Back alignment and domain information |
|---|
| >gnl|CDD|239786 cd04253, AAK_UMPK-PyrH-Pf, AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
| >gnl|CDD|233711 TIGR02076, pyrH_arch, uridylate kinase, putative | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 239 | |||
| COG0528 | 238 | PyrH Uridylate kinase [Nucleotide transport and me | 100.0 | |
| PRK14556 | 249 | pyrH uridylate kinase; Provisional | 100.0 | |
| PRK14557 | 247 | pyrH uridylate kinase; Provisional | 100.0 | |
| TIGR02075 | 233 | pyrH_bact uridylate kinase. This protein, also cal | 99.95 | |
| PRK14558 | 231 | pyrH uridylate kinase; Provisional | 99.94 | |
| cd04235 | 308 | AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes bot | 99.94 | |
| PRK00358 | 231 | pyrH uridylate kinase; Provisional | 99.94 | |
| cd04254 | 231 | AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbi | 99.93 | |
| cd04239 | 229 | AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-lik | 99.91 | |
| cd04253 | 221 | AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMP | 99.88 | |
| PRK12454 | 313 | carbamate kinase-like carbamoyl phosphate syntheta | 99.87 | |
| TIGR02076 | 221 | pyrH_arch uridylate kinase, putative. This family | 99.86 | |
| cd04255 | 262 | AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes th | 99.86 | |
| cd04240 | 203 | AAK_UC AAK_UC: Uncharacterized (UC) amino acid kin | 99.85 | |
| TIGR00746 | 310 | arcC carbamate kinase. The seed alignment for this | 99.82 | |
| PRK12353 | 314 | putative amino acid kinase; Reviewed | 99.8 | |
| cd04241 | 252 | AAK_FomA-like AAK_FomA-like: This CD includes a fo | 99.73 | |
| cd02115 | 248 | AAK Amino Acid Kinases (AAK) superfamily, catalyti | 99.6 | |
| TIGR00656 | 401 | asp_kin_monofn aspartate kinase, monofunctional cl | 99.57 | |
| cd04246 | 239 | AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kina | 99.54 | |
| cd04261 | 239 | AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kina | 99.52 | |
| PRK12354 | 307 | carbamate kinase; Reviewed | 99.47 | |
| PRK06635 | 404 | aspartate kinase; Reviewed | 99.45 | |
| PTZ00489 | 264 | glutamate 5-kinase; Provisional | 99.45 | |
| PF00696 | 242 | AA_kinase: Amino acid kinase family Match to Gluta | 99.42 | |
| TIGR01027 | 363 | proB glutamate 5-kinase. Bacterial ProB proteins h | 99.41 | |
| PRK13402 | 368 | gamma-glutamyl kinase; Provisional | 99.4 | |
| COG1608 | 252 | Predicted archaeal kinase [General function predic | 99.39 | |
| PRK07431 | 587 | aspartate kinase; Provisional | 99.37 | |
| PRK14058 | 268 | acetylglutamate/acetylaminoadipate kinase; Provisi | 99.33 | |
| cd04234 | 227 | AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK) | 99.33 | |
| PRK09411 | 297 | carbamate kinase; Reviewed | 99.32 | |
| PRK12314 | 266 | gamma-glutamyl kinase; Provisional | 99.32 | |
| cd04256 | 284 | AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase | 99.32 | |
| cd04242 | 251 | AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K | 99.31 | |
| PRK08210 | 403 | aspartate kinase I; Reviewed | 99.29 | |
| cd04260 | 244 | AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase | 99.29 | |
| TIGR00761 | 231 | argB acetylglutamate kinase. This model describes | 99.28 | |
| PRK05429 | 372 | gamma-glutamyl kinase; Provisional | 99.28 | |
| PRK12686 | 312 | carbamate kinase; Reviewed | 99.28 | |
| PRK12352 | 316 | putative carbamate kinase; Reviewed | 99.27 | |
| COG0549 | 312 | ArcC Carbamate kinase [Amino acid transport and me | 99.26 | |
| PLN02512 | 309 | acetylglutamate kinase | 99.26 | |
| cd04238 | 256 | AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate | 99.23 | |
| CHL00202 | 284 | argB acetylglutamate kinase; Provisional | 99.22 | |
| cd04250 | 279 | AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase | 99.2 | |
| PRK00942 | 283 | acetylglutamate kinase; Provisional | 99.19 | |
| cd04249 | 252 | AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kina | 99.19 | |
| cd04237 | 280 | AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) | 99.18 | |
| cd04251 | 257 | AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kina | 99.16 | |
| PRK08841 | 392 | aspartate kinase; Validated | 99.16 | |
| cd04252 | 248 | AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutam | 99.16 | |
| PRK05279 | 441 | N-acetylglutamate synthase; Validated | 98.97 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 98.92 | |
| cd04236 | 271 | AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NA | 98.9 | |
| PRK04531 | 398 | acetylglutamate kinase; Provisional | 98.83 | |
| TIGR01890 | 429 | N-Ac-Glu-synth amino-acid N-acetyltransferase. Thi | 98.82 | |
| cd04245 | 288 | AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Ki | 98.78 | |
| TIGR00657 | 441 | asp_kinases aspartate kinase. The Lys-sensitive en | 98.72 | |
| TIGR02078 | 327 | AspKin_pair Pyrococcus aspartate kinase subunit, p | 98.71 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 98.67 | |
| PRK08373 | 341 | aspartate kinase; Validated | 98.67 | |
| PLN02825 | 515 | amino-acid N-acetyltransferase | 98.6 | |
| cd04258 | 292 | AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Ki | 98.58 | |
| PRK06291 | 465 | aspartate kinase; Provisional | 98.56 | |
| COG0548 | 265 | ArgB Acetylglutamate kinase [Amino acid transport | 98.53 | |
| cd04244 | 298 | AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kina | 98.51 | |
| COG2054 | 212 | Uncharacterized archaeal kinase related to asparto | 98.37 | |
| COG0527 | 447 | LysC Aspartokinases [Amino acid transport and meta | 98.22 | |
| cd04243 | 293 | AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kina | 97.99 | |
| cd04259 | 295 | AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Super | 97.98 | |
| cd04257 | 294 | AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfa | 97.94 | |
| KOG1154 | 285 | consensus Gamma-glutamyl kinase [Amino acid transp | 97.89 | |
| COG0263 | 369 | ProB Glutamate 5-kinase [Amino acid transport and | 97.88 | |
| PRK09034 | 454 | aspartate kinase; Reviewed | 97.86 | |
| PRK09084 | 448 | aspartate kinase III; Validated | 97.76 | |
| PRK09436 | 819 | thrA bifunctional aspartokinase I/homoserine dehyd | 96.98 | |
| PRK08961 | 861 | bifunctional aspartate kinase/diaminopimelate deca | 96.91 | |
| PLN02551 | 521 | aspartokinase | 96.89 | |
| PRK09466 | 810 | metL bifunctional aspartate kinase II/homoserine d | 95.92 | |
| PRK05925 | 440 | aspartate kinase; Provisional | 95.86 | |
| cd04247 | 306 | AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfa | 95.84 | |
| KOG2436 | 520 | consensus Acetylglutamate kinase/acetylglutamate s | 91.68 | |
| cd06259 | 150 | YdcF-like YdcF-like. YdcF-like is a large family o | 87.32 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 84.8 |
| >COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-50 Score=359.96 Aligned_cols=150 Identities=63% Similarity=0.957 Sum_probs=145.9
Q ss_pred cccEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEECCChhhhhhhhhhhcCCCccchhHHHHHHHHH
Q 026370 89 KWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVM 168 (239)
Q Consensus 89 ~~krIVIKLGGsaL~~d~~~gid~~~l~~iA~~I~~l~~~G~~I~IV~GGGniaRg~~~Ar~~Gi~r~~aD~IGMlAT~L 168 (239)
+|||||||||||+|.++++++||++.++++|++|+++.+.|+||+||+||||+||||..+. .|++|..+|||||+||+|
T Consensus 4 ~~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~g~eV~iVvGGGni~Rg~~~~~-~g~~r~~~D~mGmlaTvm 82 (238)
T COG0528 4 KYMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDLGVEVAVVVGGGNIARGYIGAA-AGMDRVTADYMGMLATVM 82 (238)
T ss_pred ceEEEEEEeecceecCCCCCCCCHHHHHHHHHHHHHHHhcCcEEEEEECCCHHHHhHHHHH-cCCchhhhhHHHHHHHHH
Confidence 6999999999999999888999999999999999999999999999999999999997665 499999999999999999
Q ss_pred HHHHHHHHHHhcCCCceEEeccccCcccccchHHHHHHHHhCCCEEEEeCCCCCccccchHHHHHHhhhcC
Q 026370 169 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEIS 239 (239)
Q Consensus 169 NAllL~~aL~~~gi~a~v~SAi~i~~i~e~y~~~ea~~~L~~G~IvVfagGtg~P~fTTDt~AAlrA~Ei~ 239 (239)
||++|+++|+..+++++|+|++.+++++++|+++++.++|++|+||||+||||+|||||||+|||||+||+
T Consensus 83 Nal~L~~aL~~~~~~~~v~sai~~~~~~e~~~~~~A~~~l~~grVvIf~gGtg~P~fTTDt~AALrA~ei~ 153 (238)
T COG0528 83 NALALQDALERLGVDTRVQSAIAMPQVAEPYSRREAIRHLEKGRVVIFGGGTGNPGFTTDTAAALRAEEIE 153 (238)
T ss_pred HHHHHHHHHHhcCCcceecccccCccccCccCHHHHHHHHHcCCEEEEeCCCCCCCCchHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999985
|
|
| >PRK14556 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK14557 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02075 pyrH_bact uridylate kinase | Back alignment and domain information |
|---|
| >PRK14558 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
| >cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP | Back alignment and domain information |
|---|
| >PRK00358 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
| >cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
| >cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
| >cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
| >PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed | Back alignment and domain information |
|---|
| >TIGR02076 pyrH_arch uridylate kinase, putative | Back alignment and domain information |
|---|
| >cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
| >cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria | Back alignment and domain information |
|---|
| >TIGR00746 arcC carbamate kinase | Back alignment and domain information |
|---|
| >PRK12353 putative amino acid kinase; Reviewed | Back alignment and domain information |
|---|
| >cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms | Back alignment and domain information |
|---|
| >cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) | Back alignment and domain information |
|---|
| >TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class | Back alignment and domain information |
|---|
| >cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes | Back alignment and domain information |
|---|
| >cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences | Back alignment and domain information |
|---|
| >PRK12354 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
| >PRK06635 aspartate kinase; Reviewed | Back alignment and domain information |
|---|
| >PTZ00489 glutamate 5-kinase; Provisional | Back alignment and domain information |
|---|
| >PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families | Back alignment and domain information |
|---|
| >TIGR01027 proB glutamate 5-kinase | Back alignment and domain information |
|---|
| >PRK13402 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
| >COG1608 Predicted archaeal kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK07431 aspartate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional | Back alignment and domain information |
|---|
| >cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;) | Back alignment and domain information |
|---|
| >PRK09411 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
| >PRK12314 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
| >cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis | Back alignment and domain information |
|---|
| >cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis | Back alignment and domain information |
|---|
| >PRK08210 aspartate kinase I; Reviewed | Back alignment and domain information |
|---|
| >cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species | Back alignment and domain information |
|---|
| >TIGR00761 argB acetylglutamate kinase | Back alignment and domain information |
|---|
| >PRK05429 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
| >PRK12686 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
| >PRK12352 putative carbamate kinase; Reviewed | Back alignment and domain information |
|---|
| >COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02512 acetylglutamate kinase | Back alignment and domain information |
|---|
| >cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
| >CHL00202 argB acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
| >cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
| >PRK00942 acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
| >cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
| >cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
| >cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC) | Back alignment and domain information |
|---|
| >PRK08841 aspartate kinase; Validated | Back alignment and domain information |
|---|
| >cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP) | Back alignment and domain information |
|---|
| >PRK05279 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
| >cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals | Back alignment and domain information |
|---|
| >PRK04531 acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
| >cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species | Back alignment and domain information |
|---|
| >TIGR00657 asp_kinases aspartate kinase | Back alignment and domain information |
|---|
| >TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative | Back alignment and domain information |
|---|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
| >PRK08373 aspartate kinase; Validated | Back alignment and domain information |
|---|
| >PLN02825 amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
| >cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII | Back alignment and domain information |
|---|
| >PRK06291 aspartate kinase; Provisional | Back alignment and domain information |
|---|
| >COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants | Back alignment and domain information |
|---|
| >COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only] | Back alignment and domain information |
|---|
| >COG0527 LysC Aspartokinases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH) | Back alignment and domain information |
|---|
| >cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria | Back alignment and domain information |
|---|
| >cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH) | Back alignment and domain information |
|---|
| >KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09034 aspartate kinase; Reviewed | Back alignment and domain information |
|---|
| >PRK09084 aspartate kinase III; Validated | Back alignment and domain information |
|---|
| >PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional | Back alignment and domain information |
|---|
| >PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional | Back alignment and domain information |
|---|
| >PLN02551 aspartokinase | Back alignment and domain information |
|---|
| >PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional | Back alignment and domain information |
|---|
| >PRK05925 aspartate kinase; Provisional | Back alignment and domain information |
|---|
| >cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains | Back alignment and domain information |
|---|
| >KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd06259 YdcF-like YdcF-like | Back alignment and domain information |
|---|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 239 | ||||
| 3ek5_A | 243 | Unique Gtp-Binding Pocket And Allostery Of Ump Kina | 7e-47 | ||
| 1z9d_A | 252 | Crystal Structure Of A Putative Uridylate Kinase (U | 2e-42 | ||
| 3nwy_A | 281 | Structure And Allosteric Regulation Of The Uridine | 3e-41 | ||
| 4a7w_A | 240 | Crystal Structure Of Uridylate Kinase From Helicoba | 1e-38 | ||
| 2a1f_A | 247 | Crystal Structure Of Uridylate Kinase Length = 247 | 2e-34 | ||
| 1ybd_A | 239 | Crystal Structure Analysis Of Uridylate Kinase From | 7e-33 | ||
| 2bnd_A | 241 | The Structure Of E.Coli Ump Kinase In Complex With | 9e-32 | ||
| 2bne_A | 241 | The Structure Of E. Coli Ump Kinase In Complex With | 1e-31 | ||
| 2jjx_A | 255 | The Crystal Structure Of Ump Kinase From Bacillus A | 2e-30 | ||
| 2bnf_A | 241 | The Structure Of E. Coli Ump Kinase In Complex With | 1e-28 | ||
| 2va1_A | 256 | Crystal Structure Of Ump Kinase From Ureaplasma Par | 1e-21 |
| >pdb|3EK5|A Chain A, Unique Gtp-Binding Pocket And Allostery Of Ump Kinase From A Gram- Negative Phytopathogen Bacterium Length = 243 | Back alignment and structure |
|
| >pdb|1Z9D|A Chain A, Crystal Structure Of A Putative Uridylate Kinase (Ump-Kinase) From Streptococcus Pyogenes Length = 252 | Back alignment and structure |
| >pdb|3NWY|A Chain A, Structure And Allosteric Regulation Of The Uridine Monophosphate Kinase From Mycobacterium Tuberculosis Length = 281 | Back alignment and structure |
| >pdb|4A7W|A Chain A, Crystal Structure Of Uridylate Kinase From Helicobacter Pylori Length = 240 | Back alignment and structure |
| >pdb|2A1F|A Chain A, Crystal Structure Of Uridylate Kinase Length = 247 | Back alignment and structure |
| >pdb|1YBD|A Chain A, Crystal Structure Analysis Of Uridylate Kinase From Neisseria Meningitidis Length = 239 | Back alignment and structure |
| >pdb|2BND|A Chain A, The Structure Of E.Coli Ump Kinase In Complex With Udp Length = 241 | Back alignment and structure |
| >pdb|2BNE|A Chain A, The Structure Of E. Coli Ump Kinase In Complex With Ump Length = 241 | Back alignment and structure |
| >pdb|2JJX|A Chain A, The Crystal Structure Of Ump Kinase From Bacillus Anthracis (Ba1797) Length = 255 | Back alignment and structure |
| >pdb|2BNF|A Chain A, The Structure Of E. Coli Ump Kinase In Complex With Utp Length = 241 | Back alignment and structure |
| >pdb|2VA1|A Chain A, Crystal Structure Of Ump Kinase From Ureaplasma Parvum Length = 256 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 239 | |||
| 4a7w_A | 240 | Uridylate kinase; transferase; HET: GTP; 1.80A {He | 7e-61 | |
| 2ogx_B | 270 | Molybdenum storage protein subunit beta; open alph | 1e-60 | |
| 2a1f_A | 247 | Uridylate kinase; PYRH, structural genomics, PSI, | 4e-60 | |
| 3ek6_A | 243 | Uridylate kinase; UMPK unique GTP B site, alloster | 2e-59 | |
| 1ybd_A | 239 | Uridylate kinase; alpha/beta/alpha fold, hexamer, | 3e-57 | |
| 1z9d_A | 252 | Uridylate kinase, UK, UMP kinase; structural genom | 4e-57 | |
| 2brx_A | 244 | Uridylate kinase; UMP kinase, amino acid kinase, p | 5e-57 | |
| 2jjx_A | 255 | Uridylate kinase, UMP kinase; structural genomics, | 3e-56 | |
| 2va1_A | 256 | Uridylate kinase; UMPK, transferase, pyrimidine bi | 5e-56 | |
| 2j4j_A | 226 | Uridylate kinase; transferase, nucleoside monophos | 2e-55 | |
| 3nwy_A | 281 | Uridylate kinase; allosterically activated form, A | 6e-54 | |
| 2ij9_A | 219 | Uridylate kinase; structural genomics, protein str | 9e-52 | |
| 2ogx_A | 276 | Molybdenum storage protein subunit alpha; open alp | 3e-38 | |
| 3k4o_A | 266 | Isopentenyl phosphate kinase; small molecule kinas | 5e-23 |
| >4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A* Length = 240 | Back alignment and structure |
|---|
Score = 190 bits (484), Expect = 7e-61
Identities = 91/156 (58%), Positives = 112/156 (71%), Gaps = 2/156 (1%)
Query: 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIF 142
+K K RVL+K SGEALAGD+ ID + IA+E+ S+ IEV IV+GGGNI
Sbjct: 2 QAKIKNK--RVLVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGGNII 59
Query: 143 RGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRR 202
RG SAA + R+S DY+GMLATV+NA+ +Q +E IG+ TRVQ+A + E+ E YI R
Sbjct: 60 RGVSAAQGGIIRRTSGDYMGMLATVINAVAMQEALEHIGLDTRVQSAIEIKEICESYIYR 119
Query: 203 RAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEI 238
+A+RHLEKGRVVIF AGTGNPFFTTDTAA LR EI
Sbjct: 120 KAIRHLEKGRVVIFGAGTGNPFFTTDTAATLRAIEI 155
|
| >2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} Length = 270 | Back alignment and structure |
|---|
| >2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A* Length = 247 | Back alignment and structure |
|---|
| >3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} PDB: 3ek5_A Length = 243 | Back alignment and structure |
|---|
| >1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3 Length = 239 | Back alignment and structure |
|---|
| >1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3 Length = 252 | Back alignment and structure |
|---|
| >2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A* Length = 244 | Back alignment and structure |
|---|
| >2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis} Length = 255 | Back alignment and structure |
|---|
| >2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum} Length = 256 | Back alignment and structure |
|---|
| >2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A* Length = 226 | Back alignment and structure |
|---|
| >3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis} Length = 281 | Back alignment and structure |
|---|
| >2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3 Length = 219 | Back alignment and structure |
|---|
| >2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} Length = 276 | Back alignment and structure |
|---|
| >3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A* Length = 266 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 239 | |||
| 3ek6_A | 243 | Uridylate kinase; UMPK unique GTP B site, alloster | 100.0 | |
| 3nwy_A | 281 | Uridylate kinase; allosterically activated form, A | 99.97 | |
| 4a7w_A | 240 | Uridylate kinase; transferase; HET: GTP; 1.80A {He | 99.97 | |
| 2jjx_A | 255 | Uridylate kinase, UMP kinase; structural genomics, | 99.95 | |
| 2va1_A | 256 | Uridylate kinase; UMPK, transferase, pyrimidine bi | 99.95 | |
| 1ybd_A | 239 | Uridylate kinase; alpha/beta/alpha fold, hexamer, | 99.95 | |
| 2a1f_A | 247 | Uridylate kinase; PYRH, structural genomics, PSI, | 99.94 | |
| 1z9d_A | 252 | Uridylate kinase, UK, UMP kinase; structural genom | 99.94 | |
| 2brx_A | 244 | Uridylate kinase; UMP kinase, amino acid kinase, p | 99.9 | |
| 2j4j_A | 226 | Uridylate kinase; transferase, nucleoside monophos | 99.88 | |
| 3ll5_A | 249 | Gamma-glutamyl kinase related protein; alternate m | 99.87 | |
| 3k4o_A | 266 | Isopentenyl phosphate kinase; small molecule kinas | 99.86 | |
| 2ij9_A | 219 | Uridylate kinase; structural genomics, protein str | 99.85 | |
| 3kzf_A | 317 | Carbamate kinase; arginine dihydrolase pathway, gi | 99.84 | |
| 3ll9_A | 269 | Isopentenyl phosphate kinase; mevalonate biosynthe | 99.81 | |
| 2ogx_A | 276 | Molybdenum storage protein subunit alpha; open alp | 99.78 | |
| 2ogx_B | 270 | Molybdenum storage protein subunit beta; open alph | 99.78 | |
| 2we5_A | 310 | Carbamate kinase 1; arginine catabolism, arginine | 99.74 | |
| 1e19_A | 314 | Carbamate kinase-like carbamoylphosphate synthetas | 99.7 | |
| 2e9y_A | 316 | Carbamate kinase; transferase, structural genomics | 99.7 | |
| 1gs5_A | 258 | Acetylglutamate kinase; carbamate kinase, amino ac | 99.69 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 99.68 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 99.67 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 99.66 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 99.66 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 99.66 | |
| 3d40_A | 286 | FOMA protein; fosfomycin, antibiotic resistance, k | 99.66 | |
| 2ako_A | 251 | Glutamate 5-kinase; structural genomics, PSI, prot | 99.61 | |
| 2egx_A | 269 | Putative acetylglutamate kinase; struc genomics, N | 99.6 | |
| 3l76_A | 600 | Aspartokinase; allostery, ACT domains, kinase tran | 99.58 | |
| 2j5v_A | 367 | Glutamate 5-kinase; proline biosynthesis, gamma gl | 99.55 | |
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 99.5 | |
| 3l86_A | 279 | Acetylglutamate kinase; ARGB, amino-acid biosynthe | 99.44 | |
| 3zzh_A | 307 | Acetylglutamate kinase; transferase, arginine bios | 99.41 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 99.4 | |
| 3ab4_A | 421 | Aspartokinase; aspartate kinase, concerted inhibit | 99.38 | |
| 4axs_A | 332 | Carbamate kinase; oxidoreductase; 2.50A {Mycoplasm | 99.38 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 99.29 | |
| 3s6k_A | 467 | Acetylglutamate kinase; synthase, transferase; 2.8 | 99.17 | |
| 3c1m_A | 473 | Probable aspartokinase; allosteric inhibition, thr | 98.9 | |
| 2cdq_A | 510 | Aspartokinase; aspartate kinase, amino acid metabo | 98.49 | |
| 2j0w_A | 449 | Lysine-sensitive aspartokinase 3; feedback inhibit | 98.48 | |
| 3tvi_A | 446 | Aspartokinase; structural genomics, ACT domains, r | 97.92 |
| >3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=247.13 Aligned_cols=154 Identities=56% Similarity=0.918 Sum_probs=144.1
Q ss_pred CCCCCCcccEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEECCChhhhhhhhhhhcCCCccchhHHH
Q 026370 83 MSKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIG 162 (239)
Q Consensus 83 ~~~~~~~~krIVIKLGGsaL~~d~~~gid~~~l~~iA~~I~~l~~~G~~I~IV~GGGniaRg~~~Ar~~Gi~r~~aD~IG 162 (239)
|++| +||||||||||++|.+++++++|.+.++++|++|+++.+.|++++||||||+++|++..+ ++|+++...|+||
T Consensus 4 ~~~~--~~~riViKlGGs~l~~~~~~~~~~~~i~~la~~i~~l~~~G~~vviV~gGG~~~~~~~~~-~~g~~~~~~d~~g 80 (243)
T 3ek6_A 4 MSEL--SYRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGNIFRGAGLA-ASGMDRVTGDHMG 80 (243)
T ss_dssp GGGC--SCSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTTSCSTTTS-CSSSCHHHHHHHH
T ss_pred cccC--cCcEEEEEEchhhccCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHH-HcCCCCCCHHHHH
Confidence 5455 699999999999999876667999999999999999999999999999999999998654 5899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEEeccccCcccccchHHHHHHHHhCCCEEEEeCCCCCccccchHHHHHHhhhcC
Q 026370 163 MLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEIS 239 (239)
Q Consensus 163 MlAT~LNAllL~~aL~~~gi~a~v~SAi~i~~i~e~y~~~ea~~~L~~G~IvVfagGtg~P~fTTDt~AAlrA~Ei~ 239 (239)
|++|++|++++..+|...|+++.++++..++.++++|+.+++.++|++|.|||+++++|+||+++|++|+++|.+++
T Consensus 81 ~l~t~~N~~~l~~al~~~G~~a~~~~~~~~~~v~~~~~~~~~~~lL~~g~IpVv~~~~g~~~~~~D~~Aa~lA~~l~ 157 (243)
T 3ek6_A 81 MLATVINALAMQDALEKLGAKVRVMSAIKINDVCEDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIG 157 (243)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEESSCBTTTBEECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEechhhcCcccCcCCHHHHHHHHHCCcEEEEECCCCCCcCChHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875
|
| >3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A* | Back alignment and structure |
|---|
| >2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis} | Back alignment and structure |
|---|
| >2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum} | Back alignment and structure |
|---|
| >1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3 | Back alignment and structure |
|---|
| >2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A* | Back alignment and structure |
|---|
| >1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3 | Back alignment and structure |
|---|
| >2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A* | Back alignment and structure |
|---|
| >2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A* | Back alignment and structure |
|---|
| >3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A* | Back alignment and structure |
|---|
| >3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A* | Back alignment and structure |
|---|
| >2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3 | Back alignment and structure |
|---|
| >3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803} | Back alignment and structure |
|---|
| >3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid} | Back alignment and structure |
|---|
| >2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} | Back alignment and structure |
|---|
| >2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} | Back alignment and structure |
|---|
| >2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A* | Back alignment and structure |
|---|
| >1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1 | Back alignment and structure |
|---|
| >2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
| >1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A* | Back alignment and structure |
|---|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 | Back alignment and structure |
|---|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 | Back alignment and structure |
|---|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 | Back alignment and structure |
|---|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* | Back alignment and structure |
|---|
| >3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A* | Back alignment and structure |
|---|
| >2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3 | Back alignment and structure |
|---|
| >3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis} | Back alignment and structure |
|---|
| >2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A | Back alignment and structure |
|---|
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* | Back alignment and structure |
|---|
| >3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} | Back alignment and structure |
|---|
| >3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A* | Back alignment and structure |
|---|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* | Back alignment and structure |
|---|
| >3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A | Back alignment and structure |
|---|
| >4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans} | Back alignment and structure |
|---|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* | Back alignment and structure |
|---|
| >3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
| >2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 | Back alignment and structure |
|---|
| >2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A* | Back alignment and structure |
|---|
| >3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 239 | ||||
| d2a1fa1 | 236 | c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophi | 1e-27 | |
| d1ybda1 | 236 | c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseri | 3e-24 | |
| d1z9da1 | 238 | c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptoc | 1e-23 | |
| d2ij9a1 | 219 | c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeog | 2e-17 | |
| d2brxa1 | 225 | c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococc | 4e-15 |
| >d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus influenzae [TaxId: 727]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Haemophilus influenzae [TaxId: 727]
Score = 103 bits (258), Expect = 1e-27
Identities = 69/155 (44%), Positives = 106/155 (68%), Gaps = 3/155 (1%)
Query: 84 SKPSYKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFR 143
S+P YK R+LLK+SGEAL G+ IDP I +A E+ + +G+EV++V+GGGN+FR
Sbjct: 1 SQPIYK--RILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFR 58
Query: 144 GASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRR 203
GA +G++R D++GMLATVMN + ++ ++ + ++ +AF+++ + + Y
Sbjct: 59 GAK-LAKAGMNRVVGDHMGMLATVMNGLAMRDSLFRADVNAKLMSAFQLNGICDTYNWSE 117
Query: 204 AVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEI 238
A++ L + RVVIF+AGTGNPFFTTD+ A LR EI
Sbjct: 118 AIKMLREKRVVIFSAGTGNPFFTTDSTACLRGIEI 152
|
| >d1ybda1 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseria meningitidis [TaxId: 487]} Length = 236 | Back information, alignment and structure |
|---|
| >d1z9da1 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptococcus pyogenes [TaxId: 1314]} Length = 238 | Back information, alignment and structure |
|---|
| >d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus fulgidus [TaxId: 2234]} Length = 219 | Back information, alignment and structure |
|---|
| >d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 2261]} Length = 225 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 239 | |||
| d2brxa1 | 225 | Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: | 99.89 | |
| d2ij9a1 | 219 | Uridylate kinase PyrH {Archaeoglobus fulgidus [Tax | 99.88 | |
| d2a1fa1 | 236 | Uridylate kinase PyrH {Haemophilus influenzae [Tax | 99.83 | |
| d1ybda1 | 236 | Uridylate kinase PyrH {Neisseria meningitidis [Tax | 99.83 | |
| d1z9da1 | 238 | Uridylate kinase PyrH {Streptococcus pyogenes [Tax | 99.76 | |
| d2akoa1 | 250 | Glutamate 5-kinase {Campylobacter jejuni [TaxId: 1 | 99.59 | |
| d1e19a_ | 313 | Carbamate kinase {Archaeon Pyrococcus furiosus [Ta | 99.3 | |
| d2btya1 | 282 | N-acetyl-l-glutamate kinase {Thermotoga maritima [ | 99.2 | |
| d2ap9a1 | 291 | N-acetyl-l-glutamate kinase {Mycobacterium tubercu | 99.17 | |
| d1b7ba_ | 307 | Carbamate kinase {Enterococcus faecium [TaxId: 135 | 99.11 | |
| d2bufa1 | 300 | N-acetyl-l-glutamate kinase {Pseudomonas aeruginos | 99.08 | |
| d1gs5a_ | 258 | N-acetyl-l-glutamate kinase {Escherichia coli [Tax | 99.02 | |
| d2cdqa1 | 304 | Aspartokinase {Thale cress (Arabidopsis thaliana) | 97.98 | |
| d2hmfa1 | 302 | Aspartokinase {Methanococcus jannaschii [TaxId: 21 | 97.52 | |
| d2j0wa1 | 292 | Aspartokinase {Escherichia coli [TaxId: 562]} | 97.04 |
| >d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Pyrococcus furiosus [TaxId: 2261]
Probab=99.89 E-value=6.6e-23 Score=173.94 Aligned_cols=131 Identities=28% Similarity=0.424 Sum_probs=116.6
Q ss_pred cEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEECCChhhhhh-hhhhhcCCCccchhHHHHHHHHHH
Q 026370 91 QRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGA-SAAGNSGLDRSSADYIGMLATVMN 169 (239)
Q Consensus 91 krIVIKLGGsaL~~d~~~gid~~~l~~iA~~I~~l~~~G~~I~IV~GGGniaRg~-~~Ar~~Gi~r~~aD~IGMlAT~LN 169 (239)
||||||+||+.|++++ .+.+++++++++|+++.+ |++++||||||+++|++ +.++++++++..+|++++..+++|
T Consensus 1 MrIViKiGGs~l~~~~---~~~~~i~~l~~~I~~l~~-~~~~viV~ggG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (225)
T d2brxa1 1 MRIVFDIGGSVLVPEN---PDIDFIKEIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAEKFNSSETFKDFIGIQITRAN 76 (225)
T ss_dssp CEEEEEECHHHHCSSS---CCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred CeEEEEeehhhcCCCC---CCHHHHHHHHHHHHHHHc-CCcEEEEECccHHHHHHHHhhhhcchhhHHHHHhhhhHHHHH
Confidence 6999999999998764 378999999999999876 68999999999999998 777889999999999999999999
Q ss_pred HHHHHHHHHhcCCCceEEeccccCcccccchHHHHHHHHhCCCEEEEeCCCCCccccchHHHHHHhhhcC
Q 026370 170 AIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEIS 239 (239)
Q Consensus 170 AllL~~aL~~~gi~a~v~SAi~i~~i~e~y~~~ea~~~L~~G~IvVfagGtg~P~fTTDt~AAlrA~Ei~ 239 (239)
++++++.|+..+++... +++ .+..++++.+.|||+ +.++||+|||+.||++|.+++
T Consensus 77 ~~~~~~~l~~~~~~~~~----------~~~--~~~~~~l~~~~ipv~--~~~~~~~~~D~lAa~lA~~l~ 132 (225)
T d2brxa1 77 AMLLIAALREKAYPVVV----------EDF--WEAWKAVQLKKIPVM--GGTHPGHTTDAVAALLAEFLK 132 (225)
T ss_dssp HHHHHHHHGGGBCSSCB----------CSH--HHHHHHHHTTCBCEE--CCCSTTCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhccccc----------ccH--HHHHHHHHhcccccc--cCCCCCcchhHHHHHHHHHhC
Confidence 99999999998887432 333 577889999999998 889999999999999999875
|
| >d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1ybda1 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
| >d1z9da1 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d2akoa1 c.73.1.3 (A:2-251) Glutamate 5-kinase {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
| >d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2cdqa1 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2hmfa1 c.73.1.3 (A:2-303) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d2j0wa1 c.73.1.3 (A:3-294) Aspartokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|