Citrus Sinensis ID: 026379
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 239 | ||||||
| 351726728 | 223 | uncharacterized protein LOC100305626 [Gl | 0.895 | 0.959 | 0.683 | 8e-84 | |
| 357448211 | 226 | hypothetical protein MTR_2g028000 [Medic | 0.866 | 0.915 | 0.698 | 3e-82 | |
| 356532914 | 230 | PREDICTED: uncharacterized protein LOC10 | 0.916 | 0.952 | 0.662 | 5e-82 | |
| 224124874 | 194 | predicted protein [Populus trichocarpa] | 0.769 | 0.948 | 0.788 | 2e-80 | |
| 224086273 | 207 | predicted protein [Populus trichocarpa] | 0.728 | 0.840 | 0.798 | 4e-79 | |
| 359497359 | 227 | PREDICTED: uncharacterized protein LOC10 | 0.807 | 0.850 | 0.725 | 9e-76 | |
| 449434068 | 233 | PREDICTED: uncharacterized protein LOC10 | 0.878 | 0.901 | 0.656 | 9e-76 | |
| 296088209 | 234 | unnamed protein product [Vitis vinifera] | 0.807 | 0.824 | 0.725 | 1e-75 | |
| 255568532 | 262 | conserved hypothetical protein [Ricinus | 0.728 | 0.664 | 0.770 | 4e-74 | |
| 414589256 | 253 | TPA: hypothetical protein ZEAMMB73_86164 | 0.836 | 0.790 | 0.666 | 1e-71 |
| >gi|351726728|ref|NP_001238160.1| uncharacterized protein LOC100305626 [Glycine max] gi|255626127|gb|ACU13408.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 315 bits (808), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 149/218 (68%), Positives = 180/218 (82%), Gaps = 4/218 (1%)
Query: 24 CPSIIKKNYYSSVKREHSGRLASQSLVIETNVTGTAE----DQSVARRLILLRHAKSSWE 79
C S + + Y S +R+ + A SL+++ T E SV+RRLILLRHAKSSW+
Sbjct: 6 CNSAVSLSPYHSCRRKPNRLRAKSSLLVQKQDTQLGEPLSDSVSVSRRLILLRHAKSSWD 65
Query: 80 FPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLE 139
SLRDHDRPLSK+G++DA++VS+RLQQLGWIP+LILSSDA RT++TL+IMQ+ VQ +E
Sbjct: 66 NRSLRDHDRPLSKSGKEDAVRVSRRLQQLGWIPELILSSDAARTKETLKIMQEQVQELVE 125
Query: 140 AEVHFISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRGWEEAASMFTGAFIE 199
AEVHF+SSFYS+AAMDGQTAEHLQK IC+YSRDEILT+MCMGHNRGWEEAASMF+GA +E
Sbjct: 126 AEVHFVSSFYSIAAMDGQTAEHLQKIICRYSRDEILTIMCMGHNRGWEEAASMFSGATVE 185
Query: 200 LKTCNAALLETTGKSWEEAFTAAGLGGWKLQGIVTPTS 237
LKTCNAALLET GKSW+EAF AG GGWKLQGI+ P+S
Sbjct: 186 LKTCNAALLETAGKSWDEAFATAGFGGWKLQGIIKPSS 223
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357448211|ref|XP_003594381.1| hypothetical protein MTR_2g028000 [Medicago truncatula] gi|355483429|gb|AES64632.1| hypothetical protein MTR_2g028000 [Medicago truncatula] gi|388502702|gb|AFK39417.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356532914|ref|XP_003535014.1| PREDICTED: uncharacterized protein LOC100789290 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224124874|ref|XP_002329970.1| predicted protein [Populus trichocarpa] gi|222871992|gb|EEF09123.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224086273|ref|XP_002307839.1| predicted protein [Populus trichocarpa] gi|222853815|gb|EEE91362.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|359497359|ref|XP_002264671.2| PREDICTED: uncharacterized protein LOC100247110, partial [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449434068|ref|XP_004134818.1| PREDICTED: uncharacterized protein LOC101211960 [Cucumis sativus] gi|449508742|ref|XP_004163398.1| PREDICTED: uncharacterized protein LOC101223568 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|296088209|emb|CBI35724.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255568532|ref|XP_002525240.1| conserved hypothetical protein [Ricinus communis] gi|223535537|gb|EEF37206.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|414589256|tpg|DAA39827.1| TPA: hypothetical protein ZEAMMB73_861648 [Zea mays] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 239 | ||||||
| TAIR|locus:505006396 | 218 | AT3G52155 [Arabidopsis thalian | 0.732 | 0.802 | 0.708 | 1.4e-64 | |
| UNIPROTKB|Q602G7 | 166 | MCA3096 "Phosphoglycerate muta | 0.623 | 0.897 | 0.331 | 4.9e-14 | |
| TIGR_CMR|SPO_0523 | 169 | SPO_0523 "phosphoglycerate mut | 0.648 | 0.917 | 0.335 | 4.9e-14 | |
| TIGR_CMR|CJE_1082 | 170 | CJE_1082 "phosphohistidine pho | 0.502 | 0.705 | 0.286 | 4.7e-05 |
| TAIR|locus:505006396 AT3G52155 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 124/175 (70%), Positives = 143/175 (81%)
Query: 63 SVARRLILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVR 122
S++RRLILLRHA SSW+ SLRDHDRPLSK G+ DA KV+Q L LGW+PQLILSSDA R
Sbjct: 40 SISRRLILLRHAHSSWDDLSLRDHDRPLSKTGEADAAKVAQILSSLGWLPQLILSSDATR 99
Query: 123 TRQTLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGH 182
TR+TL+ MQ V GF+EA VHFI SFYS+AAMDGQTAEHLQ I KYS +I T+MCMGH
Sbjct: 100 TRETLKSMQAQVDGFMEANVHFIPSFYSIAAMDGQTAEHLQNIISKYSTPDISTIMCMGH 159
Query: 183 NRGWEEAASMFTGAFIELKTCNAALLETTGKSWEEAFTAAGLGGWKLQGIVTPTS 237
N+GWEEAASM +GA I+LKTCNAALL+ G SWEEAF +G GGWKL+G+V P S
Sbjct: 160 NKGWEEAASMLSGASIKLKTCNAALLQAFGNSWEEAFALSGPGGWKLEGLVAPDS 214
|
|
| UNIPROTKB|Q602G7 MCA3096 "Phosphoglycerate mutase family domain protein" [Methylococcus capsulatus str. Bath (taxid:243233)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|SPO_0523 SPO_0523 "phosphoglycerate mutase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CJE_1082 CJE_1082 "phosphohistidine phosphatase SixA" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 239 | |||
| COG2062 | 163 | COG2062, SixA, Phosphohistidine phosphatase SixA [ | 3e-27 | |
| cd07067 | 153 | cd07067, HP_PGM_like, Histidine phosphatase domain | 2e-16 | |
| cd07040 | 153 | cd07040, HP, Histidine phosphatase domain found in | 1e-13 | |
| pfam00300 | 154 | pfam00300, His_Phos_1, Histidine phosphatase super | 2e-12 | |
| smart00855 | 158 | smart00855, PGAM, Phosphoglycerate mutase family | 6e-10 | |
| TIGR00249 | 152 | TIGR00249, sixA, phosphohistidine phosphatase SixA | 8e-10 | |
| COG0406 | 208 | COG0406, phoE, Broad specificity phosphatase PhoE | 9e-06 | |
| PRK03482 | 215 | PRK03482, PRK03482, phosphoglycerate mutase; Provi | 4e-04 | |
| COG0588 | 230 | COG0588, GpmA, Phosphoglycerate mutase 1 [Carbohyd | 8e-04 | |
| PRK01112 | 228 | PRK01112, PRK01112, phosphoglyceromutase; Provisio | 0.002 |
| >gnl|CDD|224973 COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 3e-27
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 66 RRLILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQ 125
RL L+RH K+ W P + D DRPL++ G+ +A V+ L G P L+L S AVR RQ
Sbjct: 2 MRLYLMRHGKAEWAAPGIADFDRPLTERGRKEAELVAAWLAGQGVEPDLVLVSPAVRARQ 61
Query: 126 TLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRG 185
T EI+ +H + F + G ++L+ D + +V+ +GHN
Sbjct: 62 TAEIVAEH--LGEKKVEVFEELLPNGDP--GTVLDYLEAL-----GDGVGSVLLVGHNPL 112
Query: 186 WEEAASMFTGA---FIELKTCNAALLETTGKSWEEAFTAAGLGG 226
EE A + G ++ T A+LE ++ + G G
Sbjct: 113 LEELALLLAGGARLPVKFPTSGIAVLE-----FDGKWAPGGEGT 151
|
Length = 163 |
| >gnl|CDD|132718 cd07067, HP_PGM_like, Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
| >gnl|CDD|132716 cd07040, HP, Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
| >gnl|CDD|215845 pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1) | Back alignment and domain information |
|---|
| >gnl|CDD|214859 smart00855, PGAM, Phosphoglycerate mutase family | Back alignment and domain information |
|---|
| >gnl|CDD|129351 TIGR00249, sixA, phosphohistidine phosphatase SixA | Back alignment and domain information |
|---|
| >gnl|CDD|223483 COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|179583 PRK03482, PRK03482, phosphoglycerate mutase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223661 COG0588, GpmA, Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|234902 PRK01112, PRK01112, phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 239 | |||
| PRK14116 | 228 | gpmA phosphoglyceromutase; Provisional | 99.97 | |
| PRK14119 | 228 | gpmA phosphoglyceromutase; Provisional | 99.97 | |
| TIGR00249 | 152 | sixA phosphohistidine phosphatase SixA. | 99.97 | |
| PRK03482 | 215 | phosphoglycerate mutase; Provisional | 99.97 | |
| PRK13463 | 203 | phosphatase PhoE; Provisional | 99.97 | |
| PRK14117 | 230 | gpmA phosphoglyceromutase; Provisional | 99.97 | |
| PRK15004 | 199 | alpha-ribazole phosphatase; Provisional | 99.97 | |
| PRK14118 | 227 | gpmA phosphoglyceromutase; Provisional | 99.97 | |
| PRK13462 | 203 | acid phosphatase; Provisional | 99.97 | |
| PRK14120 | 249 | gpmA phosphoglyceromutase; Provisional | 99.97 | |
| PRK01112 | 228 | phosphoglyceromutase; Provisional | 99.97 | |
| PRK01295 | 206 | phosphoglyceromutase; Provisional | 99.97 | |
| PRK14115 | 247 | gpmA phosphoglyceromutase; Provisional | 99.97 | |
| TIGR03848 | 204 | MSMEG_4193 probable phosphomutase, MSMEG_4193 fami | 99.97 | |
| COG0406 | 208 | phoE Broad specificity phosphatase PhoE and relate | 99.96 | |
| PRK10848 | 159 | phosphohistidine phosphatase; Provisional | 99.96 | |
| COG2062 | 163 | SixA Phosphohistidine phosphatase SixA [Signal tra | 99.96 | |
| TIGR01258 | 245 | pgm_1 phosphoglycerate mutase, BPG-dependent, fami | 99.96 | |
| TIGR03162 | 177 | ribazole_cobC alpha-ribazole phosphatase. Members | 99.95 | |
| PRK07238 | 372 | bifunctional RNase H/acid phosphatase; Provisional | 99.95 | |
| cd07067 | 153 | HP_PGM_like Histidine phosphatase domain found in | 99.94 | |
| PTZ00122 | 299 | phosphoglycerate mutase; Provisional | 99.93 | |
| KOG0235 | 214 | consensus Phosphoglycerate mutase [Carbohydrate tr | 99.93 | |
| COG0588 | 230 | GpmA Phosphoglycerate mutase 1 [Carbohydrate trans | 99.92 | |
| smart00855 | 155 | PGAM Phosphoglycerate mutase family. Phosphoglycer | 99.92 | |
| PF00300 | 158 | His_Phos_1: Histidine phosphatase superfamily (bra | 99.91 | |
| cd07040 | 153 | HP Histidine phosphatase domain found in a functio | 99.91 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 99.9 | |
| PRK06193 | 206 | hypothetical protein; Provisional | 99.9 | |
| PTZ00123 | 236 | phosphoglycerate mutase like-protein; Provisional | 99.9 | |
| PRK15416 | 201 | lipopolysaccharide core heptose(II)-phosphate phos | 99.88 | |
| KOG4609 | 284 | consensus Predicted phosphoglycerate mutase [Gener | 99.79 | |
| KOG3734 | 272 | consensus Predicted phosphoglycerate mutase [Carbo | 99.58 | |
| KOG0234 | 438 | consensus Fructose-6-phosphate 2-kinase/fructose-2 | 99.58 | |
| KOG4754 | 248 | consensus Predicted phosphoglycerate mutase [Carbo | 99.55 | |
| cd07061 | 242 | HP_HAP_like Histidine phosphatase domain found in | 98.03 | |
| PF00328 | 347 | His_Phos_2: Histidine phosphatase superfamily (bra | 96.25 | |
| KOG3720 | 411 | consensus Lysosomal & prostatic acid phosphatases | 95.39 | |
| PRK10173 | 413 | glucose-1-phosphatase/inositol phosphatase; Provis | 94.91 | |
| PRK10172 | 436 | phosphoanhydride phosphorylase; Provisional | 94.55 | |
| KOG1057 | 1018 | consensus Arp2/3 complex-interacting protein VIP1/ | 94.03 | |
| KOG1382 | 467 | consensus Multiple inositol polyphosphate phosphat | 83.42 |
| >PRK14116 gpmA phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-31 Score=225.63 Aligned_cols=149 Identities=17% Similarity=0.222 Sum_probs=118.7
Q ss_pred ceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcC------
Q 026379 65 ARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQG------ 136 (239)
Q Consensus 65 ~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~------ 136 (239)
|++|||||||+|.+|..+ +|+.|.|||+.|++||+++++.|++.+++||.|||||+.||+|||++|++..+.
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~qTA~~i~~~~~~~~~~~~ 80 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFTGWVDVDLSEKGVEEAKKAGRLIKEAGLEFDQAYTSVLTRAIKTLHYALEESDQLWIPET 80 (228)
T ss_pred CCEEEEEeCCCCCCccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCcCCCCcc
Confidence 578999999999999876 689999999999999999999998755689999999999999999999765321
Q ss_pred ----CcceeEEEe------------cc-----------------------------cc----cccCCCCccHHHHHHHHH
Q 026379 137 ----FLEAEVHFI------------SS-----------------------------FY----SVAAMDGQTAEHLQKAIC 167 (239)
Q Consensus 137 ----~~~~~~~~~------------~~-----------------------------l~----~~~~p~GEs~~~l~~ri~ 167 (239)
+.|..+-.+ ++ .| ...+|+||+++++.+|+.
T Consensus 81 ~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgGEs~~~~~~Rv~ 160 (228)
T PRK14116 81 KTWRLNERHYGALQGLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDPRIIPGGENLKVTLERVI 160 (228)
T ss_pred cCcccccccchhhcCCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhccCccCCCCCCCHHHHHHHHH
Confidence 111100000 00 00 123589999999999987
Q ss_pred hhhc-------CCCCeEEEEeChHHHHHHHHHHhcC------CcccCCceEEEEEEeCC
Q 026379 168 KYSR-------DEILTVMCMGHNRGWEEAASMFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 168 ~~~~-------~~~~~vliVtH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
.+++ ..+++|||||||++|++++++++|. .+.+++|++++|+++.+
T Consensus 161 ~~l~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (228)
T PRK14116 161 PFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDIMNLEMATGEPVVYDFDEK 219 (228)
T ss_pred HHHHHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHHHhccCCCCCeEEEEECCC
Confidence 6431 2468999999999999999999997 36799999999999864
|
|
| >PRK14119 gpmA phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
| >TIGR00249 sixA phosphohistidine phosphatase SixA | Back alignment and domain information |
|---|
| >PRK03482 phosphoglycerate mutase; Provisional | Back alignment and domain information |
|---|
| >PRK13463 phosphatase PhoE; Provisional | Back alignment and domain information |
|---|
| >PRK14117 gpmA phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
| >PRK15004 alpha-ribazole phosphatase; Provisional | Back alignment and domain information |
|---|
| >PRK14118 gpmA phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
| >PRK13462 acid phosphatase; Provisional | Back alignment and domain information |
|---|
| >PRK14120 gpmA phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
| >PRK01112 phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
| >PRK01295 phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
| >PRK14115 gpmA phosphoglyceromutase; Provisional | Back alignment and domain information |
|---|
| >TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family | Back alignment and domain information |
|---|
| >COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] | Back alignment and domain information |
|---|
| >PRK10848 phosphohistidine phosphatase; Provisional | Back alignment and domain information |
|---|
| >COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1 | Back alignment and domain information |
|---|
| >TIGR03162 ribazole_cobC alpha-ribazole phosphatase | Back alignment and domain information |
|---|
| >PRK07238 bifunctional RNase H/acid phosphatase; Provisional | Back alignment and domain information |
|---|
| >cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
| >PTZ00122 phosphoglycerate mutase; Provisional | Back alignment and domain information |
|---|
| >KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >smart00855 PGAM Phosphoglycerate mutase family | Back alignment and domain information |
|---|
| >PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle | Back alignment and domain information |
|---|
| >cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
| >PRK06193 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PTZ00123 phosphoglycerate mutase like-protein; Provisional | Back alignment and domain information |
|---|
| >PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
| >KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction | Back alignment and domain information |
|---|
| >PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle | Back alignment and domain information |
|---|
| >KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional | Back alignment and domain information |
|---|
| >PRK10172 phosphoanhydride phosphorylase; Provisional | Back alignment and domain information |
|---|
| >KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 239 | ||||
| 2rfl_A | 173 | Crystal Structure Of The Putative Phosphohistidine | 2e-08 | ||
| 4hbz_A | 186 | The Structure Of Putative Phosphohistidine Phosphat | 2e-06 | ||
| 3f2i_A | 172 | Crystal Structure Of The Alr0221 Protein From Nosto | 1e-04 |
| >pdb|2RFL|A Chain A, Crystal Structure Of The Putative Phosphohistidine Phosphatase Sixa From Agrobacterium Tumefaciens Length = 173 | Back alignment and structure |
|
| >pdb|4HBZ|A Chain A, The Structure Of Putative Phosphohistidine Phosphatase Sixa From Nakamurella Multipartitia Length = 186 | Back alignment and structure |
| >pdb|3F2I|A Chain A, Crystal Structure Of The Alr0221 Protein From Nostoc, Northeast Structural Genomics Consortium Target Nsr422. Length = 172 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 239 | |||
| 2rfl_A | 173 | Putative phosphohistidine phosphatase SIXA; alpha- | 2e-45 | |
| 3f2i_A | 172 | ALR0221 protein; alpha-beta protein, structural ge | 5e-36 | |
| 1ujc_A | 161 | Phosphohistidine phosphatase SIXA; alpha-beta fold | 1e-28 | |
| 3mxo_A | 202 | Serine/threonine-protein phosphatase PGAM5, mitoc; | 7e-11 | |
| 3eoz_A | 214 | Putative phosphoglycerate mutase; PGAM, malaria, s | 3e-10 | |
| 2qni_A | 219 | AGR_C_517P, uncharacterized protein ATU0299; MCSG, | 1e-09 | |
| 2a6p_A | 208 | Possible phosphoglycerate mutase GPM2; predicted p | 6e-08 | |
| 1bif_A | 469 | 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; | 4e-07 | |
| 2axn_A | 520 | 6-phosphofructo-2-kinase/fructose-2,6- biphosphata | 5e-07 | |
| 1h2e_A | 207 | Phosphatase, YHFR; hydrolase, broad specificity ph | 1e-06 | |
| 3e9c_A | 265 | ZGC:56074; histidine phosphatase, hydrolase; 2.00A | 2e-06 | |
| 3c7t_A | 263 | Ecdysteroid-phosphate phosphatase; ecdysone, 2H-ph | 1e-05 | |
| 3dcy_A | 275 | Regulator protein; OMIM 610775, C12ORF5, tigar, TP | 3e-05 | |
| 3f3k_A | 265 | Uncharacterized protein YKR043C; structural genomi | 4e-05 | |
| 3d4i_A | 273 | STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domai | 5e-05 | |
| 3fjy_A | 364 | Probable MUTT1 protein; dimer, protein structure i | 8e-05 | |
| 3r7a_A | 237 | Phosphoglycerate mutase, putative; structural geno | 8e-05 | |
| 1v37_A | 177 | Phosphoglycerate mutase; riken structu genomics/pr | 1e-04 | |
| 3hjg_A | 213 | Putative alpha-ribazole-5'-phosphate phosphatase C | 2e-04 | |
| 3mbk_A | 264 | Ubiquitin-associated and SH3 domain-containing PR; | 2e-04 | |
| 1fzt_A | 211 | Phosphoglycerate mutase; open B-sheet-helices, iso | 7e-04 |
| >2rfl_A Putative phosphohistidine phosphatase SIXA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 2.35A {Agrobacterium tumefaciens str} Length = 173 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 2e-45
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 23/177 (12%)
Query: 66 RRLILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQ 125
R+ LLRHAK++W P RD DR L++AG +A ++ + P LILSS A R RQ
Sbjct: 9 TRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQ 68
Query: 126 TLEIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRG 185
T + Q+ ++ +I Y +E I E+ +VM +GHN
Sbjct: 69 TTQAWQRAFN--EGIDIVYIDEMY------NARSETYLSLIAAQ--TEVQSVMLVGHNPT 118
Query: 186 WEEAASMFTGAFIE-------LKTCNAALLETTGKSWEEAFTAAGLGGWKLQGIVTP 235
E G + T A+L+ + G W+L + P
Sbjct: 119 MEATLEAMIGEDLLHAALPSGFPTSGLAVLDQDDSAAS------GKNRWRLIDFLAP 169
|
| >3f2i_A ALR0221 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG, function; 2.00A {Nostoc SP} Length = 172 | Back alignment and structure |
|---|
| >1ujc_A Phosphohistidine phosphatase SIXA; alpha-beta fold, hydrolase; 1.90A {Escherichia coli} PDB: 1ujb_A Length = 161 | Back alignment and structure |
|---|
| >3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A Length = 202 | Back alignment and structure |
|---|
| >3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural genomics, isomerase, structural GE consortium, SGC; 2.40A {Plasmodium falciparum} Length = 214 | Back alignment and structure |
|---|
| >2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU proteolysis, structural genomics, PSI protein structure initiative; 1.80A {Agrobacterium tumefaciens str} Length = 219 | Back alignment and structure |
|---|
| >2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate mutase, structural genomics, PSI, structure initiative; 2.20A {Mycobacterium tuberculosis} Length = 208 | Back alignment and structure |
|---|
| >1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A Length = 469 | Back alignment and structure |
|---|
| >2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A* Length = 520 | Back alignment and structure |
|---|
| >1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM homolog; 1.69A {Bacillus stearothermophilus} SCOP: c.60.1.1 PDB: 1h2f_A* 1ebb_A Length = 207 | Back alignment and structure |
|---|
| >3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio} PDB: 3e9d_A 3e9e_A Length = 265 | Back alignment and structure |
|---|
| >3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM, hydrolase; 1.76A {Bombyx mori} Length = 263 | Back alignment and structure |
|---|
| >3dcy_A Regulator protein; OMIM 610775, C12ORF5, tigar, TP53-induced glycolysis and apoptosis regulator, CAsp target, structural genomics medical relevance; HET: MSE; 1.75A {Homo sapiens} Length = 275 | Back alignment and structure |
|---|
| >3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote structure initiative; 1.75A {Saccharomyces cerevisiae} PDB: 3lg2_A 3oi7_A* 3ll4_A* Length = 265 | Back alignment and structure |
|---|
| >3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase; 1.95A {Mus musculus} PDB: 3d6a_A 3db1_A Length = 273 | Back alignment and structure |
|---|
| >3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID} Length = 364 | Back alignment and structure |
|---|
| >3r7a_A Phosphoglycerate mutase, putative; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE EPE; 1.84A {Bacillus anthracis} Length = 237 | Back alignment and structure |
|---|
| >1v37_A Phosphoglycerate mutase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.40A {Thermus thermophilus} SCOP: c.60.1.1 PDB: 1v7q_A 2hia_A 2pa0_A 2p2y_A 2p77_A 2p6m_A 2p9y_A 2p30_A 2ekz_A 2p9f_A 2p79_A 2p78_A 2p2z_A 2p75_A 2owe_A 2enu_A 2ekb_A 2p6o_A 2owd_A 2enw_A ... Length = 177 | Back alignment and structure |
|---|
| >3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.80A {Vibrio parahaemolyticus} Length = 213 | Back alignment and structure |
|---|
| >3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1, signaling protein, low PH, alternative splicing, cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus} PDB: 2ikq_A 2h0q_A Length = 264 | Back alignment and structure |
|---|
| >1fzt_A Phosphoglycerate mutase; open B-sheet-helices, isomerase; NMR {Schizosaccharomyces pombe} SCOP: c.60.1.1 Length = 211 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 239 | |||
| 2rfl_A | 173 | Putative phosphohistidine phosphatase SIXA; alpha- | 100.0 | |
| 1ujc_A | 161 | Phosphohistidine phosphatase SIXA; alpha-beta fold | 100.0 | |
| 4emb_A | 274 | 2,3-bisphosphoglycerate-dependent phosphoglycerat; | 99.98 | |
| 3f2i_A | 172 | ALR0221 protein; alpha-beta protein, structural ge | 99.97 | |
| 1fzt_A | 211 | Phosphoglycerate mutase; open B-sheet-helices, iso | 99.97 | |
| 3kkk_A | 258 | Phosphoglycerate mutase; PGAM, glycolysis, malaria | 99.97 | |
| 1qhf_A | 240 | Protein (phosphoglycerate mutase); transferase (ph | 99.97 | |
| 1h2e_A | 207 | Phosphatase, YHFR; hydrolase, broad specificity ph | 99.97 | |
| 3hjg_A | 213 | Putative alpha-ribazole-5'-phosphate phosphatase C | 99.97 | |
| 3d8h_A | 267 | Glycolytic phosphoglycerate mutase; structural gen | 99.97 | |
| 1yfk_A | 262 | Phosphoglycerate mutase 1; alpha/beta, isomerase, | 99.97 | |
| 3gp3_A | 257 | 2,3-bisphosphoglycerate-dependent phosphoglycerat; | 99.97 | |
| 4eo9_A | 268 | 2,3-bisphosphoglycerate-dependent phosphoglycerat; | 99.97 | |
| 3r7a_A | 237 | Phosphoglycerate mutase, putative; structural geno | 99.97 | |
| 2hhj_A | 267 | Bisphosphoglycerate mutase; isomerase; HET: NEP DG | 99.97 | |
| 3eoz_A | 214 | Putative phosphoglycerate mutase; PGAM, malaria, s | 99.97 | |
| 1e58_A | 249 | Phosphoglycerate mutase; phosphohistidine, glycoly | 99.97 | |
| 4hbz_A | 186 | Putative phosphohistidine phosphatase, SIXA; struc | 99.97 | |
| 1rii_A | 265 | 2,3-bisphosphoglycerate-dependent phosphoglycerat; | 99.97 | |
| 3mxo_A | 202 | Serine/threonine-protein phosphatase PGAM5, mitoc; | 99.97 | |
| 2a6p_A | 208 | Possible phosphoglycerate mutase GPM2; predicted p | 99.97 | |
| 2qni_A | 219 | AGR_C_517P, uncharacterized protein ATU0299; MCSG, | 99.97 | |
| 3c7t_A | 263 | Ecdysteroid-phosphate phosphatase; ecdysone, 2H-ph | 99.97 | |
| 3d4i_A | 273 | STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domai | 99.96 | |
| 3f3k_A | 265 | Uncharacterized protein YKR043C; structural genomi | 99.96 | |
| 1v37_A | 177 | Phosphoglycerate mutase; riken structu genomics/pr | 99.95 | |
| 3e9c_A | 265 | ZGC:56074; histidine phosphatase, hydrolase; 2.00A | 99.95 | |
| 3mbk_A | 264 | Ubiquitin-associated and SH3 domain-containing PR; | 99.95 | |
| 3dcy_A | 275 | Regulator protein; OMIM 610775, C12ORF5, tigar, TP | 99.93 | |
| 1bif_A | 469 | 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; | 99.92 | |
| 3fjy_A | 364 | Probable MUTT1 protein; dimer, protein structure i | 99.92 | |
| 2axn_A | 520 | 6-phosphofructo-2-kinase/fructose-2,6- biphosphata | 99.92 | |
| 1nd6_A | 354 | Prostatic acid phosphatase; PAP, prostate, phospha | 96.57 | |
| 3ntl_A | 398 | Acid glucose-1-phosphate phosphatase; histidine ac | 95.99 | |
| 3it3_A | 342 | Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A | 95.95 | |
| 1dkq_A | 410 | Phytase; histidine acid phosphatase fold, hydrolas | 95.69 | |
| 2wnh_A | 418 | 3-phytase; histidine acid phosphatase, hydrolase; | 94.93 | |
| 3k4q_A | 444 | 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hex | 92.27 | |
| 1qwo_A | 442 | Phytase; alpha barrel, beta sandwich, orthogonal b | 90.35 | |
| 1qfx_A | 460 | Protein (PH 2.5 acid phosphatase); phosphomonoeste | 83.37 | |
| 2gfi_A | 458 | Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces | 80.36 |
| >2rfl_A Putative phosphohistidine phosphatase SIXA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 2.35A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=233.58 Aligned_cols=163 Identities=29% Similarity=0.421 Sum_probs=122.3
Q ss_pred CCccCceEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCcc
Q 026379 60 EDQSVARRLILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLE 139 (239)
Q Consensus 60 ~~~~~~~~l~LvRHGet~~n~~~~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~ 139 (239)
|+..+|++|||||||+++||..++++.|+|||++|++||++++++|+..++.+|.|||||+.||+|||+++++.++ ++
T Consensus 3 m~~~~M~~l~LvRHg~t~~n~~~~g~~d~pLt~~G~~qa~~l~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~-~~- 80 (173)
T 2rfl_A 3 MTASFPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFN-EG- 80 (173)
T ss_dssp ---CCCCEEEEEECCCBCC-----CGGGCCBCHHHHHHHHHHHHHHHHHTCCCSEEEECSSHHHHHHHHHHHHHHC----
T ss_pred CccccccEEEEEeCCCcCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCHHHHHHHHHHHHHhcC-CC-
Confidence 3445678999999999999987788999999999999999999999976678999999999999999999998875 21
Q ss_pred eeEEEecccccccCCCCccHHHHHHHHHhhhcCCCCeEEEEeChHHHHHHHHHHhcC-------CcccCCceEEEEEEeC
Q 026379 140 AEVHFISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRGWEEAASMFTGA-------FIELKTCNAALLETTG 212 (239)
Q Consensus 140 ~~~~~~~~l~~~~~p~GEs~~~l~~ri~~~~~~~~~~vliVtH~~~i~~l~~~l~g~-------~~~~~~~si~~l~~~~ 212 (239)
.++.+++++++.. .|++.+++ +. ....++|||||||++|+.++.++++. .+.+++|++++|++++
T Consensus 81 ~~~~~~~~l~e~~---~e~~~~~l----~~-~~~~~~vlvVsH~~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~ 152 (173)
T 2rfl_A 81 IDIVYIDEMYNAR---SETYLSLI----AA-QTEVQSVMLVGHNPTMEATLEAMIGEDLLHAALPSGFPTSGLAVLDQDD 152 (173)
T ss_dssp CEEEECGGGSSCS---SSCSHHHH----HT-CTTCSEEEEEECTTHHHHHHHHHHCHHHHHHHCTTCCCTTCEEEEEC--
T ss_pred CCeEECHhHhcCC---HHHHHHHH----hC-CCCCCeEEEEeCCHHHHHHHHHHhCCCcchhhhhcCCCCCeEEEEEecC
Confidence 2356778888753 45655544 22 24567999999999999999999875 2578999999999986
Q ss_pred CcchhhhhccCCCceEEEEeecCCCC
Q 026379 213 KSWEEAFTAAGLGGWKLQGIVTPTSC 238 (239)
Q Consensus 213 ~~W~~~~~~~~~g~~~L~~~~~P~~~ 238 (239)
+ .++. .|.|+|.|++.|+.+
T Consensus 153 ~--~~~~----~~~~~l~~~~~P~~l 172 (173)
T 2rfl_A 153 S--AASG----KNRWRLIDFLAPGKG 172 (173)
T ss_dssp ------------CCCEEEEEECC---
T ss_pred h--hccc----CCceEEEEEecCCCC
Confidence 4 4442 378999999999876
|
| >1ujc_A Phosphohistidine phosphatase SIXA; alpha-beta fold, hydrolase; 1.90A {Escherichia coli} PDB: 1ujb_A | Back alignment and structure |
|---|
| >4emb_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.30A {Borrelia burgdorferi} | Back alignment and structure |
|---|
| >3f2i_A ALR0221 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG, function; 2.00A {Nostoc SP} | Back alignment and structure |
|---|
| >1fzt_A Phosphoglycerate mutase; open B-sheet-helices, isomerase; NMR {Schizosaccharomyces pombe} SCOP: c.60.1.1 | Back alignment and structure |
|---|
| >3kkk_A Phosphoglycerate mutase; PGAM, glycolysis, malaria, structural genomics, medical STRU genomics of pathogenic protozoa, MSGPP; 2.08A {Plasmodium falciparum 3D7} PDB: 1xq9_A | Back alignment and structure |
|---|
| >1qhf_A Protein (phosphoglycerate mutase); transferase (phosphoryl); HET: 3PG; 1.70A {Saccharomyces cerevisiae} SCOP: c.60.1.1 PDB: 5pgm_D 1bq3_D* 1bq4_D 4pgm_A 3pgm_A* | Back alignment and structure |
|---|
| >1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM homolog; 1.69A {Bacillus stearothermophilus} SCOP: c.60.1.1 PDB: 1h2f_A* 1ebb_A | Back alignment and structure |
|---|
| >3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.80A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
| >3d8h_A Glycolytic phosphoglycerate mutase; structural genomics, malaria, glycolysis, I structural genomics consortium, SGC; 2.01A {Cryptosporidium parvum} | Back alignment and structure |
|---|
| >1yfk_A Phosphoglycerate mutase 1; alpha/beta, isomerase, hydrolase; HET: CIT; 2.70A {Homo sapiens} PDB: 1yjx_A* | Back alignment and structure |
|---|
| >3gp3_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyceromutase, decode, SBRI, niaid, UWPPG, glycolysis isomerase; HET: PG4 SEP; 1.50A {Burkholderia pseudomallei} SCOP: c.60.1.1 PDB: 3fdz_A* 3ezn_A* 3gp5_A* 3gw8_A* 3lnt_A | Back alignment and structure |
|---|
| >4eo9_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.45A {Mycobacterium leprae} | Back alignment and structure |
|---|
| >3r7a_A Phosphoglycerate mutase, putative; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE EPE; 1.84A {Bacillus anthracis} | Back alignment and structure |
|---|
| >2hhj_A Bisphosphoglycerate mutase; isomerase; HET: NEP DG2 3PG; 1.50A {Homo sapiens} SCOP: c.60.1.1 PDB: 1t8p_A* 2f90_A* 2a9j_A* 2h4z_A* 2h52_A* 2h4x_A* 3nfy_A | Back alignment and structure |
|---|
| >3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural genomics, isomerase, structural GE consortium, SGC; 2.40A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >1e58_A Phosphoglycerate mutase; phosphohistidine, glycolysis and gluconeogenesis, isomerase; HET: NEP; 1.25A {Escherichia coli} SCOP: c.60.1.1 PDB: 1e59_A* | Back alignment and structure |
|---|
| >4hbz_A Putative phosphohistidine phosphatase, SIXA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, HP_PGM_LIKE; HET: PGE; 1.55A {Nakamurella multipartita} | Back alignment and structure |
|---|
| >1rii_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyerate mutase, SH3 domain binding, structural genom TBSGC; 1.70A {Mycobacterium tuberculosis} SCOP: c.60.1.1 | Back alignment and structure |
|---|
| >3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A | Back alignment and structure |
|---|
| >2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate mutase, structural genomics, PSI, structure initiative; 2.20A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU proteolysis, structural genomics, PSI protein structure initiative; 1.80A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
| >3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM, hydrolase; 1.76A {Bombyx mori} | Back alignment and structure |
|---|
| >3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase; 1.95A {Mus musculus} PDB: 3d6a_A 3db1_A | Back alignment and structure |
|---|
| >3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote structure initiative; 1.75A {Saccharomyces cerevisiae} PDB: 3lg2_A 3oi7_A* 3ll4_A* | Back alignment and structure |
|---|
| >1v37_A Phosphoglycerate mutase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.40A {Thermus thermophilus} SCOP: c.60.1.1 PDB: 1v7q_A 2hia_A 2pa0_A 2p2y_A 2p77_A 2p6m_A 2p9y_A 2p30_A 2ekz_A 2p9f_A 2p79_A 2p78_A 2p2z_A 2p75_A 2owe_A 2enu_A 2ekb_A 2p6o_A 2owd_A 2enw_A ... | Back alignment and structure |
|---|
| >3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio} PDB: 3e9d_A 3e9e_A | Back alignment and structure |
|---|
| >3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1, signaling protein, low PH, alternative splicing, cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus} PDB: 2ikq_A 2h0q_A | Back alignment and structure |
|---|
| >3dcy_A Regulator protein; OMIM 610775, C12ORF5, tigar, TP53-induced glycolysis and apoptosis regulator, CAsp target, structural genomics medical relevance; HET: MSE; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
| >1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A | Back alignment and structure |
|---|
| >3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID} | Back alignment and structure |
|---|
| >2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A* | Back alignment and structure |
|---|
| >1nd6_A Prostatic acid phosphatase; PAP, prostate, phosphate, inhibi hydrolase; HET: NAG MAN 1PE; 2.40A {Homo sapiens} SCOP: c.60.1.2 PDB: 1nd5_A* 2hpa_A* 1cvi_A* 1rpa_A* 1rpt_A* 2l3h_A 2l77_A 2l79_A | Back alignment and structure |
|---|
| >3ntl_A Acid glucose-1-phosphate phosphatase; histidine acid phosphatase, phytate binding site, hydrolase; HET: IHP; 1.88A {Enterobacter cloacae} PDB: 1nt4_A* | Back alignment and structure |
|---|
| >3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella tularensis subsp} PDB: 4e3w_A 2glc_A 2glb_A 2gla_A 3it0_A* 3it1_A* 3it2_A 2p36_A* | Back alignment and structure |
|---|
| >1dkq_A Phytase; histidine acid phosphatase fold, hydrolase; HET: IHP; 2.05A {Escherichia coli} SCOP: c.60.1.2 PDB: 1dkp_A* 1dkm_A 1dkn_A 1dko_A 1dkl_A | Back alignment and structure |
|---|
| >2wnh_A 3-phytase; histidine acid phosphatase, hydrolase; 1.68A {Klebsiella pneumoniae} PDB: 2wni_A 2wu0_A | Back alignment and structure |
|---|
| >3k4q_A 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hexakis phosphate phosphohydrolase, 37288-11-2, MYO-inositol hexakis sulfate, 62-1; HET: IHS NAG; 2.20A {Aspergillus niger} SCOP: c.60.1.2 PDB: 3k4p_A* 1ihp_A | Back alignment and structure |
|---|
| >1qwo_A Phytase; alpha barrel, beta sandwich, orthogonal bundle, glycoprotein phosphohistidine, hydrolase; HET: NEP NAG; 1.50A {Aspergillus fumigatus} SCOP: c.60.1.2 PDB: 1skb_A* 1sk8_A* 1ska_A* 1sk9_A* | Back alignment and structure |
|---|
| >1qfx_A Protein (PH 2.5 acid phosphatase); phosphomonoesterase, hydrolase; HET: NAG BMA MAN; 2.40A {Aspergillus niger} SCOP: c.60.1.2 | Back alignment and structure |
|---|
| >2gfi_A Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces castellii} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 239 | ||||
| d1bifa2 | 219 | c.60.1.4 (A:250-468) 6-phosphofructo-2-kinase/fruc | 3e-05 | |
| d1qhfa_ | 240 | c.60.1.1 (A:) Phosphoglycerate mutase {Baker's yea | 4e-05 | |
| d1riia_ | 243 | c.60.1.1 (A:) Phosphoglycerate mutase {Mycobacteri | 7e-05 | |
| d1e58a_ | 247 | c.60.1.1 (A:) Phosphoglycerate mutase {Escherichia | 2e-04 | |
| d2hhja1 | 248 | c.60.1.1 (A:3-250) Phosphoglycerate mutase {Human | 3e-04 | |
| d1fzta_ | 211 | c.60.1.1 (A:) Phosphoglycerate mutase {Fission yea | 6e-04 | |
| d1xq9a_ | 241 | c.60.1.1 (A:) Phosphoglycerate mutase {Plasmodium | 0.001 |
| >d1bifa2 c.60.1.4 (A:250-468) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 219 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain domain: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 41.4 bits (96), Expect = 3e-05
Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 4/141 (2%)
Query: 68 LILLRHAKSSWEFPSLRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTL 127
+ L RH +S D LS G++ + ++Q + + +S RT QT
Sbjct: 2 IYLCRHGESELNLKGRIGGDPGLSPRGREFSKHLAQFISDQNIKDLKVFTSQMKRTIQTA 61
Query: 128 EIMQQHVQGFLEAEVHFISSFYSVAAMDGQTAEHLQKAICKYSRDEILTVMCMGHNRGWE 187
E + + F + + Q L+ A+ + +E
Sbjct: 62 EALSVPYEQFKVLNEIDAGVCEEMTYEEIQDHYPLEFALRDQDKYR----YRYPKGESYE 117
Query: 188 EAASMFTGAFIELKTCNAALL 208
+ +EL+ L+
Sbjct: 118 DLVQRLEPVIMELERQENVLV 138
|
| >d1qhfa_ c.60.1.1 (A:) Phosphoglycerate mutase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 240 | Back information, alignment and structure |
|---|
| >d1riia_ c.60.1.1 (A:) Phosphoglycerate mutase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 243 | Back information, alignment and structure |
|---|
| >d1e58a_ c.60.1.1 (A:) Phosphoglycerate mutase {Escherichia coli [TaxId: 562]} Length = 247 | Back information, alignment and structure |
|---|
| >d2hhja1 c.60.1.1 (A:3-250) Phosphoglycerate mutase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
| >d1fzta_ c.60.1.1 (A:) Phosphoglycerate mutase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 211 | Back information, alignment and structure |
|---|
| >d1xq9a_ c.60.1.1 (A:) Phosphoglycerate mutase {Plasmodium falciparum [TaxId: 5833]} Length = 241 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 239 | |||
| d1e58a_ | 247 | Phosphoglycerate mutase {Escherichia coli [TaxId: | 100.0 | |
| d1h2ea_ | 207 | Broad specificity phosphatase PhoE (YhfR) {Bacillu | 99.97 | |
| d1fzta_ | 211 | Phosphoglycerate mutase {Fission yeast (Schizosacc | 99.97 | |
| d2hhja1 | 248 | Phosphoglycerate mutase {Human (Homo sapiens) [Tax | 99.97 | |
| d1riia_ | 243 | Phosphoglycerate mutase {Mycobacterium tuberculosi | 99.97 | |
| d1xq9a_ | 241 | Phosphoglycerate mutase {Plasmodium falciparum [Ta | 99.96 | |
| d1qhfa_ | 240 | Phosphoglycerate mutase {Baker's yeast (Saccharomy | 99.96 | |
| d1bifa2 | 219 | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata | 99.96 | |
| d1v37a_ | 171 | Alpha-ribazole-5'-phosphate phosphatase {Thermus t | 99.95 | |
| d1nd6a_ | 342 | Prostatic acid phosphatase {Human (Homo sapiens) [ | 96.99 | |
| d1dkla_ | 409 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 96.76 | |
| d1nt4a_ | 391 | Glucose-1-phosphatase {Escherichia coli [TaxId: 56 | 96.61 | |
| d1qwoa_ | 435 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 96.48 | |
| d1ihpa_ | 438 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 96.35 | |
| d1qfxa_ | 447 | Phytase (myo-inositol-hexakisphosphate-3-phosphohy | 95.54 |
| >d1e58a_ c.60.1.1 (A:) Phosphoglycerate mutase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphoglycerate mutase-like superfamily: Phosphoglycerate mutase-like family: Cofactor-dependent phosphoglycerate mutase domain: Phosphoglycerate mutase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-32 Score=234.69 Aligned_cols=149 Identities=15% Similarity=0.126 Sum_probs=121.2
Q ss_pred CceEEEEEcCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEccHHHHHHHHHHHHHhhcCCccee
Q 026379 64 VARRLILLRHAKSSWEFPS--LRDHDRPLSKAGQDDAIKVSQRLQQLGWIPQLILSSDAVRTRQTLEIMQQHVQGFLEAE 141 (239)
Q Consensus 64 ~~~~l~LvRHGet~~n~~~--~g~~D~pLt~~G~~qA~~la~~L~~~~~~~d~i~sSpl~Ra~qTA~~l~~~~~~~~~~~ 141 (239)
.|++|||||||||.||..+ +|+.|.|||+.|++||+.+|++|++.+++||.|||||+.||+|||+++....+. ...+
T Consensus 1 ~mtrl~LvRHGeT~~N~~~~~~G~~D~pLTe~G~~QA~~~~~~L~~~~~~~d~i~sS~L~Ra~~Ta~~i~~~~~~-~~~~ 79 (247)
T d1e58a_ 1 AVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQ-AWLP 79 (247)
T ss_dssp CCEEEEEEECCCBHHHHTTBCCTTCCCCBCHHHHHHHHHHHHHHHHTTCCCSEEEECSSHHHHHHHHHHHHHHTC-TTSC
T ss_pred CceEEEEEECCCChhhhcCceeCCCCCCcCHHHHHHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHhhccc-ccCc
Confidence 3689999999999999877 688999999999999999999999888999999999999999999999776542 1112
Q ss_pred EEEecccc--------------------------------------------------------cccCCCCccHHHHHHH
Q 026379 142 VHFISSFY--------------------------------------------------------SVAAMDGQTAEHLQKA 165 (239)
Q Consensus 142 ~~~~~~l~--------------------------------------------------------~~~~p~GEs~~~l~~r 165 (239)
+..+++|. ....|+||++.++.+|
T Consensus 80 i~~~~~L~E~~~G~~eG~~~~ei~~~~~~e~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~gEs~~~~~~R 159 (247)
T d1e58a_ 80 VEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDR 159 (247)
T ss_dssp EEECGGGCCCCCGGGTTCBHHHHHHHHCHHHHHHHHHCTTCCCCCCCTTSTTCGGGSGGGTTCCTTTSCSCCCHHHHHHH
T ss_pred hheecchhhccccccCCCcHHHHHHHhHHHHHHHHhccccCCCccccccchhhhhhhhhhcccccccCCcchhHHHHHHH
Confidence 22211110 1123679999999999
Q ss_pred HHhhhc-------CCCCeEEEEeChHHHHHHHHHHhcC------CcccCCceEEEEEEeCC
Q 026379 166 ICKYSR-------DEILTVMCMGHNRGWEEAASMFTGA------FIELKTCNAALLETTGK 213 (239)
Q Consensus 166 i~~~~~-------~~~~~vliVtH~~~i~~l~~~l~g~------~~~~~~~si~~l~~~~~ 213 (239)
+..++. ..+++|||||||++|+.++.++++. .+.+|||++++++++.+
T Consensus 160 v~~~~~~~i~~~~~~~~~ilvVtHg~~ir~ll~~~l~~~~~~~~~l~i~n~s~~i~~~~~~ 220 (247)
T d1e58a_ 160 VIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDEN 220 (247)
T ss_dssp HHHHHHHTHHHHHHTTCCEEEEECHHHHHHHHHHHTTCCHHHHHHCCCCTTCCEEEEECTT
T ss_pred HHhhhhhhhhHhhcCCCCEEEECcHHHHHHHHHHHcCCCHHHHhhccCCCCeEEEEEECCC
Confidence 875321 4568999999999999999999997 36899999999999853
|
| >d1h2ea_ c.60.1.1 (A:) Broad specificity phosphatase PhoE (YhfR) {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1fzta_ c.60.1.1 (A:) Phosphoglycerate mutase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d2hhja1 c.60.1.1 (A:3-250) Phosphoglycerate mutase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1riia_ c.60.1.1 (A:) Phosphoglycerate mutase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1xq9a_ c.60.1.1 (A:) Phosphoglycerate mutase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1qhfa_ c.60.1.1 (A:) Phosphoglycerate mutase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1bifa2 c.60.1.4 (A:250-468) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1v37a_ c.60.1.1 (A:) Alpha-ribazole-5'-phosphate phosphatase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1nd6a_ c.60.1.2 (A:) Prostatic acid phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1dkla_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qwoa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus fumigatus [TaxId: 5085]} | Back information, alignment and structure |
|---|
| >d1ihpa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus ficuum [TaxId: 5058]} | Back information, alignment and structure |
|---|
| >d1qfxa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|