Citrus Sinensis ID: 026393

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGESTEPKEGVVDTPAESKGVVDTPAETKEVDIAKPAEYGPSETAAAGPEATPSSDDTKKE
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHEEEEEcccccccccccHHHHHcccccccccccccccHHHHHccccccccccEEEEEccEEEEEcccccccccccccccHHHcHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHcccccccccEEEEEEEEEEEEccccccccccccHHHHcccHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSgmfgssdnhhqqRSREyeeqmeplpppvqlgeiteeelkqydgsdskkPLLMAIKSQIYDvsqsrmfygpggpyalfaGKDASRALAKMSFEekdltgdisglgpfeLEALQDWEYKFMSKYVKVgsikstvpvtdgassgestepkegvvdtpaeskgvvdtpaetkevdiakpaeygpsetaaagpeatpssddtkke
Flexible Loop (DISEMBL)
MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKStvpvtdgassgestepkegvvdtpaeskgvvdtpaetkevdiakpaeygpsetaaagpeatpssddtkke
Low Complexity Region (SEG)
MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGESTEPKEGVVDTPAESKGVVDTPAETKEVDIAKPAEYGPSETAAAGPEATPSSDDTKKE
Disordered region (IsUnstruct)
***QLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMF**********************************************LLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKS**********************************************************************
Disordered Region (DISOPRED)
******ETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQ**REY*EQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSG***********************************************************
Disordered Region (DISEMBL)
MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGS******************LPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTV************************SKGVVDTPAETKEVDIAKPAEYGPS*******************
Disordered Region (DISPRO)
MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGS******************LPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVT***S***STEPKEGVVDTPAES*******************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGESTEPKEGVVDTPAESKGVVDTPAETKEVDIAKPAEYGPSETAAAGPEATPSSDDTKKE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	239	2.2.26 [Sep-21-2011]
Q9M2Z4	233	Membrane steroid-binding	yes	no	0.757	0.776	0.775	2e-75
Q9XFM6	220	Membrane steroid-binding	no	no	0.853	0.927	0.680	3e-72
Q9SK39	100	Probable steroid-binding	no	no	0.414	0.99	0.505	1e-22
Q6IUR5	171	Neudesin OS=Rattus norveg	yes	no	0.472	0.660	0.456	7e-19
Q95250	194	Membrane-associated proge	yes	no	0.443	0.546	0.423	6e-18
Q9CQ45	171	Neudesin OS=Mus musculus	yes	no	0.472	0.660	0.439	7e-18
Q17QC0	194	Membrane-associated proge	yes	no	0.443	0.546	0.423	8e-18
O55022	195	Membrane-associated proge	no	no	0.443	0.543	0.423	1e-17
P70580	195	Membrane-associated proge	no	no	0.401	0.492	0.44	2e-17
Q1JQA5	169	Neudesin OS=Bos taurus GN	no	no	0.472	0.668	0.413	2e-17

>sp|Q9M2Z4|MSBP2_ARATH Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1

 Score =  281 bits (720), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 145/187 (77%), Positives = 158/187 (84%), Gaps = 6/187 (3%)

Query: 1   MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQM 60
           M  Q+WETLKE ITAYTGLSPAAFFTV+AL +A+Y V+SG F S + H + RS E + Q 
Sbjct: 1   MVQQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVH-RPRSLEVQPQS 59

Query: 61  EPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKD 120
           EPLPPPVQLGEITEEELK YDGSDSKKPLLMAIK QIYDVSQSRMFYGPGGPYALFAGKD
Sbjct: 60  EPLPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKD 119

Query: 121 ASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSG 180
           ASRALAKMSFE++DLTGDISGLG FELEALQDWEYKFMSKYVKVG+I+      DG    
Sbjct: 120 ASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTIQK----KDGEGK- 174

Query: 181 ESTEPKE 187
           ES+EP E
Sbjct: 175 ESSEPSE 181

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XFM6|MSBP1_ARATH Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2

 Score =  271 bits (693), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 147/216 (68%), Positives = 165/216 (76%), Gaps = 12/216 (5%)

Query: 1   MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGS--SDNHHQQRSREYEE 58
           MAL+LW+TLKEAI AYTGLSP  FFT +AL +AIY V+SG F S   D +  QR+R   +
Sbjct: 1   MALELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQ 60

Query: 59  QMEP-LPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFA 117
           + EP +P PVQ+GEITEEELKQYDGSD +KPLLMAIK QIYDV+QSRMFYGPGGPYALFA
Sbjct: 61  EEEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFA 120

Query: 118 GKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGA 177
           GKDASRALAKMSFEEKDLT D+SGLGPFEL+ALQDWEYKFMSKY KVG++K      + A
Sbjct: 121 GKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTVKVAGSEPETA 180

Query: 178 SSGESTEPKE---GVVDTPAESKGVV----DTPAET 206
           S  E TE  E    V  TP   K VV    D PAET
Sbjct: 181 SVSEPTENVEQDAHVTTTPG--KTVVDKSDDAPAET 214

MSBP1 can bind to multiple steroid compounds with different affinities. Negatively regulates cell elongation and brassinosteroid signaling. May act as a coreceptor with BAK1 and enhances its endocytosis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SK39|SBP3_ARATH Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1

 Score =  107 bits (266), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/99 (50%), Positives = 69/99 (69%)

Query: 71  EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF 130
           E T E+L QY+G+D  KP+ +AIK +++DV+  + FYG GG Y++FAGKDASRAL KMS 
Sbjct: 2   EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 61

Query: 131 EEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKS 169
            E+D++  + GL   E+  L DWE KF +KY  VG + S
Sbjct: 62  NEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 100

Arabidopsis thaliana (taxid: 3702)

>sp|Q6IUR5|NENF_RAT Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1

 Score = 94.4 bits (233), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 3/116 (2%)

Query: 65  PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRA 124
           PPV+L   TEEEL +Y G +  +P+ +A+K  ++DV+  + FYG G PY   AGKD+SR 
Sbjct: 41  PPVRL--FTEEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRG 98

Query: 125 LAKMSFEEKDLTGDISGLGPFELEALQDWEYK-FMSKYVKVGSIKSTVPVTDGASS 179
           +AKMS +  DLT DISGL   ELEAL D   K + +KY  VG     +   DG+ +
Sbjct: 99  VAKMSLDPADLTHDISGLTAKELEALDDIFSKVYKAKYPIVGYTARRILNEDGSPN 154

Displays neurotrophic activity and activates phosphorylation of MAPK1/ERK2, MAPK3/ERK1 and AKT1/AKT in primary cultured neurons. Does not have mitogenic activity in primary cultured astrocytes. May play a role on neuronal differentiation and may have a transient effect on neural cell proliferation in neural precursor cells. Neurotrophic activity is enhanced by binding to heme.

Rattus norvegicus (taxid: 10116)

>sp|Q95250|PGRC1_PIG Membrane-associated progesterone receptor component 1 OS=Sus scrofa GN=PGRMC1 PE=1 SV=3

 Score = 90.9 bits (224), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 69/111 (62%), Gaps = 5/111 (4%)

Query: 61  EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGK 119
           EP P P ++  + T  EL+++DG    + +LMAI  +++DV++ R FYGP GPY +FAG+
Sbjct: 60  EPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGR 118

Query: 120 DASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 167
           DASR LA    ++   KD   D+S L P + E L DW+ +F  KY  VG +
Sbjct: 119 DASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKL 169

Receptor for progesterone.

Sus scrofa (taxid: 9823)

>sp|Q9CQ45|NENF_MOUSE Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1

 Score = 90.9 bits (224), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 3/116 (2%)

Query: 65  PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRA 124
           PPV+L   TEEEL +Y G +  +P+ +A+K  ++DV+  + FYG G PY   AGKD+SR 
Sbjct: 41  PPVRL--FTEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRG 98

Query: 125 LAKMSFEEKDLTGDISGLGPFELEALQDWEYK-FMSKYVKVGSIKSTVPVTDGASS 179
           +AKMS +  DLT D +GL   ELEAL D   K + +KY  VG     +   DG+ +
Sbjct: 99  VAKMSLDPADLTHDTTGLTAKELEALDDVFSKVYKAKYPIVGYTARRILNEDGSPN 154

Displays neurotrophic activity and activates phosphorylation of MAPK1/ERK2, MAPK3/ERK1 and AKT1/AKT in primary cultured neurons. Does not have mitogenic activity in primary cultured astrocytes. May play a role on neuronal differentiation and may have a transient effect on neural cell proliferation in neural precursor cells. Neurotrophic activity is enhanced by binding to heme.

Mus musculus (taxid: 10090)

>sp|Q17QC0|PGRC1_BOVIN Membrane-associated progesterone receptor component 1 OS=Bos taurus GN=PGRMC1 PE=2 SV=3

 Score = 90.9 bits (224), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 69/111 (62%), Gaps = 5/111 (4%)

Query: 61  EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGK 119
           EP P P ++  + T  EL+++DG    + +LMAI  +++DV++ R FYGP GPY +FAG+
Sbjct: 60  EPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGR 118

Query: 120 DASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 167
           DASR LA    ++   KD   D+S L P + E L DW+ +F  KY  VG +
Sbjct: 119 DASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKL 169

Receptor for progesterone.

Bos taurus (taxid: 9913)

>sp|O55022|PGRC1_MOUSE Membrane-associated progesterone receptor component 1 OS=Mus musculus GN=Pgrmc1 PE=1 SV=4

 Score = 90.5 bits (223), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 69/111 (62%), Gaps = 5/111 (4%)

Query: 61  EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGK 119
           EP P P ++  + T  EL+++DG    + +LMAI  +++DV++ R FYGP GPY +FAG+
Sbjct: 61  EPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGR 119

Query: 120 DASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 167
           DASR LA    ++   KD   D+S L P + E L DW+ +F  KY  VG +
Sbjct: 120 DASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKL 170

Receptor for progesterone.

Mus musculus (taxid: 10090)

>sp|P70580|PGRC1_RAT Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus GN=Pgrmc1 PE=1 SV=3

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 4/100 (4%)

Query: 71  EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF 130
           + T  EL++YDG    + +LMAI  +++DV++ R FYGP GPY +FAG+DASR LA    
Sbjct: 72  DFTPAELRRYDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCL 130

Query: 131 EE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 167
           ++   KD   D+S L P + E L DW+ +F  KY  VG +
Sbjct: 131 DKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKL 170

Receptor for progesterone (By similarity). May be implicated in 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) immunotoxicity.

Rattus norvegicus (taxid: 10116)

>sp|Q1JQA5|NENF_BOVIN Neudesin OS=Bos taurus GN=NENF PE=2 SV=1

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 3/116 (2%)

Query: 65  PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRA 124
           PPV+L   TEEEL +Y G +  +P+ MA+K  ++DV+  + FYG G PY    GKD++R 
Sbjct: 39  PPVRL--FTEEELARYGGEEEDQPIYMAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRG 96

Query: 125 LAKMSFEEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKVGSIKSTVPVTDGASS 179
           +AKMS +  DLT D +GL   ELE+L D +   + +KY  VG     +   DG+ +
Sbjct: 97  VAKMSLDPADLTHDTTGLTAEELESLDDVFTRVYKAKYPIVGYTARRILNEDGSPN 152

Displays neurotrophic activity and activates phosphorylation of MAPK1/ERK2, MAPK3/ERK1 and AKT1/AKT in primary cultured neurons. Does not have mitogenic activity in primary cultured astrocytes. May play a role on neuronal differentiation and may have a transient effect on neural cell proliferation in neural precursor cells. Neurotrophic activity is enhanced by binding to heme.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	239
255539487	242	steroid binding protein, putative [Ricin	0.899	0.888	0.738	2e-90
224122412	215	predicted protein [Populus trichocarpa]	0.899	1.0	0.723	1e-88
224134737	215	predicted protein [Populus trichocarpa]	0.899	1.0	0.719	2e-87
343173100	216	membrane steroid-binding protein, partia	0.899	0.995	0.729	9e-83
225470692	215	PREDICTED: membrane steroid-binding prot	0.882	0.981	0.706	9e-83
388493398	228	unknown [Lotus japonicus]	0.949	0.995	0.679	4e-82
357498319	235	Membrane steroid-binding protein [Medica	0.966	0.982	0.644	1e-78
356559831	222	PREDICTED: membrane steroid-binding prot	0.920	0.990	0.676	1e-78
217072942	235	unknown [Medicago truncatula]	0.966	0.982	0.640	1e-77
356530872	220	PREDICTED: membrane steroid-binding prot	0.916	0.995	0.675	7e-77

>gi|255539487|ref|XP_002510808.1| steroid binding protein, putative [Ricinus communis] gi|223549923|gb|EEF51410.1| steroid binding protein, putative [Ricinus communis]

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 175/237 (73%), Positives = 186/237 (78%), Gaps = 22/237 (9%)

Query: 1   MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQM 60
           MALQLWET KEAIT YTGLSPA FFTV+AL  A+YYV+SGMFGSSD HHQ R R +EEQM
Sbjct: 3   MALQLWETFKEAITVYTGLSPATFFTVLALGLAVYYVISGMFGSSDTHHQ-RPRSFEEQM 61

Query: 61  EPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKD 120
           +PLPPPVQLGE+TEEELKQYDGSD KKPLLMAIK QIYDVSQSRMFYGPGGPYALFAGKD
Sbjct: 62  QPLPPPVQLGEVTEEELKQYDGSDPKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKD 121

Query: 121 ASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSG 180
           ASRALAKMSFE+KDLTGDISGLGPFELEALQDWEYKFMSKYVKVG+IK  VPVTD A+S 
Sbjct: 122 ASRALAKMSFEDKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGTIKKPVPVTDEATSA 181

Query: 181 ESTEPKEGVVDTPAESKGVVDTPAETKEVDIAKPAEYGPSETAAAGPEATPSSDDTK 237
                                 PAE KEVD  KPAE GP+   A  P   PS+D  K
Sbjct: 182 SE--------------------PAENKEVDDTKPAEDGPTADVAK-PTEGPSADVAK 217

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122412|ref|XP_002318827.1| predicted protein [Populus trichocarpa] gi|222859500|gb|EEE97047.1| predicted protein [Populus trichocarpa]

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 173/239 (72%), Positives = 190/239 (79%), Gaps = 24/239 (10%)

Query: 1   MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQM 60
           MAL+LWETLKEAITAYTGLSPA FFTV AL  A+YYV+SG+FG SD HHQ   R+ EEQM
Sbjct: 1   MALELWETLKEAITAYTGLSPATFFTVAALGLAVYYVVSGLFGGSD-HHQHVPRQSEEQM 59

Query: 61  EPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKD 120
           +PLPPPVQLGEITEEELKQYDG+DSK PLLMAIK QIYDVSQSRMFYGPGGPYALFAGKD
Sbjct: 60  QPLPPPVQLGEITEEELKQYDGTDSKNPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKD 119

Query: 121 ASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSG 180
           ASRALAKMSFE+KDLTGD+SGLGPFELEALQDWEYKFMSKY+KVG+IK TVPVTDG S+ 
Sbjct: 120 ASRALAKMSFEDKDLTGDVSGLGPFELEALQDWEYKFMSKYIKVGTIKKTVPVTDGTSTS 179

Query: 181 ESTEPKEGVVDTPAESKGVVDTPAETKEVDIAKPAEYGPSETAAAGPEATPSSDDTKKE 239
           E           PA         AE  E D+AKPAE  PS    A P  TP+  ++K+E
Sbjct: 180 E-----------PA---------AEATESDVAKPAEDVPS---VAAPVETPAGGESKEE 215

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134737|ref|XP_002321894.1| predicted protein [Populus trichocarpa] gi|118482553|gb|ABK93197.1| unknown [Populus trichocarpa] gi|222868890|gb|EEF06021.1| predicted protein [Populus trichocarpa]

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 172/239 (71%), Positives = 190/239 (79%), Gaps = 24/239 (10%)

Query: 1   MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQM 60
           MAL+LWETLKEAITAYTGLSPA FFTV+AL  A YYV+SG FG SDNH Q   R+YEEQM
Sbjct: 1   MALELWETLKEAITAYTGLSPATFFTVLALGLAAYYVISGFFGGSDNH-QHVPRQYEEQM 59

Query: 61  EPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKD 120
           +PLPPPVQLGE+TEEELKQYDG+DS KPLLMAIK QIYDVSQSRMFYGPGGPYALFAGKD
Sbjct: 60  QPLPPPVQLGEVTEEELKQYDGTDSTKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKD 119

Query: 121 ASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSG 180
           ASRALAKMSFE+KDLTGD+SGLGPFELEALQDWEYKFMSKY KVG+IK+TVPVTDG S+ 
Sbjct: 120 ASRALAKMSFEDKDLTGDVSGLGPFELEALQDWEYKFMSKYEKVGTIKNTVPVTDGTSTS 179

Query: 181 ESTEPKEGVVDTPAESKGVVDTPAETKEVDIAKPAEYGPSETAAAGPEATPSSDDTKKE 239
           E           PA         AE  E D +KPAE GP+ TA      TP+  ++K+E
Sbjct: 180 E-----------PA---------AEATESDASKPAEDGPAATAHV---ETPAVAESKEE 215

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343173100|gb|AEL99253.1| membrane steroid-binding protein, partial [Silene latifolia] gi|343173102|gb|AEL99254.1| membrane steroid-binding protein, partial [Silene latifolia]

 Score =  312 bits (799), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 159/218 (72%), Positives = 174/218 (79%), Gaps = 3/218 (1%)

Query: 1   MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQM 60
           MAL+LWETLKEAIT YTGLSPA FFTVVAL  A Y+ + G+FGSS + + Q  R +EEQM
Sbjct: 1   MALELWETLKEAITVYTGLSPATFFTVVALSLAFYHAVFGLFGSSSSANHQHPRSFEEQM 60

Query: 61  EPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKD 120
           EPLPPPVQLGEITE+ELKQYDGSDSKKPLLMAIK QIYDVSQSRMFYGPGGPYALFAGKD
Sbjct: 61  EPLPPPVQLGEITEDELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKD 120

Query: 121 ASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSG 180
           ASRALAKMSFE+KDLTGDISGLGPFELEALQDWEYKFMSKYVKVG+IK  V   D  S  
Sbjct: 121 ASRALAKMSFEDKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGTIKKDVASGDEPS-- 178

Query: 181 ESTEPKEGVVDTPAESKGVVDTPAETKEVDIAKPAEYG 218
            S+EP E V  T +E     D P E+  V+    +  G
Sbjct: 179 -SSEPSEAVKATDSEVPKQEDAPQESAAVETVNTSSLG 215

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470692|ref|XP_002262780.1| PREDICTED: membrane steroid-binding protein 2 [Vitis vinifera] gi|147841765|emb|CAN62209.1| hypothetical protein VITISV_008090 [Vitis vinifera]

 Score =  312 bits (799), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 166/235 (70%), Positives = 182/235 (77%), Gaps = 24/235 (10%)

Query: 1   MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQM 60
           MALQLWETLKEAITAYTGLSP AFFT++AL  A+Y+V+SG F S    H  R RE  ++M
Sbjct: 1   MALQLWETLKEAITAYTGLSPTAFFTILALALAVYHVVSGFFVSP--VHPVRERELFKEM 58

Query: 61  EPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKD 120
           EPLPPPVQLGEITEEELK YDGSDSKKPLLMAIK QIYDVSQ R+FYGPGGPYALFAGKD
Sbjct: 59  EPLPPPVQLGEITEEELKTYDGSDSKKPLLMAIKGQIYDVSQGRIFYGPGGPYALFAGKD 118

Query: 121 ASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSG 180
           ASRALAKMSFEE+DLTGD+S LGPFELEALQDWEYKFMSKY KVG+IK T PVTDG+S+ 
Sbjct: 119 ASRALAKMSFEEQDLTGDLSDLGPFELEALQDWEYKFMSKYTKVGTIKKTFPVTDGSSTV 178

Query: 181 ESTEPKEGVVDTPAESKGVVDTPAETKEVDIAKPAEYGPSETAAAGP-EATPSSD 234
           E                     P+ET + DIAKPAE GPSE+  A P EAT   D
Sbjct: 179 E---------------------PSETTDRDIAKPAEDGPSESLPAKPVEATTGGD 212

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493398|gb|AFK34765.1| unknown [Lotus japonicus]

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 163/240 (67%), Positives = 187/240 (77%), Gaps = 13/240 (5%)

Query: 1   MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQ-RSREYEEQ 59
           MAL+LW TLKEAI AYTG SP  FFT++A+ +A+YYVLSG+FGSSD H++   +R++E Q
Sbjct: 1   MALELWSTLKEAIVAYTGFSPTTFFTLLAIFFALYYVLSGLFGSSDTHNRHGTTRDFEPQ 60

Query: 60  MEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGK 119
           MEPL PPVQ+GE+TEEELK YDGSD +KPLLMAIK QIYDVSQSRMFYGPGGPYALFAGK
Sbjct: 61  MEPLRPPVQIGEVTEEELKSYDGSDPEKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGK 120

Query: 120 DASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASS 179
           DASRALAKMSFEEKDLTGDISGLG FEL+ALQDWEYKFMSKYVKVG+IK+TV VT  A  
Sbjct: 121 DASRALAKMSFEEKDLTGDISGLGSFELDALQDWEYKFMSKYVKVGTIKTTVTVT--APE 178

Query: 180 GESTEPKEGVVDTPAESKGVVDTPAETKEVDIAKPAEYGPSETAAAGPEATPSSDDTKKE 239
             + EP E    TP          A+  + D +KP E GPSET A   + TPS+ D  KE
Sbjct: 179 STTGEPSESTT-TPD---------ADADDDDASKPTENGPSETEAVKSDETPSNIDAAKE 228

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357498319|ref|XP_003619448.1| Membrane steroid-binding protein [Medicago truncatula] gi|355494463|gb|AES75666.1| Membrane steroid-binding protein [Medicago truncatula] gi|388492194|gb|AFK34163.1| unknown [Medicago truncatula]

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 156/242 (64%), Positives = 181/242 (74%), Gaps = 11/242 (4%)

Query: 1   MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRS-REYEEQ 59
           MALQLW T KEAI  YTGLSP  FFT++ +L+ +YY+++ +FGSSD H +  S R++  +
Sbjct: 1   MALQLWSTFKEAIVVYTGLSPTTFFTLLVILFTLYYIITSLFGSSDTHQRHGSTRDFAAE 60

Query: 60  MEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGK 119
           MEPL PPVQ+GE+TE+ELK YDG++  KPLLMAIK QIYDVSQSRMFYGPGGPYALFAGK
Sbjct: 61  MEPLKPPVQIGEVTEDELKDYDGNNPDKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGK 120

Query: 120 DASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASS 179
           DASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFM KYVKVG+IK TVPVT   S+
Sbjct: 121 DASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMGKYVKVGTIK-TVPVTKPEST 179

Query: 180 GESTEPKEGVVDTPAESKGVVDTPAETKE-VDIAKPAEYGPSETA-AAGPEATPSSDDTK 237
           GE +E     VD  +        P E  +  + +KP E  PSETA     E TP S D  
Sbjct: 180 GEPSESTSRGVDASS-------IPHENHDAAEASKPHENTPSETAPVKSDENTPLSVDAD 232

Query: 238 KE 239
           KE
Sbjct: 233 KE 234

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559831|ref|XP_003548200.1| PREDICTED: membrane steroid-binding protein 2-like [Glycine max]

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 163/241 (67%), Positives = 187/241 (77%), Gaps = 21/241 (8%)

Query: 1   MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMF-GSSDNHHQQRSREYEEQ 59
           MALQLWETLKEAI AYTGLSP  FFT++AL+ A+YYV+SG+F  SSD+ H   SR++E Q
Sbjct: 1   MALQLWETLKEAIEAYTGLSPNTFFTLLALILALYYVVSGLFPSSSDHRHNTASRDFEPQ 60

Query: 60  MEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGK 119
           MEPL PPVQ+GE+TEEELK YDGSD +KPLLMAIK QIYDVSQSRMFYGPGGPYALFAGK
Sbjct: 61  MEPLRPPVQIGEVTEEELKAYDGSDPEKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGK 120

Query: 120 DASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASS 179
           DASRALAKMSFEEKDLTGDISGLGPFE+EALQDWEYKFM KYVKVG++K TVPVT+  S+
Sbjct: 121 DASRALAKMSFEEKDLTGDISGLGPFEVEALQDWEYKFMGKYVKVGTVKKTVPVTEPEST 180

Query: 180 GESTEPKEGVVDTPAESKGVVDTPAETKEVDIAKPAE-YGPSETAAAGPEATPSSDDTKK 238
           GE+ E                   +   + + +KP E  GPSE+AAA  + TPS  D  K
Sbjct: 181 GEAAE-------------------SNVHDAESSKPTEDDGPSESAAAKNDGTPSKIDADK 221

Query: 239 E 239
           E
Sbjct: 222 E 222

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072942|gb|ACJ84831.1| unknown [Medicago truncatula]

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 155/242 (64%), Positives = 180/242 (74%), Gaps = 11/242 (4%)

Query: 1   MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRS-REYEEQ 59
           MALQLW T KEAI  YTGLSP  FFT++ +L+ +YY+++ +FGSSD H +  S R++  +
Sbjct: 1   MALQLWSTFKEAIVVYTGLSPTTFFTLLVILFTLYYIITSLFGSSDTHQRHGSTRDFAAE 60

Query: 60  MEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGK 119
           MEPL P VQ+GE+TE+ELK YDG++  KPLLMAIK QIYDVSQSRMFYGPGGPYALFAGK
Sbjct: 61  MEPLKPLVQIGEVTEDELKDYDGNNPDKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGK 120

Query: 120 DASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASS 179
           DASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFM KYVKVG+IK TVPVT   S+
Sbjct: 121 DASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMGKYVKVGTIK-TVPVTKPEST 179

Query: 180 GESTEPKEGVVDTPAESKGVVDTPAETKE-VDIAKPAEYGPSETA-AAGPEATPSSDDTK 237
           GE +E     VD  +        P E  +  + +KP E  PSETA     E TP S D  
Sbjct: 180 GEPSESTSRGVDASS-------IPHENHDAAEASKPHENTPSETAPVKSDENTPLSVDAD 232

Query: 238 KE 239
           KE
Sbjct: 233 KE 234

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530872|ref|XP_003534003.1| PREDICTED: membrane steroid-binding protein 2-like [Glycine max]

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 162/240 (67%), Positives = 185/240 (77%), Gaps = 21/240 (8%)

Query: 1   MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQM 60
           MALQLWETLKEAI AYTGLSP  FFT++AL+ A+YYV+SG+F SSD+ H   SR+ E QM
Sbjct: 1   MALQLWETLKEAIVAYTGLSPPTFFTLLALILALYYVVSGLFPSSDHRHNTASRDLEPQM 60

Query: 61  EPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKD 120
           EPL PPVQ+GE+TE++LK YDG+D +KPLLMAIK QIYDVSQSRMFYGPGGPYALFAGKD
Sbjct: 61  EPLRPPVQIGEVTEDDLKAYDGTDPEKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKD 120

Query: 121 ASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSG 180
           ASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFM KYVKVG++  TVPVT+  S+ 
Sbjct: 121 ASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMGKYVKVGTVTKTVPVTEPESTA 180

Query: 181 ESTEPKEGVVDTPAESKGVVDTPAETKEVDIAKPAE-YGPSETAAAGPEATPSSDDTKKE 239
           E           P+ES         T   + +KP E  GPSE+AAA  + TPS  D  KE
Sbjct: 181 E-----------PSES---------TPHDESSKPTEDDGPSESAAAKNDETPSKVDADKE 220

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	239
TAIR|locus:2099453	233	MAPR3 "membrane-associated pro	0.958	0.982	0.646	2.9e-71
TAIR|locus:2145101	220	MSBP1 "membrane steroid bindin	0.853	0.927	0.680	3.5e-68
TAIR|locus:2047401	100	MAPR2 "membrane-associated pro	0.414	0.99	0.505	1.8e-23
FB|FBgn0030703	248	MSBP "membrane steroid binding	0.711	0.685	0.357	4.8e-23
RGD|1303289	171	Nenf "neudesin neurotrophic fa	0.464	0.649	0.464	1.7e-20
ASPGD|ASPL0000077297	167	AN4939 [Emericella nidulans (t	0.430	0.616	0.432	1.5e-19
MGI|MGI:1913458	171	Nenf "neuron derived neurotrop	0.464	0.649	0.447	1.5e-19
RGD|70890	195	Pgrmc1 "progesterone receptor	0.443	0.543	0.432	5.1e-19
UNIPROTKB|A3RKG5	165	PGRMC2 "Progesterone receptor	0.531	0.769	0.353	6.5e-19
ZFIN|ZDB-GENE-041114-91	179	pgrmc1 "progesterone receptor	0.464	0.620	0.396	6.5e-19

TAIR|locus:2099453 MAPR3 "membrane-associated progesterone binding protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
 Identities = 157/243 (64%), Positives = 179/243 (73%)

Query:     1 MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQM 60
             M  Q+WETLKE ITAYTGLSPAAFFTV+AL +A+Y V+SG F S + H + RS E + Q 
Sbjct:     1 MVQQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVH-RPRSLEVQPQS 59

Query:    61 EPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKD 120
             EPLPPPVQLGEITEEELK YDGSDSKKPLLMAIK QIYDVSQSRMFYGPGGPYALFAGKD
Sbjct:    60 EPLPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKD 119

Query:   121 ASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSG 180
             ASRALAKMSFE++DLTGDISGLG FELEALQDWEYKFMSKYVKVG+I+      DG    
Sbjct:   120 ASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTIQKK----DGEGK- 174

Query:   181 ESTEPKEGVVDTPAESKGV-VDTPAETKEV---DIAKPAEYGPSETAAAGPEATPSSDDT 236
             ES+EP E      A ++G+  +T  E   +   + ++      +ET      AT   DD 
Sbjct:   175 ESSEPSEAKT---ASAEGLSTNTGEEASAITHDETSRSTGEKIAETTEKKDVAT-DDDDA 230

Query:   237 KKE 239
              KE
Sbjct:   231 AKE 233

GO:0005886 "plasma membrane" evidence=ISM

GO:0020037 "heme binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0048523 "negative regulation of cellular process" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2145101 MSBP1 "membrane steroid binding protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
 Identities = 147/216 (68%), Positives = 165/216 (76%)

Query:     1 MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGS--SDNHHQQRSREYEE 58
             MAL+LW+TLKEAI AYTGLSP  FFT +AL +AIY V+SG F S   D +  QR+R   +
Sbjct:     1 MALELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQ 60

Query:    59 QMEP-LPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFA 117
             + EP +P PVQ+GEITEEELKQYDGSD +KPLLMAIK QIYDV+QSRMFYGPGGPYALFA
Sbjct:    61 EEEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFA 120

Query:   118 GKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGA 177
             GKDASRALAKMSFEEKDLT D+SGLGPFEL+ALQDWEYKFMSKY KVG++K      + A
Sbjct:   121 GKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTVKVAGSEPETA 180

Query:   178 SSGESTEPKEG---VVDTPAESKGVVD----TPAET 206
             S  E TE  E    V  TP   K VVD     PAET
Sbjct:   181 SVSEPTENVEQDAHVTTTPG--KTVVDKSDDAPAET 214

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0020037 "heme binding" evidence=IEA

GO:0005496 "steroid binding" evidence=IDA

GO:0030308 "negative regulation of cell growth" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

GO:0048523 "negative regulation of cellular process" evidence=RCA

TAIR|locus:2047401 MAPR2 "membrane-associated progesterone binding protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 50/99 (50%), Positives = 69/99 (69%)

Query:    71 EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF 130
             E T E+L QY+G+D  KP+ +AIK +++DV+  + FYG GG Y++FAGKDASRAL KMS 
Sbjct:     2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 61

Query:   131 EEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKS 169
              E+D++  + GL   E+  L DWE KF +KY  VG + S
Sbjct:    62 NEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 100

GO:0005576 "extracellular region" evidence=ISM

GO:0020037 "heme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

FB|FBgn0030703 MSBP "membrane steroid binding protein" [Drosophila melanogaster (taxid:7227)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 64/179 (35%), Positives = 99/179 (55%)

Query:    61 EPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKD 120
             EP  P ++  + T +EL+QYDG+     +L+A+   +YDVS+ R FYGPGGPYA FAG+D
Sbjct:    73 EPELPKIRR-DFTVKELRQYDGTQPDGRVLVAVNGSVYDVSKGRRFYGPGGPYATFAGRD 131

Query:   121 ASRALAKMSFE--EKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGAS 178
             ASR LA  S    +KD   D+S L   E++++++WE +F  KY  VG +   +   +  +
Sbjct:   132 ASRNLATFSVVSIDKDEYDDLSDLSAVEMDSVREWEMQFKEKYELVGKL---LRKGEEPT 188

Query:   179 SGESTEPKEGVVDTPAESKGVVDTPAETKEVDIAKPAEYGPSETAA---AGPEATPSSD 234
             + +  E +E V +   E K +  +  ET +    K +    S       A  +ATPS+D
Sbjct:   189 NYDDDEDEENVNNDEQERKNLPKSKTETDDTKQEKESHILQSNVTNKNNAQDQATPSTD 247

GO:0020037 "heme binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0035100 "ecdysone binding" evidence=IDA

RGD|1303289 Nenf "neudesin neurotrophic factor" [Rattus norvegicus (taxid:10116)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 53/114 (46%), Positives = 71/114 (62%)

Query:    65 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRA 124
             PPV+L   TEEEL +Y G +  +P+ +A+K  ++DV+  + FYG G PY   AGKD+SR 
Sbjct:    41 PPVRL--FTEEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRG 98

Query:   125 LAKMSFEEKDLTGDISGLGPFELEALQDWEYK-FMSKYVKVGSIKSTVPVTDGA 177
             +AKMS +  DLT DISGL   ELEAL D   K + +KY  VG     +   DG+
Sbjct:    99 VAKMSLDPADLTHDISGLTAKELEALDDIFSKVYKAKYPIVGYTARRILNEDGS 152

GO:0005615 "extracellular space" evidence=IEA;ISO

GO:0008083 "growth factor activity" evidence=IEA;ISO

GO:0020037 "heme binding" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA;ISO

GO:0046872 "metal ion binding" evidence=IEA

ASPGD|ASPL0000077297 AN4939 [Emericella nidulans (taxid:162425)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 48/111 (43%), Positives = 71/111 (63%)

Query:    64 PPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASR 123
             P PV     T + L  ++G ++ KP+ +A++ +++DV+  R FYGPGGPY  FAG+DASR
Sbjct:    47 PAPVVFRTFTPKTLLPFNG-ENDKPVYLAVRGRVFDVTPGRNFYGPGGPYENFAGRDASR 105

Query:   124 ALAKMSFEEKDLTGDISG-------LGPFELEALQDWEYKFMSKYVKVGSI 167
              LA  SF+++ LT D+SG       L   +LE LQ WE +F+ KY+ VG +
Sbjct:   106 GLAFQSFDKEMLTEDLSGPLDDLKDLNADQLENLQSWEERFLEKYLVVGKL 156

GO:0032443 "regulation of ergosterol biosynthetic process" evidence=IEA

GO:0006696 "ergosterol biosynthetic process" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

MGI|MGI:1913458 Nenf "neuron derived neurotrophic factor" [Mus musculus (taxid:10090)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 51/114 (44%), Positives = 70/114 (61%)

Query:    65 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRA 124
             PPV+L   TEEEL +Y G +  +P+ +A+K  ++DV+  + FYG G PY   AGKD+SR 
Sbjct:    41 PPVRL--FTEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRG 98

Query:   125 LAKMSFEEKDLTGDISGLGPFELEALQDWEYK-FMSKYVKVGSIKSTVPVTDGA 177
             +AKMS +  DLT D +GL   ELEAL D   K + +KY  VG     +   DG+
Sbjct:    99 VAKMSLDPADLTHDTTGLTAKELEALDDVFSKVYKAKYPIVGYTARRILNEDGS 152

GO:0005576 "extracellular region" evidence=IEA

GO:0005615 "extracellular space" evidence=IDA

GO:0008083 "growth factor activity" evidence=IDA

GO:0020037 "heme binding" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

RGD|70890 Pgrmc1 "progesterone receptor membrane component 1" [Rattus norvegicus (taxid:10116)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 48/111 (43%), Positives = 69/111 (62%)

Query:    61 EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGK 119
             EP P P ++  + T  EL++YDG    + +LMAI  +++DV++ R FYGP GPY +FAG+
Sbjct:    61 EPPPLPRLKPRDFTPAELRRYDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGR 119

Query:   120 DASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 167
             DASR LA    ++   KD   D+S L P + E L DW+ +F  KY  VG +
Sbjct:   120 DASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKL 170

GO:0005496 "steroid binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0007411 "axon guidance" evidence=IEP

GO:0009986 "cell surface" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

UNIPROTKB|A3RKG5 PGRMC2 "Progesterone receptor membrane component 2" [Sus scrofa (taxid:9823)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 47/133 (35%), Positives = 77/133 (57%)

Query:    40 GMFGSSDNHHQQRSREYEEQMEPLP--PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQI 97
             G  GS        S E   +  P    P ++  + + E+L+QYDGS + + +L+A+  ++
Sbjct:    11 GTLGSGSESSSDGSSESPGEESPAASLPRMKKRDFSLEQLRQYDGSRTPR-ILLAVNGKV 69

Query:    98 YDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWE 154
             +DV++   FYGP GPY +FAG+DASR LA    ++   KD   D+S L   ++E++++WE
Sbjct:    70 FDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALKDEYDDLSDLNAVQMESVREWE 129

Query:   155 YKFMSKYVKVGSI 167
              +F  KY  VG +
Sbjct:   130 MQFKEKYDYVGRL 142

GO:0020037 "heme binding" evidence=IEA

ZFIN|ZDB-GENE-041114-91 pgrmc1 "progesterone receptor membrane component 1" [Danio rerio (taxid:7955)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 46/116 (39%), Positives = 72/116 (62%)

Query:    55 EYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYA 114
             +Y    EPLP  ++  + T  +L++YDG  + + +LMA+  +++DV++ + FYGP GPY 
Sbjct:    44 DYGPVEEPLPK-LKKRDFTLADLQEYDGLKNPR-ILMAVNGKVFDVTRGKKFYGPEGPYG 101

Query:   115 LFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSI 167
             +FAGKDASR LA    E+   KD   D+S L   + E+L +WE +F  KY  +G +
Sbjct:   102 VFAGKDASRGLATFCLEKEALKDTHDDLSDLNAMQQESLSEWETQFTQKYDYIGKL 157

GO:0020037 "heme binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M2Z4	MSBP2_ARATH	No assigned EC number	0.7754	0.7573	0.7768	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	239
pfam00173	74	pfam00173, Cyt-b5, Cytochrome b5-like Heme/Steroid	1e-14

>gnl|CDD|201057 pfam00173, Cyt-b5, Cytochrome b5-like Heme/Steroid binding domain

 Score = 66.1 bits (162), Expect = 1e-14
 Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 27/99 (27%)

Query: 72  ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGG--PYALFAGKDASRALAKMS 129
            T EE+K+++         + I  ++YDV+   +   PGG       AGKDA+ A     
Sbjct: 1   FTLEEVKKHN---KDGDCWIVINGKVYDVT-RFLKDHPGGEDVILSAAGKDATEA----- 51

Query: 130 FEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIK 168
                          FE     +   K + KY +VG + 
Sbjct: 52  ---------------FEDAIHSEAARKLLEKY-RVGELD 74

This family includes heme binding domains from a diverse range of proteins. This family also includes proteins that bind to steroids. The family includes progesterone receptors. Many members of this subfamily are membrane anchored by an N-terminal transmembrane alpha helix. This family also includes a domain in some chitin synthases. There is no known ligand for this domain in the chitin synthases. Length = 74

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	239
KOG1110	183	consensus Putative steroid membrane receptor Hpr6.	100.0
KOG1108	281	consensus Predicted heme/steroid binding protein [	100.0
PF00173	76	Cyt-b5: Cytochrome b5-like Heme/Steroid binding do	99.61
COG4892	81	Predicted heme/steroid binding protein [General fu	99.48
KOG0536	145	consensus Flavohemoprotein b5+b5R [Energy producti	99.32
KOG0537	124	consensus Cytochrome b5 [Energy production and con	99.11
COG5274	164	CYB5 Cytochrome b involved in lipid metabolism [En	98.64
PLN03198	526	delta6-acyl-lipid desaturase; Provisional	98.47
PLN03199	485	delta6-acyl-lipid desaturase-like protein; Provisi	98.45
PLN02252	888	nitrate reductase [NADPH]	98.31
KOG4232	430	consensus Delta 6-fatty acid desaturase/delta-8 sp	97.53
KOG4576	167	consensus Sulfite oxidase, heme-binding component	94.81

>KOG1110 consensus Putative steroid membrane receptor Hpr6

Probab=100.00  E-value=2.1e-43  Score=303.02  Aligned_cols=154  Identities=48%  Similarity=0.797  Sum_probs=124.4

Q ss_pred             hhCCChHHHHHHHHHHHHHHHHHhcccCCC--CCcccccchhhhhccCCCCCCcccCCCCHHHHhhhcCCCCCCCEEEEE
Q 026393           16 YTGLSPAAFFTVVALLWAIYYVLSGMFGSS--DNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAI   93 (239)
Q Consensus        16 ~~g~sp~n~~tila~~~~ly~iv~~~f~~~--~~~~~~~~~~~e~~~~~l~~P~~~~~fT~eELa~ydG~~~~~piyvAI   93 (239)
                      |+|+++-.+++.++++++++.++..++-..  .++...++.. ..+.+|...+.+.+.||++||++|||.++++||||||
T Consensus         1 ~~gl~~~~~~tpl~~al~~~~l~~~~kl~~~~~r~~~~~~~~-~~~~~P~~~~P~~~dfT~eEL~~ydGs~~d~~Il~AI   79 (183)
T KOG1110|consen    1 YVGLAPKVFFTPLALALLIFLLFVGLKLSRFKFRRDSEKSDG-STEEPPKESLPKVRDFTVEELRQYDGSDPDKPILLAI   79 (183)
T ss_pred             CCccchhhhhhhHHHHHHHHHHHhheeeeeeecccccccccc-CCCCCCccCCCcccccCHHHHHhcCCCCCCCceEEEe
Confidence            467777777777777777777766654332  1111111111 1111122222334589999999999999889999999


Q ss_pred             cCeEEeccCCCcccCCCCcccccCCCchHHHHHhhcCCCcccCCCCCCCCHHHhhhHHHHHHHHhccCceeEEeccc
Q 026393           94 KSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKST  170 (239)
Q Consensus        94 ~G~VYDVT~~~~fYgPGG~Y~~fAGrDaSr~fa~~s~d~~dl~~dls~L~~~e~~~L~~W~~~f~~KYp~VG~Lv~~  170 (239)
                      ||+|||||+|+.||||||+|..||||||||+|++||++..++++|++||+..|+++|++|+++|+.||++||+|++.
T Consensus        80 ~G~VYDVT~Gr~FYGp~GpY~~fAG~DASR~La~~s~d~~d~~ddlsdL~a~e~eal~eWE~~fk~KY~~VG~L~~~  156 (183)
T KOG1110|consen   80 NGKVYDVTRGREFYGPGGPYSLFAGKDASRGLAKMSFDLSDETDDLSDLTAEELEALNEWETKFKAKYPVVGRLVKK  156 (183)
T ss_pred             cceEEEecCCccccCCCCCchhhcccchHHHHHhcccchhhccccccccCHHHHHHHHHHHHHHhhcCceeEEeecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999986

6/25-Dx [General function prediction only]

>KOG1108 consensus Predicted heme/steroid binding protein [General function prediction only]

Probab=100.00  E-value=2.3e-33  Score=249.83  Aligned_cols=115  Identities=37%  Similarity=0.617  Sum_probs=111.4

Q ss_pred             cCCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCcccccCCCchHHHHHhhcCCCcccCCCCCCCCHHHhh
Q 026393           69 LGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELE  148 (239)
Q Consensus        69 ~~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~Y~~fAGrDaSr~fa~~s~d~~dl~~dls~L~~~e~~  148 (239)
                      ++.||++||++|||.+.++|||+||.|.|||||+++.|||||++|++||||||||+|.++.|.+..+.+|+.+|++.|+.
T Consensus        59 k~lFtpeeLa~fnGt~e~~piyLaiLGsVfdVs~gk~hYgsG~sYnhFaGRDASrAFvsGdf~e~gl~d~v~gLs~dEll  138 (281)
T KOG1108|consen   59 KILFTPEELAKFNGTEEGRPIYLAILGSVFDVSRGKKHYGSGCSYNHFAGRDASRAFVSGDFEEPGLADDVLGLSPDELL  138 (281)
T ss_pred             ceeeCHHHHhhccCCCCCCceeeeeeceeeeccCCeeeeCCCCCcccccccccchheecccCCCCcchhhhccCCHHHHh
Confidence            35799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhccCceeEEecccccCCCCCCCCCCC
Q 026393          149 ALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGEST  183 (239)
Q Consensus       149 ~L~~W~~~f~~KYp~VG~Lv~~~~~~dg~~t~e~~  183 (239)
                      +|.+|..||.+.|++||+|+++||+++|.+|.+..
T Consensus       139 si~dWrsFY~k~Y~~vGrv~gryYds~G~pT~~lt  173 (281)
T KOG1108|consen  139 SIADWRSFYQKDYVYVGRVIGRYYDSKGAPTPYLT  173 (281)
T ss_pred             hhhhhhhhhhcccceeeEEeeeeecCCCCCcHHHH
Confidence            99999999999999999999999999999998744

>PF00173 Cyt-b5: Cytochrome b5-like Heme/Steroid binding domain This prints entry is a subset of the Pfam entry; InterPro: IPR001199 Cytochromes b5 are ubiquitous electron transport proteins found in animals, plants and yeasts []

Probab=99.61  E-value=1.4e-15  Score=110.63  Aligned_cols=73  Identities=34%  Similarity=0.461  Sum_probs=61.8

Q ss_pred             CCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCC--cccccCCCchHHHHHhhcCCCcccCCCCCCCCHHHhh
Q 026393           71 EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGG--PYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELE  148 (239)
Q Consensus        71 ~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG--~Y~~fAGrDaSr~fa~~s~d~~dl~~dls~L~~~e~~  148 (239)
                      +||++||++|| .  +.++||+|+|+|||||.+. .++|||  .+..+||+|+|.+|                    +..
T Consensus         1 ~~t~~el~~h~-~--~~~~~v~i~g~VYDvt~~~-~~hpgg~~~~~~~aG~D~T~~f--------------------~~~   56 (76)
T PF00173_consen    1 VYTWEELAKHN-K--KGDCWVIIDGKVYDVTDFL-DRHPGGADILKKYAGRDATDAF--------------------EEA   56 (76)
T ss_dssp             EEEHHHHTTTE-E--TTEEEEEETTEEEECTTTT-TTSTTTSHHHHTTTTSBTHHHH--------------------HHH
T ss_pred             CCCHHHHhhhC-C--CCCEEEEECCEEccccccc-ccccchhHHHHHhccccccHHH--------------------hhc
Confidence            38999999999 2  2579999999999999976 578999  68999999999999                    223


Q ss_pred             hHHHHHHHHhccCceeEEe
Q 026393          149 ALQDWEYKFMSKYVKVGSI  167 (239)
Q Consensus       149 ~L~~W~~~f~~KYp~VG~L  167 (239)
                      ....|..++..+|.+||+|
T Consensus        57 ~h~~~~~~~l~~~~~vG~l   75 (76)
T PF00173_consen   57 FHSWWAEKCLEKYYKVGYL   75 (76)
T ss_dssp             THHHHHHHHHHGCGEEEEE
T ss_pred             cCcHHHHHHccCCCEEEEe
Confidence            3457888888999999997

The microsomal and mitochondrial variants are membrane-bound, while those from erythrocytes and other animal tissues are water-soluble [, ]. The 3D structure of bovine cyt b5 is known, the fold belonging to the alpha+beta class, with 5 strands and 5 short helices forming a framework for supporting a central haem group []. The cytochrome b5 domain is similar to that of a number of oxidoreductases, such as plant and fungal nitrate reductases, sulphite oxidase, yeast flavocytochrome b2 (L-lactate dehydrogenase) and plant cyt b5/acyl lipid desaturase fusion protein.; GO: 0020037 heme binding; PDB: 2I96_A 3KS0_A 1KBI_B 1KBJ_B 1LTD_A 1SZG_B 1SZF_A 1LDC_B 2OZ0_B 1LCO_A ....

>COG4892 Predicted heme/steroid binding protein [General function prediction only]

Probab=99.48  E-value=3.8e-14  Score=106.98  Aligned_cols=75  Identities=33%  Similarity=0.551  Sum_probs=58.2

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCccccc-CCCchHHHHHh-hcCCCcccCCCCCCCCHHHh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALF-AGKDASRALAK-MSFEEKDLTGDISGLGPFEL  147 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~Y~~f-AGrDaSr~fa~-~s~d~~dl~~dls~L~~~e~  147 (239)
                      |.||++||++|||.++  |+|||++|+|||||.+..| +-|-+...+ ||+|.|..|.. ...-               +
T Consensus         2 refTLEELs~ynG~nG--paYiA~~G~VYDvS~s~~W-~dGtHqglhsaG~DLs~~~~~~aphg---------------~   63 (81)
T COG4892           2 REFTLEELSKYNGENG--PAYIAVNGTVYDVSLSPSW-GDGTHQGLHSAGKDLSSEFNSCAPHG---------------M   63 (81)
T ss_pred             ceecHHHHHhhcCCCC--CeEEEECCEEEeeccCccc-CCCccccccccchhHHHHHhhcCCch---------------h
Confidence            5799999999999985  8999999999999998754 434455555 99999998873 2211               2


Q ss_pred             hhHHHHHHHHhccCceeEEeccc
Q 026393          148 EALQDWEYKFMSKYVKVGSIKST  170 (239)
Q Consensus       148 ~~L~~W~~~f~~KYp~VG~Lv~~  170 (239)
                      +.        -+.||+||.|++.
T Consensus        64 ei--------l~~~PvVG~L~k~   78 (81)
T COG4892          64 EI--------LTSLPVVGALIKE   78 (81)
T ss_pred             HH--------HhcCchhheeecc
Confidence            22        3789999999875

>KOG0536 consensus Flavohemoprotein b5+b5R [Energy production and conversion]

Probab=99.32  E-value=2.6e-12  Score=107.11  Aligned_cols=72  Identities=31%  Similarity=0.505  Sum_probs=60.8

Q ss_pred             CCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhhcCCCcccCCCCCCCCHHHhhh
Q 026393           72 ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEA  149 (239)
Q Consensus        72 fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~s~d~~dl~~dls~L~~~e~~~  149 (239)
                      +|.+||++||..++   |||+|+|+|||||.+.. |||||.  ....||+|||..|.+.                     
T Consensus        70 vt~~El~KH~~~dD---cW~~i~G~VYnVt~Yl~-fHPgG~d~lmk~aGrD~T~~Fnk~---------------------  124 (145)
T KOG0536|consen   70 VTAEELKKHNKKDD---CWIAIRGKVYNVTAYLD-FHPGGVDELMKHAGRDATKLFNKY---------------------  124 (145)
T ss_pred             cCHHHHHhhCCccc---eEEEEcCEEEecccccc-cCCCCHHHHHHhcCcchHHHHHHH---------------------
Confidence            89999999999875   99999999999999975 899997  6789999999999875                     


Q ss_pred             HHHHHHHH-hccCceeEEecc
Q 026393          150 LQDWEYKF-MSKYVKVGSIKS  169 (239)
Q Consensus       150 L~~W~~~f-~~KYp~VG~Lv~  169 (239)
                       ..|++.- .=+=-+||.|++
T Consensus       125 -H~WVN~e~LL~~c~VGvl~d  144 (145)
T KOG0536|consen  125 -HAWVNYEELLKKCFVGVLVD  144 (145)
T ss_pred             -HHHhcHHHHHhhceeeeecc
Confidence             7788532 224568898875

>KOG0537 consensus Cytochrome b5 [Energy production and conversion]

Probab=99.11  E-value=3.9e-11  Score=98.27  Aligned_cols=56  Identities=30%  Similarity=0.435  Sum_probs=47.6

Q ss_pred             cCCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhh
Q 026393           69 LGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKM  128 (239)
Q Consensus        69 ~~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~  128 (239)
                      .+.||++|.++||..++   |||.|+|+|||||++.. -||||.  ...+||+|||++|--.
T Consensus         4 ~k~~~~~EV~kHn~~~d---~Wvii~gkVYDvT~Fl~-eHPGG~~vLl~~AGkDaT~~F~~~   61 (124)
T KOG0537|consen    4 LKYYTLSEVAKHNKKDD---CWVIIHGKVYDVTSFLD-EHPGGEDVLLEYAGKDATEAFEDV   61 (124)
T ss_pred             cccccHHHHHhhcCCCC---eEEEECCEEEeccchhh-hCCChHHHHHHHhchhhHHhcccc
Confidence            36799999999997754   99999999999999853 478884  6799999999999643

>COG5274 CYB5 Cytochrome b involved in lipid metabolism [Energy production and conversion / Lipid metabolism]

Probab=98.64  E-value=3.6e-08  Score=84.63  Aligned_cols=58  Identities=34%  Similarity=0.450  Sum_probs=49.4

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhhcCC
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKMSFE  131 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~s~d  131 (239)
                      ..++.+|+.+|+..++   +||+|+|+|||||.+.. +||||.  ....+|+|||.+|...-.+
T Consensus        50 ~~~~~eev~~h~~~~d---~~ivi~g~VyDvs~fl~-~HPGGe~ii~~~~g~Dat~~f~~~~~~  109 (164)
T COG5274          50 KPITAEEVAKHNKSED---CWIVINGKVYDVSQFLD-EHPGGEDIIKDTAGKDATKAFNFLHHS  109 (164)
T ss_pred             ccccHHHHHHhcCccc---eEEEEcCEEEEhhhccc-cCCCcceeehhccCchhhhhhcccccc
Confidence            4589999999999864   99999999999999853 688886  5689999999999865443

>PLN03198 delta6-acyl-lipid desaturase; Provisional

Probab=98.47  E-value=9.3e-08  Score=94.33  Aligned_cols=56  Identities=23%  Similarity=0.404  Sum_probs=47.8

Q ss_pred             cCCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc-ccccCCCchHHHHHhh
Q 026393           69 LGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP-YALFAGKDASRALAKM  128 (239)
Q Consensus        69 ~~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~-Y~~fAGrDaSr~fa~~  128 (239)
                      .+.||.+|+++|+..++   |||+|+|+|||||++.. .||||. ...+||+|||..|...
T Consensus       103 ~~~~t~~ev~~H~~~~d---~Wivi~gkVYDvT~fl~-~HPGG~~i~~~aG~DaT~~F~~~  159 (526)
T PLN03198        103 SKSHLLSEVAAHNKPND---CWIVIKNKVYDVSDFAA-EHPGGSVISTYFGRDGTDAFSSF  159 (526)
T ss_pred             cCcCCHHHHHhhCCCCC---eEEEECCEEEecHHHHH-hCCCchHHHHhcCCcHhHHHHHh
Confidence            45899999999998754   99999999999998753 589997 3479999999999653

>PLN03199 delta6-acyl-lipid desaturase-like protein; Provisional

Probab=98.45  E-value=1.8e-07  Score=91.05  Aligned_cols=53  Identities=28%  Similarity=0.420  Sum_probs=46.3

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc-ccccCCCchHHHHHh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP-YALFAGKDASRALAK  127 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~-Y~~fAGrDaSr~fa~  127 (239)
                      +.||.+|+++|+..+   .+||.|+|+|||||++.  .||||. ...+||+|||..|..
T Consensus        24 ~~~s~~ev~~h~~~~---~~wi~i~g~vYDvt~f~--~HPGG~~i~~~aG~DaT~~F~~   77 (485)
T PLN03199         24 QKISWQEVKKHASPD---DAWIIHQNKVYDVSNWH--DHPGGAVIFTHAGDDMTDIFAA   77 (485)
T ss_pred             CccCHHHHHhhCCCC---CeEEEECCEEEcCCCcC--cCCCchHHHhhCCCChhHHHHH
Confidence            569999999999875   39999999999999984  599997 347899999999965

>PLN02252 nitrate reductase [NADPH]

Probab=98.31  E-value=6.8e-07  Score=93.02  Aligned_cols=55  Identities=20%  Similarity=0.389  Sum_probs=48.0

Q ss_pred             cCCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHh
Q 026393           69 LGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAK  127 (239)
Q Consensus        69 ~~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~  127 (239)
                      .+.||.+||++|+..+   .+||+|+|+|||||.+.. .||||.  ...+||+|||..|..
T Consensus       517 ~~~~t~~ev~~h~~~~---~~Wivi~g~VYDvT~fl~-~HPGG~~~I~~~aG~DaT~~F~~  573 (888)
T PLN02252        517 SKQYTMSEVRKHNSED---SCWIVVHGHVYDCTRFLK-DHPGGADSILINAGTDCTEEFDA  573 (888)
T ss_pred             cceeCHHHHHhhCcCC---CeEEEECCEEEeCHHHHH-HCCChHHHHHhhcCCCcHHHHhh
Confidence            4779999999999875   399999999999999853 589995  678999999999974

>KOG4232 consensus Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase [Lipid transport and metabolism]

Probab=97.53  E-value=2.3e-05  Score=75.88  Aligned_cols=55  Identities=27%  Similarity=0.474  Sum_probs=47.7

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhhc
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKMS  129 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~s  129 (239)
                      +.+|.++++++|+.++   .|++|.| |||+|.... -+|||+  ..+++|.|||.+|...-
T Consensus         8 ~~~~we~~~~~~~~~~---~W~~id~-vYd~s~~~~-~HPGG~~~I~~~~g~DaTdaF~AfH   64 (430)
T KOG4232|consen    8 TTFSWEGKRKHDKAEG---LWLVIDG-VYDISDWIK-RHPGGSRVIEHYAGQDATDAFEAFH   64 (430)
T ss_pred             eeeeccchhhccCCCc---eEEEeec-cccHHHHHH-hCCCchhHHHHhcCCccchHHHHhC
Confidence            4689999999999975   9999999 999999832 479996  68999999999998764

>KOG4576 consensus Sulfite oxidase, heme-binding component [Energy production and conversion]

Probab=94.81  E-value=0.02  Score=48.86  Aligned_cols=47  Identities=28%  Similarity=0.363  Sum_probs=37.9

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCcc-cccCCC
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPY-ALFAGK  119 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~Y-~~fAGr  119 (239)
                      ..|+.+|+++|+...  .+|||-..--|||||.+.. -+|||.- ..-||-
T Consensus        80 ~iY~~EEV~~H~s~e--~rIWVTyg~gVyDVTdFv~-~HPGGdKillAAG~  127 (167)
T KOG4576|consen   80 HIYTKEEVSSHTSPE--TRIWVTYGSGVYDVTDFVD-LHPGGDKILLAAGG  127 (167)
T ss_pred             cchhHHHHHhcCCCc--cceEEEecCcceeHHHHHH-hCCCcceeeeecCC
Confidence            459999999998875  4799999999999999864 5789864 445553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	239
1t0g_A	109	Hypothetical Protein At2g24940.1 From Arabidopsis T		7e-24
1j03_A	102	Solution Structure Of A Putative Steroid-Binding Pr		9e-24

>pdb|1T0G|A Chain A, Hypothetical Protein At2g24940.1 From Arabidopsis Thaliana Has A Cytochrome B5 Like Fold Length = 109

Iteration: 1
 Score =  107 bits (266), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 51/101 (50%), Positives = 70/101 (69%)
Query: 69  LGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKM 128
           L E T E+L QY+G+D  KP+ +AIK +++DV+  + FYG GG Y++FAGKDASRAL KM
Sbjct: 9   LEEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKM 68
Query: 129 SFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKS 169
           S  E+D++  + GL   E+  L DWE KF +KY  VG + S
Sbjct: 69  SKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 109

>pdb|1J03|A Chain A, Solution Structure Of A Putative Steroid-Binding Protein From Arabidopsis Length = 102

Iteration: 1
 Score =  106 bits (265), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 50/99 (50%), Positives = 69/99 (69%)
Query: 71  EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF 130
           E T E+L QY+G+D  KP+ +AIK +++DV+  + FYG GG Y++FAGKDASRAL KMS 
Sbjct: 4   EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 63
Query: 131 EEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKS 169
            E+D++  + GL   E+  L DWE KF +KY  VG + S
Sbjct: 64  NEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 102

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	239
1j03_A	102	Putative steroid binding protein; alpha and beta,	3e-38

>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A Length = 102

 Score =  127 bits (321), Expect = 3e-38
 Identities = 49/95 (51%), Positives = 67/95 (70%)

Query: 71  EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF 130
           E T E+L QY+G+D  KP+ +AIK +++DV+  + FYG GG Y++FAGKDASRAL KMS 
Sbjct: 4   EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 63

Query: 131 EEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVG 165
            E+D++  + GL   E+  L DWE KF +KY  VG
Sbjct: 64  NEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVG 98

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	239
1j03_A	102	Putative steroid binding protein; alpha and beta,	100.0
2ibj_A	88	Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY dif	99.49
3ner_A	92	Cytochrome B5 type B; heme, electron transport; HE	99.49
1x3x_A	82	Cytochrome B5; hemoprotein, porcine parasitic nama	99.41
1cyo_A	93	Cytochrome B5; electron transport; HET: HEM; 1.50A	99.41
1cxy_A	90	Cytochrome B5; helix, beta-strand, electron transp	99.4
3lf5_A	88	Cytochrome B5 reductase 4; NCB5OR, electron transf	99.39
2keo_A	112	Probable E3 ubiquitin-protein ligase HERC2; protei	99.37
1hko_A	104	Cytochrome B5; electron transfer protein, heme, el	99.33
1mj4_A	82	Sulfite oxidase; cytochrome B5, heme, oxidoreducta	99.14
1kbi_A	511	Cytochrome B2, L-LCR; flavocytochrome B2, electron	98.84
1sox_A	466	Sulfite oxidase; oxidoreductase, sulfite oxidation	98.51

>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A

Probab=100.00  E-value=2.7e-36  Score=237.14  Aligned_cols=99  Identities=49%  Similarity=0.875  Sum_probs=95.4

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCcccccCCCchHHHHHhhcCCCcccCCCCCCCCHHHhhh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEA  149 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~Y~~fAGrDaSr~fa~~s~d~~dl~~dls~L~~~e~~~  149 (239)
                      +.||++||++|||.++++||||||+|+|||||.++.||||||+|..|||+|||++|++++++++++++||++|++.|++.
T Consensus         3 ~~~T~~El~~~ng~~~~~~~~vaI~G~VYDVT~~~~~~hPGG~~~~~AG~DaT~~f~~~~~~~~~l~~dl~~L~~~e~~~   82 (102)
T 1j03_A            3 MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINT   82 (102)
T ss_dssp             CCCCHHHHTTCBSCSSSCCBEEEETTEEEECGGGHHHHSSSSTTTTTTTSBCHHHHHHTCCCSSSCCSSCSSCCHHHHHH
T ss_pred             cccCHHHHHHhcCCCCCCCEEEEECCEEEECCCCccccCCCCcccccccchHHHHHHHcCCChhhccCcccCCCHHHHHH
Confidence            46999999999999866789999999999999998899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCceeEEec
Q 026393          150 LQDWEYKFMSKYVKVGSIK  168 (239)
Q Consensus       150 L~~W~~~f~~KYp~VG~Lv  168 (239)
                      |++|+++|++||++||+|+
T Consensus        83 l~~W~~~f~~kY~~VG~l~  101 (102)
T 1j03_A           83 LNDWETKFEAKYPVVGRVV  101 (102)
T ss_dssp             HHHHHHHHHTTSCEEECCC
T ss_pred             HHHHHHHHhccCCeeeEEe
Confidence            9999999999999999997

>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica}

Probab=99.49  E-value=3.9e-14  Score=107.34  Aligned_cols=55  Identities=27%  Similarity=0.373  Sum_probs=48.4

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKM  128 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~  128 (239)
                      +.||.+||++||+.+   +|||+|+|+|||||.+.. +||||.  +..+||+|||++|...
T Consensus         7 ~~~t~~ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~~i~~~aG~DaT~~f~~~   63 (88)
T 2ibj_A            7 KYFTRAEVAKNNTKD---KNWFIIHNNVYDVTAFLN-EHPGGEEVLIEQAGKDATEHFEDV   63 (88)
T ss_dssp             CEECHHHHHTSEETT---EEEEEETTEEEECGGGTT-TCTTCSHHHHTTTTEECHHHHHHH
T ss_pred             CccCHHHHHHhCCCC---CEEEEECCEEEECCcchh-hCcCHHHHHHHhCCCcchHHHHHc
Confidence            569999999999864   599999999999999864 789997  4689999999999853

>3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} SCOP: d.120.1.1 PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A*

Probab=99.49  E-value=3.9e-14  Score=108.83  Aligned_cols=55  Identities=27%  Similarity=0.369  Sum_probs=48.8

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKM  128 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~  128 (239)
                      +.||++||++||+.+   +|||+|+|+|||||.+.. +||||.  +..+||+|||++|...
T Consensus        10 ~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~~l~~~aG~DaT~~F~~~   66 (92)
T 3ner_A           10 TYYRLEEVAKRNSLK---ELWLVIHGRVYDVTRFLN-EHPGGEEVLLEQAGVDASESFEDV   66 (92)
T ss_dssp             CEECHHHHTTCEETT---EEEEEETTEEEECGGGTT-TCTTCSHHHHTTTTSBCHHHHHHT
T ss_pred             CeeCHHHHHhhCCCC---CEEEEECCEEEEcccccc-cCCCHHHHHHHhcCCcchHHHHHc
Confidence            569999999999975   499999999999999863 799997  5689999999999853

>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum}

Probab=99.41  E-value=1e-13  Score=103.86  Aligned_cols=54  Identities=22%  Similarity=0.288  Sum_probs=47.3

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCC-cccccCCCchHHH--HHh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGG-PYALFAGKDASRA--LAK  127 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG-~Y~~fAGrDaSr~--fa~  127 (239)
                      +.||.+||++||+.+   .+||+|+|+|||||.+.. +|||| .+..+||+|||++  |..
T Consensus         4 ~~~t~~ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~i~~~aG~D~T~~~~F~~   60 (82)
T 1x3x_A            4 KKYTKEEVAKHNTQN---DLWIIYDGEVHDMTSFYK-EHPGGKVILNKAGQDATSVLKTLA   60 (82)
T ss_dssp             CEECHHHHHTCEETT---EEEEEETTEEEECGGGGG-GCTTGGGGGGGTTSBCHHHHHHSH
T ss_pred             CccCHHHHHhhCCCC---CEEEEECCEEEECCcchh-hCcChhhhhhhCCCCCchhhhhhc
Confidence            469999999999986   399999999999999864 78999 4668999999999  654

>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ...

Probab=99.41  E-value=8.8e-14  Score=106.85  Aligned_cols=55  Identities=24%  Similarity=0.359  Sum_probs=48.7

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKM  128 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~  128 (239)
                      +.||.+||++||+.+   +|||+|+|+|||||.+.. +||||.  +..+||+|||++|...
T Consensus         5 ~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~~i~~~aG~DaT~~f~~~   61 (93)
T 1cyo_A            5 KYYTLEEIQKHNNSK---STWLILHYKVYDLTKFLE-EHPGGEEVLREQAGGDATENFEDV   61 (93)
T ss_dssp             CEECHHHHTTCEETT---EEEEEETTEEEECTTTTT-TCTTCSHHHHHHTTSBCHHHHHHT
T ss_pred             CccCHHHHHhhCCCC---CEEEEECCEEEECCCcch-hCcChHHHHHHhcCccchHHHHHc
Confidence            569999999999875   499999999999999864 899997  5679999999999853

>1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1

Probab=99.40  E-value=2e-13  Score=104.07  Aligned_cols=55  Identities=22%  Similarity=0.370  Sum_probs=48.8

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKM  128 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~  128 (239)
                      +.||.+||++|++.+   +|||+|+|+|||||.+.. +||||.  +..+||+|||+.|...
T Consensus         8 ~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~~i~~~aG~DaT~~f~~~   64 (90)
T 1cxy_A            8 PVFTLEQVAEHHSPD---DCWMAIHGKVYDLTPYVP-NHPGPAGMMLVWCGQESTEAWETK   64 (90)
T ss_dssp             CBCCHHHHTTCEETT---EEEEEETTEEEECTTTGG-GCCSSTTTTGGGTTSBCHHHHHHT
T ss_pred             CCcCHHHHHHhcCCC---CEEEEECCEEEECccchh-hCcChHHHHHHHCCcchhHHHhhc
Confidence            569999999999975   499999999999999864 789996  6789999999999853

>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens}

Probab=99.39  E-value=1e-13  Score=105.72  Aligned_cols=55  Identities=35%  Similarity=0.526  Sum_probs=49.0

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKM  128 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~  128 (239)
                      +.||.+||++||+.+   ++||+|+|+|||||.+.. +||||.  +..+||+|||++|...
T Consensus         6 ~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~~l~~~aG~DaT~~F~~~   62 (88)
T 3lf5_A            6 IEVTEEELKKHNKKD---DCWICIRGFVYNVSPYME-YHPGGEDELMRAAGSDGTELFDQV   62 (88)
T ss_dssp             EEECHHHHHHCEETT---EEEEEETTEEEECGGGTT-TCTTCHHHHHTTTTEECHHHHHHH
T ss_pred             CEeCHHHHHhhCCCC---CEEEEECCEEEECccchh-hCcChhhhhhhcCCCcchHHHHHH
Confidence            569999999999985   499999999999999864 799997  6799999999999754

>2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens}

Probab=99.37  E-value=8.2e-14  Score=111.03  Aligned_cols=61  Identities=18%  Similarity=0.240  Sum_probs=49.0

Q ss_pred             CCCCcc--cCCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHh
Q 026393           63 LPPPVQ--LGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAK  127 (239)
Q Consensus        63 l~~P~~--~~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~  127 (239)
                      +.||+.  .+.||.+||++||+.+   ++||+|+|+|||||.+.. ++|||.  +..+||+|||++|..
T Consensus        15 ~~c~m~~~~~~~t~~Ev~~h~~~~---d~wvvi~G~VYDVT~fl~-~HPGG~~~l~~~aGkDaT~~F~~   79 (112)
T 2keo_A           15 YFQGNNEKVTLVRIADLENHNNDG---GFWTVIDGKVYDIKDFQT-QSLTENSILAQFAGEDPVVALEA   79 (112)
T ss_dssp             ------CCCCEECHHHHHHHHHHT---CCEEEETTEEEEHHHHHH-HHTSTTSTTGGGTTSCHHHHHHH
T ss_pred             ccccCCCCCCccCHHHHHHhcCCC---CEEEEECCEEEECCcchh-hCCCchhhhhhhCCccchHHHhH
Confidence            446665  5679999999999975   499999999999999854 689997  678999999999986

>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A*

Probab=99.33  E-value=3.7e-13  Score=105.67  Aligned_cols=54  Identities=24%  Similarity=0.356  Sum_probs=48.2

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAK  127 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~  127 (239)
                      +.||.+||++||+.+   +|||+|+|+|||||.+.. +||||.  +..+||+|||++|..
T Consensus         9 ~~~t~~Ev~~h~~~~---~~wv~i~g~VYDvT~f~~-~HPGG~~~i~~~aGkDaT~~F~~   64 (104)
T 1hko_A            9 KYYTLEEIQKHNNSK---STWLILHYKVYDLTKFLE-EHPGGEEVLREQAGGDATENFED   64 (104)
T ss_dssp             EEECHHHHHHCBSSS---SBEEEETTEEEEHHHHSS-SSSSCSHHHHTTCSEECHHHHTT
T ss_pred             CccCHHHHHHhcCCC---CEEEEECCEEEECCcchh-hCcChHHHHHHhcCccchHHHHH
Confidence            569999999999975   499999999999999864 899997  468999999999975

>1mj4_A Sulfite oxidase; cytochrome B5, heme, oxidoreductase; HET: HEM; 1.20A {Homo sapiens} SCOP: d.120.1.1

Probab=99.14  E-value=9.9e-12  Score=93.16  Aligned_cols=54  Identities=24%  Similarity=0.394  Sum_probs=44.3

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAK  127 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~  127 (239)
                      +.||.+||++||+.++  +|||+|+|+|||||.+.. +||||.  ...+||+|+ .+|..
T Consensus         5 ~~~t~~ev~~h~~~~~--~~wv~i~g~VYDvt~f~~-~HPGG~~~il~~aG~Dt-~~f~~   60 (82)
T 1mj4_A            5 HIYTKEEVSSHTSPET--GIWVTLGSEVFDVTEFVD-LHPGGPSKLMLAAGGPL-EPFWA   60 (82)
T ss_dssp             CBCCCC-CTTCEETTT--EEEEEETTEEEECTTTGG-GSTTCHHHHHTTTTSBS-HHHHT
T ss_pred             CccCHHHHHHhcCCCC--CeEEEECCEEEEchHHHH-hCCCHhHHHHHHcCCCh-HHHHh
Confidence            4699999999999863  699999999999999864 799994  457999995 56653

>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*

Probab=98.84  E-value=1e-09  Score=105.85  Aligned_cols=55  Identities=24%  Similarity=0.413  Sum_probs=48.6

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKM  128 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~  128 (239)
                      +.||.+||++||+.+   +|||+|+|+|||||.+.. +||||.  ...+||+|||..|...
T Consensus         9 ~~~t~~ev~~h~~~~---~~wv~i~g~VYDvt~f~~-~HPGG~~~i~~~aG~DaT~~f~~~   65 (511)
T 1kbi_A            9 QKISPAEVAKHNKPD---DCWVVINGYVYDLTRFLP-NHPGGQDVIKFNAGKDVTAIFEPL   65 (511)
T ss_dssp             CCBCTTHHHHCEETT---EEEEEETTEEEECTTTGG-GCTTCHHHHHTTTTSBCHHHHGGG
T ss_pred             CccCHHHHHHhCCCC---CEEEEECCEEEECCcchh-hCcChHHHHHHHcCcchhhhhhhc
Confidence            569999999999986   499999999999999864 899997  4589999999999754

>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*

Probab=98.51  E-value=5e-08  Score=93.42  Aligned_cols=54  Identities=22%  Similarity=0.316  Sum_probs=46.4

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCC--cccccCCCchHHHHHh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGG--PYALFAGKDASRALAK  127 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG--~Y~~fAGrDaSr~fa~  127 (239)
                      +.||.+|+++||..++  .|||+|+|+|||||.+.. .||||  ....+||+| |..|..
T Consensus         5 ~~~t~~Ev~~H~~~~d--~~Wvii~g~VYDvT~fl~-~HPGG~~~il~~aG~D-T~~f~~   60 (466)
T 1sox_A            5 PEYTREEVGRHRSPEE--RVWVTHGTDVFDVTDFVE-LHPGGPDKILLAAGGA-LEPFWA   60 (466)
T ss_dssp             CEECHHHHTTCEETTT--EEEEEETTEEEECTTTTT-TSTTCHHHHGGGTTSB-SHHHHH
T ss_pred             CeeCHHHHHHhcCCCC--ceEEEECCEEEechHhHh-hCcCCcccchhhcCCc-cccccc
Confidence            4699999999998753  499999999999999964 68999  367899999 888864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	239
d1t0ga_	109	d.120.1.2 (A:) Putative steroid binding protein AT	1e-41
d1cxya_	81	d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira	3e-05
d1soxa2	91	d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal dom	0.001
d1mj4a_	80	d.120.1.1 (A:) Sulfite oxidase, N-terminal domain	0.001
d1cyoa_	88	d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [Ta	0.001

>d1t0ga_ d.120.1.2 (A:) Putative steroid binding protein AT2G24940 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 109

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Steroid-binding domain
domain: Putative steroid binding protein AT2G24940
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  136 bits (343), Expect = 1e-41
 Identities = 50/98 (51%), Positives = 68/98 (69%)

Query: 68  QLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAK 127
            L E T E+L QY+G+D  KP+ +AIK +++DV+  + FYG GG Y++FAGKDASRAL K
Sbjct: 8   HLEEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGK 67

Query: 128 MSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVG 165
           MS  E+D++  + GL   E+  L DWE KF +KY  VG
Sbjct: 68  MSKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVG 105

>d1cxya_ d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira vacuolata [TaxId: 1054]} Length = 81

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b558
species: Ectothiorhodospira vacuolata [TaxId: 1054]

 Score = 39.1 bits (91), Expect = 3e-05
 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 69  LGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYAL--FAGKDASRALA 126
           L   T E++ ++    S     MAI  ++YD++     + PG    +  + G++++ A  
Sbjct: 2   LPVFTLEQVAEHH---SPDDCWMAIHGKVYDLTPYVPNH-PGPAGMMLVWCGQESTEAWE 57

Query: 127 KMSFEEK 133
             S+ E 
Sbjct: 58  TKSYGEP 64

>d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 91

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Sulfite oxidase, N-terminal domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 35.3 bits (81), Expect = 0.001
 Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 69  LGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGG-PYALFAGKDASRALA 126
             E T EE+ ++   + +  + +   + ++DV+     +  G     L AG       A
Sbjct: 2   YPEYTREEVGRHRSPEER--VWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWA 58

>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 80

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Sulfite oxidase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (80), Expect = 0.001
 Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 72  ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGG-PYALFAGKDASRALA 126
            T+EE+  +   ++   + + + S+++DV++    +  G     L AG       A
Sbjct: 5   YTKEEVSSHTSPETG--IWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWA 58

>d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]} Length = 88

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b5
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 34.8 bits (80), Expect = 0.001
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 6/56 (10%)

Query: 71  EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYAL--FAGKDASRA 124
             T EE+++++ S S     + +  ++YD+++    + PGG   L   AG DA+  
Sbjct: 6   YYTLEEIQKHNNSKS---TWLILHYKVYDLTKFLEEH-PGGEEVLREQAGGDATEN 57

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	239
d1t0ga_	109	Putative steroid binding protein AT2G24940 {Thale	100.0
d1cyoa_	88	Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]}	99.43
d1euea_	86	Cytochrome b5 {Rat (Rattus norvegicus) [TaxId: 101	99.4
d1mj4a_	80	Sulfite oxidase, N-terminal domain {Human (Homo sa	99.4
d1soxa2	91	Sulfite oxidase, N-terminal domain {Chicken (Gallu	99.37
d1cxya_	81	Cytochrome b558 {Ectothiorhodospira vacuolata [Tax	99.31
d1kbia2	97	Flavocytochrome b2, N-terminal domain {Baker's yea	99.22

>d1t0ga_ d.120.1.2 (A:) Putative steroid binding protein AT2G24940 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Steroid-binding domain
domain: Putative steroid binding protein AT2G24940
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.3e-39  Score=256.40  Aligned_cols=101  Identities=50%  Similarity=0.887  Sum_probs=97.5

Q ss_pred             cCCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCcccccCCCchHHHHHhhcCCCcccCCCCCCCCHHHhh
Q 026393           69 LGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELE  148 (239)
Q Consensus        69 ~~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~Y~~fAGrDaSr~fa~~s~d~~dl~~dls~L~~~e~~  148 (239)
                      .+.||++||++|||.++++||||||+|+|||||+++.||||||+|+.||||||||+|++++|+++++++|+++|+++|++
T Consensus         9 ~~~fT~eeL~~ydG~~~~~piyvAi~G~VyDVt~~~~~ygpgg~Y~~faG~D~sral~~~~~~~e~~~~d~~~L~~~e~~   88 (109)
T d1t0ga_           9 LEEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEIN   88 (109)
T ss_dssp             SEEEEHHHHTTCSSCSSSCCCEEEETTEEEECGGGTTTSTTTCTTTTTTTEECHHHHHHTCCCTTTCCSCCTTSCHHHHH
T ss_pred             hhhCCHHHHHHcCCCCCCccEEEEECCEEEEccCCcceECCCCcccccccccHHHHHHhcCCChhhcCCcccCCCHHHHH
Confidence            46799999999999987789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhccCceeEEecc
Q 026393          149 ALQDWEYKFMSKYVKVGSIKS  169 (239)
Q Consensus       149 ~L~~W~~~f~~KYp~VG~Lv~  169 (239)
                      .|++|+++|++|||+||+|+.
T Consensus        89 ~L~~W~~~f~~kY~~VG~LV~  109 (109)
T d1t0ga_          89 TLNDWETKFEAKYPVVGRVVS  109 (109)
T ss_dssp             HHHHHHHHHHTTSCEEEEEEC
T ss_pred             HHHHHHHHHhcCCCEEEEEeC
Confidence            999999999999999999973

>d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b5
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.43  E-value=6.5e-14  Score=104.79  Aligned_cols=55  Identities=25%  Similarity=0.370  Sum_probs=48.0

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKM  128 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~  128 (239)
                      +.||.+||++||..++   |||+|+|+|||||.+.. .||||.  ...+||+|||..|...
T Consensus         5 k~yt~~Ev~~H~~~~d---~Wvii~g~VYDvT~f~~-~HPGG~~~i~~~aG~D~T~~F~~~   61 (88)
T d1cyoa_           5 KYYTLEEIQKHNNSKS---TWLILHYKVYDLTKFLE-EHPGGEEVLREQAGGDATENFEDV   61 (88)
T ss_dssp             CEECHHHHTTCEETTE---EEEEETTEEEECTTTTT-TCTTCSHHHHHHTTSBCHHHHHHT
T ss_pred             ccccHHHHHhhCCCCC---eEEEECCEEEecchhhc-ccCCchHHHHHHcCCchHHHHHHH
Confidence            5699999999998753   99999999999999863 689996  4689999999999753

>d1euea_ d.120.1.1 (A:) Cytochrome b5 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b5
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.40  E-value=1.4e-13  Score=102.47  Aligned_cols=55  Identities=24%  Similarity=0.377  Sum_probs=48.1

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKM  128 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~  128 (239)
                      +.||.+||++||..++   |||+|+|+|||||.+. -.||||.  ...+||+|+|..|...
T Consensus         5 ~~yt~~Ev~~H~~~~d---~Wvii~g~VYDvT~f~-~~HPGG~~~i~~~aG~D~T~~f~~~   61 (86)
T d1euea_           5 TYYRLEEVAKRNTAEE---TWMVIHGRVYDITRFL-SEHPGGEEILLEQAGADATESFEDI   61 (86)
T ss_dssp             CEECHHHHTTCEETTE---EEEEETTEEEECGGGG-GGCTTCSHHHHTTTTSBCHHHHHHH
T ss_pred             CEECHHHHHhhCCCCC---EEEEECCEEEecceee-eccCcchHHHHHHCCcCHHHHHHHh
Confidence            5699999999998764   9999999999999985 3689996  5689999999999764

>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Sulfite oxidase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=5.7e-14  Score=103.05  Aligned_cols=55  Identities=25%  Similarity=0.366  Sum_probs=46.6

Q ss_pred             CCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHh
Q 026393           70 GEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAK  127 (239)
Q Consensus        70 ~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~  127 (239)
                      +.||.+||++||+.++  .|||+|+|+|||||.+. -.||||.  ...+||+|+|..|+.
T Consensus         3 ~v~T~~Ev~~H~~~~~--~~Wiii~g~VYDvT~f~-~~HPGG~~~i~~~~G~D~t~~~~~   59 (80)
T d1mj4a_           3 HIYTKEEVSSHTSPET--GIWVTLGSEVFDVTEFV-DLHPGGPSKLMLAAGGPLEPFWAL   59 (80)
T ss_dssp             CBCCCC-CTTCEETTT--EEEEEETTEEEECTTTG-GGSTTCHHHHHTTTTSBSHHHHTT
T ss_pred             ccccHHHHHHhCCCCC--CeEEEECCEEEeeeeeH-hhcCChhHHHHHHcCCCcchhhhc
Confidence            5799999999998754  49999999999999985 3689995  689999999988864

>d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Sulfite oxidase, N-terminal domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.37  E-value=3e-13  Score=101.43  Aligned_cols=55  Identities=25%  Similarity=0.361  Sum_probs=48.0

Q ss_pred             CCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhh
Q 026393           71 EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKM  128 (239)
Q Consensus        71 ~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~  128 (239)
                      .||.+||++||..++  .|||+|+|+|||||.+.. .||||.  ...++|+|+|..|...
T Consensus         4 ~~T~~Ev~~H~~~~~--~~Wiii~g~VYDvT~f~~-~HPGG~~~i~~~~G~D~t~~~~~~   60 (91)
T d1soxa2           4 EYTREEVGRHRSPEE--RVWVTHGTDVFDVTDFVE-LHPGGPDKILLAAGGALEPFWALY   60 (91)
T ss_dssp             EECHHHHTTCEETTT--EEEEEETTEEEECTTTTT-TSTTCHHHHGGGTTSBSHHHHHHS
T ss_pred             ccCHHHHHHhCCCCC--ceEEEECCEEEeccceec-ccCCcHHHHHHHcCCcccHhHhhc
Confidence            599999999998764  599999999999999963 789995  6899999999988743

>d1cxya_ d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira vacuolata [TaxId: 1054]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Cytochrome b558
species: Ectothiorhodospira vacuolata [TaxId: 1054]

Probab=99.31  E-value=6.9e-13  Score=97.51  Aligned_cols=55  Identities=24%  Similarity=0.400  Sum_probs=47.9

Q ss_pred             CCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhhc
Q 026393           71 EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKMS  129 (239)
Q Consensus        71 ~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~s  129 (239)
                      .||.+||++||..++   |||+|+|+|||||.+.. .||||.  ...+||+|||.+|....
T Consensus         4 ~~t~~ev~~H~~~~d---~Wivi~g~VYDvT~f~~-~HPGG~~~l~~~aGkD~t~~F~~~~   60 (81)
T d1cxya_           4 VFTLEQVAEHHSPDD---CWMAIHGKVYDLTPYVP-NHPGPAGMMLVWCGQESTEAWETKS   60 (81)
T ss_dssp             BCCHHHHTTCEETTE---EEEEETTEEEECTTTGG-GCCSSTTTTGGGTTSBCHHHHHHTT
T ss_pred             ccCHHHHHhhCCCCC---EEEEECCEEEeccceee-cCCCcHHHHHHHcCCcchHHHHhcC
Confidence            599999999998863   99999999999999864 689985  67999999999997543

>d1kbia2 d.120.1.1 (A:1-97) Flavocytochrome b2, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Cytochrome b5
domain: Flavocytochrome b2, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.22  E-value=2.1e-12  Score=98.20  Aligned_cols=56  Identities=23%  Similarity=0.392  Sum_probs=48.5

Q ss_pred             cCCCCHHHHhhhcCCCCCCCEEEEEcCeEEeccCCCcccCCCCc--ccccCCCchHHHHHhh
Q 026393           69 LGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGP--YALFAGKDASRALAKM  128 (239)
Q Consensus        69 ~~~fT~eELa~ydG~~~~~piyvAI~G~VYDVT~~~~fYgPGG~--Y~~fAGrDaSr~fa~~  128 (239)
                      .+.||.+|+++||..++   |||+|+|+|||||.+. ..||||.  ...+||+|||..|...
T Consensus         8 ~~~it~~EV~~H~~~~d---~Wvvi~g~VYDvT~f~-~~HPGG~~~i~~~aG~D~T~~f~~~   65 (97)
T d1kbia2           8 KQKISPAEVAKHNKPDD---CWVVINGYVYDLTRFL-PNHPGGQDVIKFNAGKDVTAIFEPL   65 (97)
T ss_dssp             SCCBCTTHHHHCEETTE---EEEEETTEEEECTTTG-GGCTTCHHHHHTTTTSBCHHHHGGG
T ss_pred             cCccCHHHHHHhCCCCC---EEEEECCEEEecchhh-hhCCChHHHHHHHcCccHHHHHHHH
Confidence            35699999999997753   9999999999999986 4799994  6799999999999743