Citrus Sinensis ID: 026452


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILISL
ccHHHHHHHHHHHHHHHHccHHHHHHHHHHccHHEEEcHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcHHHHccccHHHHHHHHHHHHccHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccccccHHHcccccccHHHHHHc
ccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccccccHHHHHHHHHHHccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEHcccccccccccHHHHHHHHHHHHHccHHHHHHcccHHHHHHccccEEEEEEcc
MGTVVTIAREEGLWALWNGVIAGLHRQCIYgglriglydpvktflvgsdfvgdiPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAegklpsgvprryygalDAYCTIVRQEGLGalwtglgpniaRNAIVNAAELASYDQVKETIlkipgftdnIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLsaknnslaapnisiSLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILISL
MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQaegklpsgvprryYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLkkqpayvrnYEECAYLILISL
MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFlsplllsaknnslaapnISISLYRlttkvccllllkkQPAYVRNYEECAYLILISL
***VVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILI**
MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLV****VGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEG******PRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVG******************ISISLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILISL
MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILISL
MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILISL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
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MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKKQPAYVRNYEECAYLILISL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query238 2.2.26 [Sep-21-2011]
Q9ZWG1305 Mitochondrial uncoupling yes no 0.718 0.560 0.827 5e-84
O81845306 Mitochondrial uncoupling no no 0.714 0.555 0.783 9e-81
O97562309 Mitochondrial uncoupling yes no 0.735 0.566 0.486 2e-42
P70406309 Mitochondrial uncoupling yes no 0.735 0.566 0.475 1e-41
P56501308 Mitochondrial uncoupling no no 0.743 0.574 0.472 2e-41
Q3SZI5309 Mitochondrial uncoupling yes no 0.735 0.566 0.469 2e-41
P56499308 Mitochondrial uncoupling yes no 0.743 0.574 0.472 2e-41
Q9N2I9311 Mitochondrial uncoupling yes no 0.743 0.569 0.472 3e-41
P56500309 Mitochondrial uncoupling no no 0.735 0.566 0.469 4e-41
Q9W720310 Mitochondrial uncoupling yes no 0.903 0.693 0.408 6e-41
>sp|Q9ZWG1|PUMP2_ARATH Mitochondrial uncoupling protein 2 OS=Arabidopsis thaliana GN=PUMP2 PE=2 SV=1 Back     alignment and function desciption
 Score =  310 bits (795), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 149/180 (82%), Positives = 165/180 (91%)

Query: 1   MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 60
           +GT+ TIAREEG+  LW GVIAGLHRQCIYGGLRIGLY+PVKT LVGSDF+GDIPLYQKI
Sbjct: 61  IGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFIGDIPLYQKI 120

Query: 61  FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 120
            AALLTGAIAI+VANPTDLVKVRLQ+EGKLP+GVPRRY GA+DAY TIV+ EG+ ALWTG
Sbjct: 121 LAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEGVSALWTG 180

Query: 121 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 180
           LGPNIARNAIVNAAELASYDQ+KETI+KIP F D++ TH+LAGL AG FAVCIGSPIDVV
Sbjct: 181 LGPNIARNAIVNAAELASYDQIKETIMKIPFFRDSVLTHLLAGLAAGFFAVCIGSPIDVV 240




PUMPS are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation. This leads to a decrease in the efficiency of oxidative phosphorylation and an increase in heat production. May be involved in protecting plant cells against oxidative stress damage.
Arabidopsis thaliana (taxid: 3702)
>sp|O81845|PUMP1_ARATH Mitochondrial uncoupling protein 1 OS=Arabidopsis thaliana GN=PUMP1 PE=1 SV=1 Back     alignment and function description
>sp|O97562|UCP2_PIG Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|P70406|UCP2_MOUSE Mitochondrial uncoupling protein 2 OS=Mus musculus GN=Ucp2 PE=1 SV=1 Back     alignment and function description
>sp|P56501|UCP3_MOUSE Mitochondrial uncoupling protein 3 OS=Mus musculus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|Q3SZI5|UCP2_BOVIN Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|P56499|UCP3_RAT Mitochondrial uncoupling protein 3 OS=Rattus norvegicus GN=Ucp3 PE=2 SV=1 Back     alignment and function description
>sp|Q9N2I9|UCP3_CANFA Mitochondrial uncoupling protein 3 OS=Canis familiaris GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|P56500|UCP2_RAT Mitochondrial uncoupling protein 2 OS=Rattus norvegicus GN=Ucp2 PE=2 SV=1 Back     alignment and function description
>sp|Q9W720|UCP2_DANRE Mitochondrial uncoupling protein 2 OS=Danio rerio GN=ucp2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query238
224059342305 predicted protein [Populus trichocarpa] 0.718 0.560 0.866 1e-85
449450782300 PREDICTED: mitochondrial uncoupling prot 0.710 0.563 0.838 2e-83
225434708303 PREDICTED: mitochondrial uncoupling prot 0.710 0.557 0.827 4e-83
359478882302 PREDICTED: mitochondrial uncoupling prot 0.710 0.559 0.827 4e-83
297796843305 ATUCP2 [Arabidopsis lyrata subsp. lyrata 0.718 0.560 0.833 4e-83
224138994307 predicted protein [Populus trichocarpa] 0.710 0.550 0.811 6e-83
356496148305 PREDICTED: mitochondrial uncoupling prot 0.731 0.570 0.816 1e-82
14599482242 putative mitochondrial uncoupling protei 0.739 0.727 0.816 2e-82
255558838305 mitochondrial uncoupling protein, putati 0.710 0.554 0.838 2e-82
18424178305 uncoupling protein 2 [Arabidopsis thalia 0.718 0.560 0.827 3e-82
>gi|224059342|ref|XP_002299831.1| predicted protein [Populus trichocarpa] gi|222847089|gb|EEE84636.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 156/180 (86%), Positives = 169/180 (93%)

Query: 1   MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 60
           +GTV TIAREEGL ALW G+ AGLHRQ IYGGLRIGLY+PVK+FLVGSDFVGDIPLYQKI
Sbjct: 61  LGTVATIAREEGLAALWKGITAGLHRQFIYGGLRIGLYEPVKSFLVGSDFVGDIPLYQKI 120

Query: 61  FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 120
            AALLTGA+AIV+ANPTDLVKVRLQAEGKLP+GVP RY GALDAY TIVRQEGLGALWTG
Sbjct: 121 LAALLTGAMAIVIANPTDLVKVRLQAEGKLPAGVPGRYAGALDAYFTIVRQEGLGALWTG 180

Query: 121 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 180
           LGPNIARNAI+NAAELASYD+VK+TIL+IPGFTD+ FTH+LAGLGAG FAVCIGSPIDVV
Sbjct: 181 LGPNIARNAIINAAELASYDEVKQTILQIPGFTDSAFTHVLAGLGAGFFAVCIGSPIDVV 240




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450782|ref|XP_004143141.1| PREDICTED: mitochondrial uncoupling protein 2-like [Cucumis sativus] gi|449496627|ref|XP_004160183.1| PREDICTED: mitochondrial uncoupling protein 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225434708|ref|XP_002281053.1| PREDICTED: mitochondrial uncoupling protein 2-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359478882|ref|XP_003632181.1| PREDICTED: mitochondrial uncoupling protein 2-like isoform 2 [Vitis vinifera] gi|297745960|emb|CBI16016.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297796843|ref|XP_002866306.1| ATUCP2 [Arabidopsis lyrata subsp. lyrata] gi|297312141|gb|EFH42565.1| ATUCP2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224138994|ref|XP_002322953.1| predicted protein [Populus trichocarpa] gi|222867583|gb|EEF04714.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356496148|ref|XP_003516932.1| PREDICTED: mitochondrial uncoupling protein 3-like [Glycine max] Back     alignment and taxonomy information
>gi|14599482|gb|AAK70939.1| putative mitochondrial uncoupling protein [Mangifera indica] Back     alignment and taxonomy information
>gi|255558838|ref|XP_002520442.1| mitochondrial uncoupling protein, putative [Ricinus communis] gi|223540284|gb|EEF41855.1| mitochondrial uncoupling protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|18424178|ref|NP_568894.1| uncoupling protein 2 [Arabidopsis thaliana] gi|75315972|sp|Q9ZWG1.1|PUMP2_ARATH RecName: Full=Mitochondrial uncoupling protein 2; Short=AtPUMP2 gi|4063007|dbj|BAA36222.1| uncoupling protein [Arabidopsis thaliana] gi|9759228|dbj|BAB09640.1| uncoupling protein [Arabidopsis thaliana] gi|21593775|gb|AAM65742.1| uncoupling protein AtUCP2 [Arabidopsis thaliana] gi|332009741|gb|AED97124.1| uncoupling protein 2 [Arabidopsis thaliana] gi|385137896|gb|AFI41209.1| uncoupling protein 2, partial [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query238
TAIR|locus:2154593305 UCP2 "uncoupling protein 2" [A 0.756 0.590 0.827 6.2e-78
TAIR|locus:2080300306 PUMP1 "plant uncoupling mitoch 0.756 0.588 0.783 1.5e-74
UNIPROTKB|O97562309 UCP2 "Mitochondrial uncoupling 0.735 0.566 0.486 1.6e-40
MGI|MGI:109354309 Ucp2 "uncoupling protein 2 (mi 0.735 0.566 0.475 6.8e-40
RGD|3932309 Ucp2 "uncoupling protein 2 (mi 0.735 0.566 0.469 1.8e-39
UNIPROTKB|F1PWF8309 UCP2 "Mitochondrial uncoupling 0.735 0.566 0.475 1.8e-39
UNIPROTKB|Q3SZI5309 UCP2 "Mitochondrial uncoupling 0.735 0.566 0.469 2.3e-39
MGI|MGI:1099787308 Ucp3 "uncoupling protein 3 (mi 0.743 0.574 0.472 2.9e-39
RGD|3933308 Ucp3 "uncoupling protein 3 (mi 0.743 0.574 0.472 4.8e-39
UNIPROTKB|P55851309 UCP2 "Mitochondrial uncoupling 0.735 0.566 0.469 9.9e-39
TAIR|locus:2154593 UCP2 "uncoupling protein 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
 Identities = 149/180 (82%), Positives = 165/180 (91%)

Query:     1 MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 60
             +GT+ TIAREEG+  LW GVIAGLHRQCIYGGLRIGLY+PVKT LVGSDF+GDIPLYQKI
Sbjct:    61 IGTLATIAREEGISGLWKGVIAGLHRQCIYGGLRIGLYEPVKTLLVGSDFIGDIPLYQKI 120

Query:    61 FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 120
              AALLTGAIAI+VANPTDLVKVRLQ+EGKLP+GVPRRY GA+DAY TIV+ EG+ ALWTG
Sbjct:   121 LAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVKLEGVSALWTG 180

Query:   121 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 180
             LGPNIARNAIVNAAELASYDQ+KETI+KIP F D++ TH+LAGL AG FAVCIGSPIDVV
Sbjct:   181 LGPNIARNAIVNAAELASYDQIKETIMKIPFFRDSVLTHLLAGLAAGFFAVCIGSPIDVV 240


GO:0005739 "mitochondrion" evidence=ISM
GO:0006839 "mitochondrial transport" evidence=IEA
GO:0017077 "oxidative phosphorylation uncoupler activity" evidence=ISS
GO:0031966 "mitochondrial membrane" evidence=IEA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006007 "glucose catabolic process" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2080300 PUMP1 "plant uncoupling mitochondrial protein 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|O97562 UCP2 "Mitochondrial uncoupling protein 2" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:109354 Ucp2 "uncoupling protein 2 (mitochondrial, proton carrier)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3932 Ucp2 "uncoupling protein 2 (mitochondrial, proton carrier)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PWF8 UCP2 "Mitochondrial uncoupling protein 2" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZI5 UCP2 "Mitochondrial uncoupling protein 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1099787 Ucp3 "uncoupling protein 3 (mitochondrial, proton carrier)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3933 Ucp3 "uncoupling protein 3 (mitochondrial, proton carrier)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P55851 UCP2 "Mitochondrial uncoupling protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZWG1PUMP2_ARATHNo assigned EC number0.82770.71840.5606yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query238
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-24
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 9e-08
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-05
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 91.9 bits (229), Expect = 4e-24
 Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 52  GDIPLYQKIFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQ 111
             +     + A  + GAIA  V  P D+VK RLQ      +G  R+Y G LD +  I ++
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQ---SSAAGGSRKYKGILDCFKKIYKE 57

Query: 112 EGLGALWTGLGPNIARNAIVNAAELASYDQVKETILK 148
           EG+  L+ GL PN+ R A   A    +Y+ +K+ +LK
Sbjct: 58  EGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 238
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0764 299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.98
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.98
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.98
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.97
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.97
KOG0757 319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.97
KOG0752320 consensus Mitochondrial solute carrier protein [En 99.97
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.97
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.96
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 99.96
KOG0760 302 consensus Mitochondrial carrier protein MRS3/4 [En 99.96
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.96
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.95
PTZ00168259 mitochondrial carrier protein; Provisional 99.95
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.95
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.94
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.94
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 99.93
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.92
KOG0765333 consensus Predicted mitochondrial carrier protein 99.92
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.91
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.9
KOG0766297 consensus Predicted mitochondrial carrier protein 99.9
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.89
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.89
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.89
KOG0036463 consensus Predicted mitochondrial carrier protein 99.88
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.85
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.85
KOG1519297 consensus Predicted mitochondrial carrier protein 99.83
KOG2745321 consensus Mitochondrial carrier protein [General f 99.81
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.8
KOG2745 321 consensus Mitochondrial carrier protein [General f 99.46
KOG1519297 consensus Predicted mitochondrial carrier protein 99.35
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.34
KOG2954427 consensus Mitochondrial carrier protein [General f 99.22
KOG2954427 consensus Mitochondrial carrier protein [General f 98.69
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=1.1e-48  Score=311.83  Aligned_cols=228  Identities=28%  Similarity=0.402  Sum_probs=202.3

Q ss_pred             hHHHHHHHhhcHHHHhhchHHHHHHHHhhhhhhhhchHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHHHHhcCcHHHHH
Q 026452            2 GTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVK   81 (238)
Q Consensus         2 ~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~~~Pld~vk   81 (238)
                      +.+++|+++||++|||||+.+++++.+|+.+++|.+||..++.....++....+...+++||++||.+++++++|+|++|
T Consensus        72 ~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~avqf~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvR  151 (320)
T KOG0752|consen   72 QAFKSIYREEGLRGFWKGNGPAQIRIIPYGAVQFSAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLR  151 (320)
T ss_pred             HHHHHHHHHhchhhhhcCcccceeeeeecchhhhhHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhh
Confidence            67999999999999999999999999999999999999999855444443477889999999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCCcccCHHHHHHHHHHhhchhhhhcchhHHHHHHHHHHhhHHHHHHHHHH-HHHcCCC-CCChhHHH
Q 026452           82 VRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKE-TILKIPG-FTDNIFTH  159 (238)
Q Consensus        82 ~~~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~~y~G~~~~l~~~~~~~~~~~~~y~~~~~-~~~~~~~-~~~~~~~~  159 (238)
                      +|+-++.+     ...|+++.+++++|+++||++|||||+.|++++.+|+.++.|..||.+++ .+.+..+ ++.+.+..
T Consensus       152 tRLa~q~~-----~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~  226 (320)
T KOG0752|consen  152 TRLAVQGE-----LKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFER  226 (320)
T ss_pred             hheeeecc-----cccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHH
Confidence            99999865     22699999999999999999999999999999999999999999999999 5554433 34578899


Q ss_pred             HHHHHHHHHHHHhhcchhhHHHhhhhccccc-cCCCCCCCchhHHHHHhhccccchhhhcc-cch----------hHhhH
Q 026452          160 ILAGLGAGLFAVCIGSPIDVVGFLSPLLLSA-KNNSLAAPNISISLYRLTTKVCCLLLLKK-QPA----------YVRNY  227 (238)
Q Consensus       160 ~~~~~~a~~~~~~~~~P~d~vk~r~q~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~g-~~~----------~~~~y  227 (238)
                      +++|++||+++.+++||+|+||+|||+++.. ......+++.++++.++.+.||..++|+| .|.          .|++|
T Consensus       227 l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Y  306 (320)
T KOG0752|consen  227 LLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTY  306 (320)
T ss_pred             HHHHHHHHHHHhhhcccHHHHHHHHhccCccccccccccccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehH
Confidence            9999999999999999999999999998764 22333457899999999999999999999 666          89999


Q ss_pred             HHhhhhh
Q 026452          228 EECAYLI  234 (238)
Q Consensus       228 e~~k~~~  234 (238)
                      |.+|.++
T Consensus       307 e~~k~~l  313 (320)
T KOG0752|consen  307 EILKDLL  313 (320)
T ss_pred             HHHHHHh
Confidence            9999665



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query238
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-42
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 3e-05
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 169 bits (428), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 6/181 (3%) Query: 1 MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLV-GSDFVGDIPLYQK 59 +GT++T+ R EG +L+NG++AGL RQ + +RIGLYD VK F GS+ G + + Sbjct: 51 LGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAG---IGSR 107 Query: 60 IFAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWT 119 + A TGA+A+ VA PTD+VKVR QA+ + G RRY ++AY TI R+EG+ LW Sbjct: 108 LLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGG--RRYQSTVEAYKTIAREEGIRGLWK 165 Query: 120 GLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDV 179 G PN+ARNAIVN AEL +YD +K+T+LK TD++ H + GAG I SP+DV Sbjct: 166 GTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDV 225 Query: 180 V 180 V Sbjct: 226 V 226
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query238
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-76
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-30
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-27
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-23
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-23
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 8e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  232 bits (594), Expect = 2e-76
 Identities = 82/180 (45%), Positives = 113/180 (62%), Gaps = 4/180 (2%)

Query: 1   MGTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKI 60
           +GT++T+ R EG  +L+NG++AGL RQ  +  +RIGLYD VK F           +  ++
Sbjct: 51  LGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS--EHAGIGSRL 108

Query: 61  FAALLTGAIAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTG 120
            A   TGA+A+ VA PTD+VKVR QA+ +      RRY   ++AY TI R+EG+  LW G
Sbjct: 109 LAGSTTGALAVAVAQPTDVVKVRFQAQARAGG--GRRYQSTVEAYKTIAREEGIRGLWKG 166

Query: 121 LGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHILAGLGAGLFAVCIGSPIDVV 180
             PN+ARNAIVN AEL +YD +K+T+LK    TD++  H  +  GAG     I SP+DVV
Sbjct: 167 TSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVV 226


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query238
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 99.98
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=1.7e-45  Score=300.90  Aligned_cols=224  Identities=39%  Similarity=0.601  Sum_probs=200.1

Q ss_pred             hHHHHHHHhhcHHHHhhchHHHHHHHHhhhhhhhhchHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHHHHhcCcHHHHH
Q 026452            2 GTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGAIAIVVANPTDLVK   81 (238)
Q Consensus         2 ~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~~~Pld~vk   81 (238)
                      +++++|+++||++|||||+.+++++.+|.++++|.+||.+++.+.+..+  ..+....+++|++||+++.++++|+|+||
T Consensus        52 ~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~~~~--~~~~~~~~~ag~~ag~~~~~~~~Pld~vk  129 (303)
T 2lck_A           52 GTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSE--HAGIGSRLLAGSTTGALAVAVAQPTDVVK  129 (303)
T ss_dssp             HHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSCCCS--SCCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred             HHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--CCcHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence            6899999999999999999999999999999999999999999864322  46788999999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCCcccCHHHHHHHHHHhhchhhhhcchhHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCCChhHHHHH
Q 026452           82 VRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFTHIL  161 (238)
Q Consensus        82 ~~~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~~y~G~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~  161 (238)
                      +|+|++...  .....|.+.++++++|+++||+++||||+.+++++.+|..+++|.+||.+++.+.+.....++...+++
T Consensus       130 trlq~~~~~--~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~~~~~  207 (303)
T 2lck_A          130 VRFQAQARA--GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFT  207 (303)
T ss_dssp             HHHHHSCSC--CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHHHHHH
T ss_pred             HHHhccccc--CCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHH
Confidence            999998642  233478999999999999999999999999999999999999999999999988766544567788999


Q ss_pred             HHHHHHHHHHhhcchhhHHHhhhhccccccCCCCCCCchhHHHHHhhccccchhhhcc-cch----------hHhhHHHh
Q 026452          162 AGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKK-QPA----------YVRNYEEC  230 (238)
Q Consensus       162 ~~~~a~~~~~~~~~P~d~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g-~~~----------~~~~ye~~  230 (238)
                      +|++||++++++++|+|+||+|||++..     ..|++.++++.++.+++|+.++|+| .|.          +|..||.+
T Consensus       208 ~g~~ag~~~~~~~~P~dvvktrlq~~~~-----~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~  282 (303)
T 2lck_A          208 SAFGAGFCTTVIASPVDVVKTRYMNSAL-----GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQL  282 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCS-----SSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCHHHHHHHHHHhccc-----cccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHH
Confidence            9999999999999999999999998643     2477899999999999999999999 554          78899999


Q ss_pred             hhhh
Q 026452          231 AYLI  234 (238)
Q Consensus       231 k~~~  234 (238)
                      |..+
T Consensus       283 k~~l  286 (303)
T 2lck_A          283 KRAL  286 (303)
T ss_dssp             HSCC
T ss_pred             HHHH
Confidence            8764



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 238
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-12
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-10
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 62.8 bits (151), Expect = 3e-12
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 5/134 (3%)

Query: 9   REEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGDIPLYQKIFAALLTGA 68
           + +GL  L+ G    +    IY     G+YD  K  L     V  I        A    A
Sbjct: 164 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIV---SWMIAQTVTA 220

Query: 69  IAIVVANPTDLVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARN 128
           +A +V+ P D V+ R+  +     G    Y G +D +  I + EG  A + G   N+ R 
Sbjct: 221 VAGLVSYPFDTVRRRMMMQSGRK-GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR- 278

Query: 129 AIVNAAELASYDQV 142
            +  A  L  YD++
Sbjct: 279 GMGGAFVLVLYDEI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query238
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=3e-39  Score=260.68  Aligned_cols=218  Identities=18%  Similarity=0.234  Sum_probs=191.8

Q ss_pred             hHHHHHHHhhcHHHHhhchHHHHHHHHhhhhhhhhchHHHHHhhccCCCCCC---CcHHHHHHHHHHHHHHHHHhcCcHH
Q 026452            2 GTVVTIAREEGLWALWNGVIAGLHRQCIYGGLRIGLYDPVKTFLVGSDFVGD---IPLYQKIFAALLTGAIAIVVANPTD   78 (238)
Q Consensus         2 ~~~~~i~~~eG~~glyrG~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~ag~~~~~~~~Pld   78 (238)
                      +++++|+++||+++||||+.+.++...+.+.++|.+||.+++.+.+.....+   ......+.+|.+|++++.++++|+|
T Consensus        54 ~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~  133 (292)
T d1okca_          54 DCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLD  133 (292)
T ss_dssp             HHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhh
Confidence            6789999999999999999999999999999999999999999865443322   2345678899999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCcccCHHHHHHHHHHhhchhhhhcchhHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCCChhHH
Q 026452           79 LVKVRLQAEGKLPSGVPRRYYGALDAYCTIVRQEGLGALWTGLGPNIARNAIVNAAELASYDQVKETILKIPGFTDNIFT  158 (238)
Q Consensus        79 ~vk~~~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~~y~G~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~  158 (238)
                      ++|+|+|.+... ....+.+.+..+++++++++||+++||+|+.+++++.+++.+++|..||.+++.+.+.  ...+...
T Consensus       134 ~ik~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~  210 (292)
T d1okca_         134 FARTRLAADVGK-GAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--KNVHIIV  210 (292)
T ss_dssp             HHHHHHHHCCCS-STTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG--GCSCHHH
T ss_pred             hhheeeeccccc-cccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc--cccchHH
Confidence            999999998753 3334578899999999999999999999999999999999999999999999876543  3356788


Q ss_pred             HHHHHHHHHHHHHhhcchhhHHHhhhhccccccCCCCCCCchhHHHHHhhccccchhhhcc-cch
Q 026452          159 HILAGLGAGLFAVCIGSPIDVVGFLSPLLLSAKNNSLAAPNISISLYRLTTKVCCLLLLKK-QPA  222 (238)
Q Consensus       159 ~~~~~~~a~~~~~~~~~P~d~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g-~~~  222 (238)
                      .+++++++++++++++||+||||+|||.+.........|.+.++.+.+.+++||+.++|+| .|.
T Consensus       211 ~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~  275 (292)
T d1okca_         211 SWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSN  275 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHH
T ss_pred             HHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHH
Confidence            8999999999999999999999999999877666667788999999999999999999999 544



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure