Citrus Sinensis ID: 026625
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 235 | 2.2.26 [Sep-21-2011] | |||||||
| C6TBN2 | 346 | Probable aldo-keto reduct | no | no | 0.974 | 0.661 | 0.777 | 1e-106 | |
| Q3L181 | 337 | Perakine reductase OS=Rau | N/A | no | 0.965 | 0.673 | 0.741 | 5e-97 | |
| Q84M96 | 346 | Probable aldo-keto reduct | yes | no | 0.961 | 0.653 | 0.638 | 1e-81 | |
| Q93ZN2 | 345 | Probable aldo-keto reduct | no | no | 0.953 | 0.649 | 0.654 | 9e-81 | |
| O22707 | 345 | Probable aldo-keto reduct | no | no | 0.978 | 0.666 | 0.641 | 2e-80 | |
| F4HPY8 | 330 | Probable aldo-keto reduct | no | no | 0.931 | 0.663 | 0.645 | 2e-79 | |
| P40691 | 307 | Auxin-induced protein PCN | N/A | no | 0.902 | 0.690 | 0.671 | 3e-79 | |
| Q7XT99 | 351 | Probable aldo-keto reduct | no | no | 0.948 | 0.635 | 0.643 | 2e-78 | |
| A2XRZ0 | 351 | Probable aldo-keto reduct | N/A | no | 0.948 | 0.635 | 0.643 | 2e-78 | |
| Q9ASZ9 | 345 | Probable aldo-keto reduct | no | no | 0.931 | 0.634 | 0.647 | 3e-78 |
| >sp|C6TBN2|AKR1_SOYBN Probable aldo-keto reductase 1 OS=Glycine max GN=AKR1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 178/229 (77%), Positives = 201/229 (87%)
Query: 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKY 65
+ Q+ VKLGTQG EVSKLG+GCM L+G YN PL E+DGIS+IK+AFSKGITFFDTAD Y
Sbjct: 3 QAQIQPVKLGTQGFEVSKLGFGCMGLTGAYNDPLQEQDGISVIKYAFSKGITFFDTADVY 62
Query: 66 GPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVE 125
G NE+L+GKALK+LPRE IQ+ATKFG GF + ++G+PEYVRSCCE L+RLDVE
Sbjct: 63 GANANELLVGKALKQLPREKIQIATKFGIASRGFPDMKIEGSPEYVRSCCETGLKRLDVE 122
Query: 126 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185
YIDLYYQHRVDTSVPIEET+GE+KKLVEEGK+KYIGLSEASPDTIRRAHA+HPITAVQ+E
Sbjct: 123 YIDLYYQHRVDTSVPIEETVGELKKLVEEGKVKYIGLSEASPDTIRRAHAIHPITAVQIE 182
Query: 186 WSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFL 234
WSLW RDIE EIVPLCRELGIGIVPY PLGRGFFGGK VVE+VP +S L
Sbjct: 183 WSLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKGVVENVPTNSSL 231
|
May interfere with the nodulation process and inhibits nodule development. Glycine max (taxid: 3847) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q3L181|PERR_RAUSE Perakine reductase OS=Rauvolfia serpentina GN=PR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 353 bits (906), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 169/228 (74%), Positives = 198/228 (86%), Gaps = 1/228 (0%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
+PRVKLGTQGLEVSKLG+GCM LSG YN L EE GI++IK AF+ GITFFDT+D YG
Sbjct: 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGEN 60
Query: 69 -TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
+NE LLGKALK+LPRE IQV TKFG E+GF+ V KGTP+YVRSCCEASL+RLDV+YI
Sbjct: 61 GSNEELLGKALKQLPREKIQVGTKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLDVDYI 120
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DL+Y HR+DT+VPIE T+GE+KKLVEEGKIKY+GLSEASPDTIRRAHAVHP+TA+Q+E+S
Sbjct: 121 DLFYIHRIDTTVPIEITMGELKKLVEEGKIKYVGLSEASPDTIRRAHAVHPVTALQIEYS 180
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
LW RDIE+EIVPLCR+LGIGIVPY P+GRG F GKA+ ES+P +S L
Sbjct: 181 LWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFAGKAIKESLPENSVLT 228
|
Aldo-keto reductase involved in the biosynthesis of monoterpenoid indole alkaloids. Broad substrate specificity enzyme with a high selectivity in the group of alkaloids. Can use perakine, 19(S),20(R)-dihydro-peraksine-17,21-al, cinnamic aldehyde, p-coumaric aldehyde and 3-(3,4,5-trimethoxyphenyl)propanal as substrates, but not ketosteroids such as progesterone. NADPH could not be replaced by NADH. Rauvolfia serpentina (taxid: 4060) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 1 EC: 7 |
| >sp|Q84M96|ALKR2_ARATH Probable aldo-keto reductase 2 OS=Arabidopsis thaliana GN=AGD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 302 bits (774), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/227 (63%), Positives = 178/227 (78%), Gaps = 1/227 (0%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+V R+KLG+QGLEVS G GCM+LS Y +P E D I+++ HA + G+TFFDT+D YGP
Sbjct: 6 RVRRMKLGSQGLEVSAQGLGCMALSARYGAPKPETDAIALLHHAINSGVTFFDTSDMYGP 65
Query: 68 YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
TNE+LLGKALK+ +E +++ATKFGF + V+G PEYVR+ CEASL+RLD+ I
Sbjct: 66 ETNELLLGKALKDGVKEKVELATKFGFFIVEGEISEVRGDPEYVRAACEASLKRLDIACI 125
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DLYYQHR+DT VPIE T+ E+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWS
Sbjct: 126 DLYYQHRIDTRVPIEITMRELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWS 185
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFF-GGKAVVESVPLDSF 233
LW+RD E +I+P+CRELGIGIV Y PLGRGF G + E++ D F
Sbjct: 186 LWSRDAEEDIIPICRELGIGIVAYSPLGRGFLAAGPKLAENLENDDF 232
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q93ZN2|ALKR4_ARATH Probable aldo-keto reductase 4 OS=Arabidopsis thaliana GN=At1g60710 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 299 bits (766), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 148/226 (65%), Positives = 174/226 (76%), Gaps = 2/226 (0%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+KLG+QGLEVS G GCM LS Y +P E + I++I HA G+T DT+D YGP
Sbjct: 7 VRRMKLGSQGLEVSAQGLGCMGLSAFYGAPKPENEAIALIHHAIHSGVTLLDTSDIYGPE 66
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
TNE+LLGKALK+ RE +++ATKFG + V+G PEYVR+ CEASL+RLD+ ID
Sbjct: 67 TNEVLLGKALKDGVREKVELATKFG-ISYAEGKREVRGDPEYVRAACEASLKRLDIACID 125
Query: 129 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
LYYQHRVDT VPIE T+GE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWSL
Sbjct: 126 LYYQHRVDTRVPIEITMGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWSL 185
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESVPLDSF 233
W RD+E EI+P CRELGIGIV Y PLGRGFF G +VE++ D F
Sbjct: 186 WTRDVEEEIIPTCRELGIGIVAYSPLGRGFFASGPKLVENLEKDDF 231
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|O22707|ALKR3_ARATH Probable aldo-keto reductase 3 OS=Arabidopsis thaliana GN=At1g60690 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 298 bits (764), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/234 (64%), Positives = 178/234 (76%), Gaps = 4/234 (1%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE +V R+KLG+QGLEVS G GCM L+G Y + E + I++I HA G+TF D
Sbjct: 1 MAES--CRVRRIKLGSQGLEVSAQGLGCMGLTGHYGASKPETEAIALIHHAIHSGVTFLD 58
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
T+D YGP TNEILLGKALK+ RE +++ATKFG + + +KG P YVR+ CEASL+
Sbjct: 59 TSDMYGPETNEILLGKALKDGVREKVELATKFG-ISYAEGNREIKGDPAYVRAACEASLK 117
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RLDV IDLYYQHR+DT VPIE T+GE+KKL+EEGKIKYIGLSEAS TIRRAH VHPIT
Sbjct: 118 RLDVTCIDLYYQHRIDTRVPIEITMGELKKLIEEGKIKYIGLSEASASTIRRAHTVHPIT 177
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESVPLDSF 233
AVQLEWSLW RD+E EIVP CRELGIGIV Y PLGRGFF G +VE++ + F
Sbjct: 178 AVQLEWSLWTRDVEEEIVPTCRELGIGIVSYSPLGRGFFASGPKLVENLDNNDF 231
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|F4HPY8|AKR6_ARATH Probable aldo-keto reductase 6 OS=Arabidopsis thaliana GN=At1g60750 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 295 bits (754), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/220 (64%), Positives = 172/220 (78%), Gaps = 1/220 (0%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE+ QV R+KLG+QGLEVS G GCM LS Y +P E + +++++HA + G+TF D
Sbjct: 1 MAEEA-CQVRRMKLGSQGLEVSAQGLGCMGLSDFYGAPTPETNAVALLRHAINAGVTFLD 59
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
T+D YGP TNE+LLGKALK+ R+ +++ATKFG +G PEYVR CEASL+
Sbjct: 60 TSDIYGPETNELLLGKALKDGLRDKVELATKFGITASEDGKFGFRGDPEYVRIACEASLK 119
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RL V IDLYYQHR+DT++PIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPIT
Sbjct: 120 RLGVTCIDLYYQHRIDTTLPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPIT 179
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220
AVQ+EWSLW+RD+E +I+P CRELGIGIV Y PLGRGF G
Sbjct: 180 AVQIEWSLWSRDVEEDIIPTCRELGIGIVAYSPLGRGFLG 219
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P40691|A115_TOBAC Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 295 bits (754), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 166/216 (76%), Gaps = 4/216 (1%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+VPR+KLG+QGLEVS G GCM +S Y P E D I +I HA + GIT DT+D YGP
Sbjct: 7 KVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGP 66
Query: 68 YTNEILLGKALKELPRENIQVATKFGFV----ELGFTSVIVKGTPEYVRSCCEASLRRLD 123
+TNEILLGKALK RE + +ATKFG V + V G P YVR+ CEASL+RLD
Sbjct: 67 HTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLD 126
Query: 124 VEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQ 183
++ IDLYYQHRVDT VPIE T+GE+KKLVEEGK+KYIGLSEAS TIRRAHAVHPITAVQ
Sbjct: 127 IDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQ 186
Query: 184 LEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219
LEWSLW+RD+E EI+P CRELGIGIV Y PLGRGF
Sbjct: 187 LEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFL 222
|
Nicotiana tabacum (taxid: 4097) |
| >sp|Q7XT99|AKR2_ORYSJ Probable aldo-keto reductase 2 OS=Oryza sativa subsp. japonica GN=Os04g0338000 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 291 bits (745), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/227 (64%), Positives = 172/227 (75%), Gaps = 4/227 (1%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+KLG+QGLEVS G GCM +S Y P E D +++I HA + G+T DT+D YGP+
Sbjct: 11 VRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMVALIHHAVAAGVTLLDTSDIYGPH 70
Query: 69 TNEILLGKALKELPRENIQVATKFGFV-ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
TNE+LLGKAL+ R+ +++ATKFG E G V +G P YVR+ CE SLRRL V+ I
Sbjct: 71 TNELLLGKALQGGVRDKVELATKFGIAFEDGKRDV--RGDPAYVRAACEGSLRRLGVDSI 128
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DLYYQHRVD VPIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQLEWS
Sbjct: 129 DLYYQHRVDKKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWS 188
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFF-GGKAVVESVPLDSF 233
LW+RD+E +I+P CRELGIGIV Y PLGRGFF G +VES+ F
Sbjct: 189 LWSRDVEEDIIPTCRELGIGIVAYSPLGRGFFSAGAKLVESLSDQDF 235
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|A2XRZ0|AKR2_ORYSI Probable aldo-keto reductase 2 OS=Oryza sativa subsp. indica GN=OsI_15387 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 291 bits (745), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/227 (64%), Positives = 172/227 (75%), Gaps = 4/227 (1%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+KLG+QGLEVS G GCM +S Y P E D +++I HA + G+T DT+D YGP+
Sbjct: 11 VRRMKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMVALIHHAVAAGVTLLDTSDIYGPH 70
Query: 69 TNEILLGKALKELPRENIQVATKFGFV-ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
TNE+LLGKAL+ R+ +++ATKFG E G V +G P YVR+ CE SLRRL V+ I
Sbjct: 71 TNELLLGKALQGGVRDKVELATKFGIAFEDGKRGV--RGDPAYVRAACEGSLRRLGVDSI 128
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DLYYQHRVD VPIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQLEWS
Sbjct: 129 DLYYQHRVDKKVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWS 188
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFF-GGKAVVESVPLDSF 233
LW+RD+E +I+P CRELGIGIV Y PLGRGFF G +VES+ F
Sbjct: 189 LWSRDVEEDIIPTCRELGIGIVAYSPLGRGFFSAGAKLVESLSDQDF 235
|
Oryza sativa subsp. indica (taxid: 39946) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9ASZ9|ALKR5_ARATH Probable aldo-keto reductase 5 OS=Arabidopsis thaliana GN=At1g60730 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 291 bits (745), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/221 (64%), Positives = 171/221 (77%), Gaps = 2/221 (0%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+KLG+QGLEVS G GCM LS Y +P E + I++I HA G+TF DT+D YGP
Sbjct: 7 VRRIKLGSQGLEVSAQGLGCMGLSAFYGTPKPETEAIALIHHAIHSGVTFLDTSDIYGPE 66
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
TNE+LL KALK+ RE +++ATK+G + V KG P YVR+ CEASL R+DV ID
Sbjct: 67 TNELLLSKALKDGVREKVELATKYG-IRYAEGKVEFKGDPAYVRAACEASLMRVDVACID 125
Query: 129 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
LYYQHR+DT VPIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITA+Q+EWSL
Sbjct: 126 LYYQHRIDTRVPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITALQIEWSL 185
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESV 228
W+RD+E +I+P CRELGIGIV Y PLGRGFF G +VE++
Sbjct: 186 WSRDVEEDIIPTCRELGIGIVAYSPLGRGFFASGPKLVENL 226
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 235 | ||||||
| 356571605 | 345 | PREDICTED: LOW QUALITY PROTEIN: auxin-in | 0.982 | 0.669 | 0.779 | 1e-106 | |
| 449445274 | 347 | PREDICTED: probable aldo-keto reductase | 0.995 | 0.674 | 0.761 | 1e-105 | |
| 255542314 | 343 | aldo/keto reductase, putative [Ricinus c | 0.995 | 0.682 | 0.761 | 1e-104 | |
| 225451316 | 347 | PREDICTED: auxin-induced protein PCNT115 | 0.987 | 0.668 | 0.774 | 1e-104 | |
| 224125632 | 348 | predicted protein [Populus trichocarpa] | 0.995 | 0.672 | 0.754 | 1e-104 | |
| 356573095 | 346 | PREDICTED: LOW QUALITY PROTEIN: auxin-in | 0.982 | 0.667 | 0.780 | 1e-104 | |
| 378548275 | 346 | RecName: Full=Probable aldo-keto reducta | 0.974 | 0.661 | 0.777 | 1e-104 | |
| 356505965 | 351 | PREDICTED: auxin-induced protein PCNT115 | 1.0 | 0.669 | 0.762 | 1e-103 | |
| 116781851 | 339 | unknown [Picea sitchensis] | 0.961 | 0.666 | 0.810 | 1e-103 | |
| 225451312 | 342 | PREDICTED: auxin-induced protein PCNT115 | 0.965 | 0.663 | 0.780 | 1e-103 |
| >gi|356571605|ref|XP_003553967.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein PCNT115-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/231 (77%), Positives = 208/231 (90%)
Query: 5 KKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADK 64
+ +Q+PRVKLGTQGLEVSKLGYGCM L+G YN PL EE+GIS+IKHAFSKGITFFDT+D
Sbjct: 3 QSVQMPRVKLGTQGLEVSKLGYGCMGLTGAYNDPLPEEEGISVIKHAFSKGITFFDTSDM 62
Query: 65 YGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDV 124
YGP+ NEI+LGKA+K+LPRE IQ+ATKFG ++ + ++VKGTPEY RSCCEASL+RL V
Sbjct: 63 YGPHANEIVLGKAIKQLPREKIQIATKFGITKIDSSGMVVKGTPEYARSCCEASLKRLGV 122
Query: 125 EYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184
EYIDLYYQHRVD SVPIEETIGE+KKLVEEGK++YIGLSEASPDTIRRAHAVHPITAVQ+
Sbjct: 123 EYIDLYYQHRVDLSVPIEETIGELKKLVEEGKVRYIGLSEASPDTIRRAHAVHPITAVQM 182
Query: 185 EWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
EWSLW RDIE+EI+PLC+ELGIGIVPY PLGRGFFGGK V+E+V S L+
Sbjct: 183 EWSLWTRDIEDEIIPLCKELGIGIVPYSPLGRGFFGGKGVLETVSTVSSLI 233
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445274|ref|XP_004140398.1| PREDICTED: probable aldo-keto reductase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/235 (76%), Positives = 210/235 (89%), Gaps = 1/235 (0%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE + +Q+PRV+LG+QGLEVSKLG+GCM L+G YNS LS+EDGISI+K AF++GITFFD
Sbjct: 1 MAEGQGVQIPRVQLGSQGLEVSKLGFGCMGLTGVYNSCLSDEDGISILKEAFNRGITFFD 60
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
TAD YGP++NEIL+GKALK LPRE +Q+ATKFG +G +S+ V GTPEYVRSCCEASL+
Sbjct: 61 TADVYGPHSNEILVGKALKRLPREKVQIATKFGITRIG-SSMTVNGTPEYVRSCCEASLK 119
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RLD++YIDLYYQHR DTS IEET+GE+KKLVEEGKIKYIGLSEASPDTI+RAHA+HPIT
Sbjct: 120 RLDIDYIDLYYQHRTDTSTSIEETMGELKKLVEEGKIKYIGLSEASPDTIKRAHAIHPIT 179
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
A+Q+EWS+W RDIE EIVPLCRELGIGIVPY PLGRGFF GKAVVES+P+ S L
Sbjct: 180 ALQMEWSVWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFAGKAVVESLPVGSHLA 234
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542314|ref|XP_002512220.1| aldo/keto reductase, putative [Ricinus communis] gi|223548181|gb|EEF49672.1| aldo/keto reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/235 (76%), Positives = 208/235 (88%), Gaps = 1/235 (0%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MA++ Q+PR KLG+QGLEVSKLG+GCM L+G YNSPLS+EDGISI++HAF KGITFFD
Sbjct: 1 MAQEN-FQIPRTKLGSQGLEVSKLGFGCMGLTGVYNSPLSDEDGISILRHAFDKGITFFD 59
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
T+D YGP+TNEIL+GKALK+LPRE +Q+ATKFG V++ +IV G PEYVRS CEASL+
Sbjct: 60 TSDVYGPHTNEILVGKALKQLPREKVQLATKFGIVKMPPPKMIVNGIPEYVRSSCEASLK 119
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RL ++YIDLYYQHRVDTSVPIEET+ E+KKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT
Sbjct: 120 RLGIDYIDLYYQHRVDTSVPIEETMSELKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 179
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
A+Q+EWSLW RD+E EIVPLC+ELGIGIVPY PLGRGFF GK VVE +P +S LV
Sbjct: 180 ALQIEWSLWTRDVEEEIVPLCKELGIGIVPYSPLGRGFFAGKGVVERLPANSMLV 234
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451316|ref|XP_002278850.1| PREDICTED: auxin-induced protein PCNT115 isoform 1 [Vitis vinifera] gi|298204869|emb|CBI34176.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/239 (77%), Positives = 210/239 (87%), Gaps = 7/239 (2%)
Query: 1 MAEDKKL--QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITF 58
MAE++++ Q+PRVKLG QGLEVSKLG+GCM LSG YN+P+ ++ GI+IIKHAFSKGITF
Sbjct: 1 MAEEQRVEVQIPRVKLGNQGLEVSKLGFGCMGLSGVYNNPVPDDVGIAIIKHAFSKGITF 60
Query: 59 FDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGF---TSVIVKGTPEYVRSCC 115
FDTAD YGP+TNE+L+GKALKELPRE IQ+ATKFG V GF T + V GTP+YVRSCC
Sbjct: 61 FDTADGYGPFTNEVLIGKALKELPREKIQLATKFGIV--GFDPATGMTVNGTPKYVRSCC 118
Query: 116 EASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHA 175
EASL+RLDVEYIDLYYQHRVD SVPIEET+ E+KKLV EGKIKYIGLSE SPDTIRRAHA
Sbjct: 119 EASLKRLDVEYIDLYYQHRVDKSVPIEETMEELKKLVAEGKIKYIGLSEPSPDTIRRAHA 178
Query: 176 VHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFL 234
VHPITA+Q+EWSLW RDIE EIVPLCRELGIGIVPY PLGRGFFGGK V E+ P ++FL
Sbjct: 179 VHPITALQMEWSLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKVVDENAPANTFL 237
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125632|ref|XP_002319637.1| predicted protein [Populus trichocarpa] gi|222858013|gb|EEE95560.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/236 (75%), Positives = 211/236 (89%), Gaps = 2/236 (0%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE++K+ +PRVKLG QGLEVSKLG+GCM LSG YN+PL EE GISIIK A+SKGITFFD
Sbjct: 1 MAEEQKVIIPRVKLGNQGLEVSKLGFGCMGLSGMYNAPLPEEVGISIIKEAYSKGITFFD 60
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELG--FTSVIVKGTPEYVRSCCEAS 118
TAD YGP+TNEIL+GKALK LPRE IQ+ATKFG V G F + + G+PEY+R+CC+AS
Sbjct: 61 TADVYGPHTNEILVGKALKHLPREKIQLATKFGIVPNGSDFKNCAINGSPEYIRACCDAS 120
Query: 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHP 178
L+RLD+EYIDLYYQHR DTSVPIEET+GE+KKLVEEGK+KYIGLSEASPDTI+RAHAVHP
Sbjct: 121 LKRLDLEYIDLYYQHRTDTSVPIEETMGELKKLVEEGKVKYIGLSEASPDTIKRAHAVHP 180
Query: 179 ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFL 234
I+AVQ+EWSLW+RDIE EI+PLCRELGI +VPY P+GRGFFGG+AV+ES+P ++ L
Sbjct: 181 ISAVQMEWSLWSRDIEEEIIPLCRELGIAVVPYSPIGRGFFGGRAVMESLPSETVL 236
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356573095|ref|XP_003554700.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein PCNT115-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/232 (78%), Positives = 207/232 (89%), Gaps = 1/232 (0%)
Query: 5 KKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADK 64
+ +++PRVKLGTQGLEVSKLGYGCM L+G YN PL EE+GISIIKHAFSKGITFFDT+D
Sbjct: 3 QSVEIPRVKLGTQGLEVSKLGYGCMGLTGAYNDPLPEEEGISIIKHAFSKGITFFDTSDI 62
Query: 65 YGP-YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLD 123
YGP + NEI++GKALK+LPRE IQ+ATKFG ++ + + VKGTPEY RSCCEASL+RL
Sbjct: 63 YGPDHANEIVVGKALKQLPREKIQIATKFGITKIDSSGMFVKGTPEYARSCCEASLKRLG 122
Query: 124 VEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQ 183
VEYIDLYYQHRVD SVPIEETIGE+KKLVEEGK++YIGLSEASPDTIRRAHAVHPITAVQ
Sbjct: 123 VEYIDLYYQHRVDLSVPIEETIGELKKLVEEGKVRYIGLSEASPDTIRRAHAVHPITAVQ 182
Query: 184 LEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
+EWSLW RDIE+EI+PLC+ELGIGIVPY PLGRGFFGGK V+E+V S LV
Sbjct: 183 MEWSLWTRDIEDEIIPLCKELGIGIVPYSPLGRGFFGGKGVLETVSTVSSLV 234
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|378548275|sp|C6TBN2.1|AKR1_SOYBN RecName: Full=Probable aldo-keto reductase 1; Short=GmAKR1 gi|255637828|gb|ACU19234.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/229 (77%), Positives = 201/229 (87%)
Query: 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKY 65
+ Q+ VKLGTQG EVSKLG+GCM L+G YN PL E+DGIS+IK+AFSKGITFFDTAD Y
Sbjct: 3 QAQIQPVKLGTQGFEVSKLGFGCMGLTGAYNDPLQEQDGISVIKYAFSKGITFFDTADVY 62
Query: 66 GPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVE 125
G NE+L+GKALK+LPRE IQ+ATKFG GF + ++G+PEYVRSCCE L+RLDVE
Sbjct: 63 GANANELLVGKALKQLPREKIQIATKFGIASRGFPDMKIEGSPEYVRSCCETGLKRLDVE 122
Query: 126 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185
YIDLYYQHRVDTSVPIEET+GE+KKLVEEGK+KYIGLSEASPDTIRRAHA+HPITAVQ+E
Sbjct: 123 YIDLYYQHRVDTSVPIEETVGELKKLVEEGKVKYIGLSEASPDTIRRAHAIHPITAVQIE 182
Query: 186 WSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFL 234
WSLW RDIE EIVPLCRELGIGIVPY PLGRGFFGGK VVE+VP +S L
Sbjct: 183 WSLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKGVVENVPTNSSL 231
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356505965|ref|XP_003521759.1| PREDICTED: auxin-induced protein PCNT115-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/236 (76%), Positives = 206/236 (87%), Gaps = 1/236 (0%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE + +Q+P+VKLGTQGL VSKLG GCM+LSG YN PL EE+GIS+IKHAFS+GITFFD
Sbjct: 1 MAEAESVQIPQVKLGTQGLVVSKLGLGCMTLSGRYNDPLPEEEGISVIKHAFSQGITFFD 60
Query: 61 TADKYG-PYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119
T+D YG + NE LLGKALK+LPRE IQVATKFG F + +KGTPEYVRSCCEASL
Sbjct: 61 TSDLYGLDHANEFLLGKALKQLPREKIQVATKFGVAVAKFPNFQIKGTPEYVRSCCEASL 120
Query: 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPI 179
+RLDVEYIDLYYQHR+D +VPIEET+GE+KKLVEEGK+KYIGLSEASPDTIRRAHAVHPI
Sbjct: 121 KRLDVEYIDLYYQHRIDQTVPIEETVGELKKLVEEGKVKYIGLSEASPDTIRRAHAVHPI 180
Query: 180 TAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
TA+Q+EWSLW RDIE EI+PLCRELGIGIVPY PLGRGFFGGK V+E++P + L
Sbjct: 181 TALQIEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKGVLENMPASTVLT 236
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116781851|gb|ABK22267.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
|---|
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/227 (81%), Positives = 202/227 (88%), Gaps = 1/227 (0%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
+PRVKLG QGLEVSKLGYGCM L+G YN+P+SEEDGISIIK+AF KGITFFDTAD YG
Sbjct: 6 IPRVKLGNQGLEVSKLGYGCMGLTGIYNNPVSEEDGISIIKYAFEKGITFFDTADVYGST 65
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
NE+L+GKALK+LPREN+Q+ATKFG V + + KGTPEYVR CCEASL+RLDVEYID
Sbjct: 66 KNEVLVGKALKQLPRENVQLATKFGIVMID-GKMDAKGTPEYVRKCCEASLKRLDVEYID 124
Query: 129 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
LYYQHRVDT+VPIEETIGE+KKLVEEGKIKYIGLSEAS DTIRRAHAVHPITAVQLEWSL
Sbjct: 125 LYYQHRVDTTVPIEETIGELKKLVEEGKIKYIGLSEASVDTIRRAHAVHPITAVQLEWSL 184
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
W RDIE IVP+CRELGIGIVPY PLGRGFF GKAVVES+P +S LV
Sbjct: 185 WTRDIEESIVPVCRELGIGIVPYSPLGRGFFSGKAVVESLPENSSLV 231
|
Source: Picea sitchensis Species: Picea sitchensis Genus: Picea Family: Pinaceae Order: Coniferales Class: Coniferopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451312|ref|XP_002278643.1| PREDICTED: auxin-induced protein PCNT115 [Vitis vinifera] gi|298204874|emb|CBI34181.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/232 (78%), Positives = 204/232 (87%), Gaps = 5/232 (2%)
Query: 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKY 65
++Q+PRVKLG QGLEVSKLG+GCM LSG YN+P+ ++ GI+IIKHAFSKGITFFDTAD Y
Sbjct: 3 EIQIPRVKLGNQGLEVSKLGFGCMGLSGVYNNPVPDDVGIAIIKHAFSKGITFFDTADVY 62
Query: 66 GPYTNEILLGKALKELPRENIQVATKFGFVELGF---TSVIVKGTPEYVRSCCEASLRRL 122
GP+TNE+L+GKALKELPRE IQ+ATKFG GF T + V GTP+YVRSCCEASL+RL
Sbjct: 63 GPFTNEVLIGKALKELPREKIQLATKFGIA--GFDPATGMTVNGTPKYVRSCCEASLKRL 120
Query: 123 DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAV 182
DVEYIDLYYQHRVD SVPIEET+ E+KKLV EGKIKYIGLSE SPDTIRRAHAVHPITA+
Sbjct: 121 DVEYIDLYYQHRVDKSVPIEETMEELKKLVAEGKIKYIGLSEPSPDTIRRAHAVHPITAL 180
Query: 183 QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFL 234
Q+EWSLW RDIE EIVPLCRELGIGIVPY PLGRGFFGGK V E+ P ++FL
Sbjct: 181 QMEWSLWTRDIEEEIVPLCRELGIGIVPYSPLGRGFFGGKVVDENAPANTFL 232
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 235 | ||||||
| TAIR|locus:2036591 | 346 | AT1G60680 "AT1G60680" [Arabido | 0.982 | 0.667 | 0.632 | 2.1e-75 | |
| TAIR|locus:2036504 | 345 | ATB2 [Arabidopsis thaliana (ta | 0.953 | 0.649 | 0.654 | 2.1e-75 | |
| TAIR|locus:2036611 | 345 | AT1G60690 "AT1G60690" [Arabido | 0.978 | 0.666 | 0.641 | 5.7e-75 | |
| TAIR|locus:2036551 | 330 | AT1G60750 [Arabidopsis thalian | 0.931 | 0.663 | 0.645 | 1.7e-73 | |
| TAIR|locus:2196446 | 344 | AT1G10810 "AT1G10810" [Arabido | 0.931 | 0.636 | 0.642 | 4.3e-70 | |
| TIGR_CMR|SPO_A0345 | 327 | SPO_A0345 "oxidoreductase, ald | 0.889 | 0.639 | 0.549 | 2.9e-55 | |
| TIGR_CMR|GSU_3126 | 334 | GSU_3126 "oxidoreductase, aldo | 0.885 | 0.622 | 0.516 | 3e-53 | |
| UNIPROTKB|G4NAH9 | 341 | MGG_09715 "Aldo-keto reductase | 0.897 | 0.618 | 0.445 | 5.7e-43 | |
| POMBASE|SPAC1F7.12 | 340 | yak3 "aldose reductase ARK13 f | 0.902 | 0.623 | 0.431 | 3.6e-41 | |
| ASPGD|ASPL0000051701 | 339 | AN10217 [Emericella nidulans ( | 0.906 | 0.628 | 0.420 | 1.6e-38 |
| TAIR|locus:2036591 AT1G60680 "AT1G60680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 148/234 (63%), Positives = 181/234 (77%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE +V R+KLG+QGLEVS G GCM+LS Y +P E D I+++ HA + G+TFFD
Sbjct: 1 MAE--ACRVRRMKLGSQGLEVSAQGLGCMALSARYGAPKPETDAIALLHHAINSGVTFFD 58
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
T+D YGP TNE+LLGKALK+ +E +++ATKFGF + V+G PEYVR+ CEASL+
Sbjct: 59 TSDMYGPETNELLLGKALKDGVKEKVELATKFGFFIVEGEISEVRGDPEYVRAACEASLK 118
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RLD+ IDLYYQHR+DT VPIE T+ E+KKLVEEGKIKYIGLSEAS TIRRAHAVHPIT
Sbjct: 119 RLDIACIDLYYQHRIDTRVPIEITMRELKKLVEEGKIKYIGLSEASASTIRRAHAVHPIT 178
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESVPLDSF 233
AVQ+EWSLW+RD E +I+P+CRELGIGIV Y PLGRGF G + E++ D F
Sbjct: 179 AVQIEWSLWSRDAEEDIIPICRELGIGIVAYSPLGRGFLAAGPKLAENLENDDF 232
|
|
| TAIR|locus:2036504 ATB2 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 148/226 (65%), Positives = 174/226 (76%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+KLG+QGLEVS G GCM LS Y +P E + I++I HA G+T DT+D YGP
Sbjct: 7 VRRMKLGSQGLEVSAQGLGCMGLSAFYGAPKPENEAIALIHHAIHSGVTLLDTSDIYGPE 66
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
TNE+LLGKALK+ RE +++ATKFG + V+G PEYVR+ CEASL+RLD+ ID
Sbjct: 67 TNEVLLGKALKDGVREKVELATKFG-ISYAEGKREVRGDPEYVRAACEASLKRLDIACID 125
Query: 129 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
LYYQHRVDT VPIE T+GE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPITAVQ+EWSL
Sbjct: 126 LYYQHRVDTRVPIEITMGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWSL 185
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESVPLDSF 233
W RD+E EI+P CRELGIGIV Y PLGRGFF G +VE++ D F
Sbjct: 186 WTRDVEEEIIPTCRELGIGIVAYSPLGRGFFASGPKLVENLEKDDF 231
|
|
| TAIR|locus:2036611 AT1G60690 "AT1G60690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 150/234 (64%), Positives = 178/234 (76%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE +V R+KLG+QGLEVS G GCM L+G Y + E + I++I HA G+TF D
Sbjct: 1 MAES--CRVRRIKLGSQGLEVSAQGLGCMGLTGHYGASKPETEAIALIHHAIHSGVTFLD 58
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
T+D YGP TNEILLGKALK+ RE +++ATKFG + + +KG P YVR+ CEASL+
Sbjct: 59 TSDMYGPETNEILLGKALKDGVREKVELATKFG-ISYAEGNREIKGDPAYVRAACEASLK 117
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RLDV IDLYYQHR+DT VPIE T+GE+KKL+EEGKIKYIGLSEAS TIRRAH VHPIT
Sbjct: 118 RLDVTCIDLYYQHRIDTRVPIEITMGELKKLIEEGKIKYIGLSEASASTIRRAHTVHPIT 177
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESVPLDSF 233
AVQLEWSLW RD+E EIVP CRELGIGIV Y PLGRGFF G +VE++ + F
Sbjct: 178 AVQLEWSLWTRDVEEEIVPTCRELGIGIVSYSPLGRGFFASGPKLVENLDNNDF 231
|
|
| TAIR|locus:2036551 AT1G60750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 142/220 (64%), Positives = 172/220 (78%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
MAE+ QV R+KLG+QGLEVS G GCM LS Y +P E + +++++HA + G+TF D
Sbjct: 1 MAEEA-CQVRRMKLGSQGLEVSAQGLGCMGLSDFYGAPTPETNAVALLRHAINAGVTFLD 59
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
T+D YGP TNE+LLGKALK+ R+ +++ATKFG +G PEYVR CEASL+
Sbjct: 60 TSDIYGPETNELLLGKALKDGLRDKVELATKFGITASEDGKFGFRGDPEYVRIACEASLK 119
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
RL V IDLYYQHR+DT++PIE TIGE+KKLVEEGKIKYIGLSEAS TIRRAHAVHPIT
Sbjct: 120 RLGVTCIDLYYQHRIDTTLPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPIT 179
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220
AVQ+EWSLW+RD+E +I+P CRELGIGIV Y PLGRGF G
Sbjct: 180 AVQIEWSLWSRDVEEDIIPTCRELGIGIVAYSPLGRGFLG 219
|
|
| TAIR|locus:2196446 AT1G10810 "AT1G10810" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 142/221 (64%), Positives = 169/221 (76%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+KLG+QGLEVS G GCM LS + E D I++I HA + GIT DT+D YGP
Sbjct: 7 VRRIKLGSQGLEVSAQGLGCMGLSIFDGTTKVETDLIALIHHAINSGITLLDTSDIYGPE 66
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
TNE+LLG+ALK+ RE +++ATKFG + L + +G P YVR+ CEASLRRL V ID
Sbjct: 67 TNELLLGQALKDGMREKVELATKFGLL-LKDQKLGYRGDPAYVRAACEASLRRLGVSCID 125
Query: 129 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
LYYQHR+DT+VPIE TIGE+KKLVEEGKIKYIGLSEA TIRRAHAVHP+TAVQLEWSL
Sbjct: 126 LYYQHRIDTTVPIEVTIGELKKLVEEGKIKYIGLSEACASTIRRAHAVHPLTAVQLEWSL 185
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFG-GKAVVESV 228
W+RD+E +I+P CRELGIGIV Y PLG GFF G +ES+
Sbjct: 186 WSRDVEEDIIPTCRELGIGIVAYSPLGLGFFAAGPKFIESM 226
|
|
| TIGR_CMR|SPO_A0345 SPO_A0345 "oxidoreductase, aldo/keto reductase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 117/213 (54%), Positives = 146/213 (68%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN 70
R KLG Q LEVS +G GCM +S Y P +E + ++ A GI FFDTAD YGP+ N
Sbjct: 3 RRKLG-QDLEVSAIGLGCMGMSEFYG-PRDDEKSLDVMSRAVVLGIDFFDTADMYGPHHN 60
Query: 71 EILLGKALKELPRENIQVATKFGFVEL-GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
E L+G L++ R IQVATKFG V G + + Y R+ CE SLRRL V+ IDL
Sbjct: 61 EELIGTFLRQ-SRARIQVATKFGIVRNPGEYKRSLDNSASYARTACEGSLRRLGVDCIDL 119
Query: 130 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLW 189
YY HRV+T+ PIEET+ + LV+EGKI IGL E S +T+RRAHAVHP+TAVQ E+SLW
Sbjct: 120 YYVHRVNTNQPIEETMEGLAALVKEGKIARIGLCEVSAETLRRAHAVHPVTAVQTEYSLW 179
Query: 190 ARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
+R++EN ++P CR LGIG VPY PLGRGF G+
Sbjct: 180 SREVENSVLPTCRALGIGFVPYSPLGRGFLTGR 212
|
|
| TIGR_CMR|GSU_3126 GSU_3126 "oxidoreductase, aldo/keto reductase family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 111/215 (51%), Positives = 147/215 (68%)
Query: 14 LGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEIL 73
LG GLEVS LG GCM +S Y P E+ I++++ A +GITFFDTA+ YGP+ NE L
Sbjct: 6 LGKSGLEVSALGLGCMGMSFSYGPPKDREEMIALLRTAVERGITFFDTAEVYGPFINEEL 65
Query: 74 LGKALKELPRENIQVATKFGF---VE---LGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
+G+AL L RE + +ATKFGF V+ + ++ PE++R+ EASLRRL + I
Sbjct: 66 VGEALAPL-RERVVIATKFGFDTSVDPRAMKGQGPVLNSRPEHIRAVAEASLRRLRTDVI 124
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DL+YQHRVD +VPIEE G +K+L+ EGK+K+ GLSEA +T+RRAHAV P+ VQ E+S
Sbjct: 125 DLFYQHRVDPAVPIEEVAGAVKELIREGKVKHFGLSEAGIETVRRAHAVQPVACVQNEYS 184
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
LW R E ++ ELGIG+V Y PLG+GF GK
Sbjct: 185 LWFRRPEEGLLQALEELGIGLVAYSPLGKGFLTGK 219
|
|
| UNIPROTKB|G4NAH9 MGG_09715 "Aldo-keto reductase yakc" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 98/220 (44%), Positives = 137/220 (62%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
Q+P ++G G EV+ +G+G M LS Y + SEE+ ++ A+ G T +DTAD YG
Sbjct: 6 QIPTRRMGKDGPEVACIGFGLMGLSFGYGAVESEEERFKVLDRAWEIGATNWDTADIYGD 65
Query: 68 YTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVE 125
+E L+GK K P R++I +ATKFG V ++ +PEY R S RL V+
Sbjct: 66 --SEDLVGKWFKMHPERRKDIFLATKFG-VTGTIENLSANSSPEYCRQASRRSFERLGVD 122
Query: 126 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185
Y+DLYY HR+ SVP+E+TI M +LV+EGK+KY+G+SE S ++RRAH VHPI AVQ+E
Sbjct: 123 YVDLYYVHRLTESVPVEKTIEAMAELVKEGKVKYLGMSECSSSSVRRAHKVHPIAAVQVE 182
Query: 186 WSLWARDIENE----IVPLCRELGIGIVPYCPLGRGFFGG 221
++ W IE + ++ CRELGI +V Y P RG G
Sbjct: 183 YNPWDLAIEGDEGTNLLATCRELGISVVAYSPFSRGLLTG 222
|
|
| POMBASE|SPAC1F7.12 yak3 "aldose reductase ARK13 family YakC" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 95/220 (43%), Positives = 136/220 (61%)
Query: 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG 66
+ +P K+G V +G+GCM L Y P SEE +++ HA G TF+D++D YG
Sbjct: 1 MSIPTRKIGND--TVPAIGFGCMGLHAMYG-PSSEEANQAVLTHAADLGCTFWDSSDMYG 57
Query: 67 PYTNEILLGKALKELPR-ENIQVATKFGFVELGFTSVI-VKGTPEYVRSCCEASLRRLDV 124
NE +G+ K+ R + I +ATKFG+ + T + + P+Y+ + SL+RL +
Sbjct: 58 FGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGI 117
Query: 125 EYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184
+ IDLYY HR PIE+ +G +KK VE GKI+YIGLSE S +TIRRA AV+P++AVQ+
Sbjct: 118 DCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQV 177
Query: 185 EWSLWARDIENE---IVPLCRELGIGIVPYCPLGRGFFGG 221
E+S ++ +IE ++ CRE I IV Y PLGRGF G
Sbjct: 178 EYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTG 217
|
|
| ASPGD|ASPL0000051701 AN10217 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 93/221 (42%), Positives = 135/221 (61%)
Query: 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG 66
+ +P LG G +V +LG+G M LS Y +E+ ++++ A+ G TF+DTA YG
Sbjct: 1 MTLPTRPLGKDGPQVPRLGFGTMGLSAFYGPTKPDEERLAVLDRAYELGETFWDTAMLYG 60
Query: 67 PYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDV 124
+E L+G+ P R +I +ATKF F + V + E + CC SLRRL +
Sbjct: 61 D--SEELIGRWFAANPGKRADIFLATKFYFRWVNGERV-TDTSYENCKRCCNESLRRLGI 117
Query: 125 EYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184
+ IDL+Y HR+D PIEET+ + +L EEGKI+YIGLSE S D++RRA VH + AVQ+
Sbjct: 118 DTIDLFYAHRLDPKTPIEETMKALAELKEEGKIRYIGLSECSSDSLRRACKVHHVAAVQV 177
Query: 185 EWSLWARDIENEIVPL---CRELGIGIVPYCPLGRGFFGGK 222
E+S ++ +IE+E + L RELG+ +V Y PL RG G+
Sbjct: 178 EYSPFSLEIESEQIGLLKTARELGVAVVAYSPLSRGILSGQ 218
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q84M96 | ALKR2_ARATH | 1, ., 1, ., 1, ., - | 0.6387 | 0.9617 | 0.6531 | yes | no |
| Q3L181 | PERR_RAUSE | 1, ., 1, ., 1, ., 3, 1, 7 | 0.7412 | 0.9659 | 0.6735 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 235 | |||
| cd06660 | 285 | cd06660, Aldo_ket_red, Aldo-keto reductases (AKRs) | 8e-86 | |
| COG0667 | 316 | COG0667, Tas, Predicted oxidoreductases (related t | 3e-82 | |
| pfam00248 | 277 | pfam00248, Aldo_ket_red, Aldo/keto reductase famil | 6e-69 | |
| COG0656 | 280 | COG0656, ARA1, Aldo/keto reductases, related to di | 5e-36 | |
| COG4989 | 298 | COG4989, COG4989, Predicted oxidoreductase [Genera | 4e-30 | |
| PLN02587 | 314 | PLN02587, PLN02587, L-galactose dehydrogenase | 5e-27 | |
| COG1453 | 391 | COG1453, COG1453, Predicted oxidoreductases of the | 6e-26 | |
| PRK09912 | 346 | PRK09912, PRK09912, L-glyceraldehyde 3-phosphate r | 2e-23 | |
| PRK10376 | 290 | PRK10376, PRK10376, putative oxidoreductase; Provi | 1e-21 | |
| TIGR01293 | 317 | TIGR01293, Kv_beta, voltage-dependent potassium ch | 2e-20 | |
| PRK10625 | 346 | PRK10625, tas, putative aldo-keto reductase; Provi | 1e-15 | |
| PRK11565 | 275 | PRK11565, dkgA, 2,5-diketo-D-gluconate reductase A | 5e-10 | |
| PRK11172 | 267 | PRK11172, dkgB, 2,5-diketo-D-gluconate reductase B | 2e-06 |
| >gnl|CDD|119408 cd06660, Aldo_ket_red, Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols | Back alignment and domain information |
|---|
Score = 255 bits (655), Expect = 8e-86
Identities = 92/229 (40%), Positives = 128/229 (55%), Gaps = 11/229 (4%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN 70
LG GL+VS+LG G L G Y + EE+ + ++ A GI F DTAD YG +
Sbjct: 1 YRTLGKTGLKVSRLGLGTWQLGGGY---VDEEEAAAAVRAALDAGINFIDTADVYGDGES 57
Query: 71 EILLGKALKELP-RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
E LLG+ALKE RE + +ATK G +PE++R E SL+RL +YIDL
Sbjct: 58 EELLGEALKERGPREEVFIATKVGPRPGDG----RDLSPEHIRRAVEESLKRLGTDYIDL 113
Query: 130 YYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEW 186
Y H D P IEET+ +++LV+EGKI+ IG+S S + + A A P Q+E+
Sbjct: 114 YLLHWPDPDTPDIEETLRALEELVKEGKIRAIGVSNFSAEQLEEALAAAGVPPAVNQVEY 173
Query: 187 SLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSFLV 235
+L R E E++P CRE GIG++ Y PL G GK + + P + L+
Sbjct: 174 NLLDRQAEEELLPYCREHGIGVIAYSPLAGGLLTGKYLPGAPPPEGDLL 222
|
AKRs are present in all phyla and are of importance to both health and industrial applications. Members have very distinct functions and include the prokaryotic 2,5-diketo-D-gluconic acid reductases and beta-keto ester reductases, the eukaryotic aldose reductases, aldehyde reductases, hydroxysteroid dehydrogenases, steroid 5beta-reductases, potassium channel beta-subunits and aflatoxin aldehyde reductases, among others. Length = 285 |
| >gnl|CDD|223739 COG0667, Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 248 bits (634), Expect = 3e-82
Identities = 96/214 (44%), Positives = 131/214 (61%), Gaps = 4/214 (1%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
+LG GL+VS LG G M+L G + E + I I+ A GI FFDTAD YG +E
Sbjct: 4 RRLGRSGLKVSPLGLGTMTLGGDTDDE-EEAEAIEILDAALDAGINFFDTADVYGDGRSE 62
Query: 72 ILLGKALKELP-RENIQVATKFGFV-ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
+LG+ALKE R+ + +ATK G+ + + + +++R EASL+RL +YIDL
Sbjct: 63 EILGEALKERGRRDKVVIATKVGYRPGDPGPNGVFGLSRDHIRRAVEASLKRLGTDYIDL 122
Query: 130 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV-HPITAVQLEWSL 188
Y HR D PIEET+ + +LV EGKI+YIG+S S + I A AV PI ++Q E++L
Sbjct: 123 YQLHRPDPETPIEETLEALDELVREGKIRYIGVSNYSAEQIAEALAVAAPIDSLQPEYNL 182
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
RD E E++PLCRE GIG++ Y PL G GK
Sbjct: 183 LERDAEKELLPLCREEGIGLLAYSPLASGLLTGK 216
|
Length = 316 |
| >gnl|CDD|215817 pfam00248, Aldo_ket_red, Aldo/keto reductase family | Back alignment and domain information |
|---|
Score = 212 bits (542), Expect = 6e-69
Identities = 82/203 (40%), Positives = 120/203 (59%), Gaps = 10/203 (4%)
Query: 23 KLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKEL- 81
+LG G SL +S+E+ + +++ A GI DTA+ YG +E LLG+ALK+
Sbjct: 1 RLGLGTWSLG---GLAISKEEALELLRAALEAGINLIDTAEVYGDGPSEELLGEALKKYV 57
Query: 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPI 141
PR+ + +ATK G G+ E ++ E SL+RL +Y+DLY H D S+PI
Sbjct: 58 PRDEVFIATKVGPPGPPPDD----GSRENIKKSIEESLKRLGTDYLDLYLLHWPDPSLPI 113
Query: 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRA--HAVHPITAVQLEWSLWARDIENEIVP 199
EET+ +++L +EGKI++IG+S S + +R A H PI VQ+E+SL R E ++
Sbjct: 114 EETLEALEELKKEGKIRHIGVSNFSVEQLREALEHGKVPIVVVQVEYSLLRRLAEEGLLE 173
Query: 200 LCRELGIGIVPYCPLGRGFFGGK 222
LC+E GIGI+ Y PLG G GK
Sbjct: 174 LCQENGIGIIAYSPLGGGLLTGK 196
|
This family includes a number of K+ ion channel beta chain regulatory domains - these are reported to have oxidoreductase activity. Length = 277 |
| >gnl|CDD|223729 COG0656, ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 5e-36
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
+V L G+E+ +G G + +E + ++ A G DTA+ YG
Sbjct: 4 TKVTLNN-GVEIPAIGLGTWQIGD-------DEWAVRAVRAALELGYRLIDTAEIYG--- 52
Query: 70 NEILLGKALKEL--PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
NE +G+A+KE PRE + + TK +LG+ + ++ EASL+RL ++Y+
Sbjct: 53 NEEEVGEAIKESGVPREELFITTKVWPSDLGYDETL--------KAL-EASLKRLGLDYV 103
Query: 128 DLYYQH--RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA--HAVHPITAVQ 183
DLY H + V IEET +++LV+EG I+ IG+S + + A Q
Sbjct: 104 DLYLIHWPVPNKYVVIEETWKALEELVDEGLIRAIGVSNFGVEHLEELLSLAKVKPAVNQ 163
Query: 184 LEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+E+ + R E++P C+ GI + Y PL +G
Sbjct: 164 IEYHPYLRQP--ELLPFCQRHGIAVEAYSPLAKG 195
|
Length = 280 |
| >gnl|CDD|227322 COG4989, COG4989, Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 4e-30
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN 70
R+ L GLE S++ G L+ + +S + +S I+ A GIT FD AD YG Y
Sbjct: 3 RITLAPDGLEFSRIVLGYWRLN---DWNMSARELLSFIETALELGITTFDHADIYGGYQC 59
Query: 71 EILLGKALKELP--RENIQVATKFGFVELGFTSVIVK---GTPEYVRSCCEASLRRLDVE 125
E L G+ALK P RE I++ +K G + + E++ E SL L +
Sbjct: 60 EALFGEALKLAPGLREKIEIVSKCGIRLPSREEPRIGHYDTSKEHIIKSVEQSLINLKTD 119
Query: 126 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIR--RAHAVHPITAVQ 183
Y+DL HR D + EE L + GK+++ G+S +P ++ + Q
Sbjct: 120 YLDLLLIHRPDPLMDAEEVAEAFTHLHKSGKVRHFGVSNFNPAQFELLQSRLPFTLVTNQ 179
Query: 184 LEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRG 217
LE S + + + C++L + + + PLG G
Sbjct: 180 LELSPLHTPMLLDGTLDYCQQLRVRPMAWSPLGGG 214
|
Length = 298 |
| >gnl|CDD|178198 PLN02587, PLN02587, L-galactose dehydrogenase | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 5e-27
Identities = 71/219 (32%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 13 KLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEI 72
+LG+ GL+VS +G+G L + P+SEED I+ ++ AF GI FFDT+ YG +E
Sbjct: 3 ELGSTGLKVSSVGFGASPLGSVF-GPVSEEDAIASVREAFRLGINFFDTSPYYGGTLSEK 61
Query: 73 LLGKALKEL--PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLY 130
+LGKALK L PRE V+TK G GF + E V + SL RL ++Y+D+
Sbjct: 62 VLGKALKALGIPREKYVVSTKCGRYGEGFDF-----SAERVTKSVDESLARLQLDYVDIL 116
Query: 131 YQHRVD-TSVP--IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
+ H ++ S+ + ETI ++KL E GK+++IG++ P V + S
Sbjct: 117 HCHDIEFGSLDQIVNETIPALQKLKESGKVRFIGITGLPLAIFTYVLDRVPPGTVDVILS 176
Query: 188 LWARDIEN----EIVPLCRELGIGIVPYCPLGRGFFGGK 222
+ + +++P + G+G++ PL G
Sbjct: 177 YCHYSLNDSSLEDLLPYLKSKGVGVISASPLAMGLLTEN 215
|
Length = 314 |
| >gnl|CDD|224370 COG1453, COG1453, Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 6e-26
Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 13 KLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEI 72
K G E+S LG+GCM L + EE+ I +A GI + DTA Y +E
Sbjct: 5 KFPKTGDELSILGFGCMRLPLKEQGSIDEENANETIDYAIEHGINYIDTAWPYHGGESEE 64
Query: 73 LLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQ 132
LGKALK+ RE +++ATK S VK E + L +L +YID Y
Sbjct: 65 FLGKALKDGYREKVKLATK-------LPSWPVK-DREDMERIFNEQLEKLGTDYIDYYLI 116
Query: 133 HRVDTSVPIEETIGEMK---------KLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAV 182
H ++T ET +++ K EGKI+ G S S + + +P V
Sbjct: 117 HGLNT-----ETWEKIERLGVFDFLEKAKAEGKIRNAGFSFHGSTEVFKEIVDAYPWDFV 171
Query: 183 QLEWSLWARDIENEIVP----LCRELGIGIVPYCPLGRG 217
QL+++ D +N+ G+GI PL G
Sbjct: 172 QLQYNYI--DQKNQAGTEGLKYAASKGLGIFIMEPLDGG 208
|
Length = 391 |
| >gnl|CDD|182140 PRK09912, PRK09912, L-glyceraldehyde 3-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Score = 95.8 bits (238), Expect = 2e-23
Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 16/229 (6%)
Query: 15 GTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY--TNEI 72
G GL + L G G + + L + +I++ AF GIT FD A+ YGP + E
Sbjct: 19 GKSGLRLPALSLGLWHNFG-HVNALESQR--AILRKAFDLGITHFDLANNYGPPPGSAEE 75
Query: 73 LLGKALKE---LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
G+ L+E R+ + ++TK G+ ++ G+ +Y+ + + SL+R+ +EY+D+
Sbjct: 76 NFGRLLREDFAAYRDELIISTKAGY-DMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDI 134
Query: 130 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPD-TIRRAHAVH----PITAVQL 184
+Y HRVD + P+EET + V+ GK Y+G+S SP+ T + + P+ Q
Sbjct: 135 FYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQP 194
Query: 185 EWSLWARDIENE-IVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDS 232
++L R ++ ++ + G+G + + PL +G GK + +P DS
Sbjct: 195 SYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGK-YLNGIPQDS 242
|
Length = 346 |
| >gnl|CDD|236676 PRK10376, PRK10376, putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 1e-21
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 14/210 (6%)
Query: 18 GLEVSKLGYGCMSLSG--CYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY-TNEILL 74
G V++LGYG M L+G + P + I++++ A + G+ DT+D YGP+ TN+ L+
Sbjct: 14 GRSVNRLGYGAMQLAGPGVFGPPKDRDAAIAVLREAVALGVNHIDTSDFYGPHVTNQ-LI 72
Query: 75 GKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHR 134
+AL P +++ + TK G S + +P +R +LR L ++ +D+ R
Sbjct: 73 REALHPYP-DDLTIVTKVGARRGEDGSWLPAFSPAELRRAVHDNLRNLGLDVLDVV-NLR 130
Query: 135 V--DTSVPIEETIGE-MKKLVE---EGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
+ D P E +I E + L E +G +++IGLS +P + A + I VQ ++L
Sbjct: 131 LMGDGHGPAEGSIEEPLTVLAELQRQGLVRHIGLSNVTPTQVAEARKIAEIVCVQNHYNL 190
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGF 218
R + I L R+ GI VP+ PLG GF
Sbjct: 191 AHRADDALIDALARD-GIAYVPFFPLG-GF 218
|
Length = 290 |
| >gnl|CDD|213602 TIGR01293, Kv_beta, voltage-dependent potassium channel beta subunit, animal | Back alignment and domain information |
|---|
Score = 87.7 bits (217), Expect = 2e-20
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 14 LGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEIL 73
LG GL VS LG G + +S+E ++ A+ GI FDTA+ Y E++
Sbjct: 4 LGKSGLRVSCLGLGTWVT---FGGQISDEMAEQLLTLAYENGINLFDTAEVYAAGKAEVV 60
Query: 74 LGKALKE--LPRENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLY 130
LG LK+ R + + TK + G + +G + +++ +ASL RL +EY+D+
Sbjct: 61 LGNILKKKGWRRSSYVITTK---IFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDIV 117
Query: 131 YQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQL 184
+ +R D + P+EET+ M ++ +G Y G S S I A++V P Q
Sbjct: 118 FANRPDPNTPMEETVRAMTYVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQA 177
Query: 185 EWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
E+ ++ R+ +E ++ L ++G+G + + PL G GK
Sbjct: 178 EYHMFQREKVEVQLPELYHKIGVGAMTWSPLACGLVSGK 216
|
This model describes the conserved core region of the beta subunit of voltage-gated potassium (Kv) channels in animals. Amino-terminal regions differ substantially, in part by alternative splicing, and are not included in the model. Four beta subunits form a complex with four alpha subunit cytoplasmic (T1) regions, and the structure of the complex is solved. The beta subunit belongs to a family of NAD(P)H-dependent aldo-keto reductases, binds NADPH, and couples voltage-gated channel activity to the redox potential of the cell. Plant beta subunits and their closely related bacterial homologs (in Deinococcus radiudurans, Xylella fastidiosa, etc.) appear more closely related to each other than to animal forms. However, the bacterial species lack convincing counterparts the Kv alpha subunit and the Kv beta homolog may serve as an enzyme. Cutoffs are set for this model such that yeast and plant forms and bacterial close homologs score between trusted and noise cutoffs. Length = 317 |
| >gnl|CDD|236727 PRK10625, tas, putative aldo-keto reductase; Provisional | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 1e-15
Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 38/238 (15%)
Query: 19 LEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG----PYTN---E 71
LEVS LG G M+ G NS E D + + +A ++GI D A+ Y P T E
Sbjct: 11 LEVSTLGLGTMTF-GEQNS---EADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTE 66
Query: 72 ILLGKALKEL-PRENIQVATKFGFVELGFTSVIVKGTP---EYVRSCCEASLRRLDVEYI 127
+G L + RE + +A+K I + +R SL+RL +Y+
Sbjct: 67 TYIGNWLAKRGSREKLIIASKVSGPSRNNDKGIRPNQALDRKNIREALHDSLKRLQTDYL 126
Query: 128 DLY----------------YQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLSEASPDTI 170
DLY Y +V + ET+ + + GKI+YIG+S + +
Sbjct: 127 DLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLETLDALAEQQRAGKIRYIGVSNETAFGV 186
Query: 171 RR------AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
R H + I +Q +SL R E + + + G+ ++ Y L G GK
Sbjct: 187 MRYLHLAEKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLAFGTLTGK 244
|
Length = 346 |
| >gnl|CDD|183203 PRK11565, dkgA, 2,5-diketo-D-gluconate reductase A; Provisional | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 5e-10
Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 23/139 (16%)
Query: 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVEL 97
S E+ I+ I A G DTA Y NE +GKALKE + RE + + TK
Sbjct: 26 SNEEVITAIHKALEVGYRSIDTAAIYK---NEEGVGKALKEASVAREELFITTK------ 76
Query: 98 GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQH----RVDTSVPIEETIGEMKKLVE 153
+ + R E SL++L ++Y+DLY H +D V E M +L +
Sbjct: 77 -----LWNDDHKRPREALEESLKKLQLDYVDLYLMHWPVPAIDHYV---EAWKGMIELQK 128
Query: 154 EGKIKYIGLSEASPDTIRR 172
EG IK IG+ ++R
Sbjct: 129 EGLIKSIGVCNFQIHHLQR 147
|
Length = 275 |
| >gnl|CDD|183012 PRK11172, dkgB, 2,5-diketo-D-gluconate reductase B; Provisional | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 45 ISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVELGFTSV 102
I +K A G DTA Y NE +G+A+ E +PR+ + + TK L +
Sbjct: 19 IDSVKTALELGYRAIDTAQIYD---NEAAVGQAIAESGVPRDELFITTKIWIDNLAKDKL 75
Query: 103 IVKGTPEYVRSCCEASLRRLDVEYIDLYYQH--RVDTSVPIEETIGEMKKLVEEGKIKYI 160
I + SL++L +Y+DL H + V +EE + + + ++G + I
Sbjct: 76 I---------PSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQGLTREI 126
Query: 161 GLSEASPDTIRRAHAV---HPITAVQLEWSLWARDIEN-EIVPLCRELGIGIVPYCPLGR 216
G+S + +++A A I Q+E S + ++N ++V +E GI + Y L
Sbjct: 127 GISNFTIALMKQAIAAVGAENIATNQIELSPY---LQNRKVVAFAKEHGIHVTSYMTLAY 183
Query: 217 G 217
G
Sbjct: 184 G 184
|
Length = 267 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 235 | |||
| COG0667 | 316 | Tas Predicted oxidoreductases (related to aryl-alc | 100.0 | |
| KOG1575 | 336 | consensus Voltage-gated shaker-like K+ channel, su | 100.0 | |
| TIGR01293 | 317 | Kv_beta voltage-dependent potassium channel beta s | 100.0 | |
| PRK09912 | 346 | L-glyceraldehyde 3-phosphate reductase; Provisiona | 100.0 | |
| PRK10625 | 346 | tas putative aldo-keto reductase; Provisional | 100.0 | |
| COG0656 | 280 | ARA1 Aldo/keto reductases, related to diketogulona | 100.0 | |
| cd06660 | 285 | Aldo_ket_red Aldo-keto reductases (AKRs) are a sup | 100.0 | |
| PLN02587 | 314 | L-galactose dehydrogenase | 100.0 | |
| KOG1577 | 300 | consensus Aldo/keto reductase family proteins [Gen | 100.0 | |
| PRK10376 | 290 | putative oxidoreductase; Provisional | 100.0 | |
| PF00248 | 283 | Aldo_ket_red: Aldo/keto reductase family; InterPro | 100.0 | |
| PRK14863 | 292 | bifunctional regulator KidO; Provisional | 100.0 | |
| PRK11172 | 267 | dkgB 2,5-diketo-D-gluconate reductase B; Provision | 100.0 | |
| COG4989 | 298 | Predicted oxidoreductase [General function predict | 100.0 | |
| KOG1576 | 342 | consensus Predicted oxidoreductase [Energy product | 100.0 | |
| PRK11565 | 275 | dkgA 2,5-diketo-D-gluconate reductase A; Provision | 100.0 | |
| COG1453 | 391 | Predicted oxidoreductases of the aldo/keto reducta | 100.0 | |
| KOG3023 | 285 | consensus Glutamate-cysteine ligase regulatory sub | 98.26 | |
| cd03319 | 316 | L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase cat | 95.77 | |
| cd03316 | 357 | MR_like Mandelate racemase (MR)-like subfamily of | 93.63 | |
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 93.16 | |
| cd03315 | 265 | MLE_like Muconate lactonizing enzyme (MLE) like su | 92.58 | |
| TIGR02370 | 197 | pyl_corrinoid methyltransferase cognate corrinoid | 90.3 | |
| PRK13958 | 207 | N-(5'-phosphoribosyl)anthranilate isomerase; Provi | 90.2 | |
| cd03174 | 265 | DRE_TIM_metallolyase DRE-TIM metallolyase superfam | 89.76 | |
| PRK08609 | 570 | hypothetical protein; Provisional | 89.28 | |
| COG0135 | 208 | TrpF Phosphoribosylanthranilate isomerase [Amino a | 88.99 | |
| COG1140 | 513 | NarY Nitrate reductase beta subunit [Energy produc | 88.51 | |
| cd02070 | 201 | corrinoid_protein_B12-BD B12 binding domain of cor | 87.15 | |
| PRK01222 | 210 | N-(5'-phosphoribosyl)anthranilate isomerase; Provi | 86.7 | |
| cd00308 | 229 | enolase_like Enolase-superfamily, characterized by | 85.42 | |
| PRK10550 | 312 | tRNA-dihydrouridine synthase C; Provisional | 84.79 | |
| PF00682 | 237 | HMGL-like: HMGL-like of this family is not conserv | 84.25 | |
| PRK08392 | 215 | hypothetical protein; Provisional | 84.04 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 83.46 | |
| PF03102 | 241 | NeuB: NeuB family; InterPro: IPR013132 NeuB is the | 83.34 | |
| TIGR01928 | 324 | menC_lowGC/arch o-succinylbenzoic acid (OSB) synth | 83.31 | |
| cd03323 | 395 | D-glucarate_dehydratase D-Glucarate dehydratase (G | 83.29 | |
| cd03318 | 365 | MLE Muconate Lactonizing Enzyme (MLE), an homoocta | 82.56 | |
| PLN02363 | 256 | phosphoribosylanthranilate isomerase | 82.53 | |
| TIGR01278 | 511 | DPOR_BchB light-independent protochlorophyllide re | 82.33 | |
| cd03322 | 361 | rpsA The starvation sensing protein RpsA from E.co | 81.53 | |
| cd03325 | 352 | D-galactonate_dehydratase D-galactonate dehydratas | 81.19 | |
| cd04740 | 296 | DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c | 80.87 |
| >COG0667 Tas Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-56 Score=381.24 Aligned_cols=217 Identities=44% Similarity=0.718 Sum_probs=196.8
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCC-CCCEE
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIQ 87 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~-R~~~~ 87 (235)
|++++||++|++||+||||||.+|+.+. ..+.+++.++|++|+++||||||||+.||.|.||+++|+||+..+ |++++
T Consensus 1 m~~r~lG~~gl~vs~lglG~~~~g~~~~-~~~~~~a~~il~~A~d~Gin~~DTA~~Yg~g~sE~ilG~~l~~~~~Rd~vv 79 (316)
T COG0667 1 MKYRRLGRSGLKVSPLGLGTMTLGGDTD-DEEEAEAIEILDAALDAGINFFDTADVYGDGRSEEILGEALKERGRRDKVV 79 (316)
T ss_pred CCceecCCCCceecceeeeccccCCCCC-chhhhHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHhccCCCCeEE
Confidence 6899999999999999999999987422 235567888999999999999999999999999999999999744 89999
Q ss_pred EEeccccccCCCccc-ccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCCC
Q 026625 88 VATKFGFVELGFTSV-IVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 166 (235)
Q Consensus 88 I~tK~~~~~~~~~~~-~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~ 166 (235)
|+||++......+.. ..+.++++|+++++.||+|||+||||+|++|+|+...+..+.+++|.+|+++|+||+||+||++
T Consensus 80 IaTK~g~~~~~~~~~~~~~~s~~~i~~~v~~SL~RLgtd~IDl~~iH~~d~~~p~~e~~~aL~~l~~~G~ir~iG~S~~~ 159 (316)
T COG0667 80 IATKVGYRPGDPGPNGVFGLSRDHIRRAVEASLKRLGTDYIDLYQLHRPDPETPIEETLEALDELVREGKIRYIGVSNYS 159 (316)
T ss_pred EEEeeccCCCCCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeeEEEecCCC
Confidence 999998776421222 3567999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc-CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCCCCCC
Q 026625 167 PDTIRRAHAV-HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVE 226 (235)
Q Consensus 167 ~~~l~~~~~~-~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~ 226 (235)
.+++.++.+. .+++++|.+||++++..+.+++++|+++||++++||||++|+|++++.+.
T Consensus 160 ~~~i~~a~~~~~~~~~~Q~~ynl~~R~~e~~l~~~~~~~gi~~~~~spla~G~Ltgk~~~~ 220 (316)
T COG0667 160 AEQIAEALAVAAPIDSLQPEYNLLERDAEKELLPLCREEGIGLLAYSPLASGLLTGKYLPG 220 (316)
T ss_pred HHHHHHHHHhcCCceeecccCccccccchhHHHHHHHHcCCeEEEecCccccccCCCcCCC
Confidence 9999999998 69999999999999877777999999999999999999999999996653
|
|
| >KOG1575 consensus Voltage-gated shaker-like K+ channel, subunit beta/KCNAB [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-53 Score=359.39 Aligned_cols=223 Identities=46% Similarity=0.747 Sum_probs=202.0
Q ss_pred CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCC
Q 026625 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (235)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~ 84 (235)
+.|+|+++|++|++||++|||||.+.. |+...+++++.++++.|+++|+|+||||+.||.|.||..+|++|++ .+|+
T Consensus 10 ~~~~~~~lg~~gl~Vs~lglG~m~~~~-~~~~~~~e~a~~~m~~a~e~Gin~fDtAe~Yg~~~~E~llg~~i~~~~~~R~ 88 (336)
T KOG1575|consen 10 LGMLRRKLGNSGLKVSPLGLGCMGWTT-FGGQIDKEEAFELLDHAYEAGINFFDTAEVYGNGQSEELLGEFIKSRGWRRD 88 (336)
T ss_pred hcceeeeccCCCceecceeecceeeec-cccCCCHHHHHHHHHHHHHcCCCEEehhhhcCCcccHHHHHHHHHhcCCcCC
Confidence 468999999999999999999985544 5555799999999999999999999999999999999999999999 7899
Q ss_pred CEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCC
Q 026625 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (235)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn 164 (235)
+++|+||++.... +......++..+..+++.|+++|+++|||+|++||+|+..++++++++|.+++++|+|++||+|+
T Consensus 89 ~vviaTK~~~~~~--~~~~~G~~~~~i~~~~~~s~~rl~~~~IDl~q~Hr~D~~~piee~m~aL~~lve~Gki~yiGlSe 166 (336)
T KOG1575|consen 89 KVVIATKFGFDYG--GETPRGLSRKHIIEGVRDSLRRLQTDYIDLLQVHRWDPMVPIEETMRALTDLVEQGKIRYWGLSE 166 (336)
T ss_pred cEEEEEEEeccCC--CcCCCCCcHHHHHHHHHHHHHhcCCCeeEEEEEcccCCCCCHHHHHHHHHHHHhcCceEEEEecc
Confidence 9999999987662 12245667889999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCC--eeEEeeccCccccccc-chHHHHHHHhCCeEEecccCccccCCCCCC-CCCCCCCC
Q 026625 165 ASPDTIRRAHAVHP--ITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGKAV-VESVPLDS 232 (235)
Q Consensus 165 ~~~~~l~~~~~~~~--~~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~~~-~~~~~~~~ 232 (235)
++.+++.++....+ ++++|++||++.|+.+ .++++.|++.||++++||||++|+|||++. .++.|.+.
T Consensus 167 ~sa~~I~~a~~~~~~p~~s~Q~eysl~~Rd~ee~~i~~~c~~~Gi~li~ysPL~~G~Ltgk~~~~e~~~~~~ 238 (336)
T KOG1575|consen 167 WSAEEIREAHAVAPIPIVAVQVEYSLLSRDKEERGIIPLCRELGIGLIAWSPLGRGLLTGKYKLGEDSRNGD 238 (336)
T ss_pred CCHHHHHHHHHhcCCCceEeeeechhhhcchhhhhHHHHHHHcCcceEEecccccceeccCccccccccccc
Confidence 99999999998876 9999999999999855 669999999999999999999999999943 46666654
|
|
| >TIGR01293 Kv_beta voltage-dependent potassium channel beta subunit, animal | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-50 Score=347.20 Aligned_cols=210 Identities=30% Similarity=0.478 Sum_probs=183.8
Q ss_pred ceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCEEE
Q 026625 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQV 88 (235)
Q Consensus 11 ~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~~I 88 (235)
||+||++|++||+||||||++ +|...+.+++.++|+.|+++|||+||||+.||.|.||+.+|++|+. .+|++++|
T Consensus 1 ~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~a~~~l~~al~~Gi~~~DTA~~Yg~g~sE~~lG~~l~~~~~~R~~~~i 77 (317)
T TIGR01293 1 YRNLGKSGLRVSCLGLGTWVT---FGGQISDEMAEQLLTLAYENGINLFDTAEVYAAGKAEVVLGNILKKKGWRRSSYVI 77 (317)
T ss_pred CcccCCCCCeecceeecCCcc---CCCCCCHHHHHHHHHHHHHcCCCeEECccccCCCccHHHHHHHHHhcCCCcccEEE
Confidence 578999999999999999974 2223578899999999999999999999999999999999999985 36999999
Q ss_pred EeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCCCHH
Q 026625 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPD 168 (235)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~ 168 (235)
+||+++.... ......+++.+++++++||++||+||||+|++|+|++..+++++|++|++|+++|+||+||||||+.+
T Consensus 78 aTK~~~~~~~--~~~~~~~~~~i~~~~~~SL~rL~td~iDl~~lH~~~~~~~~~e~~~aL~~l~~~G~ir~iGvSn~~~~ 155 (317)
T TIGR01293 78 TTKIFWGGKA--ETERGLSRKHIIEGLKASLERLQLEYVDIVFANRPDPNTPMEETVRAMTYVINQGMAMYWGTSRWSSM 155 (317)
T ss_pred EeeeccCCCC--CCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEeccCCCCCCHHHHHHHHHHHHHcCCeeEEEecCCCHH
Confidence 9998542110 01124579999999999999999999999999999988888999999999999999999999999999
Q ss_pred HHHHHHhc------CCeeEEeeccCcccccc-cchHHHHHHHhCCeEEecccCccccCCCCCCC
Q 026625 169 TIRRAHAV------HPITAVQLEWSLWARDI-ENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (235)
Q Consensus 169 ~l~~~~~~------~~~~~~q~~~n~~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~ 225 (235)
+++++... .+++++|++||++++.. +.+++++|+++||++++|+||++|+|++++.+
T Consensus 156 ~l~~~~~~~~~~~~~~~~~~Q~~~~l~~r~~~e~~l~~~~~~~gi~v~a~spl~~G~Ltg~~~~ 219 (317)
T TIGR01293 156 EIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELYHKIGVGAMTWSPLACGLVSGKYDS 219 (317)
T ss_pred HHHHHHHHHHHcCCCCcceeccccChHhcchhHHHHHHHHHHcCCeEEEeccccccccCCCCCC
Confidence 98876532 46789999999999874 56899999999999999999999999998643
|
Plant beta subunits and their closely related bacterial homologs (in Deinococcus radiudurans, Xylella fastidiosa, etc.) appear more closely related to each other than to animal forms. However, the bacterial species lack convincing counterparts the Kv alpha subunit and the Kv beta homolog may serve as an enzyme. Cutoffs are set for this model such that yeast and plant forms and bacterial close homologs score between trusted and noise cutoffs. |
| >PRK09912 L-glyceraldehyde 3-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-50 Score=348.50 Aligned_cols=215 Identities=29% Similarity=0.532 Sum_probs=186.2
Q ss_pred cCCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCC--CcHHHHHHHHHhc---
Q 026625 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP--YTNEILLGKALKE--- 80 (235)
Q Consensus 6 ~~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g~sE~~lG~al~~--- 80 (235)
++.|++++||++|++||+||||||+. +|...+.+++.++|+.|+++|||+||||+.||+ |.+|+.+|++|++
T Consensus 10 ~~~m~~r~lg~tg~~vs~lglG~~~~---~g~~~~~~~~~~~l~~A~~~Gin~~DTA~~YG~~~g~sE~~lG~~l~~~~~ 86 (346)
T PRK09912 10 YGQMQYRYCGKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFA 86 (346)
T ss_pred CCCcceeecCCCCcccccccccCccc---cCCCCCHHHHHHHHHHHHHCCCCEEEChhhhCCCCCCcHHHHHHHHHhccc
Confidence 46799999999999999999999972 332336678899999999999999999999995 8999999999986
Q ss_pred CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE
Q 026625 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI 160 (235)
Q Consensus 81 ~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i 160 (235)
..|++++|+||++..... +......+++.+++++++||++||+||||+|++|+|+...+++++|++|++|+++||||+|
T Consensus 87 ~~Rd~~~I~TK~g~~~~~-~~~~~~~s~~~i~~~~e~SL~rLg~d~iDl~~lH~~~~~~~~~e~~~al~~l~~~GkIr~i 165 (346)
T PRK09912 87 AYRDELIISTKAGYDMWP-GPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYV 165 (346)
T ss_pred CCCCeEEEEEEecccCCC-CcCCCCCCHHHHHHHHHHHHHHHCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCeeEE
Confidence 269999999998753111 0111235799999999999999999999999999998888899999999999999999999
Q ss_pred EeCCCCHHHHHHHHhc-----CCeeEEeeccCccccccc-chHHHHHHHhCCeEEecccCccccCCCCCC
Q 026625 161 GLSEASPDTIRRAHAV-----HPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (235)
Q Consensus 161 GvSn~~~~~l~~~~~~-----~~~~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~~~ 224 (235)
|||||++++++++.+. .+++++|++||++++..+ .+++++|+++||++++|+||++|+|++++.
T Consensus 166 GvSn~~~~~~~~~~~~~~~~~~~~~~~Q~~ynll~~~~~~~~ll~~~~~~gI~via~spl~~G~Lt~~~~ 235 (346)
T PRK09912 166 GISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL 235 (346)
T ss_pred EecCCCHHHHHHHHHHHHhcCCCcEEeeccCCceecccchhhHHHHHHHcCceEEEehhhcCccccCCCC
Confidence 9999999988866542 467899999999998655 579999999999999999999999999854
|
|
| >PRK10625 tas putative aldo-keto reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-50 Score=346.87 Aligned_cols=217 Identities=27% Similarity=0.386 Sum_probs=184.9
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCC-------CCcHHHHHHHHHhc-
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG-------PYTNEILLGKALKE- 80 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-------~g~sE~~lG~al~~- 80 (235)
|++++||++|++||+||||||+||+ ..+++++.++|+.|+++|||+||||+.|| .|.||+.+|++|+.
T Consensus 1 m~~r~lg~t~~~vs~iglGt~~~g~----~~~~~~a~~~l~~al~~Gi~~~DTA~~Yg~~~~~~~~g~sE~~iG~aL~~~ 76 (346)
T PRK10625 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYIGNWLAKR 76 (346)
T ss_pred CCceecCCCCCccccEeEeccccCC----CCCHHHHHHHHHHHHHcCCCEEECccccCCCcCCCCCCchHHHHHHHHhhc
Confidence 6789999999999999999999874 24678999999999999999999999998 48899999999985
Q ss_pred CCCCCEEEEeccccccCCCcc---cccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-----------------CCC
Q 026625 81 LPRENIQVATKFGFVELGFTS---VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-----------------SVP 140 (235)
Q Consensus 81 ~~R~~~~I~tK~~~~~~~~~~---~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-----------------~~~ 140 (235)
.+|++++|+||++......+. .....+++.+++++++||++||+||||+|++|||+. ..+
T Consensus 77 ~~R~~v~i~TK~~~~~~~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~ 156 (346)
T PRK10625 77 GSREKLIIASKVSGPSRNNDKGIRPNQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_pred CCcceEEEEcccccCCcCCCCCcCCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEeeccCcccccccccccccccccCCCC
Confidence 469999999998632110000 012467999999999999999999999999999964 235
Q ss_pred HHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhc------CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccC
Q 026625 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV------HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~------~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl 214 (235)
+.++|++|++|+++|+||+||+|||+.+++++++.. ..+.++|++||++++..+.+++++|+++||++++||||
T Consensus 157 ~~e~~~aL~~l~~~GkIr~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~q~~y~l~~r~~~~~ll~~~~~~gi~via~spL 236 (346)
T PRK10625 157 LLETLDALAEQQRAGKIRYIGVSNETAFGVMRYLHLAEKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCHHHHHHHHHHHHHcCCCCcEEecCCCCcccccchhHHHHHHHHcCCeEEEeccc
Confidence 789999999999999999999999999988776532 35789999999999876678999999999999999999
Q ss_pred ccccCCCCCCCCCCC
Q 026625 215 GRGFFGGKAVVESVP 229 (235)
Q Consensus 215 ~~G~L~~~~~~~~~~ 229 (235)
++|+|++++.+...|
T Consensus 237 ~~G~Ltg~~~~~~~~ 251 (346)
T PRK10625 237 AFGTLTGKYLNGAKP 251 (346)
T ss_pred cCeeccCCCCCCCCC
Confidence 999999985444334
|
|
| >COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-50 Score=333.35 Aligned_cols=188 Identities=32% Similarity=0.553 Sum_probs=169.1
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCE
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENI 86 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~ 86 (235)
+++.++ ++|.+||.||||||++++ .+.+.+++.+|++.|+|+||||..|| ||+.+|+|+++ ++|+++
T Consensus 3 ~~~~~l-~~g~~iP~iGlGt~~~~~-------~~~~~~av~~Al~~Gyr~IDTA~~Yg---nE~~VG~aI~~s~v~Reel 71 (280)
T COG0656 3 KTKVTL-NNGVEIPAIGLGTWQIGD-------DEWAVRAVRAALELGYRLIDTAEIYG---NEEEVGEAIKESGVPREEL 71 (280)
T ss_pred Cceeec-CCCCcccCcceEeeecCC-------chhHHHHHHHHHHhCcceEecHhHhc---CHHHHHHHHHhcCCCHHHe
Confidence 346777 567889999999999764 23378999999999999999999999 99999999999 789999
Q ss_pred EEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCC--CCHHHHHHHHHHHHHcCCccEEEeCC
Q 026625 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS--VPIEETIGEMKKLVEEGKIKYIGLSE 164 (235)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~--~~~~~~~~~l~~l~~~G~ir~iGvSn 164 (235)
||+||+|... ..++.+.+++++||++||+||+|+|++|||.+. ..+.++|++|++++++|+||+|||||
T Consensus 72 FittKvw~~~---------~~~~~~~~a~e~Sl~rLg~dyvDLyLiHwP~~~~~~~~~etw~alE~l~~~G~ir~IGVSN 142 (280)
T COG0656 72 FITTKVWPSD---------LGYDETLKALEASLKRLGLDYVDLYLIHWPVPNKYVVIEETWKALEELVDEGLIRAIGVSN 142 (280)
T ss_pred EEEeecCCcc---------CCcchHHHHHHHHHHHhCCCceeEEEECCCCCccCccHHHHHHHHHHHHhcCCccEEEeeC
Confidence 9999999875 457889999999999999999999999999752 33789999999999999999999999
Q ss_pred CCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCcccc
Q 026625 165 ASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (235)
Q Consensus 165 ~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 218 (235)
|+.++++++++. ..|+++|++||++.+. .+++++|+++||.+++||||++|.
T Consensus 143 F~~~~L~~l~~~~~~~p~~NQIe~hp~~~q--~el~~~~~~~gI~v~AysPL~~g~ 196 (280)
T COG0656 143 FGVEHLEELLSLAKVKPAVNQIEYHPYLRQ--PELLPFCQRHGIAVEAYSPLAKGG 196 (280)
T ss_pred CCHHHHHHHHHhcCCCCceEEEEeccCCCc--HHHHHHHHHcCCEEEEECCccccc
Confidence 999999999876 4589999999999996 459999999999999999999654
|
|
| >cd06660 Aldo_ket_red Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-48 Score=328.97 Aligned_cols=208 Identities=43% Similarity=0.695 Sum_probs=189.2
Q ss_pred ceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCC-CCCEEEE
Q 026625 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIQVA 89 (235)
Q Consensus 11 ~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~-R~~~~I~ 89 (235)
+++||++|+.||+||||||+++..| .+.+++.++++.|++.|||+||||+.||+|.+|+.+|++|+..+ |++++|+
T Consensus 1 ~r~lg~tg~~vs~lg~G~~~~~~~~---~~~~~~~~~l~~A~~~Gi~~iDTA~~Yg~g~sE~~lG~al~~~~~R~~~~i~ 77 (285)
T cd06660 1 YRTLGKTGLKVSRLGLGTWQLGGGY---VDEEEAAAAVRAALDAGINFIDTADVYGDGESEELLGEALKERGPREEVFIA 77 (285)
T ss_pred CcccCCCCceecCcceeccccCCCC---CCHHHHHHHHHHHHHcCCCeEECccccCCCCCHHHHHHHHhccCCcCcEEEE
Confidence 5789999999999999999987655 47899999999999999999999999999999999999999855 9999999
Q ss_pred eccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCC-HHHHHHHHHHHHHcCCccEEEeCCCCHH
Q 026625 90 TKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSEASPD 168 (235)
Q Consensus 90 tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~-~~~~~~~l~~l~~~G~ir~iGvSn~~~~ 168 (235)
||++..... ....+++.+++++++||++||++|||+|++|+|+.... ..++|++|++++++|+||+||||||+.+
T Consensus 78 tK~~~~~~~----~~~~~~~~~~~~l~~sL~~L~~~~iDl~~lh~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~~ 153 (285)
T cd06660 78 TKVGPRPGD----GRDLSPEHIRRAVEESLKRLGTDYIDLYLLHWPDPDTPDIEETLRALEELVKEGKIRAIGVSNFSAE 153 (285)
T ss_pred eeecCCCCC----CCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCCHHHHHHHHHHHHHcCCccEEEeeCCCHH
Confidence 999865421 13467999999999999999999999999999987665 8899999999999999999999999999
Q ss_pred HHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCCCCC
Q 026625 169 TIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (235)
Q Consensus 169 ~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~ 225 (235)
.+.++... .+++++|++||++++..+.+++++|+++||++++|+||++|.|+++..+
T Consensus 154 ~l~~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~~~~~l~~g~l~~~~~~ 212 (285)
T cd06660 154 QLEEALAAAGVPPAVNQVEYNLLDRQAEEELLPYCREHGIGVIAYSPLAGGLLTGKYLP 212 (285)
T ss_pred HHHHHHHhhCCCceEEecccCcccCchHHHHHHHHHHcCcEEEEeccccCceecCCCCC
Confidence 99999887 8999999999999997655799999999999999999999999988543
|
AKRs are present in all phyla and are of importance to both health and industrial applications. Members have very distinct functions and include the prokaryotic 2,5-diketo-D-gluconic acid reductases and beta-keto ester reductases, the eukaryotic aldose reductases, aldehyde reductases, hydroxysteroid dehydrogenases, steroid 5beta-reductases, potassium channel beta-subunits and aflatoxin aldehyde reductases, among others. |
| >PLN02587 L-galactose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-48 Score=335.39 Aligned_cols=206 Identities=32% Similarity=0.543 Sum_probs=179.5
Q ss_pred ceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCEEE
Q 026625 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQV 88 (235)
Q Consensus 11 ~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~~I 88 (235)
||+||++|++||.||||||++|+.|+. .+++++.++++.|++.|||+||||+.||.|.+|+.+|++|++ .+|++++|
T Consensus 1 ~r~lg~t~~~vs~lglG~~~~g~~~~~-~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lG~al~~~~~~R~~v~I 79 (314)
T PLN02587 1 LRELGSTGLKVSSVGFGASPLGSVFGP-VSEEDAIASVREAFRLGINFFDTSPYYGGTLSEKVLGKALKALGIPREKYVV 79 (314)
T ss_pred CCcCCCCCCcccCcccccccccCCCCC-CCHHHHHHHHHHHHHcCCCEEECcCccCCCchHHHHHHHHHhCCCCcceEEE
Confidence 688999999999999999999876664 478899999999999999999999999999999999999997 47999999
Q ss_pred EeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCC---CCHHHHHHHHHHHHHcCCccEEEeCCC
Q 026625 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS---VPIEETIGEMKKLVEEGKIKYIGLSEA 165 (235)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~---~~~~~~~~~l~~l~~~G~ir~iGvSn~ 165 (235)
+||++.... ..+.+++.+++++++||++||+||||+|++|+|+.. ..+.++|++|++|+++||||+||+|||
T Consensus 80 ~TK~~~~~~-----~~~~~~~~i~~~~e~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvSn~ 154 (314)
T PLN02587 80 STKCGRYGE-----GFDFSAERVTKSVDESLARLQLDYVDILHCHDIEFGSLDQIVNETIPALQKLKESGKVRFIGITGL 154 (314)
T ss_pred EeccccCCC-----CCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCcchhhhHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 999974321 123579999999999999999999999999999642 346789999999999999999999999
Q ss_pred CHHHHHHHHhc-----CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCCC
Q 026625 166 SPDTIRRAHAV-----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKA 223 (235)
Q Consensus 166 ~~~~l~~~~~~-----~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~ 223 (235)
++++++.+... ..+..+|+.||+.++.. .+++++|+++||++++|+||++|+|+++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~ll~~~~~~gi~v~a~spl~~G~L~~~~ 216 (314)
T PLN02587 155 PLAIFTYVLDRVPPGTVDVILSYCHYSLNDSSL-EDLLPYLKSKGVGVISASPLAMGLLTENG 216 (314)
T ss_pred CHHHHHHHHHhhhcCCCCeEEeccccCcchhhH-HHHHHHHHHcCceEEEechhhccccCCCC
Confidence 99888776653 23445678899887643 58999999999999999999999999874
|
|
| >KOG1577 consensus Aldo/keto reductase family proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-47 Score=312.70 Aligned_cols=186 Identities=31% Similarity=0.480 Sum_probs=170.0
Q ss_pred ceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------CCCC
Q 026625 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPRE 84 (235)
Q Consensus 11 ~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~~R~ 84 (235)
+.+| ++|.++|.||||||+. +..++.++++.|++.|+||||||..|+ +|+.+|+||++ ++|+
T Consensus 6 ~~~L-n~G~~mP~iGlGTw~~--------~~~~~~~aV~~Al~~GYRHIDtA~~Y~---NE~evG~aik~~i~~~~v~Re 73 (300)
T KOG1577|consen 6 TVKL-NNGFKMPIIGLGTWQS--------PPGQVAEAVKAAIKAGYRHIDTAHVYG---NEKEVGEAIKELLAEGGVKRE 73 (300)
T ss_pred eEec-cCCCccceeeeEeccc--------ChhhHHHHHHHHHHhCcceeechhhhC---ChHHHHHHHHHHhhhCCcchh
Confidence 6788 8999999999999872 568899999999999999999999999 99999999996 6899
Q ss_pred CEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCC----------------CCHHHHHHHH
Q 026625 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS----------------VPIEETIGEM 148 (235)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~----------------~~~~~~~~~l 148 (235)
++||+||+|... ..++.++.++++||++||+||+|+|++|||-.. .+..++|++|
T Consensus 74 diFiTSKlw~~~---------~~~~~v~~al~~sLk~L~ldYvDLyLiH~P~~~k~~~~~~~~~~~~~~~~~~~~tW~am 144 (300)
T KOG1577|consen 74 DIFITSKLWPTD---------HAPELVEKALEKSLKKLQLDYVDLYLIHWPVAFKDSFPKDENGKVNYDDVDRIETWKAM 144 (300)
T ss_pred hheeeeccCccc---------cChhhHHHHHHHHHHHhChhhhheeeEecccccCCCCCcccccccccccchHHHHHHHH
Confidence 999999999764 358899999999999999999999999999543 3467899999
Q ss_pred HHHHHcCCccEEEeCCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccC
Q 026625 149 KKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219 (235)
Q Consensus 149 ~~l~~~G~ir~iGvSn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 219 (235)
++++++|++|+||||||+..++++++.. .+|.++|++|+++.+. +++++||+++||.|.|||||+++--
T Consensus 145 E~~~~~Gl~rsIGVSNF~~~~le~ll~~~ki~P~vnQvE~HP~~~Q--~~L~~fCk~~~I~v~AYSpLg~~~~ 215 (300)
T KOG1577|consen 145 EKLVDEGLVRSIGVSNFNIKQLEELLNLAKIKPAVNQVECHPYLQQ--KKLVEFCKSKGIVVTAYSPLGSPGR 215 (300)
T ss_pred HHHHHcCCceEeeeecCCHHHHHHHHhcCCCCCccceeeccCCcCh--HHHHHHHhhCCcEEEEecCCCCCCC
Confidence 9999999999999999999999999987 6789999999998874 7899999999999999999997753
|
|
| >PRK10376 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-46 Score=314.31 Aligned_cols=203 Identities=28% Similarity=0.481 Sum_probs=174.7
Q ss_pred ceecCCCCcccCcceeccccCCC--CCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEE
Q 026625 11 RVKLGTQGLEVSKLGYGCMSLSG--CYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQV 88 (235)
Q Consensus 11 ~~~lg~~g~~vs~lg~G~~~~~~--~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I 88 (235)
+.+|+ |++||+||||||++++ .||...+++++.++|+.|++.|||+||||+.||+|.+|+.+|++++ ..|++++|
T Consensus 9 ~~~l~--g~~vs~iglG~~~lg~~~~~g~~~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~~~sE~~lg~~l~-~~R~~~~i 85 (290)
T PRK10376 9 TFTLG--GRSVNRLGYGAMQLAGPGVFGPPKDRDAAIAVLREAVALGVNHIDTSDFYGPHVTNQLIREALH-PYPDDLTI 85 (290)
T ss_pred ceecC--CeeecccceeccccCCCCcCCCCCCHHHHHHHHHHHHHcCCCeEEChhhcCCCcHHHHHHHHHh-cCCCeEEE
Confidence 34563 9999999999999975 3665557889999999999999999999999999999999999997 36999999
Q ss_pred EeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-----CCCHHHHHHHHHHHHHcCCccEEEeC
Q 026625 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-----SVPIEETIGEMKKLVEEGKIKYIGLS 163 (235)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-----~~~~~~~~~~l~~l~~~G~ir~iGvS 163 (235)
+||++.............+++.+++++++||++||+||||+|++|+++. ..++.+.|++|++|+++||||+||||
T Consensus 86 ~TK~g~~~~~~~~~~~~~~~~~i~~~~e~SL~rL~td~iDl~~~H~~~~~h~p~~~~~~~~~~~l~~l~~~Gkir~iGvS 165 (290)
T PRK10376 86 VTKVGARRGEDGSWLPAFSPAELRRAVHDNLRNLGLDVLDVVNLRLMGDGHGPAEGSIEEPLTVLAELQRQGLVRHIGLS 165 (290)
T ss_pred EeeecccCCCCCccCCCCCHHHHHHHHHHHHHHhCCCeEEEEEEeccCCCCCCCCCCHHHHHHHHHHHHHCCceeEEEec
Confidence 9998753311111123467999999999999999999999999887421 23578899999999999999999999
Q ss_pred CCCHHHHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccc
Q 026625 164 EASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 164 n~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G 217 (235)
||+.++++++.+..+++++|++||++++.. .+++++|+++||++++|+||+++
T Consensus 166 n~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~~~~~~~~~gi~v~a~~pL~g~ 218 (290)
T PRK10376 166 NVTPTQVAEARKIAEIVCVQNHYNLAHRAD-DALIDALARDGIAYVPFFPLGGF 218 (290)
T ss_pred CCCHHHHHHHHhhCCeEEEecccCCCcCCh-HHHHHHHHHcCCEEEEeecCCCC
Confidence 999999999988889999999999999763 67999999999999999999843
|
|
| >PF00248 Aldo_ket_red: Aldo/keto reductase family; InterPro: IPR023210 The aldo-keto reductase family includes a number of related monomeric NADPH-dependent oxidoreductases, such as aldehyde reductase, aldose reductase, prostaglandin F synthase, xylose reductase, rho crystallin, and many others [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-46 Score=313.86 Aligned_cols=196 Identities=38% Similarity=0.624 Sum_probs=171.2
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCEEEEeccccccCCCc
Q 026625 23 KLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVELGFT 100 (235)
Q Consensus 23 ~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~~I~tK~~~~~~~~~ 100 (235)
+||||||++++. ..+.+++.++++.|++.|||+||||+.||.|.+|+.+|++|+. .+|++++|+||+....
T Consensus 1 ~l~lG~~~~~~~---~~~~~~~~~~l~~a~~~Gin~~DtA~~Y~~g~sE~~lg~~l~~~~~~r~~~~i~tK~~~~~---- 73 (283)
T PF00248_consen 1 PLGLGTWRLGGE---RVSEEEAEAILRRALEAGINFFDTADSYGNGRSERILGRALRKSRVPRDDIFISTKVYGDG---- 73 (283)
T ss_dssp SBEEECTTBTTT---TSTHHHHHHHHHHHHHTT--EEEECGGGGGGTHHHHHHHHHHHTSSTGGGSEEEEEEESSS----
T ss_pred CEEEEccccCCC---CCCHHHHHHHHHHHHHcCCCeeccccccccccccccccccccccccccccccccccccccc----
Confidence 589999998753 4689999999999999999999999999999999999999998 7899999999992211
Q ss_pred ccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCC-HHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHH--HhcC
Q 026625 101 SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA--HAVH 177 (235)
Q Consensus 101 ~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~-~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~--~~~~ 177 (235)
......+++.+++++++||++||+||||+|++|+|+.... ..++|++|++|+++|+||+||||||+++.++++ ....
T Consensus 74 ~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~ 153 (283)
T PF00248_consen 74 KPEPDYSPDSIRESLERSLERLGTDYIDLLLLHWPDPSEDALEEVWEALEELKKEGKIRHIGVSNFSPEQLEAALKIGSI 153 (283)
T ss_dssp STGGGSSHHHHHHHHHHHHHHHTSSSEEEEEESSSSTTSSHHHHHHHHHHHHHHTTSEEEEEEES--HHHHHHHHTCTSS
T ss_pred cccccccccccccccccccccccccchhccccccccccccccchhhhhhhhccccccccccccccccccccccccccccc
Confidence 2344578999999999999999999999999999999888 899999999999999999999999999999999 4557
Q ss_pred CeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCCCCC
Q 026625 178 PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (235)
Q Consensus 178 ~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~ 225 (235)
+++++|++||++++....+++++|+++||++++|+||++|+|+++...
T Consensus 154 ~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~~~l~~G~l~~~~~~ 201 (283)
T PF00248_consen 154 PPDVVQINYNLLNRREEEGLLEFCREHGIGVIAYSPLAGGLLTGKYKS 201 (283)
T ss_dssp -ESEEEEE-BTTBHBGGHHHHHHHHHTT-EEEEESTTGGGCGGTTTTT
T ss_pred cccccccccccccccccccccccccccccccccccccccCcccccccc
Confidence 899999999999776678999999999999999999999999998543
|
All possess a similar structure, with a beta-alpha-beta fold characteristic of nucleotide binding proteins []. The fold comprises a parallel beta-8/alpha-8-barrel, which contains a novel NADP-binding motif. The binding site is located in a large, deep, elliptical pocket in the C-terminal end of the beta sheet, the substrate being bound in an extended conformation. The hydrophobic nature of the pocket favours aromatic and apolar substrates over highly polar ones []. Binding of the NADPH coenzyme causes a massive conformational change, reorienting a loop, effectively locking the coenzyme in place. This binding is more similar to FAD- than to NAD(P)-binding oxidoreductases []. Some proteins of this entry contain a K+ ion channel beta chain regulatory domain; these are reported to have oxidoreductase activity []. This entry represents the NADP-dependent oxidoreductase domain found in these proteins.; PDB: 1C9W_A 4F40_B 1VBJ_A 1XGD_A 1X97_A 2ACS_A 1EF3_A 2ACU_A 1PWM_A 2NVD_A .... |
| >PRK14863 bifunctional regulator KidO; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-45 Score=310.46 Aligned_cols=191 Identities=20% Similarity=0.234 Sum_probs=168.0
Q ss_pred CcccCcceeccccCCCC-------CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEe
Q 026625 18 GLEVSKLGYGCMSLSGC-------YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVAT 90 (235)
Q Consensus 18 g~~vs~lg~G~~~~~~~-------~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~t 90 (235)
+++||+||||||+||+. |+. .+++++.++|+.|++.|||+||||+.|| .||+.+|++|+...+++++|+|
T Consensus 2 ~~~vs~iglGt~~~g~~~~~~~~~~~~-~~~~ea~~~l~~A~~~Gin~~DTA~~YG--~SE~~lG~al~~~~~~~~~i~t 78 (292)
T PRK14863 2 SSPVSKLGLAAAQFGLDPGSSSAPRGR-TPEAEARDILNIAARAGLSVLDASGLFG--RAETVLGQLIPRPVPFRVTLST 78 (292)
T ss_pred CCcceeeeeeeeccCCCcccccCCCCC-CCHHHHHHHHHHHHHcCCCEEecchhhh--hHHHHHhhhhccCCceEeeccc
Confidence 57899999999999863 343 5889999999999999999999999997 6999999999843345788888
Q ss_pred ccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCC-CCH-HHHHHHHHHHHHcCCccEEEeCCCCHH
Q 026625 91 KFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPI-EETIGEMKKLVEEGKIKYIGLSEASPD 168 (235)
Q Consensus 91 K~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~-~~~-~~~~~~l~~l~~~G~ir~iGvSn~~~~ 168 (235)
|.. ..+++.+++++++||++||+||||+|++|+|+.. .+. .++|++|++|+++||||+||||||+++
T Consensus 79 k~~-----------~~~~~~i~~~~e~SL~rLg~d~iDl~~lH~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvSn~~~~ 147 (292)
T PRK14863 79 VRA-----------DRGPDFVEAEARASLRRMGVERADAILVHSPTELFGPHGAALWERLQALKDQGLFAKIGVSAHASD 147 (292)
T ss_pred ccc-----------cccHHHHHHHHHHHHHHhCCCccCeEEEeCchhhcCcchHHHHHHHHHHHHcCCcceEeeeccCHH
Confidence 842 1357899999999999999999999999999763 233 578999999999999999999999999
Q ss_pred HHHHHHhcCCeeEEeeccCccccccc-chHHHHHHHhCCeEEecccCccccCCCC
Q 026625 169 TIRRAHAVHPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (235)
Q Consensus 169 ~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~ 222 (235)
++.++....+++++|++||++++..+ .+++++|+++||++++|+||++|+|++.
T Consensus 148 ~~~~~~~~~~~~~~Q~~~n~l~~~~~~~~~l~~~~~~gi~v~a~spl~~G~L~~~ 202 (292)
T PRK14863 148 DPVGVARRFKPDILQAPASLLDQRLLADGSLQRIAGMGVEVHLRSIFLNGLLFLP 202 (292)
T ss_pred HHHHHHhcCCCCEEEecCCcccccccccchHHHHHhCCCEEEEechhhCccccCC
Confidence 99888877899999999999998654 4799999999999999999999999864
|
|
| >PRK11172 dkgB 2,5-diketo-D-gluconate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-45 Score=304.59 Aligned_cols=180 Identities=26% Similarity=0.420 Sum_probs=161.4
Q ss_pred ccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCEEEEeccccccC
Q 026625 20 EVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVEL 97 (235)
Q Consensus 20 ~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~~I~tK~~~~~~ 97 (235)
+||+||||||+++ .+++.++++.|++.|||+||||+.|| +|+.+|++|+. .+|++++|+||++..
T Consensus 2 ~vs~lglGt~~~~--------~~~~~~~i~~A~~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~v~i~TK~~~~-- 68 (267)
T PRK11172 2 SIPAFGLGTFRLK--------DQVVIDSVKTALELGYRAIDTAQIYD---NEAAVGQAIAESGVPRDELFITTKIWID-- 68 (267)
T ss_pred CCCCEeeEccccC--------hHHHHHHHHHHHHcCCCEEEccchhC---CHHHHHHHHHHcCCChhHeEEEEEeCCC--
Confidence 5899999999753 36789999999999999999999999 79999999986 479999999998532
Q ss_pred CCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCC--CCHHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHh
Q 026625 98 GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS--VPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHA 175 (235)
Q Consensus 98 ~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~--~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~ 175 (235)
..+++.+++++++||++||+||||+|++|+|++. .+..++|++|++|+++||||+||||||+.++++++++
T Consensus 69 -------~~~~~~~~~~~~~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~~ 141 (267)
T PRK11172 69 -------NLAKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQGLTREIGISNFTIALMKQAIA 141 (267)
T ss_pred -------CCCHHHHHHHHHHHHHHhCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEccCCHHHHHHHHH
Confidence 2468899999999999999999999999999763 4678999999999999999999999999999998876
Q ss_pred c---CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCC
Q 026625 176 V---HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGG 221 (235)
Q Consensus 176 ~---~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 221 (235)
. .+++++|++||++++. .+++++|+++||+|++|+||++|.+..
T Consensus 142 ~~~~~~~~~~Q~~~~~~~~~--~~ll~~~~~~gi~v~a~spl~~G~~~~ 188 (267)
T PRK11172 142 AVGAENIATNQIELSPYLQN--RKVVAFAKEHGIHVTSYMTLAYGKVLK 188 (267)
T ss_pred hcCCCCCeEEeeecCCCCCc--HHHHHHHHHCCCEEEEECCCCCCcccC
Confidence 4 3689999999999874 689999999999999999999997654
|
|
| >COG4989 Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=288.49 Aligned_cols=210 Identities=30% Similarity=0.430 Sum_probs=189.6
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCE
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENI 86 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~ 86 (235)
|+++++++.++++|++.+|+|++.. |+- +..++...+++|++.|||+||-|+.||.+..|+.+|.+|+. .-|+++
T Consensus 1 m~rI~l~~~~~e~Sriv~G~wRl~d-~~~--~~~e~~~~Ie~~le~Gitt~DhADIYGgy~cE~~fg~aL~l~p~lReki 77 (298)
T COG4989 1 MQRITLAPDGLEFSRIVLGYWRLND-WNM--SARELLSFIETALELGITTFDHADIYGGYQCEALFGEALKLAPGLREKI 77 (298)
T ss_pred CceEEecCCCccHHHHHHHHHhhhh-ccC--CHHHHHHHHHHHHHcCcccchhhhhcCCccHHHHHHHHHhcChhhhhhe
Confidence 6789999999999999999999986 654 56889999999999999999999999999999999999997 469999
Q ss_pred EEEeccccccCCC---cccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeC
Q 026625 87 QVATKFGFVELGF---TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (235)
Q Consensus 87 ~I~tK~~~~~~~~---~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS 163 (235)
.|.||++...+.. .....+.+.++|..++++||.+|++||+|++++|+||+..+.+++.+++..|.+.||||++|||
T Consensus 78 eivsKCGI~~~s~~~~~~~hydts~~HI~~SVe~SL~~L~tDylD~LLiHRPDpLmd~eeVAeAf~~L~~sGKVr~fGVS 157 (298)
T COG4989 78 EIVSKCGIRLPSREEPRIGHYDTSKEHIIKSVEQSLINLKTDYLDLLLIHRPDPLMDAEEVAEAFTHLHKSGKVRHFGVS 157 (298)
T ss_pred EeeeccccccccccccccccccCcHHHHHHHHHHHHHHhccchhhhhhccCCcccCCHHHHHHHHHHHHhcCCeeeeecC
Confidence 9999999876432 1134577999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhc--CCeeEEeeccCccccccc-chHHHHHHHhCCeEEecccCccccCCC
Q 026625 164 EASPDTIRRAHAV--HPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGG 221 (235)
Q Consensus 164 n~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~ 221 (235)
||++.+++-+.+. .++++||++.|+++...- ++.+++|+++.|.+++||||++|-+..
T Consensus 158 Nf~p~Q~~LL~s~l~~~LvtNQlelS~~~~~~~~DGtLd~~q~~~v~pmaWSpl~gG~~F~ 218 (298)
T COG4989 158 NFNPAQFELLQSRLPFTLVTNQLELSPLHTPMLLDGTLDYCQQLRVRPMAWSPLGGGGLFL 218 (298)
T ss_pred CCCHHHHHHHHHhccchhhhcceeeccccccccccchHHHHHHcCCCcccccccCCCcccc
Confidence 9999999888766 458999999999998643 789999999999999999999985443
|
|
| >KOG1576 consensus Predicted oxidoreductase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-44 Score=286.05 Aligned_cols=227 Identities=29% Similarity=0.481 Sum_probs=195.9
Q ss_pred cccCCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCC
Q 026625 4 DKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPR 83 (235)
Q Consensus 4 ~~~~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R 83 (235)
.||..|.+|.+|+||++||+++||+..++..|+. .++++....+..|++.|||+||||+.||.+++|..+|.+++++||
T Consensus 17 ~~vrrmeyR~lg~tgl~VSk~~fGga~L~~~fgd-~~~e~~i~tv~eA~k~GINyiDTsp~Ygqs~se~~lg~al~~vPR 95 (342)
T KOG1576|consen 17 EKVRRMEYRQLGSTGLRVSKLGFGGAALGQLFGD-EDEEEGILTVIEAFKSGINYIDTSPYYGQSRSEEGLGLALKDVPR 95 (342)
T ss_pred HHHHHHHHhhcCCCcceeeeeeecchhhhhhcCC-cchhhhHHHHHHHHHccccceecCcccCcchhHHHHHHHHhhCCh
Confidence 5677899999999999999999999999998887 477787777777999999999999999999999999999999999
Q ss_pred CCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCC----CCHHHHHHHHHHHHHcCCccE
Q 026625 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS----VPIEETIGEMKKLVEEGKIKY 159 (235)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~----~~~~~~~~~l~~l~~~G~ir~ 159 (235)
+.++|+||++....+ .....+++++.+++++++||+||++||+|++++|..+.. ..+.|++.+|++++++||||+
T Consensus 96 ~aYyIaTKvgRy~ld-~~~~FdfsadkvreSv~rSlerLqldyvDilqiHDvefap~ld~vl~Etlp~Le~lk~~Gk~Rf 174 (342)
T KOG1576|consen 96 EAYYIATKVGRYELD-YANMFDFSADKVRESVKRSLERLQLDYVDILQIHDVEFAPNLDIVLNETLPALEELKQEGKIRF 174 (342)
T ss_pred hheeeeeeeeecccC-ccccccchHHHHHHHHHHHHHHhCCceeEEEEeecccccccccHHHHHHHHHHHHHHhcCceeE
Confidence 999999999876533 123467899999999999999999999999999987654 235689999999999999999
Q ss_pred EEeCCCCHHHHHHHHhc--CCeeEEe--eccCcccccccchHHHHHHHhCCeEEecccCccccCCCCCCCCCCCCCCC
Q 026625 160 IGLSEASPDTIRRAHAV--HPITAVQ--LEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSF 233 (235)
Q Consensus 160 iGvSn~~~~~l~~~~~~--~~~~~~q--~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~ 233 (235)
||++.++.+-+.++.+. +.++++- .+|++.+... -..+++.+++|++|+..++++.|+|+.+-.++..|..+.
T Consensus 175 iGitgypldvl~~~ae~~~G~~dvvlsY~ry~l~d~tL-l~~~~~~~sk~vgVi~AsalsmgLLt~~gp~~wHPaS~E 251 (342)
T KOG1576|consen 175 IGITGYPLDVLTECAERGKGRLDVVLSYCRYTLNDNTL-LRYLKRLKSKGVGVINASALSMGLLTNQGPPPWHPASDE 251 (342)
T ss_pred eeecccchHHHHHHHhcCCCceeeehhhhhhccccHHH-HHHHHHHHhcCceEEehhhHHHHHhhcCCCCCCCCCCHH
Confidence 99999999999998876 4466666 4555555432 467788889999999999999999999977788887553
|
|
| >PRK11565 dkgA 2,5-diketo-D-gluconate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=290.61 Aligned_cols=183 Identities=30% Similarity=0.376 Sum_probs=163.3
Q ss_pred ceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCEEE
Q 026625 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQV 88 (235)
Q Consensus 11 ~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~~I 88 (235)
+.+| ++|+.||.||||||++ +.+++.++++.|++.|+|+||||+.|| +|+.+|++|+. .+|++++|
T Consensus 6 ~~~l-~~g~~v~~lglG~~~~--------~~~~~~~~l~~A~~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~~~i 73 (275)
T PRK11565 6 VIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIHKALEVGYRSIDTAAIYK---NEEGVGKALKEASVAREELFI 73 (275)
T ss_pred eEEc-CCCCccCCcceECccC--------CHHHHHHHHHHHHHhCCCEEEchhhhC---CHHHHHHHHHHcCCCHHHEEE
Confidence 4667 7899999999999874 357899999999999999999999998 79999999986 46999999
Q ss_pred EeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCC-CHHHHHHHHHHHHHcCCccEEEeCCCCH
Q 026625 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSV-PIEETIGEMKKLVEEGKIKYIGLSEASP 167 (235)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~-~~~~~~~~l~~l~~~G~ir~iGvSn~~~ 167 (235)
+||++.. +++.+++++++||++||+||||+|++|+|++.. +..++|++|++|+++|+||+||||||++
T Consensus 74 ~tK~~~~-----------~~~~~~~~~~~sL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~ 142 (275)
T PRK11565 74 TTKLWND-----------DHKRPREALEESLKKLQLDYVDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQI 142 (275)
T ss_pred EEEecCc-----------chHHHHHHHHHHHHHhCCCceEEEEecCCCCCcCcHHHHHHHHHHHHHcCCeeEEeeccCCH
Confidence 9998632 367899999999999999999999999997653 4679999999999999999999999999
Q ss_pred HHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCcccc
Q 026625 168 DTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (235)
Q Consensus 168 ~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 218 (235)
++++++... ..+.++|++||++.+. .+++++|+++||.+++|+||++|.
T Consensus 143 ~~l~~~~~~~~v~~~~~Q~~~~~~~~~--~~~~~~~~~~~i~~~a~spl~~G~ 193 (275)
T PRK11565 143 HHLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLAQGG 193 (275)
T ss_pred HHHHHHHHhCCCCceeeeeecCCccch--HHHHHHHHHCCCEEEEEccCCCCC
Confidence 999998754 3578999999998874 679999999999999999999773
|
|
| >COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=291.57 Aligned_cols=205 Identities=29% Similarity=0.383 Sum_probs=186.4
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEE
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQV 88 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I 88 (235)
|.||++|++|.++|.+|||||++...|...+|++.+.++|+.|++.|||+||||..|..|.||..+|+||+...|+++++
T Consensus 1 Mlyr~~~k~g~~~s~lgfG~MRlp~~~~~~id~~~~~~~i~~aie~GiNyidTA~~Yh~g~sE~~lgkaL~~~~Rekv~L 80 (391)
T COG1453 1 MLYRKFPKTGDELSILGFGCMRLPLKEQGSIDEENANETIDYAIEHGINYIDTAWPYHGGESEEFLGKALKDGYREKVKL 80 (391)
T ss_pred CchhhcCCCCcccceeccceeecccccCCCccHHHHHHHHHHHHHcCCceEeecccccCCCchHHHHHHhhhcccceEEE
Confidence 78999999999999999999999987877789999999999999999999999999977799999999999988999999
Q ss_pred EeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHH-----HHHHHHHHHHHcCCccEEEeC
Q 026625 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIE-----ETIGEMKKLVEEGKIKYIGLS 163 (235)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~-----~~~~~l~~l~~~G~ir~iGvS 163 (235)
+||+..... -+++.+++-++++|++|++||+|+|++|.... ..++ ..++.+++++++|+||++|+|
T Consensus 81 aTKlp~~~~--------~~~edm~r~fneqLekl~~Dy~D~yliH~l~~-e~~~k~~~~g~~df~~kak~eGkIr~~GFS 151 (391)
T COG1453 81 ATKLPSWPV--------KDREDMERIFNEQLEKLGTDYIDYYLIHGLNT-ETWEKIERLGVFDFLEKAKAEGKIRNAGFS 151 (391)
T ss_pred EeecCCccc--------cCHHHHHHHHHHHHHHhCCchhhhhhhccccH-HHHHHHHccChHHHHHHHHhcCcEEEeeec
Confidence 999974331 36889999999999999999999999999976 3332 369999999999999999999
Q ss_pred CCC-HHHHHHHHhcCCeeEEeeccCccccccc--chHHHHHHHhCCeEEecccCccccCCCC
Q 026625 164 EAS-PDTIRRAHAVHPITAVQLEWSLWARDIE--NEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (235)
Q Consensus 164 n~~-~~~l~~~~~~~~~~~~q~~~n~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~L~~~ 222 (235)
.|+ .+.+.+++...+++++|++||.++.... .+.+++|+++|++|+.++|+.+|-|+..
T Consensus 152 fHgs~e~~~~iv~a~~~dfvqlq~ny~d~~n~~~~~~l~~A~~~~~gI~IMeP~~gG~l~~~ 213 (391)
T COG1453 152 FHGSTEVFKEIVDAYPWDFVQLQYNYIDQKNQAGTEGLKYAASKGLGIFIMEPLDGGGLLYN 213 (391)
T ss_pred CCCCHHHHHHHHhcCCcceEEeeeeeeccchhcccHHHHHHHhCCCcEEEEeeCCCCCcccC
Confidence 997 4778889999999999999999998754 3899999999999999999999998874
|
|
| >KOG3023 consensus Glutamate-cysteine ligase regulatory subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.7e-06 Score=68.66 Aligned_cols=71 Identities=15% Similarity=0.208 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecc
Q 026625 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYC 212 (235)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~s 212 (235)
+.+.|+.|++++.+|+|..||||.|+..++++++.. ..|..+|++..-.+.- ..++.+||.+++|.+...|
T Consensus 155 lkplwk~LE~lv~~~kI~~lGvSDfda~qLe~Li~saqVvP~snqVnL~~cCvv-PpdLqafa~~hdiQLltHs 227 (285)
T KOG3023|consen 155 LKPLWKLLEELVGEGKIGTLGVSDFDANQLERLISSAQVVPESNQVNLGQCCVV-PPDLQAFADRHDIQLLTHS 227 (285)
T ss_pred HHHHHHHHHHHhccCceeeeeecccCHHHHHHHHhhhccccccceeeccccccC-CHHHHHHhhhcceeeeecC
Confidence 457899999999999999999999999999999987 4577888877665553 3799999999999999876
|
|
| >cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.37 Score=41.36 Aligned_cols=154 Identities=15% Similarity=0.110 Sum_probs=96.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCC-cHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPY-TNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g-~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 117 (235)
+.++..+.++.+.+.|++.|+.-- |.. ..+...=+++++ .+ ++-|.-+.... .+.+... .+-+
T Consensus 134 ~~~~~~~~~~~~~~~Gf~~iKik~--g~~~~~d~~~v~~lr~~~g--~~~l~vD~n~~----------~~~~~A~-~~~~ 198 (316)
T cd03319 134 TPEAMAAAAKKAAKRGFPLLKIKL--GGDLEDDIERIRAIREAAP--DARLRVDANQG----------WTPEEAV-ELLR 198 (316)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEe--CCChhhHHHHHHHHHHhCC--CCeEEEeCCCC----------cCHHHHH-HHHH
Confidence 567777888889999999998743 211 122223334444 33 55666665322 2333322 2334
Q ss_pred HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cc
Q 026625 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-EN 195 (235)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~ 195 (235)
.|+.++ +.++..|-+. .-++.+.+|++.-.|. ..|=+-++.+++.++++....+++|+..+.+-.-. -.
T Consensus 199 ~l~~~~-----l~~iEeP~~~----~d~~~~~~L~~~~~ipIa~~E~~~~~~~~~~~~~~~~~d~v~~~~~~~GGi~~~~ 269 (316)
T cd03319 199 ELAELG-----VELIEQPVPA----GDDDGLAYLRDKSPLPIMADESCFSAADAARLAGGGAYDGINIKLMKTGGLTEAL 269 (316)
T ss_pred HHHhcC-----CCEEECCCCC----CCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHhcCCCCEEEEeccccCCHHHHH
Confidence 455554 4444544322 3466778888877666 33446678999999999888999999866543211 26
Q ss_pred hHHHHHHHhCCeEEecccCccc
Q 026625 196 EIVPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 196 ~l~~~~~~~gi~v~a~spl~~G 217 (235)
.+..+|+++|+.++..+-+..+
T Consensus 270 ~~~~~a~~~gi~~~~~~~~~~~ 291 (316)
T cd03319 270 RIADLARAAGLKVMVGCMVESS 291 (316)
T ss_pred HHHHHHHHcCCCEEEECchhhH
Confidence 7899999999999986554433
|
The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily | Back alignment and domain information |
|---|
Probab=93.63 E-value=4.4 Score=35.32 Aligned_cols=154 Identities=13% Similarity=0.112 Sum_probs=91.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCC-----CcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGP-----YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSC 114 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-----g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~ 114 (235)
+.++..+.++.+.+.|++.|-.--..+. -..+...=+++++.-.+++.|.-.... ..+.+...+
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~~Kik~g~~~~~~~~~~~d~~~v~~ir~~~g~~~~l~vDaN~----------~~~~~~a~~- 207 (357)
T cd03316 139 SPEELAEEAKRAVAEGFTAVKLKVGGPDSGGEDLREDLARVRAVREAVGPDVDLMVDANG----------RWDLAEAIR- 207 (357)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCcchHHHHHHHHHHHHHHHhhCCCCEEEEECCC----------CCCHHHHHH-
Confidence 4677778888889999999865322221 011222223444422345555554421 123333332
Q ss_pred HHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc
Q 026625 115 CEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI 193 (235)
Q Consensus 115 ~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~ 193 (235)
.+++|. ..++.+++.|-+. +.++.+.++++.-.+. ..|=|.++++++.++++...++++|+...-.-.-.
T Consensus 208 ---~~~~l~--~~~i~~iEqP~~~----~~~~~~~~l~~~~~ipi~~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~ 278 (357)
T cd03316 208 ---LARALE--EYDLFWFEEPVPP----DDLEGLARLRQATSVPIAAGENLYTRWEFRDLLEAGAVDIIQPDVTKVGGIT 278 (357)
T ss_pred ---HHHHhC--ccCCCeEcCCCCc----cCHHHHHHHHHhCCCCEEeccccccHHHHHHHHHhCCCCEEecCccccCCHH
Confidence 233332 2345556655432 3567777888775555 33445678999999998888899999766543211
Q ss_pred -cchHHHHHHHhCCeEEeccc
Q 026625 194 -ENEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 194 -~~~l~~~~~~~gi~v~a~sp 213 (235)
-..+.+.|+++|+.++..+-
T Consensus 279 ~~~~i~~~a~~~g~~~~~~~~ 299 (357)
T cd03316 279 EAKKIAALAEAHGVRVAPHGA 299 (357)
T ss_pred HHHHHHHHHHHcCCeEeccCC
Confidence 26789999999999887654
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD). |
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
|---|
Probab=93.16 E-value=2.5 Score=33.67 Aligned_cols=150 Identities=18% Similarity=0.185 Sum_probs=95.9
Q ss_pred HHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHH--------
Q 026625 46 SIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA-------- 117 (235)
Q Consensus 46 ~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~-------- 117 (235)
++|..-++.|-+.+|-.-..| .+-+.|+.. +++. . ...+.+++.+.+++.+
T Consensus 5 ~~I~~~I~pgsrVLDLGCGdG------~LL~~L~~~--k~v~----g---------~GvEid~~~v~~cv~rGv~Viq~D 63 (193)
T PF07021_consen 5 QIIAEWIEPGSRVLDLGCGDG------ELLAYLKDE--KQVD----G---------YGVEIDPDNVAACVARGVSVIQGD 63 (193)
T ss_pred HHHHHHcCCCCEEEecCCCch------HHHHHHHHh--cCCe----E---------EEEecCHHHHHHHHHcCCCEEECC
Confidence 566777888999999887665 334555521 1111 0 1123456666666554
Q ss_pred ---HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHh-c-CCeeEEeeccCccccc
Q 026625 118 ---SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHA-V-HPITAVQLEWSLWARD 192 (235)
Q Consensus 118 ---sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~-~-~~~~~~q~~~n~~~~~ 192 (235)
.|....-+..|.+.+..- -..+..-.+.|+++.+-|+---|++.||.....+.-+- . .-|..-+++|+-++..
T Consensus 64 ld~gL~~f~d~sFD~VIlsqt--LQ~~~~P~~vL~EmlRVgr~~IVsFPNFg~W~~R~~l~~~GrmPvt~~lPy~WYdTP 141 (193)
T PF07021_consen 64 LDEGLADFPDQSFDYVILSQT--LQAVRRPDEVLEEMLRVGRRAIVSFPNFGHWRNRLQLLLRGRMPVTKALPYEWYDTP 141 (193)
T ss_pred HHHhHhhCCCCCccEEehHhH--HHhHhHHHHHHHHHHHhcCeEEEEecChHHHHHHHHHHhcCCCCCCCCCCCcccCCC
Confidence 344444445555555422 11233445667888888998889999998776655443 2 2355677888877753
Q ss_pred c-----cchHHHHHHHhCCeEEecccCcccc
Q 026625 193 I-----ENEIVPLCRELGIGIVPYCPLGRGF 218 (235)
Q Consensus 193 ~-----~~~l~~~~~~~gi~v~a~spl~~G~ 218 (235)
. -.++-++|++.|+.|.-..++..+.
T Consensus 142 Nih~~Ti~DFe~lc~~~~i~I~~~~~~~~~~ 172 (193)
T PF07021_consen 142 NIHLCTIKDFEDLCRELGIRIEERVFLDGGR 172 (193)
T ss_pred CcccccHHHHHHHHHHCCCEEEEEEEEcCCC
Confidence 2 2789999999999999999998766
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily | Back alignment and domain information |
|---|
Probab=92.58 E-value=5.4 Score=33.24 Aligned_cols=157 Identities=14% Similarity=0.146 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+.++.+.+.|++.|-.--.-. ...+...=+++++.-.+++.|.-.... ..+.+...+-+ +.|
T Consensus 85 ~~~~~~~~~~~~~~~G~~~~KiKvg~~-~~~d~~~v~~vr~~~g~~~~l~vDan~----------~~~~~~a~~~~-~~l 152 (265)
T cd03315 85 EPAEVAEEARRALEAGFRTFKLKVGRD-PARDVAVVAALREAVGDDAELRVDANR----------GWTPKQAIRAL-RAL 152 (265)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCC-HHHHHHHHHHHHHhcCCCCEEEEeCCC----------CcCHHHHHHHH-HHH
Confidence 456677788888999999887542111 012223334555422334444333221 12343333322 344
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cchH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~l 197 (235)
+.++ +.+++.|-+. +.++.+.++++.-.+. ..|=+-++..++.++++...++++|+..+..-.-. -..+
T Consensus 153 ~~~~-----i~~iEeP~~~----~d~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~~ 223 (265)
T cd03315 153 EDLG-----LDYVEQPLPA----DDLEGRAALARATDTPIMADESAFTPHDAFRELALGAADAVNIKTAKTGGLTKAQRV 223 (265)
T ss_pred HhcC-----CCEEECCCCc----ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEecccccCHHHHHHH
Confidence 4444 4445655432 2457777787775555 34446678899999988888999999876554311 2678
Q ss_pred HHHHHHhCCeEEecccCccc
Q 026625 198 VPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (235)
.+.|+++|+.++..+.+..|
T Consensus 224 ~~~A~~~gi~~~~~~~~~s~ 243 (265)
T cd03315 224 LAVAEALGLPVMVGSMIESG 243 (265)
T ss_pred HHHHHHcCCcEEecCccchH
Confidence 99999999999987665544
|
Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions. |
| >TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family | Back alignment and domain information |
|---|
Probab=90.30 E-value=5.6 Score=31.73 Aligned_cols=145 Identities=12% Similarity=0.030 Sum_probs=85.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc----CCCCCEEEEeccccccCCCcccccCCCHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~----~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~ 115 (235)
+++++.+.++.|++.|++..|.- +..+-.+++. +.++++++.-=. ...+.+++.+
T Consensus 10 d~~~~~~~v~~~l~~g~~~~~i~--------~~~l~p~m~~iG~~w~~gei~va~~~-------------~a~~~~~~~l 68 (197)
T TIGR02370 10 EEDDVVEGAQKALDAGIDPIELI--------EKGLMAGMGVVGKLFEDGELFLPHVM-------------MSADAMLAGI 68 (197)
T ss_pred CHHHHHHHHHHHHHcCCCHHHHH--------HHHHHHHHHHHHHHHcCCCccHHHHH-------------HHHHHHHHHH
Confidence 78999999999999998877643 2344444443 345555542211 1234455555
Q ss_pred HHHHHHcCC----CcccEEEeccCCCCCCHHHHHHHHHHHHHcCC-ccEEEeCCCCHHHHHHHHhcCCeeEEeeccCccc
Q 026625 116 EASLRRLDV----EYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWA 190 (235)
Q Consensus 116 ~~sL~~Lg~----~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~ 190 (235)
......+.. ..---+++-.+..+.+--...=.-.-|+..|. |.++|. +-+.+.+.+.+....++++.+.++...
T Consensus 69 ~~l~~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~-~vp~e~~v~~~~~~~pd~v~lS~~~~~ 147 (197)
T TIGR02370 69 KVLTPEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGR-DVPIDTVVEKVKKEKPLMLTGSALMTT 147 (197)
T ss_pred HHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCC-CCCHHHHHHHHHHcCCCEEEEcccccc
Confidence 444444431 11112344444333322233333334556775 777884 566788888888888899988877655
Q ss_pred cccc-chHHHHHHHhCC
Q 026625 191 RDIE-NEIVPLCRELGI 206 (235)
Q Consensus 191 ~~~~-~~l~~~~~~~gi 206 (235)
.... .++++.+++.|.
T Consensus 148 ~~~~~~~~i~~l~~~~~ 164 (197)
T TIGR02370 148 TMYGQKDINDKLKEEGY 164 (197)
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 5333 778899998854
|
This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere. |
| >PRK13958 N-(5'-phosphoribosyl)anthranilate isomerase; Provisional | Back alignment and domain information |
|---|
Probab=90.20 E-value=1.2 Score=35.87 Aligned_cols=67 Identities=13% Similarity=0.149 Sum_probs=46.8
Q ss_pred HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeC-CCCHHHHHHHHhcCCeeEEeecc
Q 026625 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLEW 186 (235)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS-n~~~~~l~~~~~~~~~~~~q~~~ 186 (235)
....+|.|++=+++...-....+.+.+-+....+ .+.++.+||. |.+++.+.++.+..+++++|++-
T Consensus 16 ~~~~~GaD~iGfIf~~~SpR~V~~~~a~~i~~~~--~~~~~~VgVf~~~~~~~i~~~~~~~~~d~vQLHG 83 (207)
T PRK13958 16 AASQLPIDAIGFIHYEKSKRHQTITQIKKLASAV--PNHIDKVCVVVNPDLTTIEHILSNTSINTIQLHG 83 (207)
T ss_pred HHHHcCCCEEEEecCCCCcccCCHHHHHHHHHhC--CCCCCEEEEEeCCCHHHHHHHHHhCCCCEEEECC
Confidence 3457999999997544333334444443333332 3568899995 88899999999989999999964
|
|
| >cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily | Back alignment and domain information |
|---|
Probab=89.76 E-value=3 Score=34.53 Aligned_cols=105 Identities=14% Similarity=0.112 Sum_probs=68.3
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcC-CccEEEeCCCCHHHHHHHHhcCCeeEEee
Q 026625 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLSEASPDTIRRAHAVHPITAVQL 184 (235)
Q Consensus 106 ~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvSn~~~~~l~~~~~~~~~~~~q~ 184 (235)
++.+...+-+ ..|..+|+++|++-..-.+.........++.++++.+.+ .++...++....+.++.+.+. .++.+++
T Consensus 16 ~s~e~~~~i~-~~L~~~GV~~IEvg~~~~~~~~p~~~~~~~~i~~l~~~~~~~~~~~l~~~~~~~i~~a~~~-g~~~i~i 93 (265)
T cd03174 16 FSTEDKLEIA-EALDEAGVDSIEVGSGASPKAVPQMEDDWEVLRAIRKLVPNVKLQALVRNREKGIERALEA-GVDEVRI 93 (265)
T ss_pred CCHHHHHHHH-HHHHHcCCCEEEeccCcCccccccCCCHHHHHHHHHhccCCcEEEEEccCchhhHHHHHhC-CcCEEEE
Confidence 4555555544 457788998888866654422222346788889999888 677767776656777777665 3566666
Q ss_pred ccCccc--------ccc------cchHHHHHHHhCCeEEecc
Q 026625 185 EWSLWA--------RDI------ENEIVPLCRELGIGIVPYC 212 (235)
Q Consensus 185 ~~n~~~--------~~~------~~~l~~~~~~~gi~v~a~s 212 (235)
.+..-+ +.. -...+++++++|+.+...-
T Consensus 94 ~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~ 135 (265)
T cd03174 94 FDSASETHSRKNLNKSREEDLENAEEAIEAAKEAGLEVEGSL 135 (265)
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 665441 111 1467888999998776554
|
The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM". |
| >PRK08609 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.28 E-value=14 Score=34.61 Aligned_cols=150 Identities=15% Similarity=0.177 Sum_probs=83.6
Q ss_pred HHHHHHHHHHcCCCeEeCCCCCC-----CCcHHHHHHHHHhc-------CCCCCEEEEeccccccCCCcccccCCCHHHH
Q 026625 44 GISIIKHAFSKGITFFDTADKYG-----PYTNEILLGKALKE-------LPRENIQVATKFGFVELGFTSVIVKGTPEYV 111 (235)
Q Consensus 44 ~~~~l~~A~~~Gi~~~DtA~~Yg-----~g~sE~~lG~al~~-------~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i 111 (235)
..++++.|.+.|+.+|=.++++. .|.+...+-..++. ...=++++..-+.... +..
T Consensus 351 leemv~~A~~~Gl~~i~iTdH~~~~~~~~~~~~~~l~~~~~ei~~l~~~~~~i~Il~GiEv~i~~------------~g~ 418 (570)
T PRK08609 351 IEEMVEACIAKGYEYMAITDHSQYLKVANGLTEERLLEQAEEIKALNEKYPEIDILSGIEMDILP------------DGS 418 (570)
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCCccccCCCCHHHHHHHHHHHHHHHHhcCCCeEEEEEEEeecC------------Ccc
Confidence 45699999999999998887752 12233333322221 1111233333222211 111
Q ss_pred HHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCC------CC--H---HHHHHHHhcCCee
Q 026625 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------AS--P---DTIRRAHAVHPIT 180 (235)
Q Consensus 112 ~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn------~~--~---~~l~~~~~~~~~~ 180 (235)
..-.+..|+. .||+ +.-+|++.. .+.+++++.+.++.+.|.+--||=-. +. . +.+.+++.... .
T Consensus 419 ~d~~~~~L~~--~D~v-I~SvH~~~~-~~~~~~~~~l~~a~~~~~~dILaHpd~rli~~~~~~~~d~~~i~~~a~~~G-~ 493 (570)
T PRK08609 419 LDYDDEVLAE--LDYV-IAAIHSSFS-QSEEEIMKRLENACRNPYVRLIAHPTGRLIGRRDGYDVNIDQLIELAKETN-T 493 (570)
T ss_pred hhhcHHHHHh--hCEE-EEEeecCCC-CCHHHHHHHHHHHhcCCCceEEECCCccccccCCCchHHHHHHHHHHHHhC-C
Confidence 2222234443 4555 666786533 34567889999999888887776443 11 1 23333322233 3
Q ss_pred EEeeccCcccccccchHHHHHHHhCCeEEe
Q 026625 181 AVQLEWSLWARDIENEIVPLCRELGIGIVP 210 (235)
Q Consensus 181 ~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a 210 (235)
++|++-+.+.......++..|.+.|+.+..
T Consensus 494 ~lEINa~~~r~~~~~~~~~~~~e~Gv~i~i 523 (570)
T PRK08609 494 ALELNANPNRLDLSAEHLKKAQEAGVKLAI 523 (570)
T ss_pred EEEEcCCccccCccHHHHHHHHHcCCEEEE
Confidence 677777666544457899999999997653
|
|
| >COG0135 TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.99 E-value=3.6 Score=33.29 Aligned_cols=82 Identities=17% Similarity=0.240 Sum_probs=54.5
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCC-ccEEEeC-CCCHHHHHHHHhcCCeeEEeeccCcccccccch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLS-EASPDTIRRAHAVHPITAVQLEWSLWARDIENE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~iGvS-n~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~ 196 (235)
...+|.||+=+++.-.-......++ ..++.+.-. ++.+||. |.+.+.+.++++..+++.+|++-. ...+
T Consensus 18 a~~~gad~iG~If~~~SpR~Vs~~~----a~~i~~~v~~~~~VgVf~n~~~~~i~~i~~~~~ld~VQlHG~-----e~~~ 88 (208)
T COG0135 18 AAKAGADYIGFIFVPKSPRYVSPEQ----AREIASAVPKVKVVGVFVNESIEEILEIAEELGLDAVQLHGD-----EDPE 88 (208)
T ss_pred HHHcCCCEEEEEEcCCCCCcCCHHH----HHHHHHhCCCCCEEEEECCCCHHHHHHHHHhcCCCEEEECCC-----CCHH
Confidence 3478999988876653223343333 333333333 8899996 677889999999999999998643 2356
Q ss_pred HHHHHHHhC-CeEE
Q 026625 197 IVPLCRELG-IGIV 209 (235)
Q Consensus 197 l~~~~~~~g-i~v~ 209 (235)
.++..++.. +.|+
T Consensus 89 ~~~~l~~~~~~~v~ 102 (208)
T COG0135 89 YIDQLKEELGVPVI 102 (208)
T ss_pred HHHHHHhhcCCceE
Confidence 777777664 5554
|
|
| >COG1140 NarY Nitrate reductase beta subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=88.51 E-value=0.21 Score=43.50 Aligned_cols=54 Identities=17% Similarity=0.327 Sum_probs=40.9
Q ss_pred cCCccEEEeCCCCHHHHHHHHhcC-CeeEEeeccCcccccccchHHHHHHHhCCe
Q 026625 154 EGKIKYIGLSEASPDTIRRAHAVH-PITAVQLEWSLWARDIENEIVPLCRELGIG 207 (235)
Q Consensus 154 ~G~ir~iGvSn~~~~~l~~~~~~~-~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~ 207 (235)
-|+||++||--++.+++.++.+.. .-+..+.+..++-...+..+++.|++.||+
T Consensus 263 VGriRYlGVlLYDaDrv~eaAs~~~e~dly~~Q~~ifLDP~DP~Vi~~A~k~Gip 317 (513)
T COG1140 263 VGRIRYLGVLLYDADRVEEAASTENEKDLYERQLDVFLDPHDPAVIEQARKDGIP 317 (513)
T ss_pred hcceeeeeeeeecHHHHHHhhcCccHHHHHHHHHhhhcCCCCHHHHHHHHHcCCc
Confidence 489999999999999999988662 234445555555555567889999998875
|
|
| >cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins | Back alignment and domain information |
|---|
Probab=87.15 E-value=14 Score=29.54 Aligned_cols=145 Identities=16% Similarity=0.125 Sum_probs=84.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc----CCCCCEEEEeccccccCCCcccccCCCHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~----~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~ 115 (235)
|++++.+.+..+++.|+...|.- +..+-.++++ +.++++++.-=. ...+.+++.+
T Consensus 9 D~~~~~~~v~~~l~~g~~~~~i~--------~~~l~p~m~~vG~~w~~~~i~va~e~-------------~as~~~~~~l 67 (201)
T cd02070 9 DEEETVELVKKALEAGIDPQDII--------EEGLAPGMDIVGDKYEEGEIFVPELL-------------MAADAMKAGL 67 (201)
T ss_pred CHHHHHHHHHHHHHcCCCHHHHH--------HHHHHHHHHHHHHHHccCCeeHHHHH-------------HHHHHHHHHH
Confidence 78899999999999997655432 2344444443 445555554321 1233444444
Q ss_pred HHHHHHcCCCc---ccEEEeccCCCCCCHHHHHHHHHHHHHcCC-ccEEEeCCCCHHHHHHHHhcCCeeEEeeccCcccc
Q 026625 116 EASLRRLDVEY---IDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR 191 (235)
Q Consensus 116 ~~sL~~Lg~~~---iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~ 191 (235)
......+.... ---+++-.+..+.+--...=.-.-|+..|. |.++| .+-+.+.+.+.+....++++-+.++....
T Consensus 68 ~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG-~~~p~~~l~~~~~~~~~d~v~lS~~~~~~ 146 (201)
T cd02070 68 DLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLG-RDVPPEEFVEAVKEHKPDILGLSALMTTT 146 (201)
T ss_pred HHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECC-CCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence 44444443221 123445544433332222223334667786 56778 66778888888888888888887765554
Q ss_pred ccc-chHHHHHHHhCC
Q 026625 192 DIE-NEIVPLCRELGI 206 (235)
Q Consensus 192 ~~~-~~l~~~~~~~gi 206 (235)
-.. ..+++.+++.+.
T Consensus 147 ~~~~~~~i~~lr~~~~ 162 (201)
T cd02070 147 MGGMKEVIEALKEAGL 162 (201)
T ss_pred HHHHHHHHHHHHHCCC
Confidence 322 678888888854
|
A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases. |
| >PRK01222 N-(5'-phosphoribosyl)anthranilate isomerase; Provisional | Back alignment and domain information |
|---|
Probab=86.70 E-value=2.5 Score=34.15 Aligned_cols=66 Identities=20% Similarity=0.224 Sum_probs=44.7
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeC-CCCHHHHHHHHhcCCeeEEeecc
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLEW 186 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS-n~~~~~l~~~~~~~~~~~~q~~~ 186 (235)
+..+|.|++=+++...-......+.+-+....+ .+.+..+||. |-+++.+.++++...++++|++-
T Consensus 19 ~~~~Gad~iGfI~~~~S~R~V~~~~a~~i~~~~--~~~i~~VgVf~~~~~~~i~~~~~~~~~d~vQLHg 85 (210)
T PRK01222 19 AAELGADAIGFVFYPKSPRYVSPEQAAELAAAL--PPFVKVVGVFVNASDEEIDEIVETVPLDLLQLHG 85 (210)
T ss_pred HHHcCCCEEEEccCCCCCCcCCHHHHHHHHHhC--CCCCCEEEEEeCCCHHHHHHHHHhcCCCEEEECC
Confidence 346899999887433222223333333333322 3568999996 67889999999989999999964
|
|
| >cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion | Back alignment and domain information |
|---|
Probab=85.42 E-value=6.6 Score=31.91 Aligned_cols=87 Identities=14% Similarity=0.095 Sum_probs=61.2
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chHHHHHHHh
Q 026625 127 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEIVPLCREL 204 (235)
Q Consensus 127 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l~~~~~~~ 204 (235)
.++.++..|-+. +.++.+.+|.+...+. ..+=|.++.+.+.+++....++++|+..+..-.-.+ ..+.++|+++
T Consensus 120 ~~i~~iEeP~~~----~d~~~~~~L~~~~~~pIa~dEs~~~~~~~~~~~~~~~~d~~~~k~~~~GGi~~~~~i~~~a~~~ 195 (229)
T cd00308 120 YGLAWIEEPCAP----DDLEGYAALRRRTGIPIAADESVTTVDDALEALELGAVDILQIKPTRVGGLTESRRAADLAEAF 195 (229)
T ss_pred cCCCeEECCCCc----cCHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHc
Confidence 466667766433 2456677788777665 334456778888888887788999987765533112 6789999999
Q ss_pred CCeEEecccCccc
Q 026625 205 GIGIVPYCPLGRG 217 (235)
Q Consensus 205 gi~v~a~spl~~G 217 (235)
|+.++..+.+..|
T Consensus 196 gi~~~~~~~~~s~ 208 (229)
T cd00308 196 GIRVMVHGTLESS 208 (229)
T ss_pred CCEEeecCCCCCH
Confidence 9999998876544
|
Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase. |
| >PRK10550 tRNA-dihydrouridine synthase C; Provisional | Back alignment and domain information |
|---|
Probab=84.79 E-value=25 Score=30.31 Aligned_cols=133 Identities=12% Similarity=-0.027 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCC---C-----CCCCC----cHHHHHHHHHhcC---CCCCEEEEeccccccCCCccccc
Q 026625 40 SEEDGISIIKHAFSKGITFFDTA---D-----KYGPY----TNEILLGKALKEL---PRENIQVATKFGFVELGFTSVIV 104 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA---~-----~Yg~g----~sE~~lG~al~~~---~R~~~~I~tK~~~~~~~~~~~~~ 104 (235)
++++..++...+.+.|+..||-- + .||.| ..-+.+.+.++.+ -.+++-|+-|+.....
T Consensus 73 ~p~~~~~aA~~~~~~g~d~IdiN~GCP~~~v~~~g~Gs~Ll~~~~~~~eiv~avr~~~~~~~pVsvKiR~g~~------- 145 (312)
T PRK10550 73 YPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVTVKVRLGWD------- 145 (312)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCchHHhcCCCchHhhcCHHHHHHHHHHHHHhcCCCcceEEEEECCCC-------
Confidence 66777778888889999999832 1 35544 2334455555542 1225778888764321
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHH---HHHHHHHHHHHcCCccEEEeCC-CCHHHHHHHHhcCCee
Q 026625 105 KGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIE---ETIGEMKKLVEEGKIKYIGLSE-ASPDTIRRAHAVHPIT 180 (235)
Q Consensus 105 ~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~---~~~~~l~~l~~~G~ir~iGvSn-~~~~~l~~~~~~~~~~ 180 (235)
+.+.. ..+-+.++..| +|.+-+|.-....... .-|+...++++.=.|.-||... .++++.+++++....+
T Consensus 146 --~~~~~-~~~a~~l~~~G---vd~i~Vh~Rt~~~~y~g~~~~~~~i~~ik~~~~iPVi~nGdI~t~~da~~~l~~~g~D 219 (312)
T PRK10550 146 --SGERK-FEIADAVQQAG---ATELVVHGRTKEDGYRAEHINWQAIGEIRQRLTIPVIANGEIWDWQSAQQCMAITGCD 219 (312)
T ss_pred --CchHH-HHHHHHHHhcC---CCEEEECCCCCccCCCCCcccHHHHHHHHhhcCCcEEEeCCcCCHHHHHHHHhccCCC
Confidence 11222 24445567777 5777888654322111 1378888888887788888877 4788888888776666
Q ss_pred EEeec
Q 026625 181 AVQLE 185 (235)
Q Consensus 181 ~~q~~ 185 (235)
.+++-
T Consensus 220 gVmiG 224 (312)
T PRK10550 220 AVMIG 224 (312)
T ss_pred EEEEc
Confidence 66653
|
|
| >PF00682 HMGL-like: HMGL-like of this family is not conserved in other members | Back alignment and domain information |
|---|
Probab=84.25 E-value=13 Score=30.22 Aligned_cols=120 Identities=15% Similarity=0.224 Sum_probs=64.5
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCC-CCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHH
Q 026625 39 LSEEDGISIIKHAFSKGITFFDTA-DKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (235)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA-~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 117 (235)
++.++..++++...++||..|++. +..+. ...+.+.+..+..+...+...+. .....++..++.
T Consensus 11 ~~~~~k~~i~~~L~~~Gv~~iEvg~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~--------------~~~~~i~~~~~~ 75 (237)
T PF00682_consen 11 FSTEEKLEIAKALDEAGVDYIEVGFPFASE-DDFEQVRRLREALPNARLQALCR--------------ANEEDIERAVEA 75 (237)
T ss_dssp --HHHHHHHHHHHHHHTTSEEEEEHCTSSH-HHHHHHHHHHHHHHSSEEEEEEE--------------SCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCEEEEcccccCH-HHHHHhhhhhhhhcccccceeee--------------ehHHHHHHHHHh
Confidence 577888999999999999999999 44431 22333444433333322222222 224555555543
Q ss_pred HHHHcCCCcccEEEeccCCC-----CCC----HHHHHHHHHHHHHcCCccEEEeCC---CCHHHHHHHH
Q 026625 118 SLRRLDVEYIDLYYQHRVDT-----SVP----IEETIGEMKKLVEEGKIKYIGLSE---ASPDTIRRAH 174 (235)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~-----~~~----~~~~~~~l~~l~~~G~ir~iGvSn---~~~~~l~~~~ 174 (235)
. ...|.+.+.++.--++.. ... ++.+.+..+..++.|....+++.. ++++.+.++.
T Consensus 76 ~-~~~g~~~i~i~~~~s~~~~~~~~~~~~~~~~~~~~~~v~~ak~~g~~v~~~~~~~~~~~~~~~~~~~ 143 (237)
T PF00682_consen 76 A-KEAGIDIIRIFISVSDLHIRKNLNKSREEALERIEEAVKYAKELGYEVAFGCEDASRTDPEELLELA 143 (237)
T ss_dssp H-HHTTSSEEEEEEETSHHHHHHHTCSHHHHHHHHHHHHHHHHHHTTSEEEEEETTTGGSSHHHHHHHH
T ss_pred h-HhccCCEEEecCcccHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCceEeCccccccccHHHHHHHH
Confidence 3 456777666554322200 011 334555566666777777777744 3445444443
|
are a sub-families of this Pfam.; InterPro: IPR000891 Pyruvate carboxylase (6.4.1.1 from EC) (PC), a member of the biotin-dependent enzyme family, is involved in the gluconeogenesis by mediating the carboxylation of pyruvate to oxaloacetate. Biotin-dependent carboxylase enzymes perform a two step reaction. Enzyme-bound biotin is first carboxylated by bicarbonate and ATP and the carboxyl group temporarily bound to biotin is subsequently transferred to an acceptor substrate such as pyruvate []. PC has three functional domains: a biotin carboxylase (BC) domain, a carboxyltransferase (CT) domain which perform the second part of the reaction and a biotinyl domain [, ]. The mechanism by which the carboxyl group is transferred from the carboxybiotin to the pyruvate is not well understood. The pyruvate carboxyltransferase domain is also found in other pyruvate binding enzymes and acetyl-CoA dependent enzymes suggesting that this domain can be associated with different enzymatic activities. This domain is found towards the N-terminal region of various aldolase enzymes. This N-terminal TIM barrel domain [] interacts with the C-terminal domain. The C-terminal DmpG_comm domain (IPR012425 from INTERPRO) is thought to promote heterodimerisation with members of IPR003361 from INTERPRO to form a bifunctional aldolase-dehydrogenase []. ; GO: 0003824 catalytic activity; PDB: 3MP5_E 3MP3_E 2CW6_E 3MP4_D 3HBL_A 3HB9_C 3HO8_A 3BG5_C 1YDN_B 3RMJ_A .... |
| >PRK08392 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=84.04 E-value=21 Score=28.79 Aligned_cols=149 Identities=17% Similarity=0.165 Sum_probs=73.5
Q ss_pred HHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc---C-CCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 44 GISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE---L-PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 44 ~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~---~-~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
..++++.|.+.|++.+=.+++.-.. ....+-..+++ . .+.++.|. .|... +..+.. .+..+..+
T Consensus 16 ~~e~v~~A~~~Gl~~i~iTdH~~~~-~~~~~~~y~~~i~~l~~~~~i~il--~GiE~--------~~~~~~-~~~~~~~~ 83 (215)
T PRK08392 16 VRDNIAEAERKGLRLVGISDHIHYF-TPSKFNAYINEIRQWGEESEIVVL--AGIEA--------NITPNG-VDITDDFA 83 (215)
T ss_pred HHHHHHHHHHcCCCEEEEccCCCcc-chhhHHHHHHHHHHHhhccCceEE--EeEEe--------eecCCc-chhHHHHH
Confidence 5788999999999998666654210 11112222222 1 12233222 22111 011111 12233334
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCC-------C-HHHHHHHHh---cCCeeEEeeccCc
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA-------S-PDTIRRAHA---VHPITAVQLEWSL 188 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~-------~-~~~l~~~~~---~~~~~~~q~~~n~ 188 (235)
+. .||+ +..+|...........++.+.++.+.+.+.-+|=-.. . .+.++++++ .... ++.+ |-
T Consensus 84 ~~--~D~v-I~SvH~~~~~~~~~~Y~~~~~~~~~~~~~dvlgH~d~~~~~~~~~~~~~~~~i~~~~~~~g~-~lEi--Nt 157 (215)
T PRK08392 84 KK--LDYV-IASVHEWFGRPEHHEYIELVKLALMDENVDIIGHFGNSFPYIGYPSEEELKEILDLAEAYGK-AFEI--SS 157 (215)
T ss_pred hh--CCEE-EEEeecCcCCcHHHHHHHHHHHHHhcCCCCEEeCCCccccCCCCchHHHHHHHHHHHHHhCC-EEEE--eC
Confidence 43 3444 5566844333335677888888888887776664221 1 123333332 2221 2222 21
Q ss_pred ccccccchHHHHHHHhCCeEEe
Q 026625 189 WARDIENEIVPLCRELGIGIVP 210 (235)
Q Consensus 189 ~~~~~~~~l~~~~~~~gi~v~a 210 (235)
..+.+...+++.|++.|+.++.
T Consensus 158 ~~~~p~~~~l~~~~~~G~~~~i 179 (215)
T PRK08392 158 RYRVPDLEFIRECIKRGIKLTF 179 (215)
T ss_pred CCCCCCHHHHHHHHHcCCEEEE
Confidence 1222346799999999987763
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.46 E-value=8.2 Score=34.31 Aligned_cols=82 Identities=17% Similarity=0.203 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHH
Q 026625 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120 (235)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 120 (235)
.-....++++|++.|++++|||...- ....+.+.. .+..+.+..-.|..+ ..+--.....+++-..
T Consensus 78 ~~~~~~i~ka~i~~gv~yvDts~~~~---~~~~~~~~a---~~Agit~v~~~G~dP--------Gi~nv~a~~a~~~~~~ 143 (389)
T COG1748 78 PFVDLTILKACIKTGVDYVDTSYYEE---PPWKLDEEA---KKAGITAVLGCGFDP--------GITNVLAAYAAKELFD 143 (389)
T ss_pred chhhHHHHHHHHHhCCCEEEcccCCc---hhhhhhHHH---HHcCeEEEcccCcCc--------chHHHHHHHHHHHhhc
Confidence 34456899999999999999998664 322222222 344555555555432 1222222222222222
Q ss_pred HcCCCcccEEEeccCCCC
Q 026625 121 RLDVEYIDLYYQHRVDTS 138 (235)
Q Consensus 121 ~Lg~~~iDl~~lh~~~~~ 138 (235)
.+++||+|..+.|+..
T Consensus 144 --~i~si~iy~g~~g~~~ 159 (389)
T COG1748 144 --EIESIDIYVGGLGEHG 159 (389)
T ss_pred --cccEEEEEEecCCCCC
Confidence 5889999999998765
|
|
| >PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac) | Back alignment and domain information |
|---|
Probab=83.34 E-value=10 Score=31.35 Aligned_cols=110 Identities=23% Similarity=0.205 Sum_probs=61.1
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHH-----------------Hhc--CCCCCEEEEeccccccCCC
Q 026625 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKA-----------------LKE--LPRENIQVATKFGFVELGF 99 (235)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~a-----------------l~~--~~R~~~~I~tK~~~~~~~~ 99 (235)
.+.++..++.+.|-+.|+.+|=|...-. +-..+-+. |+. -....++|||=..
T Consensus 53 l~~e~~~~L~~~~~~~gi~f~stpfd~~---s~d~l~~~~~~~~KIaS~dl~n~~lL~~~A~tgkPvIlSTG~s------ 123 (241)
T PF03102_consen 53 LSEEQHKELFEYCKELGIDFFSTPFDEE---SVDFLEELGVPAYKIASGDLTNLPLLEYIAKTGKPVILSTGMS------ 123 (241)
T ss_dssp S-HHHHHHHHHHHHHTT-EEEEEE-SHH---HHHHHHHHT-SEEEE-GGGTT-HHHHHHHHTT-S-EEEE-TT-------
T ss_pred CCHHHHHHHHHHHHHcCCEEEECCCCHH---HHHHHHHcCCCEEEeccccccCHHHHHHHHHhCCcEEEECCCC------
Confidence 5789999999999999999998875332 22222111 010 1344566666432
Q ss_pred cccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCC-CHH-HHHHHHHHHHHcCCccEEEeCCCCHH
Q 026625 100 TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSV-PIE-ETIGEMKKLVEEGKIKYIGLSEASPD 168 (235)
Q Consensus 100 ~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~-~~~-~~~~~l~~l~~~G~ir~iGvSn~~~~ 168 (235)
+.+.|+++++...++-+ -++.++|+...+. +.+ --+..+..|++.=- --||.|.|+..
T Consensus 124 -------tl~EI~~Av~~~~~~~~---~~l~llHC~s~YP~~~e~~NL~~i~~L~~~f~-~~vG~SDHt~g 183 (241)
T PF03102_consen 124 -------TLEEIERAVEVLREAGN---EDLVLLHCVSSYPTPPEDVNLRVIPTLKERFG-VPVGYSDHTDG 183 (241)
T ss_dssp --------HHHHHHHHHHHHHHCT-----EEEEEE-SSSS--GGG--TTHHHHHHHHST-SEEEEEE-SSS
T ss_pred -------CHHHHHHHHHHHHhcCC---CCEEEEecCCCCCCChHHcChHHHHHHHHhcC-CCEEeCCCCCC
Confidence 45667777765534433 6899999997653 232 35777777775522 56799999864
|
It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A. |
| >TIGR01928 menC_lowGC/arch o-succinylbenzoic acid (OSB) synthetase | Back alignment and domain information |
|---|
Probab=83.31 E-value=29 Score=29.92 Aligned_cols=152 Identities=16% Similarity=0.117 Sum_probs=92.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+.+..+.+.|++.|=.-- +. ..+...=+++++ .+ ++.|.-=... ..+.+... .+ +.
T Consensus 132 ~~~~~~~~a~~~~~~Gf~~~KiKv--~~-~~d~~~v~~vr~~~~--~~~l~vDaN~----------~~~~~~a~-~~-~~ 194 (324)
T TIGR01928 132 NDEQMLKQIESLKATGYKRIKLKI--TP-QIMHQLVKLRRLRFP--QIPLVIDANE----------SYDLQDFP-RL-KE 194 (324)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEe--CC-chhHHHHHHHHHhCC--CCcEEEECCC----------CCCHHHHH-HH-HH
Confidence 446667777888899999874321 11 223333345555 32 3322222111 12344321 12 33
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
|+. .++.++..|-. .+.++.+.++++.-.+. ..|=|.++..++..++....++++|+..+-.-.-.+ ..
T Consensus 195 l~~-----~~~~~iEeP~~----~~~~~~~~~l~~~~~~pia~dEs~~~~~~~~~~~~~~~~dvi~~d~~~~GGit~~~~ 265 (324)
T TIGR01928 195 LDR-----YQLLYIEEPFK----IDDLSMLDELAKGTITPICLDESITSLDDARNLIELGNVKVINIKPGRLGGLTEVQK 265 (324)
T ss_pred Hhh-----CCCcEEECCCC----hhHHHHHHHHHhhcCCCEeeCCCcCCHHHHHHHHHcCCCCEEEeCcchhcCHHHHHH
Confidence 333 35566665532 24567788888875554 556678899999999988888999988765432212 67
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 026625 197 IVPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl~~G 217 (235)
+...|+++|+.++..+.+..|
T Consensus 266 ~~~~A~~~gi~~~~~~~~es~ 286 (324)
T TIGR01928 266 AIETCREHGAKVWIGGMLETG 286 (324)
T ss_pred HHHHHHHcCCeEEEcceEccc
Confidence 899999999999876655544
|
This model describes the enzyme o-succinylbenzoic acid synthetase (menC) that is involved in one of the steps of the menaquinone biosynthesis pathway. It takes SHCHC and makes it into 2-succinylbenzoate. Included in this model are low GC gram positive bacteria and archaea. Also included in the seed and in the model are enzymes with the com-name of N-acylamino acid racemase (or the more general term, racemase / racemase family), which refers to the enzyme's industrial application as racemases, and not to its biological function as o-succinylbenzoic acid synthetase. |
| >cd03323 D-glucarate_dehydratase D-Glucarate dehydratase (GlucD) catalyzes the dehydration of both D-glucarate and L-idarate to form 5-keto-4-deoxy-D-glucarate (5-KDG) , the initial reaction of the catabolic pathway for (D)-glucarate | Back alignment and domain information |
|---|
Probab=83.29 E-value=33 Score=30.56 Aligned_cols=150 Identities=15% Similarity=0.126 Sum_probs=89.9
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (235)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 117 (235)
+.++..+.++.+.+ .|++.|=.-..-.+...+...=+++++ .+ ++.|..-... ..+++... +
T Consensus 168 ~~e~~~~~a~~~~~~~Gf~~~KiKvG~~~~~~di~~v~avRea~~--~~~l~vDaN~----------~w~~~~A~----~ 231 (395)
T cd03323 168 TPEGVVRLARAAIDRYGFKSFKLKGGVLPGEEEIEAVKALAEAFP--GARLRLDPNG----------AWSLETAI----R 231 (395)
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEecCCCCHHHHHHHHHHHHHhCC--CCcEEEeCCC----------CcCHHHHH----H
Confidence 55666677777775 699987543211110122222234444 42 3333332221 12333322 3
Q ss_pred HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cc
Q 026625 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-EN 195 (235)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~ 195 (235)
.+++|. . ++.++..|-+ -++.+.+|++...+. ..|=|.++..++.++++...++++|+.....-.-. -.
T Consensus 232 ~~~~l~--~-~l~~iEeP~~------d~~~~~~L~~~~~~PIa~dEs~~~~~~~~~~i~~~avdil~~d~~~~GGit~~~ 302 (395)
T cd03323 232 LAKELE--G-VLAYLEDPCG------GREGMAEFRRATGLPLATNMIVTDFRQLGHAIQLNAVDIPLADHHFWGGMRGSV 302 (395)
T ss_pred HHHhcC--c-CCCEEECCCC------CHHHHHHHHHhcCCCEEcCCcccCHHHHHHHHHcCCCcEEeeccccccCHHHHH
Confidence 334453 2 6666665532 477888888876655 55667788899999998888999998876543211 26
Q ss_pred hHHHHHHHhCCeEEecccC
Q 026625 196 EIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 196 ~l~~~~~~~gi~v~a~spl 214 (235)
++.+.|+++|+.+...+..
T Consensus 303 kia~~A~~~gi~~~~h~~~ 321 (395)
T cd03323 303 RVAQVCETWGLGWGMHSNN 321 (395)
T ss_pred HHHHHHHHcCCeEEEecCc
Confidence 8999999999999987754
|
GlucD belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion. |
| >cd03318 MLE Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway | Back alignment and domain information |
|---|
Probab=82.56 E-value=33 Score=30.02 Aligned_cols=148 Identities=10% Similarity=0.066 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHcC-CCeEeCCCCCCC-C-cH-HHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHH
Q 026625 42 EDGISIIKHAFSKG-ITFFDTADKYGP-Y-TN-EILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (235)
Q Consensus 42 ~~~~~~l~~A~~~G-i~~~DtA~~Yg~-g-~s-E~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 117 (235)
++..+.+..+++.| ++.|=.-- |. . .. .+.+ +++++.-.+++.|.-=... ..+.+...+ +-+
T Consensus 144 ~~~~~~~~~~~~~G~f~~~KiKv--g~~~~~~d~~~v-~avr~~~g~~~~l~iDaN~----------~~~~~~A~~-~~~ 209 (365)
T cd03318 144 ERDIAEAEEMLEAGRHRRFKLKM--GARPPADDLAHV-EAIAKALGDRASVRVDVNQ----------AWDESTAIR-ALP 209 (365)
T ss_pred HHHHHHHHHHHhCCCceEEEEEe--CCCChHHHHHHH-HHHHHHcCCCcEEEEECCC----------CCCHHHHHH-HHH
Confidence 44455667778889 88875421 11 1 11 2333 4555422233333322111 123333222 223
Q ss_pred HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cc
Q 026625 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-EN 195 (235)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~ 195 (235)
.|+.+ ++.++..|-+. +.++.+.+|+++..+. ..|=|-++..++..+++...++++|+.....-.-. -.
T Consensus 210 ~l~~~-----~~~~iEeP~~~----~~~~~~~~l~~~~~~pia~dE~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~ 280 (365)
T cd03318 210 RLEAA-----GVELIEQPVPR----ENLDGLARLRSRNRVPIMADESVSGPADAFELARRGAADVFSLKIAKSGGLRRAQ 280 (365)
T ss_pred HHHhc-----CcceeeCCCCc----ccHHHHHHHHhhcCCCEEcCcccCCHHHHHHHHHhCCCCeEEEeecccCCHHHHH
Confidence 34444 44556555332 3467888888876655 55666788899999998877888998765543211 26
Q ss_pred hHHHHHHHhCCeEEecc
Q 026625 196 EIVPLCRELGIGIVPYC 212 (235)
Q Consensus 196 ~l~~~~~~~gi~v~a~s 212 (235)
.+...|+++|+.++..+
T Consensus 281 ~~~~~a~~~gi~~~~~~ 297 (365)
T cd03318 281 KVAAIAEAAGIALYGGT 297 (365)
T ss_pred HHHHHHHHcCCceeecC
Confidence 78999999999988643
|
This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion. |
| >PLN02363 phosphoribosylanthranilate isomerase | Back alignment and domain information |
|---|
Probab=82.53 E-value=5.8 Score=33.17 Aligned_cols=66 Identities=21% Similarity=0.329 Sum_probs=44.5
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeC-CCCHHHHHHHHhcCCeeEEeecc
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLEW 186 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS-n~~~~~l~~~~~~~~~~~~q~~~ 186 (235)
.++|.|++=+++...-......+.+ +.+.+......++.+||. |-+++.+.++.+..+++++|++-
T Consensus 64 ~~~GaD~iGfIf~~~SpR~Vs~e~a-~~I~~~l~~~~~~~VgVfv~~~~~~I~~~~~~~~ld~VQLHG 130 (256)
T PLN02363 64 VEAGADFIGMILWPKSKRSISLSVA-KEISQVAREGGAKPVGVFVDDDANTILRAADSSDLELVQLHG 130 (256)
T ss_pred HHcCCCEEEEecCCCCCCcCCHHHH-HHHHHhccccCccEEEEEeCCCHHHHHHHHHhcCCCEEEECC
Confidence 3689999999754432233444333 333333333246789995 88899999999989999999964
|
|
| >TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit | Back alignment and domain information |
|---|
Probab=82.33 E-value=23 Score=32.71 Aligned_cols=134 Identities=12% Similarity=0.158 Sum_probs=74.5
Q ss_pred CCCCcHHHHHHHHHhc----CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCC
Q 026625 65 YGPYTNEILLGKALKE----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVP 140 (235)
Q Consensus 65 Yg~g~sE~~lG~al~~----~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~ 140 (235)
+| +++.+-++|++ .+.+-++|.+-.. ++-|-..++...+.++.+.++++.++.|.....
T Consensus 67 ~G---~~~~L~~aI~~~~~~~~P~~I~V~sTC~--------------selIGdDi~~~~~~~~~~~~pvi~v~t~gf~g~ 129 (511)
T TIGR01278 67 RG---SQTRLVDTVRRVDDRFKPDLIVVTPSCT--------------SSLLQEDLGNLAAAAGLDKSKVIVADVNAYRRK 129 (511)
T ss_pred cc---hHHHHHHHHHHHHHhcCCCEEEEeCCCh--------------HHHhccCHHHHHHHhccCCCcEEEecCCCcccc
Confidence 66 67777888877 2333455555432 333444455555555554688999999876543
Q ss_pred H-HHHHHHHHHHH--------------HcCCccEEEeCCC------CHHHHHHHHhcCCeeEEee-cc------------
Q 026625 141 I-EETIGEMKKLV--------------EEGKIKYIGLSEA------SPDTIRRAHAVHPITAVQL-EW------------ 186 (235)
Q Consensus 141 ~-~~~~~~l~~l~--------------~~G~ir~iGvSn~------~~~~l~~~~~~~~~~~~q~-~~------------ 186 (235)
. ...-.++++++ +.+.|.-||.++. +..++.++++...+.++.+ +.
T Consensus 130 ~~~g~~~al~~lv~~~~~~~~~~~~~~~~~~VNIiG~~~l~~~~~~D~~elkrlL~~lGi~vn~v~p~g~s~~dl~~l~~ 209 (511)
T TIGR01278 130 ENQAADRTLTQLVRRFAKEQPKPGRTTEKPSVNLLGPASLGFHHRHDLIELRRLLKTLGIEVNVVAPWGASIADLARLPA 209 (511)
T ss_pred hhHHHHHHHHHHHHHHHhccccccccCCCCcEEEEeCCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhccc
Confidence 2 22223333332 2356888998863 3456777777766666543 32
Q ss_pred ---Ccccc-cccchHHHHHH-HhCCeEEecccCc
Q 026625 187 ---SLWAR-DIENEIVPLCR-ELGIGIVPYCPLG 215 (235)
Q Consensus 187 ---n~~~~-~~~~~l~~~~~-~~gi~v~a~spl~ 215 (235)
|+... .....+-++.+ +.|++++...|++
T Consensus 210 A~~NIv~~~~~g~~~A~~Le~~fGiP~i~~~PiG 243 (511)
T TIGR01278 210 AWLNICPYREIGLMAAEYLKEKFGQPYITTTPIG 243 (511)
T ss_pred CcEEEEechHHHHHHHHHHHHHhCCCcccccccC
Confidence 22211 11123444443 4499998777775
|
This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis. |
| >cd03322 rpsA The starvation sensing protein RpsA from E | Back alignment and domain information |
|---|
Probab=81.53 E-value=36 Score=29.81 Aligned_cols=145 Identities=10% Similarity=0.033 Sum_probs=89.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+.+..+.+.|++.|=.=- .+.+ +++++.-.+++.|.--... ..+.+... +-+
T Consensus 126 ~~~~~~~~a~~~~~~Gf~~~KiKv-------~~~v-~avre~~G~~~~l~vDaN~----------~w~~~~A~----~~~ 183 (361)
T cd03322 126 DIPELLEAVERHLAQGYRAIRVQL-------PKLF-EAVREKFGFEFHLLHDVHH----------RLTPNQAA----RFG 183 (361)
T ss_pred CHHHHHHHHHHHHHcCCCeEeeCH-------HHHH-HHHHhccCCCceEEEECCC----------CCCHHHHH----HHH
Confidence 445666777778889999885311 2222 3444422234433322211 12343322 222
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+.|. .+++.++..|-+. +-++.+.+|++...+. ..|=|-++..++..++....++++|+...-.-.-.+ ..+
T Consensus 184 ~~l~--~~~l~~iEeP~~~----~d~~~~~~L~~~~~~pia~gE~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~i 257 (361)
T cd03322 184 KDVE--PYRLFWMEDPTPA----ENQEAFRLIRQHTATPLAVGEVFNSIWDWQNLIQERLIDYIRTTVSHAGGITPARKI 257 (361)
T ss_pred HHhh--hcCCCEEECCCCc----ccHHHHHHHHhcCCCCEEeccCCcCHHHHHHHHHhCCCCEEecCccccCCHHHHHHH
Confidence 3332 2466667766432 3477888888887665 667778899999999988888999998765432112 678
Q ss_pred HHHHHHhCCeEEecc
Q 026625 198 VPLCRELGIGIVPYC 212 (235)
Q Consensus 198 ~~~~~~~gi~v~a~s 212 (235)
.+.|+++|+.+...+
T Consensus 258 a~~A~~~gi~~~~h~ 272 (361)
T cd03322 258 ADLASLYGVRTGWHG 272 (361)
T ss_pred HHHHHHcCCeeeccC
Confidence 999999999998654
|
coli and its homologs are lactonizing enzymes whose putative targets are homoserine lactone (HSL)-derivative. They are part of the mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subfamily share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and catalytic residues, a partially conserved Lys-X-Lys motif and a conserved histidine-aspartate dyad. |
| >cd03325 D-galactonate_dehydratase D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactnate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway | Back alignment and domain information |
|---|
Probab=81.19 E-value=36 Score=29.64 Aligned_cols=153 Identities=12% Similarity=0.111 Sum_probs=89.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCC--------cHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPY--------TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYV 111 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g--------~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i 111 (235)
+.++..+.+..+.+.|++.|=.--....+ ..+...=+++++.-.+++.|..=... ..+.+.
T Consensus 123 ~~~~~~~~~~~~~~~Gf~~~KiKvg~~~~~~~~~~~~~~D~~~i~avr~~~g~~~~l~vDaN~----------~~~~~~- 191 (352)
T cd03325 123 RPSDVAEAARARREAGFTAVKMNATEELQWIDTSKKVDAAVERVAALREAVGPDIDIGVDFHG----------RVSKPM- 191 (352)
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCCCCcccCCCHHHHHHHHHHHHHHHHhhCCCCEEEEECCC----------CCCHHH-
Confidence 44556677777889999988653221100 12233334555422223333332211 123332
Q ss_pred HHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccc
Q 026625 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWA 190 (235)
Q Consensus 112 ~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~ 190 (235)
..+-++.|. ..++.++..|-.. +-++.+.+|++..-+. ..|=|.++..++..+++...++++|+.....-
T Consensus 192 ---A~~~~~~l~--~~~i~~iEeP~~~----~d~~~~~~L~~~~~~pia~dEs~~~~~~~~~~~~~~~~d~v~~d~~~~G 262 (352)
T cd03325 192 ---AKDLAKELE--PYRLLFIEEPVLP----ENVEALAEIAARTTIPIATGERLFSRWDFKELLEDGAVDIIQPDISHAG 262 (352)
T ss_pred ---HHHHHHhcc--ccCCcEEECCCCc----cCHHHHHHHHHhCCCCEEecccccCHHHHHHHHHhCCCCEEecCccccC
Confidence 223333442 2455666655432 3477888888876555 44556788999999988777889999865443
Q ss_pred ccc-cchHHHHHHHhCCeEEecc
Q 026625 191 RDI-ENEIVPLCRELGIGIVPYC 212 (235)
Q Consensus 191 ~~~-~~~l~~~~~~~gi~v~a~s 212 (235)
.-. -..+.+.|+++|+.++..+
T Consensus 263 Git~~~~~~~lA~~~gi~~~~h~ 285 (352)
T cd03325 263 GITELKKIAAMAEAYDVALAPHC 285 (352)
T ss_pred CHHHHHHHHHHHHHcCCcEeccC
Confidence 211 2689999999999998665
|
D-galactonate dehydratase belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. |
| >cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain | Back alignment and domain information |
|---|
Probab=80.87 E-value=33 Score=28.97 Aligned_cols=151 Identities=13% Similarity=0.114 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCC----------CCCCCCcHHHHHHHHHhcCCCC-CEEEEeccccccCCCcccccCCCH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTA----------DKYGPYTNEILLGKALKELPRE-NIQVATKFGFVELGFTSVIVKGTP 108 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA----------~~Yg~g~sE~~lG~al~~~~R~-~~~I~tK~~~~~~~~~~~~~~~~~ 108 (235)
+.++..++.+.+.+.|+..||.- ..|+ .+.+.+-+.++.+.+. ++-|.-|+.+..
T Consensus 100 ~~~~~~~~a~~~~~~G~d~iElN~~cP~~~~~g~~~~--~~~~~~~eiv~~vr~~~~~Pv~vKl~~~~------------ 165 (296)
T cd04740 100 TVEEFVEVAEKLADAGADAIELNISCPNVKGGGMAFG--TDPEAVAEIVKAVKKATDVPVIVKLTPNV------------ 165 (296)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCccccc--CCHHHHHHHHHHHHhccCCCEEEEeCCCc------------
Confidence 56788888889999999998872 1232 3556666666653322 678888886432
Q ss_pred HHHHHHHHHHHHHcCCCcccEEE------eccCC--C-----------CCCHHHHHHHHHHHHHcCCccEEEeCCC-CHH
Q 026625 109 EYVRSCCEASLRRLDVEYIDLYY------QHRVD--T-----------SVPIEETIGEMKKLVEEGKIKYIGLSEA-SPD 168 (235)
Q Consensus 109 ~~i~~~~~~sL~~Lg~~~iDl~~------lh~~~--~-----------~~~~~~~~~~l~~l~~~G~ir~iGvSn~-~~~ 168 (235)
+.+. .+-+.++..|.|.|++.- +|... + .....-.++.+.++++.=.+.-||+... +++
T Consensus 166 ~~~~-~~a~~~~~~G~d~i~~~nt~~g~~~~~~~~~~~~~~~~gg~sg~~~~~~~~~~i~~i~~~~~ipii~~GGI~~~~ 244 (296)
T cd04740 166 TDIV-EIARAAEEAGADGLTLINTLKGMAIDIETRKPILGNVTGGLSGPAIKPIALRMVYQVYKAVEIPIIGVGGIASGE 244 (296)
T ss_pred hhHH-HHHHHHHHcCCCEEEEECCCcccccccccCceeecCCcceecCcccchHHHHHHHHHHHhcCCCEEEECCCCCHH
Confidence 1222 223456778887776531 11100 0 0001135677777777656888888874 788
Q ss_pred HHHHHHhcCCeeEEeeccCcccc-----cccchHHHHHHHhCC
Q 026625 169 TIRRAHAVHPITAVQLEWSLWAR-----DIENEIVPLCRELGI 206 (235)
Q Consensus 169 ~l~~~~~~~~~~~~q~~~n~~~~-----~~~~~l~~~~~~~gi 206 (235)
++.+++... .+.+|+-=.++.. ....++-++.+++|.
T Consensus 245 da~~~l~~G-Ad~V~igra~l~~p~~~~~i~~~l~~~~~~~g~ 286 (296)
T cd04740 245 DALEFLMAG-ASAVQVGTANFVDPEAFKEIIEGLEAYLDEEGI 286 (296)
T ss_pred HHHHHHHcC-CCEEEEchhhhcChHHHHHHHHHHHHHHHHcCC
Confidence 999988754 6888875333331 112556667777764
|
DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 235 | ||||
| 3v0u_A | 338 | Crystal Structure Of Perakine Reductase, Founder Me | 1e-97 | ||
| 3v0t_A | 337 | Crystal Structure Of Perakine Reductase, Founder Me | 1e-97 | ||
| 3uyi_A | 337 | Crystal Structure Of Perakine Reductase, Founder Me | 2e-97 | ||
| 3v0s_A | 337 | Crystal Structure Of Perakine Reductase, Founder Me | 7e-95 | ||
| 1pyf_A | 312 | Structure Of Nadph-Dependent Family 11 Aldo-Keto Re | 3e-30 | ||
| 1ynp_A | 317 | Aldo-keto Reductase Akr11c1 From Bacillus Haloduran | 6e-27 | ||
| 1pz1_A | 333 | Structure Of Nadph-Dependent Family 11 Aldo-Keto Re | 3e-25 | ||
| 3n2t_A | 348 | Structure Of The Glycerol Dehydrogenase Akr11b4 Fro | 4e-25 | ||
| 4aub_A | 366 | The Complex Structure Of The Bacterial Aldo-Keto Re | 6e-22 | ||
| 3n6q_A | 346 | Crystal Structure Of Yghz From E. Coli Length = 346 | 6e-22 | ||
| 3erp_A | 353 | Structure Of Idp01002, A Putative Oxidoreductase Fr | 1e-21 | ||
| 3lut_A | 367 | A Structural Model For The Full-Length Shaker Potas | 1e-18 | ||
| 3eau_A | 327 | Voltage-Dependent K+ Channel Beta Subunit In Comple | 2e-18 | ||
| 1zsx_A | 347 | Crystal Structure Of Human Potassium Channel Kv Bet | 2e-18 | ||
| 3eb4_A | 327 | Voltage-Dependent K+ Channel Beta Subunit (I211r) I | 2e-18 | ||
| 1qrq_A | 325 | Structure Of A Voltage-Dependent K+ Channel Beta Su | 2e-18 | ||
| 2a79_A | 333 | Mammalian Shaker Kv1.2 Potassium Channel- Beta Subu | 2e-18 | ||
| 1exb_A | 332 | Structure Of The Cytoplasmic Beta Subunit-T1 Assemb | 2e-18 | ||
| 3eb3_A | 327 | Voltage-Dependent K+ Channel Beta Subunit (W121a) I | 3e-18 | ||
| 2bp1_B | 360 | Structure Of The Aflatoxin Aldehyde Reductase In Co | 6e-12 | ||
| 2c91_A | 338 | Mouse Succinic Semialdehyde Reductase, Akr7a5 Lengt | 6e-12 | ||
| 2clp_A | 347 | Crystal Structure Of Human Aflatoxin B1 Aldehyde Re | 6e-12 | ||
| 1og6_A | 298 | Ydhf, An Aldo-keto Reductase From E.coli Complexed | 8e-12 | ||
| 3up8_A | 298 | Crystal Structure Of A Putative 2,5-Diketo-D-Glucon | 7e-11 | ||
| 1ur3_M | 319 | Crystal Structure Of The Apo Form Of The E.Coli Ydh | 8e-11 | ||
| 4gac_A | 324 | High Resolution Structure Of Mouse Aldehyde Reducta | 8e-11 | ||
| 3o0k_A | 283 | Crystal Structure Of AldoKETO REDUCTASE FROM BRUCEL | 9e-11 | ||
| 1gve_A | 327 | Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Live | 5e-10 | ||
| 1qwk_A | 317 | Structural Genomics Of Caenorhabditis Elegans: Hypo | 1e-09 | ||
| 1lqa_A | 346 | Tas Protein From Escherichia Coli In Complex With N | 1e-09 | ||
| 3cv7_A | 325 | Crystal Structure Of Porcine Aldehyde Reductase Ter | 2e-09 | ||
| 1ae4_A | 325 | Aldehyde Reductase Complexed With Cofactor And Inhi | 4e-09 | ||
| 1cwn_A | 324 | Crystal Structure Of Porcine Aldehyde Reductase Hol | 4e-09 | ||
| 2alr_A | 324 | Aldehyde Reductase Length = 324 | 4e-09 | ||
| 1vp5_A | 298 | Crystal Structure Of 2,5-diketo-d-gluconic Acid Red | 7e-09 | ||
| 1hqt_A | 326 | The Crystal Structure Of An Aldehyde Reductase Y50f | 7e-09 | ||
| 2wzm_A | 283 | Crystal Structure Of A Mycobacterium Aldo-Keto Redu | 1e-08 | ||
| 4fzi_A | 290 | Crystal Structure Of Prostaglandin F Synthase From | 2e-08 | ||
| 3krb_A | 334 | Structure Of Aldose Reductase From Giardia Lamblia | 6e-08 | ||
| 2bgq_A | 344 | Apo Aldose Reductase From Barley Length = 344 | 2e-07 | ||
| 4f40_A | 288 | X-Ray Crystal Structure Of Apo Prostaglandin F Synt | 8e-07 | ||
| 1vbj_A | 281 | The Crystal Structure Of Prostaglandin F Synthase F | 2e-06 | ||
| 1jez_A | 322 | The Structure Of Xylose Reductase, A Dimeric Aldo-K | 6e-06 | ||
| 1sm9_A | 322 | Crystal Structure Of An Engineered K274rn276d Doubl | 6e-06 | ||
| 1ye4_A | 322 | Crystal Structure Of The Lys-274 To Arg Mutant Of C | 6e-06 | ||
| 1z9a_A | 321 | Crystal Structure Of The Asn-309 To Asp Mutant Of C | 6e-06 | ||
| 1r38_A | 322 | Crystal Structure Of H114a Mutant Of Candida Tenuis | 1e-05 | ||
| 3h7r_A | 331 | Crystal Structure Of The Plant Stress-Response Enzy | 2e-05 | ||
| 1mzr_A | 296 | Structure Of Dkga From E.Coli At 2.13 A Resolution | 1e-04 |
| >pdb|3V0U|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 338 | Back alignment and structure |
|
| >pdb|3V0T|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 | Back alignment and structure |
|
| >pdb|3UYI|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 | Back alignment and structure |
|
| >pdb|3V0S|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of A Novel Akr Subfamily With Unique Conformational Changes During Nadph Binding Length = 337 | Back alignment and structure |
|
| >pdb|1PYF|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase Akr11a(Apo) Length = 312 | Back alignment and structure |
|
| >pdb|1YNP|A Chain A, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo Form) Length = 317 | Back alignment and structure |
|
| >pdb|1PZ1|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase Akr11b(Holo) Length = 333 | Back alignment and structure |
|
| >pdb|3N2T|A Chain A, Structure Of The Glycerol Dehydrogenase Akr11b4 From Gluconobacter Oxydans Length = 348 | Back alignment and structure |
|
| >pdb|4AUB|A Chain A, The Complex Structure Of The Bacterial Aldo-Keto Reductase Akr14a1 With Nadp And Citrate Length = 366 | Back alignment and structure |
|
| >pdb|3N6Q|A Chain A, Crystal Structure Of Yghz From E. Coli Length = 346 | Back alignment and structure |
|
| >pdb|3ERP|A Chain A, Structure Of Idp01002, A Putative Oxidoreductase From And Essential Gene Of Salmonella Typhimurium Length = 353 | Back alignment and structure |
|
| >pdb|3LUT|A Chain A, A Structural Model For The Full-Length Shaker Potassium Channel Kv1.2 Length = 367 | Back alignment and structure |
|
| >pdb|3EAU|A Chain A, Voltage-Dependent K+ Channel Beta Subunit In Complex With Cortisone Length = 327 | Back alignment and structure |
|
| >pdb|1ZSX|A Chain A, Crystal Structure Of Human Potassium Channel Kv Beta-Subunit (Kcnab2) Length = 347 | Back alignment and structure |
|
| >pdb|3EB4|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (I211r) In Complex With Cortisone Length = 327 | Back alignment and structure |
|
| >pdb|1QRQ|A Chain A, Structure Of A Voltage-Dependent K+ Channel Beta Subunit Length = 325 | Back alignment and structure |
|
| >pdb|2A79|A Chain A, Mammalian Shaker Kv1.2 Potassium Channel- Beta Subunit Complex Length = 333 | Back alignment and structure |
|
| >pdb|1EXB|A Chain A, Structure Of The Cytoplasmic Beta Subunit-T1 Assembly Of Voltage-Dependent K Channels Length = 332 | Back alignment and structure |
|
| >pdb|3EB3|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (W121a) In Complex With Cortisone Length = 327 | Back alignment and structure |
|
| >pdb|2C91|A Chain A, Mouse Succinic Semialdehyde Reductase, Akr7a5 Length = 338 | Back alignment and structure |
|
| >pdb|2CLP|A Chain A, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase Member 3 Length = 347 | Back alignment and structure |
|
| >pdb|1OG6|A Chain A, Ydhf, An Aldo-keto Reductase From E.coli Complexed With Nadph Length = 298 | Back alignment and structure |
|
| >pdb|3UP8|A Chain A, Crystal Structure Of A Putative 2,5-Diketo-D-Gluconic Acid Reductase B Length = 298 | Back alignment and structure |
|
| >pdb|1UR3|M Chain M, Crystal Structure Of The Apo Form Of The E.Coli Ydhf Protein Length = 319 | Back alignment and structure |
|
| >pdb|4GAC|A Chain A, High Resolution Structure Of Mouse Aldehyde Reductase (akr1a4) In Its Apo-form Length = 324 | Back alignment and structure |
|
| >pdb|3O0K|A Chain A, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA MELITENSIS Length = 283 | Back alignment and structure |
|
| >pdb|1GVE|A Chain A, Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Liver Length = 327 | Back alignment and structure |
|
| >pdb|1QWK|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Hypothetical 35.2 Kda Protein (Aldose Reductase Family Member) Length = 317 | Back alignment and structure |
|
| >pdb|1LQA|A Chain A, Tas Protein From Escherichia Coli In Complex With Nadph Length = 346 | Back alignment and structure |
|
| >pdb|3CV7|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Ternary Complex Length = 325 | Back alignment and structure |
|
| >pdb|1AE4|A Chain A, Aldehyde Reductase Complexed With Cofactor And Inhibitor, Alpha Carbon Atoms Only Length = 325 | Back alignment and structure |
|
| >pdb|1CWN|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Holoenzyme Length = 324 | Back alignment and structure |
|
| >pdb|2ALR|A Chain A, Aldehyde Reductase Length = 324 | Back alignment and structure |
|
| >pdb|1VP5|A Chain A, Crystal Structure Of 2,5-diketo-d-gluconic Acid Reductase (tm1009) From Thermotoga Maritima At 2.40 A Resolution Length = 298 | Back alignment and structure |
|
| >pdb|1HQT|A Chain A, The Crystal Structure Of An Aldehyde Reductase Y50f Mutant- Nadp Complex And Its Implications For Substrate Binding Length = 326 | Back alignment and structure |
|
| >pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase In Its Apo And Liganded Form Length = 283 | Back alignment and structure |
|
| >pdb|4FZI|A Chain A, Crystal Structure Of Prostaglandin F Synthase From Trypanosoma Cruzi Length = 290 | Back alignment and structure |
|
| >pdb|3KRB|A Chain A, Structure Of Aldose Reductase From Giardia Lamblia At 1.75a Resolution Length = 334 | Back alignment and structure |
|
| >pdb|2BGQ|A Chain A, Apo Aldose Reductase From Barley Length = 344 | Back alignment and structure |
|
| >pdb|4F40|A Chain A, X-Ray Crystal Structure Of Apo Prostaglandin F Synthase From Leishmania Major Friedlin Length = 288 | Back alignment and structure |
|
| >pdb|1VBJ|A Chain A, The Crystal Structure Of Prostaglandin F Synthase From Trypanosoma Brucei Length = 281 | Back alignment and structure |
|
| >pdb|1JEZ|A Chain A, The Structure Of Xylose Reductase, A Dimeric Aldo-Keto Reductase From Candida Tenuis Length = 322 | Back alignment and structure |
|
| >pdb|1SM9|A Chain A, Crystal Structure Of An Engineered K274rn276d Double Mutant Of Xylose Reductase From Candida Tenuis Optimized To Utilize Nad Length = 322 | Back alignment and structure |
|
| >pdb|1YE4|A Chain A, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida Tenuis Xylose Reductase (Akr2b5) Bound To Nad+ Length = 322 | Back alignment and structure |
|
| >pdb|1Z9A|A Chain A, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida Tenuis Xylose Reductase (Akr2b5) Bound To Nad+ Length = 321 | Back alignment and structure |
|
| >pdb|1R38|A Chain A, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose Reductase Length = 322 | Back alignment and structure |
|
| >pdb|3H7R|A Chain A, Crystal Structure Of The Plant Stress-Response Enzyme Akr4c8 Length = 331 | Back alignment and structure |
|
| >pdb|1MZR|A Chain A, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved By Molecular Replacement Length = 296 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 235 | |||
| 1pyf_A | 312 | IOLS protein; beta-alpha barrel, aldo-keto reducta | 1e-135 | |
| 3n2t_A | 348 | Putative oxidoreductase; aldo/keto reductase super | 1e-135 | |
| 1pz1_A | 333 | GSP69, general stress protein 69; beta-alpha barre | 1e-118 | |
| 3v0s_A | 337 | Perakine reductase; AKR superfamily, oxidoreductas | 1e-112 | |
| 1ynp_A | 317 | Oxidoreductase, AKR11C1; aldo-keto reductase, NADP | 1e-106 | |
| 1ur3_M | 319 | Hypothetical oxidoreductase YDHF; NADP binding, al | 1e-101 | |
| 2bp1_A | 360 | Aflatoxin B1 aldehyde reductase member 2; oxidored | 4e-67 | |
| 1gve_A | 327 | Aflatoxin B1 aldehyde reductase member 3; oxidored | 1e-64 | |
| 3erp_A | 353 | Putative oxidoreductase; funded by the national in | 1e-62 | |
| 3eau_A | 327 | Voltage-gated potassium channel subunit beta-2; kv | 2e-60 | |
| 3n6q_A | 346 | YGHZ aldo-keto reductase; TIM barrel, oxidoreducta | 2e-59 | |
| 3lut_A | 367 | Voltage-gated potassium channel subunit beta-2; vo | 6e-59 | |
| 1lqa_A | 346 | TAS protein; TIM barrel, structure 2 function proj | 2e-47 | |
| 1qwk_A | 317 | Aldose reductase, aldo-keto reductase family 1 mem | 8e-24 | |
| 3up8_A | 298 | Putative 2,5-diketo-D-gluconic acid reductase B; n | 4e-23 | |
| 3buv_A | 326 | 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reduc | 1e-22 | |
| 1s1p_A | 331 | Aldo-keto reductase family 1 member C3; TIM-barrel | 9e-22 | |
| 1us0_A | 316 | Aldose reductase; oxidoreductase, NADP, IDD594; HE | 4e-21 | |
| 2bgs_A | 344 | Aldose reductase; holoenzyme, aldo/keto reductase, | 4e-21 | |
| 2ao0_A | 324 | Aldehyde dehydrogenase; TIM barrel, aldo-keto redu | 5e-21 | |
| 1zgd_A | 312 | Chalcone reductase; polyketide, deoxychalcone, iso | 9e-21 | |
| 1mi3_A | 322 | Xylose reductase, XR; aldo-keto reductase, beta-al | 1e-20 | |
| 2wzm_A | 283 | Aldo-keto reductase; oxidoreductase; HET: NA7; 1.6 | 1e-20 | |
| 1afs_A | 323 | 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; | 1e-20 | |
| 4f40_A | 288 | Prostaglandin F2-alpha synthase/D-arabinose dehyd; | 2e-20 | |
| 3o3r_A | 316 | Aldo-keto reductase family 1, member B7; aldose re | 3e-20 | |
| 3h7u_A | 335 | Aldo-keto reductase; stress response, NADP, drough | 3e-20 | |
| 1vp5_A | 298 | 2,5-diketo-D-gluconic acid reductase; TM1009, stru | 3e-20 | |
| 3o0k_A | 283 | Aldo/keto reductase; ssgcid, ALS collaborative cry | 4e-20 | |
| 3krb_A | 334 | Aldose reductase; ssgcid, SBRI, emerald biostructu | 5e-20 | |
| 1vbj_A | 281 | Prostaglandin F synthase; TIM barrel, oxidoreducta | 1e-19 | |
| 1hw6_A | 278 | 2,5-diketo-D-gluconic acid reductase; aldo-keto re | 1e-19 | |
| 3b3e_A | 310 | YVGN protein; aldo-keto reductase, oxidoreductase; | 5e-19 | |
| 3h7r_A | 331 | Aldo-keto reductase; stress response, NADP, drough | 6e-19 | |
| 4gie_A | 290 | Prostaglandin F synthase; structural genomics, nia | 6e-19 | |
| 3f7j_A | 276 | YVGN protein; aldo-keto reductase, oxidoreductase; | 9e-19 | |
| 1mzr_A | 296 | 2,5-diketo-D-gluconate reductase A; alpha/beta-bar | 6e-18 | |
| 3ln3_A | 324 | Dihydrodiol dehydrogenase; putative reductase, str | 2e-14 |
| >1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A* Length = 312 | Back alignment and structure |
|---|
Score = 381 bits (982), Expect = e-135
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 2/213 (0%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSG-CYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
+ KLG L+V +G G ++ G L+EE G +++ A G+T DTA YG
Sbjct: 3 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGR 62
Query: 70 NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
+E L+G+ L+E RE++ +ATK + G + +P++++ + SL+RL+ +YIDL
Sbjct: 63 SEELIGEVLREFNREDVVIATKAAHRKQG-NDFVFDNSPDFLKKSVDESLKRLNTDYIDL 121
Query: 130 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLW 189
+Y H D P +E + + ++ + GKI+ IG+S S + ++ A+ + +Q E++L
Sbjct: 122 FYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLL 181
Query: 190 ARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
R+ E P +E I +PY PL G GK
Sbjct: 182 NREAEKTFFPYTKEHNISFIPYFPLVSGLLAGK 214
|
| >3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} Length = 348 | Back alignment and structure |
|---|
Score = 382 bits (984), Expect = e-135
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 5/226 (2%)
Query: 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFD 60
+ + +++ +S++ G ++ G +++G+ I A +GI D
Sbjct: 11 VPRGSHMASDTIRIPGIDTPLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLID 70
Query: 61 TADKYGPYTNEILLGKALKELPRENIQVATKFGFV----ELGFTSVIVKGTPEYVRSCCE 116
TA YG +E ++G+AL E VATK G + V P +R E
Sbjct: 71 TAPVYGFGHSEEIVGRALAEK-PNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVE 129
Query: 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV 176
SLRRL VE IDL H D PI+E+ E++KL ++GKI+ +G+S SP+ + V
Sbjct: 130 DSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREV 189
Query: 177 HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
P+ +Q +L+ R IE +I+P + ++ Y L RG GK
Sbjct: 190 APLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGK 235
|
| >1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1 Length = 333 | Back alignment and structure |
|---|
Score = 339 bits (873), Expect = e-118
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 2/212 (0%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
+ G+E S++G G ++ G E+ I I+ A +GIT DTA YG +E
Sbjct: 4 TSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSE 63
Query: 72 ILLGKALKEL-PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLY 130
++GKA+KE R+ + +ATK + + E SL+RL +YIDLY
Sbjct: 64 EIVGKAIKEYMKRDQVILATKTALD-WKNNQLFRHANRARIVEEVENSLKRLQTDYIDLY 122
Query: 131 YQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWA 190
H D VPIEET MK+L + GKI+ IG+S S + + AV P+ +Q ++L+
Sbjct: 123 QVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFE 182
Query: 191 RDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
R++E ++P ++ I + Y L RG GK
Sbjct: 183 REMEESVLPYAKDNKITTLLYGSLCRGLLTGK 214
|
| >3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A* Length = 337 | Back alignment and structure |
|---|
Score = 323 bits (830), Expect = e-112
Identities = 164/226 (72%), Positives = 193/226 (85%), Gaps = 1/226 (0%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
+PRVKLGTQGLEVSKLG+GCM LSG YN L EE GI++IK AF+ GITFFDT+D YG
Sbjct: 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGEN 60
Query: 69 -TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
+NE LLGKALK+LPRE IQV TKFG E+GF+ V GTP+YVRSCCEASL+RLDV+YI
Sbjct: 61 GSNEELLGKALKQLPREXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYI 120
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DL+Y HR+DT+VPIE T+GE+ LVEEGKI Y+GLSEASPDTIRRAHAVHP+TA+Q+E+S
Sbjct: 121 DLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAVHPVTALQIEYS 180
Query: 188 LWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVPLDSF 233
LW RDIE+EIVPLCR+LGIGIVPY P+GRG F GKA+ ES+P +S
Sbjct: 181 LWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLPENSV 226
|
| >1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A* Length = 317 | Back alignment and structure |
|---|
Score = 307 bits (788), Expect = e-106
Identities = 76/212 (35%), Positives = 109/212 (51%), Gaps = 9/212 (4%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
+LGT L VS+LG+GCMSL E I+ GI + DTAD Y NE
Sbjct: 24 RQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNE 77
Query: 72 ILLGKALKELPRENIQVATKFGFV-ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLY 130
+GKALK R++I +ATK G E G + Y++ + SLRRL +YIDLY
Sbjct: 78 QFVGKALKG-RRQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLY 136
Query: 131 YQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWA 190
H PI+ETI ++L +EG I+Y G+S P+ I+ I ++ +++S+
Sbjct: 137 QLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSNIVSIMMQYSILD 196
Query: 191 RDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
R E E PL +E G+ +V P+ RG +
Sbjct: 197 RRPE-EWFPLIQEHGVSVVVRGPVARGLLSRR 227
|
| >1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A* Length = 319 | Back alignment and structure |
|---|
Score = 295 bits (758), Expect = e-101
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 11/219 (5%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN 70
R+ + QG E S+ G L +S +S I+ G+T D AD YG Y
Sbjct: 25 RITIAPQGPEFSRFVMGYWRLMD---WNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQC 81
Query: 71 EILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG---TPEYVRSCCEASLRRLDVE 125
E G+ALK P RE +++ +K G ++ +++ E SL L +
Sbjct: 82 EAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATD 141
Query: 126 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQ 183
++DL HR D + +E K L + GK+++ G+S +P + + Q
Sbjct: 142 HLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQ 201
Query: 184 LEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGG 221
+E S + + + + ++L + + + LG G
Sbjct: 202 VEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFN 240
|
| >1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A* Length = 327 | Back alignment and structure |
|---|
Score = 202 bits (517), Expect = 1e-64
Identities = 52/210 (24%), Positives = 79/210 (37%), Gaps = 18/210 (8%)
Query: 21 VSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE 80
G M + + ++ +G T DTA Y +E +LG
Sbjct: 5 RPATVLGAME----MGRRMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLG 60
Query: 81 LP--RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS 138
L +++ATK + P VR E SL+RL +DL+Y H D
Sbjct: 61 LGRSGCKVKIATKAAPMFGKTLK------PADVRFQLETSLKRLQCPRVDLFYLHFPDHG 114
Query: 139 VPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV------HPITAVQLEWSLWARD 192
PIEET+ +L +EGK +GLS + + T Q ++ R
Sbjct: 115 TPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQ 174
Query: 193 IENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
+E E+ P R G+ + PL G G+
Sbjct: 175 VETELFPCLRHFGLRFYAFNPLAGGLLTGR 204
|
| >3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp} Length = 353 | Back alignment and structure |
|---|
Score = 198 bits (506), Expect = 1e-62
Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 34/231 (14%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY--T 69
+ G G+++ + G + E+ ++++ AF GIT FD A+ YGP +
Sbjct: 37 RRCGRSGVKLPAISLGLW---HNFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGS 93
Query: 70 NEILLGKALKELP---RENIQVATKFGFVELGFTSVIVKGTPE----------YVRSCCE 116
E G+ L+E R+ + ++TK G+ + Y+ + +
Sbjct: 94 AECNFGRILQEDFLPWRDELIISTKAGY-----------TMWDGPYGDWGSRKYLIASLD 142
Query: 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV 176
SL+R+ +EY+D++Y HR D P++ET+ + LV GK Y+G+S D R+A +
Sbjct: 143 QSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQAIDI 202
Query: 177 -----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
P Q ++SL+ R +E+ ++ L +E G+G + + PL G +
Sbjct: 203 LEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDR 253
|
| >3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A* Length = 327 | Back alignment and structure |
|---|
Score = 192 bits (489), Expect = 2e-60
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 13 KLGTQGLEVSKLGYGC-MSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
LG GL VS LG G ++ + +++E ++ A+ GI FDTA+ Y E
Sbjct: 7 NLGKSGLRVSCLGLGTWVT----FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAE 62
Query: 72 ILLGKALKEL--PRENIQVATKFGFVELGFTSVIVKGTPE---------YVRSCCEASLR 120
++LG +K+ R ++ + TK + G ++ +ASL
Sbjct: 63 VVLGNIIKKKGWRRSSLVITTKIFW-----------GGKAETERGLSRKHIIEGLKASLE 111
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV---- 176
RL +EY+D+ + +R D + P+EET+ M ++ +G Y G S S I A++V
Sbjct: 112 RLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQF 171
Query: 177 --HPITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
P Q E+ ++ R+ +E ++ L ++G+G + + PL G GK
Sbjct: 172 NLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 220
|
| >3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 190 bits (484), Expect = 2e-59
Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 35/231 (15%)
Query: 13 KLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY--TN 70
G GL + L G + + E +I++ AF GIT FD A+ YGP +
Sbjct: 17 YCGKSGLRLPALSLGLW---HNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSA 73
Query: 71 EILLGKALKE---LPRENIQVATKFGFVELGFTSVIVKGTPE----------YVRSCCEA 117
E G+ L+E R+ + ++TK G+ Y+ + +
Sbjct: 74 EENFGRLLREDFAAYRDELIISTKAGY-----------DMWPGPYGSGGSRKYLLASLDQ 122
Query: 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV- 176
SL+R+ +EY+D++Y HRVD + P+EET + V+ GK Y+G+S SP+ ++ +
Sbjct: 123 SLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELL 182
Query: 177 ----HPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGK 222
P+ Q ++L R ++ + ++ + G+G + + PL +G GK
Sbjct: 183 REWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGK 233
|
| >3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus} Length = 367 | Back alignment and structure |
|---|
Score = 189 bits (482), Expect = 6e-59
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 34/229 (14%)
Query: 13 KLGTQGLEVSKLGYGC-MSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
LG GL VS LG G ++ + +++E ++ A+ GI FDTA+ Y E
Sbjct: 41 NLGKSGLRVSCLGLGTWVT----FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAE 96
Query: 72 ILLGKALKEL--PRENIQVATKFGFVELGFTSVIVKGTPE---------YVRSCCEASLR 120
++LG +K+ R ++ + TK + G ++ +ASL
Sbjct: 97 VVLGNIIKKKGWRRSSLVITTKIFW-----------GGKAETERGLSRKHIIEGLKASLE 145
Query: 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV---- 176
RL +EY+D+ + +R D + P+EET+ M ++ +G Y G S S I A++V
Sbjct: 146 RLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQF 205
Query: 177 --HPITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
P Q E+ ++ R+ +E ++ L ++G+G + + PL G GK
Sbjct: 206 NLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 254
|
| >1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1 Length = 346 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 2e-47
Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 13 KLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN-- 70
++ LEVS LG G M+ + SE D + + +A ++GI D A+ Y
Sbjct: 5 RIPHSSLEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60
Query: 71 -----EILLGKALKEL-PRENIQVATKFGFVELGFTSVIVKGTP---EYVRSCCEASLRR 121
E +G L + RE + +A+K I + +R SL+R
Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR 120
Query: 122 LDVEYIDLYYQHRVD-----------------TSVPIEETIGEMKKLVEEGKIKYIGLS- 163
L +Y+DLY H +V + +T+ + + GKI+YIG+S
Sbjct: 121 LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN 180
Query: 164 EASPDTIR-----RAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218
E + +R H + I +Q +SL R E + + + G+ ++ Y LG G
Sbjct: 181 ETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGT 240
Query: 219 FGGK 222
GK
Sbjct: 241 LTGK 244
|
| >1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1 Length = 317 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 8e-24
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 40/227 (17%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+KL G+E+ +G G + S + I+ +K A G DTA Y
Sbjct: 4 ATASIKLSN-GVEMPVIGLGT------WQSS--PAEVITAVKTAVKAGYRLIDTASVYQ- 53
Query: 68 YTNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121
NE +G A+KE + RE + + TK EL P + SL++
Sbjct: 54 --NEEAIGTAIKELLEEGVVKREELFITTKAWTHELA---------PGKLEGGLRESLKK 102
Query: 122 LDVEYIDLYYQH---------RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR 172
L +EY+DLY H + P+E+ + + + G K +G+S + D I R
Sbjct: 103 LQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISR 162
Query: 173 --AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
A + P+ Q+E L +++ V C++ I + Y LG
Sbjct: 163 ALALGLTPVHNSQVE--LHLYFPQHDHVDFCKKHNISVTSYATLGSP 207
|
| >3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti} Length = 298 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 4e-23
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 27/217 (12%)
Query: 5 KKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADK 64
+ + G + LG+G +SG + + I+ A G DTA
Sbjct: 19 YFQSMMHAVS-SNGANIPALGFGTFRMSG--------AEVLRILPQALKLGFRHVDTAQI 69
Query: 65 YGPYTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRL 122
YG NE +G+A+++ +PR ++ + TK + + + SLR+L
Sbjct: 70 YG---NEAEVGEAIQKSGIPRADVFLTTKVWVDNYR---------HDAFIASVDESLRKL 117
Query: 123 DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT-A 181
+++DL H + VP+ E IG + ++ GK+++IG+S + + A + A
Sbjct: 118 RTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIA 177
Query: 182 V-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
Q+E+ + + +++ R LG+ + Y + G
Sbjct: 178 TNQVEYHPYLD--QTKVLQTARRLGMSLTSYYAMANG 212
|
| >3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A* Length = 326 | Back alignment and structure |
|---|
Score = 93.0 bits (232), Expect = 1e-22
Identities = 58/254 (22%), Positives = 91/254 (35%), Gaps = 52/254 (20%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDG--ISIIKHAFSKGITFFDTADKY 65
R+ L G + +G G Y+ P S G + +K A G D A Y
Sbjct: 6 ASHRIPLSD-GNSIPIIGLGT------YSEPKSTPKGACATSVKVAIDTGYRHIDGAYIY 58
Query: 66 GPYTNEILLGKALKEL------PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119
NE +G+A++E RE+I K L T+ PE VR E +L
Sbjct: 59 Q---NEHEVGEAIREKIAEGKVRREDIFYCGK-----LWATNH----VPEMVRPTLERTL 106
Query: 120 RRLDVEYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYI 160
R L ++Y+DLY + + T M+ + G +K +
Sbjct: 107 RVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSL 166
Query: 161 GLSEASPDTIRR----AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGR 216
G+S + + H + Q+E + +++ C++ I I Y PLG
Sbjct: 167 GVSNFNRRQLELILNKPGLKHKPVSNQVE--CHPYFTQPKLLKFCQQHDIVITAYSPLGT 224
Query: 217 GFFGGKAVVESVPL 230
V S PL
Sbjct: 225 SRNPIWVNVSSPPL 238
|
| >1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ... Length = 331 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 9e-22
Identities = 55/253 (21%), Positives = 87/253 (34%), Gaps = 51/253 (20%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNS-PLSEEDGISIIKHAFSKGITFFDTADKYG 66
+ VKL G + LG+G Y + + + K A G D+A Y
Sbjct: 4 KQQCVKLND-GHFMPVLGFGT------YAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYN 56
Query: 67 PYTNEILLGKALKEL------PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
NE +G A++ RE+I +K L T PE VR E SL+
Sbjct: 57 ---NEEQVGLAIRSKIADGSVKREDIFYTSK-----LWSTF----HRPELVRPALENSLK 104
Query: 121 RLDVEYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYIG 161
+ ++Y+DLY H + V + T M+K + G K IG
Sbjct: 105 KAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIG 164
Query: 162 LSEASPDTIRR----AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+S + + + Q+E ++++ C+ I +V Y LG
Sbjct: 165 VSNFNRRQLEMILNKPGLKYKPVCNQVE--CHPYFNRSKLLDFCKSKDIVLVAYSALGSQ 222
Query: 218 FFGGKAVVESVPL 230
S L
Sbjct: 223 RDKRWVDPNSPVL 235
|
| >1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 88.7 bits (221), Expect = 4e-21
Identities = 57/251 (22%), Positives = 93/251 (37%), Gaps = 52/251 (20%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
R+ L G ++ LG G + SP +K A G D A Y
Sbjct: 3 SRILLNN-GAKMPILGLGT------WKSP--PGQVTEAVKVAIDVGYRHIDCAHVYQ--- 50
Query: 70 NEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLD 123
NE +G A++E + RE + + +K L T V+ C+ +L L
Sbjct: 51 NENEVGVAIQEKLREQVVKREELFIVSK-----LWCTYH----EKGLVKGACQKTLSDLK 101
Query: 124 VEYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164
++Y+DLY H V + I +T M++LV+EG +K IG+S
Sbjct: 102 LDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISN 161
Query: 165 ASPDTIRR--AHAVHPIT-AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220
+ + AV Q+E + +++ C+ GI + Y PLG
Sbjct: 162 FNHLQVEMILNKPGLKYKPAVNQIE--CHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRP 219
Query: 221 GKAVVESVPLD 231
+ L+
Sbjct: 220 WAKPEDPSLLE 230
|
| >2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A* Length = 344 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 4e-21
Identities = 57/236 (24%), Positives = 90/236 (38%), Gaps = 53/236 (22%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+ L + G + +G G + + + S+ G DTA +YG
Sbjct: 36 EQDHFVLKS-GHAMPAVGLGT------WRAG--SDTAHSVRTAITEAGYRHVDTAAEYG- 85
Query: 68 YTNEILLGKALKE-----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRL 122
E +GK LK + R+++ V +K L PE VR E +L+ L
Sbjct: 86 --VEKEVGKGLKAAMEAGIDRKDLFVTSKIWCTNLA---------PERVRPALENTLKDL 134
Query: 123 DVEYIDLYYQH---------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 167
++YIDLY+ H +E EM+ LV++G +K IG+ +
Sbjct: 135 QLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTV 194
Query: 168 DTIRR--AHAVHPITAVQLE----WSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+ R A P Q+E W ++I C++ GI I Y PLG
Sbjct: 195 TKLNRLLRSAKIPPAVCQMEMHPGWK------NDKIFEACKKHGIHITAYSPLGSS 244
|
| >1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa} Length = 312 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 9e-21
Identities = 58/250 (23%), Positives = 96/250 (38%), Gaps = 58/250 (23%)
Query: 8 QVPRVKL--GTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKY 65
++P L + L++ +G G ++D I A +G FDTA Y
Sbjct: 5 EIPTKVLTNTSSQLKMPVVGMGS------APDFTCKKDTKDAIIEAIKQGYRHFDTAAAY 58
Query: 66 GPYTNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119
G +E LG+ALKE + R+++ V +K E P V + SL
Sbjct: 59 G---SEQALGEALKEAIELGLVTRDDLFVTSKLWVTENH---------PHLVIPALQKSL 106
Query: 120 RRLDVEYIDLYYQH----------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163
+ L ++Y+DLY H ++ M++ ++ G K IG+S
Sbjct: 107 KTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLTKAIGVS 166
Query: 164 EASPDTIRR--AHA-VHPITAV-QLE----WSLWARDIENEIVPLCRELGIGIVPYCPLG 215
S + + A V P AV Q+E W + ++ C GI + + P+
Sbjct: 167 NFSVKKLENLLSVATVLP--AVNQVEMNLAWQ------QKKLREFCNAHGIVLTAFSPVR 218
Query: 216 RGFFGGKAVV 225
+G G V
Sbjct: 219 KGASRGPNEV 228
|
| >1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A* Length = 322 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 1e-20
Identities = 56/245 (22%), Positives = 89/245 (36%), Gaps = 56/245 (22%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+P +KL + G + +G+GC + + A G FD A+ YG
Sbjct: 4 SIPDIKLSS-GHLMPSIGFGC------WKLA--NATAGEQVYQAIKAGYRLFDGAEDYG- 53
Query: 68 YTNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121
NE +G +K + RE I + +K L P+ V + +L
Sbjct: 54 --NEKEVGDGVKRAIDEGLVKREEIFLTSK-----LWNN----YHDPKNVETALNKTLAD 102
Query: 122 LDVEYIDLYYQH-------------------------RVDTSVPIEETIGEMKKLVEEGK 156
L V+Y+DL+ H V VPI ET ++KLV GK
Sbjct: 103 LKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGK 162
Query: 157 IKYIGLSEASPDTIRR--AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPL 214
IK IG+S + A +Q+E + +++ ++ G+ I Y
Sbjct: 163 IKSIGVSNFPGALLLDLLRGATIKPAVLQVE--HHPYLQQPKLIEFAQKAGVTITAYSSF 220
Query: 215 GRGFF 219
G F
Sbjct: 221 GPQSF 225
|
| >2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A Length = 283 | Back alignment and structure |
|---|
Score = 86.8 bits (216), Expect = 1e-20
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 36/218 (16%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
+P V L + +G G LS+ + + A G DTA YG
Sbjct: 11 IPTVTL-NDDNTLPVVGIGV------G--ELSDSEAERSVSAALEAGYRLIDTAAAYG-- 59
Query: 69 TNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEY 126
NE +G+A+ +PR+ I V TK + GF ++ ASL RL ++Y
Sbjct: 60 -NEAAVGRAIAASGIPRDEIYVTTKLATPDQGF---------TSSQAAARASLERLGLDY 109
Query: 127 IDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT-A 181
+DLY H V ++ G + K+ E+G + IG+ + + ++ T A
Sbjct: 110 VDLYLIHWPGGDTSKYV---DSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPA 166
Query: 182 V-QLEWS-LWARDIENEIVPLCRELGIGIVPYCPLGRG 217
V Q+E L + + + I Y PLG G
Sbjct: 167 VNQIELHPLLNQA---ALREVNAGYNIVTEAYGPLGVG 201
|
| >1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A* Length = 323 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 1e-20
Identities = 58/251 (23%), Positives = 94/251 (37%), Gaps = 51/251 (20%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGI-SIIKHAFSKGITFFDTADKYGPY 68
RV L G + LG+G +D + K A G FD+A Y
Sbjct: 6 LRVALND-GNFIPVLGFGT------TVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYE-- 56
Query: 69 TNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRL 122
E +G+A++ + RE+I +K L T PE VR+C E +L+
Sbjct: 57 -VEEEVGQAIRSKIEDGTVKREDIFYTSK-----LWST----FHRPELVRTCLEKTLKST 106
Query: 123 DVEYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163
++Y+DLY H + +V I +T M+K + G K IG+S
Sbjct: 107 QLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVS 166
Query: 164 EASPDTIRR----AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219
+ + R + Q+E +++++ C+ I +V YC LG
Sbjct: 167 NFNCRQLERILNKPGLKYKPVCNQVE--CHLYLNQSKMLDYCKSKDIILVSYCTLGSSRD 224
Query: 220 GGKAVVESVPL 230
+S L
Sbjct: 225 KTWVDQKSPVL 235
|
| >4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} Length = 288 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 2e-20
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKY 65
+ V L + G+++ + G G + SP + E + +K A G DTA Y
Sbjct: 7 GVDKAMVTL-SNGVKMPQFGLGV------WQSP-AGEVTENAVKWALCAGYRHIDTAAIY 58
Query: 66 GPYTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLD 123
NE +G L+ +PRE++ + TK E G+ E + E S ++L
Sbjct: 59 K---NEESVGAGLRASGVPREDVFITTKLWNTEQGY---------ESTLAAFEESRQKLG 106
Query: 124 VEYIDLYYQH----RVDTSVPIEETIG---EMKKLVEEGKIKYIGLSEASPDTIRRAHAV 176
V+YIDLY H + S ++ + ++L +E K++ IG+S + A+
Sbjct: 107 VDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAM 166
Query: 177 HPIT-AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+T V Q+E + + ++ C I + + PLG+G
Sbjct: 167 CTVTPMVNQVELHPL--NNQADLRAFCDAKQIKVEAWSPLGQG 207
|
| >3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} PDB: 3qkz_A* Length = 316 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 3e-20
Identities = 52/252 (20%), Positives = 93/252 (36%), Gaps = 52/252 (20%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
VKL T ++ +G G + SP +K A G FD A Y
Sbjct: 2 TTFVKLRT-KAKMPLVGLGT------WKSP--PGQVKEAVKAAIDAGYRHFDCAYVYQ-- 50
Query: 69 TNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRL 122
NE +G+A++E + RE++ + +K L T ++ + +L L
Sbjct: 51 -NESEVGEAIQEKIKEKAVRREDLFIVSK-----LWST----FFEKSLMKEAFQKTLSDL 100
Query: 123 DVEYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163
++Y+DLY H + + + M++LV++G +K +G+S
Sbjct: 101 KLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVKALGVS 160
Query: 164 EASPDTIRR--AHAVHPIT-AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219
+ I R Q+E + +++ C GI ++ Y PLG
Sbjct: 161 NFNHFQIERLLNKPGLKHKPVTNQVE--CHPYLTQEKLIQYCHSKGIAVIAYSPLGSPDR 218
Query: 220 GGKAVVESVPLD 231
+ V L+
Sbjct: 219 PYAKPEDPVVLE 230
|
| >3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana} Length = 335 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 3e-20
Identities = 54/236 (22%), Positives = 84/236 (35%), Gaps = 53/236 (22%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+ KL T G + +G G + + + A G D A YG
Sbjct: 24 AITFFKLNT-GAKFPSVGLGT------WQAS--PGLVGDAVAAAVKIGYRHIDCAQIYG- 73
Query: 68 YTNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121
NE +G LK+ + RE++ + +K L T P+ V +L+
Sbjct: 74 --NEKEIGAVLKKLFEDRVVKREDLFITSK-----LWCT----DHDPQDVPEALNRTLKD 122
Query: 122 LDVEYIDLYYQH--------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 167
L +EY+DLY H V I T M+ L + GK + IG+S S
Sbjct: 123 LQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFST 182
Query: 168 DTIRR--AHAVHPITAVQLE----WSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+ A P Q+E W + ++ C+ G+ + Y PLG
Sbjct: 183 KKLADLLELARVPPAVNQVECHPSWR------QTKLQEFCKSKGVHLSAYSPLGSP 232
|
| >1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1 Length = 298 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 3e-20
Identities = 61/226 (26%), Positives = 95/226 (42%), Gaps = 39/226 (17%)
Query: 3 EDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTA 62
+QVP+V L G+E+ LGYG + P E + A G DTA
Sbjct: 9 HHHHMQVPKVTLNN-GVEMPILGYGV------FQIP--PEKTEECVYEAIKVGYRLIDTA 59
Query: 63 DKYGPYTNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116
Y NE +G+A+K + RE + V TK ++G+ E + E
Sbjct: 60 ASYM---NEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVGY---------ESTKKAFE 107
Query: 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIG---EMKKLVEEGKIKYIGLSEASPDTIRRA 173
SL++L +EYIDLY H+ P + M+++ ++G ++ IG+S PD +
Sbjct: 108 KSLKKLQLEYIDLYLIHQ-----PFGDVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDL 162
Query: 174 HAVHPIT-AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
H I AV Q+E + + E + R I + P G
Sbjct: 163 MVHHEIVPAVNQIEIHPFYQ--RQEEIEFMRNYNIQPEAWGPFAEG 206
|
| >3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar} Length = 283 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 4e-20
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
VP VKL G + +LGYG + +S ++ +S + A G DTA YG
Sbjct: 25 TVPTVKL-NDGNHIPQLGYGV------W--QISNDEAVSAVSEALKAGYRHIDTATIYG- 74
Query: 68 YTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVE 125
NE +GKA+ + R +I + TK + G+ E + SL++L +
Sbjct: 75 --NEEGVGKAINGSGIARADIFLTTKLWNSDQGY---------ESTLKAFDTSLKKLGTD 123
Query: 126 YIDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT- 180
Y+DLY H D + ET KL EEG++K IG+S + R +T
Sbjct: 124 YVDLYLIHWPMPSKDLFM---ETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTP 180
Query: 181 AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+ Q+E L + ++E+ + I + PLG+G
Sbjct: 181 VLNQIE--LHPQFQQDELRLFHGKHDIATEAWSPLGQG 216
|
| >3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia} Length = 334 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 5e-20
Identities = 56/250 (22%), Positives = 95/250 (38%), Gaps = 68/250 (27%)
Query: 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG 66
L+ G+ +LG+G + +P E + ++ A G D A Y
Sbjct: 12 LEAQTQGPGS-MQYPPRLGFGT------WQAP--PEAVQTAVETALMTGYRHIDCAYVYQ 62
Query: 67 PYTNEILLGKALKE--------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118
NE +G+A + + RE++ + +K L PE VR C+ +
Sbjct: 63 ---NEEAIGRAFGKIFKDASSGIKREDVWITSK-----LWNY----NHRPELVREQCKKT 110
Query: 119 LRRLDVEYIDLYYQH---------------------RVDTSVPIEETIGEMKKLVEEGKI 157
+ L V+Y+DL+ H + VP+ +T M++LVEEG +
Sbjct: 111 MSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGLV 170
Query: 158 KYIGLSEASPDTIRR--AHAVHPITAVQLEWSLWARDIE-------NEIVPLCRELGIGI 208
K+IG+S + + +A Q IE + V C + GIG+
Sbjct: 171 KHIGVSNYTVPLLADLLNYAKIKPLVNQ---------IEIHPWHPNDATVKFCLDNGIGV 221
Query: 209 VPYCPLGRGF 218
Y P+G +
Sbjct: 222 TAYSPMGGSY 231
|
| >1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei} Length = 281 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 1e-19
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 35/217 (16%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
+KL + G+ + LG+G + E + A G DTA Y
Sbjct: 9 TQSLKL-SNGVMMPVLGFGM------WKLQDGNE-AETATMWAIKSGYRHIDTAAIYK-- 58
Query: 69 TNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEY 126
NE G+A+ +PRE + V TK + G+ E S E S+++L +EY
Sbjct: 59 -NEESAGRAIASCGVPREELFVTTKLWNSDQGY---------ESTLSAFEKSIKKLGLEY 108
Query: 127 IDLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT-A 181
+DLY H P ++ + +KL + K++ IG+S I +
Sbjct: 109 VDLYLIHW-----PGKDKFIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPM 163
Query: 182 V-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
V Q+E + + C+ I + + PLG+G
Sbjct: 164 VNQIELHPL--LNQKALCEYCKSKNIAVTAWSPLGQG 198
|
| >1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A* Length = 278 | Back alignment and structure |
|---|
Score = 83.7 bits (208), Expect = 1e-19
Identities = 51/218 (23%), Positives = 83/218 (38%), Gaps = 36/218 (16%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
VP + L G + +LGYG + + D ++ A G DTA YG
Sbjct: 3 VPSIVL-NDGNSIPQLGYGV------F--KVPPADTQRAVEEALEVGYRHIDTAAIYG-- 51
Query: 69 TNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEY 126
NE +G A+ + R+++ + TK + + SL +L ++
Sbjct: 52 -NEEGVGAAIAASGIARDDLFITTKLWNDRHDG---------DEPAAAIAESLAKLALDQ 101
Query: 127 IDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT-A 181
+DLY H D V +M +L G + IG+S + R A + A
Sbjct: 102 VDLYLVHWPTPAADNYV---HAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPA 158
Query: 182 V-QLEWS-LWARDIENEIVPLCRELGIGIVPYCPLGRG 217
V Q+E + + EI + I + PLG+G
Sbjct: 159 VNQIELHPAYQQR---EITDWAAAHDVKIESWGPLGQG 193
|
| >3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana} Length = 331 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 6e-19
Identities = 50/195 (25%), Positives = 73/195 (37%), Gaps = 44/195 (22%)
Query: 48 IKHAFSKGITFFDTADKYGPYTNEILLGKALKEL------PRENIQVATKFGFVELGFTS 101
I+ A G D A YG NE +G LK+L RE + + +K L
Sbjct: 51 IEQAIKIGYRHIDCASIYG---NEKEIGGVLKKLIGDGFVKREELFITSK-----LWSND 102
Query: 102 VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQH--------------RVDTSVPIEETIGE 147
PE V E +L+ L ++Y+DLY H + T I T
Sbjct: 103 H----LPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWKA 158
Query: 148 MKKLVEEGKIKYIGLSEASPDTIRR--AHAVHPITAVQLE----WSLWARDIENEIVPLC 201
M+ L + GK + IG+S S + A Q+E W + + LC
Sbjct: 159 MEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQ------QQGLHELC 212
Query: 202 RELGIGIVPYCPLGR 216
+ G+ + Y PLG
Sbjct: 213 KSKGVHLSGYSPLGS 227
|
| >4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A* Length = 290 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 6e-19
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 35/218 (16%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
V L + + +LG G + + + + ++ A G DTA Y
Sbjct: 12 NYNCVTL-HNSVRMPQLGLGV------WRAQ-DGAETANAVRWAIEAGYRHIDTAYIYS- 62
Query: 68 YTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVE 125
NE +G+ ++E +PRE + V TK + G+ E + E S L +E
Sbjct: 63 --NERGVGQGIRESGVPREEVWVTTKVWNSDQGY---------EKTLAAFERSRELLGLE 111
Query: 126 YIDLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT- 180
YIDLY H P ++ + ++KL EE K++ IG+S P + I
Sbjct: 112 YIDLYLIHW-----PGKKKFVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRP 166
Query: 181 AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
V Q+E + + C++ I I + PLG G
Sbjct: 167 MVNQVELHPL--FQQRTLREFCKQHNIAITAWSPLGSG 202
|
| >3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A* Length = 276 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 9e-19
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 35/216 (16%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
VKL G+E+ G G + E +K A G DTA Y
Sbjct: 7 DTVKL-HNGVEMPWFGLGV------FKVENGNE-ATESVKAAIKNGYRSIDTAAIYK--- 55
Query: 70 NEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
NE +G +KE + RE + + +K + G+ E + E SL RL ++Y+
Sbjct: 56 NEEGVGIGIKESGVAREELFITSKVWNEDQGY---------ETTLAAFEKSLERLQLDYL 106
Query: 128 DLYYQHRVDTSVPIEETIGE----MKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT-AV 182
DLY H P ++ + ++KL ++GKI+ IG+S + I V
Sbjct: 107 DLYLIHW-----PGKDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMV 161
Query: 183 -QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
Q+E+ + E+ C+ GI + + PL +G
Sbjct: 162 NQVEFHPR--LTQKELRDYCKGQGIQLEAWSPLMQG 195
|
| >1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1 Length = 296 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 6e-18
Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 36/218 (16%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
+KL G + +LG G + S E+ I+ I+ A G DTA Y
Sbjct: 24 NPTVIKL-QDGNVMPQLGLGV------W--QASNEEVITAIQKALEVGYRSIDTAAAYK- 73
Query: 68 YTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVE 125
NE +GKALK + RE + + TK + + R SL++L ++
Sbjct: 74 --NEEGVGKALKNASVNREELFITTK----------LWNDDH-KRPREALLDSLKKLQLD 120
Query: 126 YIDLYYQH----RVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT- 180
YIDLY H +D V E M +L +EG IK IG+ ++R +T
Sbjct: 121 YIDLYLMHWPVPAIDHYV---EAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTP 177
Query: 181 AV-QLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+ Q+E L + ++ I + PL +G
Sbjct: 178 VINQIE--LHPLMQQRQLHAWNATHKIQTESWSPLAQG 213
|
| >3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} Length = 324 | Back alignment and structure |
|---|
Score = 70.4 bits (172), Expect = 2e-14
Identities = 51/252 (20%), Positives = 82/252 (32%), Gaps = 51/252 (20%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGI-SIIKHAFSKGITFFDTADKYGP 67
V L G + LG+G Y A G DTA Y
Sbjct: 6 QHCVXLND-GHLIPALGFGT------YXPXEVPXSXSLEAACLALDVGYRHVDTAYAYQ- 57
Query: 68 YTNEILLGKALKE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121
E +G+A++ + RE++ V TK PE V E SL
Sbjct: 58 --VEEEIGQAIQSXIXAGVVXREDLFVTTKLWCTCFR---------PELVXPALEXSLXX 106
Query: 122 LDVEYIDLYYQH-------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGL 162
L ++Y+DLY H + +V +T +++ + G + IG+
Sbjct: 107 LQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGLVXSIGV 166
Query: 163 SEASPDTIRR----AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218
S + + R + Q+E L+ + ++ C I +V Y LG
Sbjct: 167 SNFNHRQLERILNXPGLXYXPVCNQVECHLYLN--QRXLLDYCESXDIVLVAYGALGTQR 224
Query: 219 FGGKAVVESVPL 230
+ S L
Sbjct: 225 YXEWVDQNSPVL 236
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 235 | |||
| 3n2t_A | 348 | Putative oxidoreductase; aldo/keto reductase super | 100.0 | |
| 3v0s_A | 337 | Perakine reductase; AKR superfamily, oxidoreductas | 100.0 | |
| 1pyf_A | 312 | IOLS protein; beta-alpha barrel, aldo-keto reducta | 100.0 | |
| 1pz1_A | 333 | GSP69, general stress protein 69; beta-alpha barre | 100.0 | |
| 3n6q_A | 346 | YGHZ aldo-keto reductase; TIM barrel, oxidoreducta | 100.0 | |
| 3erp_A | 353 | Putative oxidoreductase; funded by the national in | 100.0 | |
| 1ynp_A | 317 | Oxidoreductase, AKR11C1; aldo-keto reductase, NADP | 100.0 | |
| 3eau_A | 327 | Voltage-gated potassium channel subunit beta-2; kv | 100.0 | |
| 3lut_A | 367 | Voltage-gated potassium channel subunit beta-2; vo | 100.0 | |
| 1lqa_A | 346 | TAS protein; TIM barrel, structure 2 function proj | 100.0 | |
| 1ur3_M | 319 | Hypothetical oxidoreductase YDHF; NADP binding, al | 100.0 | |
| 4exb_A | 292 | Putative uncharacterized protein; aldo-keto reduct | 100.0 | |
| 3f7j_A | 276 | YVGN protein; aldo-keto reductase, oxidoreductase; | 100.0 | |
| 3o0k_A | 283 | Aldo/keto reductase; ssgcid, ALS collaborative cry | 100.0 | |
| 3ln3_A | 324 | Dihydrodiol dehydrogenase; putative reductase, str | 100.0 | |
| 3up8_A | 298 | Putative 2,5-diketo-D-gluconic acid reductase B; n | 100.0 | |
| 1vbj_A | 281 | Prostaglandin F synthase; TIM barrel, oxidoreducta | 100.0 | |
| 1afs_A | 323 | 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; | 100.0 | |
| 3b3e_A | 310 | YVGN protein; aldo-keto reductase, oxidoreductase; | 100.0 | |
| 2wzm_A | 283 | Aldo-keto reductase; oxidoreductase; HET: NA7; 1.6 | 100.0 | |
| 1gve_A | 327 | Aflatoxin B1 aldehyde reductase member 3; oxidored | 100.0 | |
| 2bp1_A | 360 | Aflatoxin B1 aldehyde reductase member 2; oxidored | 100.0 | |
| 1hw6_A | 278 | 2,5-diketo-D-gluconic acid reductase; aldo-keto re | 100.0 | |
| 1qwk_A | 317 | Aldose reductase, aldo-keto reductase family 1 mem | 100.0 | |
| 4gie_A | 290 | Prostaglandin F synthase; structural genomics, nia | 100.0 | |
| 3buv_A | 326 | 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reduc | 100.0 | |
| 1zgd_A | 312 | Chalcone reductase; polyketide, deoxychalcone, iso | 100.0 | |
| 4f40_A | 288 | Prostaglandin F2-alpha synthase/D-arabinose dehyd; | 100.0 | |
| 1s1p_A | 331 | Aldo-keto reductase family 1 member C3; TIM-barrel | 100.0 | |
| 1mi3_A | 322 | Xylose reductase, XR; aldo-keto reductase, beta-al | 100.0 | |
| 1mzr_A | 296 | 2,5-diketo-D-gluconate reductase A; alpha/beta-bar | 100.0 | |
| 3krb_A | 334 | Aldose reductase; ssgcid, SBRI, emerald biostructu | 100.0 | |
| 3h7u_A | 335 | Aldo-keto reductase; stress response, NADP, drough | 100.0 | |
| 3o3r_A | 316 | Aldo-keto reductase family 1, member B7; aldose re | 100.0 | |
| 1us0_A | 316 | Aldose reductase; oxidoreductase, NADP, IDD594; HE | 100.0 | |
| 1vp5_A | 298 | 2,5-diketo-D-gluconic acid reductase; TM1009, stru | 100.0 | |
| 3b3d_A | 314 | YTBE protein, putative morphine dehydrogenase; ald | 100.0 | |
| 3h7r_A | 331 | Aldo-keto reductase; stress response, NADP, drough | 100.0 | |
| 2bgs_A | 344 | Aldose reductase; holoenzyme, aldo/keto reductase, | 100.0 | |
| 4gac_A | 324 | Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldhe | 100.0 | |
| 3cf4_A | 807 | Acetyl-COA decarboxylase/synthase alpha subunit; m | 97.88 | |
| 2zad_A | 345 | Muconate cycloisomerase; muconate lactonizing enzy | 94.63 | |
| 1mdl_A | 359 | Mandelate racemase; isomerase, mandelate pathway, | 94.59 | |
| 1nu5_A | 370 | Chloromuconate cycloisomerase; enzyme, dehalogenat | 94.52 | |
| 2pgw_A | 384 | Muconate cycloisomerase; enolase superfamily, octa | 94.35 | |
| 3i4k_A | 383 | Muconate lactonizing enzyme; structural genomics, | 94.17 | |
| 2nql_A | 388 | AGR_PAT_674P, isomerase/lactonizing enzyme; enolas | 94.12 | |
| 2o56_A | 407 | Putative mandelate racemase; dehydratase, structur | 94.12 | |
| 2rdx_A | 379 | Mandelate racemase/muconate lactonizing enzyme, P; | 94.1 | |
| 2ovl_A | 371 | Putative racemase; structural genomics, PSI-2, pro | 94.02 | |
| 2og9_A | 393 | Mandelate racemase/muconate lactonizing enzyme; NY | 93.91 | |
| 3gd6_A | 391 | Muconate cycloisomerase; structural genomics, NYSG | 93.81 | |
| 1tkk_A | 366 | Similar to chloromuconate cycloisomerase; epimeras | 93.76 | |
| 2qde_A | 397 | Mandelate racemase/muconate lactonizing enzyme FA | 93.48 | |
| 3ik4_A | 365 | Mandelate racemase/muconate lactonizing protein; s | 93.44 | |
| 1r0m_A | 375 | N-acylamino acid racemase; isomerase; 1.30A {Deino | 93.43 | |
| 2qgy_A | 391 | Enolase from the environmental genome shotgun sequ | 93.29 | |
| 2pp0_A | 398 | L-talarate/galactarate dehydratase; enolase superf | 93.21 | |
| 3jva_A | 354 | Dipeptide epimerase; enolase superfamily, isomeras | 92.94 | |
| 3dg3_A | 367 | Muconate cycloisomerase; muconate lactonizing enzy | 92.92 | |
| 2ox4_A | 403 | Putative mandelate racemase; enolase, dehydratase, | 92.75 | |
| 2gl5_A | 410 | Putative dehydratase protein; structural genomics, | 92.68 | |
| 2ps2_A | 371 | Putative mandelate racemase/muconate lactonizing e | 92.57 | |
| 3eez_A | 378 | Putative mandelate racemase/muconate lactonizing e | 92.53 | |
| 3bjs_A | 428 | Mandelate racemase/muconate lactonizing enzyme; en | 92.49 | |
| 3q45_A | 368 | Mandelate racemase/muconate lactonizing enzyme FA | 92.45 | |
| 2zc8_A | 369 | N-acylamino acid racemase; octamer, TIM beta/alpha | 92.37 | |
| 2qdd_A | 378 | Mandelate racemase/muconate lactonizing enzyme; en | 92.33 | |
| 2p8b_A | 369 | Mandelate racemase/muconate lactonizing enzyme fam | 92.27 | |
| 2poz_A | 392 | Putative dehydratase; octamer, structural genomics | 92.11 | |
| 3i6e_A | 385 | Muconate cycloisomerase I; structural genomics, NY | 91.88 | |
| 3s5s_A | 389 | Mandelate racemase/muconate lactonizing enzyme FA | 91.79 | |
| 1rvk_A | 382 | Isomerase/lactonizing enzyme; enolase superfamily, | 91.59 | |
| 2qq6_A | 410 | Mandelate racemase/muconate lactonizing enzyme- li | 91.57 | |
| 3fv9_G | 386 | Mandelate racemase/muconate lactonizing enzyme; st | 91.38 | |
| 1sjd_A | 368 | N-acylamino acid racemase; lyase, isomerase; HET: | 90.85 | |
| 3rr1_A | 405 | GALD, putative D-galactonate dehydratase; enolase, | 90.81 | |
| 2hxt_A | 441 | L-fuconate dehydratase; enolase superfamily, D-ery | 90.73 | |
| 1tzz_A | 392 | Hypothetical protein L1841; structural genomics, m | 90.51 | |
| 4dwd_A | 393 | Mandelate racemase/muconate lactonizing enzyme, C | 90.51 | |
| 3mwc_A | 400 | Mandelate racemase/muconate lactonizing protein; e | 90.43 | |
| 3ozy_A | 389 | Putative mandelate racemase; beta-alpha barrel, en | 90.42 | |
| 3tj4_A | 372 | Mandelate racemase; enolase, dehydratase, enzyme f | 90.41 | |
| 2oz8_A | 389 | MLL7089 protein; structural genomics, unknown func | 90.18 | |
| 3r0u_A | 379 | Enzyme of enolase superfamily; structural genomics | 89.83 | |
| 2hzg_A | 401 | Mandelate racemase/muconate lactonizing enzyme/EN | 89.64 | |
| 3toy_A | 383 | Mandelate racemase/muconate lactonizing enzyme FA | 89.46 | |
| 3u9i_A | 393 | Mandelate racemase/muconate lactonizing enzyme, C | 89.23 | |
| 3stp_A | 412 | Galactonate dehydratase, putative; PSI biology, st | 89.01 | |
| 3my9_A | 377 | Muconate cycloisomerase; structural genomics, PSI- | 89.0 | |
| 2gdq_A | 382 | YITF; mandelate racemase/muconate lactonizing enzy | 89.0 | |
| 4dye_A | 398 | Isomerase; enolase family protein, EFI, enzym func | 88.82 | |
| 4e8g_A | 391 | Enolase, mandelate racemase/muconate lactonizing e | 88.12 | |
| 3ddm_A | 392 | Putative mandelate racemase/muconate lactonizing e | 88.01 | |
| 1wuf_A | 393 | Hypothetical protein LIN2664; structural genomics, | 87.81 | |
| 3ro6_B | 356 | Putative chloromuconate cycloisomerase; TIM barrel | 87.59 | |
| 3qld_A | 388 | Mandelate racemase/muconate lactonizing protein; s | 87.05 | |
| 3va8_A | 445 | Probable dehydratase; enolase, magnesium binding s | 86.9 | |
| 3rcy_A | 433 | Mandelate racemase/muconate lactonizing enzyme-LI | 86.71 | |
| 3sjn_A | 374 | Mandelate racemase/muconate lactonizing protein; e | 86.27 | |
| 3t6c_A | 440 | RSPA, putative MAND family dehydratase; enolase, m | 86.21 | |
| 3fcp_A | 381 | L-Ala-D/L-Glu epimerase, A muconate lactonizing en | 85.96 | |
| 3r4e_A | 418 | Mandelate racemase/muconate lactonizing enzyme; en | 85.83 | |
| 4e5t_A | 404 | Mandelate racemase / muconate lactonizing enzyme, | 85.81 | |
| 3p3b_A | 392 | Mandelate racemase/muconate lactonizing protein; e | 85.59 | |
| 3sbf_A | 401 | Mandelate racemase / muconate lactonizing enzyme; | 85.46 | |
| 3vdg_A | 445 | Probable glucarate dehydratase; enolase, magnesium | 84.93 | |
| 2chr_A | 370 | Chloromuconate cycloisomerase; 3.00A {Cupriavidus | 84.79 | |
| 1kko_A | 413 | 3-methylaspartate ammonia-lyase; enolase superfami | 84.45 | |
| 2akz_A | 439 | Gamma enolase, neural; fluoride inhibition, negati | 84.21 | |
| 3qtp_A | 441 | Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Ent | 83.74 | |
| 4e4u_A | 412 | Mandalate racemase/muconate lactonizing enzyme; ma | 83.66 | |
| 1nsj_A | 205 | PRAI, phosphoribosyl anthranilate isomerase; therm | 83.6 | |
| 4a35_A | 441 | Mitochondrial enolase superfamily member 1; isomer | 83.35 | |
| 3vc5_A | 441 | Mandelate racemase/muconate lactonizing protein; d | 83.21 | |
| 3v3w_A | 424 | Starvation sensing protein RSPA; enolase, enzyme f | 83.17 | |
| 3dgb_A | 382 | Muconate cycloisomerase; muconate lactonizing enzy | 83.14 | |
| 1chr_A | 370 | Chloromuconate cycloisomerase; 3.00A {Ralstonia eu | 81.74 | |
| 3ugv_A | 390 | Enolase; enzyme function initiative, EFI, lyase; 2 | 81.55 | |
| 1ydn_A | 295 | Hydroxymethylglutaryl-COA lyase; TIM-barrel protei | 81.05 | |
| 3qy7_A | 262 | Tyrosine-protein phosphatase YWQE; TIM barrel, pol | 80.85 | |
| 3go2_A | 409 | Putative L-alanine-DL-glutamate epimerase; structu | 80.58 | |
| 4hnl_A | 421 | Mandelate racemase/muconate lactonizing enzyme; de | 80.23 |
| >3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-57 Score=392.36 Aligned_cols=218 Identities=31% Similarity=0.508 Sum_probs=197.7
Q ss_pred cccCCCCceecCCCCcccCcceeccccCCCC-CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCC
Q 026625 4 DKKLQVPRVKLGTQGLEVSKLGYGCMSLSGC-YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP 82 (235)
Q Consensus 4 ~~~~~m~~~~lg~~g~~vs~lg~G~~~~~~~-~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~ 82 (235)
.+| +|+|++||++|++||+||||||++++. |+. .+++++.++|+.|+++|||+||||+.||.|.||+.+|++|+. +
T Consensus 15 ~~m-~M~~~~lg~tg~~vs~lglGt~~~g~~~~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~ 91 (348)
T 3n2t_A 15 SHM-ASDTIRIPGIDTPLSRVALGTWAIGGWMWGG-PDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE-K 91 (348)
T ss_dssp --C-TTSEECCTTCSSCEESEEEECTTSSCSSSCS-TTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH-S
T ss_pred CCC-CceeeecCCCCCccCCEeEeCccccCCCCCC-CCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh-C
Confidence 456 489999999999999999999999863 554 488999999999999999999999999999999999999996 9
Q ss_pred CCCEEEEeccccccC-CCc---ccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc
Q 026625 83 RENIQVATKFGFVEL-GFT---SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK 158 (235)
Q Consensus 83 R~~~~I~tK~~~~~~-~~~---~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 158 (235)
|++++|+||++..+. ..+ ....+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++||||
T Consensus 92 R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir 171 (348)
T 3n2t_A 92 PNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIR 171 (348)
T ss_dssp CCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEE
T ss_pred CCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcce
Confidence 999999999975431 111 2234578999999999999999999999999999999889999999999999999999
Q ss_pred EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCCCC
Q 026625 159 YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (235)
Q Consensus 159 ~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~ 224 (235)
+||||||++++++++++..+++++|++||++++..+.+++++|+++||++++||||++|+|+|++.
T Consensus 172 ~iGvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~ 237 (348)
T 3n2t_A 172 ALGVSNFSPEQMDIFREVAPLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMN 237 (348)
T ss_dssp EEEEESCCHHHHHHHHHHSCCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBCTTGGGGGGTCCC
T ss_pred EEecCCCCHHHHHHHHHhCCccEEEeeecCccCchHHHHHHHHHHcCCeEEEeecccCccccCCcc
Confidence 999999999999999998899999999999999877899999999999999999999999999954
|
| >3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-58 Score=397.03 Aligned_cols=214 Identities=74% Similarity=1.251 Sum_probs=192.9
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCC-CcHHHHHHHHHhcCCCCCEE
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQ 87 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~sE~~lG~al~~~~R~~~~ 87 (235)
|+|++||++|++||+||||||++++.|+...+++++.++|+.|+++|||+||||+.||. |.||+.+|++|++.+|++++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~ 80 (337)
T 3v0s_A 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQ 80 (337)
T ss_dssp CCEEECSSSSCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCE
T ss_pred CCeeecCCCCceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceE
Confidence 78999999999999999999999987876668899999999999999999999999997 68999999999976899999
Q ss_pred EEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCCCH
Q 026625 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 167 (235)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~ 167 (235)
|+||++......+....+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++||||+||||||++
T Consensus 81 i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~ 160 (337)
T 3v0s_A 81 VGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASP 160 (337)
T ss_dssp EEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred EEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeEEeccCCCH
Confidence 99999876422122334578999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCC
Q 026625 168 DTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (235)
Q Consensus 168 ~~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 222 (235)
++++++++..+++++|++||++++..+.+++++|+++||++++||||++|+|+|+
T Consensus 161 ~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~g~ 215 (337)
T 3v0s_A 161 DTIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGK 215 (337)
T ss_dssp HHHHHHHHHSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHHHHHHHH
T ss_pred HHHHHHhccCCceEEEeeccccccchhHHHHHHHHHcCceEEEeccccCcccCCC
Confidence 9999999999999999999999998778999999999999999999999999987
|
| >1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-57 Score=385.52 Aligned_cols=221 Identities=31% Similarity=0.589 Sum_probs=195.9
Q ss_pred CCceecCCCCcccCcceeccccCCCC--CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCE
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGC--YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENI 86 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~--~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~ 86 (235)
|+|++||++|++||+||||||++++. |+. .+++++.++|+.|++.|||+||||+.||+|.||+.+|++|+..+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~ 79 (312)
T 1pyf_A 1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLYPN-LNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDV 79 (312)
T ss_dssp -CCEECTTSCCEECSBCEECTTSSCTTTCSS-CCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGC
T ss_pred CCeeecCCCCCcccCEeEeccccCCCCCCCC-CCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeE
Confidence 68999999999999999999999864 443 478999999999999999999999999999999999999996589999
Q ss_pred EEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCCC
Q 026625 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 166 (235)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~ 166 (235)
+|+||++.... .+....+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++||||+||||||+
T Consensus 80 ~i~TK~g~~~~-~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (312)
T 1pyf_A 80 VIATKAAHRKQ-GNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFS 158 (312)
T ss_dssp EEEEEECEEEE-TTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCC
T ss_pred EEEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHCCCcCEEEecCCC
Confidence 99999762210 11112357899999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCCCC-CCCCCCC
Q 026625 167 PDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV-VESVPLD 231 (235)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~-~~~~~~~ 231 (235)
+++++++++..+|+++|++||++++..+.+++++|+++||++++||||++|+|++++. +..+|++
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~~~~~~~~~~~~~ 224 (312)
T 1pyf_A 159 LEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEG 224 (312)
T ss_dssp HHHHHHHTTTSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCCTTCCCCTT
T ss_pred HHHHHHHHhhCCceEEeccCCccccchHHHHHHHHHHcCCeEEEecccccccccCCCCCCCCCCCc
Confidence 9999999998899999999999999877789999999999999999999999999843 3334433
|
| >1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-55 Score=379.09 Aligned_cols=214 Identities=33% Similarity=0.555 Sum_probs=194.4
Q ss_pred CCceecCCCCcccCcceeccccCCCC-CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCE
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGC-YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENI 86 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~-~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~ 86 (235)
|++++||++|++||+||||||++++. |+. .+++++.++|+.|+++|||+||||+.||.|.||+.+|++|+. .+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~ 79 (333)
T 1pz1_A 1 MEYTSIADTGIEASRIGLGTWAIGGTMWGG-TDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQV 79 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTTC-CCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGC
T ss_pred CCceecCCCCCcccCEeEechhhcCCcCCC-CCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeE
Confidence 68999999999999999999999864 663 488999999999999999999999999999999999999986 379999
Q ss_pred EEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCCC
Q 026625 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 166 (235)
Q Consensus 87 ~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~ 166 (235)
+|+||++..... +....+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++||||+||||||+
T Consensus 80 ~i~TK~~~~~~~-~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (333)
T 1pz1_A 80 ILATKTALDWKN-NQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFS 158 (333)
T ss_dssp EEEEEECEEESS-SCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCC
T ss_pred EEEEeeCccCCC-CCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHHCCcCCEEEecCCC
Confidence 999999732211 1111246899999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCCCC
Q 026625 167 PDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (235)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~ 224 (235)
.++++++++..+++++|++||++++..+.+++++|+++||++++||||++|+|++++.
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~ 216 (333)
T 1pz1_A 159 IEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMT 216 (333)
T ss_dssp HHHHHHHHTTSCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCC
T ss_pred HHHHHHHHhcCCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccCCccCCCcc
Confidence 9999999999999999999999999877899999999999999999999999999854
|
| >3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-55 Score=378.71 Aligned_cols=220 Identities=29% Similarity=0.542 Sum_probs=192.6
Q ss_pred Cccccc-CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCC--CcHHHHHHHH
Q 026625 1 MAEDKK-LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP--YTNEILLGKA 77 (235)
Q Consensus 1 ~~~~~~-~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g~sE~~lG~a 77 (235)
|++..+ ..|+||+||+||++||+||||||+. +|...+++++.++|+.|++.|||+||||+.||+ |.||+.+|++
T Consensus 4 ~~~~~~~~~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~a 80 (346)
T 3n6q_A 4 LANPERYGQMQYRYCGKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRL 80 (346)
T ss_dssp CCCTTTTSSCCEEECTTSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHH
T ss_pred ccCCCcccCceeEecCCCCCeecCeeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHH
Confidence 444444 4699999999999999999999863 344457899999999999999999999999998 8999999999
Q ss_pred Hhc--CC-CCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc
Q 026625 78 LKE--LP-RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE 154 (235)
Q Consensus 78 l~~--~~-R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~ 154 (235)
|++ .+ |++++|+||++..... +......+++.+++++++||++||+||||+|++|+|+...+++++|++|++|+++
T Consensus 81 l~~~~~~~R~~~~I~TK~g~~~~~-~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~ 159 (346)
T 3n6q_A 81 LREDFAAYRDELIISTKAGYDMWP-GPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQS 159 (346)
T ss_dssp HHHHCTTTGGGCEEEEEECSCCSS-STTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHT
T ss_pred HHhhcccccccEEEEEEecccCCC-CCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHc
Confidence 997 34 9999999998754321 1111234899999999999999999999999999999988999999999999999
Q ss_pred CCccEEEeCCCCHHHHHHHHhc-----CCeeEEeeccCcccccccc-hHHHHHHHhCCeEEecccCccccCCCCCC
Q 026625 155 GKIKYIGLSEASPDTIRRAHAV-----HPITAVQLEWSLWARDIEN-EIVPLCRELGIGIVPYCPLGRGFFGGKAV 224 (235)
Q Consensus 155 G~ir~iGvSn~~~~~l~~~~~~-----~~~~~~q~~~n~~~~~~~~-~l~~~~~~~gi~v~a~spl~~G~L~~~~~ 224 (235)
||||+||||||++++++++.+. .+++++|++||++++..+. +++++|+++||++++||||++|+|++++.
T Consensus 160 Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~ 235 (346)
T 3n6q_A 160 GKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL 235 (346)
T ss_dssp TSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGGGGGGTSCC
T ss_pred CCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccCeecCCCcc
Confidence 9999999999999999987653 5788999999999997665 89999999999999999999999999854
|
| >3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-55 Score=377.41 Aligned_cols=214 Identities=29% Similarity=0.552 Sum_probs=190.6
Q ss_pred CCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCC--CcHHHHHHHHHhc-C--C
Q 026625 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP--YTNEILLGKALKE-L--P 82 (235)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g~sE~~lG~al~~-~--~ 82 (235)
.|+||+||+||++||+||||||+. ||...+.+++.++|+.|++.|||+||||+.||+ |.||+.+|++|++ . .
T Consensus 33 ~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~ 109 (353)
T 3erp_A 33 TMEYRRCGRSGVKLPAISLGLWHN---FGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPW 109 (353)
T ss_dssp SCCEEECSSSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGG
T ss_pred cceeeecCCCCCccCCeeecChhh---cCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCC
Confidence 599999999999999999999942 333458899999999999999999999999998 9999999999986 3 3
Q ss_pred CCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe
Q 026625 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 162 (235)
Q Consensus 83 R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 162 (235)
|++++|+||++..... +......+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++||||+|||
T Consensus 110 R~~v~I~TK~g~~~~~-~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGv 188 (353)
T 3erp_A 110 RDELIISTKAGYTMWD-GPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGI 188 (353)
T ss_dssp GGGCEEEEEESSCCSS-STTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CCeEEEEeeeccCCCC-CcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEe
Confidence 9999999999754211 111122479999999999999999999999999999998899999999999999999999999
Q ss_pred CCCCHHHHHHHHhc-----CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCCCCC
Q 026625 163 SEASPDTIRRAHAV-----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (235)
Q Consensus 163 Sn~~~~~l~~~~~~-----~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~ 225 (235)
|||++++++++.+. .+++++|++||++++..+.+++++|+++||++++||||++|+|++++..
T Consensus 189 Sn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~G~Ltg~~~~ 256 (353)
T 3erp_A 189 SNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYLN 256 (353)
T ss_dssp ESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGGGTSSGGGTC
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEeccccccccCCCccC
Confidence 99999999988764 6899999999999998778899999999999999999999999998543
|
| >1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-55 Score=372.97 Aligned_cols=209 Identities=35% Similarity=0.566 Sum_probs=184.6
Q ss_pred cCCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCC
Q 026625 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPREN 85 (235)
Q Consensus 6 ~~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~ 85 (235)
+.+|+|++||++|++||+||||||+++. +.+++.++|+.|++.|||+||||+.||.|.||+.+|+||+. +|++
T Consensus 18 ~~~M~~r~lg~tg~~vs~lglGt~~~g~------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~~ 90 (317)
T 1ynp_A 18 GSHMKKRQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG-RRQD 90 (317)
T ss_dssp --CCCEEECTTSSCEEESBCBCSCCCCS------CHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT-CGGG
T ss_pred cCCcceeecCCCCCcccCEeEcCcccCC------CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc-CCCe
Confidence 3579999999999999999999999864 56889999999999999999999999999999999999995 8999
Q ss_pred EEEEeccccccCCCc-ccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCC
Q 026625 86 IQVATKFGFVELGFT-SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (235)
Q Consensus 86 ~~I~tK~~~~~~~~~-~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn 164 (235)
++|+||++......+ ....+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++||||+|||||
T Consensus 91 v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 170 (317)
T 1ynp_A 91 IILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISS 170 (317)
T ss_dssp CEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEEC
T ss_pred EEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCChHHHHHHHHHHHhCCceEEEEecC
Confidence 999999986432110 0123468999999999999999999999999999998888999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCC
Q 026625 165 ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (235)
Q Consensus 165 ~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 222 (235)
|+.++++++++..+++++|++||++++..+. ++++|+++||++++||||++|.|+++
T Consensus 171 ~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a~spL~~G~L~~~ 227 (317)
T 1ynp_A 171 IRPNVIKEYLKRSNIVSIMMQYSILDRRPEE-WFPLIQEHGVSVVVRGPVARGLLSRR 227 (317)
T ss_dssp CCHHHHHHHHHHSCCCEEEEECBTTBCGGGG-GHHHHHHTTCEEEEECTTGGGTTSSS
T ss_pred CCHHHHHHHHhcCCCEEEeccCCchhCCHHH-HHHHHHHcCCeEEEecCccCcccCCC
Confidence 9999999999988899999999999997655 99999999999999999999999987
|
| >3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-54 Score=373.75 Aligned_cols=214 Identities=29% Similarity=0.459 Sum_probs=190.8
Q ss_pred CCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCC
Q 026625 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (235)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~ 85 (235)
.|.||+||+||++||+||||||.. ||...+++++.++|+.|+++|||+||||+.||+|.||+.+|++|+. .+|++
T Consensus 2 ~m~yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~ 78 (327)
T 3eau_A 2 LQFYRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSS 78 (327)
T ss_dssp CCSEEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGG
T ss_pred cchhcccCCCCCcccceeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhcCCccCe
Confidence 478999999999999999999842 4445688999999999999999999999999999999999999997 58999
Q ss_pred EEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCC
Q 026625 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 165 (235)
Q Consensus 86 ~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~ 165 (235)
++|+||+++... .....+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++||||+||||||
T Consensus 79 v~I~TK~~~~~~--~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~ 156 (327)
T 3eau_A 79 LVITTKIFWGGK--AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRW 156 (327)
T ss_dssp CEEEEEESBCCS--SGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred EEEEEeecCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEeecCC
Confidence 999999864321 112345689999999999999999999999999999998999999999999999999999999999
Q ss_pred CHHHHHHHHhc------CCeeEEeeccCcccccc-cchHHHHHHHhCCeEEecccCccccCCCCCCCC
Q 026625 166 SPDTIRRAHAV------HPITAVQLEWSLWARDI-ENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVE 226 (235)
Q Consensus 166 ~~~~l~~~~~~------~~~~~~q~~~n~~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~ 226 (235)
++++++++... .+++++|++||++++.. +.+++++|+++||++++||||++|+|+|++...
T Consensus 157 ~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~ 224 (327)
T 3eau_A 157 SSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG 224 (327)
T ss_dssp CHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTTS
T ss_pred CHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccCceecCcccCC
Confidence 99999988753 57899999999999863 357999999999999999999999999996543
|
| >3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-54 Score=376.38 Aligned_cols=213 Identities=30% Similarity=0.484 Sum_probs=190.8
Q ss_pred CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCC
Q 026625 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (235)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~ 84 (235)
..| ||+||++|++||+||||||.. ||...+++++.++|+.|+++|||+||||+.||+|.||+.+|++|+. .+|+
T Consensus 36 ~~m-yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~ 111 (367)
T 3lut_A 36 LQF-YRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRS 111 (367)
T ss_dssp CCS-EEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGG
T ss_pred hhc-eeecCCCCCcccceeECCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCc
Confidence 458 999999999999999999842 4445688999999999999999999999999999999999999997 5799
Q ss_pred CEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCC
Q 026625 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (235)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn 164 (235)
+++|+||+++... .....+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++||||+|||||
T Consensus 112 ~v~I~TK~~~~~~--~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~iGvSn 189 (367)
T 3lut_A 112 SLVITTKIFWGGK--AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSR 189 (367)
T ss_dssp GCEEEEEESBCCS--SGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred eEEEEeccccCCC--CccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeEEEecC
Confidence 9999999865321 11234578999999999999999999999999999999889999999999999999999999999
Q ss_pred CCHHHHHHHHhc------CCeeEEeeccCcccccc-cchHHHHHHHhCCeEEecccCccccCCCCCCC
Q 026625 165 ASPDTIRRAHAV------HPITAVQLEWSLWARDI-ENEIVPLCRELGIGIVPYCPLGRGFFGGKAVV 225 (235)
Q Consensus 165 ~~~~~l~~~~~~------~~~~~~q~~~n~~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~ 225 (235)
|+.++++++... .+++++|++||++++.. +.+++++|+++||++++||||++|+|+|++..
T Consensus 190 ~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk~~~ 257 (367)
T 3lut_A 190 WSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 257 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTTTTT
T ss_pred CCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEecccccccccCCcCC
Confidence 999999988653 57899999999999875 45899999999999999999999999999654
|
| >1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-53 Score=366.79 Aligned_cols=218 Identities=27% Similarity=0.388 Sum_probs=187.5
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCC-------CCcHHHHHHHHHhc-
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG-------PYTNEILLGKALKE- 80 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-------~g~sE~~lG~al~~- 80 (235)
|+|++||++|++||+||||||+||. ..+++++.++|+.|+++|||+||||+.|| .|.||+.+|++|++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~ 76 (346)
T 1lqa_A 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH 76 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH
T ss_pred CCeeecCCCCCeecCeeEEccccCC----CCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc
Confidence 7899999999999999999998763 24788999999999999999999999996 68999999999987
Q ss_pred CCCCCEEEEeccccccCC---CcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCC---------------C--CCC
Q 026625 81 LPRENIQVATKFGFVELG---FTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVD---------------T--SVP 140 (235)
Q Consensus 81 ~~R~~~~I~tK~~~~~~~---~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~---------------~--~~~ 140 (235)
.+|++++|+||++..... ......+.+++.+++++++||++||+||||+|++|||. . ..+
T Consensus 77 ~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~ 156 (346)
T 1lqa_A 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_dssp CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC
T ss_pred CCCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCC
Confidence 589999999999753110 00001246899999999999999999999999999993 3 456
Q ss_pred HHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhc------CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccC
Q 026625 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV------HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~------~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl 214 (235)
++++|++|++|+++||||+||||||+.+++++++.. .+++++|++||++++..+.+++++|+++||++++||||
T Consensus 157 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL 236 (346)
T 1lqa_A 157 LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecch
Confidence 889999999999999999999999999888776542 46899999999999987788999999999999999999
Q ss_pred ccccCCCCCCCCCCCC
Q 026625 215 GRGFFGGKAVVESVPL 230 (235)
Q Consensus 215 ~~G~L~~~~~~~~~~~ 230 (235)
++|+|++++.....|+
T Consensus 237 ~~G~L~g~~~~~~~p~ 252 (346)
T 1lqa_A 237 GFGTLTGKYLNGAKPA 252 (346)
T ss_dssp GGGGGGTTTGGGCCCT
T ss_pred hhhhhcCccccccCCC
Confidence 9999999854433443
|
| >1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-53 Score=362.37 Aligned_cols=210 Identities=25% Similarity=0.353 Sum_probs=189.0
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCE
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENI 86 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~ 86 (235)
|++++||+++++||+||||||++|+ |+ .+++++.++|+.|++.|||+||||+.||.|.||+.+|+||++ .+|+++
T Consensus 23 M~~~~Lg~~~~~vs~lglGt~~~g~-~~--~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v 99 (319)
T 1ur3_M 23 VQRITIAPQGPEFSRFVMGYWRLMD-WN--MSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERM 99 (319)
T ss_dssp CCEEECSTTCCEEESSEEECTTTTT-TT--CCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTC
T ss_pred CceEECCCCCcccccccEeccccCC-CC--CCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCeE
Confidence 8999999999999999999999986 53 478999999999999999999999999999999999999987 479999
Q ss_pred EEEeccccccCCCc---ccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeC
Q 026625 87 QVATKFGFVELGFT---SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (235)
Q Consensus 87 ~I~tK~~~~~~~~~---~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS 163 (235)
+|+||++...+..+ ....+.+++.+++++++||++||+||||+|++|||+...+.+++|++|++|+++||||+||||
T Consensus 100 ~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvS 179 (319)
T 1ur3_M 100 EIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVS 179 (319)
T ss_dssp EEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEEE
T ss_pred EEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEec
Confidence 99999986432100 012357899999999999999999999999999999888899999999999999999999999
Q ss_pred CCCHHHHHHHHhcC--CeeEEeeccCcccccc-cchHHHHHHHhCCeEEecccCccccCCC
Q 026625 164 EASPDTIRRAHAVH--PITAVQLEWSLWARDI-ENEIVPLCRELGIGIVPYCPLGRGFFGG 221 (235)
Q Consensus 164 n~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~ 221 (235)
||+.++++++.+.. +++++|++||++++.. +.+++++|+++||++++||||++|.|..
T Consensus 180 n~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~G~L~~ 240 (319)
T 1ur3_M 180 NFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFN 240 (319)
T ss_dssp SCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSS
T ss_pred CCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccCccccC
Confidence 99999999998763 7899999999999975 4679999999999999999999998854
|
| >4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-53 Score=360.52 Aligned_cols=208 Identities=25% Similarity=0.305 Sum_probs=179.3
Q ss_pred CCCCceecCCCCcccCcceeccccCCC--------CCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHH
Q 026625 7 LQVPRVKLGTQGLEVSKLGYGCMSLSG--------CYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKAL 78 (235)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~G~~~~~~--------~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al 78 (235)
..|+|++||++|++||+||||||++++ .|+. .+++++.++|+.|++.|||+||||+.|| .+|+.+|++|
T Consensus 28 ~~m~~r~Lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~sE~~lG~al 104 (292)
T 4exb_A 28 LHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTI-PDDREAADLLALARDLGINLIDTAPAYG--RSEERLGPLL 104 (292)
T ss_dssp STTCCEECTTSSCEECSEEEECSTTTCC---------CC-CCHHHHHHHHHHHHHTTCCEEECCTTST--THHHHHHHHH
T ss_pred CCceeeecCCCCCccCCEeEcccccCCCcccccccccCC-CCHHHHHHHHHHHHHcCCCEEEcCCccc--hHHHHHHHHh
Confidence 368999999999999999999999986 3443 4889999999999999999999999998 7999999999
Q ss_pred hcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccC--CCCCCHH-HHHHHHHHHHHcC
Q 026625 79 KELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRV--DTSVPIE-ETIGEMKKLVEEG 155 (235)
Q Consensus 79 ~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~--~~~~~~~-~~~~~l~~l~~~G 155 (235)
+. +|++++|+||++..... +....+.+++.+++++++||++||+||||+|++||| +...+.. ++|++|++|+++|
T Consensus 105 ~~-~R~~v~I~TK~~~~~~~-~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~G 182 (292)
T 4exb_A 105 RG-QREHWVIVSKVGEEFVD-GQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREG 182 (292)
T ss_dssp TT-TGGGCEEEEEESBC--C-CSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTT
T ss_pred cc-CCCcEEEEEeeccccCC-CCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHCC
Confidence 95 89999999999864321 112335689999999999999999999999999999 4433444 8999999999999
Q ss_pred CccEEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCC
Q 026625 156 KIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (235)
Q Consensus 156 ~ir~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 222 (235)
|||+||||||+.++++++++. ++++|++||++++.. .+++++|+++||++++|+||++|+|+++
T Consensus 183 kir~iGvSn~~~~~l~~~~~~--~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a~spL~~G~L~~~ 246 (292)
T 4exb_A 183 LIGAYGLSGKTVEGGLRALRE--GDCAMVTYNLNERAE-RPVIEYAAAHAKGILVKKALASGHACLG 246 (292)
T ss_dssp SEEEEEEECSSHHHHHHHHHH--SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEEECCSCC------
T ss_pred CceEEEeCCCCHHHHHHHHHh--hcEEeeccccccCCH-HHHHHHHHHCCcEEEEeccccCCccCCC
Confidence 999999999999999999987 899999999999975 6899999999999999999999999875
|
| >3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-51 Score=341.36 Aligned_cols=193 Identities=26% Similarity=0.383 Sum_probs=176.1
Q ss_pred CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCC
Q 026625 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (235)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~ 84 (235)
+.|++++|+ +|++||+||||||+++ +.+++.++|+.|+++|||+||||+.|| +|+.+|++|++ .+|+
T Consensus 4 ~~m~~~~L~-~g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~G~~~~DTA~~Yg---~E~~lG~al~~~~~~R~ 72 (276)
T 3f7j_A 4 SLKDTVKLH-NGVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVARE 72 (276)
T ss_dssp STTCEEECT-TSCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHCSCGG
T ss_pred CCcceEECC-CCCEecceeecCCcCC-------CHHHHHHHHHHHHHcCCCEEECcCccc---CHHHHHHHHhhcCCCcc
Confidence 568999996 9999999999999864 458899999999999999999999999 79999999996 5899
Q ss_pred CEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCC
Q 026625 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (235)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn 164 (235)
+++|+||++... .+++.+++++++||++||+||||+|++|||+... ..++|++|++|+++||||+|||||
T Consensus 73 ~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~-~~~~~~~l~~l~~~Gkir~iGvSn 142 (276)
T 3f7j_A 73 ELFITSKVWNED---------QGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSN 142 (276)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSS-HHHHHHHHHHHHHTTSEEEEEEES
T ss_pred cEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCc-HHHHHHHHHHHHHcCCccEEEecc
Confidence 999999997643 5689999999999999999999999999998754 889999999999999999999999
Q ss_pred CCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCC
Q 026625 165 ASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (235)
Q Consensus 165 ~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 222 (235)
|++++++++++. .++.++|++||++.+. .+++++|+++||++++||||++|.|.+.
T Consensus 143 ~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~ 200 (276)
T 3f7j_A 143 FQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQLLDN 200 (276)
T ss_dssp CCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGTTTTC
T ss_pred CCHHHHHHHHHhcCCCceeeeeeeccccCC--HHHHHHHHHCCCEEEEecCCCCCccCCC
Confidence 999999999876 4578999999999874 7899999999999999999999987653
|
| >3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-51 Score=343.09 Aligned_cols=192 Identities=30% Similarity=0.438 Sum_probs=175.1
Q ss_pred CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCC
Q 026625 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (235)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~ 84 (235)
.+|++++| ++|++||+||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|+
T Consensus 24 ~~m~~~~L-~~g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~ 91 (283)
T 3o0k_A 24 MTVPTVKL-NDGNHIPQLGYGVWQI--------SNDEAVSAVSEALKAGYRHIDTATIYG---NEEGVGKAINGSGIARA 91 (283)
T ss_dssp CCCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHTSSSCGG
T ss_pred CCCceEEC-CCCCEECCeeEECccC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCCcc
Confidence 37999999 8999999999999975 468899999999999999999999999 79999999997 5799
Q ss_pred CEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCC-CCHHHHHHHHHHHHHcCCccEEEeC
Q 026625 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLS 163 (235)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvS 163 (235)
+++|+||++... .+++.+++++++||++||+||||+|++|||++. .+..++|++|++|+++||||+||||
T Consensus 92 ~~~i~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvS 162 (283)
T 3o0k_A 92 DIFLTTKLWNSD---------QGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVS 162 (283)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred cEEEEEccCCCC---------CCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceEEec
Confidence 999999998653 468999999999999999999999999999876 4578999999999999999999999
Q ss_pred CCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCC
Q 026625 164 EASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGG 221 (235)
Q Consensus 164 n~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 221 (235)
||++++++++++. .+++++|++||++.+ +.+++++|+++||++++||||++|.|..
T Consensus 163 n~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~l~~ 220 (283)
T 3o0k_A 163 NFRTADLERLIKESGVTPVLNQIELHPQFQ--QDELRLFHGKHDIATEAWSPLGQGKLLE 220 (283)
T ss_dssp SCCHHHHHHHHHHHSCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCC-CTT
T ss_pred cCcHHHHHHHHHhCCCCeEEEEeecCcccC--cHHHHHHHHHCCcEEEEecCCCCCcccc
Confidence 9999999999865 457899999999987 4689999999999999999999998764
|
| >3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-50 Score=346.80 Aligned_cols=194 Identities=25% Similarity=0.375 Sum_probs=175.8
Q ss_pred CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------
Q 026625 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (235)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------ 80 (235)
++|++++| ++|++||+||||||+++. .+.+++.++|+.|+++|||+||||+.|| +|+.+|++|++
T Consensus 4 ~~m~~~~L-~tg~~v~~lglGt~~~~~-----~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~ 74 (324)
T 3ln3_A 4 SXQHCVXL-NDGHLIPALGFGTYXPXE-----VPXSXSLEAACLALDVGYRHVDTAYAYQ---VEEEIGQAIQSXIXAGV 74 (324)
T ss_dssp --CCEEEC-TTSCEEESSEEECCCCTT-----SCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred cCCceEEC-CCCCCcCCeeecCCcccC-----CChHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhccCC
Confidence 46899999 999999999999998752 4789999999999999999999999999 79999999986
Q ss_pred CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-------------------CCCH
Q 026625 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPI 141 (235)
Q Consensus 81 ~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~ 141 (235)
++|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..++
T Consensus 75 ~~R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (324)
T 3ln3_A 75 VXREDLFVTTKLWCTC---------FRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDF 145 (324)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCH
T ss_pred cccceeEEEeeeCCcc---------CCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCH
Confidence 4899999999998653 56899999999999999999999999999975 3468
Q ss_pred HHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhcC----CeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccc
Q 026625 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 142 ~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G 217 (235)
.++|++|++|+++|+||+||||||+.++++++++.. +++++|++||++.+ +.+++++|+++||++++||||++|
T Consensus 146 ~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~g 223 (324)
T 3ln3_A 146 CDTWERLEECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLN--QRXLLDYCESXDIVLVAYGALGTQ 223 (324)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTSCC
T ss_pred HHHHHHHHHHHhcCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccc--hHHHHHHHHHcCCEEEEecCCCCC
Confidence 899999999999999999999999999999998763 37799999999987 478999999999999999999999
Q ss_pred cCC
Q 026625 218 FFG 220 (235)
Q Consensus 218 ~L~ 220 (235)
.+.
T Consensus 224 ~~~ 226 (324)
T 3ln3_A 224 RYX 226 (324)
T ss_dssp CCT
T ss_pred Ccc
Confidence 864
|
| >3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=343.21 Aligned_cols=191 Identities=26% Similarity=0.492 Sum_probs=177.0
Q ss_pred CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCC
Q 026625 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (235)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~ 84 (235)
+.|++++|| |++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|+
T Consensus 22 ~~m~~~~l~--g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~ 88 (298)
T 3up8_A 22 SMMHAVSSN--GANIPALGFGTFRM--------SGAEVLRILPQALKLGFRHVDTAQIYG---NEAEVGEAIQKSGIPRA 88 (298)
T ss_dssp GSCCEECCT--TCCEESEEEECTTC--------CHHHHHHHHHHHHHHTCCEEECCTTTT---CHHHHHHHHHHHTCCGG
T ss_pred ccCceEEeC--CeecCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHcCCChH
Confidence 468999997 99999999999975 357899999999999999999999999 89999999997 5899
Q ss_pred CEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCC
Q 026625 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (235)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn 164 (235)
+++|+||++... .+++.+++++++||++||+||||+|++|||+...++.++|++|++|+++|+||+|||||
T Consensus 89 ~v~I~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 159 (298)
T 3up8_A 89 DVFLTTKVWVDN---------YRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISN 159 (298)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred HEEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEEEcC
Confidence 999999998643 57999999999999999999999999999998888999999999999999999999999
Q ss_pred CCHHHHHHHHhcC--CeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCC
Q 026625 165 ASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGG 221 (235)
Q Consensus 165 ~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 221 (235)
|+.++++++++.. +++++|++||++.+ +.+++++|+++||++++|+||++|.|..
T Consensus 160 ~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~l~~ 216 (298)
T 3up8_A 160 FNTTQMEEAARLSDAPIATNQVEYHPYLD--QTKVLQTARRLGMSLTSYYAMANGKVPA 216 (298)
T ss_dssp CCHHHHHHHHHHCSSCEEEEEEECBTTBC--CHHHHHHHHHHTCEEEEECTTGGGHHHH
T ss_pred CCHHHHHHHHHhCCCCceEEEEecccccc--cHHHHHHHHHCCCEEEEECCCcCCcccc
Confidence 9999999998764 79999999999988 4789999999999999999999997653
|
| >1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=340.15 Aligned_cols=192 Identities=26% Similarity=0.395 Sum_probs=176.1
Q ss_pred ccCCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CC
Q 026625 5 KKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LP 82 (235)
Q Consensus 5 ~~~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~ 82 (235)
.|..|++++| ++|++||+||||||+++ +++++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+
T Consensus 5 ~~~~m~~~~l-~~g~~v~~lglGt~~~~-------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~ 73 (281)
T 1vbj_A 5 FMALTQSLKL-SNGVMMPVLGFGMWKLQ-------DGNEAETATMWAIKSGYRHIDTAAIYK---NEESAGRAIASCGVP 73 (281)
T ss_dssp TTCCCCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSSSC
T ss_pred cCCCCceEEC-CCCCeecCeeEECCcCC-------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhcCCC
Confidence 4678999999 89999999999999864 347889999999999999999999999 79999999996 57
Q ss_pred CCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe
Q 026625 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 162 (235)
Q Consensus 83 R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 162 (235)
|++++|+||++... .+++.+++++++||++||+||||+|++|||+ ..+..++|++|++|+++|+||+|||
T Consensus 74 R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~~~~~~~~al~~l~~~Gkir~iGv 143 (281)
T 1vbj_A 74 REELFVTTKLWNSD---------QGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KDKFIDTWKAFEKLYADKKVRAIGV 143 (281)
T ss_dssp GGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SSCHHHHHHHHHHHHHTTSBSCEEE
T ss_pred hhHEEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CCCHHHHHHHHHHHHHCCCccEEEe
Confidence 99999999998643 5689999999999999999999999999998 6678899999999999999999999
Q ss_pred CCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccC
Q 026625 163 SEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219 (235)
Q Consensus 163 Sn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 219 (235)
|||++++++++++. .+++++|++||++++. .+++++|+++||++++||||++|.+
T Consensus 144 Sn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~ 200 (281)
T 1vbj_A 144 SNFHEHHIEELLKHCKVAPMVNQIELHPLLNQ--KALCEYCKSKNIAVTAWSPLGQGHL 200 (281)
T ss_dssp ESCCHHHHHHHHTSCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGTT
T ss_pred eCCCHHHHHHHHHhCCCCceeeeEEeccccCC--HHHHHHHHHcCCEEEEecCCcCCCC
Confidence 99999999999876 4579999999999885 6899999999999999999999953
|
| >1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-50 Score=345.64 Aligned_cols=194 Identities=28% Similarity=0.422 Sum_probs=175.5
Q ss_pred CCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------C
Q 026625 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------L 81 (235)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~ 81 (235)
+|++++| ++|++||+||||||+++. .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .
T Consensus 4 ~~~~~~L-~tg~~v~~lglGt~~~g~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~ 74 (323)
T 1afs_A 4 ISLRVAL-NDGNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDGTV 74 (323)
T ss_dssp GGCEEEC-TTSCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTTSC
T ss_pred CCceEEC-CCCCeECCeeEecccCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHHhcCCC
Confidence 5789999 799999999999998753 3567899999999999999999999999 79999999986 4
Q ss_pred CCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-------------------CCCHH
Q 026625 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIE 142 (235)
Q Consensus 82 ~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~~ 142 (235)
+|++++|+||++... .+++.+++++++||++||+||||+|++|||.. ..++.
T Consensus 75 ~R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~~ 145 (323)
T 1afs_A 75 KREDIFYTSKLWSTF---------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDIC 145 (323)
T ss_dssp CGGGCEEEEEECGGG---------CSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCHH
T ss_pred ChHHeEEEEecCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCHH
Confidence 899999999997543 45788999999999999999999999999942 23678
Q ss_pred HHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhcC----CeeEEeeccCcccccccchHHHHHHHhCCeEEecccCcccc
Q 026625 143 ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (235)
Q Consensus 143 ~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 218 (235)
++|++|++|+++|+||+||||||+.++++++++.. +|+++|++||++.+. .+++++|+++||++++||||++|.
T Consensus 146 e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~ 223 (323)
T 1afs_A 146 DTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ--SKMLDYCKSKDIILVSYCTLGSSR 223 (323)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCCC
T ss_pred HHHHHHHHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccch--HHHHHHHHHcCCEEEEecCccCCc
Confidence 99999999999999999999999999999998763 669999999998874 689999999999999999999999
Q ss_pred CCC
Q 026625 219 FGG 221 (235)
Q Consensus 219 L~~ 221 (235)
|++
T Consensus 224 l~~ 226 (323)
T 1afs_A 224 DKT 226 (323)
T ss_dssp CTT
T ss_pred ccc
Confidence 976
|
| >2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-50 Score=338.62 Aligned_cols=190 Identities=25% Similarity=0.412 Sum_probs=173.2
Q ss_pred CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCC
Q 026625 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (235)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~ 84 (235)
.+|++++| ++|++||+||||||+++ .+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|+
T Consensus 9 ~~m~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~v~~Al~~Gi~~iDTA~~Yg---~E~~lG~al~~~~~~R~ 76 (283)
T 2wzm_A 9 AAIPTVTL-NDDNTLPVVGIGVGELS--------DSEAERSVSAALEAGYRLIDTAAAYG---NEAAVGRAIAASGIPRD 76 (283)
T ss_dssp -CCCEEEC-TTSCEEESEEEECTTCC--------HHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHTCCCGG
T ss_pred CCCceEEC-CCCCEEcceeEECCCCC--------hHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHhcCCCcc
Confidence 57999999 99999999999999753 47889999999999999999999999 79999999996 5899
Q ss_pred CEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCC-CCHHHHHHHHHHHHHcCCccEEEeC
Q 026625 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLS 163 (235)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvS 163 (235)
+++|+||++... .+++.+++++++||++||+||||+|++|||+.. .+..++|++|++|+++|+||+||||
T Consensus 77 ~v~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvS 147 (283)
T 2wzm_A 77 EIYVTTKLATPD---------QGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGVC 147 (283)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred cEEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEEc
Confidence 999999997542 568999999999999999999999999999864 4577999999999999999999999
Q ss_pred CCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccC
Q 026625 164 EASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219 (235)
Q Consensus 164 n~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 219 (235)
||++++++++++. .+|+++|++||++++. .+++++|+++||++++||||++|.|
T Consensus 148 n~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l 203 (283)
T 2wzm_A 148 NFGAEDLETIVSLTYFTPAVNQIELHPLLNQ--AALREVNAGYNIVTEAYGPLGVGRL 203 (283)
T ss_dssp SCCHHHHHHHHHHHCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTTGG
T ss_pred CCCHHHHHHHHHhcCCCcccccccCCcccCC--HHHHHHHHHCCCEEEEecCCCCCcc
Confidence 9999999999875 4569999999999985 5799999999999999999999954
|
| >1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-50 Score=344.65 Aligned_cols=194 Identities=26% Similarity=0.337 Sum_probs=175.8
Q ss_pred ccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCEEEEeccccccC
Q 026625 20 EVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVEL 97 (235)
Q Consensus 20 ~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~~I~tK~~~~~~ 97 (235)
.+|+||||||+||. ..+++++.++|+.|+++|||+||||+.||.|.||+.+|++|+. ..|++++|+||++....
T Consensus 4 ~~~~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~~ 79 (327)
T 1gve_A 4 ARPATVLGAMEMGR----RMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMFG 79 (327)
T ss_dssp CCCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCTT
T ss_pred CCCCeEEcccccCC----CCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCCC
Confidence 36899999999875 1478999999999999999999999999999999999999985 24888999999964321
Q ss_pred CCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhc-
Q 026625 98 GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV- 176 (235)
Q Consensus 98 ~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~- 176 (235)
...+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++||||+||||||+.++++++++.
T Consensus 80 ------~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 153 (327)
T 1gve_A 80 ------KTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLC 153 (327)
T ss_dssp ------CCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred ------CCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence 1367999999999999999999999999999998888999999999999999999999999999999888654
Q ss_pred -----CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCCC
Q 026625 177 -----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKA 223 (235)
Q Consensus 177 -----~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~ 223 (235)
.+++++|++||++++..+.+++++|+++||++++||||++|+|++++
T Consensus 154 ~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~ 205 (327)
T 1gve_A 154 KKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGRY 205 (327)
T ss_dssp HHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCC
T ss_pred HHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEecccccccccCcc
Confidence 56899999999999987789999999999999999999999999984
|
| >1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-50 Score=338.48 Aligned_cols=188 Identities=25% Similarity=0.357 Sum_probs=169.0
Q ss_pred CCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCC
Q 026625 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (235)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~ 85 (235)
+|++++| ++|++||+||||||+++ .+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|++
T Consensus 2 ~M~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~ 69 (278)
T 1hw6_A 2 TVPSIVL-NDGNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDD 69 (278)
T ss_dssp CCCEEEC-TTSCEEESBCEECCSCC--------GGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGGG
T ss_pred CCceEEC-CCCCccCCeeEECCcCC--------hHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCChhh
Confidence 4789999 99999999999999864 26788999999999999999999999 79999999986 58999
Q ss_pred EEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-CCCHHHHHHHHHHHHHcCCccEEEeCC
Q 026625 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLSE 164 (235)
Q Consensus 86 ~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvSn 164 (235)
++|+||++... .+++.+++++++||++||+||||+|++|||+. ..+..++|++|++|+++|+||+|||||
T Consensus 70 ~~i~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn 140 (278)
T 1hw6_A 70 LFITTKLWNDR---------HDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSN 140 (278)
T ss_dssp CEEEEEECCC--------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred EEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEecC
Confidence 99999997532 46788999999999999999999999999987 367899999999999999999999999
Q ss_pred CCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCcccc
Q 026625 165 ASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (235)
Q Consensus 165 ~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 218 (235)
|+.++++++++. .+|+++|++||++++. .+++++|+++||++++||||++|.
T Consensus 141 ~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~ 194 (278)
T 1hw6_A 141 HLVPHLERIVAATGVVPAVNQIELHPAYQQ--REITDWAAAHDVKIESWGPLGQGK 194 (278)
T ss_dssp CCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGS
T ss_pred CCHHHHHHHHHhcCCCceeEEEEeCcccCC--HHHHHHHHHcCCEEEEeccccCCC
Confidence 999999999875 4569999999999985 689999999999999999999993
|
| >1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-50 Score=342.63 Aligned_cols=188 Identities=30% Similarity=0.488 Sum_probs=172.2
Q ss_pred CceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------CCC
Q 026625 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (235)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~~R 83 (235)
++++| ++|++||+||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|
T Consensus 6 ~~~~l-~~g~~vs~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R 73 (317)
T 1qwk_A 6 ASIKL-SNGVEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVKR 73 (317)
T ss_dssp CEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCCG
T ss_pred ceEEC-CCCCEeCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCCh
Confidence 78999 7999999999999863 578999999999999999999999999 79999999986 489
Q ss_pred CCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC---------CCCHHHHHHHHHHHHHc
Q 026625 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT---------SVPIEETIGEMKKLVEE 154 (235)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~---------~~~~~~~~~~l~~l~~~ 154 (235)
++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..+..++|++|++|+++
T Consensus 74 ~~~~i~TK~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~l~~~ 144 (317)
T 1qwk_A 74 EELFITTKAWTHE---------LAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKA 144 (317)
T ss_dssp GGCEEEEEECTTT---------SSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHHT
T ss_pred hheEEEeeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccccccCCCHHHHHHHHHHHHHc
Confidence 9999999997532 46788999999999999999999999999974 34688999999999999
Q ss_pred CCccEEEeCCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCC
Q 026625 155 GKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220 (235)
Q Consensus 155 G~ir~iGvSn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~ 220 (235)
|+||+||||||+.++++++++. .+++++|++||++.+. .+++++|+++||++++||||++|.|+
T Consensus 145 Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~ 210 (317)
T 1qwk_A 145 GLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQ--HDHVDFCKKHNISVTSYATLGSPGRV 210 (317)
T ss_dssp TSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCSCCEE
T ss_pred CCeeEEEecCCCHHHHHHHHHhcCCccceecceeccccCc--HHHHHHHHHcCCEEEEecCccCCCcc
Confidence 9999999999999999999876 3579999999999874 68999999999999999999999876
|
| >4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-50 Score=337.98 Aligned_cols=197 Identities=26% Similarity=0.377 Sum_probs=175.3
Q ss_pred ccc-CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--
Q 026625 4 DKK-LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-- 80 (235)
Q Consensus 4 ~~~-~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-- 80 (235)
.-| .+|+|++| ++|++||.||||||+++ +.+++.++|+.|+++|||+||||+.|| +|+.+|++++.
T Consensus 7 ~~m~~~~~~v~L-n~G~~ip~lGlGtw~~~-------d~~e~~~~v~~Al~~Gin~~DTA~~Yg---sE~~vG~~l~~~~ 75 (290)
T 4gie_A 7 HHMNCNYNCVTL-HNSVRMPQLGLGVWRAQ-------DGAETANAVRWAIEAGYRHIDTAYIYS---NERGVGQGIRESG 75 (290)
T ss_dssp GTCSSSSCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHC
T ss_pred cccCCCCCEEEc-CCCCCccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEecccccC---CHHHHHHHHHhcC
Confidence 346 58999999 89999999999998764 457899999999999999999999999 89999999998
Q ss_pred CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE
Q 026625 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI 160 (235)
Q Consensus 81 ~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i 160 (235)
.+|++++|+||++... .+++.+.+++++||+|||+||||+|++|||+. .+..++|++|++|+++||||+|
T Consensus 76 ~~r~~~~i~tk~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~-~~~~e~~~al~~l~~~Gkir~i 145 (290)
T 4gie_A 76 VPREEVWVTTKVWNSD---------QGYEKTLAAFERSRELLGLEYIDLYLIHWPGK-KKFVDTWKALEKLYEEKKVRAI 145 (290)
T ss_dssp CCGGGSEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCS-SSHHHHHHHHHHHHHTTSEEEE
T ss_pred CcchhccccccccccC---------CChHHHHHHHHHHHHHhCCCceeeEEecCCCC-CcchHHHHHHHHHHHCCCccee
Confidence 7899999999998654 46899999999999999999999999999976 4678999999999999999999
Q ss_pred EeCCCCHHHHHHHHhcCC--eeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCCC
Q 026625 161 GLSEASPDTIRRAHAVHP--ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKA 223 (235)
Q Consensus 161 GvSn~~~~~l~~~~~~~~--~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~ 223 (235)
|||||+++++.++..... +.++|++++.... +.+++++|+++||++++||||++|.|++..
T Consensus 146 GvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a~spl~~G~l~~~~ 208 (290)
T 4gie_A 146 GVSNFEPHHLTELFKSCKIRPMVNQVELHPLFQ--QRTLREFCKQHNIAITAWSPLGSGEEAGIL 208 (290)
T ss_dssp EEESCCHHHHHHHHTTCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCSSGGGCGG
T ss_pred eecCCCHHHHHHHHHhccCCCceeeEeccccch--hHHHHHHHHHcCceEeeecccccccccccc
Confidence 999999999999987744 5566666555444 578999999999999999999999998763
|
| >3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-49 Score=340.91 Aligned_cols=195 Identities=25% Similarity=0.347 Sum_probs=176.2
Q ss_pred CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------
Q 026625 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (235)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------ 80 (235)
..|++++| ++|++||+||||||++++ ..+.+++.++|+.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 5 ~~~~~~~L-~tg~~v~~lglGt~~~g~----~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 76 (326)
T 3buv_A 5 AASHRIPL-SDGNSIPIIGLGTYSEPK----STPKGACATSVKVAIDTGYRHIDGAYIYQ---NEHEVGEAIREKIAEGK 76 (326)
T ss_dssp SSCCEEEC-TTSCEEESBCEECCCCGG----GCCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEC-CCCCeeCCeeEcccCCCC----CCCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCC
Confidence 45889999 899999999999998763 23567899999999999999999999999 79999999986
Q ss_pred CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-------------------CCCH
Q 026625 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPI 141 (235)
Q Consensus 81 ~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~ 141 (235)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..++
T Consensus 77 ~~R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (326)
T 3buv_A 77 VRREDIFYCGKLWATN---------HVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNL 147 (326)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCH
T ss_pred CChhHeEEEeeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccH
Confidence 4899999999997543 56899999999999999999999999999963 2367
Q ss_pred HHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhcC--C--eeEEeeccCcccccccchHHHHHHHhCCeEEecccCccc
Q 026625 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--P--ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 142 ~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~--~--~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G 217 (235)
.++|++|++|+++|+||+||||||+.++++++++.. + |+++|++||++.+. .+++++|+++||++++||||++|
T Consensus 148 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 225 (326)
T 3buv_A 148 CATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQ--PKLLKFCQQHDIVITAYSPLGTS 225 (326)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC
T ss_pred HHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCc--HHHHHHHHHcCCEEEEeccccCC
Confidence 899999999999999999999999999999998763 4 77999999999874 68999999999999999999999
Q ss_pred cCC
Q 026625 218 FFG 220 (235)
Q Consensus 218 ~L~ 220 (235)
.|+
T Consensus 226 ~l~ 228 (326)
T 3buv_A 226 RNP 228 (326)
T ss_dssp CCT
T ss_pred ccc
Confidence 987
|
| >1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-50 Score=342.19 Aligned_cols=195 Identities=27% Similarity=0.426 Sum_probs=173.6
Q ss_pred CCCCcee-cCC-CCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc----
Q 026625 7 LQVPRVK-LGT-QGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE---- 80 (235)
Q Consensus 7 ~~m~~~~-lg~-~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~---- 80 (235)
++|++++ |++ ||++||+|||||++++. +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 4 ~~m~~~~~l~~~tg~~v~~lglGt~~~~~------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---sE~~vG~al~~~~~~ 74 (312)
T 1zgd_A 4 VEIPTKVLTNTSSQLKMPVVGMGSAPDFT------CKKDTKDAIIEAIKQGYRHFDTAAAYG---SEQALGEALKEAIEL 74 (312)
T ss_dssp -CCCEEECTTSTTCCEEESBCBCCSCCTT------CCSCHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHT
T ss_pred CCCchhhhcCCCCCCCCCceeEcCcccCC------CHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhc
Confidence 4679999 987 79999999999955321 346788999999999999999999999 89999999986
Q ss_pred --CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC----------------CCCHH
Q 026625 81 --LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT----------------SVPIE 142 (235)
Q Consensus 81 --~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~----------------~~~~~ 142 (235)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..+..
T Consensus 75 g~~~R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~ 145 (312)
T 1zgd_A 75 GLVTRDDLFVTSKLWVTE---------NHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVK 145 (312)
T ss_dssp TSCCGGGCEEEEEECGGG---------CSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHH
T ss_pred CCCcchheEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCccccccccccccccccHH
Confidence 4899999999997543 46889999999999999999999999999963 24678
Q ss_pred HHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCC
Q 026625 143 ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220 (235)
Q Consensus 143 ~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~ 220 (235)
++|++|++|+++|+||+||||||+.++++++++. .+|+++|++||++++. .+++++|+++||++++||||++|.+.
T Consensus 146 e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~~~ 223 (312)
T 1zgd_A 146 GVWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQ--KKLREFCNAHGIVLTAFSPVRKGASR 223 (312)
T ss_dssp HHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTTTT
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCC--HHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 9999999999999999999999999999999876 3689999999999874 68999999999999999999998765
Q ss_pred C
Q 026625 221 G 221 (235)
Q Consensus 221 ~ 221 (235)
+
T Consensus 224 ~ 224 (312)
T 1zgd_A 224 G 224 (312)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=336.79 Aligned_cols=192 Identities=26% Similarity=0.378 Sum_probs=173.8
Q ss_pred CCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCC
Q 026625 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (235)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~ 85 (235)
+.++.+| ++|++||+||||||+++. .+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|++
T Consensus 9 ~~~~~~l-~~g~~v~~lglGt~~~~~-------~~~~~~~v~~Al~~G~~~~DTA~~Yg---~E~~vG~al~~~~~~R~~ 77 (288)
T 4f40_A 9 DKAMVTL-SNGVKMPQFGLGVWQSPA-------GEVTENAVKWALCAGYRHIDTAAIYK---NEESVGAGLRASGVPRED 77 (288)
T ss_dssp TTCEEEC-TTSCEEESBCEECTTCCT-------THHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHTCCGGG
T ss_pred cCCeEEC-CCCCeecceeEECCcCCC-------cHHHHHHHHHHHHcCCCeEECccccc---CHHHHHHHHHhcCCChhh
Confidence 4678899 899999999999998763 37889999999999999999999999 89999999997 58999
Q ss_pred EEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCC-------CCHHHHHHHHHHHHHcCCcc
Q 026625 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-------VPIEETIGEMKKLVEEGKIK 158 (235)
Q Consensus 86 ~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~-------~~~~~~~~~l~~l~~~G~ir 158 (235)
++|+||++... .+++.+++++++||++||+||||+|++|||+.. .+..++|++|++|+++|+||
T Consensus 78 ~~I~TK~~~~~---------~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gkir 148 (288)
T 4f40_A 78 VFITTKLWNTE---------QGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVR 148 (288)
T ss_dssp CEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSEE
T ss_pred EEEEEecCCCc---------CCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCcc
Confidence 99999998653 568999999999999999999999999999863 55789999999999999999
Q ss_pred EEEeCCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCC
Q 026625 159 YIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGG 221 (235)
Q Consensus 159 ~iGvSn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 221 (235)
+||||||+.++++++++. .+++++|++||++++. .+++++|+++||++++||||++|.|++
T Consensus 149 ~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~ 211 (288)
T 4f40_A 149 AIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVEAWSPLGQGKLLS 211 (288)
T ss_dssp EEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTC--CGGG
T ss_pred EEEeccCCHHHHHHHHHhCCCCCeEEeccCccccCC--HHHHHHHHHCCCEEEEecCCCCCcccc
Confidence 999999999999999875 4689999999999985 689999999999999999999998865
|
| >1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=341.36 Aligned_cols=194 Identities=26% Similarity=0.375 Sum_probs=174.4
Q ss_pred CCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------C
Q 026625 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------L 81 (235)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~ 81 (235)
++++++| ++|++||+||||||+++. .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .
T Consensus 4 ~~~~~~L-~tg~~v~~lglGt~~~~~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~~~~ 74 (331)
T 1s1p_A 4 KQQCVKL-NDGHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSV 74 (331)
T ss_dssp --CEEEC-TTSCEEESEEEECCCCTT-----SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEC-CCCCEeCCeeEcCccCCC-----CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHhcCCC
Confidence 5689999 899999999999998753 3567899999999999999999999999 79999999986 4
Q ss_pred CCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-------------------CCCHH
Q 026625 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIE 142 (235)
Q Consensus 82 ~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~~ 142 (235)
+|++++|+||++... .+++.+++++++||++||+||||+|++|||.. ..++.
T Consensus 75 ~R~~~~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~ 145 (331)
T 1s1p_A 75 KREDIFYTSKLWSTF---------HRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLC 145 (331)
T ss_dssp CGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHH
T ss_pred CchheEEEeccCCcc---------CCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCHH
Confidence 899999999997543 56899999999999999999999999999942 23678
Q ss_pred HHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhcC----CeeEEeeccCcccccccchHHHHHHHhCCeEEecccCcccc
Q 026625 143 ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (235)
Q Consensus 143 ~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 218 (235)
++|++|++|+++|+||+||||||+.++++++++.. +|+++|++||++.+. .+++++|+++||++++||||++|.
T Consensus 146 e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~ 223 (331)
T 1s1p_A 146 TTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVAYSALGSQR 223 (331)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCCC
T ss_pred HHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcCh--HHHHHHHHHcCCEEEEeccccCCc
Confidence 99999999999999999999999999999998763 679999999999874 689999999999999999999999
Q ss_pred CCC
Q 026625 219 FGG 221 (235)
Q Consensus 219 L~~ 221 (235)
|++
T Consensus 224 l~~ 226 (331)
T 1s1p_A 224 DKR 226 (331)
T ss_dssp CTT
T ss_pred ccc
Confidence 976
|
| >1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-49 Score=337.10 Aligned_cols=190 Identities=28% Similarity=0.478 Sum_probs=172.0
Q ss_pred CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------
Q 026625 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (235)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------ 80 (235)
..|++++| ++|++||+||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 3 ~~m~~~~L-~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 70 (322)
T 1mi3_A 3 ASIPDIKL-SSGHLMPSIGFGCWKL--------ANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGL 70 (322)
T ss_dssp -CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTS
T ss_pred CCCceEEC-CCCCEECCeeeeCCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCC
Confidence 46899999 7999999999999863 678999999999999999999999999 79999999986
Q ss_pred CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-----------------------
Q 026625 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT----------------------- 137 (235)
Q Consensus 81 ~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~----------------------- 137 (235)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+.
T Consensus 71 ~~R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~ 141 (322)
T 1mi3_A 71 VKREEIFLTSKLWNNY---------HDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFV 141 (322)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCC
T ss_pred CChhhEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCccccccccccccccccccc
Confidence 4899999999997543 56899999999999999999999999999942
Q ss_pred --CCCHHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEeccc
Q 026625 138 --SVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 138 --~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~sp 213 (235)
..++.++|++|++|+++|+||+||||||+.++++++++. .+++++|++||++.+. .+++++|+++||++++|||
T Consensus 142 ~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~sp 219 (322)
T 1mi3_A 142 YEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITAYSS 219 (322)
T ss_dssp BCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEECT
T ss_pred ccCCCHHHHHHHHHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCc--HHHHHHHHHcCCEEEEECC
Confidence 225789999999999999999999999999999999876 4689999999999874 6899999999999999999
Q ss_pred CccccC
Q 026625 214 LGRGFF 219 (235)
Q Consensus 214 l~~G~L 219 (235)
|++|.+
T Consensus 220 L~~G~~ 225 (322)
T 1mi3_A 220 FGPQSF 225 (322)
T ss_dssp TTTHHH
T ss_pred CCCCCc
Confidence 999943
|
| >1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-49 Score=333.81 Aligned_cols=188 Identities=28% Similarity=0.334 Sum_probs=171.2
Q ss_pred cCCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCC
Q 026625 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPR 83 (235)
Q Consensus 6 ~~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R 83 (235)
+++|++++| ++|++||+||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|
T Consensus 22 ~~~~~~~~L-~tg~~vs~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~R 89 (296)
T 1mzr_A 22 LANPTVIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNR 89 (296)
T ss_dssp -CCCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCG
T ss_pred CCCCceEEC-CCCCeeCCEeEECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccc---CHHHHHHHHHhcCCCc
Confidence 357899999 7999999999999975 358899999999999999999999999 79999999996 579
Q ss_pred CCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-CCCHHHHHHHHHHHHHcCCccEEEe
Q 026625 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGL 162 (235)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGv 162 (235)
++++|+||++... . +.+++++++||++||+||||+|++|||++ ..+..++|++|++|+++||||+|||
T Consensus 90 ~~v~I~TK~~~~~---------~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGv 158 (296)
T 1mzr_A 90 EELFITTKLWNDD---------H--KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGV 158 (296)
T ss_dssp GGCEEEEEECGGG---------T--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred ccEEEEeccCCCc---------H--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCEEEE
Confidence 9999999997542 1 67999999999999999999999999987 4678999999999999999999999
Q ss_pred CCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCcccc
Q 026625 163 SEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (235)
Q Consensus 163 Sn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 218 (235)
|||++++++++++. .+++++|++||++++. .+++++|+++||++++|+||++|.
T Consensus 159 Sn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~ 214 (296)
T 1mzr_A 159 CNFQIHHLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLAQGG 214 (296)
T ss_dssp ESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTC
T ss_pred eCCCHHHHHHHHHhcCCCceEEeeecccccCC--HHHHHHHHHCCCeEEEeccccCCc
Confidence 99999999999864 5678999999999985 689999999999999999999994
|
| >3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-49 Score=337.92 Aligned_cols=198 Identities=26% Similarity=0.428 Sum_probs=166.8
Q ss_pred cccCCCCce-ecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHh---
Q 026625 4 DKKLQVPRV-KLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALK--- 79 (235)
Q Consensus 4 ~~~~~m~~~-~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~--- 79 (235)
+.|-+++.. .-+++|.+||.||||||++ +++++.++|+.|++.|||+||||+.|| +|+.+|++|+
T Consensus 7 ~~~~~~~~~~~~~~tg~~vp~lGlGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~vG~al~~~~ 75 (334)
T 3krb_A 7 HHMGTLEAQTQGPGSMQYPPRLGFGTWQA--------PPEAVQTAVETALMTGYRHIDCAYVYQ---NEEAIGRAFGKIF 75 (334)
T ss_dssp --------------CCSSCCSBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHH
T ss_pred ccccceecCCcCCCCCCccCCeeeeCCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHh
Confidence 345555543 3447899999999999873 678999999999999999999999999 8999999998
Q ss_pred -----cCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC--------------C--
Q 026625 80 -----ELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------S-- 138 (235)
Q Consensus 80 -----~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~--------------~-- 138 (235)
..+|++++|+||++... .+++.+++++++||++||+||||+|++|||.. .
T Consensus 76 ~~~~~g~~R~~v~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~ 146 (334)
T 3krb_A 76 KDASSGIKREDVWITSKLWNYN---------HRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGR 146 (334)
T ss_dssp HCTTSSCCGGGCEEEEEECGGG---------CSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSC
T ss_pred hhccCCCChhhEEEEeeeCCCC---------CCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCccccccc
Confidence 45899999999998653 46889999999999999999999999999943 1
Q ss_pred -----CCHHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhcC--CeeEEeeccCcccccccchHHHHHHHhCCeEEec
Q 026625 139 -----VPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPY 211 (235)
Q Consensus 139 -----~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~ 211 (235)
.++.++|++|++|+++||||+||||||+.++++++++.. +++++|++||++.+. .+++++|+++||++++|
T Consensus 147 ~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~c~~~gI~v~ay 224 (334)
T 3krb_A 147 AMLEKVPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPN--DATVKFCLDNGIGVTAY 224 (334)
T ss_dssp BCBCCCCHHHHHHHHHHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCccccc--HHHHHHHHHcCCEEEEE
Confidence 467899999999999999999999999999999998764 789999999999874 78999999999999999
Q ss_pred ccCccccCCCCC
Q 026625 212 CPLGRGFFGGKA 223 (235)
Q Consensus 212 spl~~G~L~~~~ 223 (235)
|||++|+|++++
T Consensus 225 spL~~G~L~~~~ 236 (334)
T 3krb_A 225 SPMGGSYADPRD 236 (334)
T ss_dssp STTCCSBC----
T ss_pred ecCCCCcccCCC
Confidence 999999999874
|
| >3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-49 Score=337.92 Aligned_cols=189 Identities=27% Similarity=0.406 Sum_probs=171.6
Q ss_pred CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------
Q 026625 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (235)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------ 80 (235)
.+|++++|+ +|++||+||||||++ +.+++.++|+.|+++|||+||||+.|| +|+.+|++|++
T Consensus 23 ~~m~~~~L~-tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~ 90 (335)
T 3h7u_A 23 NAITFFKLN-TGAKFPSVGLGTWQA--------SPGLVGDAVAAAVKIGYRHIDCAQIYG---NEKEIGAVLKKLFEDRV 90 (335)
T ss_dssp -CCCEEECT-TSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTS
T ss_pred cCCceEEcC-CCCEecceeEeCCcC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHHHHhcCC
Confidence 479999995 999999999999863 568899999999999999999999999 89999999986
Q ss_pred CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC--------------CCCHHHHHH
Q 026625 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------SVPIEETIG 146 (235)
Q Consensus 81 ~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~--------------~~~~~~~~~ 146 (235)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..++.++|+
T Consensus 91 ~~R~~v~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~ 161 (335)
T 3h7u_A 91 VKREDLFITSKLWCTD---------HDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWK 161 (335)
T ss_dssp CCGGGCEEEEEECGGG---------CSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCCHHHHHH
T ss_pred CCcceeEEEeeeCCCC---------CCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccccccccccCCHHHHHH
Confidence 3899999999997543 46889999999999999999999999999964 246789999
Q ss_pred HHHHHHHcCCccEEEeCCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCcccc
Q 026625 147 EMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (235)
Q Consensus 147 ~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 218 (235)
+|++|+++||||+||||||+.++++++++. .+++++|++||++.+. .+++++|+++||++++|+||++|-
T Consensus 162 aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~sPL~~g~ 233 (335)
T 3h7u_A 162 AMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQ--TKLQEFCKSKGVHLSAYSPLGSPG 233 (335)
T ss_dssp HHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCTT
T ss_pred HHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCC--HHHHHHHHHCCCEEEEeccCcCCC
Confidence 999999999999999999999999999875 4679999999999884 689999999999999999999763
|
| >3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=333.79 Aligned_cols=186 Identities=24% Similarity=0.384 Sum_probs=169.2
Q ss_pred CceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------CCC
Q 026625 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (235)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~~R 83 (235)
++++| +||++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|
T Consensus 3 ~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~R 70 (316)
T 3o3r_A 3 TFVKL-RTKAKMPLVGLGTWKS--------PPGQVKEAVKAAIDAGYRHFDCAYVYQ---NESEVGEAIQEKIKEKAVRR 70 (316)
T ss_dssp CEEEC-TTSCEEESBEEBCTTC--------CTTHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCCG
T ss_pred CeEEC-CCCCEeCCeeeECCcC--------CcHHHHHHHHHHHHcCCCEEEccCccC---CHHHHHHHHHHHHhhCCCCh
Confidence 57788 8999999999999864 346789999999999999999999999 79999999986 589
Q ss_pred CCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCC-------------------CCCCHHHH
Q 026625 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVD-------------------TSVPIEET 144 (235)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~-------------------~~~~~~~~ 144 (235)
++++|+||++... .+++.+++++++||++||+||||+|++|||+ ...++.++
T Consensus 71 ~~v~I~TK~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 141 (316)
T 3o3r_A 71 EDLFIVSKLWSTF---------FEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDA 141 (316)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHH
T ss_pred HHcEEEeeeCCCc---------CCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHHH
Confidence 9999999998653 4689999999999999999999999999996 34568899
Q ss_pred HHHHHHHHHcCCccEEEeCCCCHHHHHHHHhcC----CeeEEeeccCcccccccchHHHHHHHhCCeEEecccCcccc
Q 026625 145 IGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (235)
Q Consensus 145 ~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 218 (235)
|++|++|+++|+||+||||||+.++++++++.. +++++|++||++.+ +.+++++|+++||++++||||++|.
T Consensus 142 ~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~ 217 (316)
T 3o3r_A 142 WEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLT--QEKLIQYCHSKGIAVIAYSPLGSPD 217 (316)
T ss_dssp HHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBC--CHHHHHHHHTTTCEEEEECTTCCTT
T ss_pred HHHHHHHHHcCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccc--hHHHHHHHHHcCCEEEEecccCCCC
Confidence 999999999999999999999999999998753 48999999999887 4789999999999999999999993
|
| >1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-48 Score=331.60 Aligned_cols=187 Identities=26% Similarity=0.415 Sum_probs=170.6
Q ss_pred CceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------CCC
Q 026625 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (235)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~~R 83 (235)
++++| ++|++||+||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|+. .+|
T Consensus 3 ~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R 70 (316)
T 1us0_A 3 SRILL-NNGAKMPILGLGTWKS--------PPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVKR 70 (316)
T ss_dssp SEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSCG
T ss_pred ceEEC-CCCCEECCEeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccC---CHHHHHHHHHHHHhcCCCCh
Confidence 47889 8999999999999863 678999999999999999999999999 79999999986 489
Q ss_pred CCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-------------------CCCHHHH
Q 026625 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIEET 144 (235)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~~~~ 144 (235)
++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..++.++
T Consensus 71 ~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 141 (316)
T 1us0_A 71 EELFIVSKLWCTY---------HEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDT 141 (316)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHH
T ss_pred hHeEEEEeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHHH
Confidence 9999999997543 56899999999999999999999999999963 2367899
Q ss_pred HHHHHHHHHcCCccEEEeCCCCHHHHHHHHhcC----CeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccC
Q 026625 145 IGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219 (235)
Q Consensus 145 ~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 219 (235)
|++|++|+++|+||+||||||+.++++++++.. +|+++|++||++.+. .+++++|+++||++++||||++|.|
T Consensus 142 ~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l 218 (316)
T 1us0_A 142 WAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ--EKLIQYCQSKGIVVTAYSPLGSPDR 218 (316)
T ss_dssp HHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCTTC
T ss_pred HHHHHHHHHCCCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCC--HHHHHHHHHcCCEEEEecccccCcc
Confidence 999999999999999999999999999998763 569999999999874 6899999999999999999999987
|
| >1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-48 Score=328.80 Aligned_cols=185 Identities=26% Similarity=0.375 Sum_probs=169.2
Q ss_pred CceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------CCC
Q 026625 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (235)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~~R 83 (235)
+.+.+|++|++||+||||||+++ .+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|
T Consensus 15 ~~~~~~~tg~~v~~lglGt~~~~--------~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R 83 (298)
T 1vp5_A 15 VPKVTLNNGVEMPILGYGVFQIP--------PEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIVRR 83 (298)
T ss_dssp CCEEECTTSCEEESBCEECTTCC--------HHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCG
T ss_pred CceEeCCCCCCccCeeEeCCcCC--------hHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHhhhccCCCh
Confidence 46778899999999999999753 47899999999999999999999999 79999999985 479
Q ss_pred CCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeC
Q 026625 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (235)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS 163 (235)
++++|+||++... .+++.+++++++||++||+||||+|++|||+. +..++|++|++|+++|+||+||||
T Consensus 84 ~~v~I~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~--~~~e~~~al~~l~~~Gkir~iGvS 152 (298)
T 1vp5_A 84 EELFVTTKLWVSD---------VGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVS 152 (298)
T ss_dssp GGCEEEEEECGGG---------CSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred hhEEEEeccCCCC---------CCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC--CHHHHHHHHHHHHHcCCccEEEec
Confidence 9999999997532 46899999999999999999999999999976 788999999999999999999999
Q ss_pred CCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCcccc
Q 026625 164 EASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (235)
Q Consensus 164 n~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 218 (235)
||++++++++++. .+|+++|++||++++. .+++++|+++||++++||||++|.
T Consensus 153 n~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~ 207 (298)
T 1vp5_A 153 NFYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPEAWGPFAEGR 207 (298)
T ss_dssp SCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGG
T ss_pred CCCHHHHHHHHHhCCCCceEEEEecccccCC--HHHHHHHHHCCCEEEEecccccCC
Confidence 9999999999876 4569999999999985 689999999999999999999983
|
| >3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-48 Score=330.15 Aligned_cols=192 Identities=25% Similarity=0.411 Sum_probs=172.7
Q ss_pred CceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------CCC
Q 026625 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (235)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~~R 83 (235)
.+++| ++|++||.||||||+++ +.+++.++|+.|+++|||+||||+.|| +|+.+|++++. ++|
T Consensus 41 ~~~TL-n~G~~ip~lGlGt~~~~-------d~~e~~~~v~~Al~~Gi~~~DTA~~Yg---nE~~vG~~l~~~~~~~~i~r 109 (314)
T 3b3d_A 41 AKATL-HNGVEMPWFGLGVFQVE-------EGSELVNAVKTAIVHGYRSIDTAAIYG---NEAGVGEGIREGIEEAGISR 109 (314)
T ss_dssp CEEEC-TTSCEEESBCEECCSCC-------CSHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHHTCCG
T ss_pred CcEEC-CCcCcccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHHHHHHhCCCc
Confidence 47889 89999999999999864 347889999999999999999999999 89999999875 689
Q ss_pred CCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeC
Q 026625 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (235)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS 163 (235)
++++|.+|.+... .+++.+++++++||++||+||||+|++|+|++ ....+.|++|++|+++||||+||||
T Consensus 110 ~~~~i~~k~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~-~~~~e~~~al~~l~~~Gkir~iGvS 179 (314)
T 3b3d_A 110 EDLFITSKVWNAD---------LGYEETLAAFETSLSKLGLDYLDLYLIHWPVE-GKYKEAWRALETLYKEGRIKAIGVS 179 (314)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESSCCT-TTHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred ccccccccCcCCC---------CCHHHHHHHHHHHHHHhCCCcccccccccccc-cchhHHHHHHHHHHHCCCEeEEEec
Confidence 9999999987654 57899999999999999999999999999976 4567999999999999999999999
Q ss_pred CCCHHHHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCC
Q 026625 164 EASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (235)
Q Consensus 164 n~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 222 (235)
||+.++++++.+..++..+|++||+..+..+.+++++|+++||++++|+||++|.|+++
T Consensus 180 n~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~G~L~~~ 238 (314)
T 3b3d_A 180 NFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQLLDH 238 (314)
T ss_dssp SCCHHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGGGTTTTC
T ss_pred CCchHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEEEEeccccCCcccCc
Confidence 99999999999886665566666666666678999999999999999999999999986
|
| >3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-48 Score=332.88 Aligned_cols=184 Identities=27% Similarity=0.415 Sum_probs=167.0
Q ss_pred CCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------
Q 026625 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (235)
Q Consensus 7 ~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------ 80 (235)
.+|++++| ++|++||+||||||+ ++.++|+.|++.|||+||||+.|| +|+.+|++|++
T Consensus 23 ~~m~~~~L-~tg~~vs~lglGt~~------------~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~ 86 (331)
T 3h7r_A 23 APIRFFEL-NTGAKLPCVGLGTYA------------MVATAIEQAIKIGYRHIDCASIYG---NEKEIGGVLKKLIGDGF 86 (331)
T ss_dssp --CCEEEC-TTSCEEESBEEECTT------------CCHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTS
T ss_pred cCCcEEEC-CCCCEecCEeeccHH------------HHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHhhcCC
Confidence 47899999 799999999999985 457999999999999999999999 89999999986
Q ss_pred CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC--------------CCCHHHHHH
Q 026625 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------SVPIEETIG 146 (235)
Q Consensus 81 ~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~--------------~~~~~~~~~ 146 (235)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..++.++|+
T Consensus 87 ~~R~~v~I~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~ 157 (331)
T 3h7r_A 87 VKREELFITSKLWSND---------HLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWK 157 (331)
T ss_dssp SCGGGCEEEEEECGGG---------CSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSCCGGGEECCCHHHHHH
T ss_pred CCchhEEEEEeeCCCC---------CCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccccccccccCCHHHHHH
Confidence 3899999999997643 46789999999999999999999999999964 246789999
Q ss_pred HHHHHHHcCCccEEEeCCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccc
Q 026625 147 EMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 147 ~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G 217 (235)
+|++|+++||||+||||||+.++++++++. .+++++|++||++.+. .+++++|+++||++++|+||++|
T Consensus 158 aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~g 228 (331)
T 3h7r_A 158 AMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ--QGLHELCKSKGVHLSGYSPLGSQ 228 (331)
T ss_dssp HHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCS
T ss_pred HHHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCC--HHHHHHHHHCCCEEEEeCCCCCC
Confidence 999999999999999999999999999876 4689999999999884 68999999999999999999976
|
| >2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-47 Score=327.89 Aligned_cols=185 Identities=30% Similarity=0.469 Sum_probs=167.5
Q ss_pred C-CceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHH-cCCCeEeCCCCCCCCcHHHHHHHHHhc-----C
Q 026625 9 V-PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKE-----L 81 (235)
Q Consensus 9 m-~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~sE~~lG~al~~-----~ 81 (235)
| ++++| ++|++||+||||||+. + +++.++|+.|++ .|||+||||+.|| +|+.+|++|+. .
T Consensus 36 m~~~~~L-~tg~~vp~lglGt~~~--------~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 102 (344)
T 2bgs_A 36 EQDHFVL-KSGHAMPAVGLGTWRA--------G-SDTAHSVRTAITEAGYRHVDTAAEYG---VEKEVGKGLKAAMEAGI 102 (344)
T ss_dssp -CCEEEC-TTSCEEESBCEECTTC--------G-GGHHHHHHHHHHTTCCCEEECCGGGT---CHHHHHHHHHHHHHTTC
T ss_pred CCceEEC-CCCCccCCeeEeCCCC--------c-HHHHHHHHHHHHhcCCCEEECCCccC---CHHHHHHHHHHhhhcCC
Confidence 6 48899 7999999999999862 4 778999999999 9999999999999 79999999986 5
Q ss_pred CCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC---------------CCCHHHHHH
Q 026625 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT---------------SVPIEETIG 146 (235)
Q Consensus 82 ~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~---------------~~~~~~~~~ 146 (235)
+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..++.++|+
T Consensus 103 ~R~~v~I~TK~~~~~---------~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~~~e~~~ 173 (344)
T 2bgs_A 103 DRKDLFVTSKIWCTN---------LAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWK 173 (344)
T ss_dssp CGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCCHHHHHH
T ss_pred CcccEEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccccccccCCCHHHHHH
Confidence 899999999997543 56899999999999999999999999999963 236789999
Q ss_pred HHHHHHHcCCccEEEeCCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccc
Q 026625 147 EMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 147 ~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G 217 (235)
+|++|+++|+||+||||||+.++++++++. .+++++|++||++.+. .+++++|+++||++++||||++|
T Consensus 174 aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~--~~ll~~~~~~gI~v~a~spL~~G 244 (344)
T 2bgs_A 174 EMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN--DKIFEACKKHGIHITAYSPLGSS 244 (344)
T ss_dssp HHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCTT
T ss_pred HHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCc--HHHHHHHHHCCCEEEEeCcccCC
Confidence 999999999999999999999999999876 4579999999999874 68999999999999999999998
|
| >4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=322.71 Aligned_cols=193 Identities=31% Similarity=0.462 Sum_probs=174.1
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-------C
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-------L 81 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-------~ 81 (235)
.+++.| +||++||.||||||++ +++++.++|+.|+++|||+||||+.|| +|+.+|++|++ .
T Consensus 2 ~~~v~L-ntG~~vp~iGlGtw~~--------~~~~a~~~i~~Al~~Gin~~DTA~~Yg---sE~~vG~al~~~~~~~~~~ 69 (324)
T 4gac_A 2 ASSVLL-HTGQKMPLIGLGTWKS--------EPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKAV 69 (324)
T ss_dssp CCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHBSTTSSB
T ss_pred CCeEEC-CCCCEeccceeECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhhhccccee
Confidence 467888 9999999999999863 678999999999999999999999999 89999999986 4
Q ss_pred CCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-------------------CCCHH
Q 026625 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIE 142 (235)
Q Consensus 82 ~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~~ 142 (235)
.|+++++++|.+... .+++.+++++++||++||+||||+|++|||+. ..+++
T Consensus 70 ~r~~~~~~~~~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (324)
T 4gac_A 70 PREELFVTSKLWNTK---------HHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYK 140 (324)
T ss_dssp CGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHH
T ss_pred cccccccccccCCCC---------CCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHH
Confidence 688999999987654 56899999999999999999999999999963 34688
Q ss_pred HHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCC
Q 026625 143 ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220 (235)
Q Consensus 143 ~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~ 220 (235)
++|++|++|+++||||+||||||+.++++++... ..+.++|++||+... +.+++++|+++||++++||||++|.++
T Consensus 141 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a~spL~~g~~~ 218 (324)
T 4gac_A 141 ETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLA--QNELIAHCHARGLEVTAYSPLGSSDRA 218 (324)
T ss_dssp HHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTCCGGGG
T ss_pred HHHHHHHHHHHCCCeeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhh--HHHHHHHHHHhceeeeecCCcccCccc
Confidence 9999999999999999999999999999998876 457899999998776 478999999999999999999999999
Q ss_pred CCCC
Q 026625 221 GKAV 224 (235)
Q Consensus 221 ~~~~ 224 (235)
++..
T Consensus 219 ~~~~ 222 (324)
T 4gac_A 219 WRHP 222 (324)
T ss_dssp GGST
T ss_pred cCCC
Confidence 8843
|
| >3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri} | Back alignment and structure |
|---|
Probab=97.88 E-value=4.6e-06 Score=78.73 Aligned_cols=99 Identities=14% Similarity=0.095 Sum_probs=74.7
Q ss_pred HHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe--CCCCH---H----------------HHHHH
Q 026625 115 CEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL--SEASP---D----------------TIRRA 173 (235)
Q Consensus 115 ~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv--Sn~~~---~----------------~l~~~ 173 (235)
++.||+.|++|++|++ +|..+.. ...++++++++...+|+|+++|+ |++.. + ...++
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~~-~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~~ 308 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNVA-GVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELKV 308 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCCH-HHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHHH
T ss_pred eeccccccCCCCceEE-EECCcCc-cHHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHHH
Confidence 5567888999999995 7644332 23578999999999999999955 43333 1 23344
Q ss_pred HhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCcc-ccC
Q 026625 174 HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGR-GFF 219 (235)
Q Consensus 174 ~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~L 219 (235)
++...++++++.||-..+ ++++.|.++|++|++.+|.++ |.+
T Consensus 309 i~tGa~dv~vV~~n~i~~----~ll~~a~~~Gm~Vit~sp~~~~Grp 351 (807)
T 3cf4_A 309 IRSGMPDVIVVDEQCVRG----DIVPEAQKLKIPVIASNPKIMYGLP 351 (807)
T ss_dssp HHHTCCSEEEECSSSCCT----THHHHHHHTTCCEEECSTTCCTTCC
T ss_pred hhcCCCeEEEEEecCCCh----HHHHHHHHCCCEEEEechhhhcCCC
Confidence 556889999999987653 688999999999999999986 554
|
| >2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.57 Score=39.45 Aligned_cols=154 Identities=10% Similarity=0.063 Sum_probs=93.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+....+.+.|++.|..--........+.+ +++++. .+++.|.--... ..+.+...+-+ +.|
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v-~avr~~-g~~~~l~vDan~----------~~~~~~a~~~~-~~l 205 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAV-EEIAKV-TRGAKYIVDANM----------GYTQKEAVEFA-RAV 205 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHH-STTCEEEEECTT----------CSCHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHH-HHHHhh-CCCCeEEEECCC----------CCCHHHHHHHH-HHH
Confidence 45667777888899999998742111100112333 556554 344444322211 23455544444 347
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+.++++ ..++..|-+. +.++.+.++++.-.|--.+- +-++.++++++++....+++|+..+- -.-.+ ..+
T Consensus 206 ~~~~i~---~~~iE~P~~~----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i 277 (345)
T 2zad_A 206 YQKGID---IAVYEQPVRR----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAI 277 (345)
T ss_dssp HHTTCC---CSEEECCSCT----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHH
T ss_pred HhcCCC---eeeeeCCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHH
Confidence 777665 1145555332 34677777777655554443 55788999999988889999996554 21111 578
Q ss_pred HHHHHHhCCeEEecccC
Q 026625 198 VPLCRELGIGIVPYCPL 214 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (235)
.+.|+++|+.++..+.+
T Consensus 278 ~~~A~~~g~~~~~~~~~ 294 (345)
T 2zad_A 278 VEIAESSGLKLMIGCMG 294 (345)
T ss_dssp HHHHHTTTCEEEECCSS
T ss_pred HHHHHHcCCeEEEecCc
Confidence 99999999999988765
|
| >1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A | Back alignment and structure |
|---|
Probab=94.59 E-value=0.57 Score=39.67 Aligned_cols=151 Identities=8% Similarity=0.041 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCc--HHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT--NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~--sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 117 (235)
+.++..+....+.+.|++.|..-- |.+. ....+=+++++.-.+++-|.-+... ..+.+...+-++
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~- 210 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRI--GYPALDQDLAVVRSIRQAVGDDFGIMVDYNQ----------SLDVPAAIKRSQ- 210 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEC--CCSSHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec--CCCCHHHHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHHHHH-
Confidence 456667777888899999998521 2111 1222223444411234445444321 134555444444
Q ss_pred HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-c
Q 026625 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-N 195 (235)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~ 195 (235)
.|+.++++++ ..|-.. +.++.+.++++.-.|--++- +.++++.++++++....+++|+..+-+-.-.+ .
T Consensus 211 ~l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~ 281 (359)
T 1mdl_A 211 ALQQEGVTWI-----EEPTLQ----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWI 281 (359)
T ss_dssp HHHHHTCSCE-----ECCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHH
T ss_pred HHHHhCCCeE-----ECCCCh----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHHHHH
Confidence 4778887654 344221 35788888888766665544 44678999999998889999998765432112 6
Q ss_pred hHHHHHHHhCCeEEecc
Q 026625 196 EIVPLCRELGIGIVPYC 212 (235)
Q Consensus 196 ~l~~~~~~~gi~v~a~s 212 (235)
.+.+.|+++|+.++..+
T Consensus 282 ~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 282 RASALAQQFGIPMSSHL 298 (359)
T ss_dssp HHHHHHHHTTCCBCCBS
T ss_pred HHHHHHHHcCCeEeecc
Confidence 78999999999988764
|
| >1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=94.52 E-value=0.47 Score=40.39 Aligned_cols=154 Identities=12% Similarity=0.094 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCCCCCCCCc--HHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFS-KGITFFDTADKYGPYT--NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (235)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~--sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 116 (235)
+.++..+....+.+ .|++.|..-- |.+. .....=+++++.-.+++-|.-.... ..+.+...+-+
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~--g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~- 208 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKL--GARTPAQDLEHIRSIVKAVGDRASVRVDVNQ----------GWDEQTASIWI- 208 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEEC--SSSCHHHHHHHHHHHHHHHGGGCEEEEECTT----------CCCHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhCCccEEEEec--CCCChHHHHHHHHHHHHhcCCCCEEEEECCC----------CCCHHHHHHHH-
Confidence 45667777888888 9999988532 2111 1222233444411123444443321 13455544433
Q ss_pred HHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-
Q 026625 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE- 194 (235)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~- 194 (235)
+.|+.+++++ +..|-+. +.++.+.++++.-.|.-.+- +-++.+.++++++....+++|+..+-.-.-.+
T Consensus 209 ~~l~~~~i~~-----iEqP~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 279 (370)
T 1nu5_A 209 PRLEEAGVEL-----VEQPVPR----ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANT 279 (370)
T ss_dssp HHHHHHTCCE-----EECCSCT----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHH
T ss_pred HHHHhcCcce-----EeCCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHH
Confidence 3677777654 4445322 34777778877655544433 55788999999998889999997654332112
Q ss_pred chHHHHHHHhCCeEEecccCc
Q 026625 195 NEIVPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 195 ~~l~~~~~~~gi~v~a~spl~ 215 (235)
..+.+.|+++|+.++..+.+.
T Consensus 280 ~~i~~~A~~~g~~~~~~~~~e 300 (370)
T 1nu5_A 280 LKVAAVAEAAGISSYGGTMLD 300 (370)
T ss_dssp HHHHHHHHHHTCEEEECCSSC
T ss_pred HHHHHHHHHcCCcEEecCCcc
Confidence 678999999999999887653
|
| >2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=94.35 E-value=0.77 Score=39.27 Aligned_cols=152 Identities=11% Similarity=0.085 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCC-CcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 117 (235)
+.++..+....+.+.|++.|..- .|. -+....+=+++++ .+ ++-|.-+... ..+.+...+-+ +
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik--~g~~~~~~~e~v~avr~a~g--d~~l~vD~n~----------~~~~~~a~~~~-~ 211 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLK--VGRGEKLDLEITAAVRGEIG--DARLRLDANE----------GWSVHDAINMC-R 211 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEE--CCSCHHHHHHHHHHHHTTST--TCEEEEECTT----------CCCHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--cCCCHHHHHHHHHHHHHHcC--CcEEEEecCC----------CCCHHHHHHHH-H
Confidence 56677788888999999999852 221 0112222345555 33 5555444321 23455444433 4
Q ss_pred HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-c
Q 026625 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-N 195 (235)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~ 195 (235)
.|+.+++++|. .|-+ ...|+.+.++++.-.|--++. +-+++++++++++....+++|+..+-+-.-.+ .
T Consensus 212 ~l~~~~i~~iE-----qP~~----~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~ 282 (384)
T 2pgw_A 212 KLEKYDIEFIE-----QPTV----SWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMM 282 (384)
T ss_dssp HHGGGCCSEEE-----CCSC----TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHH
T ss_pred HHHhcCCCEEe-----CCCC----hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHH
Confidence 67777776543 4432 135777778877656665554 44678999999998889999997655432112 6
Q ss_pred hHHHHHHHhCCeEEecccCc
Q 026625 196 EIVPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 196 ~l~~~~~~~gi~v~a~spl~ 215 (235)
.+.+.|+++|+.++..+.+.
T Consensus 283 ~i~~~A~~~g~~~~~~~~~e 302 (384)
T 2pgw_A 283 KAAAVAEAAGLKICIHSSFT 302 (384)
T ss_dssp HHHHHHHHTTCCEEECCCSC
T ss_pred HHHHHHHHCCCeEeeccCcC
Confidence 78999999999998876443
|
| >3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=94.17 E-value=1.2 Score=38.20 Aligned_cols=156 Identities=10% Similarity=0.084 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+....+++. |++.|..=-.-.+-..+...=+++++.-.+++-|.-..... .+.+...+ +-+.
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~~----------~~~~~A~~-~~~~ 216 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINAR----------WDRRTALH-YLPI 216 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTTC----------SCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCC----------CCHHHHHH-HHHH
Confidence 456666777778887 99998753211111223333456665333455555554221 23443332 3356
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
|+.+++++| ..|-+. +.++.+.++++.-.|. ..|=+-++.++++++++....+++|+..+-.-.-.+ ..
T Consensus 217 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 287 (383)
T 3i4k_A 217 LAEAGVELF-----EQPTPA----DDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKK 287 (383)
T ss_dssp HHHTTCCEE-----ESCSCT----TCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHH
T ss_pred HHhcCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHH
Confidence 677776544 445332 2366677777653443 334466889999999988889999998765432212 67
Q ss_pred HHHHHHHhCCeEEecccCc
Q 026625 197 IVPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl~ 215 (235)
+...|+++|+.++..+.+.
T Consensus 288 ia~~A~~~gi~~~~~~~~e 306 (383)
T 3i4k_A 288 IAAIAEAGGLACHGATSLE 306 (383)
T ss_dssp HHHHHHHTTCEEEECCSCC
T ss_pred HHHHHHHcCCeEEeCCCCc
Confidence 8899999999998765443
|
| >2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A | Back alignment and structure |
|---|
Probab=94.12 E-value=0.54 Score=40.34 Aligned_cols=154 Identities=16% Similarity=0.145 Sum_probs=95.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+....+.+.|++.|..--.-.+-+..+.+ +++++.-.+++.|.-+... ..+.+...+-++ .|
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v-~avr~a~g~d~~l~vDan~----------~~~~~~a~~~~~-~l 231 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGPAAEI-ANLRQVLGPQAKIAADMHW----------NQTPERALELIA-EM 231 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHH-HHHHHHHCTTSEEEEECCS----------CSCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHHHHHH-HHHHHHhCCCCEEEEECCC----------CCCHHHHHHHHH-HH
Confidence 56777788888999999998742110011123333 3445411234444444321 134555544444 47
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+.+++++| ..|-.. +.++.+.++++.-.|--++. +-+++++++++++....+++|+..+- -.-.+ ..+
T Consensus 232 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i 301 (388)
T 2nql_A 232 QPFDPWFA-----EAPVWT----EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGITNFIRI 301 (388)
T ss_dssp GGGCCSCE-----ECCSCT----TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHH
T ss_pred hhcCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHH
Confidence 77777654 334221 35778888887655655544 44678999999988889999997665 32112 578
Q ss_pred HHHHHHhCCeEEecccCc
Q 026625 198 VPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (235)
.+.|+++|+.++..+.+.
T Consensus 302 ~~~A~~~g~~~~~h~~~e 319 (388)
T 2nql_A 302 GALAAEHGIDVIPHATVG 319 (388)
T ss_dssp HHHHHHHTCEECCCCCSS
T ss_pred HHHHHHcCCeEEeecCCC
Confidence 899999999998875443
|
| >2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=94.12 E-value=1.1 Score=38.72 Aligned_cols=155 Identities=10% Similarity=-0.020 Sum_probs=94.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC----CCC--------C------cHHHHHHHHHhcCCCCCEEEEeccccccCCCcc
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADK----YGP--------Y------TNEILLGKALKELPRENIQVATKFGFVELGFTS 101 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~----Yg~--------g------~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~ 101 (235)
+.++..+....+.+.|++.|..-.. +|. . +....+=+++++.-.+++.|.-....
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~------- 224 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHA------- 224 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT-------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCC-------
Confidence 6677778888899999999875321 231 0 01112222334311234555544321
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCee
Q 026625 102 VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPIT 180 (235)
Q Consensus 102 ~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~ 180 (235)
..+.+...+-++ .|+.++++++ ..|-+. +.++.+.++++.-.|--.+- +-++.+.++++++....+
T Consensus 225 ---~~~~~~a~~~~~-~l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d 291 (407)
T 2o56_A 225 ---FTDTTSAIQFGR-MIEELGIFYY-----EEPVMP----LNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLS 291 (407)
T ss_dssp ---CSCHHHHHHHHH-HHGGGCCSCE-----ECSSCS----SSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCS
T ss_pred ---CCCHHHHHHHHH-HHHhcCCCEE-----eCCCCh----hhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCC
Confidence 134555555444 4777776654 444322 34677777777655654444 445678999999888899
Q ss_pred EEeeccCccccccc-chHHHHHHHhCCeEEecccC
Q 026625 181 AVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 181 ~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~spl 214 (235)
++|+..+-.-.-.+ ..+.+.|+++|+.++..+.+
T Consensus 292 ~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 292 VIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp EECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred EEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 99998765432212 67899999999999887663
|
| >2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens} | Back alignment and structure |
|---|
Probab=94.10 E-value=0.77 Score=39.21 Aligned_cols=151 Identities=11% Similarity=-0.039 Sum_probs=91.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+....+.+.|++.|..--... -+....+=+++++.-.+++.|.-+... ..+.+...+-+ +.|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~~-~~~~~e~v~avr~a~g~d~~l~vDan~----------~~~~~~a~~~~-~~l 212 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGAD-WQSDIDRIRACLPLLEPGEKAMADANQ----------GWRVDNAIRLA-RAT 212 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHGGGSCTTCEEEEECTT----------CSCHHHHHHHH-HHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCC-HHHHHHHHHHHHHhcCCCCEEEEECCC----------CCCHHHHHHHH-HHH
Confidence 346667777888999999988521110 011222234555422335555554321 13444333322 224
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+.+ ++ ++..|-. .++.+.++++.-.|--++. +-+++++++++++....+++|+..+..-.-.+ ..+
T Consensus 213 ~~~-----~i-~iE~P~~------~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 280 (379)
T 2rdx_A 213 RDL-----DY-ILEQPCR------SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRT 280 (379)
T ss_dssp TTS-----CC-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHH
T ss_pred HhC-----Ce-EEeCCcC------CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 444 44 4554422 6788888887655655544 44678999999998889999998776533222 678
Q ss_pred HHHHHHhCCeEEecccC
Q 026625 198 VPLCRELGIGIVPYCPL 214 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (235)
.+.|+++|+.++..+.+
T Consensus 281 ~~~A~~~g~~~~~~~~~ 297 (379)
T 2rdx_A 281 RDFLIDNRMPVVAEDSW 297 (379)
T ss_dssp HHHHHHTTCCEEEECSB
T ss_pred HHHHHHcCCeEEEeecc
Confidence 99999999999887543
|
| >2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A | Back alignment and structure |
|---|
Probab=94.02 E-value=1.8 Score=36.70 Aligned_cols=153 Identities=10% Similarity=0.033 Sum_probs=92.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCC-CcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+....+.+.|++.|..--..++ ....+.+ +++++.-.+++-|.-+... ..+.+...+-++ .
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~G~d~~l~vDan~----------~~~~~~a~~~~~-~ 213 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRV-SALREHLGDSFPLMVDANM----------KWTVDGAIRAAR-A 213 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CSCHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHH-H
Confidence 5677778888889999999875321111 0122233 4455411123333333321 134555444443 4
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
|+.+++++ +..|-.. +.++.+.++++.-.|--++- +-++.++++++++....+++|+..+-+-.-.+ ..
T Consensus 214 l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 284 (371)
T 2ovl_A 214 LAPFDLHW-----IEEPTIP----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRK 284 (371)
T ss_dssp HGGGCCSE-----EECCSCT----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHH
T ss_pred HHhcCCCE-----EECCCCc----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHH
Confidence 77777654 4444322 34677777776545554443 45688999999998889999998765433222 67
Q ss_pred HHHHHHHhCCeEEeccc
Q 026625 197 IVPLCRELGIGIVPYCP 213 (235)
Q Consensus 197 l~~~~~~~gi~v~a~sp 213 (235)
+.+.|+++|+.++..+.
T Consensus 285 i~~~A~~~gi~~~~h~~ 301 (371)
T 2ovl_A 285 VAALAEANNMLLTSHGV 301 (371)
T ss_dssp HHHHHHHTTCCEEECSC
T ss_pred HHHHHHHcCCeEccccH
Confidence 89999999999987654
|
| >2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A* | Back alignment and structure |
|---|
Probab=93.91 E-value=0.58 Score=40.23 Aligned_cols=149 Identities=9% Similarity=-0.011 Sum_probs=92.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCc---HHHHHHHHHhc--CCCCCEEEEeccccccCCCcccccCCCHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT---NEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSC 114 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~---sE~~lG~al~~--~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~ 114 (235)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++ .+.-.+.| .... ..+.+...+-
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~--g~~~~~~~~e~v-~avR~avg~d~~l~v--Dan~----------~~~~~~a~~~ 226 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKV--GQPDGALDIARV-TAVRKHLGDAVPLMV--DANQ----------QWDRPTAQRM 226 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEC--CCSCHHHHHHHH-HHHHHHHCTTSCEEE--ECTT----------CCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec--CCCCHHHHHHHH-HHHHHHcCCCCEEEE--ECCC----------CCCHHHHHHH
Confidence 567777888889999999887521 2111 12333 55555 23233433 3211 2355555554
Q ss_pred HHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCcccccc
Q 026625 115 CEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDI 193 (235)
Q Consensus 115 ~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~ 193 (235)
++ .|+.+++++| ..|-+. +.++.+.++++.-.|--++. +.+++++++++++....+++|+..+-.-.-.
T Consensus 227 ~~-~l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 296 (393)
T 2og9_A 227 CR-IFEPFNLVWI-----EEPLDA----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGIT 296 (393)
T ss_dssp HH-HHGGGCCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHH
T ss_pred HH-HHHhhCCCEE-----ECCCCc----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHH
Confidence 43 4777877654 344221 34677777877655554444 4568899999999888999998765432211
Q ss_pred c-chHHHHHHHhCCeEEeccc
Q 026625 194 E-NEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 194 ~-~~l~~~~~~~gi~v~a~sp 213 (235)
+ ..+.+.|+++|+.++..+.
T Consensus 297 ~~~~i~~~A~~~gi~~~~h~~ 317 (393)
T 2og9_A 297 PFLKIASLAEHAGLMLAPHFA 317 (393)
T ss_dssp HHHHHHHHHHHTTCEECCCSC
T ss_pred HHHHHHHHHHHcCCEEeccCc
Confidence 2 6789999999999976553
|
| >3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A* | Back alignment and structure |
|---|
Probab=93.81 E-value=1.3 Score=37.97 Aligned_cols=156 Identities=8% Similarity=0.010 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEE-eccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVA-TKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~-tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+..+.+++.|++.|..=-... -..+...=+++++.-.+++-|. -.... ..+.+...+ +-+.
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~-~~~d~~~v~avR~a~g~~~~l~~vDan~----------~~~~~~A~~-~~~~ 209 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKN-LDADEEFLSRVKEEFGSRVRIKSYDFSH----------LLNWKDAHR-AIKR 209 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSC-HHHHHHHHHHHHHHHGGGCEEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCC-HHHHHHHHHHHHHHcCCCCcEEEecCCC----------CcCHHHHHH-HHHH
Confidence 567777888889999999987532111 1122223345554111233333 33211 123433332 2335
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
|+.+++ ++.++..|-.. +.++.+.++++.-.|.- |=|-++.++++++++...++++|+..+-.-.-.+ ..+
T Consensus 210 l~~~~i---~~~~iEqP~~~----~d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 210 LTKYDL---GLEMIESPAPR----NDFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp HTTCCS---SCCEEECCSCT----TCHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHhcCC---CcceecCCCCh----hhHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 555553 33566666432 23677888888766665 8889999999999988889999997655432112 678
Q ss_pred HHHHHHhCCeEEecccCc
Q 026625 198 VPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (235)
...|+++|+.++..+.+.
T Consensus 282 a~~A~~~gi~~~~~~~~e 299 (391)
T 3gd6_A 282 AYAAEVASKDVVLGTTQE 299 (391)
T ss_dssp HHHHHHTTCEEEECCCCC
T ss_pred HHHHHHcCCEEEecCCCc
Confidence 999999999998766543
|
| >1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A | Back alignment and structure |
|---|
Probab=93.76 E-value=0.65 Score=39.41 Aligned_cols=157 Identities=7% Similarity=0.062 Sum_probs=92.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+....+.+.|++.|..--.-++-......=+++++.-.+++.|.-.... ..+.+...+-++ .|
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~-~l 208 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDANQ----------GWRPKEAVTAIR-KM 208 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHH-HH
Confidence 4566777778888999999885211111011122223444411124444444321 134554444443 36
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEE-eCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+..+ .++.++..|-+. +.++.+.++++.-.|.-.+ =+-++.+.+.++++....+++|+..+-.-.-.+ ..+
T Consensus 209 ~~~~---~~i~~iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 281 (366)
T 1tkk_A 209 EDAG---LGIELVEQPVHK----DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKI 281 (366)
T ss_dssp HHTT---CCEEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcC---CCceEEECCCCc----ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHH
Confidence 6611 244566666432 3467777777765554443 355788999999988889999997655432112 678
Q ss_pred HHHHHHhCCeEEecccC
Q 026625 198 VPLCRELGIGIVPYCPL 214 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (235)
.+.|+++|+.++..+.+
T Consensus 282 ~~~A~~~g~~~~~~~~~ 298 (366)
T 1tkk_A 282 NAMAEACGVECMVGSMI 298 (366)
T ss_dssp HHHHHHHTCCEEECCSS
T ss_pred HHHHHHcCCcEEecCcc
Confidence 99999999999887665
|
| >2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP} | Back alignment and structure |
|---|
Probab=93.48 E-value=0.5 Score=40.68 Aligned_cols=154 Identities=8% Similarity=0.036 Sum_probs=92.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+....+.+.|++.|..--........+.+ +++++.-.+++-|.-.... ..+.+...+-+ +.|
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v-~avR~a~g~d~~l~vDan~----------~~~~~~a~~~~-~~l 212 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMV-AEVRRAVGDDVDLFIDING----------AWTYDQALTTI-RAL 212 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CCCHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHH-HHHHHhhCCCCEEEEECCC----------CCCHHHHHHHH-HHH
Confidence 45777777888889999988752211100122333 4555411123333333211 13455544433 367
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+.+++++| ..|-+. +.++.+.++++.-.|--.+- +.++.++++++++....+++|+..+-.-.-.+ ..+
T Consensus 213 ~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 283 (397)
T 2qde_A 213 EKYNLSKI-----EQPLPA----WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRW 283 (397)
T ss_dssp GGGCCSCE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhCCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 77776654 444322 34777788877655554433 45788999999988889999997655432112 678
Q ss_pred HHHHHHhCCeEEecccC
Q 026625 198 VPLCRELGIGIVPYCPL 214 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (235)
.+.|+++|+.++..+-+
T Consensus 284 ~~~A~~~g~~~~~~~~~ 300 (397)
T 2qde_A 284 LTLARLANLPVICGCMV 300 (397)
T ss_dssp HHHHHHHTCCEEECCCS
T ss_pred HHHHHHcCCeEEEecCc
Confidence 99999999999988543
|
| >3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779} | Back alignment and structure |
|---|
Probab=93.44 E-value=2.5 Score=35.86 Aligned_cols=156 Identities=13% Similarity=0.103 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+.++.+++.|++.|-.=-.-.+-..+...=+++++ .+.-++.|=..-+ .+.+... +.
T Consensus 143 ~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~~~~~l~vDaN~~------------~~~~~A~----~~ 206 (365)
T 3ik4_A 143 DEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAAPTAPLIVDGNCG------------YDVERAL----AF 206 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHSSSCCEEEECTTC------------CCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhCCCCeEEEECCCC------------CCHHHHH----HH
Confidence 56777888888999999987543211100122333345555 4433443333222 2333322 22
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
+++|..+..++.++..|-+.. .++.+.++.++-.|. ..|=|.++..++.++++...++++|+..+- -.-.+ ..
T Consensus 207 ~~~L~~~~~~i~~iEeP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~ 281 (365)
T 3ik4_A 207 CAACKAESIPMVLFEQPLPRE----DWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVINIKLMK-AGVAEGLK 281 (365)
T ss_dssp HHHHHHTTCCEEEEECCSCTT----CHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHH
T ss_pred HHHHhhCCCCceEEECCCCcc----cHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHH
Confidence 334411235788888775432 366777777764443 445577889999999988889999998765 22111 67
Q ss_pred HHHHHHHhCCeEEecccCcc
Q 026625 197 IVPLCRELGIGIVPYCPLGR 216 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl~~ 216 (235)
+.+.|+++|+.++..+.+..
T Consensus 282 i~~~A~~~gi~~~~~~~~es 301 (365)
T 3ik4_A 282 MIAIAQAAGLGLMIGGMVES 301 (365)
T ss_dssp HHHHHHHHTCEEEECCSSCC
T ss_pred HHHHHHHcCCeEEecCCccc
Confidence 89999999999998876643
|
| >1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A | Back alignment and structure |
|---|
Probab=93.43 E-value=0.59 Score=39.83 Aligned_cols=147 Identities=14% Similarity=0.132 Sum_probs=89.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+....+.+.|++.|..=- +.....+.+ +++++ . +++-|.-.... ..+.+. .+-++ .
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~--~~~~l~vDan~----------~~~~~~-~~~~~-~ 210 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKI--KPGWDVQPV-RATREAF--PDIRLTVDANS----------AYTLAD-AGRLR-Q 210 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC--TTSCEEEECTT----------CCCGGG-HHHHH-T
T ss_pred CHHHHHHHHHHHHHhcccEEEEec--ChHHHHHHH-HHHHHHc--CCCeEEEeCCC----------CCCHHH-HHHHH-H
Confidence 456677788888999999886421 222233444 55665 4 44444444321 123444 33333 3
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
|+.+++++| ..|-+. +.++.+.+++++-.|--. |=+-++.++++++++....+++|+..+-.-.-.+ ..
T Consensus 211 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 281 (375)
T 1r0m_A 211 LDEYDLTYI-----EQPLAW----DDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRR 281 (375)
T ss_dssp TGGGCCSCE-----ECCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHH
T ss_pred HHhCCCcEE-----ECCCCc----ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHH
Confidence 566665544 455322 346667777766444433 3355788999999988889999997765433212 67
Q ss_pred HHHHHHHhCCeEEecc
Q 026625 197 IVPLCRELGIGIVPYC 212 (235)
Q Consensus 197 l~~~~~~~gi~v~a~s 212 (235)
+.+.|+++|+.++.-+
T Consensus 282 i~~~A~~~g~~~~~~~ 297 (375)
T 1r0m_A 282 VHDVAQSFGAPVWCGG 297 (375)
T ss_dssp HHHHHHHTTCCEEECC
T ss_pred HHHHHHHcCCcEEecC
Confidence 8999999999965443
|
| >2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample} | Back alignment and structure |
|---|
Probab=93.29 E-value=3.5 Score=35.25 Aligned_cols=154 Identities=12% Similarity=0.108 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+....+.+.|++.|..-.....-+....+=+++++.-.+++.|.-+... ..+.+...+-++ .|
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~-~l 217 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDLAV----------PEDLDQTKSFLK-EV 217 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEECCC----------CSCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEcCC----------CCCHHHHHHHHH-HH
Confidence 5677778888899999999875321110011122223444411123333333321 134555444443 37
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+.+++++ +..|-+. +.++.+.++++.-.|--++. +-++++.++++++....+++|+..+-.-.-.+ ..+
T Consensus 218 ~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 288 (391)
T 2qgy_A 218 SSFNPYW-----IEEPVDG----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEI 288 (391)
T ss_dssp GGGCCSE-----EECSSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHH
T ss_pred HhcCCCe-----EeCCCCh----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHH
Confidence 7777654 3444322 34777788877655654444 45678999999988889999997765433222 678
Q ss_pred HHHHHHhCCeEEeccc
Q 026625 198 VPLCRELGIGIVPYCP 213 (235)
Q Consensus 198 ~~~~~~~gi~v~a~sp 213 (235)
.+.|+++|+.++..+.
T Consensus 289 ~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 289 SNEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHHHTTCEECCBCC
T ss_pred HHHHHHCCCEEeccCC
Confidence 9999999999988765
|
| >2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A* | Back alignment and structure |
|---|
Probab=93.21 E-value=0.87 Score=39.22 Aligned_cols=151 Identities=11% Similarity=0.001 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCc---HHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT---NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~---sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 116 (235)
+.++..+....+.+.|++.|..- -|.+. ..+.+ +++++.-.+++.|.-.... ..+.+...+-++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik--~g~~~~~~d~e~v-~avR~avG~d~~l~vDan~----------~~~~~~ai~~~~ 241 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLK--VGQPNCAEDIRRL-TAVREALGDEFPLMVDANQ----------QWDRETAIRMGR 241 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEE--CCCSCHHHHHHHH-HHHHHHHCSSSCEEEECTT----------CSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEe--cCCCCHHHHHHHH-HHHHHHcCCCCeEEEECCC----------CCCHHHHHHHHH
Confidence 56777788888999999998752 12111 22333 4555411123333333211 134555554444
Q ss_pred HHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-
Q 026625 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE- 194 (235)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~- 194 (235)
.|+.+++++| ..|-+. +.++.+.++++.-.|--.+- +.++.++++++++....+++|+..+-.-.-.+
T Consensus 242 -~l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~ 311 (398)
T 2pp0_A 242 -KMEQFNLIWI-----EEPLDA----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPF 311 (398)
T ss_dssp -HHGGGTCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHH
T ss_pred -HHHHcCCcee-----eCCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 3777776643 444322 34777777777655554443 45688999999988889999997654322112
Q ss_pred chHHHHHHHhCCeEEeccc
Q 026625 195 NEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 195 ~~l~~~~~~~gi~v~a~sp 213 (235)
..+.+.|+++|+.++..+.
T Consensus 312 ~~i~~~A~~~gi~~~~h~~ 330 (398)
T 2pp0_A 312 LKIMDLAAKHGRKLAPHFA 330 (398)
T ss_dssp HHHHHHHHHTTCEECCCSC
T ss_pred HHHHHHHHHcCCeEeecCc
Confidence 6789999999999986553
|
| >3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A* | Back alignment and structure |
|---|
Probab=92.94 E-value=3.7 Score=34.58 Aligned_cols=154 Identities=12% Similarity=0.063 Sum_probs=94.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+..+.+++.|++.|..=-.-. ...+...=+++++.-.+++.|.-..... .+.+... +.+
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~-~~~d~~~v~avR~a~g~~~~l~vDan~~----------~~~~~a~----~~~ 203 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTG-IEADIARVKAIREAVGFDIKLRLDANQA----------WTPKDAV----KAI 203 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTTC----------SCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCC-HHHHHHHHHHHHHHcCCCCeEEEECCCC----------CCHHHHH----HHH
Confidence 567777888888999999987542111 1123333345655212344444443211 2333322 233
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+.|. ..++.++..|-... .++.+.+++++-.|.-. |=+-++.++++++++....+++|+..+-.-.-.+ ..+
T Consensus 204 ~~L~--~~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i 277 (354)
T 3jva_A 204 QALA--DYQIELVEQPVKRR----DLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKI 277 (354)
T ss_dssp HHTT--TSCEEEEECCSCTT----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHH--hcCCCEEECCCChh----hHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 4442 35677777664432 36777778776555433 3366889999999988888999997655432112 678
Q ss_pred HHHHHHhCCeEEecccC
Q 026625 198 VPLCRELGIGIVPYCPL 214 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (235)
.+.|+++|+.++..+.+
T Consensus 278 ~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 278 NQICETAGIECMIGCMA 294 (354)
T ss_dssp HHHHHHTTCEEEECCCT
T ss_pred HHHHHHcCCeEEecCCC
Confidence 99999999999887766
|
| >3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A* | Back alignment and structure |
|---|
Probab=92.92 E-value=2 Score=36.42 Aligned_cols=154 Identities=14% Similarity=0.134 Sum_probs=91.6
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+..+.+++. |++.|-.=-.......+...=+++++.-.+++-|.-.... ..+.+...+ +-+.
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~~-~~~~ 207 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNR----------GWSAAESLR-AMRE 207 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHH-HHHH
Confidence 567777888888888 9998864322211112333334555511123333333211 123333222 2234
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
|+.++++ +++.|-.. +.++.+.++++.-.|.-. |=+-++.++++++++....+++|+..+-. .-.+ ..
T Consensus 208 l~~~~i~-----~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~ 277 (367)
T 3dg3_A 208 MADLDLL-----FAEELCPA----DDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIKTART-GFTGSTR 277 (367)
T ss_dssp TTTSCCS-----CEESCSCT----TSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH-TTHHHHH
T ss_pred HHHhCCC-----EEECCCCc----ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh-hHHHHHH
Confidence 4455544 45555332 236677778776555433 44667899999999888899999987665 3222 67
Q ss_pred HHHHHHHhCCeEEecccC
Q 026625 197 IVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl 214 (235)
+...|+++|+.++..+.+
T Consensus 278 ia~~A~~~gi~~~~~~~~ 295 (367)
T 3dg3_A 278 VHHLAEGLGLDMVMGNQI 295 (367)
T ss_dssp HHHHHHHHTCEEEECCSS
T ss_pred HHHHHHHcCCeEEECCcC
Confidence 899999999999976544
|
| >2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis} | Back alignment and structure |
|---|
Probab=92.75 E-value=3.7 Score=35.18 Aligned_cols=155 Identities=8% Similarity=0.019 Sum_probs=93.2
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCC----CCC--------C------cHHHHHHHHHhcCCCCCEEEEeccccccCCCc
Q 026625 39 LSEEDGISIIKHAFSKGITFFDTADK----YGP--------Y------TNEILLGKALKELPRENIQVATKFGFVELGFT 100 (235)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~~----Yg~--------g------~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~ 100 (235)
.+.++..+....+.+.|++.|..-.. +|. . +....+=+++++.-.+++.|.-....
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~------ 218 (403)
T 2ox4_A 145 GRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHG------ 218 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCC------
Confidence 36677778888899999999875321 231 0 00111222333311234555544321
Q ss_pred ccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCe
Q 026625 101 SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPI 179 (235)
Q Consensus 101 ~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~ 179 (235)
..+.+...+-++ .|+.++ +.++..|-+. +.++.+.++++.-.|--.+- +-++.+.++++++....
T Consensus 219 ----~~~~~~ai~~~~-~l~~~~-----i~~iE~P~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 284 (403)
T 2ox4_A 219 ----HTDLVSAIQFAK-AIEEFN-----IFFYEEINTP----LNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSI 284 (403)
T ss_dssp ----CSCHHHHHHHHH-HHGGGC-----EEEEECCSCT----TSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCC
T ss_pred ----CCCHHHHHHHHH-HHHhhC-----CCEEeCCCCh----hhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCC
Confidence 134554444443 355554 4556665332 34777788887766665554 34567899999988888
Q ss_pred eEEeeccCccccccc-chHHHHHHHhCCeEEeccc
Q 026625 180 TAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 180 ~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~sp 213 (235)
+++|+..+-.-.-.+ ..+.+.|+++|+.++..+.
T Consensus 285 d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~ 319 (403)
T 2ox4_A 285 DVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVA 319 (403)
T ss_dssp SEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCC
T ss_pred CEEecCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 999987654332112 6789999999999988766
|
| >2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A* | Back alignment and structure |
|---|
Probab=92.68 E-value=4.4 Score=34.77 Aligned_cols=154 Identities=10% Similarity=0.025 Sum_probs=92.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC----CCC------------Cc----H---HHHHHHHHhcCCCCCEEEEecccccc
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADK----YGP------------YT----N---EILLGKALKELPRENIQVATKFGFVE 96 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~----Yg~------------g~----s---E~~lG~al~~~~R~~~~I~tK~~~~~ 96 (235)
+.++..+....+.+.|++.|..-.. +|. |. . ...+=+++++.-.+++-|.-....
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~-- 227 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHS-- 227 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCC--
Confidence 6677788888899999999874321 221 11 0 112222334311234444444321
Q ss_pred CCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHh
Q 026625 97 LGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHA 175 (235)
Q Consensus 97 ~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~ 175 (235)
..+.+...+-++ .|+.+ ++.++..|-+. +.++.+.++++.-.|--.+. +.++.++++++++
T Consensus 228 --------~~~~~~ai~~~~-~l~~~-----~i~~iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 289 (410)
T 2gl5_A 228 --------LLGTNSAIQFAK-AIEKY-----RIFLYEEPIHP----LNSDNMQKVSRSTTIPIATGERSYTRWGYRELLE 289 (410)
T ss_dssp --------CSCHHHHHHHHH-HHGGG-----CEEEEECSSCS----SCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHH
T ss_pred --------CCCHHHHHHHHH-HHHhc-----CCCeEECCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHH
Confidence 134544444343 25554 44566666432 34677777777655654444 4467899999998
Q ss_pred cCCeeEEeeccCccccccc-chHHHHHHHhCCeEEeccc
Q 026625 176 VHPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 176 ~~~~~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~sp 213 (235)
....+++|+..+-.-.-.+ ..+.+.|+++|+.++..+.
T Consensus 290 ~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 290 KQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp TTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred cCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 8889999998765432212 6789999999999988766
|
| >2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40} | Back alignment and structure |
|---|
Probab=92.57 E-value=1.2 Score=37.73 Aligned_cols=154 Identities=16% Similarity=-0.002 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+....+.+.|++.|..--. ++-+....+=+++++.-.+++-|.-+... ..+.+... +.+
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g-~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~----~~~ 210 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKIS-GEPVTDAKRITAALANQQPDEFFIVDANG----------KLSVETAL----RLL 210 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECC-SCHHHHHHHHHHHTTTCCTTCEEEEECTT----------BCCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHhChheEEeecC-CCHHHHHHHHHHHHHhcCCCCEEEEECCC----------CcCHHHHH----HHH
Confidence 5677777888889999999874211 11011222223444422335555554421 12443332 233
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+.|- +..++ ++..|-. .++.+.++++.-.|--.+. +-+++++++++++....+++|+..+-.-.-.+ ..+
T Consensus 211 ~~l~-~~~~i-~iE~P~~------~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 282 (371)
T 2ps2_A 211 RLLP-HGLDF-ALEAPCA------TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQ 282 (371)
T ss_dssp HHSC-TTCCC-EEECCBS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHH
T ss_pred HHHH-hhcCC-cCcCCcC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHH
Confidence 4441 12345 5665532 5778888887655654444 44688999999988889999997655432112 578
Q ss_pred HHHHHHhCCeEEecccCcc
Q 026625 198 VPLCRELGIGIVPYCPLGR 216 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~ 216 (235)
.+.|+++|+.++..+.+..
T Consensus 283 ~~~A~~~g~~~~~~~~~es 301 (371)
T 2ps2_A 283 RDICLAAGYSVSVQETCGS 301 (371)
T ss_dssp HHHHHHHTCEEEEECSSCC
T ss_pred HHHHHHcCCeEEecCCCcC
Confidence 8999999999988765543
|
| >3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} | Back alignment and structure |
|---|
Probab=92.53 E-value=1.7 Score=37.12 Aligned_cols=151 Identities=8% Similarity=-0.019 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+.++.+.+.|++.|+.=-.-. -..+...=+++++.-.+++-|.-+.... .+.+...+ +-+.|
T Consensus 145 ~~e~~~~~a~~~~~~G~~~iKiK~G~~-~~~d~~~v~avR~a~g~~~~l~vDan~~----------~~~~~a~~-~~~~l 212 (378)
T 3eez_A 145 SVEETRAVIDRYRQRGYVAHSVKIGGD-VERDIARIRDVEDIREPGEIVLYDVNRG----------WTRQQALR-VMRAT 212 (378)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHTTSCCTTCEEEEECTTC----------CCHHHHHH-HHHHT
T ss_pred CHHHHHHHHHHHHhCCCCEEEeccCCC-HHHHHHHHHHHHHHcCCCceEEEECCCC----------CCHHHHHH-HHHHh
Confidence 567778888889999999998642211 0122233345555223455555554322 23443322 22334
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cchH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~l 197 (235)
+.+ ++ ++..|-. .++.+.++++.-.|.-. |=+-++.++++++++...++++|+..+-.-.-. -..+
T Consensus 213 ~~~-----~i-~iEqP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 213 EDL-----HV-MFEQPGE------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARM 280 (378)
T ss_dssp GGG-----TC-CEECCSS------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHH
T ss_pred ccC-----Ce-EEecCCC------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHH
Confidence 444 44 5555532 46777888776555433 346688999999999888999999765543211 2678
Q ss_pred HHHHHHhCCeEEecccC
Q 026625 198 VPLCRELGIGIVPYCPL 214 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (235)
...|+++|+.+...+.+
T Consensus 281 a~~A~~~g~~~~~~~~~ 297 (378)
T 3eez_A 281 RDIALTHGIDMFVMATG 297 (378)
T ss_dssp HHHHHHTTCEEEEECSS
T ss_pred HHHHHHcCCEEEcCCCC
Confidence 99999999999865444
|
| >3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=92.49 E-value=3.2 Score=36.06 Aligned_cols=149 Identities=8% Similarity=0.029 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHH
Q 026625 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (235)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 121 (235)
++..+....+.+.|++.|..--........+.+ +++++.-.+++.|.-.... ..+.+...+-++ .|+.
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~avG~d~~l~vDan~----------~~~~~eai~~~~-~L~~ 254 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGDAARVDIERV-RHVRKVLGDEVDILTDANT----------AYTMADARRVLP-VLAE 254 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------CCCHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH-HHHHHhcCCCCEEEEECCC----------CCCHHHHHHHHH-HHHh
Confidence 566677788889999988752111100122333 4555411224444433211 235555555444 4788
Q ss_pred cCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCC-ccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-chHH
Q 026625 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEIV 198 (235)
Q Consensus 122 Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l~ 198 (235)
+++++| ..|-+. +.++.+.+++++-. |--.+. +-++.++++++++....+++|+..+-.-.-.+ ..+.
T Consensus 255 ~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia 325 (428)
T 3bjs_A 255 IQAGWL-----EEPFAC----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIA 325 (428)
T ss_dssp TTCSCE-----ECCSCT----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHH
T ss_pred cCCCEE-----ECCCCc----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHH
Confidence 877654 444322 34777777776543 443433 55788999999998889999998765433222 6789
Q ss_pred HHHHHhCCeEEec
Q 026625 199 PLCRELGIGIVPY 211 (235)
Q Consensus 199 ~~~~~~gi~v~a~ 211 (235)
+.|+++|+.++..
T Consensus 326 ~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 326 AMASAYRIPINAH 338 (428)
T ss_dssp HHHHHTTCCBCCB
T ss_pred HHHHHcCCeEEec
Confidence 9999999988766
|
| >3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A | Back alignment and structure |
|---|
Probab=92.45 E-value=2.2 Score=36.28 Aligned_cols=156 Identities=10% Similarity=0.006 Sum_probs=95.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+.++.+++.|++.|-.=-... ...+...=+++++.-.+++-|.-.... ..+.+...+ +-+.|
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~-~~~d~~~v~avR~~~g~~~~l~vDaN~----------~~~~~~A~~-~~~~l 207 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGS-KELDVERIRMIREAAGDSITLRIDANQ----------GWSVETAIE-TLTLL 207 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCSSSEEEEECTT----------CBCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCC-HHHHHHHHHHHHHHhCCCCeEEEECCC----------CCChHHHHH-HHHHH
Confidence 567777888888999999986432111 123333334555511233333333221 123443332 33456
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+.+++++|+ .|-+. +.++.+.+++++-.|. ..|=|-++..+++++++....+++|+..+..-.-.+ ..+
T Consensus 208 ~~~~i~~iE-----qP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 278 (368)
T 3q45_A 208 EPYNIQHCE-----EPVSR----NLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNI 278 (368)
T ss_dssp GGGCCSCEE-----CCBCG----GGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred hhcCCCEEE-----CCCCh----hHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHH
Confidence 666665543 34221 3467777887765454 334466889999999998889999998765433212 678
Q ss_pred HHHHHHhCCeEEecccCcc
Q 026625 198 VPLCRELGIGIVPYCPLGR 216 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~ 216 (235)
.+.|+++|+.++..+.+..
T Consensus 279 ~~~A~~~gi~~~~~~~~es 297 (368)
T 3q45_A 279 IRLAEQAHMPVQVGGFLES 297 (368)
T ss_dssp HHHHHHTTCCEEECCSSCC
T ss_pred HHHHHHcCCcEEecCcccc
Confidence 9999999999987766543
|
| >2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=92.37 E-value=1 Score=38.25 Aligned_cols=147 Identities=15% Similarity=0.098 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+....+.+.|++.|..-- +.....+.+ +++++ . +++.|.-.... ..+.+. .+ +-+.
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~--~~~~l~vDan~----------~~~~~~-~~-~~~~ 203 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKI--KPGWDYEVL-KAVREAF--PEATLTADANS----------AYSLAN-LA-QLKR 203 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC--TTSCEEEECTT----------CCCGGG-HH-HHHG
T ss_pred CHHHHHHHHHHHHHhhhheeeeec--ChhHHHHHH-HHHHHHc--CCCeEEEecCC----------CCCHHH-HH-HHHH
Confidence 456677778888999999876421 222233444 55665 4 34333333211 123344 33 3334
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
|+.+++++ +..|-+. +.++.+.+++++-.|.-. |=+-++..+++++++....+++|+..+-.-.-.+ ..
T Consensus 204 l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 274 (369)
T 2zc8_A 204 LDELRLDY-----IEQPLAY----DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLR 274 (369)
T ss_dssp GGGGCCSC-----EECCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhCCCcE-----EECCCCc----ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHH
Confidence 66666554 4455322 335667777766445433 3355789999999988888999997654332112 67
Q ss_pred HHHHHHHhCCeEEecc
Q 026625 197 IVPLCRELGIGIVPYC 212 (235)
Q Consensus 197 l~~~~~~~gi~v~a~s 212 (235)
+.+.|+++|+.++.-+
T Consensus 275 i~~~A~~~g~~~~~~~ 290 (369)
T 2zc8_A 275 VHALAESAGIPLWMGG 290 (369)
T ss_dssp HHHHHHHTTCCEEECC
T ss_pred HHHHHHHcCCcEEecC
Confidence 8999999999965443
|
| >2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B | Back alignment and structure |
|---|
Probab=92.33 E-value=2.6 Score=35.83 Aligned_cols=149 Identities=10% Similarity=-0.018 Sum_probs=92.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCc--HHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT--NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~--sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 117 (235)
+.++..+....+.+.|++.|..-- |.+. ....+=+++++.-.+++-|.-+... ..+.+. ..+
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~----a~~ 208 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKI--GGSDPAQDIARIEAISAGLPDGHRVTFDVNR----------AWTPAI----AVE 208 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--CSSCHHHHHHHHHHHHHSCCTTCEEEEECTT----------CCCHHH----HHH
T ss_pred CHHHHHHHHHHHHHHhhhheeecC--CCCChHHHHHHHHHHHHHhCCCCEEEEeCCC----------CCCHHH----HHH
Confidence 457777788888899999998532 2111 1222233555422334555555321 123332 223
Q ss_pred HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-c
Q 026625 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-N 195 (235)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~ 195 (235)
.++.|. .++ ++..|-+ .++.+.++++.-.|--++- +-++.++++++++....+++|+..+..-.-.+ .
T Consensus 209 ~~~~l~---~~i-~iEqP~~------d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~ 278 (378)
T 2qdd_A 209 VLNSVR---ARD-WIEQPCQ------TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRAR 278 (378)
T ss_dssp HHTSCC---CCC-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHH
T ss_pred HHHHhC---CCc-EEEcCCC------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHHH
Confidence 445553 466 6665532 6788888887655554443 44678999999988889999997665432212 5
Q ss_pred hHHHHHHHhCCeEEecccC
Q 026625 196 EIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 196 ~l~~~~~~~gi~v~a~spl 214 (235)
.+.+.|+++|+.++..+.+
T Consensus 279 ~i~~~A~~~g~~~~~~~~~ 297 (378)
T 2qdd_A 279 QIRDFGVSVGWQMHIEDVG 297 (378)
T ss_dssp HHHHHHHHHTCEEEECCSS
T ss_pred HHHHHHHHcCCeEEecCCC
Confidence 7899999999999988543
|
| >2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A* | Back alignment and structure |
|---|
Probab=92.27 E-value=0.89 Score=38.60 Aligned_cols=154 Identities=11% Similarity=0.074 Sum_probs=90.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHH-HHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVR-SCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~-~~~~~s 118 (235)
+.++..+....+.+.|++.|..--... -.....+=+++++.-.+++-|.-+.... .+.+... +-++ .
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~-~~~~~e~v~avr~a~g~~~~l~vDan~~----------~~~~~a~~~~~~-~ 208 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTN-VKEDVKRIEAVRERVGNDIAIRVDVNQG----------WKNSANTLTALR-S 208 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTTT----------TBSHHHHHHHHH-T
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCC-HHHHHHHHHHHHHHhCCCCeEEEECCCC----------CCHHHHHHHHHH-H
Confidence 456677778888999999998521111 0111222234444111244444333211 2333333 3232 3
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
|+.+++++ +..|-+. +.++.+.++++.-.|--.+- +-++++.++++++....+++|+..+-.-.-.+ ..
T Consensus 209 l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 279 (369)
T 2p8b_A 209 LGHLNIDW-----IEQPVIA----DDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVK 279 (369)
T ss_dssp STTSCCSC-----EECCBCT----TCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhCCCcE-----EECCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHH
Confidence 55555543 4444322 34777888887755554443 45788999999988889999997654432112 57
Q ss_pred HHHHHHHhCCeEEecccC
Q 026625 197 IVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl 214 (235)
+.+.|+++|+.++..+.+
T Consensus 280 i~~~A~~~g~~~~~~~~~ 297 (369)
T 2p8b_A 280 LAHQAEMAGIECQVGSMV 297 (369)
T ss_dssp HHHHHHHTTCEEEECCSS
T ss_pred HHHHHHHcCCcEEecCCC
Confidence 899999999999877654
|
| >2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=92.11 E-value=5.1 Score=34.17 Aligned_cols=154 Identities=10% Similarity=0.093 Sum_probs=92.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeC--CCC----------CCCCcHHH------HHHHHHhcCCCCCEEEEeccccccCCCcc
Q 026625 40 SEEDGISIIKHAFSKGITFFDT--ADK----------YGPYTNEI------LLGKALKELPRENIQVATKFGFVELGFTS 101 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dt--A~~----------Yg~g~sE~------~lG~al~~~~R~~~~I~tK~~~~~~~~~~ 101 (235)
+.++..+....+.+.|++.|.. +.. || |..+. .+=+++++.-.+++-|.-....
T Consensus 137 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~g-g~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~------- 208 (392)
T 2poz_A 137 TPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRR-SMSAEAIELAYRRVKAVRDAAGPEIELMVDLSG------- 208 (392)
T ss_dssp SHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTT-BCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT-------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccccccccccccC-CcchhhHHHHHHHHHHHHHhcCCCCEEEEECCC-------
Confidence 5677778888899999998874 311 22 11111 1122333311234444444321
Q ss_pred cccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCee
Q 026625 102 VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPIT 180 (235)
Q Consensus 102 ~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~ 180 (235)
..+.+...+-++. |+.+ ++.++..|-+. +.++.+.++++.-.|--.+- +-++++.++++++....+
T Consensus 209 ---~~~~~~a~~~~~~-l~~~-----~i~~iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d 275 (392)
T 2poz_A 209 ---GLTTDETIRFCRK-IGEL-----DICFVEEPCDP----FDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACG 275 (392)
T ss_dssp ---CSCHHHHHHHHHH-HGGG-----CEEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCS
T ss_pred ---CCCHHHHHHHHHH-HHhc-----CCCEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCC
Confidence 1344444443333 5554 45566666432 34777777877656655544 345678999999888899
Q ss_pred EEeeccCccccccc-chHHHHHHHhCCeEEecccC
Q 026625 181 AVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 181 ~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~spl 214 (235)
++|+..+-.-.-.+ ..+.+.|+++|+.++..+.+
T Consensus 276 ~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 276 IIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp EECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred EEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 99997765433222 67899999999999887664
|
| >3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A | Back alignment and structure |
|---|
Probab=91.88 E-value=3 Score=35.69 Aligned_cols=155 Identities=8% Similarity=0.048 Sum_probs=92.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+.++.+++.|++.|-.=-...+-..+...=+++++.- +++-|.-..... .+.+...+ +-+.|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~-~~~~l~vDan~~----------~~~~~A~~-~~~~L 215 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDF-PEFRVRVDYNQG----------LEIDEAVP-RVLDV 215 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHC-TTSEEEEECTTC----------CCGGGHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhC-CCCeEEEECCCC----------CCHHHHHH-HHHHH
Confidence 4566666778888899999864321111012333334566522 555555443222 22322222 33455
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cchH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~l 197 (235)
+.+++.+| ..|-.. +.++.+.+++++-.|. ..|=|-++..++.++++...++++|+..+-.-.-. -..+
T Consensus 216 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 286 (385)
T 3i6e_A 216 AQFQPDFI-----EQPVRA----HHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTV 286 (385)
T ss_dssp HTTCCSCE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhcCCCEE-----ECCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 66665554 444332 2467788887764443 34446788999999998888899999765433211 2678
Q ss_pred HHHHHHhCCeEEecccCc
Q 026625 198 VPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (235)
.+.|+++|+.++..+.+.
T Consensus 287 ~~~A~~~gi~~~~~~~~e 304 (385)
T 3i6e_A 287 ARIAAAHGLMAYGGDMFE 304 (385)
T ss_dssp HHHHHHTTCEEEECCCSC
T ss_pred HHHHHHcCCEEEeCCCCc
Confidence 999999999998765443
|
| >3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum} | Back alignment and structure |
|---|
Probab=91.79 E-value=3.4 Score=35.37 Aligned_cols=156 Identities=15% Similarity=0.058 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+.++.+++.|++.|=.=-.-.+-..+...=+++++ .+..++.|=..- ..+.+... +.
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v~avR~~~~~~~L~vDaN~------------~w~~~~A~----~~ 207 (389)
T 3s5s_A 144 SPERAEEAARRAAAMGFRALKVKVGGRLAASDPARIEAIHAAAPGASLILDGNG------------GLTAGEAL----AL 207 (389)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHHHHHHHHCTTCEEEEECTT------------CSCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHHHHHHHhCCCCeEEEECCC------------CCCHHHHH----HH
Confidence 44667777888899999987532111100122233345555 442223222211 12333322 23
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCc-cEEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
+++|..+.+++.++..|-+.. .++.+.++.+.-.| -+.|=|.++..++.++++...++++|+..+. -.-.+ ..
T Consensus 208 ~~~L~~~~~~i~~iEeP~~~~----d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~~ 282 (389)
T 3s5s_A 208 VAHARRLGADVALLEQPVPRD----DWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK-GGIAEALD 282 (389)
T ss_dssp HHHHHHTTCEEEEEECCSCTT----CHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHHH
T ss_pred HHHHhhCCCCeEEEECCCCcc----cHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHH
Confidence 344411345888898885543 35667777665444 3556677899999999988889999998765 22111 56
Q ss_pred HHHHHHHhCCeEEecccCcc
Q 026625 197 IVPLCRELGIGIVPYCPLGR 216 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl~~ 216 (235)
+.+.|+++|+.++..+.+..
T Consensus 283 i~~~A~~~gi~~~~~~~~es 302 (389)
T 3s5s_A 283 IAAVARAAGLGLMIGGMVES 302 (389)
T ss_dssp HHHHHHHTTCEEEECCSSCC
T ss_pred HHHHHHHcCCeEEecCCccc
Confidence 88999999999998776543
|
| >1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=91.59 E-value=5.7 Score=33.68 Aligned_cols=153 Identities=10% Similarity=-0.026 Sum_probs=92.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeC--CCCC-CCC---cHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDT--ADKY-GPY---TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dt--A~~Y-g~g---~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~ 113 (235)
+.++..+....+.+.|++.|.. +..| +.. +....+=+++++.-.+++-|.-+... ..+.+...+
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~----------~~~~~~a~~ 218 (382)
T 1rvk_A 149 TPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFH----------WYSRTDALA 218 (382)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCT----------TCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHHH
Confidence 5677778888889999998874 3211 100 11112224444411224444444321 134554444
Q ss_pred HHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCC-HHHHHHHHhcCCeeEEeeccCcccc
Q 026625 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEAS-PDTIRRAHAVHPITAVQLEWSLWAR 191 (235)
Q Consensus 114 ~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~-~~~l~~~~~~~~~~~~q~~~n~~~~ 191 (235)
-+ +.|+.+++++ +..|-+. +.++.+.++++.-.|--.+- +-++ .++++++++....+++|+..+-.-.
T Consensus 219 ~~-~~l~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 288 (382)
T 1rvk_A 219 LG-RGLEKLGFDW-----IEEPMDE----QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGG 288 (382)
T ss_dssp HH-HHHHTTTCSE-----EECCSCT----TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTS
T ss_pred HH-HHHHhcCCCE-----EeCCCCh----hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCC
Confidence 44 3566666654 4555332 34777777877655554443 4567 8999999998889999997654332
Q ss_pred ccc-chHHHHHHHhCCeEEecc
Q 026625 192 DIE-NEIVPLCRELGIGIVPYC 212 (235)
Q Consensus 192 ~~~-~~l~~~~~~~gi~v~a~s 212 (235)
-.+ ..+.+.|+++|+.++..+
T Consensus 289 it~~~~i~~~A~~~g~~~~~~~ 310 (382)
T 1rvk_A 289 ITPALKTMHLAEAFGMECEVHG 310 (382)
T ss_dssp HHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHHcCCeEeecC
Confidence 112 678999999999998873
|
| >2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941} | Back alignment and structure |
|---|
Probab=91.57 E-value=3.4 Score=35.58 Aligned_cols=153 Identities=14% Similarity=0.098 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeC--CCCCCC-------Cc--------HHHHHHHHHhcCCCCCEEEEeccccccCCCccc
Q 026625 40 SEEDGISIIKHAFSKGITFFDT--ADKYGP-------YT--------NEILLGKALKELPRENIQVATKFGFVELGFTSV 102 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dt--A~~Yg~-------g~--------sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~ 102 (235)
+.++..+....+.+.|++.|.. +..||. |. ..+.+ +++++.-.+++-|.-....
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v-~avRea~G~d~~l~vDan~-------- 219 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARV-AAVREAVGPEVEVAIDMHG-------- 219 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHH-HHHHHHHCSSSEEEEECTT--------
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHH-HHHHHhcCCCCEEEEECCC--------
Confidence 4566777788889999998763 223332 11 11222 3444411234444444321
Q ss_pred ccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeE
Q 026625 103 IVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITA 181 (235)
Q Consensus 103 ~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~ 181 (235)
..+.+...+-++ .|+.++++ ++..|-+. +.++.+.++++.-.|--.+- +-++.+.++++++....++
T Consensus 220 --~~~~~~a~~~~~-~l~~~~i~-----~iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 287 (410)
T 2qq6_A 220 --RFDIPSSIRFAR-AMEPFGLL-----WLEEPTPP----ENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDY 287 (410)
T ss_dssp --CCCHHHHHHHHH-HHGGGCCS-----EEECCSCT----TCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred --CCCHHHHHHHHH-HHhhcCCC-----eEECCCCh----hhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 134555544443 37776655 44555332 34777788877655554443 4568899999998888999
Q ss_pred EeeccCccccccc-chHHHHHHHhCCeEEeccc
Q 026625 182 VQLEWSLWARDIE-NEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 182 ~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~sp 213 (235)
+|+..+-.-.-.+ ..+.+.|+++|+.++..+.
T Consensus 288 v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~ 320 (410)
T 2qq6_A 288 VMPDVAKCGGLAEAKRIANLAELDYIPFAPHNV 320 (410)
T ss_dssp ECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCC
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 9997654332112 5788999999999887766
|
| >3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A | Back alignment and structure |
|---|
Probab=91.38 E-value=3.6 Score=35.17 Aligned_cols=154 Identities=12% Similarity=-0.076 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC-C---CCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADK-Y---GPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~-Y---g~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~ 115 (235)
+.++..+.++.+.+.|++.|-.=-. + ++-..+...=+++++.-.+++-|.-..... .+.+. .
T Consensus 145 ~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~~~~L~vDaN~~----------~~~~~----A 210 (386)
T 3fv9_G 145 TPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADANNG----------LTVEH----A 210 (386)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCTTCEEEEECTTC----------CCHHH----H
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCC----------CCHHH----H
Confidence 5677788888899999998864321 0 110122222345554222445555443222 23332 2
Q ss_pred HHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc
Q 026625 116 EASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE 194 (235)
Q Consensus 116 ~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~ 194 (235)
.+.++.|. +.+++ ++..|-. .++.+.+++++-.|. ..|=|-++..++.++++...++++|+..+-.-.-.+
T Consensus 211 ~~~~~~l~-~~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~ 282 (386)
T 3fv9_G 211 LRMLSLLP-PGLDI-VLEAPCA------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITP 282 (386)
T ss_dssp HHHHHHSC-SSCCC-EEECCCS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHH
T ss_pred HHHHHHhh-ccCCc-EEecCCC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHHH
Confidence 23455663 34567 7776643 367777887764443 344467889999999988889999997655432112
Q ss_pred -chHHHHHHHhCCeEEecccCc
Q 026625 195 -NEIVPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 195 -~~l~~~~~~~gi~v~a~spl~ 215 (235)
..+.+.|+++|+.+...+.+.
T Consensus 283 ~~~i~~~A~~~gi~~~~~~~~e 304 (386)
T 3fv9_G 283 MLRQRAIAAAAGMVMSVQDTVG 304 (386)
T ss_dssp HHHHHHHHHHTTCEEEEECSSC
T ss_pred HHHHHHHHHHcCCEEEeCCCCC
Confidence 678999999999998654443
|
| >1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A* | Back alignment and structure |
|---|
Probab=90.85 E-value=3.8 Score=34.63 Aligned_cols=147 Identities=13% Similarity=0.024 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-C-CCCCEEEEeccccccCCCcccccCCCHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-L-PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~-~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 117 (235)
+.++..+....+.+.|++.|..-- +.....+.+. ++++ . +.-.+.|-... ..+.+. .+-+ +
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~--~~~~~~e~v~-avr~~~g~~~~l~vDan~------------~~~~~~-~~~~-~ 203 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPVR-AVRERFGDDVLLQVDANT------------AYTLGD-APQL-A 203 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHHH-HHHHHHCTTSEEEEECTT------------CCCGGG-HHHH-H
T ss_pred CHHHHHHHHHHHHHhCccEEEEec--CchhHHHHHH-HHHHhcCCCceEEEeccC------------CCCHHH-HHHH-H
Confidence 456677778888899999886421 2222344443 4454 2 32233332211 123444 3333 3
Q ss_pred HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-c
Q 026625 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-N 195 (235)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~ 195 (235)
.|+.++++ ++..|-+. +.++.+.+++++-.|.-.+- +-++.++++++++....+++|+..+-.-.-.+ .
T Consensus 204 ~l~~~~i~-----~iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~ 274 (368)
T 1sjd_A 204 RLDPFGLL-----LIEQPLEE----EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEAR 274 (368)
T ss_dssp TTGGGCCS-----EEECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHH
T ss_pred HHHhcCCC-----eEeCCCCh----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHH
Confidence 36666655 34555322 34777777877644543333 55788999999988889999997765433212 6
Q ss_pred hHHHHHHHhCCeEEecc
Q 026625 196 EIVPLCRELGIGIVPYC 212 (235)
Q Consensus 196 ~l~~~~~~~gi~v~a~s 212 (235)
.+.+.|+++|+.++.-+
T Consensus 275 ~i~~~A~~~g~~~~~~~ 291 (368)
T 1sjd_A 275 RVHDVCAAHGIPVWCGG 291 (368)
T ss_dssp HHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHcCCcEEeCC
Confidence 78999999999965443
|
| >3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A | Back alignment and structure |
|---|
Probab=90.81 E-value=7.3 Score=33.51 Aligned_cols=151 Identities=14% Similarity=0.154 Sum_probs=94.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCC-----------cHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPY-----------TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTP 108 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g-----------~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~ 108 (235)
+.++..+.++.+.+.|++.|-. -|.. ......=+++++.-.+++-|.-.... ..+.
T Consensus 125 ~~e~~~~~a~~~~~~G~~~iKl---~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~----------~~~~ 191 (405)
T 3rr1_A 125 RPADVIAGMKALQAGGFDHFKL---NGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG----------RVSA 191 (405)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE---ESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS----------CBCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---ecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCC----------CCCH
Confidence 6788888889999999999987 2211 01122334555522234444433221 1344
Q ss_pred HHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCCHHHHHHHHhcCCeeEEeeccC
Q 026625 109 EYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWS 187 (235)
Q Consensus 109 ~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~~~~l~~~~~~~~~~~~q~~~n 187 (235)
+...+ +-+.|+.+++++| ..|-+. +.++.+.++++.-.|.-. |=+-++..+++++++....+++|+..+
T Consensus 192 ~~A~~-~~~~L~~~~i~~i-----EeP~~~----~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~ 261 (405)
T 3rr1_A 192 PMAKV-LIKELEPYRPLFI-----EEPVLA----EQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQPDLS 261 (405)
T ss_dssp HHHHH-HHHHHGGGCCSCE-----ECSSCC----SSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTT
T ss_pred HHHHH-HHHHHHhcCCCEE-----ECCCCc----ccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChh
Confidence 43333 3345667766554 455332 235777888776555543 336688999999998888999999876
Q ss_pred ccccccc-chHHHHHHHhCCeEEeccc
Q 026625 188 LWARDIE-NEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 188 ~~~~~~~-~~l~~~~~~~gi~v~a~sp 213 (235)
-.-.-.+ ..+...|+++|+.+...+.
T Consensus 262 ~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 262 HAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp TTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred hcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 5432112 6789999999999987764
|
| >2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A | Back alignment and structure |
|---|
Probab=90.73 E-value=1.8 Score=37.73 Aligned_cols=151 Identities=11% Similarity=0.128 Sum_probs=88.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+....+.+.|++.|..--. ++-......=+++++.-.+++-|.-.... ..+.+...+-++. |
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g-~~~~~d~e~v~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~-l 265 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVG-ANVQDDIRRCRLARAAIGPDIAMAVDANQ----------RWDVGPAIDWMRQ-L 265 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECC-SCHHHHHHHHHHHHHHHCSSSEEEEECTT----------CCCHHHHHHHHHT-T
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccC-CCHHHHHHHHHHHHHhcCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 5677778888899999999874211 11011112224555411223333332211 2345544444433 6
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-CCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
+.+++++ +..|-.. +.++.+.++++. +.|- ..|=+-+++.+++++++....+++|+..+-.-.-.+ ..
T Consensus 266 ~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ 336 (441)
T 2hxt_A 266 AEFDIAW-----IEEPTSP----DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLA 336 (441)
T ss_dssp GGGCCSC-----EECCSCT----TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHHH
T ss_pred HhcCCCe-----eeCCCCH----HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcceeCCHHHHHH
Confidence 6666554 4445332 346667777765 2333 334466789999999988889999997765432112 57
Q ss_pred HHHHHHHhCCeEEec
Q 026625 197 IVPLCRELGIGIVPY 211 (235)
Q Consensus 197 l~~~~~~~gi~v~a~ 211 (235)
+...|+++|+.+...
T Consensus 337 ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 337 ILLLAAKFGVRVFPH 351 (441)
T ss_dssp HHHHHHHTTCEECCC
T ss_pred HHHHHHHcCCeEEEe
Confidence 889999999998643
|
| >1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A* | Back alignment and structure |
|---|
Probab=90.51 E-value=3.2 Score=35.48 Aligned_cols=152 Identities=13% Similarity=-0.012 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+....+.+.|++.|..--.-++-.....+=+++++.-.+++.|.-.... ..+.+...+-++. |
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-l 233 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEIGKDAQLAVDANG----------RFNLETGIAYAKM-L 233 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHHTTTCEEEEECTT----------CCCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 5677778888889999999874211111012222223444411224444433321 1345444443333 6
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcC----CeeEEeeccCccccccc
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVH----PITAVQLEWSLWARDIE 194 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~ 194 (235)
+.++++ ++..|-+. +.++.+.++++.-.|--.+- +-++.++++++++.. ..+++|+..+-.-.-.+
T Consensus 234 ~~~~i~-----~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit~ 304 (392)
T 1tzz_A 234 RDYPLF-----WYEEVGDP----LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLCE 304 (392)
T ss_dssp TTSCCS-----EEECCSCT----TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHHH
T ss_pred HHcCCC-----eecCCCCh----hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccCCHHH
Confidence 666654 34555332 35777788877655554433 456889999999887 78999997765433222
Q ss_pred -chHHHHHHHhCCe---EEec
Q 026625 195 -NEIVPLCRELGIG---IVPY 211 (235)
Q Consensus 195 -~~l~~~~~~~gi~---v~a~ 211 (235)
..+...|+++|+. ++..
T Consensus 305 ~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 305 YQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp HHHHHHHHHHTTCCGGGBCCS
T ss_pred HHHHHHHHHHCCCCCceEeec
Confidence 6789999999999 7766
|
| >4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A* | Back alignment and structure |
|---|
Probab=90.51 E-value=6.1 Score=33.85 Aligned_cols=151 Identities=12% Similarity=0.074 Sum_probs=91.3
Q ss_pred CHHHHHHHH-HHHHHcCCCeEeCCCCCC------CCcHHHHHHHHHhc--CCCCCEEEEeccccccCCCcccccCCCHHH
Q 026625 40 SEEDGISII-KHAFSKGITFFDTADKYG------PYTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEY 110 (235)
Q Consensus 40 ~~~~~~~~l-~~A~~~Gi~~~DtA~~Yg------~g~sE~~lG~al~~--~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~ 110 (235)
+.++..+.+ +.+++.|++.|-.=-... +-..+...=+++++ .+.-.+.| .... ..+.+.
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~v--DaN~----------~~~~~~ 206 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGF--DANN----------GYSVGG 206 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEE--ECTT----------CCCHHH
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEE--ECCC----------CCCHHH
Confidence 467777777 888999999886532110 00122223345555 23224443 3221 134443
Q ss_pred HHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCCHHHHHHHHhcCCeeEEeeccCcc
Q 026625 111 VRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLW 189 (235)
Q Consensus 111 i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~~~~l~~~~~~~~~~~~q~~~n~~ 189 (235)
..+ +-+.|+.+++++| ..|-.. +.++.+.++++.-.|.-. |=|-++..+++++++.. ++++|+..+-.
T Consensus 207 A~~-~~~~L~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~~k~~~~ 275 (393)
T 4dwd_A 207 AIR-VGRALEDLGYSWF-----EEPVQH----YHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRMVQPDIVKM 275 (393)
T ss_dssp HHH-HHHHHHHTTCSEE-----ECCSCT----TCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCEECCCTTTT
T ss_pred HHH-HHHHHHhhCCCEE-----ECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCEEEeCcccc
Confidence 332 3346677776544 445332 246777888876555433 33567899999999888 99999987654
Q ss_pred ccccc-chHHHHHHHhCCeEEeccc
Q 026625 190 ARDIE-NEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 190 ~~~~~-~~l~~~~~~~gi~v~a~sp 213 (235)
-.-.+ ..+.+.|+++|+.+...+.
T Consensus 276 GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 276 GGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp THHHHHHHHHHHHHHHTCEECCCCC
T ss_pred CCHHHHHHHHHHHHHcCCEEeecCC
Confidence 32112 6789999999999987766
|
| >3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia} | Back alignment and structure |
|---|
Probab=90.43 E-value=7.5 Score=33.36 Aligned_cols=148 Identities=10% Similarity=-0.030 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
.++..+.++.+++.|++.|..=- +.....+.+ +++++ .+.-.+.|=...+ .+.+. .+ +-+.
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv--~~~~d~~~v-~avR~a~G~~~~L~vDaN~~------------w~~~~-~~-~~~~ 226 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKI--KPGWDVEPL-QETRRAVGDHFPLWTDANSS------------FELDQ-WE-TFKA 226 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEC--BTTBSHHHH-HHHHHHHCTTSCEEEECTTC------------CCGGG-HH-HHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe--CcchHHHHH-HHHHHhcCCCCEEEEeCCCC------------CCHHH-HH-HHHH
Confidence 67888888999999999886532 222233333 45555 2433454432211 23333 22 3356
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
|+.+++++| ..|-.. +.++.+.++++.-.|. ..|=|-++..++.++++...++++|+..+-.-.-.+ ..
T Consensus 227 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 297 (400)
T 3mwc_A 227 MDAAKCLFH-----EQPLHY----EALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIK 297 (400)
T ss_dssp HGGGCCSCE-----ESCSCT----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCCCEE-----eCCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHH
Confidence 777766554 445332 2467777887764444 344467889999999998889999997655432112 67
Q ss_pred HHHHHHHhCCeEEecccC
Q 026625 197 IVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl 214 (235)
+.+.|+++|+.+...+.+
T Consensus 298 ia~~A~~~gi~~~~~~~~ 315 (400)
T 3mwc_A 298 IYKIATDNGIKLWGGTMP 315 (400)
T ss_dssp HHHHHHHTTCEEEECCSC
T ss_pred HHHHHHHcCCEEEecCCC
Confidence 899999999999887644
|
| >3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A* | Back alignment and structure |
|---|
Probab=90.42 E-value=6.7 Score=33.51 Aligned_cols=152 Identities=8% Similarity=-0.025 Sum_probs=93.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+.++.+.+.|++.|..=-.-. -..+..+=+++++.-.+++-|.-+... ..+.+...+ +-+.|
T Consensus 151 ~~e~~~~~a~~~~~~G~~~iKiKvG~~-~~~d~~~v~avR~a~g~d~~l~vDan~----------~~~~~~A~~-~~~~l 218 (389)
T 3ozy_A 151 TPDQAADELAGWVEQGFTAAKLKVGRA-PRKDAANLRAMRQRVGADVEILVDANQ----------SLGRHDALA-MLRIL 218 (389)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEeeccCCC-HHHHHHHHHHHHHHcCCCceEEEECCC----------CcCHHHHHH-HHHHH
Confidence 678888888999999999998632111 112223334555511234444444321 134444333 33466
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHH-HcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLV-EEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~-~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
+.+++++| ..|-+. +.++.+.+++ +.-.|.-.+- +-++.++++++++...++++|+..+-.-.-.+ ..
T Consensus 219 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 289 (389)
T 3ozy_A 219 DEAGCYWF-----EEPLSI----DDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALA 289 (389)
T ss_dssp HHTTCSEE-----ESCSCT----TCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHH
T ss_pred HhcCCCEE-----ECCCCc----ccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 77776554 445332 2467778887 6545543333 45678899999988889999998766532212 67
Q ss_pred HHHHHHHhCCeEEecc
Q 026625 197 IVPLCRELGIGIVPYC 212 (235)
Q Consensus 197 l~~~~~~~gi~v~a~s 212 (235)
+...|+++|+.++..+
T Consensus 290 ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 290 ISASAASAHLAWNPHT 305 (389)
T ss_dssp HHHHHHHTTCEECCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 8999999999998764
|
| >3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A* | Back alignment and structure |
|---|
Probab=90.41 E-value=7.5 Score=32.95 Aligned_cols=153 Identities=14% Similarity=0.071 Sum_probs=93.5
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+..+.+++. |++.|-.=-.-.+...+...=+++++.-.+++.|.-..... .+.+... +.
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~----------~~~~~a~----~~ 216 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGK----------WDLPTCQ----RF 216 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTTC----------CCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCCC----------CCHHHHH----HH
Confidence 567777888889999 99988653211111123333455665222344444443211 2333322 23
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
++.|. ..++.++..|-+. +.++.+.+++++-.|. ..|=|-++..+++++++...++++|+..+-.-.-.+ ..
T Consensus 217 ~~~l~--~~~i~~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 290 (372)
T 3tj4_A 217 CAAAK--DLDIYWFEEPLWY----DDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQ 290 (372)
T ss_dssp HHHTT--TSCEEEEESCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred HHHHh--hcCCCEEECCCCc----hhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 33442 3467777776443 2367777777764444 344467889999999998889999998765432112 67
Q ss_pred HHHHHHHhCCeEEecc
Q 026625 197 IVPLCRELGIGIVPYC 212 (235)
Q Consensus 197 l~~~~~~~gi~v~a~s 212 (235)
+.+.|+++|+.+...+
T Consensus 291 ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 291 VADLALAHRLPVVPHA 306 (372)
T ss_dssp HHHHHHHTTCCBCCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 8999999999988665
|
| >2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=90.18 E-value=8 Score=32.94 Aligned_cols=149 Identities=15% Similarity=0.042 Sum_probs=90.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+....+.+.|++.|..--.-++-.....+=+++++.-.+++-|.-.... ..+.+...+-++ .|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~~~~l~vDan~----------~~~~~~a~~~~~-~l 213 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTCVPAGSKVMIDPNE----------AWTSKEALTKLV-AI 213 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTTSCTTCEEEEECTT----------CBCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHhhCCCCeEEEECCC----------CCCHHHHHHHHH-HH
Confidence 5677778888889999999874321111012222234555422234544444321 134555544443 37
Q ss_pred HH--cCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcC-CccEEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccccch
Q 026625 120 RR--LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENE 196 (235)
Q Consensus 120 ~~--Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~ 196 (235)
+. +++ .++..|-+. +.++.+.++++.- .|--.+--+.+.++++++++....+++|+. .-+.. -..
T Consensus 214 ~~~g~~i-----~~iEqP~~~----~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik-GGit~--a~~ 281 (389)
T 2oz8_A 214 REAGHDL-----LWVEDPILR----HDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH-GQVTD--VMR 281 (389)
T ss_dssp HHTTCCC-----SEEESCBCT----TCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC-SCHHH--HHH
T ss_pred HhcCCCc-----eEEeCCCCC----cCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC-cCHHH--HHH
Confidence 77 443 345555322 3477788888764 565444433388999999998889999998 21111 157
Q ss_pred HHHHHHHhCCeEEec
Q 026625 197 IVPLCRELGIGIVPY 211 (235)
Q Consensus 197 l~~~~~~~gi~v~a~ 211 (235)
+.+.|+++|+.++..
T Consensus 282 i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 282 IGWLAAELGIPISIG 296 (389)
T ss_dssp HHHHHHHHTCCEEEC
T ss_pred HHHHHHHcCCeEeec
Confidence 899999999999988
|
| >3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A* | Back alignment and structure |
|---|
Probab=89.83 E-value=8.5 Score=32.75 Aligned_cols=159 Identities=13% Similarity=0.114 Sum_probs=95.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+.++.+++.|++.|-.=-... ...+...=+++++.-.+++-|.-.... ..+.+...+ +-+.|
T Consensus 142 ~~e~~~~~a~~~~~~Gf~~~KlK~g~~-~~~d~~~v~avR~a~g~~~~L~vDaN~----------~w~~~~A~~-~~~~l 209 (379)
T 3r0u_A 142 NVAETIQNIQNGVEANFTAIKVKTGAD-FNRDIQLLKALDNEFSKNIKFRFDANQ----------GWNLAQTKQ-FIEEI 209 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSC-HHHHHHHHHHHHHHCCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeecCCC-HHHHHHHHHHHHHhcCCCCeEEEeCCC----------CcCHHHHHH-HHHHH
Confidence 567777888888999999886532221 112333334566522223333333221 123333222 22333
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCc-cEEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+..+ .++.++..|-... .++.+.++++.-.| -..|=|-++..++.++++....+++|+..+-.-.-.+ ..+
T Consensus 210 ~~~~---~~l~~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~i 282 (379)
T 3r0u_A 210 NKYS---LNVEIIEQPVKYY----DIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKI 282 (379)
T ss_dssp HTSC---CCEEEEECCSCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcC---CCcEEEECCCCcc----cHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHH
Confidence 4311 4677787774432 36677777765444 3445577899999999988888999997654332112 678
Q ss_pred HHHHHHhCCeEEecccCccc
Q 026625 198 VPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (235)
.+.|+++|+.++..+.+..+
T Consensus 283 a~~A~~~gi~~~~~~~~es~ 302 (379)
T 3r0u_A 283 KKLADSAGISCMVGCMMESP 302 (379)
T ss_dssp HHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHcCCEEEEeCCCccH
Confidence 99999999999987765433
|
| >2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=89.64 E-value=9 Score=32.74 Aligned_cols=151 Identities=11% Similarity=0.026 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCC--CCCCCC--cHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCC--CHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTA--DKYGPY--TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKG--TPEYVRS 113 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA--~~Yg~g--~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~--~~~~i~~ 113 (235)
+.++..+....+.+.|++.|..- + .|.. +....+=+++++.-.+++-|.-+... .. +.+...+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~sp-vG~~~~~~~~e~v~avr~a~G~d~~l~vDan~----------~~~~~~~~a~~ 213 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGP-IGRGTVAADADQIMAAREGLGPDGDLMVDVGQ----------IFGEDVEAAAA 213 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTT-TTSSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTTTCHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCC-CCCCHHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCCHHHHHH
Confidence 56777788888999999998752 1 2321 11222233444411124444444321 13 4554444
Q ss_pred HHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHH-cCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCcccc
Q 026625 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE-EGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR 191 (235)
Q Consensus 114 ~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~-~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~ 191 (235)
-++ .|+.+++++ +..|-.. +.|+.+.++++ .-.|--++. +.++.+.++++++....+++|+..+..-.
T Consensus 214 ~~~-~l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 283 (401)
T 2hzg_A 214 RLP-TLDAAGVLW-----LEEPFDA----GALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGG 283 (401)
T ss_dssp THH-HHHHTTCSE-----EECCSCT----TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTS
T ss_pred HHH-HHHhcCCCE-----EECCCCc----cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCC
Confidence 443 377777664 4444322 35777888877 555554444 44678999999988889999997665432
Q ss_pred ccc-chHHHHHHHhCCeEEec
Q 026625 192 DIE-NEIVPLCRELGIGIVPY 211 (235)
Q Consensus 192 ~~~-~~l~~~~~~~gi~v~a~ 211 (235)
-.+ ..+.+.|+++|+.++..
T Consensus 284 it~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 284 LGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEecC
Confidence 112 57899999999998876
|
| >3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A* | Back alignment and structure |
|---|
Probab=89.46 E-value=3.1 Score=35.53 Aligned_cols=155 Identities=14% Similarity=0.085 Sum_probs=92.2
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+.++.+++. |++.|-.=-...+-..+...=+++++.-.+++-|.-..... .+.+...+ +-+.
T Consensus 167 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~----------~~~~~A~~-~~~~ 235 (383)
T 3toy_A 167 DARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQS----------LDPAEATR-RIAR 235 (383)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECTTC----------SCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCCC----------CCHHHHHH-HHHH
Confidence 567888888899999 99988643211111123333345555112333343333211 23443332 3345
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
|+.++++ ++..|-+. +.++.+.++++.-.|. ..|=|-++..++.++++....+++|+..+-.-.-.+ ..
T Consensus 236 l~~~~i~-----~iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ 306 (383)
T 3toy_A 236 LADYDLT-----WIEEPVPQ----ENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLN 306 (383)
T ss_dssp HGGGCCS-----EEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHH
T ss_pred HHhhCCC-----EEECCCCc----chHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 5666544 45555332 2356677787764454 334466788999999988889999998765432112 67
Q ss_pred HHHHHHHhCCeEEecccC
Q 026625 197 IVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl 214 (235)
+.+.|+++|+.+...+.+
T Consensus 307 ia~~A~~~gi~~~~h~~~ 324 (383)
T 3toy_A 307 VAGQADAASIPMSSHILP 324 (383)
T ss_dssp HHHHHHHHTCCBCCCSCH
T ss_pred HHHHHHHcCCEEeecCHH
Confidence 899999999998866554
|
| >3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP} | Back alignment and structure |
|---|
Probab=89.23 E-value=5.3 Score=34.22 Aligned_cols=156 Identities=13% Similarity=0.073 Sum_probs=92.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCC--------CcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGP--------YTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEY 110 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--------g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~ 110 (235)
+.++..+.++.+++.|++.|=.=-...+ -..+...=+++++ .+. +-|.--... ..+.+.
T Consensus 165 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~~d--~~L~vDaN~----------~w~~~~ 232 (393)
T 3u9i_A 165 SVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAPT--ARLILDGNC----------GYTAPD 232 (393)
T ss_dssp -CHHHHHHHHHHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHSTT--SEEEEECCS----------CCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHCCC--CeEEEEccC----------CCCHHH
Confidence 3466777788889999998753221110 0012222234554 432 222222111 123332
Q ss_pred HHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCc-cEEEeCCCCHHHHHHHHhcCCeeEEeeccCcc
Q 026625 111 VRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLW 189 (235)
Q Consensus 111 i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~ 189 (235)
. .+.+++|..+.+++.++..|-+.. .++.+.++.+.-.| -+.|=|.++..++.++++...++++|+..+.
T Consensus 233 A----~~~~~~L~~~~~~i~~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~- 303 (393)
T 3u9i_A 233 A----LRLLDMLGVHGIVPALFEQPVAKD----DEEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMK- 303 (393)
T ss_dssp H----HHHHHTTTTTTCCCSEEECCSCTT----CTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH-
T ss_pred H----HHHHHHHhhCCCCeEEEECCCCCC----cHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccc-
Confidence 2 234455532346788888775432 24566777765433 3556677899999999988889999998765
Q ss_pred ccccc-chHHHHHHHhCCeEEecccCcc
Q 026625 190 ARDIE-NEIVPLCRELGIGIVPYCPLGR 216 (235)
Q Consensus 190 ~~~~~-~~l~~~~~~~gi~v~a~spl~~ 216 (235)
-.-.+ ..+.+.|+++|+.++..+.+..
T Consensus 304 GGit~~~~ia~~A~~~gi~~~~~~~~es 331 (393)
T 3u9i_A 304 CGIVEALDIAAIARTAGLHLMIGGMVES 331 (393)
T ss_dssp HCHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred cCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 22112 6789999999999998776543
|
| >3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A | Back alignment and structure |
|---|
Probab=89.01 E-value=3.6 Score=35.58 Aligned_cols=153 Identities=13% Similarity=0.109 Sum_probs=93.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCC--C----cHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGP--Y----TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g----~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~ 113 (235)
+.++..+..+.+.+.|++.|..=-..++ | +.....=+++++.-.+++-|.-.... ..+.+...+
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~----------~~~~~~Ai~ 248 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYM----------GWNLDYAKR 248 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHHH
Confidence 5677888889999999999876433321 1 11222233455411234444444321 134444333
Q ss_pred HHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCCHHHHHHHHhcCCeeEEeeccCccccc
Q 026625 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARD 192 (235)
Q Consensus 114 ~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~ 192 (235)
+-+.|+.+++++ +..|-+. +.++.+.++++.-.|.-. |=+-++..+++++++....+++|+..+-.-.-
T Consensus 249 -~~~~Le~~~i~~-----iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGi 318 (412)
T 3stp_A 249 -MLPKLAPYEPRW-----LEEPVIA----DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGI 318 (412)
T ss_dssp -HHHHHGGGCCSE-----EECCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHH
T ss_pred -HHHHHHhcCCCE-----EECCCCc----ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCH
Confidence 334566666544 4445332 246778888887555433 34668899999999988899999976554321
Q ss_pred c-cchHHHHHHHhCCeEEecc
Q 026625 193 I-ENEIVPLCRELGIGIVPYC 212 (235)
Q Consensus 193 ~-~~~l~~~~~~~gi~v~a~s 212 (235)
. -..+...|+++|+.++..+
T Consensus 319 t~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 319 TAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp HHHHHHHHHHHHHTCCBCCSS
T ss_pred HHHHHHHHHHHHcCCEEEecc
Confidence 1 2678999999999998665
|
| >3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans} | Back alignment and structure |
|---|
Probab=89.00 E-value=6.3 Score=33.48 Aligned_cols=155 Identities=10% Similarity=0.063 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+.++.+++.|++.|-.=-.-.+-..+...=+++++.-.+++-|.-..... .+.+...+ +-+.|
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~----------~~~~~A~~-~~~~l 214 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQA----------LTPFGAMK-ILRDV 214 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEECTTC----------CCTTTHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHhCCCCeEEEeCCCC----------cCHHHHHH-HHHHH
Confidence 45665666778888999988653211110122333345554111233333333211 12222221 33455
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cchH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~l 197 (235)
+.+++++| ..|-+. +.++.+.++++.-.|. ..|=+-++..++.++++....+++|+..+-.-.-. -..+
T Consensus 215 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i 285 (377)
T 3my9_A 215 DAFRPTFI-----EQPVPR----RHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSL 285 (377)
T ss_dssp HTTCCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHH
T ss_pred hhcCCCEE-----ECCCCc----cCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 66665554 444322 2467777787764443 33446688999999998888999998765433211 2678
Q ss_pred HHHHHHhCCeEEecccC
Q 026625 198 VPLCRELGIGIVPYCPL 214 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (235)
...|+++|+.++..+.+
T Consensus 286 ~~~a~~~gi~~~~~~~~ 302 (377)
T 3my9_A 286 MAIADTAGLPGYGGTLW 302 (377)
T ss_dssp HHHHHHHTCCEECCEEC
T ss_pred HHHHHHcCCeEecCCCC
Confidence 99999999999765433
|
| >2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A | Back alignment and structure |
|---|
Probab=89.00 E-value=8.5 Score=32.67 Aligned_cols=151 Identities=9% Similarity=0.025 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHH
Q 026625 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (235)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 121 (235)
++..+....+.+.|++.|..--.-++-+.....=+++++.-.+++.|.-.... ..+.+...+-++ .|+.
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~-~l~~ 209 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTAGSSITMILDANQ----------SYDAAAAFKWER-YFSE 209 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHTTHH-HHTT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhhCCCCEEEEECCC----------CCCHHHHHHHHH-HHhh
Confidence 66667778888999998874211111011122223444411124444433321 134444333332 2444
Q ss_pred cCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeeccCccccccc-chHHH
Q 026625 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEIVP 199 (235)
Q Consensus 122 Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l~~ 199 (235)
+ -++.++..|-+. +.++.+.++++.-.|--.+- +.++.+.++++++....+++|+..+-.-.-.+ ..+.+
T Consensus 210 ~----~~i~~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~ 281 (382)
T 2gdq_A 210 W----TNIGWLEEPLPF----DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQ 281 (382)
T ss_dssp C----SCEEEEECCSCS----SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHH
T ss_pred c----cCCeEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHH
Confidence 4 045566666432 34677777877655544433 55788999999988889999998765432212 67899
Q ss_pred HHHHhCCeEEec
Q 026625 200 LCRELGIGIVPY 211 (235)
Q Consensus 200 ~~~~~gi~v~a~ 211 (235)
.|+++|+.++..
T Consensus 282 ~A~~~g~~~~~~ 293 (382)
T 2gdq_A 282 LARYFGVRASAH 293 (382)
T ss_dssp HHHHHTCEECCC
T ss_pred HHHHcCCEEeec
Confidence 999999998877
|
| >4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A | Back alignment and structure |
|---|
Probab=88.82 E-value=3.7 Score=35.28 Aligned_cols=150 Identities=11% Similarity=0.139 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHc-CCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 41 EEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 41 ~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
.++..+.++.+++. |++.|=.=-... ...+...=+++++.- +++-|.-.... ..+.+...+ +-+.|
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~~-~~~d~~~v~avR~~~-~~~~l~vDaN~----------~w~~~~A~~-~~~~l 235 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTTD-CAGDVAILRAVREAL-PGVNLRVDPNA----------AWSVPDSVR-AGIAL 235 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCSC-HHHHHHHHHHHHHHC-TTSEEEEECTT----------CSCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCCC-HHHHHHHHHHHHHhC-CCCeEEeeCCC----------CCCHHHHHH-HHHHH
Confidence 47777888888998 999885432211 112223334555522 44444443221 123433332 33455
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+.+++. ++..|-+ .++.+.++++.-.|. ..|=|-++..++.++++...++++|+..+-.-.-.+ ..+
T Consensus 236 ~~~~i~-----~iEqP~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~i 304 (398)
T 4dye_A 236 EELDLE-----YLEDPCV------GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKAL 304 (398)
T ss_dssp GGGCCS-----EEECCSS------HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcCCC-----EEcCCCC------CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHH
Confidence 665544 4454432 578888888764443 344466888999999988889999997655432112 678
Q ss_pred HHHHHHhCCeEEecccC
Q 026625 198 VPLCRELGIGIVPYCPL 214 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl 214 (235)
.+.|+++|+.++..+..
T Consensus 305 a~~A~~~gi~~~~h~~~ 321 (398)
T 4dye_A 305 AAHCETFGLGMNLHSGG 321 (398)
T ss_dssp HHHHHHHTCEEEECCSC
T ss_pred HHHHHHcCCeEEEcCCc
Confidence 99999999999988744
|
| >4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans} | Back alignment and structure |
|---|
Probab=88.12 E-value=12 Score=32.06 Aligned_cols=153 Identities=11% Similarity=0.021 Sum_probs=93.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+.++.+++.|++.|..=-.-.+-..+...=+++++ ...+++-|.-..... .+++. ..+.
T Consensus 164 ~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~gg~~~~L~vDaN~~----------w~~~~----A~~~ 229 (391)
T 4e8g_A 164 QPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERIRGTGTRLAVDGNRS----------LPSRD----ALRL 229 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHHTTTTCEEEEECTTC----------CCHHH----HHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCC----------CCHHH----HHHH
Confidence 56777888888999999998643211010122222345544 221344444443221 23332 2234
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~ 196 (235)
+++|. ..++ ++..|. ..++.+.++++.-.|. ..|=|-++..++.++++...++++|+..+-.-.-. -..
T Consensus 230 ~~~L~--~~~i-~iEeP~------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ 300 (391)
T 4e8g_A 230 SRECP--EIPF-VLEQPC------NTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAA 300 (391)
T ss_dssp HHHCT--TSCE-EEESCS------SSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHH
T ss_pred HHHHh--hcCe-EEecCC------ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 45553 3477 777662 1467778887764443 44556788999999998888999999765443211 167
Q ss_pred HHHHHHHhCCeEEecccCc
Q 026625 197 IVPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl~ 215 (235)
+.+.|+++|+.+...+.+.
T Consensus 301 ia~~A~~~gi~~~~~~~~e 319 (391)
T 4e8g_A 301 FRDICEARALPHSCDDAWG 319 (391)
T ss_dssp HHHHHHHTTCCEEEECSSC
T ss_pred HHHHHHHcCCeEEeCCcCC
Confidence 8999999999998766554
|
| >3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=88.01 E-value=6.1 Score=33.84 Aligned_cols=149 Identities=11% Similarity=0.114 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
++..+..+.+.+.|++.|..=-... ...+...=+++++ .+.-.+.|=...+ .+.+...+ +-+.|
T Consensus 157 e~~~~~a~~~~~~G~~~iKlK~g~~-~~~d~~~v~avR~a~g~~~~l~vDaN~~------------~~~~~A~~-~~~~L 222 (392)
T 3ddm_A 157 ENPEDVVARKAAEGYRAFKLKVGFD-DARDVRNALHVRELLGAATPLMADANQG------------WDLPRARQ-MAQRL 222 (392)
T ss_dssp SSHHHHHHHHHHHTCCCEEEECSSC-HHHHHHHHHHHHHHHCSSSCEEEECTTC------------CCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC-HHHHHHHHHHHHHhcCCCceEEEeCCCC------------CCHHHHHH-HHHHH
Confidence 4556777788899999887532221 1122233345555 2333444432211 23443332 33456
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cchH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~l 197 (235)
+.+++++ +..|-+..+ .++.+.++++.-.|. ..|=|-++..+++++++...++++|+..+-.-.-. -..+
T Consensus 223 ~~~~i~~-----iEeP~~~~d---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~i 294 (392)
T 3ddm_A 223 GPAQLDW-----LEEPLRADR---PAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPV 294 (392)
T ss_dssp GGGCCSE-----EECCSCTTS---CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHH
T ss_pred HHhCCCE-----EECCCCccc---hHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHH
Confidence 6666554 444533211 267778887764444 33446688999999998888999999765443211 2678
Q ss_pred HHHHHHhCCeEEecc
Q 026625 198 VPLCRELGIGIVPYC 212 (235)
Q Consensus 198 ~~~~~~~gi~v~a~s 212 (235)
...|+++|+.++..+
T Consensus 295 a~~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 295 ARAVVAAGLRYCPHY 309 (392)
T ss_dssp HHHHHHTTCEECCEE
T ss_pred HHHHHHcCCEEEecC
Confidence 999999999997544
|
| >1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=87.81 E-value=10 Score=32.34 Aligned_cols=151 Identities=13% Similarity=0.081 Sum_probs=90.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+.+..+.+.|++.|-.-- |.....+.+ +++++.- .++.|.--.... .+.+.. + -+
T Consensus 161 ~~e~~~~~a~~~~~~G~~~~KiKv--g~~~d~~~v-~avr~a~-~~~~l~vDaN~~----------~~~~~a-~----~~ 221 (393)
T 1wuf_A 161 NVETLLQLVNQYVDQGYERVKLKI--APNKDIQFV-EAVRKSF-PKLSLMADANSA----------YNREDF-L----LL 221 (393)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--BTTBSHHHH-HHHHTTC-TTSEEEEECTTC----------CCGGGH-H----HH
T ss_pred CHHHHHHHHHHHHHHhhHhheecc--ChHHHHHHH-HHHHHHc-CCCEEEEECCCC----------CCHHHH-H----HH
Confidence 456677777888899999875311 112233444 5666522 344444332211 233333 2 23
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+.| +..++.++..|-... .++.+.++.++-.|. ..|=|-++..++.++++...++++|+..+-.-.-.+ ..+
T Consensus 222 ~~l--~~~~i~~iEqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i 295 (393)
T 1wuf_A 222 KEL--DQYDLEMIEQPFGTK----DFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKI 295 (393)
T ss_dssp HTT--GGGTCSEEECCSCSS----CSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHH
T ss_pred HHH--HhCCCeEEECCCCCc----CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHH
Confidence 333 224666777775432 355666776654443 334456788999999988888999998765433222 678
Q ss_pred HHHHHHhCCeEEecccCc
Q 026625 198 VPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (235)
.+.|+++|+.++..+.+.
T Consensus 296 a~~A~~~gi~~~~~~~~e 313 (393)
T 1wuf_A 296 AEYCALNEILVWCGGMLE 313 (393)
T ss_dssp HHHHHHTTCEEEECCCCC
T ss_pred HHHHHHcCCeEEecCCcc
Confidence 999999999998776553
|
| >3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A | Back alignment and structure |
|---|
Probab=87.59 E-value=2.1 Score=36.22 Aligned_cols=156 Identities=10% Similarity=0.035 Sum_probs=92.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+..+.+++.|++.|..=-.-. ...+...=+++++.-.+++-|.-..... .+.+...+ +-+.|
T Consensus 140 ~~~~~~~~a~~~~~~G~~~~K~K~G~~-~~~d~~~v~avR~~~g~~~~l~vDan~~----------~~~~~a~~-~~~~l 207 (356)
T 3ro6_B 140 PVEETLAEAREHLALGFRVLKVKLCGD-EEQDFERLRRLHETLAGRAVVRVDPNQS----------YDRDGLLR-LDRLV 207 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHHHHHTTSSEEEEECTTC----------CCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCC-HHHHHHHHHHHHHHhCCCCEEEEeCCCC----------CCHHHHHH-HHHHH
Confidence 567777888889999999987532111 1122333345555111234444443221 23443332 33566
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcC-CeeEEeeccCccccccc-ch
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVH-PITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~-~~~~~q~~~n~~~~~~~-~~ 196 (235)
+.+++++|. .|-.. +.++.+.+++++-.|. ..|=|-++..++.++++.. .++++|+..+-.-.-.+ ..
T Consensus 208 ~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 278 (356)
T 3ro6_B 208 QELGIEFIE-----QPFPA----GRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARR 278 (356)
T ss_dssp HHTTCCCEE-----CCSCT----TCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHH
T ss_pred HhcCCCEEE-----CCCCC----CcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHH
Confidence 777766553 44332 2356666665543333 3344668899999999888 89999997654332112 67
Q ss_pred HHHHHHHhCCeEEecccCcc
Q 026625 197 IVPLCRELGIGIVPYCPLGR 216 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl~~ 216 (235)
+.+.|+++|+.++..+.+..
T Consensus 279 i~~~a~~~gi~~~~~~~~es 298 (356)
T 3ro6_B 279 IATIAETAGIDLMWGCMDES 298 (356)
T ss_dssp HHHHHHHHTCEEEECCCSCC
T ss_pred HHHHHHHcCCEEEecCCccc
Confidence 89999999999987766543
|
| >3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1} | Back alignment and structure |
|---|
Probab=87.05 E-value=12 Score=32.02 Aligned_cols=149 Identities=13% Similarity=0.036 Sum_probs=90.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+.++.+++.|++.|=.=- |.+...+.+ +++++ . .++.|.--.... .+.+.... + +.
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv--~~~~d~~~v-~avR~~~--~~~~l~vDaN~~----------~~~~~A~~-~-~~ 211 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKI--APGRDRAAI-KAVRLRY--PDLAIAADANGS----------YRPEDAPV-L-RQ 211 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC--BTTBSHHHH-HHHHHHC--TTSEEEEECTTC----------CCGGGHHH-H-HH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEe--CcHHHHHHH-HHHHHHC--CCCeEEEECCCC----------CChHHHHH-H-HH
Confidence 468888888999999999864321 122233444 35554 4 233333322111 22332222 2 23
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCc-cEEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
|+. .++.++..|-... -++.+.++.+.-.| -..|=|.++..++.++++...++++|+..+-.-.-.+ ..
T Consensus 212 l~~-----~~i~~iEeP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ 282 (388)
T 3qld_A 212 LDA-----YDLQFIEQPLPED----DWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLR 282 (388)
T ss_dssp GGG-----GCCSCEECCSCTT----CHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred Hhh-----CCCcEEECCCCcc----cHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHH
Confidence 333 4566677665433 25667777765334 3456677889999999988888999997655432112 67
Q ss_pred HHHHHHHhCCeEEecccC
Q 026625 197 IVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl 214 (235)
+...|+++|+.++..+.+
T Consensus 283 ia~~A~~~gi~~~~~~~~ 300 (388)
T 3qld_A 283 ALDVAGEAGMAAWVGGMY 300 (388)
T ss_dssp HHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHCCCeEEecCcc
Confidence 899999999999876654
|
| >3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=86.90 E-value=14 Score=32.30 Aligned_cols=153 Identities=14% Similarity=0.189 Sum_probs=91.3
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHH
Q 026625 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (235)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 116 (235)
.+.++..+..+.+++. |++.|=.=-...+...+...=+++++ .+.-++.|=..-+ .+.+...
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~~~~~L~vDaN~~------------w~~~~Ai---- 253 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAFPGVPLRLDPNAA------------WTVETSK---- 253 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTTCCEEEECTTC------------BCHHHHH----
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCCCcEeeeCCCC------------CCHHHHH----
Confidence 4677777888888875 99987542211110122222345555 4222333322211 2332222
Q ss_pred HHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-c
Q 026625 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-E 194 (235)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~ 194 (235)
+.++.|. ++ +.++..|- + .++.+.++++.-.|. ..|=|.++..++.++++...++++|+..+-.-.-. -
T Consensus 254 ~~~~~L~-~~--l~~iEeP~---~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGitea 324 (445)
T 3va8_A 254 WVAKELE-GI--VEYLEDPA---G---EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKS 324 (445)
T ss_dssp HHHHHTT-TT--CSEEESCB---S---HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHh-hh--cCeEeecC---c---CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCHHHH
Confidence 3445554 33 66677663 2 477888887764333 45667788899999998888999999654432111 2
Q ss_pred chHHHHHHHhCCeEEecccCcc
Q 026625 195 NEIVPLCRELGIGIVPYCPLGR 216 (235)
Q Consensus 195 ~~l~~~~~~~gi~v~a~spl~~ 216 (235)
..+...|+++|+.+...+....
T Consensus 325 ~kia~lA~~~gv~v~~h~~~e~ 346 (445)
T 3va8_A 325 QTLASICATWGLRLSMHSNSHL 346 (445)
T ss_dssp HHHHHHHHHHTCEEEECCCSCC
T ss_pred HHHHHHHHHcCCEEEEeCCccc
Confidence 6789999999999998876543
|
| >3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A | Back alignment and structure |
|---|
Probab=86.71 E-value=7.8 Score=33.66 Aligned_cols=154 Identities=7% Similarity=0.007 Sum_probs=93.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC--C----CCCCcH------HHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCC
Q 026625 40 SEEDGISIIKHAFSKGITFFDTAD--K----YGPYTN------EILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~--~----Yg~g~s------E~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~ 107 (235)
+.++..+..+.+++.|++.|..=. . +|.... ...+=+++++.-.+++-|.-..... .+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~----------~t 215 (433)
T 3rcy_A 146 SADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQ----------FT 215 (433)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSC----------BC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCC----------CC
Confidence 568888888999999999887521 1 222111 1122234554112344444443221 24
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeecc
Q 026625 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEW 186 (235)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~ 186 (235)
.+...+ +-+.|+.++++ +++.|-+. +.++.+.++++.-.|- ..|=+-++..+++++++...++++|+..
T Consensus 216 ~~~A~~-~~~~Le~~~i~-----~iEeP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~ 285 (433)
T 3rcy_A 216 TAGAIR-LGQAIEPYSPL-----WYEEPVPP----DNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPAL 285 (433)
T ss_dssp HHHHHH-HHHHHGGGCCS-----EEECCSCT----TCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred HHHHHH-HHHHhhhcCCC-----EEECCCCh----hhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 443332 33456666654 44555332 2467778888775554 3344668899999999988899999876
Q ss_pred Ccccccc-cchHHHHHHHhCCeEEeccc
Q 026625 187 SLWARDI-ENEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 187 n~~~~~~-~~~l~~~~~~~gi~v~a~sp 213 (235)
+-.-.-. -..+.+.|+++|+.+...++
T Consensus 286 ~~~GGit~~~kia~lA~~~gv~~~~h~~ 313 (433)
T 3rcy_A 286 GRAGGIWEMKKVAAMAEVYNAQMAPHLY 313 (433)
T ss_dssp HHHTHHHHHHHHHHHHHTTTCEECCCCS
T ss_pred hhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 5432211 26789999999999987764
|
| >3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana} | Back alignment and structure |
|---|
Probab=86.27 E-value=6.3 Score=33.44 Aligned_cols=152 Identities=14% Similarity=0.132 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCC-CCC-CcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCC-HHHHHHHHHHH
Q 026625 42 EDGISIIKHAFSKGITFFDTADK-YGP-YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT-PEYVRSCCEAS 118 (235)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~DtA~~-Yg~-g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~-~~~i~~~~~~s 118 (235)
++..+..+.+.+.|++.|..=-. +|. -......=+++++.-.+++-|.-..... .+ .+...+ +-+.
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~~----------~~d~~~A~~-~~~~ 216 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLASK----------WHTCGHSAM-MAKR 216 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTTT----------TCSHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCC----------CCCHHHHHH-HHHH
Confidence 66677788889999999875332 211 0122223345555212344444333221 23 333322 2345
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
|+.++++ ++..|-+. +.++.+.++++.-.|.-. |=+-++..+++++++...++++|+..+-.-.-.+ ..
T Consensus 217 l~~~~i~-----~iEqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ 287 (374)
T 3sjn_A 217 LEEFNLN-----WIEEPVLA----DSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMKK 287 (374)
T ss_dssp SGGGCCS-----EEECSSCT----TCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHH
T ss_pred hhhcCce-----EEECCCCc----ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 5555554 44555332 246778888876555433 3355778899999988888999998765432112 67
Q ss_pred HHHHHHHhCCeEEeccc
Q 026625 197 IVPLCRELGIGIVPYCP 213 (235)
Q Consensus 197 l~~~~~~~gi~v~a~sp 213 (235)
+.+.|+++|+.+...+.
T Consensus 288 ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 288 IYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp HHHHHHHHTCEECCBCC
T ss_pred HHHHHHHcCCEEEecCC
Confidence 89999999999988766
|
| >3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A* | Back alignment and structure |
|---|
Probab=86.21 E-value=13 Score=32.39 Aligned_cols=88 Identities=11% Similarity=0.058 Sum_probs=60.2
Q ss_pred HHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-
Q 026625 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE- 194 (235)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~- 194 (235)
+.|+.+++ .++..|-+. +.++.+.++++.-.|. ..|=|-++..++.++++...++++|+..+-.-.-.+
T Consensus 261 ~~L~~~~i-----~~iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~ 331 (440)
T 3t6c_A 261 KALEPYQL-----FFLEDPVAP----ENTEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPA 331 (440)
T ss_dssp HHTGGGCC-----SEEECSSCG----GGGGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHH
T ss_pred HHhhhcCC-----CEEECCCCh----hhHHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCccceeechhhhCCHHHH
Confidence 34555554 444555321 3466777887764444 344467889999999998889999998765432212
Q ss_pred chHHHHHHHhCCeEEeccc
Q 026625 195 NEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 195 ~~l~~~~~~~gi~v~a~sp 213 (235)
..+.+.|+++|+.++..+.
T Consensus 332 ~~ia~~A~~~gi~~~~h~~ 350 (440)
T 3t6c_A 332 KKIAIYSELNGVRTAWHSP 350 (440)
T ss_dssp HHHHHHHHHTTCEECCCCS
T ss_pred HHHHHHHHHcCCEEEeccC
Confidence 6789999999999887665
|
| >3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=85.96 E-value=15 Score=31.14 Aligned_cols=155 Identities=9% Similarity=-0.029 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHH-cCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 41 EEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 41 ~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
.++..+....+++ .|++.|-.=-.-.+-..+...=+++++.-.+++-|.-..... .+.+...+ +-+.|
T Consensus 148 ~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~----------~~~~~A~~-~~~~l 216 (381)
T 3fcp_A 148 TAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEALGDRASIRVDVNQA----------WDAATGAK-GCREL 216 (381)
T ss_dssp HHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHHTCTTCEEEEECTTC----------BCHHHHHH-HHHHH
T ss_pred hHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHHcCCCCeEEEECCCC----------CCHHHHHH-HHHHH
Confidence 4444445556665 689988643211100122223345555222344444433221 23433332 23455
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCc-cEEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cchH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~l 197 (235)
+.+++ .++..|-+. +.++.+.++++.-.| -..|=|-++..++.++++...++++|+..+-.-.-. -..+
T Consensus 217 ~~~~i-----~~iEeP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i 287 (381)
T 3fcp_A 217 AAMGV-----DLIEQPVSA----HDNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLAL 287 (381)
T ss_dssp HHTTC-----SEEECCBCT----TCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHH
T ss_pred hhcCc-----cceeCCCCc----ccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 56554 455555332 236777777776444 334556788999999998888999999765543211 2678
Q ss_pred HHHHHHhCCeEEecccCc
Q 026625 198 VPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (235)
.+.|+++|+.++..+.+.
T Consensus 288 a~~A~~~gi~~~~~~~~e 305 (381)
T 3fcp_A 288 ARVAQAAGIGLYGGTMLE 305 (381)
T ss_dssp HHHHHHHTCEEEECCSCC
T ss_pred HHHHHHcCCceecCCCCc
Confidence 999999999998766553
|
| >3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A* | Back alignment and structure |
|---|
Probab=85.83 E-value=3.9 Score=35.35 Aligned_cols=155 Identities=10% Similarity=-0.004 Sum_probs=92.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC-------CCCC---------------C----------cHHHHHHHHHhcCCCCCEE
Q 026625 40 SEEDGISIIKHAFSKGITFFDTAD-------KYGP---------------Y----------TNEILLGKALKELPRENIQ 87 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~-------~Yg~---------------g----------~sE~~lG~al~~~~R~~~~ 87 (235)
+.++..+.++.+++.|++.|-.=- .||. + .....+=+++++.-.+++-
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G~d~~ 222 (418)
T 3r4e_A 143 DIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYGFDHH 222 (418)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCe
Confidence 567888888999999999886311 1221 0 0112222455541122444
Q ss_pred EEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCC
Q 026625 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEAS 166 (235)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~ 166 (235)
|.-.... ..+.+...+ +-+.|+.+++++ ++.|-.. +.++.+.++++.-.|.-. |=+-++
T Consensus 223 l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~ 282 (418)
T 3r4e_A 223 LLHDGHH----------RYTPQEAAN-LGKMLEPYQLFW-----LEDCTPA----ENQEAFRLVRQHTVTPLAVGEIFNT 282 (418)
T ss_dssp EEEECTT----------CSCHHHHHH-HHHHHGGGCCSE-----EESCSCC----SSGGGGHHHHHHCCSCEEECTTCCS
T ss_pred EEEeCCC----------CCCHHHHHH-HHHHHHhhCCCE-----EECCCCc----cCHHHHHHHHhcCCCCEEEcCCcCC
Confidence 4433321 134444333 334566666544 4555332 235667777776555533 335577
Q ss_pred HHHHHHHHhcCCeeEEeeccCccccccc-chHHHHHHHhCCeEEecccC
Q 026625 167 PDTIRRAHAVHPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~spl 214 (235)
.++++++++...++++|+..+-.-.-.+ ..+...|+++|+.++..+++
T Consensus 283 ~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 283 IWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 8899999988889999998765432112 67899999999999988875
|
| >4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii} | Back alignment and structure |
|---|
Probab=85.81 E-value=6.1 Score=33.94 Aligned_cols=154 Identities=12% Similarity=0.039 Sum_probs=91.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC--CCCC--C--------cHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCC
Q 026625 40 SEEDGISIIKHAFSKGITFFDTAD--KYGP--Y--------TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~--~Yg~--g--------~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~ 107 (235)
+.++..+..+.+++.|++.|..=. .|.. | ......=+++++.-.+++-|.-.... ..+
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~----------~~~ 220 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHG----------QFT 220 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCC----------CcC
Confidence 567778888899999999997632 1110 0 01112233455411234444444321 123
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCCHHHHHHHHhcCCeeEEeecc
Q 026625 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEW 186 (235)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~~~~l~~~~~~~~~~~~q~~~ 186 (235)
.+...+ +-+.|+.+++++ +..|-.. +.++.+.++++.-.|.-. |=+-++.++++++++....+++|+..
T Consensus 221 ~~~A~~-~~~~l~~~~i~~-----iEeP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 221 VSGAKR-LARRLEAYDPLW-----FEEPIPP----EKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp HHHHHH-HHHHHGGGCCSE-----EECCSCT----TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred HHHHHH-HHHHHhhcCCcE-----EECCCCc----ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 443332 334566666544 4555332 246677788776555433 33557788999999888899999987
Q ss_pred Cccccccc-chHHHHHHHhCCeEEeccc
Q 026625 187 SLWARDIE-NEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 187 n~~~~~~~-~~l~~~~~~~gi~v~a~sp 213 (235)
+-.-.-.+ ..+.+.|+++|+.+...+.
T Consensus 291 ~~~GGit~~~~ia~~A~~~gi~~~~h~~ 318 (404)
T 4e5t_A 291 GRVGGLLEAKKIAAMAECHSAQIAPHLY 318 (404)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCEECCCCS
T ss_pred cccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 66532212 6789999999999876653
|
| >3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A* | Back alignment and structure |
|---|
Probab=85.59 E-value=5 Score=34.28 Aligned_cols=79 Identities=11% Similarity=0.027 Sum_probs=54.9
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHc-----CCccEEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chHHHH
Q 026625 127 IDLYYQHRVDTSVPIEETIGEMKKLVEE-----GKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEIVPL 200 (235)
Q Consensus 127 iDl~~lh~~~~~~~~~~~~~~l~~l~~~-----G~ir~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l~~~ 200 (235)
.++.++..|-+ +.++.+.++++. -.|.-.+--.++.+.++++++....+++|+..+-. .-.+ ..+.+.
T Consensus 227 ~~i~~iE~P~~-----~d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik~~~~-Git~~~~i~~~ 300 (392)
T 3p3b_A 227 VNLYWLEEAFH-----EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRGRVDVLQYDIIWP-GFTHWMELGEK 300 (392)
T ss_dssp SCEEEEECSSS-----CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTTSCCEECCBTTTB-CHHHHHHHHHH
T ss_pred cCCCEEecCCc-----ccHHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHcCCCCEEEeCcccc-CHHHHHHHHHH
Confidence 45667776643 345666666665 34443332255678888899888899999987776 4222 678999
Q ss_pred HHHhCCeEEec
Q 026625 201 CRELGIGIVPY 211 (235)
Q Consensus 201 ~~~~gi~v~a~ 211 (235)
|+++|+.++..
T Consensus 301 A~~~gi~~~~h 311 (392)
T 3p3b_A 301 LDAHGLRSAPH 311 (392)
T ss_dssp HHHTTCEECCB
T ss_pred HHHcCCEEEec
Confidence 99999998886
|
| >3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A | Back alignment and structure |
|---|
Probab=85.46 E-value=8.8 Score=32.89 Aligned_cols=154 Identities=14% Similarity=0.167 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC-CCC-------------CC---------cHHHHHHHHHhcCCCCCEEEEecccccc
Q 026625 40 SEEDGISIIKHAFSKGITFFDTAD-KYG-------------PY---------TNEILLGKALKELPRENIQVATKFGFVE 96 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~-~Yg-------------~g---------~sE~~lG~al~~~~R~~~~I~tK~~~~~ 96 (235)
+.++..+.++.+++.|++.|-.=- .++ .| +.....=+++++.-.+++-|.-....
T Consensus 133 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~-- 210 (401)
T 3sbf_A 133 TMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHE-- 210 (401)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 567888888999999999886311 011 01 01122224555411234444444321
Q ss_pred CCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHh
Q 026625 97 LGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHA 175 (235)
Q Consensus 97 ~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~ 175 (235)
..+.+...+ +-+.|+.+++++| ..|-+. +.++.+.++++.-.|. ..|=+-++..+++++++
T Consensus 211 --------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 272 (401)
T 3sbf_A 211 --------RLFPNQAIQ-FAKEVEQYKPYFI-----EDILPP----NQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIA 272 (401)
T ss_dssp --------CSCHHHHHH-HHHHHGGGCCSCE-----ECSSCT----TCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHH
T ss_pred --------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCCh----hHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHh
Confidence 134443333 3345667766544 445332 2356677777764454 33446688999999999
Q ss_pred cCCeeEEeeccCccccccc-chHHHHHHHhCCeEEeccc
Q 026625 176 VHPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCP 213 (235)
Q Consensus 176 ~~~~~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~sp 213 (235)
...++++|+..+-.-.-.+ ..+...|+++|+.+...++
T Consensus 273 ~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~ 311 (401)
T 3sbf_A 273 NRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCA 311 (401)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCC
T ss_pred cCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 8889999998765432212 6789999999999987776
|
| >3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A* | Back alignment and structure |
|---|
Probab=84.93 E-value=19 Score=31.37 Aligned_cols=152 Identities=13% Similarity=0.211 Sum_probs=90.3
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHH
Q 026625 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (235)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 116 (235)
.+.++..+..+.+++. |++.|=.=-...+...+...=+++++ .+.-++.|=.--+ .+.+.. .
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~~d~~L~vDaN~~------------w~~~~A----i 255 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVFAPEEEMAAVEALRAAFPDHPLRLDPNAA------------WTPQTS----V 255 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHCTTSCEEEECTTC------------SCHHHH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHhCCCCcEEEECCCC------------CCHHHH----H
Confidence 4677778888888875 99987542211110122222345555 4222333322211 233322 2
Q ss_pred HHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCc-cEEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-c
Q 026625 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-E 194 (235)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~ 194 (235)
+.++.|. + + +.++..|-+ .++.+.++++.-.| -+.|=|.++..++.++++...++++|+..+-.-.-. -
T Consensus 256 ~~~~~L~-~-~-l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~GGitea 326 (445)
T 3vdg_A 256 KVAAGLE-G-V-LEYLEDPTP------GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRS 326 (445)
T ss_dssp HHHHHTT-T-T-CSEEECCSS------SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHh-h-H-HHeeeCCCC------CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCcceeCCHHHH
Confidence 3445553 3 3 677777732 35677777776433 345667788889999998888999999654433211 2
Q ss_pred chHHHHHHHhCCeEEecccCc
Q 026625 195 NEIVPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 195 ~~l~~~~~~~gi~v~a~spl~ 215 (235)
..+...|+++|+.+...+...
T Consensus 327 ~kia~lA~~~gv~v~~h~~~e 347 (445)
T 3vdg_A 327 RLLAGICDTFGLGLSMHSNSH 347 (445)
T ss_dssp HHHHHHHHHHTCEEEECCCSC
T ss_pred HHHHHHHHHcCCEEEEeCCcc
Confidence 678999999999999887653
|
| >2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1 | Back alignment and structure |
|---|
Probab=84.79 E-value=12 Score=31.51 Aligned_cols=158 Identities=8% Similarity=0.027 Sum_probs=91.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+..+.+.+.|++.|=.--...+-..+...=+++++.-.+++.|..-... ..+.+...+ +-+.|
T Consensus 143 ~~~~~~~~~~~~~~~g~~~~K~Kvg~~~~~~d~~~v~avr~~~g~~~~l~vDaN~----------~~~~~~A~~-~~~~l 211 (370)
T 2chr_A 143 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQ----------AWDEQVASV-YIPEL 211 (370)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHHHHHHHHTTTTSEEEEECTT----------CCCTHHHHH-HHHHH
T ss_pred hhhhHHHHHHHHhhcccceeecccccCChHHHHHHHHHHHHhcCCCcEEEecCCC----------CCCHHHHHH-HHHHH
Confidence 4566677777778889987754432221111122223444422233333322211 123333222 22334
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l 197 (235)
+. .++.++..|-... -++.+.+|++.-.|. ..|=|-++..++.++++...++++|+...-.-.-.+ ..+
T Consensus 212 ~~-----~~~~~iEeP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~i 282 (370)
T 2chr_A 212 EA-----LGVELIEQPVGRE----NTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKI 282 (370)
T ss_dssp HT-----TTCCEEECCSCSS----CHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHH
T ss_pred Hh-----cCCceecCCCChh----hhhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHH
Confidence 43 4566777775433 356778888776554 445577889999999988888999987654332112 678
Q ss_pred HHHHHHhCCeEEecccCccc
Q 026625 198 VPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (235)
...|+++|+.++..+.+..+
T Consensus 283 a~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 283 AAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHTCEECCCCCSCCH
T ss_pred HHHHHHcCCeEEeCCCcccH
Confidence 99999999999877666443
|
| >1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A* | Back alignment and structure |
|---|
Probab=84.45 E-value=9 Score=33.01 Aligned_cols=95 Identities=13% Similarity=0.039 Sum_probs=65.7
Q ss_pred HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-----CCc-cEEEeCCCCHHHHHHHHhcCCeeEEeeccCcccc
Q 026625 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-----GKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR 191 (235)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-----G~i-r~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~ 191 (235)
.|+.++.. +++ ++..|-+.....+-++.+.+|.++ -.| -..|=|.++..++.++++...++++|+..+-+-.
T Consensus 260 ~L~~~~~~-~~l-~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GG 337 (413)
T 1kko_A 260 SLEKEAQG-LPL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPDLGG 337 (413)
T ss_dssp HTGGGGTT-SCE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEECGGGGSS
T ss_pred HHHhccCC-cce-EEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCC
Confidence 34444432 565 777774432234678888888776 333 2334466789999999988889999998766443
Q ss_pred ccc-chHHHHHHHhCCeEEecccC
Q 026625 192 DIE-NEIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 192 ~~~-~~l~~~~~~~gi~v~a~spl 214 (235)
-.+ ..+...|+++|+.++..+..
T Consensus 338 itea~~i~~~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 338 IHNIVDAVLYCNKHGMEAYQGGTC 361 (413)
T ss_dssp THHHHHHHHHHHHHTCEEEECCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCCC
Confidence 222 67999999999999987764
|
| >2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A | Back alignment and structure |
|---|
Probab=84.21 E-value=11 Score=32.89 Aligned_cols=96 Identities=16% Similarity=0.120 Sum_probs=69.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCC--CCHHHHHHHHhcCCeeEEe
Q 026625 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE--ASPDTIRRAHAVHPITAVQ 183 (235)
Q Consensus 106 ~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn--~~~~~l~~~~~~~~~~~~q 183 (235)
.+++...+.+.+.++.+ +++++..|-+.. -|+.+.+|.++.+|.-+|=-. .++..+.++++..-.+++|
T Consensus 270 ~t~~e~~~~~~~ll~~y-----~i~~IEdPl~~d----D~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 340 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDY-----PVVSIEDPFDQD----DWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLL 340 (439)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTT----CHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CCcEEECCCCcc----cHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEE
Confidence 35666556666666654 578888885543 378888888888877666443 3889999999988889999
Q ss_pred eccCccccccc-chHHHHHHHhCCeEEe
Q 026625 184 LEWSLWARDIE-NEIVPLCRELGIGIVP 210 (235)
Q Consensus 184 ~~~n~~~~~~~-~~l~~~~~~~gi~v~a 210 (235)
+..|-+-.-.+ .++.+.|+++|+.++.
T Consensus 341 iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 341 LKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 97765433222 5789999999998755
|
| >3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=83.74 E-value=13 Score=32.43 Aligned_cols=96 Identities=11% Similarity=0.094 Sum_probs=68.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-CCccEEEe--CCCCHHHHHHHHhcCCeeEE
Q 026625 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGL--SEASPDTIRRAHAVHPITAV 182 (235)
Q Consensus 106 ~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGv--Sn~~~~~l~~~~~~~~~~~~ 182 (235)
.+++.+.+-.++.++.. +++++..|-...+ |+.+.+|.++ |+|.-+|= ...+++.++++++....+++
T Consensus 279 ~t~~elid~y~~lle~y-----pI~~IEDPl~~dD----~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~I 349 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKHY-----PIASIEDPFAEDD----WAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSV 349 (441)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESCSCTTC----HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEE
T ss_pred cCHHHHHHHHHHHhhhc-----ceeeecCCCChHH----HHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEE
Confidence 46777777777777754 4788888865544 4555555544 35766663 34579999999988888899
Q ss_pred eeccCccccccc-chHHHHHHHhCCeEEe
Q 026625 183 QLEWSLWARDIE-NEIVPLCRELGIGIVP 210 (235)
Q Consensus 183 q~~~n~~~~~~~-~~l~~~~~~~gi~v~a 210 (235)
|+..|-+-.-.+ .++...|+++|+.++.
T Consensus 350 lIKvnqiGGITEalkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 350 LIKVNQIGTLTETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp EECGGGTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EecccccccHHHHHHHHHHHHHcCCeEEE
Confidence 998775544222 5788999999999774
|
| >4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified} | Back alignment and structure |
|---|
Probab=83.66 E-value=20 Score=30.74 Aligned_cols=153 Identities=11% Similarity=0.033 Sum_probs=91.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC--CCC--C--------cHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCC
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADK--YGP--Y--------TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~--Yg~--g--------~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~ 107 (235)
+.++..+..+.+++.|++.|-.-.. |.. | ......=+++++.-.+++-|.-..... .+
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~----------~~ 213 (412)
T 4e4u_A 144 DPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQ----------MV 213 (412)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSC----------BC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCC----------CC
Confidence 5677888888999999999876321 110 0 011122234554212344444443221 24
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCCHHHHHHHHhcCCeeEEeecc
Q 026625 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEW 186 (235)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~~~~l~~~~~~~~~~~~q~~~ 186 (235)
.+...+ +-+.|+.++++ ++..|-+. +.++.+.++++.-.|.-. |=|-++..+++++++....+++|+..
T Consensus 214 ~~~A~~-~~~~L~~~~i~-----~iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 283 (412)
T 4e4u_A 214 PSSAIR-LAKRLEKYDPL-----WFEEPVPP----GQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNV 283 (412)
T ss_dssp HHHHHH-HHHHHGGGCCS-----EEECCSCS----SCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred HHHHHH-HHHHhhhcCCc-----EEECCCCh----hhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCc
Confidence 443332 33456666654 44555332 236778888877555433 33557788999999988899999987
Q ss_pred Cccccccc-chHHHHHHHhCCeEEecc
Q 026625 187 SLWARDIE-NEIVPLCRELGIGIVPYC 212 (235)
Q Consensus 187 n~~~~~~~-~~l~~~~~~~gi~v~a~s 212 (235)
+-.-.-.+ ..+...|+++|+.+...+
T Consensus 284 ~~~GGit~~~kia~~A~~~gi~v~~h~ 310 (412)
T 4e4u_A 284 ARVGGLLEAKKIATLAEVHYAQIAPHL 310 (412)
T ss_dssp TTTTSHHHHHHHHHHHHHTTCEECCCC
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 65432112 678999999999987664
|
| >1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A | Back alignment and structure |
|---|
Probab=83.60 E-value=4.5 Score=31.45 Aligned_cols=64 Identities=13% Similarity=0.210 Sum_probs=42.1
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-CCCCHHHHHHHHhcCCeeEEeec
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLE 185 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-Sn~~~~~l~~~~~~~~~~~~q~~ 185 (235)
..+|.|++=+++.-........+.+ ..|.+.. ...+..+|| .|.+.+.+.++.+...++++|++
T Consensus 19 ~~~GaD~iGfif~~~SpR~V~~~~a-~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 19 VESGADAVGFVFYPKSKRYISPEDA-RRISVEL-PPFVFRVGVFVNEEPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp HHHTCSEEEEECCTTCTTBCCHHHH-HHHHHHS-CSSSEEEEEESSCCHHHHHHHHHHHTCSEEEEC
T ss_pred HHcCCCEEEEEecCCCCCcCCHHHH-HHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC
Confidence 4789999988853211122344333 2232221 246889999 46788999999888899999996
|
| >4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.35 E-value=22 Score=30.89 Aligned_cols=152 Identities=9% Similarity=0.051 Sum_probs=89.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+..+.+++.|++.|-.=-.-. -..+...=+++++.-.+++-|.-..... .+.+...+ +-+.|
T Consensus 201 ~~e~~~~~a~~~~~~Gf~~~KlKvG~~-~~~d~~~v~avR~a~G~~~~l~vDaN~~----------~~~~~A~~-~~~~L 268 (441)
T 4a35_A 201 SDDTLKQLCAQALKDGWTRFKVKVGAD-LQDDMRRCQIIRDMIGPEKTLMMDANQR----------WDVPEAVE-WMSKL 268 (441)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSC-HHHHHHHHHHHHHHHCTTSEEEEECTTC----------CCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCC-HHHHHHHHHHHHHHhCCCCeEEEECCCC----------CCHHHHHH-HHHhh
Confidence 678888888999999999986432111 0122222244554111233333332211 23333222 22234
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHH----cCCccEEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE----EGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE- 194 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~----~G~ir~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~- 194 (235)
+. .+++++..|-...+ ++.+.++++ .+.=-..|=+.++..++.++++...++++|+..+-.-.-.+
T Consensus 269 ~~-----~~~~~iEeP~~~~d----~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d~~~~GGit~~ 339 (441)
T 4a35_A 269 AK-----FKPLWIEEPTSPDD----ILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNEN 339 (441)
T ss_dssp GG-----GCCSEEECCSCTTC----HHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCCTTTSSHHHHH
T ss_pred cc-----cCccEEeCCCCccc----HHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEECccccCCHHHH
Confidence 43 45667777744332 455555555 34444556677899999999998889999997765432112
Q ss_pred chHHHHHHHhCCeEEecc
Q 026625 195 NEIVPLCRELGIGIVPYC 212 (235)
Q Consensus 195 ~~l~~~~~~~gi~v~a~s 212 (235)
..+...|+++|+.+...+
T Consensus 340 ~kia~lA~~~gv~v~~H~ 357 (441)
T 4a35_A 340 LSVLLMAKKFEIPVCPHA 357 (441)
T ss_dssp HHHHHHHHHTTCCBCCCC
T ss_pred HHHHHHHHHcCCEEEEeC
Confidence 678999999999987543
|
| >3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A | Back alignment and structure |
|---|
Probab=83.21 E-value=18 Score=31.39 Aligned_cols=152 Identities=18% Similarity=0.233 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHHHH-cCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHH
Q 026625 39 LSEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (235)
Q Consensus 39 ~~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 116 (235)
.+.++..+..+.+++ .|++.|=.=-...+...+...=+++++ .+.-++.|=..-+ .+.+.. .
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~pd~~L~vDaN~~------------w~~~~A----i 250 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAFPGLPLRLDPNAA------------WTVETS----I 250 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHSTTCCEEEECTTC------------SCHHHH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCCCcEeccCCCC------------CCHHHH----H
Confidence 467777788888887 499987542111110122222345555 4222333322211 233322 2
Q ss_pred HHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCc-cEEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-c
Q 026625 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-E 194 (235)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~ 194 (235)
+.++.|. + + +.++..|-+ .++.+.++++.-.| -+.|=|.++..++.++++...++++|+..+-.-.-. -
T Consensus 251 ~~~~~L~-~-~-l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGitea 321 (441)
T 3vc5_A 251 RVGRALD-G-V-LEYLEDPTP------GIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRS 321 (441)
T ss_dssp HHHHHTT-T-T-CSEEECCSS------SHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHH-H-H-HHHhhccCC------CHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHHHH
Confidence 3445554 3 3 677777732 35677777765333 345667788899999988888899998654332111 2
Q ss_pred chHHHHHHHhCCeEEecccCc
Q 026625 195 NEIVPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 195 ~~l~~~~~~~gi~v~a~spl~ 215 (235)
..+...|+++|+.+...+...
T Consensus 322 ~kia~lA~~~gv~v~~h~~~e 342 (441)
T 3vc5_A 322 AHIATLCATFGIELSMHSNSH 342 (441)
T ss_dssp HHHHHHHHHTTCEEEECCCSC
T ss_pred HHHHHHHHHcCCEEEecCCcc
Confidence 678999999999999887653
|
| >3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A | Back alignment and structure |
|---|
Probab=83.17 E-value=18 Score=31.18 Aligned_cols=155 Identities=11% Similarity=0.009 Sum_probs=92.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeC--CC-----CCCC---------------C----------cHHHHHHHHHhcCCCCCEE
Q 026625 40 SEEDGISIIKHAFSKGITFFDT--AD-----KYGP---------------Y----------TNEILLGKALKELPRENIQ 87 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dt--A~-----~Yg~---------------g----------~sE~~lG~al~~~~R~~~~ 87 (235)
+.++..+.++.+++.|++.|=. .. .||. + .....+=+++++.-.+++-
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG~d~~ 228 (424)
T 3v3w_A 149 DLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFGPDIH 228 (424)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCc
Confidence 5678888889999999997742 21 2221 1 0112222455541112344
Q ss_pred EEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCC
Q 026625 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEAS 166 (235)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~ 166 (235)
|.-.... ..+.+...+ +-+.|+.+++++ ++.|-+. +.++.+.++++.-.|--. |=+-++
T Consensus 229 l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~ 288 (424)
T 3v3w_A 229 LLHDVHH----------RLTPIEAAR-LGKALEPYHLFW-----MEDAVPA----ENQESFKLIRQHTTTPLAVGEVFNS 288 (424)
T ss_dssp EEEECTT----------CCCHHHHHH-HHHHHGGGCCSE-----EECCSCC----SSTTHHHHHHHHCCSCEEECTTCCS
T ss_pred EEEeCCC----------CCCHHHHHH-HHHHHHhcCCCE-----EECCCCh----HhHHHHHHHHhhCCCCEEEccCcCC
Confidence 4433321 134443333 334566666544 4555332 235567777776555433 335577
Q ss_pred HHHHHHHHhcCCeeEEeeccCccccccc-chHHHHHHHhCCeEEecccC
Q 026625 167 PDTIRRAHAVHPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~spl 214 (235)
..+++++++....+++|+..+-+-.-.+ ..+...|+++|+.++..+++
T Consensus 289 ~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 337 (424)
T 3v3w_A 289 IHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGAT 337 (424)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCT
T ss_pred HHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 8899999988889999998765432112 67899999999999988874
|
| >3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A | Back alignment and structure |
|---|
Probab=83.14 E-value=17 Score=30.81 Aligned_cols=155 Identities=10% Similarity=0.003 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHH-cCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 41 EEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 41 ~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
.++..+-...+++ .|++.|-.=-.-.+-..+...=+++++.-.+++.|.-..... .+.+...+ +-+.|
T Consensus 149 ~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~----------~~~~~A~~-~~~~l 217 (382)
T 3dgb_A 149 TAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKALGDSASVRVDVNQA----------WDEAVALR-ACRIL 217 (382)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHHGGGSEEEEECTTC----------BCHHHHHH-HHHHH
T ss_pred hHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHcCCCCeEEEeCCCC----------CCHHHHHH-HHHHH
Confidence 4444455566666 699988643211100122223345554111233333332211 23333322 23455
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cchH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~l 197 (235)
+.+++ .++..|-+. +.++.+.++++.-.|. ..|=|-++..++.++++...++++|+..+-.-.-. -..+
T Consensus 218 ~~~~i-----~~iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 288 (382)
T 3dgb_A 218 GGNGI-----DLIEQPISR----NNRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLRT 288 (382)
T ss_dssp HTTTC-----CCEECCBCT----TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcCc-----CeeeCCCCc----cCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 55554 445555332 2367777777764443 44556788999999998888899999765433211 2678
Q ss_pred HHHHHHhCCeEEecccCc
Q 026625 198 VPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~ 215 (235)
.+.|+++|+.++..+.+.
T Consensus 289 ~~~A~~~gi~~~~~~~~e 306 (382)
T 3dgb_A 289 AAIAEAAGIGLYGGTMLE 306 (382)
T ss_dssp HHHHHHHTCEEEECCSCC
T ss_pred HHHHHHcCCeEeecCCCc
Confidence 899999999998776554
|
| >1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A | Back alignment and structure |
|---|
Probab=81.74 E-value=22 Score=29.86 Aligned_cols=149 Identities=10% Similarity=0.074 Sum_probs=86.0
Q ss_pred HHHHHHHH-cCCCeEeCCCCCCCCcHHHHHHHHHhc-CCC-CCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHc
Q 026625 46 SIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKE-LPR-ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRL 122 (235)
Q Consensus 46 ~~l~~A~~-~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R-~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L 122 (235)
+-...+++ .|++.|-.=-...+-..+...=+++++ .+. -.+.| ..... .+.+...+ +-+.|+.+
T Consensus 148 ~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~~~g~~~~l~v--Dan~~----------~~~~~a~~-~~~~l~~~ 214 (370)
T 1chr_A 148 DSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRV--DVNQA----------WDEQVASV-YIPELEAL 214 (370)
T ss_dssp HHHHHHHHTTCCCEEEEECSSSCSHHHHHHHHHHHHHSSTTCCEEE--ECTTC----------CCTTHHHH-HTHHHHTT
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEE--ECCCC----------CCHHHHHH-HHHHHHhc
Confidence 33445555 899987643211111233333456666 332 24444 32211 12222221 22344444
Q ss_pred CCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chHHHH
Q 026625 123 DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEIVPL 200 (235)
Q Consensus 123 g~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l~~~ 200 (235)
++.++..|-.. +.++.+.++++.-.|. ..|=+-++..++.++++....+++|+..+-.-.-.+ ..+...
T Consensus 215 -----~i~~iEqP~~~----~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~ 285 (370)
T 1chr_A 215 -----GVELIEQPVGR----ENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAV 285 (370)
T ss_dssp -----TEEEEECCSCT----TCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHH
T ss_pred -----CCCEEECCCCc----ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHH
Confidence 45566666433 2367777787765554 334466889999999988889999998765432112 678999
Q ss_pred HHHhCCeEEecccCcc
Q 026625 201 CRELGIGIVPYCPLGR 216 (235)
Q Consensus 201 ~~~~gi~v~a~spl~~ 216 (235)
|+++|+.++..+.+..
T Consensus 286 A~~~g~~~~~~~~~es 301 (370)
T 1chr_A 286 AEASGIASYGGTMLDS 301 (370)
T ss_dssp HHHHTCEEEECCSCCT
T ss_pred HHHcCCeEEecCCCcc
Confidence 9999999987765543
|
| >3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199} | Back alignment and structure |
|---|
Probab=81.55 E-value=3.9 Score=35.00 Aligned_cols=155 Identities=10% Similarity=0.002 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHHHc---CCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSK---GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~---Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 116 (235)
+.++..+.++.+++. |++.|-.=-...+-..+...=+++++.-.+++-|.-.... ..+.+...+ +-
T Consensus 171 ~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~ 239 (390)
T 3ugv_A 171 PAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGRDTALMVDFNQ----------GLDMAEAMH-RT 239 (390)
T ss_dssp HHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHH-HH
Confidence 567777888888999 9998864321111012233334555511223444433321 123433322 22
Q ss_pred HHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-c
Q 026625 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-E 194 (235)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~ 194 (235)
+.|+.++ +.++..|-+. +.++.+.++++.-.|. ..|=|-++..++.++++...++++|+..+-.-.-. -
T Consensus 240 ~~l~~~~-----i~~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~ 310 (390)
T 3ugv_A 240 RQIDDLG-----LEWIEEPVVY----DNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGW 310 (390)
T ss_dssp HHHTTSC-----CSEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHH
T ss_pred HHHHhhC-----CCEEECCCCc----ccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 3444544 4455555432 2356777777764443 44556788999999999888999998765432211 1
Q ss_pred chHHHHHHHhCCeEEecccC
Q 026625 195 NEIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 195 ~~l~~~~~~~gi~v~a~spl 214 (235)
..+.+.|+++|+.+...+.+
T Consensus 311 ~~i~~~A~~~gi~~~~h~~~ 330 (390)
T 3ugv_A 311 MRAAGVAGAWGIPMSTHLYP 330 (390)
T ss_dssp HHHHHHHHHHTCCBCCBSCH
T ss_pred HHHHHHHHHcCCEEeecCHH
Confidence 57899999999999876654
|
| >1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=81.05 E-value=4.4 Score=33.13 Aligned_cols=103 Identities=12% Similarity=0.019 Sum_probs=64.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhcCCeeEEeec
Q 026625 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (235)
Q Consensus 106 ~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~~~~~~q~~ 185 (235)
++.+... .+-+.|..+|+++|.+-....+.....+.+.++.++.+.+...++...+. -+.+.++++.+. .++.+.+.
T Consensus 23 ~~~e~k~-~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~-G~~~V~i~ 99 (295)
T 1ydn_A 23 VPTADKI-ALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAA-HADEIAVF 99 (295)
T ss_dssp CCHHHHH-HHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHT-TCSEEEEE
T ss_pred cCHHHHH-HHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHC-CCCEEEEE
Confidence 4555544 45567788999998887654443211133567777777665567766665 567888888775 34455554
Q ss_pred cCcc--------ccccc------chHHHHHHHhCCeEEec
Q 026625 186 WSLW--------ARDIE------NEIVPLCRELGIGIVPY 211 (235)
Q Consensus 186 ~n~~--------~~~~~------~~l~~~~~~~gi~v~a~ 211 (235)
.+.- .+..+ .+.+++|+++|+.|.++
T Consensus 100 ~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~ 139 (295)
T 1ydn_A 100 ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGY 139 (295)
T ss_dssp EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 3221 11111 45689999999998744
|
| >3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A | Back alignment and structure |
|---|
Probab=80.85 E-value=4.8 Score=32.45 Aligned_cols=158 Identities=14% Similarity=-0.006 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCCCCC---cHHHHHHHHHhc---C---CCCCEEEEeccccccCCCcccccCCCHH
Q 026625 39 LSEEDGISIIKHAFSKGITFFDTADKYGPY---TNEILLGKALKE---L---PRENIQVATKFGFVELGFTSVIVKGTPE 109 (235)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g---~sE~~lG~al~~---~---~R~~~~I~tK~~~~~~~~~~~~~~~~~~ 109 (235)
.+.+++.++++.|.+.|++.|=.++++-.+ .+...+-+.+++ . ...++.| ..|.. ....++
T Consensus 17 ~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I--~~G~E--------v~~~~~ 86 (262)
T 3qy7_A 17 GDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHV--LPGQE--------IRIYGE 86 (262)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEE--ECCCE--------EECCTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEE--ecCeE--------Eecchh
Confidence 477889999999999999999888887432 112222222222 1 1122322 22221 122333
Q ss_pred HHHHHHHH-HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCC------CCHHHHHHHHhcCCeeEE
Q 026625 110 YVRSCCEA-SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAV 182 (235)
Q Consensus 110 ~i~~~~~~-sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn------~~~~~l~~~~~~~~~~~~ 182 (235)
.. ..+++ ++-.|+ --|.+++..|.... .....+.+.++.+.|.+--||=-. ...+.+.++.+.+ ..+
T Consensus 87 ~~-~~l~~~~~~~l~--~~~~vl~e~~~~~~-~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G--~~i 160 (262)
T 3qy7_A 87 VE-QDLAKRQLLSLN--DTKYILIEFPFDHV-PRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKG--AAS 160 (262)
T ss_dssp HH-HHHHTTCSCCGG--GSSEEEEECCTTCC-CTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTT--CEE
T ss_pred HH-HHHhcCCCcEEC--CceEEEEeCCCccC-HHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCC--CEE
Confidence 22 22332 222232 22567777664332 346788888899999887776432 1234566665554 357
Q ss_pred eeccCcccccc---cchHHHHHHHhCCeEEecc
Q 026625 183 QLEWSLWARDI---ENEIVPLCRELGIGIVPYC 212 (235)
Q Consensus 183 q~~~n~~~~~~---~~~l~~~~~~~gi~v~a~s 212 (235)
|++.+.+.... .......|.++|+.+..-|
T Consensus 161 EiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igS 193 (262)
T 3qy7_A 161 QITSGSLAGIFGKQLKAFSLRLVEANLIHFVAS 193 (262)
T ss_dssp EEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEEC
T ss_pred EEECCccCcccchHHHHHHHHHHhCCCeEEEEc
Confidence 88766554311 2456777778888766433
|
| >3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A* | Back alignment and structure |
|---|
Probab=80.58 E-value=23 Score=30.38 Aligned_cols=150 Identities=9% Similarity=0.029 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC---------CC--CCC----c----H------HHHHHHHHhcCCCCCEEEEecccc
Q 026625 40 SEEDGISIIKHAFSKGITFFDTAD---------KY--GPY----T----N------EILLGKALKELPRENIQVATKFGF 94 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~---------~Y--g~g----~----s------E~~lG~al~~~~R~~~~I~tK~~~ 94 (235)
+.++..+..+.+++.|++.|=.=- .| |.+ . . ....=+++++.-.+++-|.-....
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN~ 222 (409)
T 3go2_A 143 DLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLNF 222 (409)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 678888888999999999875321 01 111 0 0 012234555411233444444321
Q ss_pred ccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EeCCCCHHHHHHH
Q 026625 95 VELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRA 173 (235)
Q Consensus 95 ~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-GvSn~~~~~l~~~ 173 (235)
..+.+...+ +-+.|+.+++++ ++.|. ..++.+.++++.-.|.-. |=|-++.++++++
T Consensus 223 ----------~~~~~~A~~-~~~~L~~~~i~~-----iE~P~------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 280 (409)
T 3go2_A 223 ----------NAKPEGYLK-ILRELADFDLFW-----VEIDS------YSPQGLAYVRNHSPHPISSCETLFGIREFKPF 280 (409)
T ss_dssp ----------CSCHHHHHH-HHHHTTTSCCSE-----EECCC------SCHHHHHHHHHTCSSCEEECTTCCHHHHHHHH
T ss_pred ----------CCCHHHHHH-HHHHHhhcCCeE-----EEeCc------CCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHH
Confidence 124433322 223445555544 44443 146667888877555533 3355778899999
Q ss_pred HhcCCeeEEeeccCccccccc-chHHHHHHHhCCeEEecc
Q 026625 174 HAVHPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYC 212 (235)
Q Consensus 174 ~~~~~~~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~s 212 (235)
++....+++|+..+- -.-.+ ..+...|+++|+.++..+
T Consensus 281 i~~~~~d~v~~k~~~-GGit~~~~ia~~A~~~gi~~~~h~ 319 (409)
T 3go2_A 281 FDANAVDVAIVDTIW-NGVWQSMKIAAFADAHDINVAPHN 319 (409)
T ss_dssp HHTTCCSEEEECHHH-HCHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHhCCCCEEEeCCCC-CCHHHHHHHHHHHHHcCCEEeecC
Confidence 998889999998754 21111 578999999999998654
|
| >4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A | Back alignment and structure |
|---|
Probab=80.23 E-value=15 Score=31.59 Aligned_cols=84 Identities=12% Similarity=0.125 Sum_probs=59.3
Q ss_pred ccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-chHHHHHHHh
Q 026625 127 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEIVPLCREL 204 (235)
Q Consensus 127 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~l~~~~~~~ 204 (235)
.+++++..|-+. +-++.+.+|+++-.|. ..|=+.++..++.++++....+++|+..+-.-.-.+ ..+.+.|+++
T Consensus 247 ~~i~~iEeP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGite~~~ia~~A~~~ 322 (421)
T 4hnl_A 247 YQLFFLEDILPP----DQSHWLTQLRSQSATPIATGELFNNPMEWQELVKNRQIDFMRAHVSQIGGITPALKLAHFCDAM 322 (421)
T ss_dssp GCCSEEECCSCG----GGGGGHHHHHTTCCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHT
T ss_pred hhhcccccCCcc----cchHHHHHHHhcCCCCeecCcceehhHHHHHHHhcCCceEEEeCCCCCCCHHHHHHHHHHHHHC
Confidence 355666666332 3467777887764443 445567888999999998889999998765432112 6789999999
Q ss_pred CCeEEecccC
Q 026625 205 GIGIVPYCPL 214 (235)
Q Consensus 205 gi~v~a~spl 214 (235)
|+.+...++.
T Consensus 323 gi~v~~h~~~ 332 (421)
T 4hnl_A 323 GVRIAWHTPS 332 (421)
T ss_dssp TCEECCCCCS
T ss_pred CCeEEEeCCc
Confidence 9999876654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 235 | ||||
| d1pyfa_ | 311 | c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillu | 1e-48 | |
| d1lqaa_ | 346 | c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: | 1e-47 | |
| d3eaua1 | 326 | c.1.7.1 (A:36-361) Voltage-dependent K+ channel be | 5e-42 | |
| d1pz1a_ | 333 | c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillu | 2e-36 | |
| d1s1pa_ | 315 | c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (ak | 4e-36 | |
| d1afsa_ | 319 | c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase | 3e-35 | |
| d1us0a_ | 314 | c.1.7.1 (A:) Aldose reductase (aldehyde reductase) | 7e-34 | |
| d1qwka_ | 312 | c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematod | 5e-33 | |
| d1hqta_ | 324 | c.1.7.1 (A:) Aldose reductase (aldehyde reductase) | 9e-33 | |
| d1mi3a_ | 319 | c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenu | 4e-32 | |
| d1vp5a_ | 284 | c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase | 6e-31 | |
| d1mzra_ | 274 | c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase | 5e-29 | |
| d1frba_ | 315 | c.1.7.1 (A:) FR-1 (fibroblast growth factor-induce | 1e-28 | |
| d1ur3m_ | 298 | c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Esc | 2e-28 | |
| d1gvea_ | 324 | c.1.7.1 (A:) Aflatoxin aldehyde reductase (akr7a1) | 9e-26 | |
| d1hw6a_ | 262 | c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase | 1e-23 |
| >d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus subtilis [TaxId: 1423]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase IolS species: Bacillus subtilis [TaxId: 1423]
Score = 160 bits (404), Expect = 1e-48
Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 2/213 (0%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSP-LSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
+ KLG L+V +G G ++ G P L+EE G +++ A G+T DTA YG
Sbjct: 2 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGR 61
Query: 70 NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
+E L+G+ L+E RE++ +ATK + G V +P++++ + SL+RL+ +YIDL
Sbjct: 62 SEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDN-SPDFLKKSVDESLKRLNTDYIDL 120
Query: 130 YYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLW 189
+Y H D P +E + + ++ + GKI+ IG+S S + ++ A+ + +Q E++L
Sbjct: 121 FYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLL 180
Query: 190 ARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
R+ E P +E I +PY PL G GK
Sbjct: 181 NREAEKTFFPYTKEHNISFIPYFPLVSGLLAGK 213
|
| >d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Tas protein species: Escherichia coli [TaxId: 562]
Score = 158 bits (399), Expect = 1e-47
Identities = 52/254 (20%), Positives = 87/254 (34%), Gaps = 38/254 (14%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
++ LEVS LG G M+ SE D + + +A ++GI D A+ Y
Sbjct: 4 HRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRP 59
Query: 72 ILLGKALKELPRE-----------NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120
G + + + +R SL+
Sbjct: 60 ETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLK 119
Query: 121 RLDVEYIDLYYQHRVDTSVPI-----------------EETIGEMKKLVEEGKIKYIGLS 163
RL +Y+DLY H +T+ + + GKI+YIG+S
Sbjct: 120 RLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVS 179
Query: 164 EASPDTIRRA------HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 217
+ + R H + I +Q +SL R E + + + G+ ++ Y LG G
Sbjct: 180 NETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFG 239
Query: 218 FFGGKAVVESVPLD 231
GK + + P
Sbjct: 240 TLTGKYLNGAKPAG 253
|
| >d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 326 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Voltage-dependent K+ channel beta subunit species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 143 bits (360), Expect = 5e-42
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 10/217 (4%)
Query: 13 KLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEI 72
LG GL VS LG G G +++E ++ A+ GI FDTA+ Y E+
Sbjct: 6 NLGKSGLRVSCLGLGTWVTFG---GQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEV 62
Query: 73 LLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQ 132
+LG +K+ + G + +++ +ASL RL +EY+D+ +
Sbjct: 63 VLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFA 122
Query: 133 HRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR------AHAVHPITAVQLEW 186
+R D + P+EET+ M ++ +G Y G S S I + P Q E+
Sbjct: 123 NRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEY 182
Query: 187 SLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
++ R+ +E ++ L ++G+G + + PL G GK
Sbjct: 183 HMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 219
|
| >d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus subtilis [TaxId: 1423]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase YhdN species: Bacillus subtilis [TaxId: 1423]
Score = 129 bits (323), Expect = 2e-36
Identities = 66/210 (31%), Positives = 106/210 (50%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
+ G+E S++G G ++ G E+ I I+ A +GIT DTA YG +E
Sbjct: 4 TSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSE 63
Query: 72 ILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYY 131
++GKA+KE + + + ++ + + E SL+RL +YIDLY
Sbjct: 64 EIVGKAIKEYMKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQ 123
Query: 132 QHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR 191
H D VPIEET MK+L + GKI+ IG+S S + + AV P+ +Q ++L+ R
Sbjct: 124 VHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFER 183
Query: 192 DIENEIVPLCRELGIGIVPYCPLGRGFFGG 221
++E ++P ++ I + Y L RG G
Sbjct: 184 EMEESVLPYAKDNKITTLLYGSLCRGLLTG 213
|
| >d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Prostaglandin d2 11-ketoreductase (akr1c3) species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (319), Expect = 4e-36
Identities = 45/234 (19%), Positives = 75/234 (32%), Gaps = 33/234 (14%)
Query: 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTN 70
VKL G + LG+G + + + + K A G D+A Y N
Sbjct: 2 CVKLND-GHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---N 52
Query: 71 EILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLY 130
E +G A++ + PE VR E SL++ ++Y+DLY
Sbjct: 53 EEQVGLAIRSKIADGSVKREDI---FYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLY 109
Query: 131 YQHRVDTSVP-------------------IEETIGEMKKLVEEGKIKYIGLSEASPDTIR 171
H + P + T M+K + G K IG+S + +
Sbjct: 110 LIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLE 169
Query: 172 RA--HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKA 223
V + ++++ C+ I +V Y LG
Sbjct: 170 MILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWV 223
|
| >d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 3-alpha-hydroxysteroid dehydrogenase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 125 bits (314), Expect = 3e-35
Identities = 50/235 (21%), Positives = 86/235 (36%), Gaps = 33/235 (14%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
RV L G + LG+G +++++ I K A G FD+A Y
Sbjct: 6 LRVALND-GNFIPVLGFGTT-----VPEKVAKDEVIKATKIAIDNGFRHFDSAYLYE--- 56
Query: 70 NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
E +G+A++ + K + PE VR+C E +L+ ++Y+DL
Sbjct: 57 VEEEVGQAIRSKIEDGT---VKREDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDL 113
Query: 130 YYQHR-------------------VDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTI 170
Y H + +V I +T M+K + G K IG+S + +
Sbjct: 114 YIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQL 173
Query: 171 RRA--HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKA 223
R V + +++++ C+ I +V YC LG
Sbjct: 174 ERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTLGSSRDKTWV 228
|
| >d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]} Length = 314 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 7e-34
Identities = 48/234 (20%), Positives = 79/234 (33%), Gaps = 36/234 (15%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
R+ L G ++ LG G +K A G D A Y
Sbjct: 3 SRILLNN-GAKMPILGLGTWKSP--------PGQVTEAVKVAIDVGYRHIDCAHVYQ--- 50
Query: 70 NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
NE +G A++E RE + K + + V+ C+ +L L ++Y+DL
Sbjct: 51 NENEVGVAIQEKLREQV---VKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDL 107
Query: 130 YYQHRVDTSVP-------------------IEETIGEMKKLVEEGKIKYIGLSEASPDTI 170
Y H P I +T M++LV+EG +K IG+S + +
Sbjct: 108 YLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQV 167
Query: 171 RRA--HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
+ + +++ C+ GI + Y PLG
Sbjct: 168 EMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWA 221
|
| >d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical protein C07D8.6 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 119 bits (298), Expect = 5e-33
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 24/223 (10%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
+KL G+E+ +G G S + I+ +K A G DTA Y
Sbjct: 2 ASIKLSN-GVEMPVIGLGTWQSS--------PAEVITAVKTAVKAGYRLIDTASVYQ--- 49
Query: 70 NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
NE +G A+KEL E + K + + + + P + SL++L +EY+DL
Sbjct: 50 NEEAIGTAIKELLEEGVV---KREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDL 106
Query: 130 YYQHRVD---------TSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180
Y H + P+E+ + + + G K +G+S + D I RA A+
Sbjct: 107 YLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTP 166
Query: 181 AVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKA 223
+ L +++ V C++ I + Y LG
Sbjct: 167 VHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGSPGRVNFT 209
|
| >d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 118 bits (297), Expect = 9e-33
Identities = 53/229 (23%), Positives = 86/229 (37%), Gaps = 33/229 (14%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
V L T G ++ +G G + IK+A + G D A +G NE
Sbjct: 5 VLLHT-GQKMPLIGLGTWKSE--------PGQVKAAIKYALTVGYRHIDCAAIFG---NE 52
Query: 72 ILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYY 131
+ +G+AL+E V + FV K PE V +L L +EY+DLY
Sbjct: 53 LEIGEALQETVGPGKAVPREELFV--TSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYL 110
Query: 132 QHRVDT-------------------SVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRR 172
H + ++T ++ LV +G ++ +GLS S I
Sbjct: 111 MHWPYAFERGDNPFPKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDD 170
Query: 173 AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGG 221
+V + L+ +NE++ C+ G+ + Y PLG
Sbjct: 171 VLSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAW 219
|
| >d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Xylose reductase species: Fungi (Candida tenuis) [TaxId: 45596]
Score = 117 bits (292), Expect = 4e-32
Identities = 54/239 (22%), Positives = 85/239 (35%), Gaps = 40/239 (16%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
+P +KL + G + +G+GC L+ + A G FD A+ YG
Sbjct: 2 IPDIKLSS-GHLMPSIGFGCWKLA--------NATAGEQVYQAIKAGYRLFDGAEDYG-- 50
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
NE +G +K E + K + L P+ V + +L L V+Y+D
Sbjct: 51 -NEKEVGDGVKRAIDEGL---VKREEIFLTSKLWNNYHDPKNVETALNKTLADLKVDYVD 106
Query: 129 LYYQH-------------------------RVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163
L+ H V VPI ET ++KLV GKIK IG+S
Sbjct: 107 LFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVS 166
Query: 164 EASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222
+ I L+ + +++ ++ G+ I Y G F
Sbjct: 167 NFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGPQSFVEM 225
|
| >d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Thermotoga maritima [TaxId: 2336]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Thermotoga maritima [TaxId: 2336]
Score = 113 bits (283), Expect = 6e-31
Identities = 51/206 (24%), Positives = 81/206 (39%), Gaps = 17/206 (8%)
Query: 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP 67
QVP+V L G+E+ LGYG + E + A G DTA Y
Sbjct: 1 QVPKVTLNN-GVEMPILGYGVFQIP--------PEKTEECVYEAIKVGYRLIDTAASYM- 50
Query: 68 YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYI 127
NE +G+A+K E I + + S + E + E SL++L +EYI
Sbjct: 51 --NEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDV---GYESTKKAFEKSLKKLQLEYI 105
Query: 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
DLY H+ + M+++ ++G ++ IG+S PD + H I +
Sbjct: 106 DLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIE 163
Query: 188 LWARDIENEIVPLCRELGIGIVPYCP 213
+ E + R I + P
Sbjct: 164 IHPFYQRQEEIEFMRNYNIQPEAWGP 189
|
| >d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Escherichia coli [TaxId: 562]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Escherichia coli [TaxId: 562]
Score = 108 bits (269), Expect = 5e-29
Identities = 52/212 (24%), Positives = 81/212 (38%), Gaps = 22/212 (10%)
Query: 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYT 69
+KL G + +LG G S E+ I+ I+ A G DTA Y
Sbjct: 4 TVIKLQD-GNVMPQLGLGVWQAS--------NEEVITAIQKALEVGYRSIDTAAAYK--- 51
Query: 70 NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDL 129
NE +GKALK EL T+ + + R SL++L ++YIDL
Sbjct: 52 NEEGVGKALKNASVNRE---------ELFITTKLWNDDHKRPREALLDSLKKLQLDYIDL 102
Query: 130 YYQHRVDTSVPIEETIGEMK-KLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSL 188
Y H ++ + +L +EG IK IG+ ++R +T V + L
Sbjct: 103 YLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIEL 162
Query: 189 WARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220
+ ++ I + PL +G G
Sbjct: 163 HPLMQQRQLHAWNATHKIQTESWSPLAQGGKG 194
|
| >d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: FR-1 (fibroblast growth factor-induced) protein species: Mouse (Mus musculus) [TaxId: 10090]
Score = 107 bits (268), Expect = 1e-28
Identities = 44/229 (19%), Positives = 78/229 (34%), Gaps = 36/229 (15%)
Query: 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNE 71
V+L T ++ +G G +K A G D A Y NE
Sbjct: 4 VELST-KAKMPIVGLGTWKSP--------PNQVKEAVKAAIDAGYRHIDCAYAYC---NE 51
Query: 72 ILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYY 131
+G+A++E +E V + + + ++ + +L L ++Y+DLY
Sbjct: 52 NEVGEAIQEKIKEKAVQREDLFIVSKLWPTCF---EKKLLKEAFQKTLTDLKLDYLDLYL 108
Query: 132 QHRVDTSVP-------------------IEETIGEMKKLVEEGKIKYIGLSEASPDTIRR 172
H P E M++LV++G +K +G+S + I R
Sbjct: 109 IHWPQGLQPGKELFPKDDQGRILTSKTTFLEAWEGMEELVDQGLVKALGVSNFNHFQIER 168
Query: 173 --AHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219
V + + +++ C GI + Y PLG
Sbjct: 169 LLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGISVTAYSPLGSPDR 217
|
| >d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical oxidoreductase YdhF species: Escherichia coli [TaxId: 562]
Score = 106 bits (265), Expect = 2e-28
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 11/213 (5%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
V R+ + QG E S+ G L +S +S I+ G+T D AD YG Y
Sbjct: 2 VQRITIAPQGPEFSRFVMGYWRLMD---WNMSARQLVSFIEEHLDLGVTTVDHADIYGGY 58
Query: 69 TNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG---TPEYVRSCCEASLRRLD 123
E G+ALK P RE +++ +K G ++ +++ E SL L
Sbjct: 59 QCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLA 118
Query: 124 VEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHP--ITA 181
+++DL HR D + +E K L + GK+++ G+S +P + P +
Sbjct: 119 TDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLAT 178
Query: 182 VQLEWSLWARDI-ENEIVPLCRELGIGIVPYCP 213
Q+E S + + + + ++L + + +
Sbjct: 179 NQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSC 211
|
| >d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Corynebacterium sp. [TaxId: 1720]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Corynebacterium sp. [TaxId: 1720]
Score = 93.9 bits (232), Expect = 1e-23
Identities = 40/206 (19%), Positives = 70/206 (33%), Gaps = 20/206 (9%)
Query: 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPY 68
VP + L G + +LGYG + D ++ A G DTA YG
Sbjct: 2 VPSIVLND-GNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYGNE 52
Query: 69 TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYID 128
+ A + R+++ + TK + + + SL +L ++ +D
Sbjct: 53 -EGVGAAIAASGIARDDLFITTKLWN---------DRHDGDEPAAAIAESLAKLALDQVD 102
Query: 129 LYYQHRVDTSVPIEE-TIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187
LY H + +M +L G + IG+S + R A + +
Sbjct: 103 LYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIE 162
Query: 188 LWARDIENEIVPLCRELGIGIVPYCP 213
L + EI + I + P
Sbjct: 163 LHPAYQQREITDWAAAHDVKIESWGP 188
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 235 | |||
| d1pyfa_ | 311 | Putative oxidoreductase IolS {Bacillus subtilis [T | 100.0 | |
| d1pz1a_ | 333 | Putative oxidoreductase YhdN {Bacillus subtilis [T | 100.0 | |
| d1ur3m_ | 298 | Hypothetical oxidoreductase YdhF {Escherichia coli | 100.0 | |
| d1gvea_ | 324 | Aflatoxin aldehyde reductase (akr7a1) {Rat (Rattus | 100.0 | |
| d1lqaa_ | 346 | Tas protein {Escherichia coli [TaxId: 562]} | 100.0 | |
| d3eaua1 | 326 | Voltage-dependent K+ channel beta subunit {Rat (Ra | 100.0 | |
| d1hw6a_ | 262 | 2,5-diketo-D-gluconic acid reductase A {Corynebact | 100.0 | |
| d1afsa_ | 319 | 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus | 100.0 | |
| d1qwka_ | 312 | Hypothetical protein C07D8.6 {Nematode (Caenorhabd | 100.0 | |
| d1s1pa_ | 315 | Prostaglandin d2 11-ketoreductase (akr1c3) {Human | 100.0 | |
| d1us0a_ | 314 | Aldose reductase (aldehyde reductase) {Human (Homo | 100.0 | |
| d1mi3a_ | 319 | Xylose reductase {Fungi (Candida tenuis) [TaxId: 4 | 100.0 | |
| d1mzra_ | 274 | 2,5-diketo-D-gluconic acid reductase A {Escherichi | 100.0 | |
| d1vp5a_ | 284 | 2,5-diketo-D-gluconic acid reductase A {Thermotoga | 100.0 | |
| d1hqta_ | 324 | Aldose reductase (aldehyde reductase) {Pig (Sus sc | 100.0 | |
| d1frba_ | 315 | FR-1 (fibroblast growth factor-induced) protein {M | 100.0 | |
| d1sjda1 | 242 | N-acylamino acid racemase {Amycolatopsis sp. [TaxI | 92.64 | |
| d1kcza1 | 253 | beta-Methylaspartase {Clostridium tetanomorphum [T | 92.07 | |
| d2chra1 | 244 | Chlormuconate cycloisomerase {Alcaligenes eutrophu | 91.85 | |
| d1jpma1 | 234 | L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: | 91.57 | |
| d1r0ma1 | 243 | N-acylamino acid racemase {Deinococcus radiodurans | 91.12 | |
| d1nu5a1 | 243 | Chlormuconate cycloisomerase {Pseudomonas sp. p51 | 90.44 | |
| d1wuea1 | 241 | N-acylamino acid racemase {Enterococcus faecalis [ | 90.42 | |
| d1kkoa1 | 251 | beta-Methylaspartase {Citrobacter amalonaticus [Ta | 90.18 | |
| d1jdfa1 | 309 | D-glucarate dehydratase {Escherichia coli [TaxId: | 89.78 | |
| d1wufa1 | 244 | N-acylamino acid racemase {Listeria innocua [TaxId | 89.73 | |
| d1yeya1 | 252 | RTS beta protein {Xanthomonas campestris pv. campe | 85.22 | |
| d2gdqa1 | 256 | Hypothetical protein YitF {Bacillus subtilis [TaxI | 82.93 |
| >d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase IolS species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=1e-51 Score=350.41 Aligned_cols=221 Identities=31% Similarity=0.590 Sum_probs=200.6
Q ss_pred CceecCCCCcccCcceeccccCCCC-CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEE
Q 026625 10 PRVKLGTQGLEVSKLGYGCMSLSGC-YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQV 88 (235)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~-~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I 88 (235)
++|+||+||++||+||||||++|+. ++...+++++.++|++|++.|||+||||+.||+|.+|+.+|++|+..+|++++|
T Consensus 1 ~~~rLG~tgl~vS~iglGt~~~g~~~~~~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lg~~l~~~~r~~~~i 80 (311)
T d1pyfa_ 1 KKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVI 80 (311)
T ss_dssp CCEECTTSCCEECSBCEECTTSSCTTTCSSCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGCEE
T ss_pred CCcccCCCCCeecceeeeCcccCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEehhhcCCCccHHHHhhhhhcccccceec
Confidence 4899999999999999999999863 233468999999999999999999999999999999999999999888999999
Q ss_pred EeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCCCHH
Q 026625 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPD 168 (235)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~ 168 (235)
+||++..... +....+.+++.+++++++||++|+++|+|++++|+|+...+.++++++|++|+++|+||+||+||++.+
T Consensus 81 ~tK~~~~~~~-~~~~~~~~~~~i~~s~~~SL~rl~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~Gkir~iGvs~~~~~ 159 (311)
T d1pyfa_ 81 ATKAAHRKQG-NDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLE 159 (311)
T ss_dssp EEEECEEEET-TEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCCHH
T ss_pred ceeccCCCCC-cccccccchHHHHHHHHhhHHhhCCcHHhhhcccCCCcccchhhHHHHHHHHHhCCeEEeecccCCcHH
Confidence 9999876532 223456789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCCCC-CCCCCCC
Q 026625 169 TIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAV-VESVPLD 231 (235)
Q Consensus 169 ~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~-~~~~~~~ 231 (235)
.+.++.+..+++++|++||++++..+.+++++|+++||++++|+||++|+|++++. ...+|..
T Consensus 160 ~~~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~~i~v~~~~~l~~G~l~~~~~~~~~~~~~ 223 (311)
T d1pyfa_ 160 QLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEG 223 (311)
T ss_dssp HHHHHTTTSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCCTTCCCCTT
T ss_pred HHHHHhhcCCcceEeeeecccchhhhHHHHHHHHHCCceEEEeccccCCccCCCcCcCCCCccc
Confidence 99999999999999999999999888899999999999999999999999999944 3444443
|
| >d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Putative oxidoreductase YhdN species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=1.1e-50 Score=347.22 Aligned_cols=219 Identities=33% Similarity=0.527 Sum_probs=200.8
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEE
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQ 87 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~ 87 (235)
|+||+||+||++||+||||||++|+.+....+++++.++|+.|++.|||+||||+.||+|.||+.+|+++++ ..|++++
T Consensus 1 M~yr~lG~tgl~vs~iglGt~~~g~~~~~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lG~~l~~~~~r~~~~ 80 (333)
T d1pz1a_ 1 MEYTSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQVI 80 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTTCCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGCE
T ss_pred CCCeECCCCCCCccCeeEcCCccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEccCccCCCccHHHHhhccccccccchhh
Confidence 789999999999999999999998765555689999999999999999999999999999999999999987 7899999
Q ss_pred EEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCCCH
Q 026625 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 167 (235)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~ 167 (235)
++||.+..... .......++..+.+++++||++|+++|+|++++|+|+...+..++|++|++|+++|+|++||+||++.
T Consensus 81 ~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~sL~rL~~~~iDl~~lH~~d~~~~~~~~~~~l~~l~~~G~ir~iGvS~~~~ 159 (333)
T d1pz1a_ 81 LATKTALDWKN-NQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSI 159 (333)
T ss_dssp EEEEECEEESS-SCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCCH
T ss_pred ccccccccccc-ccccccchHHHHHHHHHhhhhccCCChhhccccccCccccchhhHHHHHHHHHHcCCEEEEeecccch
Confidence 99999865533 12344568899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCCCCCCCC
Q 026625 168 DTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESV 228 (235)
Q Consensus 168 ~~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~ 228 (235)
.++..+.....+..+|+.||++++..+.+++++|+++||++++|+||++|+|++++.....
T Consensus 160 ~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~s~l~~G~Lt~~~~~~~~ 220 (333)
T d1pz1a_ 160 EQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYT 220 (333)
T ss_dssp HHHHHHHTTSCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCCTTCC
T ss_pred hhccchhccccccccccccccccccccccccchhhcccccceeccccccccccCccCCCcc
Confidence 9999999888999999999999998889999999999999999999999999999554443
|
| >d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical oxidoreductase YdhF species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6e-48 Score=325.12 Aligned_cols=211 Identities=25% Similarity=0.352 Sum_probs=188.1
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCE
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENI 86 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~ 86 (235)
|++++||++|.+||+||||||++++ |+ .+++++.++|++|++.|||+||||+.||+|.+|+.+|+||+. .+|+++
T Consensus 2 m~~~~lg~~G~~vs~ig~G~~~~~~-~~--~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~g~se~~lG~al~~~~~~r~~~ 78 (298)
T d1ur3m_ 2 VQRITIAPQGPEFSRFVMGYWRLMD-WN--MSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERM 78 (298)
T ss_dssp CCEEECSTTCCEEESSEEECTTTTT-TT--CCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTC
T ss_pred CCceEeCCCCCEeCCEEEeCcccCC-CC--CCHHHHHHHHHHHHHcCCCEEEeccccCCccccccccccccccccchhhh
Confidence 7899999999999999999999975 54 478999999999999999999999999999999999999997 569999
Q ss_pred EEEeccccccCCC---cccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeC
Q 026625 87 QVATKFGFVELGF---TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (235)
Q Consensus 87 ~I~tK~~~~~~~~---~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvS 163 (235)
+|+||++...... .......+++.+++++++||+|||+||||+|++|++++..+.+++|++|++++++|+||+||+|
T Consensus 79 ~i~tK~g~~~~~~~~~~~~~~~~s~~~i~~~~~~SL~rL~~d~iDl~~lH~~d~~~~~~e~~~~l~~lk~~GkIr~iG~S 158 (298)
T d1ur3m_ 79 EIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVS 158 (298)
T ss_dssp EEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEEE
T ss_pred hhhhcccccccCCCcCcccCCCCCHHHHHHHHHhhhhhhccccccccccccccccchhHHHHHHHHHhhccCcceeecCC
Confidence 9999998765331 1223457899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhcC--CeeEEeeccCccccccc-chHHHHHHHhCCeEEecccCccccCCCC
Q 026625 164 EASPDTIRRAHAVH--PITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (235)
Q Consensus 164 n~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~ 222 (235)
||++++++++.... .+..+|++||++++... ..+...|++++|.+++++||++|.+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~~ 220 (298)
T d1ur3m_ 159 NFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFND 220 (298)
T ss_dssp SCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSC
T ss_pred CCcHHHHHHHHhhhcccccccccccCchhhhhhhhhhhhhHhhcCEeeeecccccccccccc
Confidence 99999999988764 45567778888887654 6788999999999999999999988764
|
| >d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Tas protein species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.5e-47 Score=329.25 Aligned_cols=217 Identities=27% Similarity=0.395 Sum_probs=181.6
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCC-------CCcHHHHHHHHHhcC
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG-------PYTNEILLGKALKEL 81 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-------~g~sE~~lG~al~~~ 81 (235)
|+||+||+||++||+||||||+||+ ..+++++.++|+.|++.|||+||||+.|| .|.+|..+|.+++..
T Consensus 1 M~yr~lG~tgl~vs~iglGt~~~g~----~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~~~~~~~~G~~E~~~g~~~~~~ 76 (346)
T d1lqaa_ 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH 76 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH
T ss_pred CCCeECCCCCCEecCeeEeCccCCC----CCCHHHHHHHHHHHHHcCCCEEEcccccCCCcccccccchhhhhcchhhhc
Confidence 7899999999999999999998764 34789999999999999999999999998 488999999999973
Q ss_pred -CCCCEEEEeccc-cccCCC--cccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCC-----------------CC
Q 026625 82 -PRENIQVATKFG-FVELGF--TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-----------------VP 140 (235)
Q Consensus 82 -~R~~~~I~tK~~-~~~~~~--~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~-----------------~~ 140 (235)
......+.++.. ...... .......+++.+++++++||+|||+||||+|++|+|+.. ..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~d~iDl~~lH~~d~~~~~~~~~~~~~~~~~~~~~ 156 (346)
T d1lqaa_ 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_dssp CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC
T ss_pred cccceeeeeecccCCCccccccccccccccHHHHHHHHHHHHHHhCCCeeeeeehhccCccccccccccccccccccccc
Confidence 233333333322 221111 122345689999999999999999999999999998632 34
Q ss_pred HHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhc------CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccC
Q 026625 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV------HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~------~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl 214 (235)
.+++|++|++|+++|+||+||+|||+.+++.++++. .+++++|++||++++..+.+++++|+++||.+++|+||
T Consensus 157 ~~~~~~~l~~l~~~G~ir~iGvS~~~~~~~~~~~~~~~~~~~~~~~~~q~~yn~~~~~~e~~~~~~~~~~~i~v~a~~pl 236 (346)
T d1lqaa_ 157 LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTT
T ss_pred HHHHHHHHHHHHhCCCeeEEEEeccCHHHHHHHHHHhhhcCCCCeEEEeCCCccccchHHHHHHHHHHHhCCeEEEeccc
Confidence 578999999999999999999999999998888653 57999999999999988889999999999999999999
Q ss_pred ccccCCCCCCCCCCC
Q 026625 215 GRGFFGGKAVVESVP 229 (235)
Q Consensus 215 ~~G~L~~~~~~~~~~ 229 (235)
++|+|+|++.....|
T Consensus 237 ~~G~Ltg~~~~~~~~ 251 (346)
T d1lqaa_ 237 GFGTLTGKYLNGAKP 251 (346)
T ss_dssp GGGGGGTTTGGGCCC
T ss_pred ccccccCCccCCCCC
Confidence 999999995544333
|
| >d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta subunit {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Voltage-dependent K+ channel beta subunit species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.7e-46 Score=315.72 Aligned_cols=214 Identities=28% Similarity=0.465 Sum_probs=189.7
Q ss_pred ceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCEEE
Q 026625 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQV 88 (235)
Q Consensus 11 ~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~~I 88 (235)
||+||+||++||+||||||+. ||...+++++.++|+.|++.|||+||||+.||+|.+|..+|++++. ..|++++|
T Consensus 4 YR~lG~tg~~vs~iglGt~~~---~g~~~~~~~a~~~l~~A~~~Gin~~DTA~~Yg~g~sE~~lG~~l~~~~~~r~~~~i 80 (326)
T d3eaua1 4 YRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVI 80 (326)
T ss_dssp EEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEE
T ss_pred cccCCCCCCcccCeeecCCCc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHhHHHHhcCCcceeEEe
Confidence 899999999999999999874 4445689999999999999999999999999999999999999987 57899999
Q ss_pred EeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEeCCCCHH
Q 026625 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPD 168 (235)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~ 168 (235)
+||++..... ......+++.+.+++++||++|++||||+|++|+|+...+..+.++.+.+++++|+++++|+|++...
T Consensus 81 ~tk~~~~~~~--~~~~~~~~~~~~~s~~~SL~rL~~d~iDl~~lH~pd~~~~~~e~~~~~~~~~~~g~~~~~g~s~~~~~ 158 (326)
T d3eaua1 81 TTKIFWGGKA--ETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSM 158 (326)
T ss_dssp EEEESBCCSS--GGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHH
T ss_pred eeeccccccc--ccccCccHHHHHHHHHHHHhhcCccceeeecccCCCccccchhhhcccceeeeeeccccccccccccc
Confidence 9999876532 23446789999999999999999999999999999998999999999999999999999999999987
Q ss_pred HHHHHHh------cCCeeEEeeccCccccccc-chHHHHHHHhCCeEEecccCccccCCCCCCCCCCC
Q 026625 169 TIRRAHA------VHPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRGFFGGKAVVESVP 229 (235)
Q Consensus 169 ~l~~~~~------~~~~~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~ 229 (235)
...+... ..++.++|..+|++++..+ .+++++|+++||++++|+||++|+|+++......|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~v~~~spl~~G~l~~~~~~~~~~ 226 (326)
T d3eaua1 159 EIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPP 226 (326)
T ss_dssp HHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTTSCCT
T ss_pred hhhhhhcchhccCCCceeeeccccchhhhhhhHHHHHHHHHHcCCEEEeecccccCccccccCCCCCc
Confidence 6665433 2578899999999998654 67999999999999999999999999996544433
|
| >d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Corynebacterium sp. [TaxId: 1720]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Corynebacterium sp. [TaxId: 1720]
Probab=100.00 E-value=4.6e-45 Score=302.49 Aligned_cols=193 Identities=24% Similarity=0.359 Sum_probs=169.9
Q ss_pred CCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCC
Q 026625 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (235)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~ 85 (235)
|+|+++| +||.+||.||||||+++ .+++.++|+.|++.|||+||||+.|| +|+.++.+++. .+|++
T Consensus 1 ~ip~~~l-~~G~~v~~ig~Gt~~~~--------~~~~~~~l~~A~d~Gi~~~DTA~~YG---~ee~~~~~~~~~~~~r~~ 68 (262)
T d1hw6a_ 1 TVPSIVL-NDGNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDD 68 (262)
T ss_dssp CCCEEEC-TTSCEEESBCEECCSCC--------GGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGGG
T ss_pred CCCeEEC-CCCCEecceeeeCCCCC--------hHHHHHHHHHHHHcCCCEEEcccccC---ChhhhCcccccCCCCcce
Confidence 5789999 79999999999999753 46789999999999999999999999 55556666655 78999
Q ss_pred EEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCC-HHHHHHHHHHHHHcCCccEEEeCC
Q 026625 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVP-IEETIGEMKKLVEEGKIKYIGLSE 164 (235)
Q Consensus 86 ~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~-~~~~~~~l~~l~~~G~ir~iGvSn 164 (235)
+++.||.+... .+++.+++++++||+|||+||||+|++|+|++..+ ..++|++|++|+++|+||+||+||
T Consensus 69 ~~~~tk~~~~~---------~~~~~~~~sl~~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~ 139 (262)
T d1hw6a_ 69 LFITTKLWNDR---------HDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSN 139 (262)
T ss_dssp CEEEEEECCC--------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred EEEeeeccccc---------ccccchhhhhhhhhhhcccceeeeeeeeccCCCCccchhhHHHHHHHHHhCcceeeeccc
Confidence 99999998654 45788999999999999999999999999987654 679999999999999999999999
Q ss_pred CCHHHHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCC
Q 026625 165 ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGG 221 (235)
Q Consensus 165 ~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 221 (235)
|+.++++++....++..+|++||+..+..+..++++|+++||.+++|+||++|.+..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~a~~pl~~G~~~~ 196 (262)
T d1hw6a_ 140 HLVPHLERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDVKIESWGPLGQGKYDL 196 (262)
T ss_dssp CCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGGGSSCC
T ss_pred ccchhhhhHhhhcccCCccceechhhccccccchhhHHHcCcEEEEeeccccccccc
Confidence 999999999988788888999999998878899999999999999999999997654
|
| >d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 3-alpha-hydroxysteroid dehydrogenase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-44 Score=307.32 Aligned_cols=199 Identities=26% Similarity=0.374 Sum_probs=170.9
Q ss_pred cCCCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-----
Q 026625 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE----- 80 (235)
Q Consensus 6 ~~~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~----- 80 (235)
|..|++|...++|.+||.||||||.++. .+++++.++|+.|++.|||+||||+.|| ||+.+|++|++
T Consensus 1 ~~~~~~r~~~~~G~~ip~iGlGt~~~~~-----~~~~~~~~~i~~A~d~Gin~~DTA~~Yg---sE~~lG~~l~~~~~~~ 72 (319)
T d1afsa_ 1 MDSISLRVALNDGNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDG 72 (319)
T ss_dssp CCGGGCEEECTTSCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTT
T ss_pred CCccCceEECCCcCEEcCEeeECCCCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHhhhhhc
Confidence 5566767666999999999999997653 4667899999999999999999999999 89999999986
Q ss_pred -CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-------------------CCC
Q 026625 81 -LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVP 140 (235)
Q Consensus 81 -~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~ 140 (235)
..|+.+++.+|..... .+++.++.++++||++||+||||+|++|+|+. ..+
T Consensus 73 ~~~~~~~~~~~~~~~~~---------~~~~~~~~s~e~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~ 143 (319)
T d1afsa_ 73 TVKREDIFYTSKLWSTF---------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVD 143 (319)
T ss_dssp SCCGGGCEEEEEECGGG---------CSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCC
T ss_pred cccceeeeecccccccc---------cchhhHHHHHHHHHhhcCCcccceeEeccccCCCCCccccCccccccccccCCC
Confidence 5788999999987654 45778899999999999999999999999853 234
Q ss_pred HHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhcC--C--eeEEeeccCcccccccchHHHHHHHhCCeEEecccCcc
Q 026625 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--P--ITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGR 216 (235)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~--~--~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~ 216 (235)
++++|++|++|+++|+||+||+||++.++++++++.. + +.++|+.+++... +.+++++|+++||++++|+||++
T Consensus 144 ~~e~~~~l~~l~~~Gkir~iGvSn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ll~~~~~~~i~i~a~spl~~ 221 (319)
T d1afsa_ 144 ICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLN--QSKMLDYCKSKDIILVSYCTLGS 221 (319)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTSC
T ss_pred HHHHHHHHHHHHHcCCEEEEeeccccHHHHHHHHHhhcccccccccccchhhccc--hHHHhHHHHHcCceecccccccc
Confidence 7899999999999999999999999999999987652 3 4456666655444 57899999999999999999999
Q ss_pred ccCCCCC
Q 026625 217 GFFGGKA 223 (235)
Q Consensus 217 G~L~~~~ 223 (235)
|.++...
T Consensus 222 G~~~~~~ 228 (319)
T d1afsa_ 222 SRDKTWV 228 (319)
T ss_dssp CCCTTTS
T ss_pred ccccCcc
Confidence 9988763
|
| >d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Hypothetical protein C07D8.6 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=6.1e-44 Score=302.63 Aligned_cols=191 Identities=28% Similarity=0.413 Sum_probs=171.1
Q ss_pred ceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------CCCC
Q 026625 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPRE 84 (235)
Q Consensus 11 ~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~~R~ 84 (235)
..+| +||++||.||||||++ +++++.++|+.|++.|||+||||+.|| ||+.+|+||++ ..|+
T Consensus 3 ~~kL-~tG~~vs~lg~Gt~~~--------~~~~~~~~i~~Al~~Gin~~DTA~~Yg---sE~~lG~al~~~~~~~~~~r~ 70 (312)
T d1qwka_ 3 SIKL-SNGVEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVKRE 70 (312)
T ss_dssp EEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCCGG
T ss_pred cEEC-CCCCccccceeECCCC--------CHHHHHHHHHHHHHcCCCEEEChhhhc---CHHHHHHHHHHhhhccccccc
Confidence 5789 7999999999999864 568899999999999999999999998 89999999986 5799
Q ss_pred CEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC---------CCCHHHHHHHHHHHHHcC
Q 026625 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT---------SVPIEETIGEMKKLVEEG 155 (235)
Q Consensus 85 ~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~---------~~~~~~~~~~l~~l~~~G 155 (235)
++++.+|.+... .+++.+++++++||++||+||||+|++|+|+. ..+++++|++|++++++|
T Consensus 71 ~~~i~~k~~~~~---------~~~~~~~~~~~~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~ee~~~~l~~l~~~G 141 (312)
T d1qwka_ 71 ELFITTKAWTHE---------LAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAG 141 (312)
T ss_dssp GCEEEEEECTTT---------SSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHHTT
T ss_pred cceeeccccccc---------ccchhHHHHHHHHhhhcCCCcceeeecccCCcccccccccccCcHHHHHHHHHHHHhcC
Confidence 999999987544 46788999999999999999999999999963 346889999999999999
Q ss_pred CccEEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCC
Q 026625 156 KIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (235)
Q Consensus 156 ~ir~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 222 (235)
+||+||+|||+.++++++++...+.++|..++...+..+.+++++|+++||++++|+||++|.+.+.
T Consensus 142 ~ir~iG~Sn~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~spL~~g~~~~~ 208 (312)
T d1qwka_ 142 LAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGSPGRVNF 208 (312)
T ss_dssp SBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCSCCEECC
T ss_pred ccccccccccchhHHHHHhhccccchhhhhhcchhhcccHHHHHHHHhcCccccccCcccccccccC
Confidence 9999999999999999999987777777777776666678999999999999999999999977665
|
| >d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Prostaglandin d2 11-ketoreductase (akr1c3) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-43 Score=298.77 Aligned_cols=194 Identities=26% Similarity=0.368 Sum_probs=172.9
Q ss_pred CceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------CCC
Q 026625 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (235)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~~R 83 (235)
++++| ++|.+||+||||||+++. .+++++.++|++|++.|||+||||+.|| +|+.+|++|+. .+|
T Consensus 1 ~~~~l-~~G~~ip~lGlGt~~~g~-----~~~~~~~~~l~~A~d~Gin~fDTA~~Yg---sE~~lG~~l~~~~~~~~~~~ 71 (315)
T d1s1pa_ 1 QCVKL-NDGHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKR 71 (315)
T ss_dssp CEEEC-TTSCEEESEEEECCCCTT-----SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCG
T ss_pred CeEEC-CCCCeecceeeecCCCCC-----CCHHHHHHHHHHHHHcCCCEEEcCCccC---CHHHHHHHHHHHHHhccccc
Confidence 35789 999999999999998654 4778899999999999999999999999 89999999986 589
Q ss_pred CCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCC-------------------CCHHHH
Q 026625 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-------------------VPIEET 144 (235)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~-------------------~~~~~~ 144 (235)
+++++.||..... .+++.+++++++||++|++||||+|++|+|+.. .++.++
T Consensus 72 ~~~~~~t~~~~~~---------~~~~~v~~~~~~SL~rL~~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (315)
T d1s1pa_ 72 EDIFYTSKLWSTF---------HRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTT 142 (315)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHH
T ss_pred ccccccccccccc---------CCccchhhhHHHHHHhhCCCchhhccccCCCCCCcccccCccccccccccccccHHHH
Confidence 9999999987654 568999999999999999999999999998642 246789
Q ss_pred HHHHHHHHHcCCccEEEeCCCCHHHHHHHHhc----CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCC
Q 026625 145 IGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220 (235)
Q Consensus 145 ~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~----~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~ 220 (235)
|++|++|+++|+||+|||||++.+++++++.. ..+.++|+.+++... +.+++++|+++||++++|+||++|.++
T Consensus 143 ~~~l~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~i~v~a~~pl~~g~~~ 220 (315)
T d1s1pa_ 143 WEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFN--RSKLLDFCKSKDIVLVAYSALGSQRDK 220 (315)
T ss_dssp HHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTSCCCCT
T ss_pred HHHHHHHHHcCcccccCCCCCCHHHHHHHHHhhccccCcchhhcccccccc--HHHHHHHHHHcCCcccccccccccccc
Confidence 99999999999999999999999999988765 456788999888776 368999999999999999999999988
Q ss_pred CCC
Q 026625 221 GKA 223 (235)
Q Consensus 221 ~~~ 223 (235)
...
T Consensus 221 ~~~ 223 (315)
T d1s1pa_ 221 RWV 223 (315)
T ss_dssp TTS
T ss_pred ccc
Confidence 763
|
| >d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-42 Score=293.00 Aligned_cols=193 Identities=25% Similarity=0.369 Sum_probs=168.6
Q ss_pred CCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------CC
Q 026625 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LP 82 (235)
Q Consensus 9 m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~~ 82 (235)
|++|.+++||++||.||||||++ +++++.++|+.|+++|||+||||+.|| +|+.+|++|++ ..
T Consensus 1 ~~~r~~~~tG~~vs~iglGtw~~--------~~~~~~~~i~~A~~~Gin~fDTA~~Yg---sE~~lG~~l~~~~~~~~~~ 69 (314)
T d1us0a_ 1 MASRILLNNGAKMPILGLGTWKS--------PPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVK 69 (314)
T ss_dssp CCSEEECTTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSC
T ss_pred CCCceECCCcCEecceeeECCCC--------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHhhhhccccc
Confidence 78999999999999999999863 679999999999999999999999999 89999999987 34
Q ss_pred CCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-------------------CCCHHH
Q 026625 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIEE 143 (235)
Q Consensus 83 R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~~~ 143 (235)
|.+..+.++.... ..+++.+++++++||++|++||||+|++|+|+. ...+.+
T Consensus 70 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~SL~rl~~d~idl~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (314)
T d1us0a_ 70 REELFIVSKLWCT---------YHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILD 140 (314)
T ss_dssp GGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred ccccccccccccc---------cccchhhHHHHHHHhhhcCCCceeeeeeccCCCCCcccccCCcccccccCCCCCCHHH
Confidence 5566666665443 356899999999999999999999999999852 235679
Q ss_pred HHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhc----CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccC
Q 026625 144 TIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV----HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 219 (235)
Q Consensus 144 ~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~----~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 219 (235)
+|++|++|+++|+||+|||||++++++++++.. ..+.++|+.+|.... +.+++++|+++||++++|+||++|.+
T Consensus 141 ~~~~L~~lk~~G~Ir~iGvS~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~~i~~~~~~pl~~g~~ 218 (314)
T d1us0a_ 141 TWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLT--QEKLIQYCQSKGIVVTAYSPLGSPDR 218 (314)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCTTC
T ss_pred HHHHHHHHHHcCCeeEeeccCCCHHHHHHHHHhccCCcCchhhhhhcchhhh--HHHHHHHHHHcCCeeeccCccccccc
Confidence 999999999999999999999999999988765 356788888887665 46899999999999999999999998
Q ss_pred CCCC
Q 026625 220 GGKA 223 (235)
Q Consensus 220 ~~~~ 223 (235)
+...
T Consensus 219 ~~~~ 222 (314)
T d1us0a_ 219 PWAK 222 (314)
T ss_dssp TTCC
T ss_pred cccC
Confidence 8773
|
| >d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Xylose reductase species: Fungi (Candida tenuis) [TaxId: 45596]
Probab=100.00 E-value=1.1e-42 Score=295.66 Aligned_cols=193 Identities=28% Similarity=0.463 Sum_probs=170.0
Q ss_pred CCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------C
Q 026625 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------L 81 (235)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~ 81 (235)
+||+++| +||++||+||||||++ +.+++.++|+.|+++|||+||||+.|| +|+.+|++|++ .
T Consensus 1 ~~p~~~L-~sG~~vs~lg~Gt~~~--------~~~ea~~~i~~Ald~Gin~fDTA~~YG---sE~~lG~~l~~~~~~~~~ 68 (319)
T d1mi3a_ 1 SIPDIKL-SSGHLMPSIGFGCWKL--------ANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGLV 68 (319)
T ss_dssp CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEc-CCCCEeccceeECCCC--------ChHHHHHHHHHHHHcCCCEEECCCccC---CHHHHHHHHHHHhhhccc
Confidence 5899999 6899999999999975 458899999999999999999999999 89999999986 4
Q ss_pred CCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC------------------------
Q 026625 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT------------------------ 137 (235)
Q Consensus 82 ~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~------------------------ 137 (235)
.+.++.+.+|..... .+++.+++++++||+||++||||+|++|+|..
T Consensus 69 ~~~~~~~~~~~~~~~---------~~~~~i~~~~~~SL~rL~~d~iDl~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (319)
T d1mi3a_ 69 KREEIFLTSKLWNNY---------HDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVY 139 (319)
T ss_dssp CGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCB
T ss_pred ccccccccccccccc---------ccchhhhhhhHHHHhhccccchhhhhccCccccccccccccCCccccccccccccC
Confidence 456677777665433 57999999999999999999999999998732
Q ss_pred -CCCHHHHHHHHHHHHHcCCccEEEeCCCCHHHHHHHHhc--CCeeEEeeccCcccccccchHHHHHHHhCCeEEecccC
Q 026625 138 -SVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 138 -~~~~~~~~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl 214 (235)
..++++++++|++|+++|+||+||+||++.+++.+++.. ..+.++|.+|+++++. .+++++|+++++.+++|+||
T Consensus 140 ~~~~~~e~~~~l~~l~~~Gkir~iG~S~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~--~~l~~~~~~~~i~~~a~~pl 217 (319)
T d1mi3a_ 140 EDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITAYSSF 217 (319)
T ss_dssp CCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHCCCEeecccCCCchHHHHHHHhhcCCCchhhhccccccccc--HHHHHHHHHhhccceeccCC
Confidence 245789999999999999999999999999999888765 4568999999999884 68999999999999999999
Q ss_pred ccccCCCCC
Q 026625 215 GRGFFGGKA 223 (235)
Q Consensus 215 ~~G~L~~~~ 223 (235)
+.|.++...
T Consensus 218 ~~~~~~~~~ 226 (319)
T d1mi3a_ 218 GPQSFVEMN 226 (319)
T ss_dssp TTHHHHTTT
T ss_pred ccccccccc
Confidence 999887653
|
| >d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-42 Score=289.29 Aligned_cols=188 Identities=29% Similarity=0.366 Sum_probs=166.4
Q ss_pred CceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc--CCCCCEE
Q 026625 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQ 87 (235)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~--~~R~~~~ 87 (235)
.+.+| ++|.+||+||||||++ +++++.++|++|+++|||+||||+.|| ||+.+|++|+. ..|++++
T Consensus 4 ~~~~l-n~G~~ip~ig~G~~~~--------~~~ea~~~l~~A~d~Gin~~DTA~~Yg---sE~~lG~~l~~~~~~~~~~~ 71 (274)
T d1mzra_ 4 TVIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNREELF 71 (274)
T ss_dssp CEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCGGGCE
T ss_pred CEEEC-CCCCcccCeeEECCCC--------CHHHHHHHHHHHHHcCCCEEECcCccC---CHHHHHHHhhcccccccccc
Confidence 46789 9999999999999874 568999999999999999999999999 89999999987 5689999
Q ss_pred EEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCC-CHHHHHHHHHHHHHcCCccEEEeCCCC
Q 026625 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSV-PIEETIGEMKKLVEEGKIKYIGLSEAS 166 (235)
Q Consensus 88 I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~-~~~~~~~~l~~l~~~G~ir~iGvSn~~ 166 (235)
|+||..... ++.+.+++++||+||++||||+|++|+|+... ...++|++|++|+++|+||+||+|||+
T Consensus 72 i~tk~~~~~-----------~~~~~~~~~~Sl~rL~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~i~~iGvs~~~ 140 (274)
T d1mzra_ 72 ITTKLWNDD-----------HKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQ 140 (274)
T ss_dssp EEEEECGGG-----------TTCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred ccccccccc-----------chhHHHHHHHHHHhcCCCeEEEEEecCCCccchhHHHHHHHHHHHHHCCCEEEEeecccc
Confidence 999986543 45688999999999999999999999997654 456799999999999999999999999
Q ss_pred HHHHHHHHhcCCeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCC
Q 026625 167 PDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220 (235)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~ 220 (235)
.+++.++++..++..+|..+++.....+..++++|+++|+.+++|+||++|...
T Consensus 141 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~a~~pl~~G~~~ 194 (274)
T d1mzra_ 141 IHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKG 194 (274)
T ss_dssp HHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTTTCTT
T ss_pred chHHHHHHHhcCCCceeeehhhcccccchhhhhhhhhcceeEEEcChhhcCCCc
Confidence 999999988766666666677766666688999999999999999999999543
|
| >d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: 2,5-diketo-D-gluconic acid reductase A species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3.6e-41 Score=282.04 Aligned_cols=186 Identities=30% Similarity=0.452 Sum_probs=165.2
Q ss_pred CCCceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------C
Q 026625 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------L 81 (235)
Q Consensus 8 ~m~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~ 81 (235)
++|+++| +||++||+||||||++ +.+++.++|+.|+++|||+||||+.|| +|+.+|++|++ .
T Consensus 1 ~ip~~~l-~tG~~vs~iglGt~~~--------~~~~~~~~i~~A~d~Gin~~DTA~~Yg---sE~~~G~~l~~~~~~~~~ 68 (284)
T d1vp5a_ 1 QVPKVTL-NNGVEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIV 68 (284)
T ss_dssp CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEC-CCCCEecceeeECCCC--------CHHHHHHHHHHHHHcCCCEEEcCcccC---CHHHHHHHHHhhhccccc
Confidence 4789999 6999999999999975 468899999999999999999999999 79999999987 5
Q ss_pred CCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccEEE
Q 026625 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG 161 (235)
Q Consensus 82 ~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG 161 (235)
.|+++++++|.+... .+++.+++++++||+|||+||||++++|+|+. ..++++++|++|+++|+||+||
T Consensus 69 ~~~~~~i~~~~~~~~---------~~~~~~~~~~~~SL~rL~~d~iD~~~~H~p~~--~~~~~~~al~~l~~~GkIr~iG 137 (284)
T d1vp5a_ 69 RREELFVTTKLWVSD---------VGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIG 137 (284)
T ss_dssp CGGGCEEEEEECGGG---------CSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEEEE
T ss_pred ccccccccccccccc---------cCcHHHHHHHHHHHHHhccCchhhhhcccccc--chhhHHHHHHHHhhCCeEeEEe
Confidence 788999999987654 56899999999999999999999999999864 5789999999999999999999
Q ss_pred eCCCCHHHHHHHHhcC--CeeEEeeccCcccccccchHHHHHHHhCCeEEecccCcccc
Q 026625 162 LSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 218 (235)
Q Consensus 162 vSn~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 218 (235)
+|||+++++.++.... .+..+|+.++..+. ...++++|.++|+.+++|+|+..+.
T Consensus 138 vSn~~~~~~~~~~~~~~~~~~~~q~~~~~~~~--~~~~~~~~~~~g~~~~~~~p~~~~~ 194 (284)
T d1vp5a_ 138 VSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQ--RQEEIEFMRNYNIQPEAWGPFAEGR 194 (284)
T ss_dssp EESCCHHHHHHHHHHCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTGGGG
T ss_pred eccCCHHHHHHHHhhccCCCchhhhhhhhhhh--hHHHHHHHHHcCCcccccCCccccc
Confidence 9999999999887764 45667777766655 4678999999999999999998764
|
| >d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: Aldose reductase (aldehyde reductase) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=8.2e-41 Score=284.71 Aligned_cols=191 Identities=28% Similarity=0.446 Sum_probs=167.5
Q ss_pred ceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-------CCC
Q 026625 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-------LPR 83 (235)
Q Consensus 11 ~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-------~~R 83 (235)
+++| |||.+||.||||||++ +++++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|
T Consensus 4 ~~~l-ntG~~is~lglGtw~~--------~~~~a~~~l~~A~~~Gin~~DTA~~Yg---sE~~lG~al~~~~~~~~~~~r 71 (324)
T d1hqta_ 4 CVLL-HTGQKMPLIGLGTWKS--------EPGQVKAAIKYALTVGYRHIDCAAIFG---NELEIGEALQETVGPGKAVPR 71 (324)
T ss_dssp EEEC-TTSCEEESBCBBCTTC--------CTTTHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHTTTBSSSSSBCG
T ss_pred EEEC-CCcCEehhheeECCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhcccceeec
Confidence 4555 9999999999999864 456889999999999999999999999 89999999986 568
Q ss_pred CCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-------------------CCCHHHH
Q 026625 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIEET 144 (235)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~~~~ 144 (235)
+++++++|..... .+++.+.+++++||++|++||||+|++|+|+. ..++++.
T Consensus 72 ~~~~~~~~~~~~~---------~~~~~~~~~~~~SL~rl~~d~idl~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 142 (324)
T d1hqta_ 72 EELFVTSKLWNTK---------HHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTIRYDATHYKDT 142 (324)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESCSSCBCCSSCSSCEETTTEECBCCCCHHHH
T ss_pred cccccCccccccc---------chhHHHHHHHHHHHhccccceeeeecccCCcccccCCCcccccccccccccccchhhH
Confidence 8899999886543 56899999999999999999999999999853 2457899
Q ss_pred HHHHHHHHHcCCccEEEeCCCCHHHHHHHHhcC--CeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCCCC
Q 026625 145 IGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 222 (235)
Q Consensus 145 ~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 222 (235)
+++|++|+++|+||+||+||+++.++.++.... .+.++|..++.... ..+++++|+++||++++|+||++|.++.+
T Consensus 143 ~~al~~l~~~G~Ir~iG~Sn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~gi~~~~~~pl~~g~~~~~ 220 (324)
T d1hqta_ 143 WKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLA--QNELIAHCQARGLEVTAYSPLGSSDRAWR 220 (324)
T ss_dssp HHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTCCTTCSSC
T ss_pred HHHHHHHHHcCCeeeecccCCCHHHHHHHhhhcccCccccccccchhhh--hHHHHHHHHHcCCCcccccCccccccccc
Confidence 999999999999999999999999999988774 45677777766555 47899999999999999999999999887
Q ss_pred CC
Q 026625 223 AV 224 (235)
Q Consensus 223 ~~ 224 (235)
..
T Consensus 221 ~~ 222 (324)
T d1hqta_ 221 DP 222 (324)
T ss_dssp CC
T ss_pred cc
Confidence 43
|
| >d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: NAD(P)-linked oxidoreductase family: Aldo-keto reductases (NADP) domain: FR-1 (fibroblast growth factor-induced) protein species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=9.5e-40 Score=276.88 Aligned_cols=190 Identities=23% Similarity=0.339 Sum_probs=164.1
Q ss_pred CceecCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc------CCC
Q 026625 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (235)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~------~~R 83 (235)
++.+| +||++||.||||||++ +++++.++|++|+++|||+||||+.|| +|+.+|++|++ +.|
T Consensus 2 ~~~~l-~tg~~ip~iGlGtw~~--------~~~~a~~~i~~Ald~Gin~fDTA~~YG---sE~~lG~~L~~~~~~~~~~~ 69 (315)
T d1frba_ 2 TFVEL-STKAKMPIVGLGTWKS--------PPNQVKEAVKAAIDAGYRHIDCAYAYC---NENEVGEAIQEKIKEKAVQR 69 (315)
T ss_dssp CEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCG
T ss_pred CEEEC-CCCCcccccceECCCC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHHhccccc
Confidence 47889 8999999999999864 679999999999999999999999999 79999999986 567
Q ss_pred CCEEEEeccccccCCCcccccCCCHHHHHHHHHHHHHHcCCCcccEEEeccCCC-------------------CCCHHHH
Q 026625 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIEET 144 (235)
Q Consensus 84 ~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~~~~ 144 (235)
++.++.+|..... .+++.+++++++||++|++++||+|++|+|+. ..++.++
T Consensus 70 ~~~~~~~~~~~~~---------~~~~~v~~~~~~sL~rl~~~~iD~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 140 (315)
T d1frba_ 70 EDLFIVSKLWPTC---------FEKKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPGKELFPKDDQGRILTSKTTFLEA 140 (315)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSSCBCCSSCSSCBCTTSCBCBCSCCHHHH
T ss_pred ccccccccccccc---------cchHHHHHHHHHhhhcccchhhhhhhccCCCCCCCcccccccccccccccccCCHHHH
Confidence 7888888876543 56899999999999999999999999999853 2347899
Q ss_pred HHHHHHHHHcCCccEEEeCCCCHHHHHHHHhcC----CeeEEeeccCcccccccchHHHHHHHhCCeEEecccCccccCC
Q 026625 145 IGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFG 220 (235)
Q Consensus 145 ~~~l~~l~~~G~ir~iGvSn~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~ 220 (235)
|++|++|+++|+||+||+||++.+++++++... .+..+|+.++. ...+..++++|+++|+++++|+||++|.+.
T Consensus 141 ~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~i~~~~~~pl~~g~~~ 218 (315)
T d1frba_ 141 WEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHP--YLTQEKLIQYCHSKGISVTAYSPLGSPDRP 218 (315)
T ss_dssp HHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBT--TBCCHHHHHHHHHTTCEEEEESTTCCTTST
T ss_pred HHHHHHHHHCCCccccccccccHHHHHHHHHHhhhcccccccccccCc--hhhhHHHHHHHHHcCCcccccccccccccc
Confidence 999999999999999999999999999988752 33455555544 434578999999999999999999999888
Q ss_pred CC
Q 026625 221 GK 222 (235)
Q Consensus 221 ~~ 222 (235)
..
T Consensus 219 ~~ 220 (315)
T d1frba_ 219 SA 220 (315)
T ss_dssp TC
T ss_pred cc
Confidence 76
|
| >d1sjda1 c.1.11.2 (A:126-367) N-acylamino acid racemase {Amycolatopsis sp. [TaxId: 37632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Amycolatopsis sp. [TaxId: 37632]
Probab=92.64 E-value=0.69 Score=34.78 Aligned_cols=154 Identities=11% Similarity=0.052 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
+.++..+.++.+++.|++.|=.-- |....-+.+ +++++.-.+++.|..-.... .+.+...+ +.
T Consensus 16 ~~~~~~~~~~~~~~~Gf~~~Kikv--g~~~Di~~i-~~ir~~~g~~~~l~vDaN~~----------~~~~~a~~-~~--- 78 (242)
T d1sjda1 16 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPV-RAVRERFGDDVLLQVDANTA----------YTLGDAPQ-LA--- 78 (242)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHH-HHHHHHHCTTSEEEEECTTC----------CCGGGHHH-HH---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEC--CchhHHHHH-HHHHHHhCCCeeEeeccccc----------cchhhhhH-Hh---
Confidence 578888888999999999864322 222222233 34454223444444433221 22222221 22
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cchH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~l 197 (235)
+| +..+++++..|-... -++.+.++++.-.+. ..|=+.++..++.++++...++++|+..+..-.-. -..+
T Consensus 79 -~l--~~~~~~~iEeP~~~~----d~~~~~~l~~~~~~pia~gE~~~~~~~~~~~~~~~~~d~~~~d~~~~GGit~~~~i 151 (242)
T d1sjda1 79 -RL--DPFGLLLIEQPLEEE----DVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRV 151 (242)
T ss_dssp -TT--GGGCCSEEECCSCTT----CHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred -hh--hhhhhHHHHhhhhhh----hHHHHHHHHhccCcccccccccccchhhhhhhhcCccCEEEeccccCccchhhhHH
Confidence 23 334566777774433 356677888776665 33556788999999999888999999876544211 2678
Q ss_pred HHHHHHhCCeEEecccCccc
Q 026625 198 VPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (235)
.+.|+++|+.+...+....+
T Consensus 152 ~~~A~~~~i~~~~h~~~~~~ 171 (242)
T d1sjda1 152 HDVCAAHGIPVWCGGMIETG 171 (242)
T ss_dssp HHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHCCCEEeecccccch
Confidence 99999999999988766543
|
| >d1kcza1 c.1.11.2 (A:161-413) beta-Methylaspartase {Clostridium tetanomorphum [TaxId: 1553]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: beta-Methylaspartase species: Clostridium tetanomorphum [TaxId: 1553]
Probab=92.07 E-value=0.97 Score=34.55 Aligned_cols=103 Identities=11% Similarity=0.034 Sum_probs=72.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc----CC-c-cEEEeCCCCHHHHHHHHhcCCe
Q 026625 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE----GK-I-KYIGLSEASPDTIRRAHAVHPI 179 (235)
Q Consensus 106 ~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~----G~-i-r~iGvSn~~~~~l~~~~~~~~~ 179 (235)
.+++...+-+ ..|.+...+| ++ ++..|-...+..+.++.|.++++. |- | -..+=|-++++++.++++..-.
T Consensus 89 ~~~~eai~~~-~~L~~~~~~y-~i-~iEqP~~~~d~~~~~e~~a~lr~~~~~~g~~vpI~~DE~~~~~~d~~~~i~~~a~ 165 (253)
T d1kcza1 89 VDIKAMADYI-QTLAEAAKPF-HL-RIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAG 165 (253)
T ss_dssp TCHHHHHHHH-HHHHHHHTTS-CE-EEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCS
T ss_pred CCHHHHHHHH-HHHHHhcCCC-Cc-eEecCCCCccHhhHHHHHHHHHHHHhccCCccceeccccccCHHHHHHHHHhCCc
Confidence 4555555444 3555555666 55 688887777777778888888764 22 2 2234467889999999998888
Q ss_pred eEEeeccCccccccc-chHHHHHHHhCCeEEec
Q 026625 180 TAVQLEWSLWARDIE-NEIVPLCRELGIGIVPY 211 (235)
Q Consensus 180 ~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~ 211 (235)
+++|+..+-+-.-.+ -+++.+|+++|+.++.-
T Consensus 166 d~v~iK~~k~GGi~~al~~~~~a~~~Gi~~~vg 198 (253)
T d1kcza1 166 HMVQIKTPDLGGVNNIADAIMYCKANGMGAYCG 198 (253)
T ss_dssp SEEEECTGGGSSTHHHHHHHHHHHHTTCEEEEC
T ss_pred CeeeccccccCCHHHHHHHHHHHHHcCCcEEEc
Confidence 999998875443222 67899999999998853
|
| >d2chra1 c.1.11.2 (A:127-370) Chlormuconate cycloisomerase {Alcaligenes eutrophus [TaxId: 106590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Chlormuconate cycloisomerase species: Alcaligenes eutrophus [TaxId: 106590]
Probab=91.85 E-value=1.4 Score=33.17 Aligned_cols=158 Identities=9% Similarity=0.034 Sum_probs=94.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 119 (235)
++++..+.++...+.|++.|=.=-...+-..+...=+++++.-.+++.|..-.... .+.+...+-+ +.|
T Consensus 17 ~~~~~~~~~~~~~~~Gf~~~KiKvG~~~~~~D~~~v~~ir~~~g~~~~l~vDaN~~----------~~~~~A~~~~-~~l 85 (244)
T d2chra1 17 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQA----------WDEQVASVYI-PEL 85 (244)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHHHHHHHHTTTTSEEEEECTTC----------CCTHHHHHHH-HHH
T ss_pred cHHHHHHHHHHHHhCCCCEEEEEcCCCCHHHHHHHHHHHHHhcCCCceEEEeCCCC----------cchHHHHHHH-HHH
Confidence 56777788788888999998763222111111122234554223344443322211 2333333322 344
Q ss_pred HHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cchH
Q 026625 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENEI 197 (235)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~l 197 (235)
+.+ +++++..|-+.. -++.+.+|++.-.|. ..|=+-++...+.++++...++++|+..+.+-.-. -..+
T Consensus 86 ~~~-----~i~~iEeP~~~~----d~~~~~~l~~~~~ipia~~E~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~~i 156 (244)
T d2chra1 86 EAL-----GVELIEQPVGRE----NTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKI 156 (244)
T ss_dssp HTT-----TCCEEECCSCSS----CHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHH
T ss_pred hhh-----hHHHHhhhhhhc----cchhhhhhccceeeeeeecccccccchhhhhhhcceeEEEeeccccccchHHHHHH
Confidence 444 456677664432 356777888775554 44667788999999999888999999866543211 2679
Q ss_pred HHHHHHhCCeEEecccCccc
Q 026625 198 VPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 198 ~~~~~~~gi~v~a~spl~~G 217 (235)
.+.|+++|+.++..+....+
T Consensus 157 ~~~a~~~gi~~~~~~~~~~~ 176 (244)
T d2chra1 157 AAVAEASGIASYGGTMLDST 176 (244)
T ss_dssp HHHHHHHTCEECCCCCSCCH
T ss_pred HHHHHHcCCCeeeccccccc
Confidence 99999999998776665543
|
| >d1jpma1 c.1.11.2 (A:126-359) L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: L-Ala-D/L-Glu epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=91.57 E-value=1.9 Score=31.95 Aligned_cols=158 Identities=8% Similarity=0.047 Sum_probs=94.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHH--HHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILL--GKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~l--G~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 117 (235)
++++..+.++.+++.|++.|=.=- |...-++-+ =+++++.--+++.|.-=... ..+.+.. .+
T Consensus 15 ~pe~~~~~a~~~~~~G~~~~Kiki--g~~~~~~d~~~i~~ir~~~g~~~~i~vD~N~----------~~~~~~a----~~ 78 (234)
T d1jpma1 15 SPEEMAADAENYLKQGFQTLKIKV--GKDDIATDIARIQEIRKRVGSAVKLRLDANQ----------GWRPKEA----VT 78 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEC--SSSCHHHHHHHHHHHHHHHGGGSEEEEECTT----------CSCHHHH----HH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEC--CCCCHHHHHHHHHHHHHHcCchhhhhhhccc----------ccchHHH----HH
Confidence 568888999999999999885421 111122211 12233211112222221111 1333332 22
Q ss_pred HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccc-ccc
Q 026625 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IEN 195 (235)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~ 195 (235)
.++.|.-..++++++..|-... .++.+.++++.-.+. ..|=+-++...+.++++...++++|+..+..-.- .-.
T Consensus 79 ~~~~le~~~~~i~~~EeP~~~~----d~~~~~~l~~~~~~pia~gE~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~ 154 (234)
T d1jpma1 79 AIRKMEDAGLGIELVEQPVHKD----DLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAE 154 (234)
T ss_dssp HHHHHHHTTCCEEEEECCSCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHH
T ss_pred HHHHHHhccCceeeecCCcccc----CHHHHHHhhccccceeecccccccchhhhhhhccCCcCeEEEeeecCCCHHHHH
Confidence 3444433346788888775443 357777777765443 4566778899999999888899999976544321 126
Q ss_pred hHHHHHHHhCCeEEecccCccc
Q 026625 196 EIVPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 196 ~l~~~~~~~gi~v~a~spl~~G 217 (235)
.+.+.|+++|+.++..+.+..+
T Consensus 155 ~i~~~a~~~g~~~~~~~~~~~~ 176 (234)
T d1jpma1 155 KINAMAEACGVECMVGSMIETK 176 (234)
T ss_dssp HHHHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHHhcCeeEeecccccCC
Confidence 7899999999999877655443
|
| >d1r0ma1 c.1.11.2 (A:133-375) N-acylamino acid racemase {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Deinococcus radiodurans [TaxId: 1299]
Probab=91.12 E-value=1.8 Score=32.29 Aligned_cols=152 Identities=16% Similarity=0.143 Sum_probs=94.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
++++..+.++.+++.|++.|=.=. |.+...+.+. ++++ .+.-.+.|=.-.+ .+.+...+ +
T Consensus 16 ~~e~~~~~~~~~~~~G~~~~KiKv--g~~~D~~~v~-~ir~~~~d~~l~vD~n~~------------~~~~~a~~-~--- 76 (243)
T d1r0ma1 16 DEQATVDLVRRHVEQGYRRIKLKI--KPGWDVQPVR-ATREAFPDIRLTVDANSA------------YTLADAGR-L--- 76 (243)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHHH-HHHHHCTTSCEEEECTTC------------CCGGGHHH-H---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEc--CcchhHHHHH-HHHHhccCceEEEecccc------------CchHHHHH-h---
Confidence 678888999999999999875421 2223344444 4555 5422222221111 22222211 2
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
+.| .-.+++++..|-+.. .++.+.++++.-.+. +.|=+.++..++..+++...++++|+..+.+-.-.+ ..
T Consensus 77 -~~l--~~~~~~~iEeP~~~~----d~~~~~~l~~~~~ipia~gE~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~~ 149 (243)
T d1r0ma1 77 -RQL--DEYDLTYIEQPLAWD----DLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRR 149 (243)
T ss_dssp -HTT--GGGCCSCEECCSCTT----CSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHH
T ss_pred -hhh--hhccchhhhhhcccc----chHHHHHHhhcCCcccccccchhhhhhhhhhhhcccccceecccceeccHHHHHH
Confidence 222 234566676664432 356677777665444 446677889999999998889999998765543222 67
Q ss_pred HHHHHHHhCCeEEecccCccc
Q 026625 197 IVPLCRELGIGIVPYCPLGRG 217 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl~~G 217 (235)
+.+.|+++|+.++..+++..+
T Consensus 150 i~~~A~~~gi~v~~h~~~~~~ 170 (243)
T d1r0ma1 150 VHDVAQSFGAPVWCGGMLESG 170 (243)
T ss_dssp HHHHHHHTTCCEEECCCCCCH
T ss_pred HHHHHHHCCCceecccccccc
Confidence 999999999999988776543
|
| >d1nu5a1 c.1.11.2 (A:127-369) Chlormuconate cycloisomerase {Pseudomonas sp. p51 [TaxId: 65067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Chlormuconate cycloisomerase species: Pseudomonas sp. p51 [TaxId: 65067]
Probab=90.44 E-value=2.3 Score=31.73 Aligned_cols=155 Identities=11% Similarity=0.021 Sum_probs=93.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHH--HHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEIL--LGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~--lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 117 (235)
++++..+.++...+.|++.|=.=-... .-++- .=+++++.-.+++.|.--... ..+.+...+ +-+
T Consensus 17 ~~~~~~e~~~~~~~~G~~~~KiKvG~~--~~~~Di~~v~~ir~~~g~~~~l~vDaN~----------~~~~~~A~~-~~~ 83 (243)
T d1nu5a1 17 TARDIDSALEMIETRRHNRFKVKLGAR--TPAQDLEHIRSIVKAVGDRASVRVDVNQ----------GWDEQTASI-WIP 83 (243)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEECSSS--CHHHHHHHHHHHHHHHGGGCEEEEECTT----------CCCHHHHHH-HHH
T ss_pred hHHHHHHHHHHHHhCCCCEEEEEeCCC--CHHHHHHHHHHHHHHhCcccceEEECCC----------CccchhHHH-HHH
Confidence 566777777777788999986532111 12221 223343311233333322211 234444332 224
Q ss_pred HHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cc
Q 026625 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-EN 195 (235)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~ 195 (235)
.|+.++ ++++..|-+.. .++.+.+|++.-.|. ..|-+.++..++..+++...++++|+..+..-.-. -.
T Consensus 84 ~l~~~~-----~~~iEeP~~~~----~~~~~~~l~~~~~ipIa~gE~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~ 154 (243)
T d1nu5a1 84 RLEEAG-----VELVEQPVPRA----NFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANTL 154 (243)
T ss_dssp HHHHHT-----CCEEECCSCTT----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHH
T ss_pred Hhcchh-----hhhhhhhhhhc----cccccccchhccccccccccccccchhhhhccccccccccccccccccchHHHH
Confidence 455554 45666664433 256788888776654 34556788999999999888899999876543211 26
Q ss_pred hHHHHHHHhCCeEEecccCcc
Q 026625 196 EIVPLCRELGIGIVPYCPLGR 216 (235)
Q Consensus 196 ~l~~~~~~~gi~v~a~spl~~ 216 (235)
.+...|+++|+.+...+.+..
T Consensus 155 ~i~~~a~~~gi~~~~~~~~~s 175 (243)
T d1nu5a1 155 KVAAVAEAAGISSYGGTMLDS 175 (243)
T ss_dssp HHHHHHHHHTCEEEECCSSCC
T ss_pred HHHHHHHHcCCCcccccccch
Confidence 789999999999988776654
|
| >d1wuea1 c.1.11.2 (A:1127-1367) N-acylamino acid racemase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Enterococcus faecalis [TaxId: 1351]
Probab=90.42 E-value=2.4 Score=31.47 Aligned_cols=150 Identities=13% Similarity=0.074 Sum_probs=92.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+.++.+++.|++.|=.=- |.+...+.+ +++++ .+ + +.|.-=... .++.+...+ +
T Consensus 16 ~~~~~~~~~~~~~~~G~~~~Kikv--g~~~D~~~v-~~ir~~~~-d-~~l~vDaN~----------~~~~~~a~~-~--- 76 (241)
T d1wuea1 16 DLPQLLKQVQLAVEKGYQRVKLKI--RPGYDVEPV-ALIRQHFP-N-LPLMVDANS----------AYTLADLPQ-L--- 76 (241)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHCT-T-SCEEEECTT----------CCCGGGHHH-H---
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEc--CccHHHHHH-HHHHHhcc-c-cceeecccc----------cCCHHHhhh-h---
Confidence 567888899999999999875421 222222333 45555 43 2 333221111 122332221 2
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~ 196 (235)
.++- + .+++++..|-.. +.++.+.++++.-.+. +.|=+-++..++..+++...++++|+..+.+-.-. -..
T Consensus 77 -~~~~-~-~~i~~iEeP~~~----~~~~~~~~l~~~~~~pIa~gE~~~~~~~~~~~i~~~~~d~i~~d~~~~GGit~~~~ 149 (241)
T d1wuea1 77 -QRLD-H-YQLAMIEQPFAA----DDFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALK 149 (241)
T ss_dssp -HGGG-G-SCCSCEECCSCT----TCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred -hhhh-h-hhhhhhcCcccc----cchhhhhhhhcccccccccCcccccchhhhhhhhhhhhhhhccccccccCcHHHHH
Confidence 3331 2 466667666433 2356788888776665 34667789999999999888999999765433211 267
Q ss_pred HHHHHHHhCCeEEecccCc
Q 026625 197 IVPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl~ 215 (235)
+.+.|+++|+.+...+...
T Consensus 150 i~~~a~~~~i~v~~~~~~~ 168 (241)
T d1wuea1 150 IAAFCQENDLLVWLGGMFE 168 (241)
T ss_dssp HHHHHHHTTCEEEECCCCC
T ss_pred HHHHHHHcCCEEEeccccc
Confidence 8999999999998876543
|
| >d1kkoa1 c.1.11.2 (A:161-411) beta-Methylaspartase {Citrobacter amalonaticus [TaxId: 35703]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: beta-Methylaspartase species: Citrobacter amalonaticus [TaxId: 35703]
Probab=90.18 E-value=2.3 Score=32.25 Aligned_cols=103 Identities=15% Similarity=0.074 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc----CC-cc-EEEeCCCCHHHHHHHHhcCCe
Q 026625 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE----GK-IK-YIGLSEASPDTIRRAHAVHPI 179 (235)
Q Consensus 106 ~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~----G~-ir-~iGvSn~~~~~l~~~~~~~~~ 179 (235)
.+++...+.+. .|.+...+| ++ ++..|-+....++-|+.|.++.+. |. |. ..+=|-++.+.+.++++....
T Consensus 89 ~~~~~ai~~l~-~L~~~~~~~-~l-~IEqP~~~~~~~~d~~gl~~l~~~l~~~g~~vpI~~DE~~~t~~d~~~~i~~~a~ 165 (251)
T d1kkoa1 89 MDPVRCAEYIA-SLEKEAQGL-PL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSC 165 (251)
T ss_dssp TCHHHHHHHHH-HTGGGGTTS-CE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHH-HHHHhcCCC-ce-eecCCcccccchHHHHHHHHHHHHHhccCCCceEeccceeCCHHHHHHHHHhCCc
Confidence 34555444443 334444455 45 677776555566777777777654 42 43 234466788999999998889
Q ss_pred eEEeeccCccccccc-chHHHHHHHhCCeEEec
Q 026625 180 TAVQLEWSLWARDIE-NEIVPLCRELGIGIVPY 211 (235)
Q Consensus 180 ~~~q~~~n~~~~~~~-~~l~~~~~~~gi~v~a~ 211 (235)
+++|+..+-+-.-.+ .+++.+|+++|+.++.-
T Consensus 166 d~v~iK~~k~GGi~~a~~~~~~A~~~Gi~~~~g 198 (251)
T d1kkoa1 166 HMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQG 198 (251)
T ss_dssp SEEEECGGGGSSTHHHHHHHHHHHHHTCEEEEC
T ss_pred cceeccccccCCHHHHHHHHHHHHHCCCeEEEe
Confidence 999998876554322 67999999999998743
|
| >d1jdfa1 c.1.11.2 (A:138-446) D-glucarate dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: D-glucarate dehydratase species: Escherichia coli [TaxId: 562]
Probab=89.78 E-value=1.1 Score=35.32 Aligned_cols=157 Identities=11% Similarity=0.098 Sum_probs=92.8
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHH
Q 026625 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (235)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 116 (235)
.++++..+..+++++. |++.|-.=-.--....+...=+++++ .+..++.|=.-.+ .+.+ ++++
T Consensus 46 ~~p~~~~~~a~~~~~~~Gf~~~KiKvG~~~~~~di~~v~avr~~~pd~~l~vDaN~~------------~s~~---~Ai~ 110 (309)
T d1jdfa1 46 MTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNGA------------WSLN---EAIK 110 (309)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHCTTSCEEEECTTB------------BCHH---HHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHHHHHHCCCCeEEeeccCC------------CCHH---HHHH
Confidence 3667777777888876 99987431100011223333334554 5544554422211 2333 2332
Q ss_pred HHHHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCc-cEEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccccc
Q 026625 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIEN 195 (235)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~ 195 (235)
..+.| ++ +++++..|-.........+.+.+++++-.| -+.|=+.++..++..+++...++++|.....---..-.
T Consensus 111 -~~~~l--e~-~l~w~EEPv~~~d~~~~~~~l~~lr~~~~ipIa~gE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~~~ 186 (309)
T d1jdfa1 111 -IGKYL--KG-SLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSV 186 (309)
T ss_dssp -HHHHT--TT-TCSCEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBCCHHHHCHHHHH
T ss_pred -HHHHH--hh-cchhhhhhcccCcchhhHHHHHHhhcccccceecCcccchhhhhhhhhhhccceeeecccccccchHHH
Confidence 33455 33 566677664333333456777788776554 46677888999999999888888888763221111126
Q ss_pred hHHHHHHHhCCeEEecccC
Q 026625 196 EIVPLCRELGIGIVPYCPL 214 (235)
Q Consensus 196 ~l~~~~~~~gi~v~a~spl 214 (235)
.+.+.|+++|+.+...+..
T Consensus 187 kia~lA~~~gi~v~~H~~~ 205 (309)
T d1jdfa1 187 RVAQMCHEFGLTWGSHSDN 205 (309)
T ss_dssp HHHHHHHHHTCCCBCCCCS
T ss_pred HHHHHHHhcCCCccccCCC
Confidence 7889999999998877544
|
| >d1wufa1 c.1.11.2 (A:1127-1370) N-acylamino acid racemase {Listeria innocua [TaxId: 1642]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: N-acylamino acid racemase species: Listeria innocua [TaxId: 1642]
Probab=89.73 E-value=3 Score=31.07 Aligned_cols=150 Identities=14% Similarity=0.116 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCcHHHHHHHHHhc-CCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~lG~al~~-~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+.++.+++.|++.|=.=- |....-+.+ +++++ .+ ++.+.-=... .++.+... .
T Consensus 16 ~~e~~~~~~~~~~~~Gf~~~Kikv--g~~~D~~~v-~~ir~~~~--~~~l~vDaN~----------~~~~~~a~-~---- 75 (244)
T d1wufa1 16 NVETLLQLVNQYVDQGYERVKLKI--APNKDIQFV-EAVRKSFP--KLSLMADANS----------AYNREDFL-L---- 75 (244)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--BTTBSHHHH-HHHHTTCT--TSEEEEECTT----------CCCGGGHH-H----
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEe--CCcHHHHHH-HHHHHhcc--chhhhhhhhc----------cccchhhh-h----
Confidence 678888999999999999864321 222333344 46666 43 3333321111 12332221 1
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccE-EEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-ENE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~~ 196 (235)
+++| +..+++++..|-+.. -++.+.++++.-.+.- .|=+-++..++.++++..-++++|+..+-.-.-. -..
T Consensus 76 ~~~l--~~~~~~wiEeP~~~~----d~~~~~~l~~~~~~pia~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~k 149 (244)
T d1wufa1 76 LKEL--DQYDLEMIEQPFGTK----DFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALK 149 (244)
T ss_dssp HHTT--GGGTCSEEECCSCSS----CSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHH
T ss_pred hhcc--cccchhhhcCccccc----chhhhhccccccccccccCccccchhhhhhhccccccceeecccccccchhhHHH
Confidence 2333 345666777774433 3556778887765543 4567788999999999888899999766543321 267
Q ss_pred HHHHHHHhCCeEEecccCc
Q 026625 197 IVPLCRELGIGIVPYCPLG 215 (235)
Q Consensus 197 l~~~~~~~gi~v~a~spl~ 215 (235)
+.+.|+++|+.+...+...
T Consensus 150 i~~~a~~~gi~v~~h~~~~ 168 (244)
T d1wufa1 150 IAEYCALNEILVWCGGMLE 168 (244)
T ss_dssp HHHHHHHTTCEEEECCCCC
T ss_pred HHHHHHHcCCEEecCCCCC
Confidence 8899999999998876543
|
| >d1yeya1 c.1.11.2 (A:184-435) RTS beta protein {Xanthomonas campestris pv. campestris [TaxId: 340]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: RTS beta protein species: Xanthomonas campestris pv. campestris [TaxId: 340]
Probab=85.22 E-value=1.6 Score=32.95 Aligned_cols=151 Identities=12% Similarity=0.103 Sum_probs=88.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCC-cHHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPY-TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g-~sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
++++..+.++.+++.|++.|=.=- |.. ..+...=+++++.-.+++.|.--.... .+.+...+ .
T Consensus 15 s~ee~~~~a~~~~~~Gf~~~Kikv--G~~~~~di~~v~~vr~~~g~~~~l~vDaN~~----------~~~~~A~~----~ 78 (252)
T d1yeya1 15 SDEKLVRLAKEAVADGFRTIKLKV--GANVQDDIRRCRLARAAIGPDIAMAVDANQR----------WDVGPAID----W 78 (252)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEEC--CSCHHHHHHHHHHHHHHHCSSSEEEEECTTC----------CCHHHHHH----H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEC--CCCHHHHHHHHHHHHHHhCCCceEeeccccC----------cchHHHHH----H
Confidence 457788999999999999874321 111 122222234444112334443332221 23332222 2
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHc-C-CccEEEeCCCCHHHHHHHHhcCCeeEEeeccCcccccc-cc
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-G-KIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI-EN 195 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G-~ir~iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~-~~ 195 (235)
++.| +-++++++..|-...+ ++.+.+++++ . .--..|=+.++...+.++++..-++++|+..+-.-.-. -.
T Consensus 79 ~~~l--~~~~~~~iEeP~~~~d----~~~~~~~~~~~~~ipia~gE~~~~~~~~~~~i~~~a~d~~~~d~~~~GGit~~~ 152 (252)
T d1yeya1 79 MRQL--AEFDIAWIEEPTSPDD----VLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENL 152 (252)
T ss_dssp HHTT--GGGCCSCEECCSCTTC----HHHHHHHHHHSTTSCEECCTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHH
T ss_pred HHhh--hhcCceeecCCcchhh----HHHHHHHhhccCCCceeccccccchhhhhhHhhccccceeccccccccCchhhh
Confidence 3333 3456677776744433 3444444443 3 34455778899999999999988999999876543211 26
Q ss_pred hHHHHHHHhCCeEEecc
Q 026625 196 EIVPLCRELGIGIVPYC 212 (235)
Q Consensus 196 ~l~~~~~~~gi~v~a~s 212 (235)
.+...|+++|+.+...+
T Consensus 153 kia~~A~~~~i~v~~h~ 169 (252)
T d1yeya1 153 AILLLAAKFGVRVFPHA 169 (252)
T ss_dssp HHHHHHHHHTCEECCCC
T ss_pred HHHHHHHHcCCEEecCC
Confidence 78999999999987653
|
| >d2gdqa1 c.1.11.2 (A:119-374) Hypothetical protein YitF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Enolase C-terminal domain-like family: D-glucarate dehydratase-like domain: Hypothetical protein YitF species: Bacillus subtilis [TaxId: 1423]
Probab=82.93 E-value=7.5 Score=28.98 Aligned_cols=152 Identities=11% Similarity=0.026 Sum_probs=91.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCCCCCc-HHHHHHHHHhcCCCCCEEEEeccccccCCCcccccCCCHHHHHHHHHHH
Q 026625 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT-NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (235)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~-sE~~lG~al~~~~R~~~~I~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 118 (235)
+.++..+.++.+++.|++.|=.=-. +... .+...=+++++.-.+++.|..-.... .+.+. ++ +.
T Consensus 21 ~~~~~~~~~~~~~~~Gf~~~Kikvg-~~~~~~di~~v~avr~~~G~~~~l~vDan~~----------~~~~~---A~-~~ 85 (256)
T d2gdqa1 21 WISRSVSNVEAQLKKGFEQIKVKIG-GTSFKEDVRHINALQHTAGSSITMILDANQS----------YDAAA---AF-KW 85 (256)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEECS-SSCHHHHHHHHHHHHHHHCTTSEEEEECTTC----------CCHHH---HH-TT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECC-CCCHHHHHHHHHHHHHHcCCCeEEeeccccC----------CCHHH---HH-HH
Confidence 3466777888889999998854211 1111 11122245554212334443332211 23222 22 23
Q ss_pred HHHcCCCcccEEEeccCCCCCCHHHHHHHHHHHHHcCCccE-EEeCCCCHHHHHHHHhcCCeeEEeeccCccccccc-ch
Q 026625 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NE 196 (235)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvSn~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~-~~ 196 (235)
++.|. ++..+.++..|-... -++.+.+|++.-.+.- .|=+.++..++.++++...++++|+..+.+-.-.+ ..
T Consensus 86 ~~~l~-~~~~i~~~EeP~~~~----d~~~~~~l~~~~~ipIa~gE~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~ 160 (256)
T d2gdqa1 86 ERYFS-EWTNIGWLEEPLPFD----QPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRD 160 (256)
T ss_dssp HHHHT-TCSCEEEEECCSCSS----CHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred HHHHh-hcCceeEeccccccc----hHHHHHHHhhcccceeecCccccchhhHHHHHHhhcceeeeccccccccHHHHHH
Confidence 34443 345677888775433 4677888888776663 34567889999999999899999998776543212 67
Q ss_pred HHHHHHHhCCeEEec
Q 026625 197 IVPLCRELGIGIVPY 211 (235)
Q Consensus 197 l~~~~~~~gi~v~a~ 211 (235)
+.+.|+++||.+...
T Consensus 161 i~~~a~~~~i~v~~h 175 (256)
T d2gdqa1 161 CLQLARYFGVRASAH 175 (256)
T ss_dssp HHHHHHHHTCEECCC
T ss_pred HHHHHhhhccccccc
Confidence 899999999998654
|