Citrus Sinensis ID: 026656

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-----
MALPMILLLVPIFLIPIILHVQRYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIREDYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQYI
ccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHcccEEEEEcccccEEEEccHHHHHHHHHHcccccccccccccHHHHHcccccEEEccccHHHHHHHHHHHHHHccHHHHHccHHHHHcccccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHccccc
ccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEcccEcHHHcccccHHHHHHHHHHHHccEEEEEEccEEEEEEccHHHHHHHHccccccccEEcccHHHHHEEEccccEEEccccHHHHHHHHHHHHHHHcHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccc
MALPMILLLVPIFLIPIILHVQRYKtiksialppgprglpfignlhqfdysnpqNYFWRLskqygpmvslrlGSVPILVVSSAKMAEEVLKThdlqfcsrpallsqqkvsyngldvafapYNAYWREIRKICVVHLFnsnrvqsfrpiredyfpsigwvdNITGMIRRLERNFKEFDAFHQELIEEhldpariktdQEDIVDVLLQIWKQrgskvditWDHIKAVLMVKFHNQYI
MALPMILLLVPIFLIPIILHVQRYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNsnrvqsfrpiredyfpsigwvDNITGMIRRLERNFKEFDAFHQELIEEHldpariktDQEDIVDVLLQIWKqrgskvditWDHIKAVLMVKFHNQYI
MAlpmilllvpiflipiilHVQRYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIREDYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQYI
***PMILLLVPIFLIPIILHVQRYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIREDYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHN***
*ALPMILLLVPIFLIPIILH****************RGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIREDYFPSIGWVDNITGMIRRLERNFKEFDAFHQELI****************VDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQYI
MALPMILLLVPIFLIPIILHVQRYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIREDYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQYI
*ALPMILLLVPIFLIPIILHVQRYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIREDYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQYI
oooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALPMILLLVPIFLIPIILHVQRYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIREDYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQYI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query235 2.2.26 [Sep-21-2011]
O65782 499 Cytochrome P450 83B1 OS=A yes no 0.582 0.274 0.493 2e-39
Q6XQ14 511 2-methylbutanal oxime mon N/A no 0.859 0.395 0.338 1e-36
Q9LIP4 500 Cytochrome P450 71B36 OS= no no 0.502 0.236 0.546 3e-34
O81974 504 Cytochrome P450 71D8 OS=G no no 0.617 0.287 0.496 5e-34
Q9LIP6 500 Cytochrome P450 71B34 OS= no no 0.659 0.31 0.440 3e-33
Q9LIP5 500 Cytochrome P450 71B35 OS= no no 0.617 0.29 0.472 4e-33
Q9SAE3 490 Cytochrome P450 71B28 OS= no no 0.506 0.242 0.558 8e-33
O48923 510 Cytochrome P450 71D10 OS= no no 0.557 0.256 0.492 3e-32
Q9STK8 490 Cytochrome P450 71A25 OS= no no 0.629 0.302 0.463 6e-32
C0SJS2 473 Psoralen synthase (Fragme N/A no 0.902 0.448 0.312 6e-32
>sp|O65782|C83B1_ARATH Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1 Back     alignment and function desciption
 Score =  162 bits (409), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 72/146 (49%), Positives = 105/146 (71%)

Query: 6   ILLLVPIFLIPIILHVQRYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYG 65
           +LL++   +        R  T KS+ LPPGP+GLP IGNLHQ +  NPQ++ +RLSK YG
Sbjct: 3   LLLIIAGLVAAAAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYG 62

Query: 66  PMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYW 125
           P+ ++++G   + V+SSA++A+E+LKT DL F +RP L  QQ +SY G ++ F  Y AY+
Sbjct: 63  PIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYY 122

Query: 126 REIRKICVVHLFNSNRVQSFRPIRED 151
           RE+RK+C+V+LF+ NRV SFRP+RE+
Sbjct: 123 REMRKMCMVNLFSPNRVASFRPVREE 148
Involved in the metabolism of aromatic oximes. Catalyzes the oxime metabolizing step in indole glucosinolate biosynthesis by converting indole-3-acetaldoxime into indole-3-S-alkyl-thiohydroximate. Probably required for glucosinolate activation in response to pathogens. Functions in auxin homeostasis because indole-3-acetaldoxime also serves as a precursor for auxin biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|Q6XQ14|C71E7_MANES 2-methylbutanal oxime monooxygenase OS=Manihot esculenta GN=CYP71E7 PE=1 SV=1 Back     alignment and function description
>sp|Q9LIP4|C71BX_ARATH Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=3 SV=1 Back     alignment and function description
>sp|O81974|C71D8_SOYBN Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1 Back     alignment and function description
>sp|Q9LIP6|C71BV_ARATH Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1 Back     alignment and function description
>sp|Q9LIP5|C71BW_ARATH Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAE3|C71BS_ARATH Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1 Back     alignment and function description
>sp|O48923|C71DA_SOYBN Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1 Back     alignment and function description
>sp|Q9STK8|C71AP_ARATH Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1 Back     alignment and function description
>sp|C0SJS2|C71AJ_PASSA Psoralen synthase (Fragment) OS=Pastinaca sativa GN=CYP71AJ3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query235
255538870 497 cytochrome P450, putative [Ricinus commu 0.604 0.285 0.710 3e-57
224062041 513 cytochrome P450 [Populus trichocarpa] gi 0.634 0.290 0.644 2e-50
224062037 513 cytochrome P450 [Populus trichocarpa] gi 0.612 0.280 0.650 2e-49
255538866 496 cytochrome P450, putative [Ricinus commu 0.451 0.213 0.766 5e-49
224097756 504 cytochrome P450 [Populus trichocarpa] gi 0.621 0.289 0.639 4e-48
224065988 504 cytochrome P450 [Populus trichocarpa] gi 0.621 0.289 0.639 4e-48
308190436 491 cytochrome P450 mono-oxygenase [Artemisi 0.948 0.454 0.409 1e-47
225458057 494 PREDICTED: cytochrome P450 71A1 [Vitis v 0.795 0.378 0.435 8e-47
357438237 591 Cytochrome P450 [Medicago truncatula] gi 0.519 0.206 0.642 1e-44
85068658 495 CYP71AT2v2 [Nicotiana tabacum] 0.6 0.284 0.602 2e-44
>gi|255538870|ref|XP_002510500.1| cytochrome P450, putative [Ricinus communis] gi|223551201|gb|EEF52687.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 103/145 (71%), Positives = 129/145 (88%), Gaps = 3/145 (2%)

Query: 6   ILLLVPIFLIPIILHVQRYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYG 65
           ++L +P+FL  ++   Q+ KT ++ +LPPGP+GLP IGNLHQFD S PQNY W+LS++YG
Sbjct: 7   LVLALPVFLSFLL---QKLKTRRNSSLPPGPKGLPLIGNLHQFDQSAPQNYLWKLSQKYG 63

Query: 66  PMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYW 125
           P++SLRLGSVPILVVSSAKMA+++LKT+DL FCSRP +L QQK+SYNGLD+AFAPYN+YW
Sbjct: 64  PLMSLRLGSVPILVVSSAKMAKDILKTYDLTFCSRPPVLGQQKLSYNGLDLAFAPYNSYW 123

Query: 126 REIRKICVVHLFNSNRVQSFRPIRE 150
           RE+RKICVVHLFNSN+VQSFRPIRE
Sbjct: 124 REMRKICVVHLFNSNKVQSFRPIRE 148

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224062041|ref|XP_002300725.1| cytochrome P450 [Populus trichocarpa] gi|222842451|gb|EEE79998.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224062037|ref|XP_002300723.1| cytochrome P450 [Populus trichocarpa] gi|222842449|gb|EEE79996.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255538866|ref|XP_002510498.1| cytochrome P450, putative [Ricinus communis] gi|223551199|gb|EEF52685.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224097756|ref|XP_002334586.1| cytochrome P450 [Populus trichocarpa] gi|222873361|gb|EEF10492.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224065988|ref|XP_002301993.1| cytochrome P450 [Populus trichocarpa] gi|222843719|gb|EEE81266.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|308190436|gb|ADO16183.1| cytochrome P450 mono-oxygenase [Artemisia annua] Back     alignment and taxonomy information
>gi|225458057|ref|XP_002278387.1| PREDICTED: cytochrome P450 71A1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357438237|ref|XP_003589394.1| Cytochrome P450 [Medicago truncatula] gi|355478442|gb|AES59645.1| Cytochrome P450 [Medicago truncatula] Back     alignment and taxonomy information
>gi|85068658|gb|ABC69409.1| CYP71AT2v2 [Nicotiana tabacum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query235
TAIR|locus:2079311 500 CYP71B36 ""cytochrome P450, fa 0.544 0.256 0.503 1.1e-44
TAIR|locus:2065254 500 CYP71B9 ""cytochrome P450, fam 0.502 0.236 0.529 7.6e-44
TAIR|locus:2031900 502 CYP71B2 ""cytochrome P450, fam 0.548 0.256 0.534 6.7e-43
TAIR|locus:2165595 502 CYP71B10 ""cytochrome P450, fa 0.497 0.233 0.5 1.3e-42
TAIR|locus:2079316 500 CYP71B37 ""cytochrome P450, fa 0.502 0.236 0.495 1.5e-42
TAIR|locus:2031820 504 CYP71B7 ""cytochrome P450, fam 0.506 0.236 0.483 2.7e-42
TAIR|locus:2031915 490 CYP71B28 ""cytochrome P450, fa 0.506 0.242 0.558 5.9e-42
TAIR|locus:2031805 490 CYP71B29 ""cytochrome P450, fa 0.493 0.236 0.525 6.1e-42
TAIR|locus:2079251 500 CYP71B34 ""cytochrome P450, fa 0.544 0.256 0.465 1.1e-41
TAIR|locus:2093561 500 CYP71B26 ""cytochrome P450, fa 0.536 0.252 0.449 1.2e-41
TAIR|locus:2079311 CYP71B36 ""cytochrome P450, family 71, subfamily B, polypeptide 36"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 360 (131.8 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
 Identities = 66/131 (50%), Positives = 94/131 (71%)

Query:    33 PPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKT 92
             PP P G P IGNLHQ     P    WRLSK+YG ++ L+ GS+P +VVSS++ A++VLK 
Sbjct:    32 PPSPPGFPIIGNLHQLG-ELPHQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKI 90

Query:    93 HDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIREDY 152
             HDL  CSRP+L   + +SYN LD+AF+P++ YW+E+R+ICV  LF+  RVQSF+PI+ED 
Sbjct:    91 HDLHCCSRPSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDE 150

Query:   153 FPSIGWVDNIT 163
                +  +D+++
Sbjct:   151 VKKL--IDSVS 159
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0019825 "oxygen binding" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2065254 CYP71B9 ""cytochrome P450, family 71, subfamily B, polypeptide 9"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031900 CYP71B2 ""cytochrome P450, family 71, subfamily B, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165595 CYP71B10 ""cytochrome P450, family 71, subfamily B, polypeptide 10"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079316 CYP71B37 ""cytochrome P450, family 71, subfamily B, polypeptide 37"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031820 CYP71B7 ""cytochrome P450, family 71 subfamily B, polypeptide 7"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031915 CYP71B28 ""cytochrome P450, family 71, subfamily B, polypeptide 28"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031805 CYP71B29 ""cytochrome P450, family 71, subfamily B, polypeptide 29"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079251 CYP71B34 ""cytochrome P450, family 71, subfamily B, polypeptide 34"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093561 CYP71B26 ""cytochrome P450, family 71, subfamily B, polypeptide 26"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query235
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 3e-46
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 4e-36
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 9e-30
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 1e-29
PLN02183 516 PLN02183, PLN02183, ferulate 5-hydroxylase 5e-29
pfam00067 461 pfam00067, p450, Cytochrome P450 4e-21
PLN00110 504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 9e-19
PLN02394 503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 6e-18
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 9e-16
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 1e-15
PLN02655 466 PLN02655, PLN02655, ent-kaurene oxidase 2e-12
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 7e-11
PLN02971 543 PLN02971, PLN02971, tryptophan N-hydroxylase 4e-09
PLN03018 534 PLN03018, PLN03018, homomethionine N-hydroxylase 4e-08
PLN00110 504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 2e-07
PTZ00404 482 PTZ00404, PTZ00404, cytochrome P450; Provisional 7e-07
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 5e-06
PLN02183 516 PLN02183, PLN02183, ferulate 5-hydroxylase 6e-05
PLN02196 463 PLN02196, PLN02196, abscisic acid 8'-hydroxylase 8e-05
PLN02987 472 PLN02987, PLN02987, Cytochrome P450, family 90, su 0.001
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information 
 Score =  160 bits (405), Expect = 3e-46
 Identities = 71/146 (48%), Positives = 104/146 (71%)

Query: 6   ILLLVPIFLIPIILHVQRYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYG 65
           + L++   +        R  T KS+ LPPGP+GLP IGNLHQ +  NPQ++ +RLSK YG
Sbjct: 3   LFLIIAALVAAAAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYG 62

Query: 66  PMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYW 125
           P+ ++++G   + V+SSA++A+E+LKT DL F +RP L  QQ +SY G ++ F  Y AY+
Sbjct: 63  PIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYY 122

Query: 126 REIRKICVVHLFNSNRVQSFRPIRED 151
           RE+RK+C+V+LF+ NRV SFRP+RE+
Sbjct: 123 REMRKMCMVNLFSPNRVASFRPVREE 148

Length = 499
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase Back     alignment and domain information
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 235
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
PLN03234 499 cytochrome P450 83B1; Provisional 99.97
PLN02687 517 flavonoid 3'-monooxygenase 99.97
PLN03112 514 cytochrome P450 family protein; Provisional 99.96
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 99.96
PLN02183 516 ferulate 5-hydroxylase 99.96
PLN02966 502 cytochrome P450 83A1 99.95
PLN00168 519 Cytochrome P450; Provisional 99.95
PLN02971 543 tryptophan N-hydroxylase 99.95
PTZ00404 482 cytochrome P450; Provisional 99.94
PLN02196 463 abscisic acid 8'-hydroxylase 99.94
PLN02394 503 trans-cinnamate 4-monooxygenase 99.94
PLN02290 516 cytokinin trans-hydroxylase 99.94
PLN02774 463 brassinosteroid-6-oxidase 99.94
PLN02655 466 ent-kaurene oxidase 99.94
PLN02500 490 cytochrome P450 90B1 99.93
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.93
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.93
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.92
PLN02302 490 ent-kaurenoic acid oxidase 99.92
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 99.91
PLN03018 534 homomethionine N-hydroxylase 99.9
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.9
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.89
PLN03195 516 fatty acid omega-hydroxylase; Provisional 99.88
PLN02936 489 epsilon-ring hydroxylase 99.84
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.84
PLN02738 633 carotene beta-ring hydroxylase 99.81
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.75
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.69
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.61
PLN02648 480 allene oxide synthase 99.59
PHA0304968 IMV membrane protein; Provisional 83.0
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.8e-32  Score=218.88  Aligned_cols=203  Identities=41%  Similarity=0.754  Sum_probs=164.6

Q ss_pred             CCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCc-hhHHHH
Q 026656           30 IALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPA-LLSQQK  108 (235)
Q Consensus        30 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~-~~~~~~  108 (235)
                      .+.||||+++|++||++++....+|..+.++.++|||++.+++|..++|+|+|+++++|++.+++..|++||. ....+.
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            8899999999999999999433499999999999999999999999999999999999999999999999997 334566


Q ss_pred             hhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhccc--------------------chh------------------
Q 026656          109 VSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRP--------------------IRE------------------  150 (235)
Q Consensus       109 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~--------------------~~~------------------  150 (235)
                      +.+++.|++++.+|+.|+.+||+.+...|+...++....                    .++                  
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~f  184 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRMLF  184 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHHh
Confidence            665689999997899999999999888888776544311                    111                  


Q ss_pred             --------------------------------cccc-ccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCc
Q 026656          151 --------------------------------DYFP-SIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQ  197 (235)
Q Consensus       151 --------------------------------~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  197 (235)
                                                      +++| ++.++.+..+..++......++.+++++.|+++++..++ ++.
T Consensus       185 G~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~~-~~~  263 (489)
T KOG0156|consen  185 GRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIGD-EEG  263 (489)
T ss_pred             CCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCC
Confidence                                            5677 455544334556677777777999999999999875411 333


Q ss_pred             ccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656          198 EDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY  234 (235)
Q Consensus       198 ~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~  234 (235)
                      .|++|.+++..++++.. .+|+++|...|.++++||.
T Consensus       264 ~D~vD~lL~~~~~~~~~-~~t~~~i~~~~~dl~~AGt  299 (489)
T KOG0156|consen  264 RDFVDALLKLMKEEKAE-GLTDDHLKALILDLFLAGT  299 (489)
T ss_pred             CcHHHHHHHhhcccccC-CCCHHHHHHHHHHHHhccc
Confidence            89999999987654311 2999999999999999995

>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>PHA03049 IMV membrane protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query235
1dt6_A 473 Structure Of Mammalian Cytochrome P450 2c5 Length = 1e-10
1pq2_A 476 Crystal Structure Of Human Drug Metabolizing Cytoch 8e-10
3pm0_A 507 Structural Characterization Of The Complex Between 1e-09
3e4e_A 476 Human Cytochrome P450 2e1 In Complex With The Inhib 1e-09
3ruk_A 494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 3e-09
4i8v_A 491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 3e-09
2q6n_A 478 Structure Of Cytochrome P450 2b4 With Bound 1-(4- C 5e-09
4h1n_A 479 Crystal Structure Of P450 2b4 F297a Mutant In Compl 5e-09
1suo_A 476 Structure Of Mammalian Cytochrome P450 2b4 With Bou 5e-09
1po5_A 476 Structure Of Mammalian Cytochrome P450 2b4 Length = 5e-09
3tk3_A 476 Cytochrome P450 2b4 Mutant L437a In Complex With 4- 5e-09
1r9o_A 477 Crystal Structure Of P4502c9 With Flurbiprofen Boun 1e-08
1og2_A 475 Structure Of Human Cytochrome P450 Cyp2c9 Length = 2e-08
4gqs_A 477 Structure Of Human Microsomal Cytochrome P450 (cyp) 6e-08
2p85_A 476 Structure Of Human Lung Cytochrome P450 2a13 With I 1e-07
2pg5_A 476 Crystal Structure Of Human Microsomal P450 2a6 N297 3e-07
2pg7_A 476 Crystal Structure Of Human Microsomal P450 2a6 N297 3e-07
1z10_A 476 Crystal Structure Of Human Microsomal P450 2a6 With 3e-07
3ebs_A 476 Human Cytochrome P450 2a6 I208sI300FG301AS369G IN C 3e-07
2pg6_A 476 Crystal Structure Of Human Microsomal P450 2a6 L240 3e-07
2hi4_A 495 Crystal Structure Of Human Microsomal P450 1a2 In C 3e-06
3qz1_A 496 Crystal Structure Of Bovine Steroid Of 21-Hydroxyla 2e-05
2f9q_A 479 Crystal Structure Of Human Cytochrome P450 2d6 Leng 9e-05
3qm4_A 479 Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Compl 1e-04
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5 Length = 473 Back     alignment and structure 
Iteration: 1

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 25  KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
           KT     LPPGP   P IGN+ Q D  +      + S+ YGP+ ++ LG  P +V+   +
Sbjct: 4   KTSSKGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYE 63
Query: 85  MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNA-YWREIRKICVVHLFN 138
             +E L     +F  R ++   +KVS  GL +AF+  NA  W+E+R+  ++ L N
Sbjct: 64  AVKEALVDLGEEFAGRGSVPILEKVS-KGLGIAFS--NAKTWKEMRRFSLMTLRN 115
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome P450 2c8 Length = 476 Back     alignment and structure
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha- Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1) Length = 507 Back     alignment and structure
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4- Methylpyrazole Length = 476 Back     alignment and structure
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4- Cholorophenyl)imidazole Length = 478 Back     alignment and structure
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With Anti- Platelet Drug Clopidogrel Length = 479 Back     alignment and structure
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound 4-(4- Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 Length = 476 Back     alignment and structure
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With 4-(4-Chlorophenyl) Imidazole Length = 476 Back     alignment and structure
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound Length = 477 Back     alignment and structure
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9 Length = 475 Back     alignment and structure
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19 Length = 477 Back     alignment and structure
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole Bound In Two Alternate Conformations Length = 476 Back     alignment and structure
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q Length = 476 Back     alignment and structure
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V Length = 476 Back     alignment and structure
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With Coumarin Bound Length = 476 Back     alignment and structure
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX With Phenacetin Length = 476 Back     alignment and structure
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q Length = 476 Back     alignment and structure
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex With Alpha-Naphthoflavone Length = 495 Back     alignment and structure
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase (P450c21) Length = 496 Back     alignment and structure
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6 Length = 479 Back     alignment and structure
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex Length = 479 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query235
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 5e-43
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 7e-05
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 1e-40
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 6e-34
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 1e-05
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 3e-33
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 9e-31
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 7e-30
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 2e-29
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 1e-28
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 2e-28
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 1e-27
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 8e-27
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 4e-26
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 7e-26
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 1e-25
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 3e-23
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 6e-21
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 1e-18
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 9e-18
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 3e-17
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 1e-16
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 1e-14
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 7e-14
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 2e-12
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 4e-12
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 4e-06
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 4e-06
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 7e-04
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
 Score =  150 bits (381), Expect = 5e-43
 Identities = 20/155 (12%), Positives = 47/155 (30%), Gaps = 13/155 (8%)

Query: 25  KTIKSIALPPGPRGLPFIGNLHQF---DYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVS 81
           ++ +     P P    ++   H +          +  +  ++YGP+   +LG+V  + V 
Sbjct: 3   RSPRPFNEIPSPGDNGWLNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVI 62

Query: 82  SAKMAEEVLKTHDLQFCSRP-ALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSN 140
             +    + K+                   Y          +A W++ R      +    
Sbjct: 63  DPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPE 122

Query: 141 RVQSFRPIREDYFPSIGWVDNITGMIRRLERNFKE 175
             ++F P+ +               +  L R  K+
Sbjct: 123 ATKNFLPLLDAV---------SRDFVSVLHRRIKK 148
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query235
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 99.96
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 99.96
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.95
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.95
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.95
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.94
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.94
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.94
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.94
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 99.94
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.93
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.93
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.93
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.93
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.93
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.92
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.92
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 99.92
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.91
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 99.91
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.89
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.89
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.88
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.85
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.83
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.82
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.82
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.81
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.81
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.8
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.8
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.8
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 99.8
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.79
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.79
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.78
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.78
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.78
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.77
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.77
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.77
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.76
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.76
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.76
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.75
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.75
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.75
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.75
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.75
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.75
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.75
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.75
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.74
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.74
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.74
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.73
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.73
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.72
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.71
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.71
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.7
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.68
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.68
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.67
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.67
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.67
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.64
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.59
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.58
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.58
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.56
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.53
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.49
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.49
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.46
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.37
2yjn_B 381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 96.68
1s79_A103 Lupus LA protein; RRM, alpha/beta, RNA binding pro 82.01
2diu_A96 KIAA0430 protein; structural genomics, RRM domain, 81.1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
Probab=99.96  E-value=9.3e-28  Score=194.91  Aligned_cols=204  Identities=23%  Similarity=0.363  Sum_probs=151.8

Q ss_pred             ccCCCCCCCCCCccccccccCCCC-CChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhH
Q 026656           27 IKSIALPPGPRGLPFIGNLHQFDY-SNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLS  105 (235)
Q Consensus        27 ~~~~~~~pgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~  105 (235)
                      ++..+.||||+++|++||++.+.. +.++..+.+|+++|||++++++|+.++|+|+||+++++++.+++..|++++....
T Consensus         4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~   83 (494)
T 3swz_A            4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT   83 (494)
T ss_dssp             --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred             CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence            345678999999999999998742 3678999999999999999999999999999999999999998889998887655


Q ss_pred             HHHhhcCCcceeecCCCHHHHHHHHHHHHhhcch--hhhhhcccchh---------------------------------
Q 026656          106 QQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNS--NRVQSFRPIRE---------------------------------  150 (235)
Q Consensus       106 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~--~~l~~~~~~~~---------------------------------  150 (235)
                      .+.+...+.|++++++|++|+.+|+++ .+.|+.  ..+..+.+.+.                                 
T Consensus        84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~  162 (494)
T 3swz_A           84 LDIASNNRKGIAFADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVIS  162 (494)
T ss_dssp             HHHHTTTTCSSSSSCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHH
T ss_pred             HHHhccCCCCeEeCCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHH
Confidence            555544466777776799999999999 798873  33444443332                                 


Q ss_pred             -----------------------------------ccccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCC
Q 026656          151 -----------------------------------DYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKT  195 (235)
Q Consensus       151 -----------------------------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  195 (235)
                                                         +.+|+++++  +....++..+..+.+.++++++++++++..+ .+
T Consensus       163 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~--p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~  239 (494)
T 3swz_A          163 LICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIF--PNKTLEKLKSHVKIRNDLLNKILENYKEKFR-SD  239 (494)
T ss_dssp             HHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTS--CCSHHHHHHHHHHHHHHHHHHHHHHHTTTCC-TT
T ss_pred             HHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cc
Confidence                                               234555544  3344566777788888999999998877543 23


Q ss_pred             CcccHHHHHHHHhhhcC--------CCCCCCHHHHHHHHHHHhcccC
Q 026656          196 DQEDIVDVLLQIWKQRG--------SKVDITWDHIKAVLMVKFHNQY  234 (235)
Q Consensus       196 ~~~d~l~~ll~~~~~~~--------~~~~ls~~~i~~~~~~~~~AG~  234 (235)
                      ...|+++.|+++..+.+        .+..++++++.+++.++++||+
T Consensus       240 ~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~  286 (494)
T 3swz_A          240 SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGV  286 (494)
T ss_dssp             CCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcch
Confidence            46799999998754311        1235899999999999999995
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1 Back     alignment and structure
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 235
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 2e-28
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 4e-27
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 4e-25
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 8e-25
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 2e-22
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 7e-21
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 2e-12
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 2e-12
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 6e-09
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2c9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 2e-28
 Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 2/121 (1%)

Query: 32  LPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLK 91
           LPPGP  LP IGN+ Q    +       LSK YGP+ +L  G  PI+V+   +  +E L 
Sbjct: 4   LPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALI 63

Query: 92  THDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRED 151
               +F  R      ++ +              W+EIR+  ++ L N    +     R  
Sbjct: 64  DLGEEFSGRGIFPLAERANRG--FGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQ 121

Query: 152 Y 152
            
Sbjct: 122 E 122
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query235
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.95
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.94
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.92
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.91
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.91
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.9
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.81
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.72
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.69
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.68
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.65
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.64
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.61
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.59
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.52
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.34
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.32
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.3
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.11
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.09
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 98.84
d2f9da1114 Pre-mRNA branch site protein p14 {Human (Homo sapi 87.63
d1l3ka184 Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human 84.85
d1x0fa175 Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo s 84.19
d1hd0a_75 Heterogeneous nuclear ribonucleoprotein d0 {Human 84.05
d1l3ka279 Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human 82.36
d1uawa_77 Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]} 80.66
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=99.95  E-value=2.6e-27  Score=188.41  Aligned_cols=197  Identities=11%  Similarity=0.158  Sum_probs=149.8

Q ss_pred             CCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhh
Q 026656           31 ALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVS  110 (235)
Q Consensus        31 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~  110 (235)
                      +.+|||+++|++||++.+...+++..+.+++++|||||++++++.++|+++||+++++++.++...+..+........+.
T Consensus         1 r~iPGP~~~p~lG~l~~l~~~~~~~~~~~~~~kyG~if~~~~~~~~~vvl~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~   80 (453)
T d2ij2a1           1 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFA   80 (453)
T ss_dssp             CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHHHHHHHHH
T ss_pred             CCCccCCCcchhhCHHHhCCCCHHHHHHHHHHHhCCEEEEEeCCceEEEECCHHHHHHHHhcCCcccccccHhHHHHHhc
Confidence            35799999999999998866778999999999999999999999999999999999999977665555544333333333


Q ss_pred             cCCcceeec-CCCHHHHHHHHHHHHhhcchhhhhhcccchh---------------------------------------
Q 026656          111 YNGLDVAFA-PYNAYWREIRKICVVHLFNSNRVQSFRPIRE---------------------------------------  150 (235)
Q Consensus       111 ~~~~~~~~~-~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~---------------------------------------  150 (235)
                        |.|++.. .+|++|+++|+.+ .+.|+..+++.+.+.+.                                       
T Consensus        81 --g~~~~~~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~i~~~~~~li~~l~~~~~~~~idl~~~~~~~~~~~i~~~~fG  157 (453)
T d2ij2a1          81 --GDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFN  157 (453)
T ss_dssp             --TTSGGGSCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred             --CCcEEecCCChHHHHHHHHHH-HHHhhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCccchHHHHHHHhhhcchhcccc
Confidence              5565432 4699999999999 89999999998887665                                       


Q ss_pred             ------------------------ccccccc---cccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHH
Q 026656          151 ------------------------DYFPSIG---WVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDV  203 (235)
Q Consensus       151 ------------------------~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~  203 (235)
                                              ...+...   +........++..++.+.+.++++++++++++.   .+...|+++.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~~~~~d~l~~  234 (453)
T d2ij2a1         158 YRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKAS---GEQSDDLLTH  234 (453)
T ss_dssp             CCCCGGGCSSCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCSSHHHH
T ss_pred             cccchhhhccchHHHHhhhhccchhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhhccc---cccccchhhh
Confidence                                    0000000   001112334566778888999999999988773   4566899999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656          204 LLQIWKQRGSKVDITWDHIKAVLMVKFHNQY  234 (235)
Q Consensus       204 ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~  234 (235)
                      ++++.++.. +..++++++.+++.++++||+
T Consensus       235 ll~~~~~~~-~~~ls~~ei~~~~~~~l~ag~  264 (453)
T d2ij2a1         235 MLNGKDPET-GEPLDDENIRYQIITFLIAGH  264 (453)
T ss_dssp             HHHCCCTTT-CCCCCHHHHHHHHHHHHHHHH
T ss_pred             hhhhccccc-CcchhhhHHHhhhcccccccc
Confidence            998764422 346999999999999999995
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure