Citrus Sinensis ID: 026683

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-----
Protein Sequence
MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKAP
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHEHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
MSTLDATRAELALVVLYLNKAEARDKICRAIQYgskflsdgqpgtaqnvdkSTSLARKVFRLFKFVNdlhalispvpqgtplplvllgksknaLLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNERSLALVKSAMDIVVAVGLlqlapkkvtprvtgaFGFVTSLISCyqllpapvkakap
Flexible Loop (DISEMBL)
mstldatrAELALVVLYLNKAEARDKICRAIQYGskflsdgqpgtaqNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKelkdsdkhknEQYQAKLKKSNERSLALVKSAMDIVVAVGLlqlapkkvtpRVTGAFGFVTSLIScyqllpapvkakap
Low Complexity Region (SEG)
MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMkklekelkdsdkhkNEQYQAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKAP
Disordered region (IsUnstruct)
********AELALVVLYLNKAEARDKICRAIQYGSKFLS**************SLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELG***********************************LALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPA*******
Disordered Region (DISOPRED)
**********LALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGR**************************LKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPV*****
Disordered Region (DISEMBL)
MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDG**********STSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKAP
Disordered Region (DISPRO)
**TLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAP******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKAP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	235	2.2.26 [Sep-21-2011]
Q9LQ73	235	Peroxisomal membrane prot	yes	no	0.991	0.991	0.854	1e-117
O80845	236	Peroxisomal membrane prot	no	no	0.995	0.991	0.854	1e-117
Q84JW1	231	Peroxisomal membrane prot	no	no	0.982	1.0	0.821	1e-111
Q5VRJ8	233	Peroxisomal membrane prot	no	no	0.991	1.0	0.772	1e-106
Q10SM7	237	Peroxisomal membrane prot	no	no	0.995	0.987	0.789	1e-106
Q7XU74	222	Peroxisomal membrane prot	no	no	0.876	0.927	0.247	1e-09
Q01IH3	222	Peroxisomal membrane prot	N/A	no	0.876	0.927	0.247	1e-09
Q54H86	254	Peroxisomal membrane prot	yes	no	0.876	0.811	0.236	3e-07
Q10MN2	242	Peroxisomal membrane prot	no	no	0.574	0.557	0.314	2e-06
A2XFQ8	242	Peroxisomal membrane prot	N/A	no	0.574	0.557	0.314	2e-06

>sp|Q9LQ73|PX11C_ARATH Peroxisomal membrane protein 11C OS=Arabidopsis thaliana GN=PEX11C PE=1 SV=1

 Score =  421 bits (1081), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 199/233 (85%), Positives = 223/233 (95%)

Query: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
           MSTL+ TRAEL LVV+YLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDK+TSLARKVF
Sbjct: 1   MSTLETTRAELGLVVVYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKNTSLARKVF 60

Query: 61  RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           RLFKFVNDLHALISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGR+GIYK+KERAE
Sbjct: 61  RLFKFVNDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAE 120

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNER 180
           +LGRISLFCWMGSSVC++LVE+GELGRLS S+KKLEKE+ + DKH+NEQY+AK++KSNER
Sbjct: 121 ILGRISLFCWMGSSVCTSLVEVGELGRLSASIKKLEKEIGNKDKHQNEQYRAKVEKSNER 180

Query: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAK 233
           SLAL+K+ MD+VVA GLLQLAPKKVTPRVTGAFGF +SLISCYQLLP+  K+K
Sbjct: 181 SLALIKAGMDVVVAFGLLQLAPKKVTPRVTGAFGFASSLISCYQLLPSHPKSK 233

Involved in peroxisomal proliferation. Promotes peroxisomal duplication, aggregation or elongation without fission.
Arabidopsis thaliana (taxid: 3702)

>sp|O80845|PX11D_ARATH Peroxisomal membrane protein 11D OS=Arabidopsis thaliana GN=PEX11D PE=1 SV=2

 Score =  420 bits (1080), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/234 (85%), Positives = 221/234 (94%)

Query: 2   STLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFR 61
           +TLD +RAELALVV+YLNKAEARDK+CRAIQYGSKFLS GQPGTAQNVDKSTSLARKVFR
Sbjct: 3   TTLDVSRAELALVVMYLNKAEARDKLCRAIQYGSKFLSGGQPGTAQNVDKSTSLARKVFR 62

Query: 62  LFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAEL 121
           LFKFVNDLH LISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKERAEL
Sbjct: 63  LFKFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAEL 122

Query: 122 LGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNERS 181
           LGRISLFCWMGSSVC+TLVE+GE+GRLS+SMKK+EK LK+ +K+++E Y+AKLKKSNERS
Sbjct: 123 LGRISLFCWMGSSVCTTLVEVGEMGRLSSSMKKIEKGLKNGNKYQDEDYRAKLKKSNERS 182

Query: 182 LALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKAP 235
           LAL+KSAMDIVVA GLLQLAP K+TPRVTGAFGF+TS+ISCYQLLP   K K P
Sbjct: 183 LALIKSAMDIVVAAGLLQLAPTKITPRVTGAFGFITSIISCYQLLPTRPKIKTP 236

Involved in peroxisomal proliferation. Promotes peroxisomal duplication, aggregation or elongation without fission.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84JW1|PX11E_ARATH Peroxisomal membrane protein 11E OS=Arabidopsis thaliana GN=PEX11E PE=1 SV=1

 Score =  401 bits (1030), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/235 (82%), Positives = 215/235 (91%), Gaps = 4/235 (1%)

Query: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
           M+TLD TRAELAL+VLYLNKAEARDKICRAIQYGSKFLS GQPGTAQ VDK+TSLARKVF
Sbjct: 1   MTTLDLTRAELALIVLYLNKAEARDKICRAIQYGSKFLSGGQPGTAQTVDKNTSLARKVF 60

Query: 61  RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           RLFKFVND H LISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKER E
Sbjct: 61  RLFKFVNDFHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERTE 120

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNER 180
           LLGRISLFCW+GSSVC++ VE+GELGRLS+SMKK+EKELK  D    E Y+AKL+KSN+R
Sbjct: 121 LLGRISLFCWLGSSVCTSAVEIGELGRLSSSMKKMEKELKADD----ELYRAKLQKSNDR 176

Query: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKAP 235
           +LAL+KS+MDI+VA+GLLQLAPK ++PRVTGAFGF TSLISCYQLLP+  K K P
Sbjct: 177 TLALIKSSMDIIVAIGLLQLAPKTISPRVTGAFGFTTSLISCYQLLPSRPKLKTP 231

Involved in peroxisomal proliferation. Promotes peroxisomal duplication, aggregation or elongation without fission.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5VRJ8|PX115_ORYSJ Peroxisomal membrane protein 11-5 OS=Oryza sativa subsp. japonica GN=PEX11-5 PE=2 SV=1

 Score =  385 bits (988), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 180/233 (77%), Positives = 212/233 (90%)

Query: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
           MS+L++ RA+LAL++LYLNKAEARDKICRAIQYGSKF+S+GQPG AQNVDKSTSLARKVF
Sbjct: 1   MSSLESARADLALLILYLNKAEARDKICRAIQYGSKFVSNGQPGPAQNVDKSTSLARKVF 60

Query: 61  RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           RLFKFVNDLHALISP  +GTPLPL+LLGKSKNALLSTFLFLDQ+VW GR+GIYKNKERAE
Sbjct: 61  RLFKFVNDLHALISPPAKGTPLPLILLGKSKNALLSTFLFLDQIVWAGRTGIYKNKERAE 120

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNER 180
            L +I+ +C++GS+ C++++E+ EL RLS SMKKLEKELK  +  KNEQYQ KL+K NER
Sbjct: 121 FLSKIAFYCFLGSNTCTSIIEVAELQRLSKSMKKLEKELKHQELLKNEQYQMKLQKCNER 180

Query: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAK 233
            LAL+KS++DIVVA+GLLQLAPKKVTPRVTGAFGF +SLI+CYQLLPAP K+K
Sbjct: 181 RLALIKSSLDIVVAIGLLQLAPKKVTPRVTGAFGFASSLIACYQLLPAPAKSK 233

Involved in peroxisomal proliferation.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q10SM7|PX111_ORYSJ Peroxisomal membrane protein 11-1 OS=Oryza sativa subsp. japonica GN=PEX11-1 PE=2 SV=1

 Score =  384 bits (987), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 187/237 (78%), Positives = 216/237 (91%), Gaps = 3/237 (1%)

Query: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
           MSTLDATRAEL LVVLYLNKAEARDKICRAIQYGSKF+S+GQPGTAQ+VD+ST+LARKVF
Sbjct: 1   MSTLDATRAELGLVVLYLNKAEARDKICRAIQYGSKFISNGQPGTAQDVDRSTTLARKVF 60

Query: 61  RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           RL K+VNDLH LISP  +GTPL LVLLGKSKNALLSTFLFLDQ VWLGR+GIYKNKER +
Sbjct: 61  RLLKWVNDLHGLISPPAKGTPLTLVLLGKSKNALLSTFLFLDQFVWLGRTGIYKNKERTD 120

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNER 180
            + RISL+CWM SSVC+ LVELGEL RLS SM+KL +EL+D+DK++N+QY++K+K+S+ER
Sbjct: 121 RIVRISLYCWMASSVCAGLVELGELKRLSKSMRKLARELRDTDKYENDQYKSKMKQSDER 180

Query: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLP--AP-VKAKA 234
            LALVK+AMD+VVAVGLLQL+PKK+TPRVTGAFGFVTSLISCYQ LP  AP +K KA
Sbjct: 181 LLALVKAAMDVVVAVGLLQLSPKKITPRVTGAFGFVTSLISCYQQLPSRAPAIKVKA 237

Involved in peroxisomal proliferation.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XU74|PX114_ORYSJ Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. japonica GN=PEX11-4 PE=2 SV=2

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 16/222 (7%)

Query: 14  VVLYLNKAEARDKICRAIQYGSKFL-------SDGQPGTAQNVDKSTSLARKVFRLFKFV 66
           +V++L K +  DK+ +  QY SK         S G  G A+N + S  L+RK FR  +F+
Sbjct: 10  LVVFLAKRDGIDKLVKTFQYVSKLAHWAAESSSPGLAGRAKNWETSAGLSRKAFRTGRFL 69

Query: 67  NDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRIS 126
             L+ L     +  P     L    NA    + F D   WL R G+      A L  R+S
Sbjct: 70  TGLNGL-----RRAPGEFGALAVLANAGEMVYFFFDHFTWLSRVGVLD----AWLARRMS 120

Query: 127 LFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNERSLALVK 186
                G SV        +L  +   +++  K L++  K K+++ +        R +A   
Sbjct: 121 FISAFGESVGYVFFIAMDLIMIRRGLRQERKLLREGGKDKDKEVKKIRMDRVMRLMATAA 180

Query: 187 SAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPA 228
           +  D+V+ +  ++  P        G  G V++    Y+  P+
Sbjct: 181 NVADLVIGIADIEPNPFCNHAVTLGISGLVSAWAGWYRNWPS 222

Involved in peroxisomal proliferation.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q01IH3|PX114_ORYSI Peroxisomal membrane protein 11-4 OS=Oryza sativa subsp. indica GN=PEX11-4 PE=2 SV=1

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 16/222 (7%)

Query: 14  VVLYLNKAEARDKICRAIQYGSKFL-------SDGQPGTAQNVDKSTSLARKVFRLFKFV 66
           +V++L K +  DK+ +  QY SK         S G  G A+N + S  L+RK FR  +F+
Sbjct: 10  LVVFLAKRDGIDKLVKTFQYVSKLAHWAAESSSPGLAGRAKNWETSAGLSRKAFRTGRFL 69

Query: 67  NDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRIS 126
             L+ L     +  P     L    NA    + F D   WL R G+      A L  R+S
Sbjct: 70  TGLNGL-----RRAPGEFGALAVLANAGEMVYFFFDHFTWLSRVGVLD----AWLARRMS 120

Query: 127 LFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNERSLALVK 186
                G SV        +L  +   +++  K L++  K K+++ +        R +A   
Sbjct: 121 FISAFGESVGYVFFIAMDLIMIRRGLRQERKLLREGGKDKDKEVKKIRMDRVMRLMATAA 180

Query: 187 SAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPA 228
           +  D+V+ +  ++  P        G  G V++    Y+  P+
Sbjct: 181 NVADLVIGIADIEPNPFCNHAVTLGISGLVSAWAGWYRNWPS 222

Involved in peroxisomal proliferation.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q54H86|PEX11_DICDI Peroxisomal membrane protein 11 homolog OS=Dictyostelium discoideum GN=pex11 PE=3 SV=1

 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 31/237 (13%)

Query: 18  LNKAEARDKICRAIQYGSKFL-------SDGQPGTAQNVDKSTSLARKVFRLFKFVNDLH 70
           L +   +DKI + +QYG+K L       S       + ++ ++  ARKV+RL   + +  
Sbjct: 21  LAQTSGKDKIAKILQYGAKLLGYIFLKRSKHWVDVMKKLETTSGSARKVWRLGNTLAEQQ 80

Query: 71  ALISPVPQGTPLPLV-LLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFC 129
            +++      P   + +L   + + +  +   D ++ LG + I   K     LG  S   
Sbjct: 81  KILALFKVKNPFAFLNILALIRQSGMYFYWVFDHLI-LG-TNIGLCKFDTVKLGWYSSVS 138

Query: 130 WMGSSVCSTLVELGELG---------RLSTSMKKLEKELKDSDKH------KN----EQY 170
           W    +CS +++L  L          RL+ +  K+     + D H      +N    +Q+
Sbjct: 139 WFFGLLCSIIIDLNTLAIMLKKEKSLRLTITQNKINANNNNIDTHTITSEVENKAIIDQF 198

Query: 171 QAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLP 227
              +KK NE  L   K+  D+++A  LL++ P   +    G  G +++LI  YQ+ P
Sbjct: 199 NEVIKKKNEIYLNCAKNGSDLIIASTLLKIYP--FSQGTIGISGIISALIGAYQMWP 253

Involved in peroxisomal proliferation. Could participate in peroxisomal elongation or fission. May be involved in parceling of peroxisomes into regular quanta.

Dictyostelium discoideum (taxid: 44689)

>sp|Q10MN2|PX113_ORYSJ Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. japonica GN=PEX11-3 PE=2 SV=1

 Score = 52.8 bits (125), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 21/156 (13%)

Query: 47  QNVDKSTSLARKVFRLFKFVNDLHAL-ISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVV 105
           ++ + S  L+RK FRL KFV +++AL   P P   P  + LL      +   + FL+Q V
Sbjct: 68  KSFESSVGLSRKAFRLGKFVQNVNALRAHPHP---PPAVALLAYGGEGV---YYFLEQFV 121

Query: 106 WLGRSGIYKNKERAELLGRIS-LFCW--MGSSVCSTLVELGELGRLSTSMKKLEKE--LK 160
           WL ++G+      A LL R+  L  W  +   V S  ++L E+G+L +S+K   KE   +
Sbjct: 122 WLAKAGLLP----AHLLPRLQRLSAWAELLGYVGSITIKLEEIGKLESSVKMRLKEGCRE 177

Query: 161 DSDKHKNEQYQAKLKKSNERSLALVKSAMDIVVAVG 196
           +SD  +  + +  LK+     +++V+   D V+A+G
Sbjct: 178 ESDVVRTLRVKLLLKR-----MSVVQDVADAVMALG 208

Involved in peroxisomal proliferation.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2XFQ8|PX113_ORYSI Peroxisomal membrane protein 11-3 OS=Oryza sativa subsp. indica GN=PEX11-3 PE=2 SV=1

 Score = 52.8 bits (125), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 21/156 (13%)

Query: 47  QNVDKSTSLARKVFRLFKFVNDLHAL-ISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVV 105
           ++ + S  L+RK FRL KFV +++AL   P P   P  + LL      +   + FL+Q V
Sbjct: 68  KSFESSVGLSRKAFRLGKFVQNVNALRAHPHP---PPAVALLAYGGEGV---YYFLEQFV 121

Query: 106 WLGRSGIYKNKERAELLGRIS-LFCW--MGSSVCSTLVELGELGRLSTSMKKLEKE--LK 160
           WL ++G+      A LL R+  L  W  +   V S  ++L E+G+L +S+K   KE   +
Sbjct: 122 WLAKAGLLP----AHLLPRLQRLSAWAELLGYVGSITIKLEEIGKLESSVKMRLKEGCRE 177

Query: 161 DSDKHKNEQYQAKLKKSNERSLALVKSAMDIVVAVG 196
           +SD  +  + +  LK+     +++V+   D V+A+G
Sbjct: 178 ESDVVRTLRVKLLLKR-----MSVVQDVADAVMALG 208

Involved in peroxisomal proliferation.

Oryza sativa subsp. indica (taxid: 39946)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
224063967	235	predicted protein [Populus trichocarpa]	0.991	0.991	0.918	1e-121
224130140	235	predicted protein [Populus trichocarpa]	0.991	0.991	0.914	1e-121
255541462	235	peroxisomal biogenesis factor, putative	0.991	0.991	0.909	1e-121
225453744	235	PREDICTED: peroxisomal membrane protein	0.991	0.991	0.901	1e-120
297842942	235	peroxisomal biogenesis factor 11 family	0.991	0.991	0.871	1e-117
297824623	236	peroxisomal biogenesis factor 11 family	0.995	0.991	0.854	1e-115
18378887	235	peroxisomal membrane protein 11C [Arabid	0.991	0.991	0.854	1e-115
18406877	236	peroxisomal membrane protein 11D [Arabid	0.995	0.991	0.854	1e-115
388517419	235	unknown [Lotus japonicus]	0.995	0.995	0.854	1e-115
351723775	235	peroxisomal biogenesis factor 11 family	0.995	0.995	0.841	1e-114

>gi|224063967|ref|XP_002301325.1| predicted protein [Populus trichocarpa] gi|118484040|gb|ABK93906.1| unknown [Populus trichocarpa] gi|222843051|gb|EEE80598.1| predicted protein [Populus trichocarpa]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/233 (91%), Positives = 224/233 (96%)

Query: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
           MSTLDATRAELAL+VLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF
Sbjct: 1   MSTLDATRAELALIVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60

Query: 61  RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           RLFKFVNDLH LISPV QGTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKER +
Sbjct: 61  RLFKFVNDLHGLISPVSQGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERVD 120

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNER 180
           L+GRISLFCWMGSS+C+TLVE+GELGRLS SMKKLEKELKD +KH NEQY+AKLKKSNER
Sbjct: 121 LIGRISLFCWMGSSICTTLVEVGELGRLSVSMKKLEKELKDGEKHHNEQYRAKLKKSNER 180

Query: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAK 233
           SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFG VTSLISCYQLLP+P K K
Sbjct: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGVVTSLISCYQLLPSPQKPK 233

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130140|ref|XP_002320762.1| predicted protein [Populus trichocarpa] gi|118489542|gb|ABK96573.1| unknown [Populus trichocarpa x Populus deltoides] gi|222861535|gb|EEE99077.1| predicted protein [Populus trichocarpa]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/233 (91%), Positives = 225/233 (96%)

Query: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
           MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQ GTAQNVDKSTSLARKVF
Sbjct: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQAGTAQNVDKSTSLARKVF 60

Query: 61  RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           RLFKFVNDLH LISPVPQGTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKER E
Sbjct: 61  RLFKFVNDLHGLISPVPQGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERVE 120

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNER 180
           L+GRISLFCWMGSS+C+TLVE+GELGRLS SMKKLEKELK+ +K+ NEQY+AKLKKSNER
Sbjct: 121 LIGRISLFCWMGSSICTTLVEVGELGRLSASMKKLEKELKEGEKNHNEQYRAKLKKSNER 180

Query: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAK 233
           SLALVKSAMDIVVAVGLLQLAPKKVTPRVTG FGFV+SLISCYQLLP+P K+K
Sbjct: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGGFGFVSSLISCYQLLPSPQKSK 233

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541462|ref|XP_002511795.1| peroxisomal biogenesis factor, putative [Ricinus communis] gi|223548975|gb|EEF50464.1| peroxisomal biogenesis factor, putative [Ricinus communis]

 Score =  438 bits (1127), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/233 (90%), Positives = 227/233 (97%)

Query: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
           MSTLDATRAELAL+VLYLNKAEARDKICRAIQYGSKFLS+GQPGTAQNVDKSTSLARKVF
Sbjct: 1   MSTLDATRAELALLVLYLNKAEARDKICRAIQYGSKFLSNGQPGTAQNVDKSTSLARKVF 60

Query: 61  RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           RL KFVNDLHALISPV QGTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKERA+
Sbjct: 61  RLLKFVNDLHALISPVTQGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAD 120

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNER 180
           L+GRISL+CWMGSSVC+TLVE+GELGRLS S+KKLEKELK+SDKH+NEQY+AKL+KSNER
Sbjct: 121 LIGRISLYCWMGSSVCTTLVEIGELGRLSASLKKLEKELKNSDKHQNEQYRAKLQKSNER 180

Query: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAK 233
           SLALVK+AMDIVVAVGLLQLAPKKV PRVTGAFGFVTSLISCYQLLP+  KAK
Sbjct: 181 SLALVKAAMDIVVAVGLLQLAPKKVNPRVTGAFGFVTSLISCYQLLPSQPKAK 233

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453744|ref|XP_002273596.1| PREDICTED: peroxisomal membrane protein 11C isoform 2 [Vitis vinifera] gi|225453746|ref|XP_002273544.1| PREDICTED: peroxisomal membrane protein 11C isoform 1 [Vitis vinifera] gi|296089071|emb|CBI38774.3| unnamed protein product [Vitis vinifera]

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/233 (90%), Positives = 223/233 (95%)

Query: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
           MSTLDATRAEL LV+LYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF
Sbjct: 1   MSTLDATRAELGLVILYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60

Query: 61  RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           RLFKFVNDLHALISP PQGTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKERAE
Sbjct: 61  RLFKFVNDLHALISPAPQGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAE 120

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNER 180
            +GRISLFCWMGSS+C+TLVELGELGRLS SMKKLEKELK SDK++NEQY++KLKKSN R
Sbjct: 121 QIGRISLFCWMGSSICATLVELGELGRLSASMKKLEKELKGSDKYQNEQYRSKLKKSNAR 180

Query: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAK 233
           SLALVK+ MD VVAVGLLQLAPKKVTPRVTG FGFV+SLISCYQLLP+P K+K
Sbjct: 181 SLALVKAVMDTVVAVGLLQLAPKKVTPRVTGGFGFVSSLISCYQLLPSPPKSK 233

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842942|ref|XP_002889352.1| peroxisomal biogenesis factor 11 family protein [Arabidopsis lyrata subsp. lyrata] gi|297335194|gb|EFH65611.1| peroxisomal biogenesis factor 11 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  425 bits (1092), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/233 (87%), Positives = 223/233 (95%)

Query: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
           MSTL+ TRAEL LVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF
Sbjct: 1   MSTLETTRAELGLVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60

Query: 61  RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           RLFKFVNDLHALISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGR+GIYK+KERAE
Sbjct: 61  RLFKFVNDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAE 120

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNER 180
           LLGRISLFCWMGSSVC++LVE+GELGRLS S+KKLEKE+ + DKH+NEQY+AKL+KSNER
Sbjct: 121 LLGRISLFCWMGSSVCTSLVEVGELGRLSASIKKLEKEIGNKDKHQNEQYRAKLEKSNER 180

Query: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAK 233
           SLAL+K+ MD+VVA GLLQLAPKKVTPRVTGAFGF +SLISCYQLLP+  K+K
Sbjct: 181 SLALIKAGMDVVVAFGLLQLAPKKVTPRVTGAFGFASSLISCYQLLPSHPKSK 233

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824623|ref|XP_002880194.1| peroxisomal biogenesis factor 11 family protein [Arabidopsis lyrata subsp. lyrata] gi|297326033|gb|EFH56453.1| peroxisomal biogenesis factor 11 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/234 (85%), Positives = 222/234 (94%)

Query: 2   STLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFR 61
           +TLD +RAELALVV+YLNKAEARDK+CRAIQYGSKFLS GQPGTAQNVDKSTSLARKVFR
Sbjct: 3   TTLDVSRAELALVVMYLNKAEARDKLCRAIQYGSKFLSGGQPGTAQNVDKSTSLARKVFR 62

Query: 62  LFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAEL 121
           LFKFVNDLH LISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKERAEL
Sbjct: 63  LFKFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAEL 122

Query: 122 LGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNERS 181
           LGRISLFCWMGSSVC+TLVE+GE+GRLS+SMKK+EK LK  +K+++E+Y+AKLK+SNERS
Sbjct: 123 LGRISLFCWMGSSVCTTLVEVGEIGRLSSSMKKIEKGLKHGNKYQDEEYRAKLKQSNERS 182

Query: 182 LALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKAP 235
           LAL+KSAMDIVVA GLLQLAPKK+TPRVTGAFGF+TS+ISCYQLLP   K K P
Sbjct: 183 LALIKSAMDIVVAAGLLQLAPKKITPRVTGAFGFITSIISCYQLLPTRPKIKTP 236

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18378887|ref|NP_563636.1| peroxisomal membrane protein 11C [Arabidopsis thaliana] gi|75180079|sp|Q9LQ73.1|PX11C_ARATH RecName: Full=Peroxisomal membrane protein 11C; AltName: Full=Peroxin-11C; Short=AtPEX11c gi|8671852|gb|AAF78415.1|AC009273_21 Contains similarity to an unknown protein F4I18.28 gi|7486466 from Arabidopsis thaliana BAC F4I18 gb|AC004665. ESTs gb|F14309, gb|AI998750, gb|995247, gb|T14224 and gb|AI995247 come from this gene [Arabidopsis thaliana] gi|12083290|gb|AAG48804.1|AF332441_1 unknown protein [Arabidopsis thaliana] gi|17381255|gb|AAL36046.1| At1g01820/T1N6_18 [Arabidopsis thaliana] gi|20453367|gb|AAM19922.1| At1g01820/T1N6_18 [Arabidopsis thaliana] gi|21555588|gb|AAM63892.1| unknown [Arabidopsis thaliana] gi|57157092|dbj|BAD83578.1| unnamed protein product [Arabidopsis thaliana] gi|332189218|gb|AEE27339.1| peroxisomal membrane protein 11C [Arabidopsis thaliana]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/233 (85%), Positives = 223/233 (95%)

Query: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
           MSTL+ TRAEL LVV+YLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDK+TSLARKVF
Sbjct: 1   MSTLETTRAELGLVVVYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKNTSLARKVF 60

Query: 61  RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           RLFKFVNDLHALISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGR+GIYK+KERAE
Sbjct: 61  RLFKFVNDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAE 120

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNER 180
           +LGRISLFCWMGSSVC++LVE+GELGRLS S+KKLEKE+ + DKH+NEQY+AK++KSNER
Sbjct: 121 ILGRISLFCWMGSSVCTSLVEVGELGRLSASIKKLEKEIGNKDKHQNEQYRAKVEKSNER 180

Query: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAK 233
           SLAL+K+ MD+VVA GLLQLAPKKVTPRVTGAFGF +SLISCYQLLP+  K+K
Sbjct: 181 SLALIKAGMDVVVAFGLLQLAPKKVTPRVTGAFGFASSLISCYQLLPSHPKSK 233

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18406877|ref|NP_566055.1| peroxisomal membrane protein 11D [Arabidopsis thaliana] gi|30690116|ref|NP_850441.1| peroxisomal membrane protein 11D [Arabidopsis thaliana] gi|79324919|ref|NP_001031544.1| peroxisomal membrane protein 11D [Arabidopsis thaliana] gi|75099949|sp|O80845.2|PX11D_ARATH RecName: Full=Peroxisomal membrane protein 11D; AltName: Full=Peroxin-11D; Short=AtPEX11d gi|15450880|gb|AAK96711.1| Unknown protein [Arabidopsis thaliana] gi|20197204|gb|AAC28551.2| expressed protein [Arabidopsis thaliana] gi|21537163|gb|AAM61504.1| unknown [Arabidopsis thaliana] gi|330255500|gb|AEC10594.1| peroxisomal membrane protein 11D [Arabidopsis thaliana] gi|330255501|gb|AEC10595.1| peroxisomal membrane protein 11D [Arabidopsis thaliana] gi|330255502|gb|AEC10596.1| peroxisomal membrane protein 11D [Arabidopsis thaliana]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/234 (85%), Positives = 221/234 (94%)

Query: 2   STLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFR 61
           +TLD +RAELALVV+YLNKAEARDK+CRAIQYGSKFLS GQPGTAQNVDKSTSLARKVFR
Sbjct: 3   TTLDVSRAELALVVMYLNKAEARDKLCRAIQYGSKFLSGGQPGTAQNVDKSTSLARKVFR 62

Query: 62  LFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAEL 121
           LFKFVNDLH LISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKERAEL
Sbjct: 63  LFKFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAEL 122

Query: 122 LGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNERS 181
           LGRISLFCWMGSSVC+TLVE+GE+GRLS+SMKK+EK LK+ +K+++E Y+AKLKKSNERS
Sbjct: 123 LGRISLFCWMGSSVCTTLVEVGEMGRLSSSMKKIEKGLKNGNKYQDEDYRAKLKKSNERS 182

Query: 182 LALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKAP 235
           LAL+KSAMDIVVA GLLQLAP K+TPRVTGAFGF+TS+ISCYQLLP   K K P
Sbjct: 183 LALIKSAMDIVVAAGLLQLAPTKITPRVTGAFGFITSIISCYQLLPTRPKIKTP 236

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517419|gb|AFK46771.1| unknown [Lotus japonicus]

 Score =  418 bits (1075), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/234 (85%), Positives = 222/234 (94%)

Query: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
           MS LD TRAEL L+VLYLNKAEARDKICRAIQYGSKFLS+G+PGTAQ+VDKSTSLARKVF
Sbjct: 1   MSALDTTRAELGLLVLYLNKAEARDKICRAIQYGSKFLSNGEPGTAQDVDKSTSLARKVF 60

Query: 61  RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           RLFKFVNDLH LI+P PQGTPLPL+LLGKSKNALLSTFLFLDQ VWLGR+GI +NKER E
Sbjct: 61  RLFKFVNDLHGLITPTPQGTPLPLILLGKSKNALLSTFLFLDQFVWLGRTGIIENKERTE 120

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNER 180
           LLG ISLFCW+GSS C+TLVELGELGRLSTSMKKLEKELK+++K+ NEQY+AKL+KSNER
Sbjct: 121 LLGPISLFCWLGSSACTTLVELGELGRLSTSMKKLEKELKNTNKYDNEQYRAKLQKSNER 180

Query: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKA 234
           +LALVK+++DIVVAVGLLQLAPKKVTPRVTGAFGFV+SLISCYQLLPAPVK+K 
Sbjct: 181 TLALVKASIDIVVAVGLLQLAPKKVTPRVTGAFGFVSSLISCYQLLPAPVKSKT 234

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723775|ref|NP_001235755.1| peroxisomal biogenesis factor 11 family protein [Glycine max] gi|218117595|dbj|BAH03205.1| peroxisomal biogenesis factor 11 family protein [Glycine max] gi|255632590|gb|ACU16645.1| unknown [Glycine max]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 197/234 (84%), Positives = 221/234 (94%)

Query: 1   MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
           MSTLDATRAEL L+VLYL KAEARDKICRAIQYGSKFLS+G+PGTAQNVDK+TSLARKVF
Sbjct: 1   MSTLDATRAELGLLVLYLGKAEARDKICRAIQYGSKFLSNGEPGTAQNVDKTTSLARKVF 60

Query: 61  RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           RLFKFVNDLHALISP PQGTPLPL+LLGKSKNALLSTFLFLDQ VWLGR+GIY+NKER E
Sbjct: 61  RLFKFVNDLHALISPTPQGTPLPLILLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTE 120

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELKDSDKHKNEQYQAKLKKSNER 180
           L+GRISL+CW+GSSVC+TLVELGELGRLS+SMKKLEK+LK+ +K+ NEQY+AKL KSNER
Sbjct: 121 LIGRISLYCWLGSSVCTTLVELGELGRLSSSMKKLEKDLKNKNKYDNEQYRAKLNKSNER 180

Query: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKA 234
           +L+L+K+ +D VVAVGLLQLAPK VTPRVTGAFGFV+SLISCYQLLPAP K+K 
Sbjct: 181 TLSLIKAGIDTVVAVGLLQLAPKTVTPRVTGAFGFVSSLISCYQLLPAPAKSKT 234

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
TAIR|locus:2050694	236	PEX11D "AT2G45740" [Arabidopsi	0.995	0.991	0.824	5e-99
TAIR|locus:2198150	235	PEX11C "AT1G01820" [Arabidopsi	0.991	0.991	0.815	9.4e-98
TAIR|locus:2101012	231	PEX11E "peroxin 11E" [Arabidop	0.982	1.0	0.787	1.4e-94
TAIR|locus:2202430	248	PEX11A "AT1G47750" [Arabidopsi	0.863	0.818	0.248	3.6e-07
DICTYBASE|DDB_G0289623	254	pex11 "peroxisomal biogenesis	0.246	0.228	0.316	6.2e-06
FB|FBgn0034058	241	Pex11 "Peroxin 11" [Drosophila	0.889	0.867	0.266	8.2e-06
ASPGD|ASPL0000048457	235	pexK [Emericella nidulans (tax	0.863	0.863	0.259	7.4e-05

TAIR|locus:2050694 PEX11D "AT2G45740" [Arabidopsis thaliana (taxid:3702)]

 Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
 Identities = 193/234 (82%), Positives = 209/234 (89%)

Query:     2 STLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFR 61
             +TLD +RAELALVV+YLNKAEARDK+CRAIQYGSKFLS GQPGTAQNVDKSTSLARKVFR
Sbjct:     3 TTLDVSRAELALVVMYLNKAEARDKLCRAIQYGSKFLSGGQPGTAQNVDKSTSLARKVFR 62

Query:    62 LFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAEL 121
             LFKFVNDLH LISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKERAEL
Sbjct:    63 LFKFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAEL 122

Query:   122 LGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNERS 181
             LGRISLFCWMGSSVC+TLVE+GE+GRLS+SM              +E Y+AKLKKSNERS
Sbjct:   123 LGRISLFCWMGSSVCTTLVEVGEMGRLSSSMKKIEKGLKNGNKYQDEDYRAKLKKSNERS 182

Query:   182 LALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKAP 235
             LAL+KSAMDIVVA GLLQLAP K+TPRVTGAFGF+TS+ISCYQLLP   K K P
Sbjct:   183 LALIKSAMDIVVAAGLLQLAPTKITPRVTGAFGFITSIISCYQLLPTRPKIKTP 236

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0005779 "integral to peroxisomal membrane" evidence=IEA;IDA

GO:0016559 "peroxisome fission" evidence=IEA;ISS;IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0007031 "peroxisome organization" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IDA

TAIR|locus:2198150 PEX11C "AT1G01820" [Arabidopsis thaliana (taxid:3702)]

 Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
 Identities = 190/233 (81%), Positives = 211/233 (90%)

Query:     1 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
             MSTL+ TRAEL LVV+YLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDK+TSLARKVF
Sbjct:     1 MSTLETTRAELGLVVVYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKNTSLARKVF 60

Query:    61 RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
             RLFKFVNDLHALISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGR+GIYK+KERAE
Sbjct:    61 RLFKFVNDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAE 120

Query:   121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNER 180
             +LGRISLFCWMGSSVC++LVE+GELGRLS S+              NEQY+AK++KSNER
Sbjct:   121 ILGRISLFCWMGSSVCTSLVEVGELGRLSASIKKLEKEIGNKDKHQNEQYRAKVEKSNER 180

Query:   181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAK 233
             SLAL+K+ MD+VVA GLLQLAPKKVTPRVTGAFGF +SLISCYQLLP+  K+K
Sbjct:   181 SLALIKAGMDVVVAFGLLQLAPKKVTPRVTGAFGFASSLISCYQLLPSHPKSK 233

GO:0003674 "molecular_function" evidence=ND

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0005779 "integral to peroxisomal membrane" evidence=IEA;IDA

GO:0016559 "peroxisome fission" evidence=IEA;ISS;IMP

GO:0007031 "peroxisome organization" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005777 "peroxisome" evidence=IDA

GO:0042802 "identical protein binding" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

TAIR|locus:2101012 PEX11E "peroxin 11E" [Arabidopsis thaliana (taxid:3702)]

 Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
 Identities = 185/235 (78%), Positives = 207/235 (88%)

Query:     1 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60
             M+TLD TRAELAL+VLYLNKAEARDKICRAIQYGSKFLS GQPGTAQ VDK+TSLARKVF
Sbjct:     1 MTTLDLTRAELALIVLYLNKAEARDKICRAIQYGSKFLSGGQPGTAQTVDKNTSLARKVF 60

Query:    61 RLFKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
             RLFKFVND H LISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKER E
Sbjct:    61 RLFKFVNDFHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERTE 120

Query:   121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNER 180
             LLGRISLFCW+GSSVC++ VE+GELGRLS+SM              +E Y+AKL+KSN+R
Sbjct:   121 LLGRISLFCWLGSSVCTSAVEIGELGRLSSSMKKMEKELKAD----DELYRAKLQKSNDR 176

Query:   181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAKAP 235
             +LAL+KS+MDI+VA+GLLQLAPK ++PRVTGAFGF TSLISCYQLLP+  K K P
Sbjct:   177 TLALIKSSMDIIVAIGLLQLAPKTISPRVTGAFGFTTSLISCYQLLPSRPKLKTP 231

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0005779 "integral to peroxisomal membrane" evidence=IEA;IDA

GO:0016559 "peroxisome fission" evidence=IEA;ISS;IMP

GO:0007031 "peroxisome organization" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005777 "peroxisome" evidence=IDA

GO:0042802 "identical protein binding" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0009062 "fatty acid catabolic process" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

TAIR|locus:2202430 PEX11A "AT1G47750" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 56/225 (24%), Positives = 104/225 (46%)

Query:    17 YLNKAEARDKICRAIQYGSKFL--SDGQPGTA------QNVDKSTSLARKVFRLFKFVND 68
             YL+K +  DK+ +  +Y +K +  S   P T       ++ + S  ++RK FRL KFV D
Sbjct:    24 YLSKRDGVDKLLKISRYATKIILASSLIPETRSIIPRLKSFESSVGVSRKAFRLGKFVQD 83

Query:    69 LHALISPV-PQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISL 127
             ++AL S        L L+++      L   + F++Q +WL +SG+   K  ++ L +IS 
Sbjct:    84 INALRSSRWDSNHELVLLIIAYGGEGL---YYFVEQFIWLTKSGLIDAKH-SKWLQKISA 139

Query:   128 FCWMGSSVCSTLVELGELGRLST--SMXXXXXXXXXXXXXXNEQYQAKLKKSNERSLALV 185
             +  +   V S  +++ +L +L+   S                +    K+K   E+    V
Sbjct:   140 WAELVGYVGSVSIKIRDLRKLNDEESCVASTIEISVSRGLACDGEDEKMKMIKEKKTLKV 199

Query:   186 KSAMDIVVAVGLLQLAP----KKV--TPRVTGAFGFVTSLISCYQ 224
              S +  + A GL+ +A     K V   P V  + G  ++++S ++
Sbjct:   200 LSILQDL-ADGLMTIADIRDGKGVLSAPNVISSAGLFSAIVSTHK 243

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0005779 "integral to peroxisomal membrane" evidence=IEA;IDA

GO:0016559 "peroxisome fission" evidence=IEA;ISS;IMP

GO:0007031 "peroxisome organization" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005777 "peroxisome" evidence=IDA

GO:0042802 "identical protein binding" evidence=IDA

DICTYBASE|DDB_G0289623 pex11 "peroxisomal biogenesis factor 11" [Dictyostelium discoideum (taxid:44689)]

 Score = 87 (35.7 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
 Identities = 19/60 (31%), Positives = 33/60 (55%)

Query:   168 EQYQAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLP 227
             +Q+   +KK NE  L   K+  D+++A  LL++ P   +    G  G +++LI  YQ+ P
Sbjct:   196 DQFNEVIKKKNEIYLNCAKNGSDLIIASTLLKIYP--FSQGTIGISGIISALIGAYQMWP 253

GO:0016559 "peroxisome fission" evidence=IEA

GO:0005779 "integral to peroxisomal membrane" evidence=IEA;ISS

GO:0003674 "molecular_function" evidence=ND

GO:0007165 "signal transduction" evidence=ISS

GO:0007031 "peroxisome organization" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

FB|FBgn0034058 Pex11 "Peroxin 11" [Drosophila melanogaster (taxid:7227)]

 Score = 123 (48.4 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 62/233 (26%), Positives = 93/233 (39%)

Query:    19 NKAEARDKICRAIQYGSKFLSDG------QPGTAQN---VDKSTSLARKVFRLFKFVNDL 69
             N+A  RDKI R IQY S+ + D        P    N   V+   S  RK+ R  K V+  
Sbjct:     9 NQAGGRDKIARLIQYASRAMWDSLESANSNPALVDNFKTVEYILSTFRKLLRFGKCVDVF 68

Query:    70 HALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYK-NKER-AELLGRISL 127
             +  +  +        V L  SK +  S FLF D  +WL R+G+   N +R + +  +  L
Sbjct:    69 YGALKTIHHPDLNIRVTLTLSKLSQ-SLFLFADHFLWLARTGLTAVNAKRWSNIANKYWL 127

Query:   128 FCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNERSLALVKS 187
             F  +  ++C    E+  +  L  S               N       K+   +S  L++ 
Sbjct:   128 FSII-MNLCRDFYEILRVLDLHRSGSKSGISRCRIPASINSPED--FKRLALQSYVLMQG 184

Query:   188 AMDIVVA---------VGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVK 231
               DIVV          + L  L    +TPR  G  G ++SL   + LL    K
Sbjct:   185 HKDIVVDTVKNACDFFIPLTALGYTSLTPRTIGLLGAISSLAGLWALLEPRAK 237

GO:0007031 "peroxisome organization" evidence=ISS;IMP

GO:0016559 "peroxisome fission" evidence=IEA

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

ASPGD|ASPL0000048457 pexK [Emericella nidulans (taxid:162425)]

 Score = 115 (45.5 bits), Expect = 7.4e-05, P = 7.4e-05
 Identities = 59/227 (25%), Positives = 88/227 (38%)

Query:    11 LALVVLYLNKAEARDKICRAIQYGSKFLS-----DGQPGTA----QNVDKSTSLARKVFR 61
             LA  + ++     RDK+ R +QY S+F +       QP TA      V K     RK+ R
Sbjct:    12 LAHYLRFVATTVGRDKLLRTLQYFSRFYAWYLYRTNQPQTAIAPYNAVKKQFGTTRKILR 71

Query:    62 LFKFVNDLHALISPVPQGTPLPLVL--LGKSKNALLSTFLFLDQVVWLGRSGIYKNKERA 119
             + KF+  L A         P+  VL  L   +    + +L LD V  +   G ++     
Sbjct:    72 IGKFIEHLKAAALAADNKGPIDPVLRYLAIGRQLGYAGYLSLDTVTVVDVIG-FRKLASV 130

Query:   120 ELLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQAKLKKSNE 179
             + L   +   W     CS L  +  L RLS                       KL+K  E
Sbjct:   131 KRLQDSAYRAWFSGLACSVLAGVYTLWRLSQKQKTLDLKEGEGVVEAK-----KLEK--E 183

Query:   180 RSLA---LVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCY 223
             RS A   L+    D+ V V  + LA   +   + G  G ++SLI  +
Sbjct:   184 RSAARIQLISDLCDLTVPVSAIGLA--NLDDGLVGIAGTISSLIGVW 228


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      235       221   0.00095  112 3  11 22  0.36    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  578 (61 KB)
  Total size of DFA:  142 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.68u 0.10s 15.78t   Elapsed:  00:00:01
  Total cpu time:  15.68u 0.10s 15.78t   Elapsed:  00:00:01
  Start:  Sat May 11 01:44:49 2013   End:  Sat May 11 01:44:50 2013

GO:0006631 "fatty acid metabolic process" evidence=IMP

GO:0016559 "peroxisome fission" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0005778 "peroxisomal membrane" evidence=IEA;ISO

GO:0019395 "fatty acid oxidation" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q10SM7	PX111_ORYSJ	No assigned EC number	0.7890	0.9957	0.9873	no	no
Q5VRJ8	PX115_ORYSJ	No assigned EC number	0.7725	0.9914	1.0	no	no
Q84JW1	PX11E_ARATH	No assigned EC number	0.8212	0.9829	1.0	no	no
O80845	PX11D_ARATH	No assigned EC number	0.8547	0.9957	0.9915	no	no
Q9LQ73	PX11C_ARATH	No assigned EC number	0.8540	0.9914	0.9914	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	235
pfam05648	225	pfam05648, PEX11, Peroxisomal biogenesis factor 11	6e-52

>gnl|CDD|218675 pfam05648, PEX11, Peroxisomal biogenesis factor 11 (PEX11)

 Score =  167 bits (425), Expect = 6e-52
 Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 15/228 (6%)

Query: 11  LALVVLYLNKAEARDKICRAIQYGSKFL---------SDGQPGTAQNVDKSTSLARKVFR 61
           L  +V +L+    RDK+ R +QY S+ L         S       +N++   SL+RK+ R
Sbjct: 1   LDHLVRFLDSTVGRDKLLRTLQYASRLLAWYLYRKGSSPELIARLKNLESQFSLSRKLLR 60

Query: 62  LFKFVNDLHALISPVPQGTPLPLV-LLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAE 120
           L KF+  L A         P P++ LL   +N   + +L  D ++WL + G+ K K  A+
Sbjct: 61  LGKFLEHLQAAAKYYDNKLPDPVLRLLAVLRNLGYALYLPFDHILWLAKIGLLKVKN-AK 119

Query: 121 LLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKEL--KDSDKHKNEQYQAKLKKSN 178
              RIS   W+   + S + +L EL +L    KKL+KE   +     + +  +  LKK  
Sbjct: 120 RWSRISSRFWLFGLLLSLVRDLRELRQLQEKEKKLKKEKDSEGESTSERKLLKKILKKRP 179

Query: 179 ERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLL 226
              L LVK+  D+ +A+  L +   +    + G  G ++SLI  YQL 
Sbjct: 180 AALLDLVKNLCDLFIALNSLGIL--RFNDGLVGLAGTISSLIGIYQLW 225

This family consists of several peroxisomal biogenesis factor 11 (PEX11) proteins from several eukaryotic species. The PEX11 peroxisomal membrane proteins promote peroxisome division in multiple eukaryotes. Length = 225

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	235
PF05648	223	PEX11: Peroxisomal biogenesis factor 11 (PEX11)	100.0
KOG4186	233	consensus Peroxisomal biogenesis protein (peroxin)	100.0

>PF05648 PEX11: Peroxisomal biogenesis factor 11 (PEX11)

Probab=100.00  E-value=5.8e-46  Score=310.02  Aligned_cols=213  Identities=33%  Similarity=0.476  Sum_probs=181.8

Q ss_pred             HHHHHHHhcccchHHHHHHHHHHHHHHhccC------Cc---chHHhHHHhhhHHHHHHHhhhcHHHHHHhhcCCCCCCC
Q 026683           11 LALVVLYLNKAEARDKICRAIQYGSKFLSDG------QP---GTAQNVDKSTSLARKVFRLFKFVNDLHALISPVPQGTP   81 (235)
Q Consensus        11 l~~~~~~l~t~~GRDK~~r~iQY~~kll~~~------~~---~~~~~l~~~ls~aRk~~Rl~k~l~~~~~~~~~~~~~~~   81 (235)
                      ++++++|+++++||||++|++||+++++++.      .+   ..++++++++|++||+||+|+++++++.+.+....+++
T Consensus         1 l~~~~~~l~~~~GrDK~~r~~qy~~~~~~~~~~~~~~~~~~~~~~~~l~~~ls~aRk~~Rl~k~l~~l~~~~~~~~~~~~   80 (223)
T PF05648_consen    1 LDHFVRFLSSTDGRDKLLRLLQYSSKFLAWYLARRGPSKELSKRLKALSSQLSDARKLFRLGKFLPMLQAARKYIKKKPS   80 (223)
T ss_pred             CHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHhhhHHHHHHHHccHHHHHHHHHhhccCCc
Confidence            5899999999999999999999999999872      11   24689999999999999999999999999988763334


Q ss_pred             hhHH-HHHhhhhhHhHHHHHHHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 026683           82 LPLV-LLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLEKELK  160 (235)
Q Consensus        82 ~~~~-~l~~~~~~~~~~Y~~~D~v~wl~~~g~~~~~~~~~~~~~~s~~fW~~~l~~~~~~~~~~l~~l~~~~~~l~~~~~  160 (235)
                      +.+. .+++++++++++|+++||++|++++|+++.+ ..+++.++|++||++++++++++++++++++..++++..++.+
T Consensus        81 d~~~~~l~~l~~~~~~~y~~~D~~~wl~~~gl~~~~-~~~~~~~~s~~~W~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~  159 (223)
T PF05648_consen   81 DQVLRILEILSNLFMFLYYLLDNLVWLSKLGLLPNK-SKKKWSRWSNRFWFASLVLSLVRDLRELRRLRQKERSLKKQLK  159 (223)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            5655 4789999999999999999999999999986 3459999999999999999999999999988877766654332


Q ss_pred             hcccccHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcccCCCCCCCccchhhhhHHHHHHHHHHhC
Q 026683          161 DSDKHKNEQYQAKLKKSNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLL  226 (235)
Q Consensus       161 ~~~~~~~e~~~~~~~~~~~~~l~lv~~~~D~~i~~~~l~~~~~~~~~~~vg~~G~iSsli~~y~~w  226 (235)
                      ++++.+++++.+..+++.+..+++++|+||+++|++++|+.  .++|++||++|++||++|+|++|
T Consensus       160 ~~~~~~~~~l~~~~~~~~~~~l~lv~~~~D~~~~~~~l~~~--~~~~~~vg~~G~iSs~i~~~~~W  223 (223)
T PF05648_consen  160 EKDENEEEKLKKLRKERRALLLDLVKNLCDLIIAVHWLGWL--KVSDGVVGLLGLISSLIGLYQLW  223 (223)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCe--eCChhhHHHHHHHHHHHHHHHhC
Confidence            23322233344566677888999999999999999999885  59999999999999999999999

>KOG4186 consensus Peroxisomal biogenesis protein (peroxin) [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=6.6e-43  Score=287.09  Aligned_cols=219  Identities=36%  Similarity=0.486  Sum_probs=177.1

Q ss_pred             HHHHHHHhcccchHHHHHHHHHHHHHHhcc----CCcch---HHhHHHhhhHHHHHHHhhhcHHHHHHhhcCC--CCCCC
Q 026683           11 LALVVLYLNKAEARDKICRAIQYGSKFLSD----GQPGT---AQNVDKSTSLARKVFRLFKFVNDLHALISPV--PQGTP   81 (235)
Q Consensus        11 l~~~~~~l~t~~GRDK~~r~iQY~~kll~~----~~~~~---~~~l~~~ls~aRk~~Rl~k~l~~~~~~~~~~--~~~~~   81 (235)
                      ++++++|+++++||||++|.+||+|+++++    ++|+.   ++++++++|.+||+||+||++++++.+.++.  +.+++
T Consensus         1 ~d~lv~~ln~~~gRDKl~RalQY~akll~~~l~~~~p~~a~~~~kles~~S~~RK~~Rl~k~l~~~~~~~~~~~~~~~~~   80 (233)
T KOG4186|consen    1 LDHLVRFLNSAAGRDKLCRALQYVAKLLSWHLEAGSPELAKRLKKLESQLSLARKVLRLGKDLNMFQAALQYGLVPLGTD   80 (233)
T ss_pred             CcHHHHHhhhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcccCCCCCc
Confidence            478999999999999999999999999999    67764   5688899999999999999999999999983  33332


Q ss_pred             hhHHHHHhhhhhHhHHHHHHHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH---HH
Q 026683           82 LPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMKKLE---KE  158 (235)
Q Consensus        82 ~~~~~l~~~~~~~~~~Y~~~D~v~wl~~~g~~~~~~~~~~~~~~s~~fW~~~l~~~~~~~~~~l~~l~~~~~~l~---~~  158 (235)
                      ..+..+++++|+.+.+|+++|||.|++++|+++.+  ..+|...+...|.+++.++++++++.+..+.+...+..   ++
T Consensus        81 ~~lr~~~~l~n~~~~~Y~~~D~v~Wl~~~gi~~~~--~~~~~~~~~~~w~~sl~l~~~r~~~~~~~~~r~~~~~k~~~~~  158 (233)
T KOG4186|consen   81 NVLRLLGVLKNLAFALYLFLDHVLWLARTGIIPVK--SERWKISRISLWLLSLGLNLCRDMYEVFELQRLSSSIKKKTKS  158 (233)
T ss_pred             chhhHHHHHhHHHHHHHHHHHHHHHHHHhCCcccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccC
Confidence            33445799999999999999999999999999987  38999999999999999999999988655443222211   11


Q ss_pred             hhhcccccHHHHHHHHHH--hhHHHHHHHHHHHHHHHHhhcccCCCCCCCccchhhhhHHHHHHHHHHhCCCCccCC
Q 026683          159 LKDSDKHKNEQYQAKLKK--SNERSLALVKSAMDIVVAVGLLQLAPKKVTPRVTGAFGFVTSLISCYQLLPAPVKAK  233 (235)
Q Consensus       159 ~~~~~~~~~e~~~~~~~~--~~~~~l~lv~~~~D~~i~~~~l~~~~~~~~~~~vg~~G~iSsli~~y~~w~~~~k~~  233 (235)
                      +.++++.+.+..++....  ++...++...+.||.++|...+++  ++++|++||++|++||++|+|++|++++|+|
T Consensus       159 ~~~~~e~~~~~l~~~~~~~~~~~l~l~~~~~~~~~~ipl~~L~~--~k~~p~~vGl~G~vSSilg~y~~~~~~~~~k  233 (233)
T KOG4186|consen  159 ISSGDEEDREKLQAQQLDQNHRLLLLSADFNAADSALPLGQLGP--GKLNPRQVGLFGLVSSILGMYQLWPPRPKLK  233 (233)
T ss_pred             CCCccHHHHHHHHHHHHHccchHHHHHHHHHHHHHhhhhhccCc--CcCChhHhhHHHHHHHHHHHHHHccccccCC
Confidence            111112222223332222  455688999999999999999987  5699999999999999999999999999876

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00