Citrus Sinensis ID: 026783

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230---
MLASFSTIALFVGFLPMGTCLIITSCISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML
ccccccccEEEEEEccccEEEHHHHHHHcccccccEEEcccccccccccHHHHHHHHcccccccEEEEcHHHHHHHHHHccccccccccccccccccEEEEEcccccEEEccEEEEEEEEEccccccEEEEEEccEEEEcccccccHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHcccccEEEEEccEEEEEEc
cHHHHHHHHHHHHHcccccHHHHHHHHHcccccEcEEEEEcccHHHHcccHcHHHHHHHccccccEEccHHHHHHHHHHcccEEEcccccccccccccEEEEcccccEEEccEEEEEEEccccccccEEEEEEccEEEcccHccccHHHHHHHHcccEEEEEcccccccccccccHHHHHHHHHHHccccEEEEcccccccHHHHHHHccccccccccccEEccccEEEEEEc
MLASFSTIALFVGFLPMGTCLIITSCISARIRTIDAVIITHshadaigglddlrdwtnnvQRHIPIYVAMRDFEVMKKTHYYLvdtsgiipgaavselqfniideepftvqdlkitplpvwhgagyrslgfrfgnicyisdvseipeetypflqdCEILIMdalrpdrsssthfglprALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETegldvqlsydglrvpvml
MLASFSTIALFVGFLPMGTCLIITSCISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSssthfglpraleevrkiqPKRTLFIGMMHLMDHEKVNEELLKLMETegldvqlsydglrvpvml
MLASFSTIALFVGFLPMGTCLIITSCISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML
****FSTIALFVGFLPMGTCLIITSCISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALR********FGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLR*****
MLASFSTIALFVGFLPMGTCLIITSCISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML
MLASFSTIALFVGFLPMGTCLIITSCISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML
MLASFSTIALFVGFLPMGTCLIITSCISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLASFSTIALFVGFLPMGTCLIITSCISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query233 2.2.26 [Sep-21-2011]
O74545301 Putative hydrolase C777.0 yes no 0.836 0.647 0.334 3e-28
Q7MUY1 492 Octanoyltransferase OS=Po yes no 0.806 0.382 0.281 5e-16
P16692252 Protein PhnP OS=Escherich N/A no 0.733 0.678 0.259 0.0005
>sp|O74545|YCV6_SCHPO Putative hydrolase C777.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC777.06c PE=4 SV=1 Back     alignment and function desciption
 Score =  125 bits (314), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 121/215 (56%), Gaps = 20/215 (9%)

Query: 27  ISARIRTIDAVIITHSHADAIGGLDDLRDWT-NNVQRHIPIYVAMRDFEVMKKTHYYLVD 85
           +  +IR +DAVI+TH HADAI G+DDLR+WT   +Q  + IY+  R ++V++++  Y+V+
Sbjct: 85  VEHKIRYLDAVILTHDHADAINGMDDLREWTLGFLQPSVKIYLTERTYKVIERSFPYMVN 144

Query: 86  TSGIIPGAAVSELQFNIID-EEPFTVQDLKI--TPLPVWHGA---------GYRSLGFRF 133
                 G +V    F++   ++PF + D+ I  TPLPV HG           Y  +GFR 
Sbjct: 145 AKNATGGGSVPTFDFHVFSPDKPFKLDDIDISVTPLPVHHGVYFIEGKESQTYFCMGFRV 204

Query: 134 GNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQ--PKRT 191
           G++ YISD + +P  T   ++   ++++DAL+ +   S HF   +A E +  ++  P R 
Sbjct: 205 GDMSYISDCNYVPPTTKKLMEGSNVVVVDALKHEPYPS-HFSFKQAEEFIASLEHVPSRV 263

Query: 192 LFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDG 226
           L+ G  H ++H +  +EL  L     +  + +YDG
Sbjct: 264 LYTGFSHKVEHNETVKELSVLK----VPTEPAYDG 294

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|Q7MUY1|LIPB_PORGI Octanoyltransferase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=lipB PE=3 SV=1 Back     alignment and function description
>sp|P16692|PHNP_ECOLI Protein PhnP OS=Escherichia coli (strain K12) GN=phnP PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query233
255572929 346 catalytic, putative [Ricinus communis] g 0.871 0.586 0.906 1e-104
449458165 357 PREDICTED: putative hydrolase C777.06c-l 0.871 0.568 0.876 1e-103
225442301 350 PREDICTED: putative hydrolase C777.06c [ 0.871 0.58 0.886 1e-102
224135033314 predicted protein [Populus trichocarpa] 0.871 0.646 0.866 1e-100
363814330 342 uncharacterized protein LOC100786919 [Gl 0.871 0.593 0.852 2e-99
218202019 365 hypothetical protein OsI_31065 [Oryza sa 0.927 0.591 0.798 2e-99
297829934 359 metallo-beta-lactamase family protein [A 0.871 0.565 0.838 2e-99
42564134 361 metallo-beta-lactamase family protein [A 0.871 0.562 0.833 8e-99
357513653 341 Hydrolase-like protein [Medicago truncat 0.871 0.595 0.857 2e-98
9294602309 hydrolase-like protein [Arabidopsis thal 0.871 0.656 0.833 5e-98
>gi|255572929|ref|XP_002527395.1| catalytic, putative [Ricinus communis] gi|223533205|gb|EEF34961.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/203 (90%), Positives = 191/203 (94%)

Query: 31  IRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGII 90
           +RTIDAVIITHSHADAIGGLDDLRDWTNNVQ HIPIYVA RDFEVMKKTHYYLVDTS II
Sbjct: 144 LRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIYVAERDFEVMKKTHYYLVDTSVII 203

Query: 91  PGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETY 150
           PGAAVSELQFNI+ EEPF V DLKITPLPVWHG GYRSLGFRFG ICYISDVS+IPEETY
Sbjct: 204 PGAAVSELQFNIMHEEPFIVCDLKITPLPVWHGPGYRSLGFRFGKICYISDVSDIPEETY 263

Query: 151 PFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELL 210
           P L+DCEILI+DALRPDRSSSTHFGLPRAL+EVRKIQPKRTLF GMMHLMDHEKVNE LL
Sbjct: 264 PLLKDCEILILDALRPDRSSSTHFGLPRALDEVRKIQPKRTLFTGMMHLMDHEKVNEYLL 323

Query: 211 KLMETEGLDVQLSYDGLRVPVML 233
           KLME+EGLDVQLSYDGLRVPV L
Sbjct: 324 KLMESEGLDVQLSYDGLRVPVTL 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449458165|ref|XP_004146818.1| PREDICTED: putative hydrolase C777.06c-like [Cucumis sativus] gi|449476657|ref|XP_004154798.1| PREDICTED: putative hydrolase C777.06c-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225442301|ref|XP_002280465.1| PREDICTED: putative hydrolase C777.06c [Vitis vinifera] gi|297743093|emb|CBI35960.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224135033|ref|XP_002327550.1| predicted protein [Populus trichocarpa] gi|222836104|gb|EEE74525.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|363814330|ref|NP_001242806.1| uncharacterized protein LOC100786919 [Glycine max] gi|255644437|gb|ACU22723.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|218202019|gb|EEC84446.1| hypothetical protein OsI_31065 [Oryza sativa Indica Group] gi|222641433|gb|EEE69565.1| hypothetical protein OsJ_29077 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|297829934|ref|XP_002882849.1| metallo-beta-lactamase family protein [Arabidopsis lyrata subsp. lyrata] gi|297328689|gb|EFH59108.1| metallo-beta-lactamase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42564134|ref|NP_187996.2| metallo-beta-lactamase family protein [Arabidopsis thaliana] gi|62318851|dbj|BAD93913.1| hydrolase like protein [Arabidopsis thaliana] gi|63003856|gb|AAY25457.1| At3g13800 [Arabidopsis thaliana] gi|90093300|gb|ABD85163.1| At3g13800 [Arabidopsis thaliana] gi|110739543|dbj|BAF01680.1| hydrolase like protein [Arabidopsis thaliana] gi|332641895|gb|AEE75416.1| metallo-beta-lactamase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357513653|ref|XP_003627115.1| Hydrolase-like protein [Medicago truncatula] gi|355521137|gb|AET01591.1| Hydrolase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|9294602|dbj|BAB02903.1| hydrolase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query233
TAIR|locus:2087974361 AT3G13800 "AT3G13800" [Arabido 0.871 0.562 0.833 5e-92
POMBASE|SPCC777.06c301 SPCC777.06c "hydrolase (predic 0.836 0.647 0.342 1.2e-28
TAIR|locus:2009827324 AT1G30300 "AT1G30300" [Arabido 0.751 0.540 0.382 4e-26
TAIR|locus:2140695303 AT4G03610 [Arabidopsis thalian 0.729 0.561 0.377 6.1e-23
TIGR_CMR|GSU_2465251 GSU_2465 "metallo-beta-lactama 0.785 0.729 0.331 2.7e-20
UNIPROTKB|Q5LPV6266 SPO2743 "Uncharacterized prote 0.716 0.627 0.335 4.1e-17
TIGR_CMR|SPO_2743266 SPO_2743 "conserved hypothetic 0.716 0.627 0.335 4.1e-17
TIGR_CMR|APH_1062263 APH_1062 "metallo-beta-lactama 0.819 0.726 0.277 4.7e-16
TIGR_CMR|ECH_0985263 ECH_0985 "metallo-beta-lactama 0.836 0.741 0.257 4.4e-13
TIGR_CMR|NSE_0580264 NSE_0580 "metallo-beta-lactama 0.828 0.731 0.239 1.4e-06
TAIR|locus:2087974 AT3G13800 "AT3G13800" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
 Identities = 170/204 (83%), Positives = 188/204 (92%)

Query:    31 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGII 90
             +RT+DAV+ITHSHADAIGGLDDLRDWTNNVQ HIPIY A+RD EVMKKTHYYLVDTS II
Sbjct:   158 LRTLDAVVITHSHADAIGGLDDLRDWTNNVQPHIPIYTAIRDLEVMKKTHYYLVDTSVII 217

Query:    91 PGAAVSELQFNIIDEE-PFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEET 149
             PGAAVSEL+F +I E+ PF V DLKITPLPVWHG+ YRSLGFRFGN+CYISDVS+IPEET
Sbjct:   218 PGAAVSELEFKVIHEDQPFVVNDLKITPLPVWHGSNYRSLGFRFGNVCYISDVSDIPEET 277

Query:   150 YPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEEL 209
             YP L+DC++LIMDALRPDRSS+THFGLPRALEEVRKI+PKRTLF GMMHLMDHEKV+EEL
Sbjct:   278 YPLLKDCDLLIMDALRPDRSSATHFGLPRALEEVRKIKPKRTLFTGMMHLMDHEKVSEEL 337

Query:   210 LKLMETEGLDVQLSYDGLRVPVML 233
              KL  TEGLDVQLSYDGLRVP+ +
Sbjct:   338 EKLRNTEGLDVQLSYDGLRVPISI 361
GO:0003824 "catalytic activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0008152 "metabolic process" evidence=ISS
GO:0016787 "hydrolase activity" evidence=IEA
POMBASE|SPCC777.06c SPCC777.06c "hydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
TAIR|locus:2009827 AT1G30300 "AT1G30300" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2140695 AT4G03610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2465 GSU_2465 "metallo-beta-lactamase family protein" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|Q5LPV6 SPO2743 "Uncharacterized protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2743 SPO_2743 "conserved hypothetical protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|APH_1062 APH_1062 "metallo-beta-lactamase family protein" [Anaplasma phagocytophilum HZ (taxid:212042)] Back     alignment and assigned GO terms
TIGR_CMR|ECH_0985 ECH_0985 "metallo-beta-lactamase family protein" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] Back     alignment and assigned GO terms
TIGR_CMR|NSE_0580 NSE_0580 "metallo-beta-lactamase family protein" [Neorickettsia sennetsu str. Miyayama (taxid:222891)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00034184001
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (350 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00003532001
SubName- Full=Chromosome undetermined scaffold_145, whole genome shotgun sequence; (317 aa)
•       0.475

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query233
PRK02113252 PRK02113, PRK02113, putative hydrolase; Provisiona 2e-34
COG1235269 COG1235, PhnP, Metal-dependent hydrolases of the b 3e-20
pfam12706197 pfam12706, Lactamase_B_2, Beta-lactamase superfami 8e-17
PRK11244250 PRK11244, phnP, carbon-phosphorus lyase complex ac 1e-10
TIGR03307238 TIGR03307, PhnP, phosphonate metabolism protein Ph 5e-10
smart00849177 smart00849, Lactamase_B, Metallo-beta-lactamase su 3e-09
pfam00753148 pfam00753, Lactamase_B, Metallo-beta-lactamase sup 7e-08
COG0491252 COG0491, GloB, Zn-dependent hydrolases, including 8e-05
COG2333293 COG2333, ComEC, Predicted hydrolase (metallo-beta- 3e-04
pfam07718279 pfam07718, Coatamer_beta_C, Coatamer beta C-termin 9e-04
COG1234292 COG1234, ElaC, Metal-dependent hydrolases of the b 0.001
>gnl|CDD|179371 PRK02113, PRK02113, putative hydrolase; Provisional Back     alignment and domain information 
 Score =  122 bits (309), Expect = 2e-34
 Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 27  ISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMK-KTHYYLVD 85
           +      IDAV+ITH H D +GGLDDLR +       +PIY      E ++ +  Y  V+
Sbjct: 60  LRLPFGKIDAVLITHEHYDHVGGLDDLRPFCR--FGEVPIYAEQYVAERLRSRMPYCFVE 117

Query: 86  TSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEI 145
            S   PG     L+  I  + PF V   ++TPL V HG     LG+R G + YI+D+  +
Sbjct: 118 HS--YPGVPNIPLR-EIEPDRPFLVNHTEVTPLRVMHGK-LPILGYRIGKMAYITDMLTM 173

Query: 146 PEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKV 205
           PEE Y  LQ  ++L+M+ALR      TH  L  ALE +++I  K T  I M H +     
Sbjct: 174 PEEEYEQLQGIDVLVMNALRI-APHPTHQSLEEALENIKRIGAKETYLIHMSHHIGLHAD 232

Query: 206 NEELLKLMETEGLDVQLSYDGLRV 229
            E+ L         V  +YDGL +
Sbjct: 233 VEKELP------PHVHFAYDGLEI 250

Length = 252
>gnl|CDD|224156 COG1235, PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] Back     alignment and domain information
>gnl|CDD|221727 pfam12706, Lactamase_B_2, Beta-lactamase superfamily domain Back     alignment and domain information
>gnl|CDD|183052 PRK11244, phnP, carbon-phosphorus lyase complex accessory protein; Provisional Back     alignment and domain information
>gnl|CDD|163212 TIGR03307, PhnP, phosphonate metabolism protein PhnP Back     alignment and domain information
>gnl|CDD|214854 smart00849, Lactamase_B, Metallo-beta-lactamase superfamily Back     alignment and domain information
>gnl|CDD|216099 pfam00753, Lactamase_B, Metallo-beta-lactamase superfamily Back     alignment and domain information
>gnl|CDD|223565 COG0491, GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only] Back     alignment and domain information
>gnl|CDD|225212 COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>gnl|CDD|219533 pfam07718, Coatamer_beta_C, Coatamer beta C-terminal region Back     alignment and domain information
>gnl|CDD|224155 COG1234, ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 233
PRK02113252 putative hydrolase; Provisional 99.96
TIGR02649303 true_RNase_BN ribonuclease BN. Members of this pro 99.95
TIGR02651299 RNase_Z ribonuclease Z. Processing of the 3-prime 99.94
PRK05184302 pyrroloquinoline quinone biosynthesis protein PqqB 99.94
TIGR02108302 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B. 99.94
PRK11244250 phnP carbon-phosphorus lyase complex accessory pro 99.93
PRK02126334 ribonuclease Z; Provisional 99.93
TIGR03307238 PhnP phosphonate metabolism protein PhnP. This fam 99.92
PRK00055270 ribonuclease Z; Reviewed 99.9
PRK00685228 metal-dependent hydrolase; Provisional 99.89
COG1234292 ElaC Metal-dependent hydrolases of the beta-lactam 99.89
TIGR02650277 RNase_Z_T_toga ribonuclease Z, Thermotoga type. Me 99.88
PF12706194 Lactamase_B_2: Beta-lactamase superfamily domain; 99.85
PRK04286298 hypothetical protein; Provisional 99.81
PRK11709355 putative L-ascorbate 6-phosphate lactonase; Provis 99.78
TIGR00649 422 MG423 conserved hypothetical protein. Contains an 99.75
KOG2121746 consensus Predicted metal-dependent hydrolase (bet 99.65
TIGR03675 630 arCOG00543 arCOG00543 universal archaeal KH-domain 99.64
COG1235269 PhnP Metal-dependent hydrolases of the beta-lactam 99.64
COG0595 555 mRNA degradation ribonucleases J1/J2 (metallo-beta 99.63
COG1236 427 YSH1 Predicted exonuclease of the beta-lactamase f 99.54
smart00849183 Lactamase_B Metallo-beta-lactamase superfamily. Ap 99.45
TIGR03413248 GSH_gloB hydroxyacylglutathione hydrolase. Members 99.44
COG1782 637 Predicted metal-dependent RNase, consists of a met 99.42
PLN02398329 hydroxyacylglutathione hydrolase 99.42
COG2220258 Predicted Zn-dependent hydrolases of the beta-lact 99.4
COG2333293 ComEC Predicted hydrolase (metallo-beta-lactamase 99.4
PF13483163 Lactamase_B_3: Beta-lactamase superfamily domain; 99.4
PLN02469258 hydroxyacylglutathione hydrolase 99.39
TIGR00361662 ComEC_Rec2 DNA internalization-related competence 99.37
PRK11921 394 metallo-beta-lactamase/flavodoxin domain-containin 99.36
PRK10241251 hydroxyacylglutathione hydrolase; Provisional 99.36
PRK05452 479 anaerobic nitric oxide reductase flavorubredoxin; 99.32
PF02112335 PDEase_II: cAMP phosphodiesterases class-II; Inter 99.32
PRK11539755 ComEC family competence protein; Provisional 99.29
COG1237259 Metal-dependent hydrolases of the beta-lactamase s 99.24
PLN02962251 hydroxyacylglutathione hydrolase 99.19
KOG0813265 consensus Glyoxylase [General function prediction 99.16
COG0426 388 FpaA Uncharacterized flavoproteins [Energy product 99.16
PF00753194 Lactamase_B: Metallo-beta-lactamase superfamily; I 99.07
COG0491252 GloB Zn-dependent hydrolases, including glyoxylase 99.02
COG5212356 PDE1 Low-affinity cAMP phosphodiesterase [Signal t 99.0
KOG1136 501 consensus Predicted cleavage and polyadenylation s 98.97
KOG1361 481 consensus Predicted hydrolase involved in interstr 98.95
KOG3798343 consensus Predicted Zn-dependent hydrolase (beta-l 98.85
COG2248304 Predicted hydrolase (metallo-beta-lactamase superf 98.81
KOG0814237 consensus Glyoxylase [General function prediction 98.63
KOG1137 668 consensus mRNA cleavage and polyadenylation factor 98.52
KOG1135 764 consensus mRNA cleavage and polyadenylation factor 97.5
PF14597199 Lactamase_B_5: Metallo-beta-lactamase superfamily; 97.14
COG2015 655 Alkyl sulfatase and related hydrolases [Secondary 95.42
PF0752143 RMMBL: RNA-metabolising metallo-beta-lactamase; In 92.81
PF1369163 Lactamase_B_4: tRNase Z endonuclease 88.94
TIGR00649422 MG423 conserved hypothetical protein. Contains an 86.58
TIGR03675630 arCOG00543 arCOG00543 universal archaeal KH-domain 82.5
>PRK02113 putative hydrolase; Provisional Back     alignment and domain information 
Probab=99.96  E-value=4.5e-28  Score=195.85  Aligned_cols=194  Identities=36%  Similarity=0.609  Sum_probs=149.4

Q ss_pred             hhHhcCCCCCCEEEeccCchhhcCChhHHHhhhccCccCceEEeChhhHHHHHhhcccccccccccCCCccceeeeeeeC
Q 026783           25 SCISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID  104 (233)
Q Consensus        25 ~~~~~~~~~i~~v~iTH~H~DH~ggl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~  104 (233)
                      ++++.++.++|+|||||.|+||++|++.+..+.  +.++++||+++.+.+.+.+...+.+... .+++  ....+++.++
T Consensus        58 ~l~~~~~~~id~I~lTH~H~DH~~gl~~l~~~~--~~~~~~i~~~~~~~~~l~~~~~~~~~~~-~~~~--~~~~~~~~~~  132 (252)
T PRK02113         58 QMLRLPFGKIDAVLITHEHYDHVGGLDDLRPFC--RFGEVPIYAEQYVAERLRSRMPYCFVEH-SYPG--VPNIPLREIE  132 (252)
T ss_pred             HHHhcCccccCEEEECCCChhhhCCHHHHHHhc--cCCCceEEECHHHHHHHHhhCCeeeccC-CCCC--CcceeeEEcC
Confidence            444557889999999999999999999886432  2347999999999888876543322111 1111  1234566664


Q ss_pred             -CCceEECCEEEEEEEecCCCCCceeEEEEccEEEcCCCCCCCcccccccCCCcEEEEcCcCCCCCCCCCCCHHHHHHHH
Q 026783          105 -EEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEV  183 (233)
Q Consensus       105 -~~~~~~~~~~i~~~~~~H~~g~~s~~~~i~~i~~~gD~~~~~~~~~~~~~~~d~li~e~~~~~~~~~~H~~~~~~~~~~  183 (233)
                       ++.+++++++|+++++.|+. .+++||++++++|+||++++++...+.++++|+|++|+... ....+|++++++.+.+
T Consensus       133 ~g~~~~~~~~~i~~~~~~H~~-~~~~gy~i~~i~y~~Dt~~~~~~~~~~~~~~DlLi~e~~~~-~~~~~H~t~~~a~~~~  210 (252)
T PRK02113        133 PDRPFLVNHTEVTPLRVMHGK-LPILGYRIGKMAYITDMLTMPEEEYEQLQGIDVLVMNALRI-APHPTHQSLEEALENI  210 (252)
T ss_pred             CCCCEEECCeEEEEEEecCCC-ccEEEEEeCCEEEccCCCCCCHHHHHHhcCCCEEEEhhhcC-CCCCCcCCHHHHHHHH
Confidence             68899999999999999985 37999999999999999987776778889999999999763 4568999999999999


Q ss_pred             HHcCCCeEEEEeeccCCChhHHHHHHHhhhhcCCCceEEcccCeEEec
Q 026783          184 RKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV  231 (233)
Q Consensus       184 ~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~v~~a~dg~~i~l  231 (233)
                      +++++++++++|+++....   .+++   .+....++.+|+|||++.+
T Consensus       211 ~~~~~k~l~l~H~s~~~~~---~~~~---~~~~~~~~~~A~Dg~~~~~  252 (252)
T PRK02113        211 KRIGAKETYLIHMSHHIGL---HADV---EKELPPHVHFAYDGLEIIF  252 (252)
T ss_pred             HHhCCCEEEEEcccccchh---HHHH---HHhCCCCceeccCceEEeC
Confidence            9999999999999886531   1222   2223347899999999874

>TIGR02649 true_RNase_BN ribonuclease BN Back     alignment and domain information
>TIGR02651 RNase_Z ribonuclease Z Back     alignment and domain information
>PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional Back     alignment and domain information
>TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B Back     alignment and domain information
>PRK11244 phnP carbon-phosphorus lyase complex accessory protein; Provisional Back     alignment and domain information
>PRK02126 ribonuclease Z; Provisional Back     alignment and domain information
>TIGR03307 PhnP phosphonate metabolism protein PhnP Back     alignment and domain information
>PRK00055 ribonuclease Z; Reviewed Back     alignment and domain information
>PRK00685 metal-dependent hydrolase; Provisional Back     alignment and domain information
>COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] Back     alignment and domain information
>TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type Back     alignment and domain information
>PF12706 Lactamase_B_2: Beta-lactamase superfamily domain; PDB: 3BV6_F 1WW1_A 2E7Y_A 3RPC_D 3ZWF_A 3JXP_A 1XTO_A 2CBN_A 3G1P_B 3P2U_A Back     alignment and domain information
>PRK04286 hypothetical protein; Provisional Back     alignment and domain information
>PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional Back     alignment and domain information
>TIGR00649 MG423 conserved hypothetical protein Back     alignment and domain information
>KOG2121 consensus Predicted metal-dependent hydrolase (beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>TIGR03675 arCOG00543 arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein Back     alignment and domain information
>COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only] Back     alignment and domain information
>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair] Back     alignment and domain information
>COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>smart00849 Lactamase_B Metallo-beta-lactamase superfamily Back     alignment and domain information
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase Back     alignment and domain information
>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] Back     alignment and domain information
>PLN02398 hydroxyacylglutathione hydrolase Back     alignment and domain information
>COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only] Back     alignment and domain information
>COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A Back     alignment and domain information
>PLN02469 hydroxyacylglutathione hydrolase Back     alignment and domain information
>TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2 Back     alignment and domain information
>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional Back     alignment and domain information
>PRK10241 hydroxyacylglutathione hydrolase; Provisional Back     alignment and domain information
>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional Back     alignment and domain information
>PF02112 PDEase_II: cAMP phosphodiesterases class-II; InterPro: IPR000396 Cyclic-AMP phosphodiesterase (3 Back     alignment and domain information
>PRK11539 ComEC family competence protein; Provisional Back     alignment and domain information
>COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] Back     alignment and domain information
>PLN02962 hydroxyacylglutathione hydrolase Back     alignment and domain information
>KOG0813 consensus Glyoxylase [General function prediction only] Back     alignment and domain information
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] Back     alignment and domain information
>PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain [] Back     alignment and domain information
>COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] Back     alignment and domain information
>COG5212 PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1136 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification] Back     alignment and domain information
>KOG1361 consensus Predicted hydrolase involved in interstrand cross-link repair [Replication, recombination and repair] Back     alignment and domain information
>KOG3798 consensus Predicted Zn-dependent hydrolase (beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only] Back     alignment and domain information
>KOG0814 consensus Glyoxylase [General function prediction only] Back     alignment and domain information
>KOG1137 consensus mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) [RNA processing and modification] Back     alignment and domain information
>KOG1135 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT2 (CPSF subunit) [RNA processing and modification] Back     alignment and domain information
>PF14597 Lactamase_B_5: Metallo-beta-lactamase superfamily; PDB: 2P97_B Back     alignment and domain information
>COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs Back     alignment and domain information
>PF13691 Lactamase_B_4: tRNase Z endonuclease Back     alignment and domain information
>TIGR00649 MG423 conserved hypothetical protein Back     alignment and domain information
>TIGR03675 arCOG00543 arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query233
3py6_A274 Crystal Structure Of A Beta-Lactamase-Like Protein 7e-21
3md7_A293 Crystal Structure Of A Beta-Lactamase-Like Protein 7e-21
3g1p_A258 Crystals Structure Of Phnp From E.Coli K-12 Length 4e-05
>pdb|3PY6|A Chain A, Crystal Structure Of A Beta-Lactamase-Like Protein From Brucella Melitensis Bound To Gmp Length = 274 Back     alignment and structure 
Iteration: 1

 Score = 97.1 bits (240), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 27  ISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDT 86
           I + +  +DA + TH HAD I G+DDLR +  +  R + +Y        +  T  Y  +T
Sbjct: 74  IDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFET 133
Query: 87  SGIIPGAAVSEL--QFNIIDEEPFTVQD----LKITPLPVWHGAGYRSLGFRFGNICYIS 140
                G++   +    +I  E PF+++     ++  P    HG    SLGFR G++ Y +
Sbjct: 134 P---VGSSYPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGD-IESLGFRIGSVVYCT 189
Query: 141 DVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLM 200
           DVS  PE++  +++D ++LI+ AL+  R   +HF L  ALE + K+ PKR +   M   +
Sbjct: 190 DVSAFPEQSLQYIKDADVLIIGALQ-YRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPL 248
Query: 201 DHEKVNEELLKLMETEGLDVQLSYDGLRVPVML 233
           D+E V  E    +E         YDGLR  V +
Sbjct: 249 DYETVMRETPHHVEP-------GYDGLRFEVAV 274
>pdb|3MD7|A Chain A, Crystal Structure Of A Beta-Lactamase-Like Protein Bound To Gmp From Brucella Melitensis Length = 293 Back     alignment and structure
>pdb|3G1P|A Chain A, Crystals Structure Of Phnp From E.Coli K-12 Length = 258 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query233
3md7_A293 Beta-lactamase-like; ssgcid, hydrolase, structural 7e-64
3g1p_A258 Protein PHNP; C-P lyase, phosphodiesterase, phosph 5e-57
3jxp_A321 Coenzyme PQQ synthesis protein B; alpha-beta prote 9e-22
1zkp_A268 Hypothetical protein BA1088; zinc binding protein, 1e-12
1k07_A263 FEZ-1 beta-lactamase; monomer with alpha-beta/BETA 4e-05
2xf4_A210 Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A 4e-05
2p4z_A284 Metal-dependent hydrolases of the beta-lactamase s 1e-04
3m8t_A294 'BLR6230 protein; subclass B3 beta-lactamase, zinc 1e-04
3bk2_A 562 RNAse J, metal dependent hydrolase; endoribonuclea 3e-04
3h3e_A267 Uncharacterized protein TM1679; structural genomic 4e-04
2az4_A 429 Hypothetical protein EF2904; structural genomics, 4e-04
4ax1_B303 Metallo-beta-lactamase AIM-1; hydrolase, antibioti 6e-04
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A* Length = 293 Back     alignment and structure
 Score =  199 bits (508), Expect = 7e-64
 Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 14/212 (6%)

Query: 26  CISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVD 85
            I + +  +DA + TH HAD I G+DDLR +  +  R + +Y        +  T  Y  +
Sbjct: 92  MIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFE 151

Query: 86  TSGIIPGAAVSELQFNIIDEEPFTVQ----DLKITPLPVWHGAGYRSLGFRFGNICYISD 141
           T        +  +  +I  E PF+++     ++  P    HG    SLGFR G++ Y +D
Sbjct: 152 TPVGSSYPPILSM-HDIAPETPFSIEGAGGAIRFEPFSQVHG-DIESLGFRIGSVVYCTD 209

Query: 142 VSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMD 201
           VS  PE++  +++D ++LI+ AL+  R   +HF L  ALE + K+ PKR +   M   +D
Sbjct: 210 VSAFPEQSLQYIKDADVLIIGALQY-RPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLD 268

Query: 202 HEKVNEELLKLMETEGLDVQLSYDGLRVPVML 233
           +E V  E           V+  YDGLR  V +
Sbjct: 269 YETVMRETPH-------HVEPGYDGLRFEVAV 293
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A Length = 258 Back     alignment and structure
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} PDB: 1xto_A Length = 321 Back     alignment and structure
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 Length = 268 Back     alignment and structure
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A Length = 263 Back     alignment and structure
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} Length = 210 Back     alignment and structure
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} Length = 284 Back     alignment and structure
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A Length = 294 Back     alignment and structure
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A* Length = 562 Back     alignment and structure
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima} Length = 267 Back     alignment and structure
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10 Length = 429 Back     alignment and structure
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query233
3md7_A293 Beta-lactamase-like; ssgcid, hydrolase, structural 99.97
3jxp_A321 Coenzyme PQQ synthesis protein B; alpha-beta prote 99.95
2cbn_A306 Ribonuclease Z; phosphodiesterase beta lactamase t 99.95
3g1p_A258 Protein PHNP; C-P lyase, phosphodiesterase, phosph 99.95
1y44_A320 Ribonuclease Z; zinc-dependent metal hydrolase, hy 99.94
1zkp_A268 Hypothetical protein BA1088; zinc binding protein, 99.94
2e7y_A280 TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, 99.94
3zwf_A368 Zinc phosphodiesterase ELAC protein 1; beta-lactam 99.93
3rpc_A264 Possible metal-dependent hydrolase; structural gen 99.9
2wyl_A360 L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 99.86
3bv6_A379 Metal-dependent hydrolase; metallo protein, beta-l 99.86
3kl7_A235 Putative metal-dependent hydrolase; structural gen 99.85
4b87_A 367 DNA cross-LINK repair 1A protein; dclre1A, DCLRE, 99.8
2az4_A 429 Hypothetical protein EF2904; structural genomics, 99.78
1vjn_A220 Zn-dependent hydrolase of metallo-beta-lactamase s 99.75
3zdk_A 336 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A 99.75
2p4z_A284 Metal-dependent hydrolases of the beta-lactamase s 99.74
3bk2_A 562 RNAse J, metal dependent hydrolase; endoribonuclea 99.72
3iek_A 431 Ribonuclease TTHA0252; metallo beta lactamase fold 99.72
3zq4_A 555 Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat 99.7
3af5_A 651 Putative uncharacterized protein PH1404; archaeal 99.68
2i7t_A 459 Cleavage and polyadenylation specificity factor 73 99.65
2ycb_A 636 Beta-CAsp RNAse, cleavage and polyadenylation spec 99.64
2xr1_A 640 Cleavage and polyadenylation specificity factor 1 99.63
2i7x_A 717 Protein CFT2; polyadenylation, metallo-B-lactamase 99.63
3adr_A261 Putative uncharacterized protein ST1585; quorum se 99.58
2bib_A 547 CBPE, teichoic acid phosphorylcholine esterase/ ch 99.55
3m8t_A294 'BLR6230 protein; subclass B3 beta-lactamase, zinc 99.52
2ohh_A 404 Type A flavoprotein FPRA; beta-lactamase like doma 99.5
1ycg_A 398 Nitric oxide reductase; DIIRON site, oxidoreductas 99.5
1e5d_A 402 Rubredoxin\:oxygen oxidoreductase; oxygenreductase 99.49
3l6n_A219 Metallo-beta-lactamase; zinc, hydolase, antibiotic 99.45
4efz_A298 Metallo-beta-lactamase family protein; structural 99.42
4ax1_B303 Metallo-beta-lactamase AIM-1; hydrolase, antibioti 99.41
1k07_A263 FEZ-1 beta-lactamase; monomer with alpha-beta/BETA 99.41
2xf4_A210 Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A 99.4
1a7t_A232 Metallo-beta-lactamase; hydrolase (beta-lactamase) 99.39
1xm8_A254 Glyoxalase II; structural genomics, protein struct 99.38
3hnn_A262 Putative diflavin flavoprotein A 5; PSI-2, protein 99.37
3q6v_A233 Beta-lactamase; metalloenzyme, alpha-beta, hydrola 99.33
1sml_A269 Protein (penicillinase); metallo-beta-lactamase, a 99.31
1qh5_A260 Glyoxalase II, protein (hydroxyacylglutathione hyd 99.31
2qed_A258 Hydroxyacylglutathione hydrolase; metallo-B- super 99.3
1m2x_A223 Class B carbapenemase BLAB-1; alpha-beta/BETA-alph 99.3
3tp9_A 474 Beta-lactamase and rhodanese domain protein; struc 99.29
4ad9_A289 Lactb2, beta-lactamase-like protein 2; hydrolase, 99.28
2vw8_A303 PA1000, PQSE; quinolone signal response protein, s 99.27
3r2u_A 466 Metallo-beta-lactamase family protein; structural 99.27
2q9u_A 414 A-type flavoprotein; flavodoxin like, beta lactama 99.27
3dha_A254 N-acyl homoserine lactone hydrolase; zinc bimetall 99.27
4hl2_A243 Beta-lactamase NDM-1; structural genomics, PSI-bio 99.25
1mqo_A227 Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd 99.25
2r2d_A276 AGR_PTI_140P, Zn-dependent hydrolases; lactonase, 99.24
2zwr_A207 Metallo-beta-lactamase superfamily protein; hydrol 99.23
2gcu_A245 Putative hydroxyacylglutathione hydrolase 3; ethyl 99.22
2fhx_A246 SPM-1; metallo-beta-lactamase, dinuclear zinc, ant 99.21
4dik_A 410 Flavoprotein; TM0755, electron transport, DI-iron 99.2
2y8b_A265 Metallo-B-lactamase; hydrolase, cephalosporins, an 99.2
3iog_A227 Beta-lactamase; hydrolase, antibiotic resistance, 99.18
2p18_A311 Glyoxalase II; metalloprotein, beta sandwich, alph 99.18
1jjt_A228 IMP-1 metallo beta-lactamase; metallo-beta-lactama 99.18
2zo4_A317 Metallo-beta-lactamase family protein; hydrolase; 99.15
4eyb_A270 Beta-lactamase NDM-1; metallo beta lactamase, anti 99.15
3esh_A280 Protein similar to metal-dependent hydrolase; stru 99.11
3h3e_A267 Uncharacterized protein TM1679; structural genomic 99.07
3aj3_A274 MLR6805 protein, 4-pyridoxolactonase; Zn-protein, 99.06
1ztc_A221 Hypothetical protein TM0894; structural genomics, 98.92
2cfu_A 658 SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1 98.91
1p9e_A331 Methyl parathion hydrolase; Zn containing; 2.40A { 98.87
2p97_A201 Hypothetical protein; putative metal-dependent hyd 98.84
2yhe_A 668 SEC-alkyl sulfatase; hydrolase, inversion, metallo 98.03
3bk2_A 562 RNAse J, metal dependent hydrolase; endoribonuclea 88.59
3zq4_A 555 Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat 85.12
2i7t_A459 Cleavage and polyadenylation specificity factor 73 84.44
2az4_A429 Hypothetical protein EF2904; structural genomics, 84.08
2ycb_A636 Beta-CAsp RNAse, cleavage and polyadenylation spec 83.96
3af5_A651 Putative uncharacterized protein PH1404; archaeal 83.87
2xr1_A640 Cleavage and polyadenylation specificity factor 1 83.77
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A* Back     alignment and structure
Probab=99.97  E-value=1.9e-30  Score=213.00  Aligned_cols=204  Identities=33%  Similarity=0.569  Sum_probs=160.7

Q ss_pred             cchhhh-------hhHhcCCCCCCEEEeccCchhhcCChhHHHhhhccCccCceEEeChhhHHHHHhhcccccccccccC
Q 026783           19 TCLIIT-------SCISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIP   91 (233)
Q Consensus        19 ~~~l~~-------~~~~~~~~~i~~v~iTH~H~DH~ggl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~   91 (233)
                      ..+++|       ++.+.++.+|++|||||.|.||++|++.+......+..+++||+++.+.+.+...+.+.+..... .
T Consensus        78 ~~iLID~G~~~~~~l~~~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~~~~~~~-~  156 (293)
T 3md7_A           78 TVVVIDTGPDFRMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPVG-S  156 (293)
T ss_dssp             EEEEECCCTTHHHHHHHHTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTSCCTT-C
T ss_pred             eEEEEECCccHHHHHHhcCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhhhccccc-c
Confidence            466666       45556788999999999999999999988764322344799999999999998765543322100 0


Q ss_pred             CCccceeeeeeeC-CCceEECC----EEEEEEEecCCCCCceeEEEEccEEEcCCCCCCCcccccccCCCcEEEEcCcCC
Q 026783           92 GAAVSELQFNIID-EEPFTVQD----LKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRP  166 (233)
Q Consensus        92 g~~~~~~~~~~~~-~~~~~~~~----~~i~~~~~~H~~g~~s~~~~i~~i~~~gD~~~~~~~~~~~~~~~d~li~e~~~~  166 (233)
                      + ..+..+++.++ ++.+++++    ++|+++++.|++ ..++||++++++|+||++++++++.+.++++|++++|++..
T Consensus       157 ~-~~~~~~~~~l~~g~~~~~g~~~~~~~v~~~~~~H~~-~~~~g~~i~~~~y~gDt~~~~~~~~~~~~~~Dlli~e~~~~  234 (293)
T 3md7_A          157 S-YPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGD-IESLGFRIGSVVYCTDVSAFPEQSLQYIKDADVLIIGALQY  234 (293)
T ss_dssp             C-CCCCEEEEECCTTCCEEECCTTCCEEEEEEEEEETT-EEEEEEEETTEEEECSCSBCCGGGHHHHTTCSEEEEECCCS
T ss_pred             C-CCCceEEEEcCCCCcEEECCCCCcEEEEEEEecCCC-CCEEEEEEeEEEEECCCCCCCHHHHHHhcCCCEEEEeCccC
Confidence            0 11234566665 68999999    999999999986 38999999999999999987778888899999999999865


Q ss_pred             CCCCCCCCCHHHHHHHHHHcCCCeEEEEeeccCCChhHHHHHHHhhhhcCCCceEEcccCeEEeccC
Q 026783          167 DRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML  233 (233)
Q Consensus       167 ~~~~~~H~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~v~~a~dg~~i~l~~  233 (233)
                      . ...+|++++++.+.++++++++++++|+++....++    +   .+....++.+|+|||+|+|+.
T Consensus       235 ~-~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~----~---~~~~~~~v~~a~DG~~i~l~~  293 (293)
T 3md7_A          235 R-PHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDYET----V---MRETPHHVEPGYDGLRFEVAV  293 (293)
T ss_dssp             S-CBTTBCCHHHHHHHHHHHCCSEEEEESBCTTCCHHH----H---HHHSCTTEEECCTTCEEEECC
T ss_pred             C-CCCCCCCHHHHHHHHHHcCCCEEEEECCCCCCCHHH----H---HhhcCCCcEEeeCCcEEEecC
Confidence            4 568999999999999999999999999999875432    1   122345999999999999863
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A Back     alignment and structure
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 Back     alignment and structure
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A Back     alignment and structure
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* Back     alignment and structure
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 Back     alignment and structure
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A Back     alignment and structure
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens} Back     alignment and structure
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula} Back     alignment and structure
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A* Back     alignment and structure
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor} Back     alignment and structure
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens} Back     alignment and structure
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10 Back     alignment and structure
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4 Back     alignment and structure
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens} Back     alignment and structure
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} Back     alignment and structure
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A* Back     alignment and structure
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A* Back     alignment and structure
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis} Back     alignment and structure
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* Back     alignment and structure
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A Back     alignment and structure
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} Back     alignment and structure
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10 Back     alignment and structure
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} Back     alignment and structure
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A* Back     alignment and structure
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A Back     alignment and structure
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* Back     alignment and structure
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* Back     alignment and structure
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 Back     alignment and structure
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0 Back     alignment and structure
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} Back     alignment and structure
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B Back     alignment and structure
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A Back     alignment and structure
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} Back     alignment and structure
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* Back     alignment and structure
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A Back     alignment and structure
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A Back     alignment and structure
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Back     alignment and structure
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* Back     alignment and structure
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 Back     alignment and structure
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 Back     alignment and structure
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} Back     alignment and structure
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* Back     alignment and structure
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Back     alignment and structure
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Back     alignment and structure
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A Back     alignment and structure
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Back     alignment and structure
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... Back     alignment and structure
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} Back     alignment and structure
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A Back     alignment and structure
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} Back     alignment and structure
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} Back     alignment and structure
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A* Back     alignment and structure
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A Back     alignment and structure
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A Back     alignment and structure
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* Back     alignment and structure
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A Back     alignment and structure
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} Back     alignment and structure
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Back     alignment and structure
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} Back     alignment and structure
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima} Back     alignment and structure
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A Back     alignment and structure
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 Back     alignment and structure
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A* Back     alignment and structure
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 Back     alignment and structure
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 Back     alignment and structure
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP} Back     alignment and structure
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A* Back     alignment and structure
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis} Back     alignment and structure
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A Back     alignment and structure
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10 Back     alignment and structure
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* Back     alignment and structure
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 233
d1xtoa_304 d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, P 1e-14
d1zkpa1244 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (B 1e-07
d2az4a1183 d.157.1.10 (A:56-238) Hypothetical protein EF2904 1e-05
d2dkfa1 431 d.157.1.10 (A:1-431) Putative RNA-degradation prot 1e-05
d1y44a1307 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Baci 7e-05
d2i7xa1 514 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two 1e-04
d2e7ya1280 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Ther 2e-04
d2i7ta1 451 d.157.1.10 (A:9-459) Cleavage and polyadenylation 0.002
d1wraa1305 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholi 0.002
d2cfua2 505 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudo 0.003
>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} Length = 304 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Coenzyme PQQ synthesis protein B, PqqB
domain: Coenzyme PQQ synthesis protein B, PqqB
species: Pseudomonas putida [TaxId: 303]

 Score = 69.4 bits (168), Expect = 1e-14
 Identities = 32/240 (13%), Positives = 71/240 (29%), Gaps = 41/240 (17%)

Query: 26  CISARIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVD 85
             + R   I+A+++  S  D   GL  LR+          ++      + +         
Sbjct: 73  ARALRDTGINAIVLLDSQIDHTTGLLSLREG-----CPHQVWCTDMVHQDLTTGFPLFNM 127

Query: 86  TSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYR-----------------S 128
            S    G   + ++            +LK TP P+   A                     
Sbjct: 128 LSHWNGGLQWNRIELE-GSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVE 186

Query: 129 LGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPD----------------RSSST 172
                G + Y   + ++ E+    +   + L++D    +                     
Sbjct: 187 DTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWEDDEMQRRGVGTRTGREMGHLA 246

Query: 173 HFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVM 232
             G    LE +     +R + I + +       N      +   G  V++++DG+ + ++
Sbjct: 247 QNGPGGMLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVLRRG--VEVAFDGMSIELL 304
>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} Length = 244 Back     information, alignment and structure
>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} Length = 183 Back     information, alignment and structure
>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Length = 431 Back     information, alignment and structure
>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]} Length = 307 Back     information, alignment and structure
>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 514 Back     information, alignment and structure
>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} Length = 280 Back     information, alignment and structure
>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 451 Back     information, alignment and structure
>d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Length = 305 Back     information, alignment and structure
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Length = 505 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query233
d1zkpa1244 Hypothetical protein BA1088 (BAS1016) {Bacillus an 99.95
d1y44a1307 Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId 99.94
d2cbna1305 Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 99.94
d1xtoa_304 Coenzyme PQQ synthesis protein B, PqqB {Pseudomona 99.87
d2e7ya1280 Ribonuclease Z (RNase Z) {Thermotoga maritima [Tax 99.86
d2az4a1183 Hypothetical protein EF2904 {Enterococcus faecalis 99.78
d2dkfa1 431 Putative RNA-degradation protein TTHA0252 {Thermus 99.68
d2i7xa1 514 Cleavage factor two protein 2, CFT2 {Baker's yeast 99.53
d1vjna_209 Hypothetical protein TM0207 {Thermotoga maritima [ 99.48
d2i7ta1 451 Cleavage and polyadenylation specificity factor su 99.48
d1k07a_262 Zn metallo-beta-lactamase {Fluoribacter gormanii, 99.43
d1xm8a_254 Glyoxalase II (hydroxyacylglutathione hydrolase) { 99.41
d2aioa1266 Zn metallo-beta-lactamase {Xanthomonas maltophilia 99.35
d2gmna1264 Zn metallo-beta-lactamase {Bradyrhizobium japonicu 99.3
d2qeda1251 Glyoxalase II (hydroxyacylglutathione hydrolase) { 99.3
d1qh5a_260 Glyoxalase II (hydroxyacylglutathione hydrolase) { 99.29
d2q0ia1298 Quinolone signal response protein PqsE {Pseudomona 99.28
d1wraa1305 Teichoic acid phosphorylcholine esterase Pce (LytD 99.24
d1ycga2249 Nitric oxide reductase N-terminal domain {Moorella 99.23
d1znba_230 Zn metallo-beta-lactamase {Bacteroides fragilis [T 99.19
d1e5da2249 Rubredoxin oxygen:oxidoreductase (ROO), N-terminal 99.18
d1m2xa_219 Zn metallo-beta-lactamase {Chryseobacterium mening 99.15
d1ko3a_230 Zn metallo-beta-lactamase {Pseudomonas aeruginosa, 99.1
d1jjta_220 Zn metallo-beta-lactamase {Pseudomonas aeruginosa, 99.07
d1x8ha_228 Zn metallo-beta-lactamase {Aeromonas hydrophila, C 99.04
d1vmea2250 ROO-like flavoprotein TM0755, N-terminal domain {T 99.01
d1mqoa_221 Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 99.0
d1ztca1207 Hypothetical protein TM0894 {Thermotoga maritima [ 98.88
d1p9ea_294 Methyl parathion hydrolase {Pseudomonas sp. WBC-3 98.85
d2cfua2 505 Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI 98.73
d2p97a1200 Hypothetical protein Ava3068 {Anabaena variabilis 98.34
d2i7ta1451 Cleavage and polyadenylation specificity factor su 94.08
d2i7xa1514 Cleavage factor two protein 2, CFT2 {Baker's yeast 91.15
d2dkfa1431 Putative RNA-degradation protein TTHA0252 {Thermus 90.61
>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: YhfI-like
domain: Hypothetical protein BA1088 (BAS1016)
species: Bacillus anthracis [TaxId: 1392]

Probab=99.95  E-value=9.7e-27  Score=183.85  Aligned_cols=201  Identities=18%  Similarity=0.200  Sum_probs=151.5

Q ss_pred             EEEeeecCccchhhhh-------hH-hcCCCCCCEEEeccCchhhcCChhHHHhhh------ccCccCceEEeChhhHHH
Q 026783           10 LFVGFLPMGTCLIITS-------CI-SARIRTIDAVIITHSHADAIGGLDDLRDWT------NNVQRHIPIYVAMRDFEV   75 (233)
Q Consensus        10 ~~~~~~~~~~~~l~~~-------~~-~~~~~~i~~v~iTH~H~DH~ggl~~l~~~~------~~~~~~~~v~~~~~~~~~   75 (233)
                      ++++. .++..+|+|.       +. ..++.+||+||+||.|.||++|++.+..+.      ......++||++......
T Consensus        21 ~~lv~-~~~~~iLID~G~~~~~~l~~~~~~~~id~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~   99 (244)
T d1zkpa1          21 GYLFE-HDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENG   99 (244)
T ss_dssp             EEEEE-ETTEEEEECCCTTHHHHHTTTCCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHH
T ss_pred             EEEEE-ECCeEEEEeCCCcHHHHHHhhcCCccCceEEeecccccccCchhhhhhhheecccccCCCCCceeeechhhHhH
Confidence            45444 3444555552       22 236788999999999999999999886431      123446899999887776


Q ss_pred             HHhhcccccccccccCCCccceeeeeee-CCCceEECCEEEEEEEecCCCCCceeEEEEc----cEEEcCCCCCCCcccc
Q 026783           76 MKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVWHGAGYRSLGFRFG----NICYISDVSEIPEETY  150 (233)
Q Consensus        76 l~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~H~~g~~s~~~~i~----~i~~~gD~~~~~~~~~  150 (233)
                      +.....             ....+...+ +++.+++++++++++++.|..  .+++|+++    +++|+||+++.++ +.
T Consensus       100 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~--~~~~~~i~~~~~~~~~~gDt~~~~~-~~  163 (244)
T d1zkpa1         100 FHSLTH-------------EPHTKGIPYNPEETLQIGPFSISFLKTVHPV--TCFAMRITAGNDIVVYSADSSYIPE-FI  163 (244)
T ss_dssp             HHTTCB-------------TTTEEEEECCTTSCEEETTEEEEEEECCSSS--CCEEEEEEETTEEEEECCSCCCCTT-HH
T ss_pred             hhhhcc-------------cccccceecccceEEEEeccceeeeeecccc--cccceeeccccccccccccccccch-hh
Confidence            655321             112233344 478999999999999999987  78899996    8999999998754 77


Q ss_pred             cccCCCcEEEEcCcCCCC---CCCCCCCHHHHHHHHHHcCCCeEEEEeeccCCChhHHHHHHHhhhhcCCCceEEcccCe
Q 026783          151 PFLQDCEILIMDALRPDR---SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGL  227 (233)
Q Consensus       151 ~~~~~~d~li~e~~~~~~---~~~~H~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~v~~a~dg~  227 (233)
                      ++++++|++++|++++..   ...+|++++++.++++++++++++++|+.+..+.++..++++   +.+..+|.+|+|||
T Consensus       164 ~~~~~~D~li~e~~~~~~~~~~~~~H~~~~e~~~~~~~~~~k~~vl~H~~~~~~~~~~~~~~~---~~~~~~v~~a~dG~  240 (244)
T d1zkpa1         164 PFTKDADLFICECNMYAHQEAAKAGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAK---QIFSGHITLAHSGY  240 (244)
T ss_dssp             HHHTTCSEEEEECCBCTTSCCGGGTCCBHHHHHHHHHHTTCSEEEEESBCSSSCTHHHHHHHH---TTCCSEEEECCTTC
T ss_pred             hhhcccceeEEeecccchhhhhcccCCCHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHH---HhcCCCEEEecCCC
Confidence            888899999999987642   356799999999999999999999999998876554444443   34556899999999


Q ss_pred             EEe
Q 026783          228 RVP  230 (233)
Q Consensus       228 ~i~  230 (233)
                      +++
T Consensus       241 ~~~  243 (244)
T d1zkpa1         241 VWN  243 (244)
T ss_dssp             EEE
T ss_pred             Eee
Confidence            875
>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} Back     information, alignment and structure
>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} Back     information, alignment and structure
>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure
>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} Back     information, alignment and structure
>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} Back     information, alignment and structure
>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} Back     information, alignment and structure
>d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} Back     information, alignment and structure
>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} Back     information, alignment and structure
>d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} Back     information, alignment and structure
>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} Back     information, alignment and structure
>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} Back     information, alignment and structure
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure