Citrus Sinensis ID: 026920


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-
MGFLQFNAAAAAILFSLLLPLLLLNLHSAKADTFTNNINATTTATENGNDFVPERKSLGGGKCNIFQGKWVYDASYPLYSHCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGGNAWRGMDMLIFNTWHWWTHTGRSQP
cccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEcEEEEccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHccccccccEEEEEccEEEEEEccccEEEEEEEEcEEEEEEEcccccEEEEcccccccccccccEEEEcccccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHcccccccccccccEEEEccccccccccccccccccccccccccHHHcEEEEcccccccccccHHHHHHHHcccEEEEEcccccHcHHHHHHHHHHHHccccccEEEEcccEEEEEEEcccEEEEEEEccEEEEEcccccccEEEEcccccccccccccEEEEEcEEEEcccccccc
MGFLQFNAAAAAILFSLLLPLLLLNLHsakadtftnninatttatengndfvperkslgggkcnifqgkwvydasyplyshcpfvdpefdcqkygrpddiylkyrwqpfscsiprfnglyflekfrgkkimfvgdslsLNQWQSLACMIhswapktkYSVVRTAVLSSITFQEFGLQILLYRTTYLVDlvrepagtvlrldsikggnawrGMDMLIFNTWHwwthtgrsqp
MGFLQFNAAAAAILFSLLLPLLLLNLHSAKADTFTNNINATttatengndfvperkslgggKCNIFQGKWVYDASYPLYSHCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVRepagtvlrldsikggnAWRGMDMLIFNTWHWWTHTGRSQP
MGFlqfnaaaaailfslllpllllnlhsakadtftnninatttatengnDFVPERKSLGGGKCNIFQGKWVYDASYPLYSHCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGGNAWRGMDMLIFNTWHWWTHTGRSQP
**FLQFNAAAAAILFSLLLPLLLLNLHSAKADTFTNNINATTTATENGNDFVPERKSLGGGKCNIFQGKWVYDASYPLYSHCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGGNAWRGMDMLIFNTWHWWTH******
******NAAAAAILFSLLLPLLLLNLHS***********************************NIFQGKWVYDASYPLYSHCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGGNAWRGMDMLIFNTWHWWTHTG****
MGFLQFNAAAAAILFSLLLPLLLLNLHSAKADTFTNNINATTTATENGNDFVPERKSLGGGKCNIFQGKWVYDASYPLYSHCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGGNAWRGMDMLIFNTWHWWTHTGRSQP
MGFLQFNAAAAAILFSLLLPLLLLNLHS********************************GKCNIFQGKWVYDASYPLYSHCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGGNAWRGMDMLIFNTWHWWTHT*****
oooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGFLQFNAAAAAILFSLLLPLLLLNLHSAKADTFTNNINATTTATENGNDFVPERKSLGGGKCNIFQGKWVYDASYPLYSHCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGGNAWRGMDMLIFNTWHWWTHTGRSQP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query231
449463298 371 PREDICTED: uncharacterized protein LOC10 0.757 0.471 0.745 3e-75
225446561 364 PREDICTED: uncharacterized protein LOC10 0.839 0.532 0.632 8e-75
255568301 350 conserved hypothetical protein [Ricinus 0.857 0.565 0.639 3e-74
224145260317 predicted protein [Populus trichocarpa] 0.709 0.517 0.775 4e-74
356543894322 PREDICTED: uncharacterized protein LOC10 0.800 0.574 0.686 2e-73
224135837 368 predicted protein [Populus trichocarpa] 0.883 0.554 0.633 2e-73
356543892 375 PREDICTED: uncharacterized protein LOC10 0.800 0.493 0.686 2e-73
75860382 371 unknown [Pisum sativum] 0.761 0.474 0.716 7e-73
356549862 369 PREDICTED: uncharacterized protein LOC10 0.744 0.466 0.712 1e-72
18406003 367 protein trichome birefringence-like 39 [ 0.831 0.523 0.637 4e-72
>gi|449463298|ref|XP_004149371.1| PREDICTED: uncharacterized protein LOC101205461 [Cucumis sativus] gi|449509085|ref|XP_004163488.1| PREDICTED: uncharacterized protein LOC101226154 [Cucumis sativus] Back     alignment and taxonomy information
 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 132/177 (74%), Positives = 151/177 (85%), Gaps = 2/177 (1%)

Query: 57  SLGGGKCNIFQGKWVYDASYPLY--SHCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCSIP 114
           SL  G CN++QGKWV+D+SYPLY  S CPFVDP+F+CQKYGRPD  YLKYRWQPF+C IP
Sbjct: 46  SLAAGNCNLYQGKWVFDSSYPLYDSSTCPFVDPQFNCQKYGRPDKSYLKYRWQPFACGIP 105

Query: 115 RFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEF 174
           RFNGL FLEK+RGKKIMFVGDSLSLNQW+SLACMIH+  P ++ S VR   LSS+TFQ +
Sbjct: 106 RFNGLNFLEKWRGKKIMFVGDSLSLNQWESLACMIHASVPNSQSSFVRRDGLSSVTFQVY 165

Query: 175 GLQILLYRTTYLVDLVREPAGTVLRLDSIKGGNAWRGMDMLIFNTWHWWTHTGRSQP 231
           G+++ LYRT YLVD+V E  GTVL+LDSIK GNAWRGMDMLIFNTWHWWTHTG SQP
Sbjct: 166 GVELWLYRTPYLVDMVNEKIGTVLKLDSIKSGNAWRGMDMLIFNTWHWWTHTGSSQP 222




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446561|ref|XP_002279857.1| PREDICTED: uncharacterized protein LOC100255693 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255568301|ref|XP_002525125.1| conserved hypothetical protein [Ricinus communis] gi|223535584|gb|EEF37252.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224145260|ref|XP_002325581.1| predicted protein [Populus trichocarpa] gi|222862456|gb|EEE99962.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356543894|ref|XP_003540393.1| PREDICTED: uncharacterized protein LOC100797993 isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|224135837|ref|XP_002327316.1| predicted protein [Populus trichocarpa] gi|222835686|gb|EEE74121.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356543892|ref|XP_003540392.1| PREDICTED: uncharacterized protein LOC100797993 isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|75860382|gb|ABA29158.1| unknown [Pisum sativum] Back     alignment and taxonomy information
>gi|356549862|ref|XP_003543309.1| PREDICTED: uncharacterized protein LOC100813837 [Glycine max] Back     alignment and taxonomy information
>gi|18406003|ref|NP_565975.1| protein trichome birefringence-like 39 [Arabidopsis thaliana] gi|4559334|gb|AAD22996.1| expressed protein [Arabidopsis thaliana] gi|14334590|gb|AAK59473.1| unknown protein [Arabidopsis thaliana] gi|17104519|gb|AAL34148.1| unknown protein [Arabidopsis thaliana] gi|330255046|gb|AEC10140.1| protein trichome birefringence-like 39 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query231
TAIR|locus:2041574 367 TBL39 "AT2G42570" [Arabidopsis 0.766 0.482 0.670 2.6e-70
TAIR|locus:2055878 364 AT2G31110 "AT2G31110" [Arabido 0.753 0.478 0.625 2.7e-61
TAIR|locus:2055425 385 TBL37 "AT2G34070" [Arabidopsis 0.753 0.451 0.605 3.9e-60
TAIR|locus:2029959 380 TBL38 "AT1G29050" [Arabidopsis 0.761 0.463 0.586 5e-60
TAIR|locus:2099402 356 TBL41 "TRICHOME BIREFRINGENCE- 0.731 0.474 0.596 6.1e-55
TAIR|locus:2037498 359 TBL42 "TRICHOME BIREFRINGENCE- 0.722 0.465 0.549 1.7e-50
TAIR|locus:2178813 402 PMR5 "AT5G58600" [Arabidopsis 0.727 0.417 0.534 1.2e-47
TAIR|locus:2045688 398 TBL45 "AT2G30010" [Arabidopsis 0.714 0.414 0.502 3.8e-46
TAIR|locus:2080280 379 TBL36 "AT3G54260" [Arabidopsis 0.718 0.437 0.444 1.2e-35
TAIR|locus:2182157 464 TBL11 "TRICHOME BIREFRINGENCE- 0.714 0.355 0.409 2.2e-34
TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
 Identities = 120/179 (67%), Positives = 145/179 (81%)

Query:    55 RKSLGGGKCNIFQGKWVYDASYPLYS--HCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCS 112
             R+ L  G+CN F+G WVYD  YPLY    CPF+DP+F+C+KYGRPD+ YLKYRWQP SCS
Sbjct:    39 RRELASGRCNWFRGNWVYDVKYPLYDPYKCPFIDPQFNCKKYGRPDNAYLKYRWQPSSCS 98

Query:   113 IPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQ 172
             +PRFNGLYFL + RGKKIMFVGDSLS N WQSLAC+IHSW P T+Y+++R   L+S+TF+
Sbjct:    99 LPRFNGLYFLRRMRGKKIMFVGDSLSTNMWQSLACLIHSWVPNTRYTLIRQKGLASLTFE 158

Query:   173 EFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGGNAWRGMDMLIFNTWHWWTHTGRSQP 231
             E+G+ +LLYRT +LVDL  E  G VL+LDSIK GN WRGMD+LIFN+WHWWTHT   QP
Sbjct:   159 EYGVTLLLYRTQFLVDLNVEKVGRVLKLDSIKQGNMWRGMDVLIFNSWHWWTHTEHIQP 217




GO:0008150 "biological_process" evidence=ND
GO:0005773 "vacuole" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00018708001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (364 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query231
PLN02629 387 PLN02629, PLN02629, powdery mildew resistance 5 6e-70
pfam13839 270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 2e-40
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 4e-27
>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
 Score =  218 bits (557), Expect = 6e-70
 Identities = 94/172 (54%), Positives = 115/172 (66%), Gaps = 4/172 (2%)

Query: 63  CNIFQGKWVYDASYPLY--SHCP-FVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGL 119
           C +F G WV D SYPLY  S CP  +DPEF+CQ YGRPD  YLKYRWQP +C +PRFNGL
Sbjct: 53  CALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGL 112

Query: 120 YFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQIL 179
            FL K +GK +MFVGDSL  NQW+SL C+I S  P T+  + R   LS+  F ++G+ I 
Sbjct: 113 EFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSIS 172

Query: 180 LYRTTYLVDLVREPAGTVLRLDSIKG-GNAWRGMDMLIFNTWHWWTHTGRSQ 230
            Y+  YLVD+       VL+L+ I G  NAWR  D+LIFNT HWW+H G  Q
Sbjct: 173 FYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQ 224


Length = 387

>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 231
PLN02629 387 powdery mildew resistance 5 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.95
PF13839 263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 99.9
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 96.45
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=2.2e-70  Score=511.53  Aligned_cols=174  Identities=54%  Similarity=1.092  Sum_probs=161.3

Q ss_pred             CCCCCCCcCccCceeecCCCCCC--CCCC-CCCCCcccccCCCCCCccccceeecCCCCCCCCCHHHHHHHhcCCceEEe
Q 026920           57 SLGGGKCNIFQGKWVYDASYPLY--SHCP-FVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFV  133 (231)
Q Consensus        57 ~~~~~~Cd~~~G~WV~D~~~PlY--~tCp-~i~~~~~C~~nGRpD~~y~~WrWqP~gC~Lprfd~~~fL~~lrgkri~FV  133 (231)
                      ..+.++||+|+|+||+|+++|+|  ++|| ||++++||++|||||++|++|||||++|+||||||.+||++|||||||||
T Consensus        47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV  126 (387)
T PLN02629         47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV  126 (387)
T ss_pred             CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence            34567899999999999999999  7999 99999999999999999999999999999999999999999999999999


Q ss_pred             cchhhHHHHHHHHHhhcccCCCceeeEeecCeeEEEEEcccceEEEEEEecceeccccCCCCceEEeccCCC-CCCCCCC
Q 026920          134 GDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKG-GNAWRGM  212 (231)
Q Consensus       134 GDSl~Rnq~~SL~ClL~~~~p~~~~~~~~~~~~~~~~f~~yn~Tv~f~WsPfLv~~~~~~~~~~L~lD~~~~-~~~w~~~  212 (231)
                      ||||+|||||||+|||++++|...+...+.++..+|+|++||+||+||||||||+.+.....++|+||+++. +++|+++
T Consensus       127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~  206 (387)
T PLN02629        127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDA  206 (387)
T ss_pred             ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccC
Confidence            999999999999999999998776666667788999999999999999999999988776677999999974 5899999


Q ss_pred             cEEEEcccccccCCCCCC
Q 026920          213 DMLIFNTWHWWTHTGRSQ  230 (231)
Q Consensus       213 DvlVfntGhWw~~~~~~~  230 (231)
                      |||||||||||.|++..+
T Consensus       207 DvlVfntghWw~~~~~~~  224 (387)
T PLN02629        207 DVLIFNTGHWWSHQGSLQ  224 (387)
T ss_pred             CEEEEeCccccCCCCeeE
Confidence            999999999999986543



>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query231
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 87.24
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 84.69
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 81.23
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=87.24  E-value=0.65  Score=36.79  Aligned_cols=37  Identities=16%  Similarity=0.609  Sum_probs=25.1

Q ss_pred             ccccc--eeecC--CCCCCCCCHHHHHHHhcCCceEEecchhhHHHHHHHHHhhc
Q 026920          100 IYLKY--RWQPF--SCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIH  150 (231)
Q Consensus       100 ~y~~W--rWqP~--gC~Lprfd~~~fL~~lrgkri~FVGDSl~Rnq~~SL~ClL~  150 (231)
                      +|..|  .|-|.  .=++|              ||+|+|||++..-...|...|.
T Consensus         3 ~~~ew~~~~~p~~~~~~~p--------------rVl~iGDSit~G~~~~l~~~l~   43 (200)
T 4h08_A            3 EYIEWSDIWIPGANKTDLP--------------HVLLIGNSITRGYYGKVEAALK   43 (200)
T ss_dssp             SSCCCEEEECTTTTCCSSC--------------EEEEEESHHHHHHHHHHHHHTT
T ss_pred             ceeehhhhccCCcccCCCC--------------eEEEEchhHHhhhHHHHHHHhc
Confidence            67777  47774  34554              6999999999874444555553



>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query231
d3bzwa1 248 Uncharacterized protein BT2961 {Bacteroides thetai 91.89
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 89.21
d1pvva2163 Ornithine transcarbamoylase {Archaeon Pyrococcus f 89.13
d1otha2170 Ornithine transcarbamoylase {Human (Homo sapiens) 87.77
d1dxha2185 Ornithine transcarbamoylase {Pseudomonas aeruginos 80.99
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 80.05
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein BT2961
species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=91.89  E-value=0.024  Score=42.16  Aligned_cols=16  Identities=38%  Similarity=0.808  Sum_probs=13.4

Q ss_pred             hcCCceEEecchhhHH
Q 026920          125 FRGKKIMFVGDSLSLN  140 (231)
Q Consensus       125 lrgkri~FVGDSl~Rn  140 (231)
                      .+||||+|+|||++-.
T Consensus         6 ~~~kkI~~~GDS~T~g   21 (248)
T d3bzwa1           6 WQGKKVGYIGDSITDP   21 (248)
T ss_dssp             TTTCEEEEEESTTTCT
T ss_pred             CCCCEEEEEehHHccC
Confidence            3699999999999753



>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure