Citrus Sinensis ID: 026927

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Protein Sequence
MASSLTKRLDTLNPWLRLAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSWEKVHQIKDKFEYDRERRMKDKGIFSLAERFLYFVNYHFVFYFMLSFLKA
Secondary Structure (PSIPRED)
cccHHHHHHHHHcHHHHHHHHHHHcccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHccEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHccccHHHHHHHHHHccccccccccccccccccccccccccccEEEEcccEEEcccccccccEEEEcccccccHHHHHHHHHHHHHccEEEccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHccccccHHccccccccccccccccccccccccccccccccccHHHHHHHHHcccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MASSLTKRLDTLNPWLRLAQLRFArtesgpprrrskspsfsmtkpnkeksewwivdgemheigdhvpprerfviprdnipnkRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWdegyskklakdhanydsaeeddqdfnpyrsgrkphggdqtrdqgfpsynqgdswekVHQIKDKFEYDRERRMKDKGIFSLAERFLYFVNYHFVFYFMLSFLKA
Flexible Loop (DISEMBL)
massltkrldtlnpwLRLAQLrfartesgpprrrskspsfsmtkpnkeksewWIVDGEMHEigdhvpprerfviprdnipnkrrkqlreqfmrrtrlvlkdsehevFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANydsaeeddqdfnpyrsgrkphggdqtrdqgfpsynqgdswekvhQIKDKFEYDRERRMKDKGIFSLAERFLYFVNYHFVFYFMLSFLKA
Low Complexity Region (SEG)
MASSLTKRLDTLNPWLRLAQLRFARTEsgpprrrskspsfsMTKPNKEKSEWWIVDGEMHEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSWEKVHQIKDKFEYDRERRMKDKGIFSLAERFLYFVNYHFVFYFMLSFLKA
Disordered region (IsUnstruct)
**********TLNPWLRLAQLRF****************************WWIVDGEMHEIGDHVP**ERFVI****************FMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSK*****************************************************I**KFEY*****MKDKGIFSLAERFLYFVNYHFVFYFMLSFL**
Disordered Region (DISOPRED)
*********DTLNPWLRLAQ*******************************WWIVDGEMHEIGDHVPPRE*FV******************MRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLA********************************************WEKVHQIKDKFEYDRERRMKDKGIFSLAERFLYFVNYHFVFYFMLSFLKA
Disordered Region (DISEMBL)
MASSLTKRLDTLNPWLRLAQLRFAR**********************EKSEWWIVDGEMHEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGR********RDQGFPSYNQGDSWEKVHQIKDKFEYDRERRMKDKGIFSLAERFLYFVNYHFVFYFMLSFLKA
Disordered Region (DISPRO)
********LDTLNPWLRLAQLRFAR***********************KSEWWIVDGEMHEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYD******QDF***************************SWEKVHQIKDKFEYDRERRMKDKGIFSLAERFLYFVNYHFVFYFMLSFLKA
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASSLTKRLDTLNPWLRLAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSWEKVHQIKDKFEYDRERRMKDKGIFSLAERFLYFVNYHFVFYFMLSFLKA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	230
297829294	235	hypothetical protein ARALYDRAFT_896908 [	0.869	0.851	0.708	1e-78
15231465	235	uncharacterized protein [Arabidopsis tha	0.869	0.851	0.708	5e-78
224065449	233	predicted protein [Populus trichocarpa]	0.869	0.858	0.719	1e-77
255572630	229	conserved hypothetical protein [Ricinus	0.847	0.851	0.741	5e-77
147845024	266	hypothetical protein VITISV_026468 [Viti	0.917	0.793	0.681	6e-75
145359014	195	uncharacterized protein [Arabidopsis tha	0.826	0.974	0.706	4e-71
26452083	195	unknown protein [Arabidopsis thaliana]	0.826	0.974	0.701	2e-70
357513169	242	hypothetical protein MTR_8g011480 [Medic	0.873	0.830	0.642	9e-66
356504426	230	PREDICTED: uncharacterized protein LOC10	0.847	0.847	0.637	6e-65
449507887	232	PREDICTED: uncharacterized protein LOC10	0.860	0.853	0.635	3e-64

>gi|297829294|ref|XP_002882529.1| hypothetical protein ARALYDRAFT_896908 [Arabidopsis lyrata subsp. lyrata] gi|297328369|gb|EFH58788.1| hypothetical protein ARALYDRAFT_896908 [Arabidopsis lyrata subsp. lyrata]

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 146/206 (70%), Positives = 173/206 (83%), Gaps = 6/206 (2%)

Query: 5   LTKRLDTLNPWLR---LAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHE 61
           + +R+ ++ P +R   ++Q+R ARTE+G PRRR+K PS  + K  +EKSEWWIVDGEMHE
Sbjct: 4   VVRRVGSILPSIRHGAVSQIRLARTEAGQPRRRNKLPSLPLKK-KEEKSEWWIVDGEMHE 62

Query: 62  IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
           IGDHVPPRERF IPRDNIPNKRRKQLREQFMRRTRLVLK+SEHE +CK+YMELY ELREN
Sbjct: 63  IGDHVPPRERFTIPRDNIPNKRRKQLREQFMRRTRLVLKESEHEPWCKKYMELYNELREN 122

Query: 122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSW 181
           WERLYWDEGYSKK+A DHANY+SAEEDD+DFNPYR+ R     DQT++QGF    QGD+W
Sbjct: 123 WERLYWDEGYSKKIASDHANYESAEEDDEDFNPYRNRRS--YSDQTKEQGFNRTTQGDNW 180

Query: 182 EKVHQIKDKFEYDRERRMKDKGIFSL 207
           EKV+QI+DKFEYDRERRM+DK    +
Sbjct: 181 EKVNQIRDKFEYDRERRMRDKAFAPM 206

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231465|ref|NP_187400.1| uncharacterized protein [Arabidopsis thaliana] gi|6041842|gb|AAF02151.1|AC009853_11 unknown protein [Arabidopsis thaliana] gi|27754318|gb|AAO22612.1| unknown protein [Arabidopsis thaliana] gi|28393879|gb|AAO42347.1| unknown protein [Arabidopsis thaliana] gi|332641022|gb|AEE74543.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 146/206 (70%), Positives = 172/206 (83%), Gaps = 6/206 (2%)

Query: 5   LTKRLDTLNPWLR---LAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHE 61
           + +R+ ++ P +R   ++Q+R ARTE+G PRRR+K PS  + K  +EKSEWWIVDGEMHE
Sbjct: 4   VVRRVGSILPSIRHGGVSQIRLARTEAGQPRRRNKLPSLPLKK-KEEKSEWWIVDGEMHE 62

Query: 62  IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
           IGDHVPPRERF IPRDNIPNKRRKQLR+QFMRRTRLVLK+SEHE +CK+YMELY ELREN
Sbjct: 63  IGDHVPPRERFTIPRDNIPNKRRKQLRDQFMRRTRLVLKESEHEPWCKKYMELYNELREN 122

Query: 122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSW 181
           WERLYWDEGYSKKLA DHANY+SAEEDD+DFNPYR+ R     DQT++QGF    QGD+W
Sbjct: 123 WERLYWDEGYSKKLASDHANYESAEEDDEDFNPYRNRRS--FSDQTKEQGFNRTTQGDNW 180

Query: 182 EKVHQIKDKFEYDRERRMKDKGIFSL 207
           EKV QI+DKFEYDRERRM+DK    +
Sbjct: 181 EKVSQIRDKFEYDRERRMRDKAFAPM 206

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065449|ref|XP_002301822.1| predicted protein [Populus trichocarpa] gi|222843548|gb|EEE81095.1| predicted protein [Populus trichocarpa]

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 149/207 (71%), Positives = 172/207 (83%), Gaps = 7/207 (3%)

Query: 3   SSLTKRLDTLNPWLRLA--QLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMH 60
           SSL KRL  L+P L+    QLR  RT +GP RRRSKSP F+  K + EKS+WWIVDGEMH
Sbjct: 2   SSLVKRLHHLSPCLQSTAHQLRQLRTGAGPNRRRSKSPPFAAKKTD-EKSDWWIVDGEMH 60

Query: 61  EIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRE 120
           EIG+HVPPRERFVIPRDN+PNKRRKQLREQFMRRTRLV+K+SEHE +CKRYMELYQELRE
Sbjct: 61  EIGEHVPPRERFVIPRDNVPNKRRKQLREQFMRRTRLVIKESEHEPWCKRYMELYQELRE 120

Query: 121 NWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDS 180
           NWERLYWDEGYSKK+A+DHANY+SAE+DDQDFNPYRS R     +Q +DQ F    QGD+
Sbjct: 121 NWERLYWDEGYSKKIARDHANYESAEDDDQDFNPYRSKRP----EQVKDQDFGRNRQGDT 176

Query: 181 WEKVHQIKDKFEYDRERRMKDKGIFSL 207
           WEKV QI+DKFEYDRE+RM++K    +
Sbjct: 177 WEKVGQIRDKFEYDREKRMREKAFAPM 203

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572630|ref|XP_002527248.1| conserved hypothetical protein [Ricinus communis] gi|223533341|gb|EEF35092.1| conserved hypothetical protein [Ricinus communis]

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 149/201 (74%), Positives = 168/201 (83%), Gaps = 6/201 (2%)

Query: 7   KRLDTLNPWLRLAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHEIGDHV 66
           K L TL+P LRLA   F RT++ P RRRSKSP+F   K + EKSEWWIVDGEMHEIGDHV
Sbjct: 8   KLLQTLSPRLRLAAKDF-RTDASPNRRRSKSPAFQAKKAD-EKSEWWIVDGEMHEIGDHV 65

Query: 67  PPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLY 126
           PPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLK+SEHE +CKRYMELYQELRENWERLY
Sbjct: 66  PPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLY 125

Query: 127 WDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSWEKVHQ 186
           WDEGYSKK+A+DHANY+SAE+DDQDFNPYRS       +Q +DQG     QGD+WEKV Q
Sbjct: 126 WDEGYSKKIAQDHANYESAEDDDQDFNPYRS----RQSEQMKDQGPRRNRQGDTWEKVSQ 181

Query: 187 IKDKFEYDRERRMKDKGIFSL 207
           I+DKFEYDRE+RM++K    +
Sbjct: 182 IRDKFEYDREKRMREKAFAPM 202

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147845024|emb|CAN82702.1| hypothetical protein VITISV_026468 [Vitis vinifera]

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 154/226 (68%), Positives = 180/226 (79%), Gaps = 15/226 (6%)

Query: 5   LTKRLDTLNPWLR--LAQLRFARTESGPP---RRRSKSPSFSMTKPNKEKSEWWIVDGEM 59
           L++RL    P LR  L QLRFART+SG P   RRRSK P+ +M K + EKSEWW+VDGEM
Sbjct: 4   LSRRLQASTPCLRSALLQLRFARTDSGSPVRPRRRSKFPASTMRKVD-EKSEWWVVDGEM 62

Query: 60  HEIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELR 119
           HEIGD+VPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLK+SEHE +CKRYMELYQELR
Sbjct: 63  HEIGDNVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKESEHEPWCKRYMELYQELR 122

Query: 120 ENWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGD 179
           ENWERLYWDEGYSKKLA+DHANY+SAE+DD DF+PYR  R+     Q + Q     +QGD
Sbjct: 123 ENWERLYWDEGYSKKLAQDHANYESAEDDDLDFSPYR--RRWTHDKQIKGQELARNSQGD 180

Query: 180 SWEKVHQIKDKFEYDRERRMKDKG-----IFSLAERFLYFVNYHFV 220
           SWE+V QI+DKFEYDRERRM++K      + SL+E  ++FV   F+
Sbjct: 181 SWERVSQIRDKFEYDRERRMREKVGSHPFMVSLSE--IWFVVDIFL 224

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145359014|ref|NP_199664.2| uncharacterized protein [Arabidopsis thaliana] gi|332008299|gb|AED95682.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 137/194 (70%), Positives = 160/194 (82%), Gaps = 4/194 (2%)

Query: 4   SLTKRLDTLNPWLR--LAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHE 61
           S+ +RL +  P L+   + LRF RTE+  PRRR+K PS S  K  +EKSEWWIVDGEMHE
Sbjct: 3   SVARRLGSATPSLQNGASLLRFMRTEASQPRRRNKFPSLSPLKKKEEKSEWWIVDGEMHE 62

Query: 62  IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
           IGDHVP RERF IPRDNIPNKRRKQLREQFMRRTRLVLK+SEHE +CK+YMELY E+REN
Sbjct: 63  IGDHVPLRERFTIPRDNIPNKRRKQLREQFMRRTRLVLKESEHEPWCKKYMELYNEVREN 122

Query: 122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQG-DS 180
           WERLYWDEGYSKK+A+DHANY+SAEEDD+DFNPYR+ R+P+     ++QGF    QG D+
Sbjct: 123 WERLYWDEGYSKKIARDHANYESAEEDDEDFNPYRN-RRPYNDSIKQEQGFNRTTQGDDN 181

Query: 181 WEKVHQIKDKFEYD 194
           WEKV QI+DKFEYD
Sbjct: 182 WEKVSQIRDKFEYD 195

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26452083|dbj|BAC43131.1| unknown protein [Arabidopsis thaliana]

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 136/194 (70%), Positives = 159/194 (81%), Gaps = 4/194 (2%)

Query: 4   SLTKRLDTLNPWLR--LAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHE 61
           S+ +RL +  P L+   + LRF RTE+  PRRR+K PS S  K  +EKSEWWIVDGEMHE
Sbjct: 3   SVARRLGSATPSLQNGASLLRFMRTEASQPRRRNKFPSLSPLKKKEEKSEWWIVDGEMHE 62

Query: 62  IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
           IGDHVP RERF IPRDNIPNKRRKQLREQFMRRTRLVLK+SEHE +CK+YMELY E+REN
Sbjct: 63  IGDHVPLRERFTIPRDNIPNKRRKQLREQFMRRTRLVLKESEHEPWCKKYMELYNEVREN 122

Query: 122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQG-DS 180
           WERLYWDEGYSKK+A+DHANY+SAEEDD+DFNPYR+ R+P+     ++QGF    QG D+
Sbjct: 123 WERLYWDEGYSKKIARDHANYESAEEDDEDFNPYRN-RRPYNDSIKQEQGFNRTTQGDDN 181

Query: 181 WEKVHQIKDKFEYD 194
           WEKV QI+ KFEYD
Sbjct: 182 WEKVSQIRGKFEYD 195

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357513169|ref|XP_003626873.1| hypothetical protein MTR_8g011480 [Medicago truncatula] gi|355520895|gb|AET01349.1| hypothetical protein MTR_8g011480 [Medicago truncatula]

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 133/207 (64%), Positives = 159/207 (76%), Gaps = 6/207 (2%)

Query: 4   SLTKRLDTLNPWLRLAQLRFARTESGPP---RRRSKSPSFSMTKPNKEKSEWWIVDGEMH 60
           SLTKRL +L P+L     +        P   RRR KS    + KP +E+SEWWIVDGEMH
Sbjct: 3   SLTKRLSSLTPFLSRTSHQLRSPPQPSPTHSRRRPKSTPLPLKKP-EERSEWWIVDGEMH 61

Query: 61  EIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRE 120
           EIGDHVPPRERFVIPR+NIPNKRRKQLREQFMRRTRLVLK+SEH+ +CKRYMELY ELRE
Sbjct: 62  EIGDHVPPRERFVIPRENIPNKRRKQLREQFMRRTRLVLKESEHDPWCKRYMELYNELRE 121

Query: 121 NWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDS 180
           NWERLYWDEG+S KLA+DHANY+SAE+DD+DF+PYR  R+P   +  +D  F    + D+
Sbjct: 122 NWERLYWDEGFSNKLARDHANYESAEDDDEDFSPYR-NRRPQ-MEYNKDLNFVRDRKSDT 179

Query: 181 WEKVHQIKDKFEYDRERRMKDKGIFSL 207
            EKV+ I+DKFEYDRERRM++K    +
Sbjct: 180 LEKVNLIRDKFEYDRERRMREKAFAPM 206

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504426|ref|XP_003520997.1| PREDICTED: uncharacterized protein LOC100798650 [Glycine max]

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 132/207 (63%), Positives = 160/207 (77%), Gaps = 12/207 (5%)

Query: 4   SLTKRLDT---LNPWLRLAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMH 60
           SL KRL       P+L L QLR+ART       R KSP  ++ +  +E+SEWW VDGE+H
Sbjct: 3   SLAKRLQVQPLTTPFL-LGQLRWART-------RPKSPPVALKRA-EERSEWWAVDGEVH 53

Query: 61  EIGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRE 120
           EIGD VP RERFVIPR+NIPNKRRKQLREQFMRRTRLVLK+SEH+ +CK+YMELY ELRE
Sbjct: 54  EIGDLVPLRERFVIPRENIPNKRRKQLREQFMRRTRLVLKESEHDPWCKKYMELYNELRE 113

Query: 121 NWERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDS 180
           NWERLYWDEGY+KKLA+DHANY+SAE+DD DF+PYRS R     + ++DQ F    Q D+
Sbjct: 114 NWERLYWDEGYTKKLAQDHANYESAEDDDGDFSPYRSRRPQSQMEHSKDQNFGRNRQSDN 173

Query: 181 WEKVHQIKDKFEYDRERRMKDKGIFSL 207
           WEKV+ ++DKFEYDRERRM++K    +
Sbjct: 174 WEKVNLLRDKFEYDRERRMREKAFAPM 200

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449507887|ref|XP_004163158.1| PREDICTED: uncharacterized protein LOC101223718 [Cucumis sativus]

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 131/206 (63%), Positives = 158/206 (76%), Gaps = 8/206 (3%)

Query: 4   SLTKRLDTLNPWL--RLAQLRFARTESGPPRRRSKSPSFSMTKPNKEKSEWWIVDGEMHE 61
           SLT R  TL+  L       R  RT++ P RR SK   F++ KP + KSEWW VDGEMHE
Sbjct: 3   SLTHRFRTLSSSLCSNSHPFRSFRTDARPSRRHSKPAPFTVNKP-EHKSEWWAVDGEMHE 61

Query: 62  IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
           IGD+VPPRERF+IPR+N+PN+RRKQLREQFMRRTRLVLK+SEH+ +CK+YMELYQELREN
Sbjct: 62  IGDNVPPRERFIIPRENLPNRRRKQLREQFMRRTRLVLKESEHDPWCKKYMELYQELREN 121

Query: 122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSW 181
           WERLYWDEGYSKKLA+DHANY+SAEE  +DF+PYR+       D+ ++Q F    QG  W
Sbjct: 122 WERLYWDEGYSKKLARDHANYESAEE--EDFSPYRNR---QSTDRNKEQDFRRNMQGGHW 176

Query: 182 EKVHQIKDKFEYDRERRMKDKGIFSL 207
           E V QI+DKFEYDRERRMK++    +
Sbjct: 177 ENVSQIRDKFEYDRERRMKERAFAPM 202

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	230
TAIR|locus:2079671	235	AT3G07440 "AT3G07440" [Arabido	0.847	0.829	0.686	1.2e-72
TAIR|locus:2166081	195	AT5G48530 "AT5G48530" [Arabido	0.826	0.974	0.664	5.1e-67

TAIR|locus:2079671 AT3G07440 "AT3G07440" [Arabidopsis thaliana (taxid:3702)]

 Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
 Identities = 138/201 (68%), Positives = 161/201 (80%)

Query:     5 LTKRLDTLNPWLR---LAQLRFARTEXXXXXXXXXXXXXXMTKPNKEKSEWWIVDGEMHE 61
             + +R+ ++ P +R   ++Q+R ARTE              + K  +EKSEWWIVDGEMHE
Sbjct:     4 VVRRVGSILPSIRHGGVSQIRLARTEAGQPRRRNKLPSLPLKK-KEEKSEWWIVDGEMHE 62

Query:    62 IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
             IGDHVPPRERF IPRDNIPNKRRKQLR+QFMRRTRLVLK+SEHE +CK+YMELY ELREN
Sbjct:    63 IGDHVPPRERFTIPRDNIPNKRRKQLRDQFMRRTRLVLKESEHEPWCKKYMELYNELREN 122

Query:   122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGDSW 181
             WERLYWDEGYSKKLA DHANY+SAEEDD+DFNPYR+ R     DQT++QGF    QGD+W
Sbjct:   123 WERLYWDEGYSKKLASDHANYESAEEDDEDFNPYRNRRS--FSDQTKEQGFNRTTQGDNW 180

Query:   182 EKVHQIKDKFEYDRERRMKDK 202
             EKV QI+DKFEYDRERRM+DK
Sbjct:   181 EKVSQIRDKFEYDRERRMRDK 201

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2166081 AT5G48530 "AT5G48530" [Arabidopsis thaliana (taxid:3702)]

 Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
 Identities = 129/194 (66%), Positives = 150/194 (77%)

Query:     4 SLTKRLDTLNPWLR--LAQLRFARTEXXXXXXXXXXXXXXMTKPNKEKSEWWIVDGEMHE 61
             S+ +RL +  P L+   + LRF RTE                K  +EKSEWWIVDGEMHE
Sbjct:     3 SVARRLGSATPSLQNGASLLRFMRTEASQPRRRNKFPSLSPLKKKEEKSEWWIVDGEMHE 62

Query:    62 IGDHVPPRERFVIPRDNIPNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELREN 121
             IGDHVP RERF IPRDNIPNKRRKQLREQFMRRTRLVLK+SEHE +CK+YMELY E+REN
Sbjct:    63 IGDHVPLRERFTIPRDNIPNKRRKQLREQFMRRTRLVLKESEHEPWCKKYMELYNEVREN 122

Query:   122 WERLYWDEGYSKKLAKDHANYDSAEEDDQDFNPYRSGRKPHGGDQTRDQGFPSYNQGD-S 180
             WERLYWDEGYSKK+A+DHANY+SAEEDD+DFNPYR+ R+P+     ++QGF    QGD +
Sbjct:   123 WERLYWDEGYSKKIARDHANYESAEEDDEDFNPYRN-RRPYNDSIKQEQGFNRTTQGDDN 181

Query:   181 WEKVHQIKDKFEYD 194
             WEKV QI+DKFEYD
Sbjct:   182 WEKVSQIRDKFEYD 195


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.431    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      230       216   0.00088  112 3  11 22  0.36    33
                                                     32  0.50    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  212 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.65u 0.09s 21.74t   Elapsed:  00:00:23
  Total cpu time:  21.65u 0.09s 21.74t   Elapsed:  00:00:23
  Start:  Thu May  9 14:01:15 2013   End:  Thu May  9 14:01:38 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_300878.1 annotation not avaliable (235 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	230
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	8e-04

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 38.2 bits (88), Expect = 8e-04
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 8/69 (11%)

Query: 80  PNKRRKQLREQFMRRTRLVLKDSEHEVFCKRYMELYQELRENWERLYWDEGYSKKLAKDH 139
           P   RK  RE+  +R RL   D+  +       E  ++ +++ E   W++  S+++ K+ 
Sbjct: 84  PESIRKW-REE--QRKRLQELDAASK---VMEQEWREKAKKDLEE--WNQRQSEQVEKNK 135

Query: 140 ANYDSAEED 148
            N   A++ 
Sbjct: 136 INNRIADKA 144

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00