Citrus Sinensis ID: 026937

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Protein Sequence
MQEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYVGAGGACEICALV
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHcccccEEEcccccccccccccccccHHHHHHHccccccEEEEEcccccccccEEccccccccHHHHHccccEEEccHHHHHHHHHccccccccHHHHccccccHHHHHHHHccccccHHHHHHHHccccccEEEEEEcccccEEEcccccccEEEEEEEEEEEEEEccccccccEEEEEcccccEEEEEEc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHcccccEEEEcccccccccHHHccccHHHHHHHHccccEEEEEEccccccccEEccccccccccccEEEccccccccHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHccccccHHHHHHccccccEEEEEccccccccccccccccEEEEEEcEEEEEEccccccccccEEEEcccccEEEEEcc
Coil and Loop (DISEMBL)
MQEVKKLWDEVRelslgsnstierlespptplQFLRDYVsqnkpciiknvslhhqwpafslwphpsylsktlsssppvsvhlspngradslvtlthprsgeisQCFASahverlpfdeALQLVSNSKNGDVVAYLQQQNDcfrdeysvlgsdcDEHIAWATEAlgcypeavnlwignqlsetsfhkdhyenlyTVVSgqkhflllpptdvhrcgtvyvgaggaceicalv
Flexible Loop (DISEMBL)
MQEVKKLWDEVRelslgsnstierlespptPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYVGAGGACEICALV
Low Complexity Region (SEG)
MQEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTlsssppvsvhlspNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYVGAGGACEICALV
Disordered region (IsUnstruct)
*******************************LQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYL********************************EISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYVGAGGACEICAL*
Disordered Region (DISOPRED)
*QEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYVGAGGACEICALV
Disordered Region (DISEMBL)
MQEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLS***********HLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYVGAGGACEICALV
Disordered Region (DISPRO)
MQEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYVGAGGACEICALV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYVGAGGACEICALV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	230	2.2.26 [Sep-21-2011]
P0C870	316	JmjC domain-containing pr	no	no	0.808	0.588	0.4	4e-33
P0C872	316	JmjC domain-containing pr	yes	no	0.782	0.569	0.417	5e-33
Q54CS7	353	JmjC domain-containing pr	yes	no	0.782	0.509	0.371	3e-23
O94606	473	JmjC domain-containing pr	yes	no	0.695	0.338	0.260	3e-05
Q55FB9	286	JmjC domain-containing pr	no	no	0.739	0.594	0.223	0.0002
Q55DF5	448	JmjC domain-containing pr	no	no	0.8	0.410	0.219	0.0003

>sp|P0C870|JMJD7_HUMAN JmjC domain-containing protein 7 OS=Homo sapiens GN=JMJD7 PE=2 SV=1

 Score =  141 bits (356), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 108/205 (52%), Gaps = 19/205 (9%)

Query: 10  EVRELSLGSNS-----TIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPH 64
           E+RE    +        +  L+ PPTPL F RD+V  N+PCII+N   H  WPA   W  
Sbjct: 12  ELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH--WPALQKWSL 69

Query: 65  PSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVS 124
           P Y   T+ S+  VSV ++P+G AD++              F      RLP    L ++ 
Sbjct: 70  P-YFRATVGSTE-VSVAVTPDGYADAVR----------GDRFMMPAERRLPLSFVLDVLE 117

Query: 125 NSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSF 184
                  V Y+Q+Q      E   L  D + H+ WA+EALG  P+AVN W+G   + TS 
Sbjct: 118 GRAQHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSL 177

Query: 185 HKDHYENLYTVVSGQKHFLLLPPTD 209
           HKDHYENLY VVSG+KHFL  PP+D
Sbjct: 178 HKDHYENLYCVVSGEKHFLFHPPSD 202

Homo sapiens (taxid: 9606)

>sp|P0C872|JMJD7_MOUSE JmjC domain-containing protein 7 OS=Mus musculus GN=Jmjd7 PE=2 SV=1

 Score =  140 bits (354), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/194 (41%), Positives = 108/194 (55%), Gaps = 14/194 (7%)

Query: 16  LGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSS 75
           L     +  L+ PP+PL F RD+V  N+PCII+N   H  WPA   W   SYL  T+ S+
Sbjct: 23  LNVPRVVPYLDEPPSPLCFYRDWVCPNRPCIIRNALQH--WPALQKWSL-SYLRATVGST 79

Query: 76  PPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYL 135
             VSV ++P+G AD++              F      RLP    L ++        V Y+
Sbjct: 80  E-VSVAVTPDGYADAVR----------GDRFVMPAERRLPISHVLDVLEGRAQHPGVLYV 128

Query: 136 QQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTV 195
           Q+Q      E   L SD + H+ WA+E+LG  P+AVN W+G+  + TS HKDHYENLY V
Sbjct: 129 QKQCSNLPTELPQLLSDIESHVPWASESLGKMPDAVNFWLGDASAVTSLHKDHYENLYCV 188

Query: 196 VSGQKHFLLLPPTD 209
           VSG+KHFLL PP+D
Sbjct: 189 VSGEKHFLLHPPSD 202

Mus musculus (taxid: 10090)

>sp|Q54CS7|JMJCE_DICDI JmjC domain-containing protein E OS=Dictyostelium discoideum GN=jcdE PE=4 SV=2

 Score =  108 bits (270), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 102/194 (52%), Gaps = 14/194 (7%)

Query: 22  IERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVH 81
           IER+E P T L+F R+YVSQNKP II    L   W A+  W    YL   +     V+V 
Sbjct: 30  IERIEKP-TALEFYREYVSQNKPVII--TGLLENWKAYKEWSD-DYLENVMKDVE-VTVS 84

Query: 82  LSPNGRADSL--VTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGD---VVAYLQ 136
           ++ +G AD++  +    P+S    + F     +++ F E ++    S   +   +  Y+Q
Sbjct: 85  ITNDGLADAVKPINENDPKS---ERVFCKPFEKKIKFQEYIKHSKKSSKENKNKLAYYIQ 141

Query: 137 QQNDCFRDEYSVLGSDCDEH-IAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTV 195
            QN+    EY  L +D DE  I +A EA G   +A N W+G   S +S H+D YEN+Y V
Sbjct: 142 YQNNSLNVEYDKLLNDIDESVIDFAKEAFGSNIDATNFWMGQDKSVSSLHQDPYENMYCV 201

Query: 196 VSGQKHFLLLPPTD 209
           V G K F LLPP D
Sbjct: 202 VRGTKIFTLLPPID 215

Dictyostelium discoideum (taxid: 44689)

>sp|O94606|JMJ4_SCHPO JmjC domain-containing protein 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=jmj4 PE=1 SV=1

 Score = 48.9 bits (115), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 72/192 (37%), Gaps = 32/192 (16%)

Query: 30  TPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRAD 89
           TP  F   +++   P IIK+      W  + LW    YL             LS  G   
Sbjct: 28  TPKDFYDKFIATRTPVIIKSSLPESDWKGY-LWQQQDYL-------------LSKIGDIV 73

Query: 90  SLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFR--DEYS 147
             V    P SG   Q  +      +   E  Q + N +   +     + N+     DE S
Sbjct: 74  CKVEPIDPVSGTFGQGMSR---NEMSIKEFFQKLKNGERLYLTTQYDESNEVLDGDDEVS 130

Query: 148 VL----------GSDCDEHIAWATEALGCYPEAVNLWIGNQLSETS--FHKDHYENLYTV 195
           +L          G   D  I  A       P+  NLWIG   + TS   H D ++N+Y V
Sbjct: 131 LLVKSLCPHPTDGLLTDFSITPALMG-NLVPQQCNLWIGKSENGTSSGLHHDFHDNIYAV 189

Query: 196 VSGQKHFLLLPP 207
           +SG K F+++ P
Sbjct: 190 ISGYKRFVIISP 201

Has a role in meiosis.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q55FB9|JMJCB_DICDI JmjC domain-containing protein B OS=Dictyostelium discoideum GN=jcdB PE=4 SV=1

 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 22/192 (11%)

Query: 22  IERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVH 81
           IER  +     +    Y+++N+P I    S    W A S W  P+YL   + +   V V+
Sbjct: 11  IERNNNKNIEKELFYKYLNENEPIIFTKFST--DWEALSKWNDPNYLINIIGNDHIVDVN 68

Query: 82  -LSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQ--- 137
             S  G    ++ +           F S  +         Q  +   NG+ +  + +   
Sbjct: 69  KCSFGGYYKDIIKIKFSE-------FISKSINN-------QFDNFDLNGNKIKKVNKPYL 114

Query: 138 QNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVS 197
           +N    +++ +   D +  I +  +      +    +IG+  S TSFH D  +NL TV+ 
Sbjct: 115 RNFEMFEDFPIFEQDINCDIIFDKDKHNLIVKRA--FIGSVGSATSFHIDTGDNLVTVIK 172

Query: 198 GQKHFLLLPPTD 209
           G K  +++ P D
Sbjct: 173 GCKFIVMISPND 184

Dictyostelium discoideum (taxid: 44689)

>sp|Q55DF5|JMJCD_DICDI JmjC domain-containing protein D OS=Dictyostelium discoideum GN=jcdD PE=4 SV=1

 Score = 45.8 bits (107), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 85/196 (43%), Gaps = 12/196 (6%)

Query: 16  LGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSL--WPHPSYLSKTLS 73
           L     I+R+  PP+  +F  +Y+ +  PC+I+N  L  +WP F+   W   +YL K ++
Sbjct: 194 LNKEKLIKRISRPPSLNEFKNEYMIKGNPCVIEN--LMKEWPCFNERNWSDLNYL-KNVA 250

Query: 74  SSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVA 133
            S  V + + PN   + +       +  I +   S + +    ++ +  ++ +K  + + 
Sbjct: 251 GSRLVPIEIGPNYLHEKMKQKLINFNKFIDEYIISKNSDDD--NDDIGYLAQTKLFEQIP 308

Query: 134 YLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLY 193
             Q +ND    EY  +   C +      +        +N W+G + + T  H D   N  
Sbjct: 309 --QLRNDILIPEYCKIKIGCGDDDNDNNKEDNV---EINAWLGPKGTVTPLHYDPKHNFL 363

Query: 194 TVVSGQKHFLLLPPTD 209
             + G+K+  L  P +
Sbjct: 364 CQIVGRKYIKLFSPKE 379

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	230
147860088	324	hypothetical protein VITISV_025046 [Viti	0.9	0.638	0.655	4e-74
359474719	374	PREDICTED: jmjC domain-containing protei	0.891	0.548	0.652	1e-72
357484337	351	JmjC domain-containing protein [Medicago	0.891	0.584	0.644	7e-71
356540902	349	PREDICTED: jmjC domain-containing protei	0.869	0.573	0.650	1e-70
224121118	364	predicted protein [Populus trichocarpa]	0.878	0.554	0.704	3e-69
255585385	361	pla2g4b, putative [Ricinus communis] gi|	0.873	0.556	0.698	7e-69
224104511	367	predicted protein [Populus trichocarpa]	0.891	0.558	0.694	2e-68
297819114	345	hypothetical protein ARALYDRAFT_484968 [	0.865	0.576	0.625	2e-67
7339489	431	phospholipase-like protein [Arabidopsis	0.865	0.461	0.601	1e-64
145339161	345	phospholipase - like protein [Arabidopsi	0.865	0.576	0.601	3e-64

>gi|147860088|emb|CAN82929.1| hypothetical protein VITISV_025046 [Vitis vinifera]

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 141/215 (65%), Positives = 166/215 (77%), Gaps = 8/215 (3%)

Query: 1   MQEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFS 60
           M+EV+ LW+EVRELSLG +  +ERLESPPTPL+FLR++VS NKPC+I N +LH  WPA S
Sbjct: 41  MKEVETLWEEVRELSLGKSGRVERLESPPTPLRFLREFVSPNKPCLISNATLH--WPALS 98

Query: 61  LWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEAL 120
            W H  YLS+ LS+   VS+HL+PNGRAD+LV    P +   S CFAS +V RL F EAL
Sbjct: 99  SWSHDDYLSRALSNDV-VSLHLTPNGRADALVPA--PSTSSSSLCFASPYVHRLLFPEAL 155

Query: 121 QLV---SNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGN 177
           +L+    N+ +   VAY QQQNDCFR EYS L +DC+ HI WA++ALGC PEAVNLWIGN
Sbjct: 156 RLILSCGNANSSGTVAYAQQQNDCFRSEYSALAADCEPHIPWASQALGCLPEAVNLWIGN 215

Query: 178 QLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHR 212
            LSETSFHKDHYENLY VV GQKHFLLLPPTDVHR
Sbjct: 216 HLSETSFHKDHYENLYAVVCGQKHFLLLPPTDVHR 250

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474719|ref|XP_002268332.2| PREDICTED: jmjC domain-containing protein 7-like [Vitis vinifera]

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 139/213 (65%), Positives = 164/213 (76%), Gaps = 8/213 (3%)

Query: 3   EVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLW 62
           +V+ LW+EVRELSLG +  +ERLESPPTPL+FLR++VS NKPC+I N +LH  WPA S W
Sbjct: 6   QVETLWEEVRELSLGKSGRVERLESPPTPLRFLREFVSPNKPCLISNATLH--WPALSSW 63

Query: 63  PHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQL 122
            H  YLS+ LS+   VS+HL+PNGRAD+LV    P +   S CFAS +V RL F EAL+L
Sbjct: 64  SHDDYLSRALSNDV-VSLHLTPNGRADALVPA--PSTSSSSLCFASPYVHRLLFPEALRL 120

Query: 123 V---SNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQL 179
           +    N+ +   VAY QQQNDCFR EYS L +DC+ HI WA++ALGC PEAVNLWIGN L
Sbjct: 121 ILSCGNANSSGTVAYAQQQNDCFRSEYSALAADCEPHIPWASQALGCLPEAVNLWIGNHL 180

Query: 180 SETSFHKDHYENLYTVVSGQKHFLLLPPTDVHR 212
           SETSFHKDHYENLY VV GQKHFLLLPPTDVHR
Sbjct: 181 SETSFHKDHYENLYAVVCGQKHFLLLPPTDVHR 213

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357484337|ref|XP_003612456.1| JmjC domain-containing protein [Medicago truncatula] gi|355513791|gb|AES95414.1| JmjC domain-containing protein [Medicago truncatula]

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 136/211 (64%), Positives = 162/211 (76%), Gaps = 6/211 (2%)

Query: 2   QEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSL 61
           +++++LW EVRELSLGS  +IERLES PTPLQF R++++ NKPCII N   H  WP+ SL
Sbjct: 3   EKIEELWREVRELSLGSKRSIERLESAPTPLQFHRNFITPNKPCIISNSISH--WPSLSL 60

Query: 62  WPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQ 121
           W HPSYL+++LSS+  VS+HL+P G ADSL  L    S   S CFASAHV+ LPF EAL+
Sbjct: 61  WSHPSYLTQSLSSTT-VSLHLTPTGSADSLTPLP---SSPSSLCFASAHVQNLPFPEALR 116

Query: 122 LVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSE 181
           L+++S     VAY QQQNDCFR EY  +  DCD+HIAWATEA G  PEAVNLWIGN+ S 
Sbjct: 117 LINSSNPSQCVAYAQQQNDCFRSEYDSIVKDCDQHIAWATEAFGLEPEAVNLWIGNKHSS 176

Query: 182 TSFHKDHYENLYTVVSGQKHFLLLPPTDVHR 212
           T FHKDHYENLY VV+GQKHFLL PPTDVHR
Sbjct: 177 TWFHKDHYENLYAVVTGQKHFLLFPPTDVHR 207

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540902|ref|XP_003538923.1| PREDICTED: jmjC domain-containing protein 7-like [Glycine max]

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 136/209 (65%), Positives = 161/209 (77%), Gaps = 9/209 (4%)

Query: 4   VKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWP 63
           +++LW EVR+LSLG+   +ERLESPPTP+QFLRD+++ NKPCII N   H  WPA S W 
Sbjct: 7   IEELWREVRDLSLGNGGRVERLESPPTPVQFLRDFITPNKPCIISNAITH--WPALSSWT 64

Query: 64  HPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLV 123
           +PS+LS++LS +  VSVHL+P G AD+L  L   RS   S CFASAHV+R+PF  AL L+
Sbjct: 65  NPSHLSQSLSGAT-VSVHLTPTGAADALAPL---RS---SLCFASAHVQRVPFPHALDLI 117

Query: 124 SNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETS 183
           S S+   +VAY QQQNDCFR EYS L  DCD H  WATEA+G  PEAVNLWIGNQ S TS
Sbjct: 118 SFSEPSKLVAYAQQQNDCFRSEYSSLADDCDPHFGWATEAIGSEPEAVNLWIGNQHSRTS 177

Query: 184 FHKDHYENLYTVVSGQKHFLLLPPTDVHR 212
           FHKDHYENLY VV+G+KHFLLLPPTDVHR
Sbjct: 178 FHKDHYENLYAVVTGEKHFLLLPPTDVHR 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121118|ref|XP_002330908.1| predicted protein [Populus trichocarpa] gi|222872730|gb|EEF09861.1| predicted protein [Populus trichocarpa]

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 148/210 (70%), Positives = 168/210 (80%), Gaps = 8/210 (3%)

Query: 4   VKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWP 63
           ++ LW EVRELSLG+   I+RL+S PTPLQFLRD+VS NKPCII N   H  WPA + WP
Sbjct: 9   LEGLWGEVRELSLGNR--IQRLDSAPTPLQFLRDFVSPNKPCIISNAISH--WPALTRWP 64

Query: 64  HPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLV 123
             SYLS TLS+S  VS+HL+P+GRADSLV L +P+  EI  CFASAHVER+PF  AL LV
Sbjct: 65  SLSYLSSTLSNSI-VSLHLTPDGRADSLVPLENPKKEEI--CFASAHVERVPFPCALDLV 121

Query: 124 SNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCY-PEAVNLWIGNQLSET 182
            N +  ++VAYLQQQNDCFR+EYS L SDCD HI WATEALG Y PEAVNLWIGN LSET
Sbjct: 122 LNPERKNLVAYLQQQNDCFREEYSALASDCDAHIPWATEALGGYLPEAVNLWIGNHLSET 181

Query: 183 SFHKDHYENLYTVVSGQKHFLLLPPTDVHR 212
           SFHKDHYENLY VVSG+K FLLLPPTD+HR
Sbjct: 182 SFHKDHYENLYAVVSGEKQFLLLPPTDMHR 211

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585385|ref|XP_002533388.1| pla2g4b, putative [Ricinus communis] gi|223526762|gb|EEF28988.1| pla2g4b, putative [Ricinus communis]

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 148/212 (69%), Positives = 165/212 (77%), Gaps = 11/212 (5%)

Query: 2   QEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSL 61
            ++K LWDEVRELSL +  TIERL+SPPTPL+FLR+YVS NKPCII N   H  WPA SL
Sbjct: 5   NQIKSLWDEVRELSLST--TIERLDSPPTPLEFLRNYVSPNKPCIISNAISH--WPALSL 60

Query: 62  WPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQ 121
           WP+ SYL+ +LS S  VS+HL+P+GRADSLV      +   S CFASAHV+ LPF  A+ 
Sbjct: 61  WPNHSYLTHSLSHSS-VSLHLTPHGRADSLVP-----TPTNSLCFASAHVKSLPFPLAVN 114

Query: 122 LVSNSKNGDVVAYLQQQNDCFRDEY-SVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLS 180
            V NS+ G  VAYLQQQNDCFR EY   LGSDCD HI WATEA GC PEAVNLWIGN LS
Sbjct: 115 WVLNSQVGKSVAYLQQQNDCFRTEYFDALGSDCDGHIEWATEAFGCLPEAVNLWIGNHLS 174

Query: 181 ETSFHKDHYENLYTVVSGQKHFLLLPPTDVHR 212
           ETSFHKDHYENLY VVSG+KHFLLLPPTDVHR
Sbjct: 175 ETSFHKDHYENLYAVVSGEKHFLLLPPTDVHR 206

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104511|ref|XP_002313461.1| predicted protein [Populus trichocarpa] gi|222849869|gb|EEE87416.1| predicted protein [Populus trichocarpa]

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/213 (69%), Positives = 168/213 (78%), Gaps = 8/213 (3%)

Query: 1   MQEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFS 60
           ++ ++ LW +VRELSLG+   I+RL+  PTPLQFLRDYVS NKPCII N   H  WPA S
Sbjct: 5   VRALEGLWGDVRELSLGNR--IQRLDLAPTPLQFLRDYVSPNKPCIISNAISH--WPALS 60

Query: 61  LWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEAL 120
           LWP+ SYLS +LS S  VS+HL+P+GRADSLV L  P+ GE   CFASAHVE +PF  AL
Sbjct: 61  LWPNLSYLSSSLSDST-VSLHLTPDGRADSLVPLETPKKGET--CFASAHVEHVPFPCAL 117

Query: 121 QLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEAL-GCYPEAVNLWIGNQL 179
            LV NS+  +VV YLQQQNDCF++EYSVL SDCD HI WATEAL GC PEAVNLWIGN  
Sbjct: 118 DLVLNSERNNVVGYLQQQNDCFQEEYSVLASDCDAHIPWATEALGGCLPEAVNLWIGNHS 177

Query: 180 SETSFHKDHYENLYTVVSGQKHFLLLPPTDVHR 212
           SETSFHKDHYENLY VVSG+K FLLLPPTDVHR
Sbjct: 178 SETSFHKDHYENLYAVVSGEKQFLLLPPTDVHR 210

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297819114|ref|XP_002877440.1| hypothetical protein ARALYDRAFT_484968 [Arabidopsis lyrata subsp. lyrata] gi|297323278|gb|EFH53699.1| hypothetical protein ARALYDRAFT_484968 [Arabidopsis lyrata subsp. lyrata]

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 132/211 (62%), Positives = 158/211 (74%), Gaps = 12/211 (5%)

Query: 2   QEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSL 61
           +E++ LW EVRELSLG+   I+RL+SPP+P++FLRDYVSQ+KPC+I N   H  WPA  L
Sbjct: 3   KEIQNLWREVRELSLGTK--IDRLDSPPSPVKFLRDYVSQSKPCVISNAISH--WPALKL 58

Query: 62  WPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQ 121
           W  P+YLS  LS+   VS+HL+PNG AD++       +G+   CFASAHVE++ F EAL+
Sbjct: 59  WSDPAYLSGALSNDF-VSLHLTPNGCADAV-------TGDRDLCFASAHVEKVLFPEALE 110

Query: 122 LVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSE 181
            V +S  G  V YLQQQNDCFR EYS +  DCD  IAWATEA GC PEAVNLWIG   S 
Sbjct: 111 AVQSSCKGQKVGYLQQQNDCFRTEYSTVALDCDGEIAWATEAFGCSPEAVNLWIGTDDSV 170

Query: 182 TSFHKDHYENLYTVVSGQKHFLLLPPTDVHR 212
           TSFHKDHYENLY VVSG+KHF+LLPPTDVHR
Sbjct: 171 TSFHKDHYENLYAVVSGEKHFILLPPTDVHR 201

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7339489|emb|CAB82812.1| phospholipase-like protein [Arabidopsis thaliana]

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 127/211 (60%), Positives = 154/211 (72%), Gaps = 12/211 (5%)

Query: 2   QEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSL 61
           +E++ LW EVRELSLG+   I+R +S P+P++FLR+YVSQ+KPC+I     H  WPA  L
Sbjct: 3   KEIENLWREVRELSLGTK--IDRFDSQPSPVKFLRNYVSQSKPCVISKAITH--WPALKL 58

Query: 62  WPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQ 121
           W  P+YL+  LS    VS+HL+PNG AD++       +G+   CFASAHVE++ F EAL+
Sbjct: 59  WSDPAYLTGALSDDV-VSLHLTPNGCADAV-------TGDSDLCFASAHVEKVLFPEALK 110

Query: 122 LVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSE 181
           +V +S  G  V YLQQQNDCFR EYS +  DCD  I WATEA GC PEAVNLWIG   S 
Sbjct: 111 VVQSSCKGLKVGYLQQQNDCFRTEYSTVALDCDGDIEWATEAFGCSPEAVNLWIGTDDSV 170

Query: 182 TSFHKDHYENLYTVVSGQKHFLLLPPTDVHR 212
           TSFHKDHYENLY VVSG+KHFLLLPPTDVHR
Sbjct: 171 TSFHKDHYENLYAVVSGEKHFLLLPPTDVHR 201

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145339161|ref|NP_190174.2| phospholipase - like protein [Arabidopsis thaliana] gi|110741676|dbj|BAE98784.1| phospholipase - like protein [Arabidopsis thaliana] gi|332644565|gb|AEE78086.1| phospholipase - like protein [Arabidopsis thaliana]

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 127/211 (60%), Positives = 154/211 (72%), Gaps = 12/211 (5%)

Query: 2   QEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSL 61
           +E++ LW EVRELSLG+   I+R +S P+P++FLR+YVSQ+KPC+I     H  WPA  L
Sbjct: 3   KEIENLWREVRELSLGTK--IDRFDSQPSPVKFLRNYVSQSKPCVISKAITH--WPALKL 58

Query: 62  WPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQ 121
           W  P+YL+  LS    VS+HL+PNG AD++       +G+   CFASAHVE++ F EAL+
Sbjct: 59  WSDPAYLTGALSDDV-VSLHLTPNGCADAV-------TGDSDLCFASAHVEKVLFPEALK 110

Query: 122 LVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSE 181
           +V +S  G  V YLQQQNDCFR EYS +  DCD  I WATEA GC PEAVNLWIG   S 
Sbjct: 111 VVQSSCKGLKVGYLQQQNDCFRTEYSTVALDCDGDIEWATEAFGCSPEAVNLWIGTDDSV 170

Query: 182 TSFHKDHYENLYTVVSGQKHFLLLPPTDVHR 212
           TSFHKDHYENLY VVSG+KHFLLLPPTDVHR
Sbjct: 171 TSFHKDHYENLYAVVSGEKHFLLLPPTDVHR 201

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	230
TAIR|locus:2077172	345	AT3G45880 [Arabidopsis thalian	0.865	0.576	0.568	9.3e-59
ZFIN|ZDB-GENE-050417-86	311	jmjd7 "jumonji domain containi	0.839	0.620	0.408	7.4e-34
UNIPROTKB|E1BWG9	1028	E1BWG9 "Uncharacterized protei	0.782	0.175	0.391	4e-29
DICTYBASE|DDB_G0292770	353	jcdE "transcription factor jum	0.843	0.549	0.352	1.4e-23
FB|FBgn0036366	316	CG10133 [Drosophila melanogast	0.834	0.607	0.325	7e-22
POMBASE|SPCC622.19	473	jmj4 "Jmj4 protein (predicted)	0.173	0.084	0.428	0.00011
DICTYBASE|DDB_G0270906	448	jcdD "transcription factor jum	0.234	0.120	0.327	0.0004
GENEDB_PFALCIPARUM|PF11_0230	446	PF11_0230 "hypothetical protei	0.495	0.255	0.233	0.00041
UNIPROTKB|Q8IIE4	446	PF11_0230 "Conserved Plasmodiu	0.495	0.255	0.233	0.00041

TAIR|locus:2077172 AT3G45880 [Arabidopsis thaliana (taxid:3702)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 120/211 (56%), Positives = 145/211 (68%)

Query:     2 QEVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSL 61
             +E++ LW EVRELSLG+   I+R +S P+P++FLR+YVSQ+KPC+I     H  WPA  L
Sbjct:     3 KEIENLWREVRELSLGTK--IDRFDSQPSPVKFLRNYVSQSKPCVISKAITH--WPALKL 58

Query:    62 WPHPSYLSKTXXXXXXXXXXXXXNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQ 121
             W  P+YL+               NG AD++       +G+   CFASAHVE++ F EAL+
Sbjct:    59 WSDPAYLTGALSDDVVSLHLTP-NGCADAV-------TGDSDLCFASAHVEKVLFPEALK 110

Query:   122 LVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSE 181
             +V +S  G  V YLQQQNDCFR EYS +  DCD  I WATEA GC PEAVNLWIG   S 
Sbjct:   111 VVQSSCKGLKVGYLQQQNDCFRTEYSTVALDCDGDIEWATEAFGCSPEAVNLWIGTDDSV 170

Query:   182 TSFHKDHYENLYTVVSGQKHFLLLPPTDVHR 212
             TSFHKDHYENLY VVSG+KHFLLLPPTDVHR
Sbjct:   171 TSFHKDHYENLYAVVSGEKHFLLLPPTDVHR 201

GO:0005737 "cytoplasm" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

ZFIN|ZDB-GENE-050417-86 jmjd7 "jumonji domain containing 7" [Danio rerio (taxid:7955)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 87/213 (40%), Positives = 114/213 (53%)

Query:     1 MQEVKK-LWD---EVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQW 56
             M EVK+ L D   E REL L  N  +  L+ P +PLQF RD++  NKPCII+N    + W
Sbjct:     1 MDEVKECLRDFPKEARELYL--NDAVPYLDEPLSPLQFYRDWIGPNKPCIIRNA--FNDW 56

Query:    57 PAFSLWPHPSYLSKTXXXXXXXXXXXXXNGRADSLVTLTHPRSGEISQCFASAHVERLPF 116
             PA S W +P+YL +              NG AD++       +G     F      ++ F
Sbjct:    57 PALSKW-NPTYL-REKVGSKVISVAVTPNGFADAV-------NGNR---FVMPEERQMSF 104

Query:   117 DEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIG 176
                L +V        V Y+Q+Q     +E   L  D   HI W +EALG  P+AVN W+G
Sbjct:   105 SSLLDIVEGKIKSSAVFYVQKQCSNLMEEIPELTGDVQTHIPWMSEALGKLPDAVNFWLG 164

Query:   177 NQLSETSFHKDHYENLYTVVSGQKHFLLLPPTD 209
              + + TS HKDHYENLY V+SGQK F+LLPPTD
Sbjct:   165 EESAVTSMHKDHYENLYCVISGQKEFILLPPTD 197

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|E1BWG9 E1BWG9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 335 (123.0 bits), Expect = 4.0e-29, P = 4.0e-29
 Identities = 76/194 (39%), Positives = 103/194 (53%)

Query:    16 LGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTXXXX 75
             LG   ++  L+ PP+PL+F R++VS NKPCII+N   H  WPA   W   +YL +     
Sbjct:    27 LGCVESVPYLDRPPSPLEFYREWVSPNKPCIIRNAIGH--WPALRKWTL-AYLREVVGHK 83

Query:    76 XXXXXXXXXNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYL 135
                      NG AD++    H R       F      ++PF + L +V        V Y+
Sbjct:    84 VVSVAVTP-NGYADAVF---HDR-------FVMPEERQMPFMDFLDIVEKKVTSPSVFYV 132

Query:   136 QQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTV 195
             Q+Q     +E+  L  D    I W +EALG  P+AVN W+G   + TS HKDHYENLY V
Sbjct:   133 QKQCSNLTEEFPELICDVQPDIPWMSEALGKKPDAVNFWLGESAAVTSLHKDHYENLYCV 192

Query:   196 VSGQKHFLLLPPTD 209
             +SG+K FLL PP+D
Sbjct:   193 ISGEKRFLLHPPSD 206

GO:0004620 "phospholipase activity" evidence=IEA

GO:0009395 "phospholipid catabolic process" evidence=IEA

DICTYBASE|DDB_G0292770 jcdE "transcription factor jumonji, jmjC domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 74/210 (35%), Positives = 107/210 (50%)

Query:     6 KLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHP 65
             KL  E ++  +  +  IER+E P T L+F R+YVSQNKP II    L   W A+  W   
Sbjct:    16 KLCQEAQDFLIIKD--IERIEKP-TALEFYREYVSQNKPVII--TGLLENWKAYKEWSD- 69

Query:    66 SYLSKTXXXXXXXXXXXXXNGRADSLVTLTH--PRSGEISQCFASAHVERLPFDEALQ-- 121
              YL                +G AD++  +    P+S  +   F     +++ F E ++  
Sbjct:    70 DYLENVMKDVEVTVSITN-DGLADAVKPINENDPKSERV---FCKPFEKKIKFQEYIKHS 125

Query:   122 LVSNSKNGDVVAY-LQQQNDCFRDEYSVLGSDCDEHIA-WATEALGCYPEAVNLWIGNQL 179
               S+ +N + +AY +Q QN+    EY  L +D DE +  +A EA G   +A N W+G   
Sbjct:   126 KKSSKENKNKLAYYIQYQNNSLNVEYDKLLNDIDESVIDFAKEAFGSNIDATNFWMGQDK 185

Query:   180 SETSFHKDHYENLYTVVSGQKHFLLLPPTD 209
             S +S H+D YEN+Y VV G K F LLPP D
Sbjct:   186 SVSSLHQDPYENMYCVVRGTKIFTLLPPID 215

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0036366 CG10133 [Drosophila melanogaster (taxid:7227)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 69/212 (32%), Positives = 111/212 (52%)

Query:     1 MQEVKKLWD----EVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQW 56
             M EV++  D    E  EL +GS S +E L+  PT L+F R++ S+N+P +I+  +L+  W
Sbjct:     1 MSEVERALDVLLQEAEELCIGS-SVVE-LDRIPTALEFCREFYSKNQPVVIRK-ALN--W 55

Query:    57 PAFSLWPHPSYLSKTXXXXXXXXXXXXXNGRADSLVTLTHPRSGEISQCFASAHVERLPF 116
             PA   W  P YL +              NG AD L T    ++G+  + F      ++  
Sbjct:    56 PAIGKWT-PKYLIEALGDRSVDVAITP-NGYADGLAT----QNGQ--EYFVLPLETKMKL 107

Query:   117 DEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCD-EHIAWATEALGCYPEAVNLWI 175
              E ++ + +      V Y+Q+QN     +   L +D     + +A ++    P+AVN W+
Sbjct:   108 SEVVRRLDDPTGA--VHYIQKQNSNLSVDLPELAADLRVSDLDFAQQSFNKPPDAVNFWL 165

Query:   176 GNQLSETSFHKDHYENLYTVVSGQKHFLLLPP 207
             G++ + TS HKD YEN+Y V+SG K F+L+PP
Sbjct:   166 GDERAVTSMHKDPYENVYCVISGHKDFVLIPP 197

GO:0004623 "phospholipase A2 activity" evidence=ISS

POMBASE|SPCC622.19 jmj4 "Jmj4 protein (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 101 (40.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 18/42 (42%), Positives = 27/42 (64%)

Query:   168 PEAVNLWIGNQLSETS--FHKDHYENLYTVVSGQKHFLLLPP 207
             P+  NLWIG   + TS   H D ++N+Y V+SG K F+++ P
Sbjct:   160 PQQCNLWIGKSENGTSSGLHHDFHDNIYAVISGYKRFVIISP 201

GO:0000790 "nuclear chromatin" evidence=ISM

GO:0005634 "nucleus" evidence=IDA

GO:0006338 "chromatin remodeling" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISM

GO:0016577 "histone demethylation" evidence=ISM

GO:0032452 "histone demethylase activity" evidence=ISM

DICTYBASE|DDB_G0270906 jcdD "transcription factor jumonji, jmjC domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 94 (38.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
 Identities = 19/58 (32%), Positives = 32/58 (55%)

Query:    13 ELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSL--WPHPSYL 68
             E+ L     I+R+  PP+  +F  +Y+ +  PC+I+N  L  +WP F+   W   +YL
Sbjct:   191 EIILNKEKLIKRISRPPSLNEFKNEYMIKGNPCVIEN--LMKEWPCFNERNWSDLNYL 246

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GENEDB_PFALCIPARUM|PF11_0230 PF11_0230 "hypothetical protein" [Plasmodium falciparum (taxid:5833)]

 Score = 93 (37.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
 Identities = 28/120 (23%), Positives = 55/120 (45%)

Query:   102 ISQCFASAHVERLPFDEALQLVS--NSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAW 159
             IS  F +   +++ F + L L+   N K      Y+++     +D  + +      ++  
Sbjct:    77 ISNSFGTGEKKKMKFHKFLSLLEKGNKKYYLNTQYVKENAYHPKDFCNSITRQMINYLPK 136

Query:   160 ATEALGCYP-EAVNLWIGNQLS---ETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGT 215
               E +G       N+W+GN  S   +T  H D+++N+Y ++ G+K F +  P   +R  T
Sbjct:   137 ELEIMGNLEIYQYNIWLGNNKSTKLKTYLHHDYHDNIYVLLKGKKTFRIYSPNFAYRLKT 196

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0020011 "apicoplast" evidence=RCA

UNIPROTKB|Q8IIE4 PF11_0230 "Conserved Plasmodium protein" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 93 (37.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
 Identities = 28/120 (23%), Positives = 55/120 (45%)

Query:   102 ISQCFASAHVERLPFDEALQLVS--NSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAW 159
             IS  F +   +++ F + L L+   N K      Y+++     +D  + +      ++  
Sbjct:    77 ISNSFGTGEKKKMKFHKFLSLLEKGNKKYYLNTQYVKENAYHPKDFCNSITRQMINYLPK 136

Query:   160 ATEALGCYP-EAVNLWIGNQLS---ETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGT 215
               E +G       N+W+GN  S   +T  H D+++N+Y ++ G+K F +  P   +R  T
Sbjct:   137 ELEIMGNLEIYQYNIWLGNNKSTKLKTYLHHDYHDNIYVLLKGKKTFRIYSPNFAYRLKT 196

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0020011 "apicoplast" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00001159001 SubName- Full=Chromosome chr2 scaffold_113, whole genome shotgun sequence; (371 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	230
pfam13621	247	pfam13621, Cupin_8, Cupin-like domain	2e-49

>gnl|CDD|222269 pfam13621, Cupin_8, Cupin-like domain

 Score =  161 bits (410), Expect = 2e-49
 Identities = 68/190 (35%), Positives = 91/190 (47%), Gaps = 16/190 (8%)

Query: 31  PLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLW-PHPSYLSKTLSSSPPVSVHLSPNGRAD 89
           P +F R+YV++ KP ++K  +    WPA   W     YL +       VSV ++P GRAD
Sbjct: 1   PEEFFREYVAKRKPVVLKGAAKD--WPAVKKWTDALDYLKEKYGDVE-VSVEVTPPGRAD 57

Query: 90  SLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVL 149
                             +   ER+PF + L L+    + +   YL  Q+     E+   
Sbjct: 58  RFFYND-------DLSGVNFKEERMPFKDFLDLLRAGSDQETPPYLYLQSSNLDSEFP-- 108

Query: 150 GSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTD 209
           G   D  +  A EA G  P+AVNLWIGN  + TS H D YENLY VVSG+K F L PP+ 
Sbjct: 109 GLREDNDLPLAPEAFGKLPQAVNLWIGNGGTTTSLHYDAYENLYCVVSGRKRFTLFPPSQ 168

Query: 210 VHRCGTVYVG 219
           V      Y G
Sbjct: 169 VPNL---YPG 175

This cupin like domain shares similarity to the JmjC domain. Length = 247

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	230
KOG2508	437	consensus Predicted phospholipase [Lipid transport	100.0
PF13621	251	Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XU	99.98
KOG2130	407	consensus Phosphatidylserine-specific receptor Ptd	99.93
KOG2132	355	consensus Uncharacterized conserved protein, conta	99.92
KOG2131	427	consensus Uncharacterized conserved protein, conta	99.31
COG2850	383	Uncharacterized conserved protein [Function unknow	98.37
PF08007	319	Cupin_4: Cupin superfamily protein; InterPro: IPR0	97.73
smart00558	57	JmjC A domain family that is part of the cupin met	97.05
KOG3706	629	consensus Uncharacterized conserved protein [Funct	96.73
PF02373	114	JmjC: JmjC domain, hydroxylase; InterPro: IPR01312	94.64
KOG1633	776	consensus F-box protein JEMMA and related proteins	84.2
KOG1356	889	consensus Putative transcription factor 5qNCA, con	81.41

>KOG2508 consensus Predicted phospholipase [Lipid transport and metabolism]

Probab=100.00  E-value=1.8e-40  Score=283.95  Aligned_cols=205  Identities=41%  Similarity=0.704  Sum_probs=185.0

Q ss_pred             HHHHHHHHhhhccCCCCCcceeecCCCCHHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCCCCEEEEe
Q 026937            3 EVKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHL   82 (230)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~I~ri~~~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~~   82 (230)
                      +++-+++|.|||++|.  .|.+++..+|+-+|+++|+.+|+||||+.+..  +|||+++|+..+||.+++||. .|.|++
T Consensus         7 e~~~llre~relcvp~--~v~~lD~~Ptpl~Fyr~fvs~n~PvIIrkAL~--hWpal~lWs~p~Yl~~algd~-vvsvai   81 (437)
T KOG2508|consen    7 EYKGLLREVRELCVPV--LVNLLDLTPTPLDFYRKFVSTNTPVIIRKALP--HWPALKLWSQPDYLLSALGDI-VVSVAI   81 (437)
T ss_pred             HHHhhhHHHhhccccc--ccccccCCCchHHHHHhhhcCCCcEEEecccc--cCchhhccCchHHHHHhccCe-EEEEEe
Confidence            4677999999999997  99999988999999999999999999999999  999999999978999999999 999999


Q ss_pred             ccCCCCC-cccccCCCCCCccccccccceEEEecHHHHHHHHHcCCCCccccccccccccccccchhhhccccc-chhhh
Q 026937           83 SPNGRAD-SLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDE-HIAWA  160 (230)
Q Consensus        83 ~~~g~~d-~~~~~~~~~~~~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~~~L~~Di~~-~~p~~  160 (230)
                      +|+|..| +.++.        ...|.....++|+++|-+..+.....++...|+++++++|+.++|+|..|+.. +++|+
T Consensus        82 tPngyadgav~~g--------~e~f~~pae~KlklsevL~vl~~~~~~~~Vly~qkQ~snl~~elp~la~Dl~~~d~~wa  153 (437)
T KOG2508|consen   82 TPNGYADGAVMSG--------NEMFIKPAEQKLKLSEVLYVLTQYDESNEVLYGQKQNSNLVKELPPLATDLLLTDFSWA  153 (437)
T ss_pred             CCCCccccccccC--------cceeechhhhhccchhhheehhcccCCCceeehhhhccccccccccccccccccccccc
Confidence            9999887 44432        23455556669999999999998877778999999999999999999999986 89999


Q ss_pred             hhhhCCCCCccEEEeeCCCCCCCccccCCCceEEEEEeEeEEEEeCCCCCCCCcceecCC
Q 026937          161 TEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYVGA  220 (230)
Q Consensus       161 ~~~~~~~~~~~~lwiG~~gt~T~lH~D~~~N~~~qi~G~Kr~~LfpP~~~~~LY~~~~~~  220 (230)
                      +++||+.|++.|+|||...++|.||.|+|+|++|+|.|.|+|+|.||++.+.|+.....+
T Consensus       154 ~eafgk~PdavNlWiG~~~avTSlHkDhyENlYaViSGeKhFvlipP~d~~~lp~eiyp~  213 (437)
T KOG2508|consen  154 PEAFGKVPDAVNLWIGKSEAVTSLHKDHYENLYAVISGEKHFVLIPPDDANQLPLEIYPN  213 (437)
T ss_pred             HHHhCCChhheeeeecccccccccccccccceEEEEeccceEEEeCcccccccceeecCC
Confidence            999999999999999999999999999999999999999999999999999887544433

>PF13621 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XUM_A 2Y0I_A 1MZE_A 3KCY_A 1MZF_A 1YCI_A 2ILM_A 1H2L_A

Probab=99.98  E-value=1.4e-32  Score=231.87  Aligned_cols=174  Identities=32%  Similarity=0.552  Sum_probs=131.7

Q ss_pred             HHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCC----hhhHHHHcCCCCCEEEEeccCCCCCcccccCCCCCCcccccc
Q 026937           31 PLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPH----PSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCF  106 (230)
Q Consensus        31 ~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~----~eyL~~~~G~~~~V~v~~~~~g~~d~~~~~~~~~~~~~~~~f  106 (230)
                      |++|+++|+.+++||||+|++.  +|+|+++|+.    .+||++++|+. .|.|....++..+.....       ....+
T Consensus         1 p~eF~~~~~~~~~PvVi~g~~~--~w~a~~~W~~~~~~~~~l~~~~g~~-~v~~~~~~~~~~~~~~~~-------~~~~~   70 (251)
T PF13621_consen    1 PEEFFERYVKPNKPVVIRGAAA--DWPAFQKWTDDEYLLDYLKEKYGDV-PVPVRDSPNGISDSFGYN-------DDRKF   70 (251)
T ss_dssp             -HHHHHHTCCTT--EEEESSST--TCCHHHH-S-----HHHHHHHHTSS-EEEEEEEST--SSBTS-B--------GCCC
T ss_pred             CHHHHHHHhCCCCCEEEeCCcc--CCchhhhccchhHHHHHHHHHcCCe-EEEEEecCCccccccccc-------ccccc
Confidence            6899999999999999999999  9999999995    59999999999 999986553322221100       01223


Q ss_pred             ccceEEEecHHHHHHHHHcCCCC--ccccccccccccccccchhhhcccccchhhhhhhhCCCCCccEEEeeCCCCCCCc
Q 026937          107 ASAHVERLPFDEALQLVSNSKNG--DVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSF  184 (230)
Q Consensus       107 ~~~~~~~m~~~efl~~~~~~~~~--~~~~Yl~~~~~~l~~~~~~L~~Di~~~~p~~~~~~~~~~~~~~lwiG~~gt~T~l  184 (230)
                      .......|+|++|++.+......  ...+|+..  ..+..++|.|.+|.  .+||.++.++......+||||++|+.|++
T Consensus        71 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~y~~~--~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~ig~~gs~t~l  146 (251)
T PF13621_consen   71 VNFERERMPFRDFLDRLRANRDQRDKPYYYLQN--WNLFEDFPELREDN--DLPFPPELFGKEPQSSNLWIGPPGSFTPL  146 (251)
T ss_dssp             TCEEEEEEEHHHHHHHHHHSCHSTSSSEEEEEE--ETHHHHSHHHHCCS---CHHHHCHSCCHCCEEEEEEE-TTEEEEE
T ss_pred             cCCeeEECcHHHHHHHHHhcccccCCceEEEec--CchHHHhhhhhhcc--ccccchhhcccCccccEEEEeCCCceeee
Confidence            34568899999999999987522  24677764  34777888999884  35677777765556789999999999999


Q ss_pred             cccCCCceEEEEEeEeEEEEeCCCCCCCCcceec
Q 026937          185 HKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYV  218 (230)
Q Consensus       185 H~D~~~N~~~qi~G~Kr~~LfpP~~~~~LY~~~~  218 (230)
                      |+|..+|++|||+|+|+|+||||.+..+||+...
T Consensus       147 H~D~~~n~~~~i~G~K~~~L~pP~~~~~l~~~~~  180 (251)
T PF13621_consen  147 HYDPSHNLLAQIRGRKRWILFPPDDSPNLYPRPD  180 (251)
T ss_dssp             EE-SSEEEEEEEESEEEEEEE-GGGGGGCTBETT
T ss_pred             eECchhhhhhccCCCEEEEEECCcccccccccee
Confidence            9999999999999999999999999999998874

...

>KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]

Probab=99.93  E-value=4.4e-26  Score=192.86  Aligned_cols=173  Identities=18%  Similarity=0.310  Sum_probs=139.0

Q ss_pred             cceeecC-CCCHHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCCCCEEEEeccCCCCCcccccCCCCC
Q 026937           21 TIERLES-PPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRS   99 (230)
Q Consensus        21 ~I~ri~~-~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~~~~~g~~d~~~~~~~~~~   99 (230)
                      .++|.+. .+|.++|.++|-++++||||+|++.  +|||.++||. ++|.+++|++ .+.+-  ++   +          
T Consensus        53 n~~r~~~~~isveeF~~~ferp~kPVll~g~~D--gW~A~ekWT~-drLskkyrnq-~Fkcg--ed---~----------  113 (407)
T KOG2130|consen   53 NGNRERRRNISVEEFIERFERPYKPVLLSGLTD--GWPASEKWTL-DRLSKKYRNQ-KFKCG--ED---N----------  113 (407)
T ss_pred             cchhhhhcCCCHHHHHHHhcccCCceEeecccc--CCchhhhhhH-HHHHHHhcCc-ccccc--cc---C----------
Confidence            4444443 5999999999999999999999999  9999999999 9999999998 66552  21   1          


Q ss_pred             CccccccccceEEEecHHHHHHHHHcCCCCccccccccccccccccch--hhhcccccchhhhhhhhC-----CCCCccE
Q 026937          100 GEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYS--VLGSDCDEHIAWATEALG-----CYPEAVN  172 (230)
Q Consensus       100 ~~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~~--~L~~Di~~~~p~~~~~~~-----~~~~~~~  172 (230)
                              +...++|+|+.|++++.++.+. .++|+.  ++.+.+..|  .|.+|+..+..|..+.|+     ..|+.++
T Consensus       114 --------~gnsv~MKmkyY~~Ym~~~Rdd-sPLYiF--DssFgE~~~~rkLl~dY~VPk~F~dDlF~y~g~e~RPpyRW  182 (407)
T KOG2130|consen  114 --------NGNSVKMKMKYYIEYMKSTRDD-SPLYIF--DSSFGEHAPRRKLLEDYSVPKYFRDDLFQYLGEERRPPYRW  182 (407)
T ss_pred             --------CCcceeeeHHHHHHHHhccccC-CCeEEe--cchhhcccchhhhhhhcCcchhhhHHHHHhcCcccCCCcee
Confidence                    2356799999999999988654 579998  344655555  699999876667776663     2466889


Q ss_pred             EEeeCCCCCCCccccCCC--ceEEEEEeEeEEEEeCCCCCCCCcceecCCCCe
Q 026937          173 LWIGNQLSETSFHKDHYE--NLYTVVSGQKHFLLLPPTDVHRCGTVYVGAGGA  223 (230)
Q Consensus       173 lwiG~~gt~T~lH~D~~~--N~~~qi~G~Kr~~LfpP~~~~~LY~~~~~~~~~  223 (230)
                      +-|||++++|..|.|+..  .++++|+|+|||+||||...+.+-...+.-+|.
T Consensus       183 fvmGParSGtsiHIDPlgTSAWNtll~GhKrW~LfPp~~p~~lvkv~~~e~g~  235 (407)
T KOG2130|consen  183 FVMGPARSGTSIHIDPLGTSAWNTLLQGHKRWVLFPPGTPPELVKVTVDEGGK  235 (407)
T ss_pred             EEecCCCCCceeEECCcchHHHHHHhhccceeEEcCCCCCCCceeecccccCC
Confidence            999999999999999876  468999999999999999988877555544443

>KOG2132 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]

Probab=99.92  E-value=1.9e-25  Score=190.18  Aligned_cols=170  Identities=21%  Similarity=0.295  Sum_probs=137.0

Q ss_pred             cceeecCCCCHHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCCCCEEEEeccCCCCCcccccCCCCCC
Q 026937           21 TIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSG  100 (230)
Q Consensus        21 ~I~ri~~~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~~~~~g~~d~~~~~~~~~~~  100 (230)
                      .++..+ .++.++|..+++.++.|+|++|...  ||||.++|.. .||....|.+ .|+|+++.+- .+.          
T Consensus       128 ~~~~~~-~~~l~~~l~d~~~~~~p~~~l~~~~--hwpa~~kw~l-~~l~~va~~r-TvpvEvg~~y-~~~----------  191 (355)
T KOG2132|consen  128 DVPGED-RLSLQEFLNDTVGRGTPVILLGFNW--HWPAIQKWSL-GYLQQVAGNR-TVPVEVGSTY-ADE----------  191 (355)
T ss_pred             hhcccc-chHHHHHHHHhhcCCCceEEecccc--cchHhhhcch-hHHHhcccce-eeeeeccccc-chh----------
Confidence            444555 4999999999999999999999999  9999999977 9999999999 9999986531 111          


Q ss_pred             ccccccccceEEEecHHHHHHHHHcCCCCccccccccccccccccchhhhcccccchhhhhhhhCCCC--CccEEEeeCC
Q 026937          101 EISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYP--EAVNLWIGNQ  178 (230)
Q Consensus       101 ~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~~~L~~Di~~~~p~~~~~~~~~~--~~~~lwiG~~  178 (230)
                             .+....|++.+|+.+....++. ...|++++.  +..+.+++..||..+-.+.  ..+...  ..++.|||+.
T Consensus       192 -------~w~q~l~t~~~g~~R~~~~~p~-~~~YlAqh~--lfdqi~elk~Di~iPDyc~--~~~f~~~~v~~~~w~Gpa  259 (355)
T KOG2132|consen  192 -------DWSQNLMTQIKGIKRCILFEPR-ECLYLAQHH--LFDQIPELKFDISIPDYCS--FPNFENEVVDINAWIGPA  259 (355)
T ss_pred             -------HHHhhhHHHhhhhhhhhcCCcc-ccchhhhhh--hhccchhhhhccCCCceee--cCCCCccccceeEEeccC
Confidence                   2345589999999988877654 467887653  6678888999986321110  112222  4789999999


Q ss_pred             CCCCCccccCCCceEEEEEeEeEEEEeCCCCCCCCcceec
Q 026937          179 LSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYV  218 (230)
Q Consensus       179 gt~T~lH~D~~~N~~~qi~G~Kr~~LfpP~~~~~LY~~~~  218 (230)
                      |++||+|+|+.+|+++||.|+|+|+||+|.++.+|||...
T Consensus       260 GtV~pih~dp~hNi~~qv~G~k~i~l~~p~~s~~lyP~d~  299 (355)
T KOG2132|consen  260 GTVLPIHMDPWHNILSQVFGRKRIRLYPPEDSGALYPTDT  299 (355)
T ss_pred             CceeccccccccceeeeeecceEEEEecCcccCCCCCccc
Confidence            9999999999999999999999999999999999999874

>KOG2131 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]

Probab=99.31  E-value=1.3e-12  Score=113.26  Aligned_cols=171  Identities=18%  Similarity=0.199  Sum_probs=103.9

Q ss_pred             cceeecC-CCCHHHHHHHhhcCCCcEEEEcCCCCCCCCcc----ccCCCh-----------hhHHHHcCCCCCEEEEecc
Q 026937           21 TIERLES-PPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAF----SLWPHP-----------SYLSKTLSSSPPVSVHLSP   84 (230)
Q Consensus        21 ~I~ri~~-~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~----~~Wt~~-----------eyL~~~~G~~~~V~v~~~~   84 (230)
                      .|+|+-+ ..+..+|...+..++.||+|.++..  +|++.    ..|.++           .|.+.+..+. .++|....
T Consensus        29 ~v~r~~g~~~d~~~~a~~~~~k~~~v~is~v~~--d~~~~~~~~~s~~dl~~~~~l~n~~~~f~k~~v~~~-~~~v~~~~  105 (427)
T KOG2131|consen   29 CVLRLIGPTADYGDFAERDTHKRPGVLISYVLE--DWPCVSRDNESGADLNNNPDLKNFARSFAKRIVQNG-DKNVFLCD  105 (427)
T ss_pred             hhhhhcccccCcccchhhhcccCCCcccccccc--CcccccCCCcchhhhccCcchhHHHHHHhHHHHhcC-Cccccccc
Confidence            6778876 5888999999999999999999999  99998    455421           2333333333 33333221


Q ss_pred             CCCCCcccccCCCCCCccccccccceEEEecHHHHHHHHHcCCCC-----------------------cccccccccccc
Q 026937           85 NGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNG-----------------------DVVAYLQQQNDC  141 (230)
Q Consensus        85 ~g~~d~~~~~~~~~~~~~~~~f~~~~~~~m~~~efl~~~~~~~~~-----------------------~~~~Yl~~~~~~  141 (230)
                      ..                  .|-+....++++.+|+..+.+-...                       ...+|+...  +
T Consensus       106 ~s------------------~f~~~~~Le~ny~d~~v~~a~~~e~e~~~l~lad~~~~e~~~~~~~~q~p~ly~kDw--H  165 (427)
T KOG2131|consen  106 LS------------------LFPDYEYLERNYGDFVVPVANCNEKERYSLKLADWEFREEQVQLACPQAPSLYGKDW--H  165 (427)
T ss_pred             cc------------------cCccHHHHHhhhhhcchhhccccchhhhhhhhccchhHHHhHhhhcCCCccccccch--h
Confidence            11                  1123334456666666555543211                       122333321  1


Q ss_pred             ccccchhhhccccc--chhhhh----hhhC--CCCCccEEEeeCCCCCCCccccCCC--ceEEEEEeEeEEEEeCCCCCC
Q 026937          142 FRDEYSVLGSDCDE--HIAWAT----EALG--CYPEAVNLWIGNQLSETSFHKDHYE--NLYTVVSGQKHFLLLPPTDVH  211 (230)
Q Consensus       142 l~~~~~~L~~Di~~--~~p~~~----~~~~--~~~~~~~lwiG~~gt~T~lH~D~~~--N~~~qi~G~Kr~~LfpP~~~~  211 (230)
                      |...++   .|...  +.-|..    ++..  ...+.+++.+|++||.||+|.|.++  .+.+.|.|+|+|+||||.|..
T Consensus       166 L~~~~d---~~~~~~~pd~F~~dwlne~~i~~~~ddyrFvy~Gp~gSwtp~HaDVf~s~swS~nicG~KrWl~~pP~qe~  242 (427)
T KOG2131|consen  166 LYRFLD---NDFPYWTPDLFAKDWLNEFVIDGESDDYRFVYAGPAGSWTPFHADVFHSPSWSVNICGRKRWLLYPPEQEQ  242 (427)
T ss_pred             eeeecC---cccccccchhhhhcccchhhccCCCCceeEEEeccCCCCCccchhhhcCCcceeeeecceeEEEeChHHhh
Confidence            111110   11110  000111    1111  1235789999999999999999776  568999999999999999998


Q ss_pred             CCccee
Q 026937          212 RCGTVY  217 (230)
Q Consensus       212 ~LY~~~  217 (230)
                      .|+-++
T Consensus       243 ~l~dr~  248 (427)
T KOG2131|consen  243 TLADRY  248 (427)
T ss_pred             hhhhhc
Confidence            888766

>COG2850 Uncharacterized conserved protein [Function unknown]

Probab=98.37  E-value=9.7e-07  Score=77.52  Aligned_cols=152  Identities=19%  Similarity=0.247  Sum_probs=88.2

Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCCCCEEEEeccCCCCCcccccCCCCCCccccccc
Q 026937           28 PPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFA  107 (230)
Q Consensus        28 ~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~~~~~g~~d~~~~~~~~~~~~~~~~f~  107 (230)
                      .+|+++|+++|- ..||+||||++.  +.  .+.-+. +-|.+-.-.. .|.-+...... +          |       
T Consensus        14 glt~~~FL~~YW-qkKPlliR~a~p--~~--~~p~~p-deLa~La~~e-dV~srLV~~~~-~----------~-------   68 (383)
T COG2850          14 GLTPEDFLRDYW-QKKPLLIRNAFP--EF--HSPLSP-DELAGLAQEE-DVTSRLVSHES-D----------G-------   68 (383)
T ss_pred             CCCHHHHHHHHh-hhcchHHhhccc--cc--ccCCCH-HHHHHHhccc-cccchhhhhcc-C----------C-------
Confidence            599999999885 678999999987  52  233333 4477766655 55443221100 0          0       


Q ss_pred             cceEEEecHHHHHHHHHcCCCCccccccccccccccccchhhhcccccchhhhhhhhCCCCCccEEEeeCCCCCCCcccc
Q 026937          108 SAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKD  187 (230)
Q Consensus       108 ~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~~~L~~Di~~~~p~~~~~~~~~~~~~~lwiG~~gt~T~lH~D  187 (230)
                      .+....-+|.++ +.....  .+-.+-.+..+ ..-.+...|.+-+..    .+.   ...+.+.+-....|.+-.-|+|
T Consensus        69 ~w~~~~gPfe~~-d~~~~p--~~wsllvq~vd-~w~p~v~~l~~~Frf----lP~---wr~ddiMIS~a~~GGgvg~H~D  137 (383)
T COG2850          69 TWQVSHGPFEEE-DFLGLP--RNWSLLVQAVD-HWHPEVAALMEPFRF----LPD---WRIDDIMISFAAPGGGVGPHFD  137 (383)
T ss_pred             ceeEeeCccchh-ccccCC--cCceEEEehhh-hcCHHHHHHHHHhcc----Ccc---ccccceEEEEecCCCccCcccc
Confidence            233444555554 222221  11111111111 222333444443321    111   1123445556777889999999


Q ss_pred             CCCceEEEEEeEeEEEEeCCCCCCCCcc
Q 026937          188 HYENLYTVVSGQKHFLLLPPTDVHRCGT  215 (230)
Q Consensus       188 ~~~N~~~qi~G~Kr~~LfpP~~~~~LY~  215 (230)
                      .|++|+.|..|+|||.|=.+.+...+++
T Consensus       138 ~YDVfliQg~G~RRW~v~~~~~~~~~~~  165 (383)
T COG2850         138 QYDVFLIQGQGRRRWRVGKKCNMSTLCP  165 (383)
T ss_pred             chheeEEeecccceeecCCcccccCcCC
Confidence            9999999999999999988877766666

>PF08007 Cupin_4: Cupin superfamily protein; InterPro: IPR022777 This signature represents primarily the cupin fold found in JmjC transcription factors

Probab=97.73  E-value=2.6e-05  Score=68.72  Aligned_cols=40  Identities=20%  Similarity=0.296  Sum_probs=33.5

Q ss_pred             CccEEEeeCCC-CCCCccccCCCceEEEEEeEeEEEEeCCC
Q 026937          169 EAVNLWIGNQL-SETSFHKDHYENLYTVVSGQKHFLLLPPT  208 (230)
Q Consensus       169 ~~~~lwiG~~g-t~T~lH~D~~~N~~~qi~G~Kr~~LfpP~  208 (230)
                      -..|++++++| .....|+|.+++|.+|+.|+|+|.|+++.
T Consensus       114 ~~~n~Y~tp~g~~g~~~H~D~~dvfvlQ~~G~K~W~l~~~~  154 (319)
T PF08007_consen  114 VGANAYLTPPGSQGFGPHYDDHDVFVLQLEGRKRWRLYPPP  154 (319)
T ss_dssp             EEEEEEEETSSBEESECEE-SSEEEEEEEES-EEEEEE-SC
T ss_pred             cceEEEecCCCCCCccCEECCcccEEEECCceeEEEECCCC
Confidence            36899999998 68899999999999999999999999843

The fold is also found in lysine-specific demethylase NO66.; PDB: 2XDV_A 1VRB_B 4DIQ_B.

>smart00558 JmjC A domain family that is part of the cupin metalloenzyme superfamily

Probab=97.05  E-value=0.00044  Score=45.04  Aligned_cols=29  Identities=31%  Similarity=0.461  Sum_probs=25.3

Q ss_pred             ccEEEeeCCCCCCCccccCCC--ceEEEEEe
Q 026937          170 AVNLWIGNQLSETSFHKDHYE--NLYTVVSG  198 (230)
Q Consensus       170 ~~~lwiG~~gt~T~lH~D~~~--N~~~qi~G  198 (230)
                      .+++|+|+.+|.|++|+|.++  |++.|..|
T Consensus        27 ~~~~~~G~~~s~t~~H~d~~~~~n~~~~~~~   57 (57)
T smart00558       27 VPYLYMGMAGSVTPWHIDDYDLVNYLHQGAG   57 (57)
T ss_pred             cceEEEeCCCCccceeEcCCCeEEEEEecCC
Confidence            488999999999999999999  87776654

Probable enzymes, but of unknown functions, that regulate chromatin reorganisation processes (Clissold and Ponting, in press).

>KOG3706 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.73  E-value=0.00089  Score=60.95  Aligned_cols=48  Identities=31%  Similarity=0.436  Sum_probs=39.5

Q ss_pred             hhhCCCCCccEEEeeCCCC-CCCccccCCCceEEEEEeEeEEEEeCCCCC
Q 026937          162 EALGCYPEAVNLWIGNQLS-ETSFHKDHYENLYTVVSGQKHFLLLPPTDV  210 (230)
Q Consensus       162 ~~~~~~~~~~~lwiG~~gt-~T~lH~D~~~N~~~qi~G~Kr~~LfpP~~~  210 (230)
                      +.||+ .-..|+++-|+|+ +-+.|||.-+.|+.||.|||+|+||.|...
T Consensus       311 eqFgc-~vGaNvYLTPagSqGfaPHyDdIeaFvlQvEGrK~Wrly~P~~~  359 (629)
T KOG3706|consen  311 EQFGC-LVGANVYLTPAGSQGFAPHYDDIEAFVLQVEGRKHWRLYHPTVP  359 (629)
T ss_pred             HHhcc-ccccceeecCCCCCCCCCchhhhhhhhheeccceeeEeecCCCc
Confidence            45553 2257899998886 668899999999999999999999998754

>PF02373 JmjC: JmjC domain, hydroxylase; InterPro: IPR013129 Jumonji protein is required for neural tube formation in mice []

Probab=94.64  E-value=0.022  Score=41.85  Aligned_cols=42  Identities=29%  Similarity=0.509  Sum_probs=30.6

Q ss_pred             EEEeeCCCCCCCccccCCCc--e-EEEEEeEeEEEEeCCCCCCCC
Q 026937          172 NLWIGNQLSETSFHKDHYEN--L-YTVVSGQKHFLLLPPTDVHRC  213 (230)
Q Consensus       172 ~lwiG~~gt~T~lH~D~~~N--~-~~qi~G~Kr~~LfpP~~~~~L  213 (230)
                      ++.||..+|.|++|.|....  + +....|.|.|.++||.+...+
T Consensus         1 ~~~ig~~~s~t~~H~e~~~~~sv~~~~~g~~k~W~~v~~~~~~~~   45 (114)
T PF02373_consen    1 WLYIGMKGSYTPWHIEDNGLSSVNYHHFGGSKVWYIVPPEDADKF   45 (114)
T ss_dssp             EEEEE-TTEEEEEEE-GGG-EEEEEEEEESEEEEEEE-GGGHHHH
T ss_pred             CEEEeCCCcCCCcEecCCCCceeeeeccCcceEeEEechhhhhhH
Confidence            47899999999999997653  2 456788999999999886544

There is evidence of domain swapping within the jumonji family of transcription factors []. This domain is often associated with jmjN (see IPR003349 from INTERPRO) and belongs to the Cupin superfamily [].; PDB: 2YU2_A 2YU1_A 3AVR_A 3AVS_A 2OX0_B 2OQ6_B 2WWJ_A 2Q8D_A 3PDQ_A 2YBK_A ....

>KOG1633 consensus F-box protein JEMMA and related proteins with JmjC, PHD, F-box and LRR domains [Chromatin structure and dynamics]

Probab=84.20  E-value=1.2  Score=43.98  Aligned_cols=105  Identities=20%  Similarity=0.263  Sum_probs=63.7

Q ss_pred             EEEecHHHHHHHHHcCCCCccccccc-cc---c---ccccccchhhhccccc-chhhhhhhhCCCCC-ccEEEeeCCCCC
Q 026937          111 VERLPFDEALQLVSNSKNGDVVAYLQ-QQ---N---DCFRDEYSVLGSDCDE-HIAWATEALGCYPE-AVNLWIGNQLSE  181 (230)
Q Consensus       111 ~~~m~~~efl~~~~~~~~~~~~~Yl~-~~---~---~~l~~~~~~L~~Di~~-~~p~~~~~~~~~~~-~~~lwiG~~gt~  181 (230)
                      ..+|+|.+|++++......  .+|=. +.   +   +++. +-|++..++.- +--|.++.....+. .-...|+-+++.
T Consensus        62 ~~km~~~~~~~yy~~~~~~--R~yNVisLEfS~Trl~~~V-~~P~ivr~ldwV~n~wP~~~~~~~P~vqkyclmsv~~~Y  138 (776)
T KOG1633|consen   62 DCKMTLKEFVKYYSSPQRK--RLYNVISLEFSDTRLSNLV-ESPEIVRKLDWVDNQWPDDLKMEYPKVQKYCLMSVKDSY  138 (776)
T ss_pred             cccccHHHHhhhhcCcchh--hhhheeccccCcchHHhcC-CCchhhhhhhchhccCCchhcccccccccceeeeccccc
Confidence            4489999999999887532  33321 10   0   0011 11333333320 11232322222332 455779999999


Q ss_pred             CCccccCCCc--eEEEEEeEeEEEEeCCCCCCC-Ccceec
Q 026937          182 TSFHKDHYEN--LYTVVSGQKHFLLLPPTDVHR-CGTVYV  218 (230)
Q Consensus       182 T~lH~D~~~N--~~~qi~G~Kr~~LfpP~~~~~-LY~~~~  218 (230)
                      |.+|.|....  ++-.+.|.|++.|.+|.+... +|..+.
T Consensus       139 tdfhidfggtsvwyhil~G~K~f~lI~pt~~nl~~ye~w~  178 (776)
T KOG1633|consen  139 TDFHIDFGGTSVWYHILAGEKTFYLIPPTCENLELYECWE  178 (776)
T ss_pred             cccccCCCCcchhhhhhccccceeeeCCcccchhhhhhhh
Confidence            9999997653  367799999999999998765 555555

>KOG1356 consensus Putative transcription factor 5qNCA, contains JmjC domain [Transcription]

Probab=81.41  E-value=1  Score=44.22  Aligned_cols=44  Identities=23%  Similarity=0.422  Sum_probs=33.6

Q ss_pred             HHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCCCCEEEE
Q 026937           32 LQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVH   81 (230)
Q Consensus        32 ~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~   81 (230)
                      ..| +++-..++|||++|+..  .... ..|.+ +-|...+|+. .+.+.
T Consensus       531 ~~F-QEhWkqGqPViVs~V~~--~l~g-~lW~P-~a~~~~~g~q-~~~l~  574 (889)
T KOG1356|consen  531 KHF-QEHWKQGQPVIVSGVHK--KLNG-LLWKP-EALSRAFGDQ-VVDLS  574 (889)
T ss_pred             HHH-HHHHhcCCcEEehHhhh--hccc-cccch-HHHHHHhccc-hhhhh
Confidence            346 45668999999999987  5443 58998 8899899998 55553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	230
3uyj_A	248	Lysine-specific demethylase 8; jellyroll-like all	3e-34
3al5_A	338	HTYW5, JMJC domain-containing protein C2ORF60; tRN	1e-33
3d8c_A	349	Hypoxia-inducible factor 1 alpha inhibitor; FIH, H	2e-31
3k2o_A	336	Bifunctional arginine demethylase and lysyl-hydro	4e-24
3pua_A	392	GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe	4e-07
3kv9_A	397	JMJC domain-containing histone demethylation prote	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vrb_A	342	Putative asparaginyl hydroxylase; 2636534, structu	3e-05
3k3o_A	371	PHF8, PHD finger protein 8; histone demethylase, c	7e-04

>3uyj_A Lysine-specific demethylase 8; jellyroll-like all beta fold, nuclear, oxidored; HET: AKG; 2.35A {Homo sapiens} PDB: 4aap_A* Length = 248

 Score =  121 bits (306), Expect = 3e-34
 Identities = 37/198 (18%), Positives = 64/198 (32%), Gaps = 26/198 (13%)

Query: 15  SLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSS 74
            +    T+ RL   P+   F   ++   +P I+K V+ H  WP    W    Y+ +    
Sbjct: 9   DVKLEKTVPRLH-RPSLQHFREQFLVPGRPVILKGVADH--WPCMQKW-SLEYIQEIAGC 64

Query: 75  SPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAY 134
              V V +      +                        +  +E +     ++  DV  Y
Sbjct: 65  RT-VPVEVGSRYTDEE------------------WSQTLMTVNEFISKYIVNEPRDV-GY 104

Query: 135 LQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYT 194
           L Q      D+   L  D       +          +N W G Q + +  H+D  +N   
Sbjct: 105 LAQHQ--LFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLV 162

Query: 195 VVSGQKHFLLLPPTDVHR 212
            V G+K+  L  P +   
Sbjct: 163 QVMGRKYIRLYSPQESGA 180

>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A* Length = 338

 Score =  122 bits (308), Expect = 1e-33
 Identities = 39/206 (18%), Positives = 72/206 (34%), Gaps = 29/206 (14%)

Query: 16  LGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSS 75
            G +  + RLE   +  QF++    Q KP +++ +      P  S W    YLS+     
Sbjct: 25  AGQHLPVPRLEGV-SREQFMQHLYPQRKPLVLEGID---LGPCTSKWT-VDYLSQVGGKK 79

Query: 76  PPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVA-- 133
             V +H++   + D                  +     LPFD+ +Q  +  K+ +     
Sbjct: 80  E-VKIHVAAVAQMD--------------FISKNFVYRTLPFDQLVQRAAEEKHKEFFVSE 124

Query: 134 ----YLQQQNDCFRDEYSVLGSDCDE---HIAWATEALGCYPEAVNLWIGNQLSETSFHK 186
               YL+   +  R + + +          I +          +    I +   +   H 
Sbjct: 125 DEKYYLRSLGEDPRKDVADIRKQFPLLKGDIKFPEFFKEEQFFSSVFRISSPGLQLWTHY 184

Query: 187 DHYENLYTVVSGQKHFLLLPPTDVHR 212
           D  +NL   V+G+K  +L  P D   
Sbjct: 185 DVMDNLLIQVTGKKRVVLFSPRDAQY 210

>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ... Length = 349

 Score =  117 bits (293), Expect = 2e-31
 Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 17/211 (8%)

Query: 8   WDEVRELSLGSNS-TIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPS 66
           WDE +  S    +  I RL           + +   +P ++ + +L   +PA   W    
Sbjct: 27  WDESQLRSYSFPTRPIPRLSQSD---PRAEELIENEEPVVLTDTNLV--YPALK-W-DLE 79

Query: 67  YLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNS 126
           YL + + +    SV+ +   +          +          ++ E + F E ++ + + 
Sbjct: 80  YLQENIGNGD-FSVYSASTHKFL---YYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDI 135

Query: 127 KNGDVVAYLQQQNDCFRDEYSVLGSD-CDEHIAWATEALGC----YPEAVNLWIGNQLSE 181
           +       L  Q          +  D    +  W  +  G        +  L IG + + 
Sbjct: 136 QQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNV 195

Query: 182 TSFHKDHYENLYTVVSGQKHFLLLPPTDVHR 212
           T  H    +N +  + G K  +L PP     
Sbjct: 196 TPAHYGEQQNFFAQIKGYKRCILFPPDQFEC 226

>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A* Length = 336

 Score = 97.0 bits (241), Expect = 4e-24
 Identities = 26/200 (13%), Positives = 55/200 (27%), Gaps = 36/200 (18%)

Query: 21  TIERLE-SPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVS 79
            +ER +    +  +F+  Y    KP ++ N      W A   W     L +   +     
Sbjct: 46  NVERADALQLSVEEFVERYERPYKPVVLLNAQEG--WSAQEKW-TLERLKRKYRNQ-KFK 101

Query: 80  VHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQN 139
                +G +                        ++     ++ + ++++     Y+   +
Sbjct: 102 CGEDNDGYS-----------------------VKMKMKYYIEYMESTRDDS-PLYIFDSS 137

Query: 140 DCFRDEYSVLGSDCDEHIAWATEALGC-----YPEAVNLWIGNQLSETSFHKDHYE--NL 192
                +   L  D      +  +          P      +G   S T  H D       
Sbjct: 138 YGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAW 197

Query: 193 YTVVSGQKHFLLLPPTDVHR 212
             +V G K + L P +    
Sbjct: 198 NALVQGHKRWCLFPTSTPRE 217

>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A* Length = 392

 Score = 49.0 bits (116), Expect = 4e-07
 Identities = 34/213 (15%), Positives = 65/213 (30%), Gaps = 37/213 (17%)

Query: 11  VRELSLGSNSTIERLESPPTPLQFLRDYVSQN---KPCIIKNVS-LHHQWPAFSLWPHPS 66
           ++EL   +  + E + +     Q    Y+ ++   +P ++     L    PA + +   S
Sbjct: 31  IKELRSRTFPSAEDVVARVPGSQLTLGYMEEHGFTEPILVPKKDGLGLAVPAPTFYV--S 88

Query: 67  YLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNS 126
            +   +     V V        D                       ++   E +    ++
Sbjct: 89  DVENYVGPERSVDV-------TDV----------------TKQKDCKMKLKEFVDYYYST 125

Query: 127 KNGDV--VAYLQQQNDCFRDEYSV--LGSDCD-EHIAWATEALGCYPEAVN-LWIGNQLS 180
               V  V  L+  +           +          W  +AL   P+      I  + S
Sbjct: 126 NRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLICVKDS 185

Query: 181 ETSFHKDHYENL--YTVVSGQKHFLLLPPTDVH 211
            T FH D       Y V+ G+K F L+ P   +
Sbjct: 186 YTDFHIDSGGASAWYHVLKGEKTFYLIRPASAN 218

>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A* Length = 397

 Score = 47.9 bits (113), Expect = 1e-06
 Identities = 32/208 (15%), Positives = 71/208 (34%), Gaps = 27/208 (12%)

Query: 11  VRELSLGSNSTIERLESPPTPLQFLRDYVSQN---KPCIIKNVS-LHHQWPAFSLWPHPS 66
           ++EL      + + +       Q  + Y+ ++    P ++  +  L  + P+ +      
Sbjct: 32  IKELRSRVFPSADEIIIKMHGSQLTQRYLEKHGFDVPIMVPKLDDLGLRLPSPTFSV--M 89

Query: 67  YLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNS 126
            + + +     + V          +            + F + +  +   +      S++
Sbjct: 90  DVERYVGGDKVIDVIDVARQADSKMTL------HNYVKYFMNPNRPK-VLNVISLEFSDT 142

Query: 127 KNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVN-LWIGNQLSETSFH 185
           K  ++V    +  D  +    V          W  +++   P       +G Q S T FH
Sbjct: 143 KMSELV----EVPDIAKKLSWV-------ENYWPDDSVFPKPFVQKYCLMGVQDSYTDFH 191

Query: 186 KDHYEN--LYTVVSGQKHFLLLPPTDVH 211
            D       Y V+ G+K F L+ PTD +
Sbjct: 192 IDFGGTSVWYHVLWGEKIFYLIKPTDEN 219

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 1e-05
 Identities = 31/223 (13%), Positives = 64/223 (28%), Gaps = 60/223 (26%)

Query: 4   VKKLWDEVRELSLGSNSTIERLESPPTPLQFLRDYVS------QNKPC--IIKNVSLHHQ 55
           ++ L   + ++     S  +   +    +  ++  +         + C  ++ NV     
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA 258

Query: 56  WPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLV--TLTHPRSGEISQCFASAHVER 113
           W AF+L        K L ++    V        D L   T TH      S          
Sbjct: 259 WNAFNLS------CKILLTTRFKQV-------TDFLSAATTTHISLDHHSMTLTP----- 300

Query: 114 LPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNL 173
              DE   L+                         L     +      E L   P  +++
Sbjct: 301 ---DEVKSLLLK----------------------YLDCRPQD---LPREVLTTNPRRLSI 332

Query: 174 WIGNQLSETSFHKDHYE--NLYTVVSGQKHFL-LLPPTDVHRC 213
            I   + +     D+++  N   + +  +  L +L P +  + 
Sbjct: 333 -IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM 374

>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11 Length = 342

 Score = 43.2 bits (101), Expect = 3e-05
 Identities = 27/197 (13%), Positives = 53/197 (26%), Gaps = 33/197 (16%)

Query: 18  SNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPP 77
           + S +E + SP T  +FL +Y    KP + +             +               
Sbjct: 17  TESVLESIISPVTMSEFLEEYW-PVKPLVARG--------EVERFTSI------------ 55

Query: 78  VSVHLSPNGRADSLVTLTHPRSGEISQCFASAHVER-LPFDEALQLVSNSKN-GDVVAYL 135
                    +  +L  +    +  +     +   E     D  L   + +    +  A L
Sbjct: 56  ----PGFE-KVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAAL 110

Query: 136 QQQN-DCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYT 194
           +    D F  +           +               ++          H D Y NL  
Sbjct: 111 EFDFTDLFIPQVRRWIEKLKAELRL----PAGTSSKAIVYAAKNGGGFKAHFDAYTNLIF 166

Query: 195 VVSGQKHFLLLPPTDVH 211
            + G+K + L    +V 
Sbjct: 167 QIQGEKTWKLAKNENVS 183

>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A* Length = 371

 Score = 39.0 bits (90), Expect = 7e-04
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 156 HIAWATEALGCYPEAVN-LWIGNQLSETSFHKDHYENL--YTVVSGQKHFLLLPPTDVH 211
              W  E +   P       +  + S T FH D       Y V+ G+K F L+ PT+ +
Sbjct: 133 ENLWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNAN 191

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	230
4gjz_A	235	Lysine-specific demethylase 8; JMJC, beta barrel,	100.0
3k2o_A	336	Bifunctional arginine demethylase and lysyl-hydro	100.0
3al5_A	338	HTYW5, JMJC domain-containing protein C2ORF60; tRN	99.98
3d8c_A	349	Hypoxia-inducible factor 1 alpha inhibitor; FIH, H	99.96
2yu1_A	451	JMJC domain-containing histone demethylation PROT;	99.88
3k3o_A	371	PHF8, PHD finger protein 8; histone demethylase, c	99.82
3pua_A	392	GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe	99.8
3kv9_A	397	JMJC domain-containing histone demethylation prote	99.78
3kv5_D	488	JMJC domain-containing histone demethylation prote	99.76
3kv4_A	447	PHD finger protein 8; epigenetics, histone CODE, c	99.73
1vrb_A	342	Putative asparaginyl hydroxylase; 2636534, structu	99.73
2xdv_A	442	MYC-induced nuclear antigen; ribosome biogenesis,	99.44
4diq_A	489	Lysine-specific demethylase NO66; structural genom	99.18
3pur_A	528	Lysine-specific demethylase 7 homolog; oxidoreduct	98.9
2ypd_A	392	Probable JMJC domain-containing histone demethyla	96.26
2xxz_A	332	Lysine-specific demethylase 6B; oxidoreductase, hi	93.03
3avr_A	531	Lysine-specific demethylase 6A; cupin superfamily,	90.24

>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*

Probab=100.00  E-value=2e-36  Score=251.78  Aligned_cols=174  Identities=21%  Similarity=0.299  Sum_probs=138.9

Q ss_pred             CcceeecCCCCHHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCCCCEEEEeccCCCCCcccccCCCCC
Q 026937           20 STIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRS   99 (230)
Q Consensus        20 ~~I~ri~~~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~~~~~g~~d~~~~~~~~~~   99 (230)
                      ++|+|++. +|+++|+++|+.+++||||+|++.  +|||+++|+. +||++++|+. .|+|+.+.+...           
T Consensus         1 stipri~~-pS~~eF~~~y~~~~~Pvvi~g~~~--~wpa~~~w~~-~yL~~~~g~~-~v~v~~~~~~~~-----------   64 (235)
T 4gjz_A            1 STVPRLHR-PSLQHFREQFLVPGRPVILKGVAD--HWPCMQKWSL-EYIQEIAGCR-TVPVEVGSRYTD-----------   64 (235)
T ss_dssp             CBCCEEES-CCHHHHHHHTTTTTCCEEEESSST--TSHHHHHCSH-HHHHHHHTTS-EEEEEEC----------------
T ss_pred             CCCCCCCC-CCHHHHHHHHhcCCCcEEEeCCCc--CCcccccCCH-HHHHHHcCCC-eEEEEecCcccC-----------
Confidence            47999997 999999999999999999999999  9999999998 9999999999 999987542111           


Q ss_pred             CccccccccceEEEecHHHHHHHHHcCCCCccccccccccccccccchhhhcccccchhhhhhhhCCCCCccEEEeeCCC
Q 026937          100 GEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQL  179 (230)
Q Consensus       100 ~~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~~~L~~Di~~~~p~~~~~~~~~~~~~~lwiG~~g  179 (230)
                             .+.....|+|++|++.+...... ...|+.+.  .+...+++|.+|+..+..+....+.......++|||++|
T Consensus        65 -------~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~--~~~~~~~~l~~d~~~p~~~~~~~~~~~~~~~~~wiG~~g  134 (235)
T 4gjz_A           65 -------EEWSQTLMTVNEFISKYIVNEPR-DVGYLAQH--QLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQG  134 (235)
T ss_dssp             ---------CEEEEEEHHHHHHHHTSSCCS-SCEEEEEE--CHHHHCHHHHTTCCCCGGGGGSSSCGGGCEEEEEEECTT
T ss_pred             -------CccceeeccHHHHHHHHhhcCCc-ccceeehh--hhhhhhHHHHHhhcCCccccccccccCccceEEEEeCCC
Confidence                   13456789999999998776543 46787754  366777889999864321111111112346899999999


Q ss_pred             CCCCccccCCCceEEEEEeEeEEEEeCCCCCCCCcceecC
Q 026937          180 SETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYVG  219 (230)
Q Consensus       180 t~T~lH~D~~~N~~~qi~G~Kr~~LfpP~~~~~LY~~~~~  219 (230)
                      ++|++|+|.++|++|||.|+|+|+||||.+..+||+....
T Consensus       135 s~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~  174 (235)
T 4gjz_A          135 TISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTH  174 (235)
T ss_dssp             CEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSST
T ss_pred             CCceeeeccccceEEEEeeeEeeEEcCcccccccccCccc
Confidence            9999999999999999999999999999999999986553

>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*

Probab=100.00  E-value=1.8e-33  Score=246.68  Aligned_cols=169  Identities=16%  Similarity=0.266  Sum_probs=140.0

Q ss_pred             CCcceeecC-CCCHHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCCCCEEEEeccCCCCCcccccCCC
Q 026937           19 NSTIERLES-PPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHP   97 (230)
Q Consensus        19 ~~~I~ri~~-~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~~~~~g~~d~~~~~~~~   97 (230)
                      .+.|+|++. .+|+++|.++|+.+++||||+|++.  +|||+++|+. +||++++|+. .|.|+.+.             
T Consensus        44 ~~~I~Ri~~~~lS~eeF~~~y~~~~~PvVi~g~~~--~WpA~~~Wt~-~yL~~~~G~~-~V~v~~~~-------------  106 (336)
T 3k2o_A           44 ADNVERADALQLSVEEFVERYERPYKPVVLLNAQE--GWSAQEKWTL-ERLKRKYRNQ-KFKCGEDN-------------  106 (336)
T ss_dssp             CCCCCEEEGGGCCHHHHHHHTTTTTCCEEEESTTT--TCTHHHHCSH-HHHHHHSTTC-EEEEEECT-------------
T ss_pred             CCCCCEecCCCCCHHHHHHHhhccCCCEEEeCCcC--CChhHhhhhH-HHHHHHhCCc-eEEEEecC-------------
Confidence            469999974 6999999999999999999999999  9999999998 9999999999 89887531             


Q ss_pred             CCCccccccccceEEEecHHHHHHHHHcCCCCccccccccccccccc--cchhhhcccccchhhhhhhhC-----CCCCc
Q 026937           98 RSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRD--EYSVLGSDCDEHIAWATEALG-----CYPEA  170 (230)
Q Consensus        98 ~~~~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~--~~~~L~~Di~~~~p~~~~~~~-----~~~~~  170 (230)
                                +.....|+|++|++++.+... +..+||.+.  ++.+  ++|+|.+|+..+..|..+.+.     ..++.
T Consensus       107 ----------~~~~~~m~~~~fl~~~~~~~~-~~~lYL~d~--~~~e~~~~p~L~~dy~~P~~f~~d~~~~~~~~~~p~~  173 (336)
T 3k2o_A          107 ----------DGYSVKMKMKYYIEYMESTRD-DSPLYIFDS--SYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPY  173 (336)
T ss_dssp             ----------TSCEEEEEHHHHHHHHHHCCC-SSCCCEEES--CGGGSTTGGGGGGGCCCCGGGCCCGGGGGCTTTSCCC
T ss_pred             ----------CCceeeecHHHHHHHHHhcCC-CCCceEecc--cccccccchhHHHhcCCCcccccchhhhcccccCCCc
Confidence                      113568999999999997643 347999854  3543  478899999865445554442     23457


Q ss_pred             cEEEeeCCCCCCCccccCCC--ceEEEEEeEeEEEEeCCCCCCCCccee
Q 026937          171 VNLWIGNQLSETSFHKDHYE--NLYTVVSGQKHFLLLPPTDVHRCGTVY  217 (230)
Q Consensus       171 ~~lwiG~~gt~T~lH~D~~~--N~~~qi~G~Kr~~LfpP~~~~~LY~~~  217 (230)
                      .++|||++|++|++|+|+++  |++|||.|+|+|+||||++...||+..
T Consensus       174 ~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~  222 (336)
T 3k2o_A          174 RWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVT  222 (336)
T ss_dssp             EEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCC
T ss_pred             eEEEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCc
Confidence            89999999999999999887  599999999999999999998888654

>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*

Probab=99.98  E-value=6.5e-33  Score=244.05  Aligned_cols=174  Identities=24%  Similarity=0.321  Sum_probs=137.4

Q ss_pred             CCcceeecCCCCHHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCCCCEEEEeccCCCCCcccccCCCC
Q 026937           19 NSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPR   98 (230)
Q Consensus        19 ~~~I~ri~~~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~~~~~g~~d~~~~~~~~~   98 (230)
                      ..+|+|+++ +|+++|.++|+.+++||||+| +.  +|||+++|+. +||++++|+. .|+|++++.+..+...      
T Consensus        28 ~~~I~r~~~-lS~~eF~~~y~~~~kPvVi~g-~~--~wpa~~~Ws~-dyL~~~~g~~-~V~v~~~~~~~~~~~~------   95 (338)
T 3al5_A           28 HLPVPRLEG-VSREQFMQHLYPQRKPLVLEG-ID--LGPCTSKWTV-DYLSQVGGKK-EVKIHVAAVAQMDFIS------   95 (338)
T ss_dssp             CCBCCEEES-CCHHHHHHHTGGGCCCEEEES-CC--CCTHHHHCCH-HHHHHHHCSC-EEEEEC----CCCC-C------
T ss_pred             CCCCCEECC-CCHHHHHHHhhcCCCeEEEeC-CC--CCcccccCCH-HHHHHhhCCc-eEEEEEcCCCCccccc------
Confidence            458999997 999999999999999999999 78  8999999998 9999999999 9999876644332210      


Q ss_pred             CCccccccccceEEEecHHHHHHHHHcCCC------Ccccccccccc-------ccccccchhhhcccccchhhhhhhhC
Q 026937           99 SGEISQCFASAHVERLPFDEALQLVSNSKN------GDVVAYLQQQN-------DCFRDEYSVLGSDCDEHIAWATEALG  165 (230)
Q Consensus        99 ~~~~~~~f~~~~~~~m~~~efl~~~~~~~~------~~~~~Yl~~~~-------~~l~~~~~~L~~Di~~~~p~~~~~~~  165 (230)
                              .++..+.|+|+||++.+.....      ....+||++.+       ..+..++|+|.+|+..+..|..+.+.
T Consensus        96 --------~~~~~~~~~f~efl~~~~~~~~~~~l~~~~~~~Yl~~~~~~~~~~~~~l~~~~p~L~~d~~~P~~~~~d~~~  167 (338)
T 3al5_A           96 --------KNFVYRTLPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIKFPEFFKEEQFF  167 (338)
T ss_dssp             --------CCCCEEEEEHHHHHHHHHC-CCSSCSSCTTCCCEEECCCSSTTTCCCCHHHHCHHHHTTCCCCCCSCGGGEE
T ss_pred             --------ccceeEEeEHHHHHHHHHhccccccccCCCcccchhhcccccccchhhHhHHCHHHHHhcCCCccccccccc
Confidence                    0345679999999999876432      23468998642       23667789999999753223222221


Q ss_pred             CCCCccEEEeeCCCCCCCccccCCCceEEEEEeEeEEEEeCCCCCCCCcce
Q 026937          166 CYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTV  216 (230)
Q Consensus       166 ~~~~~~~lwiG~~gt~T~lH~D~~~N~~~qi~G~Kr~~LfpP~~~~~LY~~  216 (230)
                          ..++|||++|+.|++|+|+++||+|||.|+|+|+||||.+...||+.
T Consensus       168 ----~s~l~~g~~g~~~~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~  214 (338)
T 3al5_A          168 ----SSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLK  214 (338)
T ss_dssp             ----EEEEEEECTTCEEEEECCSSEEEEEECSSCEEEEEECGGGGGGGTEE
T ss_pred             ----cceeEECCCCCCccceECCcccEEEEEEEEEEEEEECcccccccccC
Confidence                36899999999999999999999999999999999999999999984

>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...

Probab=99.96  E-value=2.7e-30  Score=228.18  Aligned_cols=191  Identities=21%  Similarity=0.322  Sum_probs=138.5

Q ss_pred             HhhhccCCCCCcceeecCCCCHHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCCCCEEEEeccCCCC-
Q 026937           10 EVRELSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRA-   88 (230)
Q Consensus        10 ~~~~~~~~~~~~I~ri~~~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~~~~~g~~-   88 (230)
                      +-|++++. ..+|+|++. +|++ | ++|+.+++||||+|+..  +||| ++|+. +||++++|+. .|+|+.++++++ 
T Consensus        31 ~~~~~~~~-~~~I~Rv~~-~s~~-~-~~y~~~~~PVVi~g~~~--~wpA-~kWt~-eyL~~~~G~~-~V~V~~~~~~~~~  101 (349)
T 3d8c_A           31 QLRSYSFP-TRPIPRLSQ-SDPR-A-EELIENEEPVVLTDTNL--VYPA-LKWDL-EYLQENIGNG-DFSVYSASTHKFL  101 (349)
T ss_dssp             GSCCCSSC-EEECCEECT-TCHH-H-HHHHHTTCCEEESCCCT--TGGG-GGCCH-HHHHHHSCSS-CEEEEEESSSBCC
T ss_pred             HHHhcCCC-CCCceEecC-CChh-H-HHHhcCCccEEEeCCCC--Cccc-ccCCH-HHHHHhhCCC-eEEEEECCCCccc
Confidence            45677664 469999997 8887 6 78999999999999999  9999 99998 9999999999 999998765542 


Q ss_pred             --CcccccCCCCCCccccccccc-eEEEecHHHHHHHHHcCC--CCccccccccccccccccchhhhccccc-chhhhhh
Q 026937           89 --DSLVTLTHPRSGEISQCFASA-HVERLPFDEALQLVSNSK--NGDVVAYLQQQNDCFRDEYSVLGSDCDE-HIAWATE  162 (230)
Q Consensus        89 --d~~~~~~~~~~~~~~~~f~~~-~~~~m~~~efl~~~~~~~--~~~~~~Yl~~~~~~l~~~~~~L~~Di~~-~~p~~~~  162 (230)
                        +.....     +  ...|... ..+.|+|++|++.+.+..  .+...+||+++.  .....|.|.+|+.. +..|..+
T Consensus       102 y~d~~~~~-----~--~~~F~~~~~~~~m~~~efl~~~~~~~~~~~~~~~YL~~~~--~~~~~~~l~~D~~~~~~~~~~~  172 (349)
T 3d8c_A          102 YYDEKKMA-----N--FQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTL--NDTVGRKIVMDFLGFNWNWINK  172 (349)
T ss_dssp             CCCGGGTT-----S--CTTCCCSEEEEEECHHHHHHHHHHHHHHTCCCEEEEEEEC--CTTSCHHHHHHHHTSCHHHHHH
T ss_pred             cccccccc-----c--cccccccceeEeeEHHHHHHHHHhhcccCCCCCeeeeccc--ccccchhhhhhhhccchhhhhh
Confidence              111100     0  0123222 467999999999998742  123579998642  11122457777642 1123322


Q ss_pred             hh---CCCCC-ccEEEeeCCCCCCCccccCCCceEEEEEeEeEEEEeCCCCCCCCcceec
Q 026937          163 AL---GCYPE-AVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYV  218 (230)
Q Consensus       163 ~~---~~~~~-~~~lwiG~~gt~T~lH~D~~~N~~~qi~G~Kr~~LfpP~~~~~LY~~~~  218 (230)
                      ..   +..+. ..++|||++|++|++|+|+++||+|||.|+|+|+||||.+..+||+...
T Consensus       173 ~~~~~~~~~~~~~~l~iG~~gs~t~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~  232 (349)
T 3d8c_A          173 QQGKRGWGQLTSNLLLIGMEGNVTPAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPV  232 (349)
T ss_dssp             HHHHTTCCCEEECEEEEECTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCT
T ss_pred             hhhccccCccccceEEEECCCCCccceECChhcEEEEEeceEEEEEeCcchhhhhccccc
Confidence            21   11122 2469999999999999999999999999999999999999999998643

>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A

Probab=99.88  E-value=8e-23  Score=184.54  Aligned_cols=170  Identities=16%  Similarity=0.158  Sum_probs=120.4

Q ss_pred             CCcceeecC-CCCHHHHHHHhhcCCCcEEEEcCCCCCCCCc---cccCCChhhHHHHcCC-CCCEEEEeccCCCCCcccc
Q 026937           19 NSTIERLES-PPTPLQFLRDYVSQNKPCIIKNVSLHHQWPA---FSLWPHPSYLSKTLSS-SPPVSVHLSPNGRADSLVT   93 (230)
Q Consensus        19 ~~~I~ri~~-~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa---~~~Wt~~eyL~~~~G~-~~~V~v~~~~~g~~d~~~~   93 (230)
                      .+.|+|++. .+|. +|+++ ..+++||||+|+ .  +|+|   .++||. +||++++|+ . .|.|.       |..  
T Consensus        51 ~~~V~ri~~~~Ls~-EF~~~-~~~nkPVVIt~~-~--~Wpa~~P~~kWt~-dyL~~~~G~d~-~V~V~-------D~~--  114 (451)
T 2yu1_A           51 ANFVTFMEGKDFNV-EYIQR-GGLRDPLIFKNS-D--GLGIKMPDPDFTV-NDVKMCVGSRR-MVDVM-------DVN--  114 (451)
T ss_dssp             CCCCEECCGGGCSH-HHHHH-HCSCSCEEESSC-T--TTTCBCCCTTCCH-HHHHHHTCTTC-CCCCE-------ETT--
T ss_pred             CCceEecccccCCH-HHHHh-cCCCCcEEEccC-c--CCCCcCCcCCCCH-HHHHHHcCCCc-eEeeE-------EcC--
Confidence            469999997 7999 99888 789999999999 8  9999   889999 999999995 6 77764       110  


Q ss_pred             cCCCCCCccccccccceEEEecHHHHHHHHHcCCCCcccccccc----ccccccc--cchhhhcccc-cchhhhh-----
Q 026937           94 LTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQ----QNDCFRD--EYSVLGSDCD-EHIAWAT-----  161 (230)
Q Consensus        94 ~~~~~~~~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~----~~~~l~~--~~~~L~~Di~-~~~p~~~-----  161 (230)
                                    .....+|+|++|++++.+.......+|+..    .+..+..  ..|.|..|+. .+..|.+     
T Consensus       115 --------------~q~~~~M~l~eyidy~~~~~d~r~~LY~v~sLeF~~~~l~~~~~~P~l~~d~Dwv~~~~p~~l~~~  180 (451)
T 2yu1_A          115 --------------TQKGIEMTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES  180 (451)
T ss_dssp             --------------SSCCTTCCHHHHHHHHTSCTTTCCSCEEEEEECCTTSTTGGGCBCCHHHHHHCHHHHHSCGGGCC-
T ss_pred             --------------CCcceeeeHHHHHHHHhhccccccchhhhcccccccccccccccCchhhhhhhcccccCchhhhhh
Confidence                          011347999999999988754334677721    1112211  2355665542 1111221     


Q ss_pred             --hhhC-----CCCCc-cEEEeeCCCCCCCccccCCC--ceEEEEEeEeEEEEeCCCCCCC-Ccceec
Q 026937          162 --EALG-----CYPEA-VNLWIGNQLSETSFHKDHYE--NLYTVVSGQKHFLLLPPTDVHR-CGTVYV  218 (230)
Q Consensus       162 --~~~~-----~~~~~-~~lwiG~~gt~T~lH~D~~~--N~~~qi~G~Kr~~LfpP~~~~~-LY~~~~  218 (230)
                        +.++     ..|.. .++|||++||.|++|+|+..  |+++||.|+|+|+||||.+... +|+.+.
T Consensus       181 ~~d~f~~lge~~rP~~~r~~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~  248 (451)
T 2yu1_A          181 QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWL  248 (451)
T ss_dssp             ----------CCSCCCCCEEEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHH
T ss_pred             hhhhhhhcccccCCchheEEEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCccccccccccc
Confidence              1221     23444 89999999999999999865  7899999999999999999754 444433

>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*

Probab=99.82  E-value=4e-21  Score=169.01  Aligned_cols=167  Identities=16%  Similarity=0.179  Sum_probs=113.8

Q ss_pred             cceeecC-CCCHHHHHHHhhcCCCcEEEEcCC---CCCCCCccccCCChhhHHHHcC-CCCCEEEEeccCCCCCcccccC
Q 026937           21 TIERLES-PPTPLQFLRDYVSQNKPCIIKNVS---LHHQWPAFSLWPHPSYLSKTLS-SSPPVSVHLSPNGRADSLVTLT   95 (230)
Q Consensus        21 ~I~ri~~-~~s~~~F~~~y~~~~~PvVi~g~~---~~~~Wpa~~~Wt~~eyL~~~~G-~~~~V~v~~~~~g~~d~~~~~~   95 (230)
                      -|.++++ .++.+-|.+.  ..++||||++..   .  .||+. +|+. +|+++.+| +. .|+|.       |..    
T Consensus        18 ~v~~i~~~d~t~~y~~~~--~~~~Pvli~~~~glg~--~~P~~-~~tv-~~v~~~vG~d~-~V~Vi-------Dv~----   79 (371)
T 3k3o_A           18 VILKPTGNQLTVEFLEEN--SFSVPILVLKKDGLGM--TLPSP-SFTV-RDVEHYVGSDK-EIDVI-------DVT----   79 (371)
T ss_dssp             TSBCCCTTTCCHHHHHHH--TTCSCEEESSCTTSCC--BCCCT-TCCH-HHHHHHHCC-C-EEEEE-------ETT----
T ss_pred             hcccCChhhCcHHHHHhc--CCCCCEEEecCcccCC--cCCCC-CCCH-HHHHHHcCCCc-eEeee-------ecC----
Confidence            5667775 5666665443  348999999865   5  79987 9999 99999999 66 88885       110    


Q ss_pred             CCCCCccccccccceEEEecHHHHHHHHHcCCCCcccccccccc-c--cccc--cchhhhcccc-cchhhhhhhhCCCCC
Q 026937           96 HPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQN-D--CFRD--EYSVLGSDCD-EHIAWATEALGCYPE  169 (230)
Q Consensus        96 ~~~~~~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~-~--~l~~--~~~~L~~Di~-~~~p~~~~~~~~~~~  169 (230)
                                  +....+|+|++|++++.+... +..+|+-+.. +  .+..  +.|++..|+. ....|.++.+...|+
T Consensus        80 ------------~Q~~~~M~l~~y~dY~~~~~r-e~~lnv~d~efs~~~L~~~~~~P~~~~d~d~~~~~wp~~~~~~rP~  146 (371)
T 3k3o_A           80 ------------RQADCKMKLGDFVKYYYSGKR-EKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPN  146 (371)
T ss_dssp             ------------TTEEEEEEHHHHHHHHTCTTC-CSCEEEEEEECTTSGGGGTCBCCHHHHHHCHHHHHSCSSCSSCCCC
T ss_pred             ------------cCCCccccHHHHHHHHhccCC-CCceeeechhccchhhhccccCCchhhhhhhhhhcCChhhhccCCC
Confidence                        123568999999999988743 3578885421 0  0111  2344554432 001121222333454


Q ss_pred             -ccEEEeeCCCCCCCccccCCCc--eEEEEEeEeEEEEeCCCCCCC-Ccceec
Q 026937          170 -AVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVHR-CGTVYV  218 (230)
Q Consensus       170 -~~~lwiG~~gt~T~lH~D~~~N--~~~qi~G~Kr~~LfpP~~~~~-LY~~~~  218 (230)
                       ..++|||++||.|++|+|+..|  +++||.|+|+|+||||.+.+. +|..+.
T Consensus       147 ~~r~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~  199 (371)
T 3k3o_A          147 VQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWS  199 (371)
T ss_dssp             CSCEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHH
T ss_pred             ceeEEEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccc
Confidence             5899999999999999999887  689999999999999998743 555443

>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*

Probab=99.80  E-value=5.3e-20  Score=162.82  Aligned_cols=172  Identities=20%  Similarity=0.275  Sum_probs=116.8

Q ss_pred             HHHHhhhccCCCCC-cceeecCCCCHHHHHHHhhcC---CCcEEEEcCC---CCCCCCccccCCChhhHHHHcC-CCCCE
Q 026937            7 LWDEVRELSLGSNS-TIERLESPPTPLQFLRDYVSQ---NKPCIIKNVS---LHHQWPAFSLWPHPSYLSKTLS-SSPPV   78 (230)
Q Consensus         7 ~~~~~~~~~~~~~~-~I~ri~~~~s~~~F~~~y~~~---~~PvVi~g~~---~~~~Wpa~~~Wt~~eyL~~~~G-~~~~V   78 (230)
                      ++.+.+.-.+++.. -|.+++    .++|..+|+.+   ++|+||++..   .  .||+ .+|+. +|+++.+| +. .|
T Consensus        30 fi~~~~~~~~~~~~~~v~~~~----g~~f~~~yl~~~g~~~Pvli~~~~glgm--~~P~-~~~tv-~~v~~~vG~d~-~V  100 (392)
T 3pua_A           30 FIKELRSRTFPSAEDVVARVP----GSQLTLGYMEEHGFTEPILVPKKDGLGL--AVPA-PTFYV-SDVENYVGPER-SV  100 (392)
T ss_dssp             HHHHHHHCCCCBGGGTSEECC----GGGCCHHHHHHHTTCSCEEESSCTTTTC--BCCC-TTCCH-HHHHHHHCTTC-EE
T ss_pred             HHHHHHhCCCCChHHeEecCC----hhhchHHHHHhcCCCccEEEeCCccccC--cCCC-CCCCH-HHHHHHcCCCc-EE
Confidence            33444333344322 344555    44555555555   9999999865   5  7998 79999 99999999 66 88


Q ss_pred             EEEeccCCCCCcccccCCCCCCccccccccceEEEecHHHHHHHHHcCCCCcccccccccc---ccccc--cchhhhccc
Q 026937           79 SVHLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQN---DCFRD--EYSVLGSDC  153 (230)
Q Consensus        79 ~v~~~~~g~~d~~~~~~~~~~~~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~---~~l~~--~~~~L~~Di  153 (230)
                      +|.       |..                +....+|+|++|++++.+... +..+|+-+..   ..+..  +.|++..|+
T Consensus       101 ~Vi-------Dv~----------------~Q~~~~M~l~~yv~Y~~~~~r-e~~lnv~dlefs~t~L~~~~~~P~lv~d~  156 (392)
T 3pua_A          101 DVT-------DVT----------------KQKDCKMKLKEFVDYYYSTNR-KRVLNVTNLEFSDTRMSSFVEPPDIVKKL  156 (392)
T ss_dssp             EEE-------ETT----------------TTEEEEEEHHHHHHHHTCSSC-CSCEEEEEEECTTSGGGGGCBCCHHHHHH
T ss_pred             eee-------ecC----------------cCcCccccHHHHHHHHhccCC-CcceEeeecccccchhhccccCchhhhhh
Confidence            885       111                123568999999999998743 4578886521   00111  345666665


Q ss_pred             c-cchhhhhhhhCCCCC-ccEEEeeCCCCCCCccccCCCc--eEEEEEeEeEEEEeCCCCCC
Q 026937          154 D-EHIAWATEALGCYPE-AVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVH  211 (230)
Q Consensus       154 ~-~~~p~~~~~~~~~~~-~~~lwiG~~gt~T~lH~D~~~N--~~~qi~G~Kr~~LfpP~~~~  211 (230)
                      . .+..|.++.+...|+ ..++|||++||.|++|+|...+  ++++|.|+|+|+||||.+..
T Consensus       157 d~v~~~wp~~~~~~rP~v~r~~~mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~n  218 (392)
T 3pua_A          157 SWVENYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASAN  218 (392)
T ss_dssp             CHHHHHSCTTCSSCCCSCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHH
T ss_pred             hhhhhccchhhhhcCCCceeEEEEeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCccc
Confidence            3 111233333444555 7899999999999999998764  79999999999999998863

>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*

Probab=99.78  E-value=6e-19  Score=156.46  Aligned_cols=165  Identities=17%  Similarity=0.216  Sum_probs=114.1

Q ss_pred             CcceeecC-CCCHHHHHHHhhcCCCcEEEEcCCC-CCCCCccccCCChhhHHHHcC-CCCCEEEEeccCCCCCcccccCC
Q 026937           20 STIERLES-PPTPLQFLRDYVSQNKPCIIKNVSL-HHQWPAFSLWPHPSYLSKTLS-SSPPVSVHLSPNGRADSLVTLTH   96 (230)
Q Consensus        20 ~~I~ri~~-~~s~~~F~~~y~~~~~PvVi~g~~~-~~~Wpa~~~Wt~~eyL~~~~G-~~~~V~v~~~~~g~~d~~~~~~~   96 (230)
                      ..|.++++ .++.+-|.+.  ..++||||++... +-.||+ .+|+. +|+++.+| +. .|+|.       |..     
T Consensus        45 ~~v~~i~g~d~t~~y~~~~--~~~~Pvli~~~~glg~~~P~-~~~tv-~~v~~~vG~d~-~V~Vi-------Dv~-----  107 (397)
T 3kv9_A           45 EIIIKMHGSQLTQRYLEKH--GFDVPIMVPKLDDLGLRLPS-PTFSV-MDVERYVGGDK-VIDVI-------DVA-----  107 (397)
T ss_dssp             GTCEECCTTTCCHHHHHHH--CSCSCEEESSCTTSCCBCCC-TTCCH-HHHHHHHTTTS-EEEEE-------ETT-----
T ss_pred             HeeecCCHHHhhHHHHHhc--CCCCcEEEecCccccCcCCC-CCCCH-HHHHHHhCCCc-eEeee-------ecC-----
Confidence            36888887 6888765443  4689999998651 117999 89999 99999999 66 88885       111     


Q ss_pred             CCCCccccccccceEEEecHHHHHHHHHcCCCCccccccccccccccccchhhhcccccch-----hhhhhh-----hCC
Q 026937           97 PRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHI-----AWATEA-----LGC  166 (230)
Q Consensus        97 ~~~~~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~~~L~~Di~~~~-----p~~~~~-----~~~  166 (230)
                                 +....+|+|++|++++.+... ...+|+-+..  +.. . .|.+++..|-     .|...+     +..
T Consensus       108 -----------~Q~~~~M~l~~yv~Y~~~~~r-~~~lnvisle--fs~-~-~L~~~~~~P~~v~d~Dwv~~~wp~~~~~~  171 (397)
T 3kv9_A          108 -----------RQADSKMTLHNYVKYFMNPNR-PKVLNVISLE--FSD-T-KMSELVEVPDIAKKLSWVENYWPDDSVFP  171 (397)
T ss_dssp             -----------TTEEEEEEHHHHHHHHHCSSC-SSCEEEEEEE--CTT-S-GGGGGCBCCHHHHHHCHHHHHCCTTCSSC
T ss_pred             -----------cccCccccHHHHHHHHhccCC-Cccceecchh--hcc-c-hhccCcCCCceeeccchhhhcCCchhccC
Confidence                       123568999999999998743 3466765431  211 1 2444433221     121222     112


Q ss_pred             CC-CccEEEeeCCCCCCCccccCCCc--eEEEEEeEeEEEEeCCCCCC-CCccee
Q 026937          167 YP-EAVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVH-RCGTVY  217 (230)
Q Consensus       167 ~~-~~~~lwiG~~gt~T~lH~D~~~N--~~~qi~G~Kr~~LfpP~~~~-~LY~~~  217 (230)
                      .| ...++|||++||.|++|+|+..+  +++||.|+|+|+||||.+.+ .+|..+
T Consensus       172 rP~v~r~l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~  226 (397)
T 3kv9_A          172 KPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESW  226 (397)
T ss_dssp             CCCCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHH
T ss_pred             CccceeEEEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCccccccccccc
Confidence            23 25799999999999999999887  78999999999999999764 455543

>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*

Probab=99.76  E-value=5.1e-19  Score=161.61  Aligned_cols=164  Identities=17%  Similarity=0.209  Sum_probs=111.3

Q ss_pred             cceeecC-CCCHHHHHHHhhcCCCcEEEEcCCC-CCCCCccccCCChhhHHHHcC-CCCCEEEEeccCCCCCcccccCCC
Q 026937           21 TIERLES-PPTPLQFLRDYVSQNKPCIIKNVSL-HHQWPAFSLWPHPSYLSKTLS-SSPPVSVHLSPNGRADSLVTLTHP   97 (230)
Q Consensus        21 ~I~ri~~-~~s~~~F~~~y~~~~~PvVi~g~~~-~~~Wpa~~~Wt~~eyL~~~~G-~~~~V~v~~~~~g~~d~~~~~~~~   97 (230)
                      .|.++++ .++.+-|.+.  ..++||||++... +-.||+ .+|+. +|+++.+| +. .|+|.       |..      
T Consensus       137 ~v~~~~~~~~~~~~~~~~--~~~~Pvli~~~~~lg~~~P~-~~~t~-~~v~~~~G~d~-~V~V~-------Dv~------  198 (488)
T 3kv5_D          137 IIIKMHGSQLTQRYLEKH--GFDVPIMVPKLDDLGLRLPS-PTFSV-MDVERYVGGDK-VIDVI-------DVA------  198 (488)
T ss_dssp             TCEECCGGGCCHHHHHHH--CSCSCEEECSCTTTCCBCCC-TTCCH-HHHHHHHCTTC-EEEEE-------ETT------
T ss_pred             eeeccccccchHHHHHhc--CCCCCEEEecCCCcCCcCCC-CCCcH-HHHHHHhCCCc-eeeee-------ecC------
Confidence            5677765 5666655433  2599999998751 116999 89999 99999999 66 88885       111      


Q ss_pred             CCCccccccccceEEEecHHHHHHHHHcCCCCccccccccccccccccchhhhcccccchh-----hhhhh-----hCCC
Q 026937           98 RSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIA-----WATEA-----LGCY  167 (230)
Q Consensus        98 ~~~~~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~~~L~~Di~~~~p-----~~~~~-----~~~~  167 (230)
                                +....+|+|++|++++.+... ...+|+-+..  +.. . +|.+++..|.-     |...+     ....
T Consensus       199 ----------~Q~~~~m~l~~yi~y~~~~~r-~~~~nv~sle--fs~-~-~L~~~~~~P~~~~~~d~~~~~wp~~~~~~r  263 (488)
T 3kv5_D          199 ----------RQADSKMTLHNYVKYFMNPNR-PKVLNVISLE--FSD-T-KMSELVEVPDIAKKLSWVENYWPDDSVFPK  263 (488)
T ss_dssp             ----------TTEEEEEEHHHHHHHHHSSSC-SSCEEEEEEE--CTT-S-GGGGGCBCCHHHHHHCHHHHHCCTTCSSCC
T ss_pred             ----------ccccccccHHHHHHHHhccCC-cccccccccc--ccc-c-hhhccCCCChhhhhhchhhhcCcccccccC
Confidence                      123568999999999998643 3456665432  211 1 25555543211     11111     1112


Q ss_pred             CC-ccEEEeeCCCCCCCccccCCCc--eEEEEEeEeEEEEeCCCCCC-CCccee
Q 026937          168 PE-AVNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVH-RCGTVY  217 (230)
Q Consensus       168 ~~-~~~lwiG~~gt~T~lH~D~~~N--~~~qi~G~Kr~~LfpP~~~~-~LY~~~  217 (230)
                      |. ..++|||++||.|++|+|++.|  +++||.|+|+|+||||.+.+ .+|..+
T Consensus       264 P~~~r~~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~  317 (488)
T 3kv5_D          264 PFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESW  317 (488)
T ss_dssp             CCCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHH
T ss_pred             cccceEEEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCccccccccccc
Confidence            22 5789999999999999999988  67999999999999998754 355443

>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}

Probab=99.73  E-value=1.1e-17  Score=150.93  Aligned_cols=150  Identities=18%  Similarity=0.248  Sum_probs=106.5

Q ss_pred             CCHHHHHHHhhcC---CCcEEEEcCC---CCCCCCccccCCChhhHHHHcC-CCCCEEEEeccCCCCCcccccCCCCCCc
Q 026937           29 PTPLQFLRDYVSQ---NKPCIIKNVS---LHHQWPAFSLWPHPSYLSKTLS-SSPPVSVHLSPNGRADSLVTLTHPRSGE  101 (230)
Q Consensus        29 ~s~~~F~~~y~~~---~~PvVi~g~~---~~~~Wpa~~~Wt~~eyL~~~~G-~~~~V~v~~~~~g~~d~~~~~~~~~~~~  101 (230)
                      ++.++|..+|+.+   ++||||++..   .  .||+. +|+. +++++.+| +. .|+|.       |..          
T Consensus       106 ~~g~~~~~~~~~~~~~~~Pvli~~~~glgm--~~P~~-~~tv-~~v~~~~G~d~-~V~Vi-------Dv~----------  163 (447)
T 3kv4_A          106 PTGNQLTVEFLEENSFSVPILVLKKDGLGM--TLPSP-SFTV-RDVEHYVGSDK-EIDVI-------DVT----------  163 (447)
T ss_dssp             CCTTTCCHHHHHHTTSCSCEEESSCTTSCC--BCCCT-TCCH-HHHHHHHCTTC-EEEEE-------ETT----------
T ss_pred             cchhhchHHHHHhcCCCCCEEEecCcccCC--cCCCc-cCCH-HHHHHHcCCCc-eEcce-------ecC----------
Confidence            4455555555555   9999999654   5  79986 8999 99999999 66 88885       110          


Q ss_pred             cccccccceEEEecHHHHHHHHHcCCCCccccccccccccccccchhhhcccccchhhh-----h-----hhhCCCCC-c
Q 026937          102 ISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWA-----T-----EALGCYPE-A  170 (230)
Q Consensus       102 ~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~~~L~~Di~~~~p~~-----~-----~~~~~~~~-~  170 (230)
                            +....+|+|++|++++.+... +..+|+-+..  +.+ . .|.+++..|--+.     .     +.+...|. .
T Consensus       164 ------~Q~~~~M~l~~y~dy~~~~~r-~~~lnv~d~e--fs~-~-~L~~~~~~P~~~~~~D~~~~lw~~~~~~~rP~v~  232 (447)
T 3kv4_A          164 ------RQADCKMKLGDFVKYYYSGKR-EKVLNVISLE--FSD-T-RLSNLVETPKIVRKLSWVENLWPEECVFERPNVQ  232 (447)
T ss_dssp             ------TTEEEEEEHHHHHHHHHSSCC-SSCEEEEEEE--CTT-S-GGGGGCBCCHHHHHHCHHHHHCCSCTTSCCCCCS
T ss_pred             ------cCccccccHHHHHHHHhccCC-CCceeecccc--ccc-c-hhhhccCCCceecccchhhhcccchhhccCCCce
Confidence                  124568999999999998743 3578885421  211 1 3555555332121     1     11223454 7


Q ss_pred             cEEEeeCCCCCCCccccCCCc--eEEEEEeEeEEEEeCCCCCC
Q 026937          171 VNLWIGNQLSETSFHKDHYEN--LYTVVSGQKHFLLLPPTDVH  211 (230)
Q Consensus       171 ~~lwiG~~gt~T~lH~D~~~N--~~~qi~G~Kr~~LfpP~~~~  211 (230)
                      .++|||++||.|++|+|+..+  ++++|.|+|+|+||||.+..
T Consensus       233 r~~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~n  275 (447)
T 3kv4_A          233 KYCLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNAN  275 (447)
T ss_dssp             CEEEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHH
T ss_pred             eEEEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCccc
Confidence            899999999999999999887  78999999999999999753

>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11

Probab=99.73  E-value=6.4e-18  Score=148.60  Aligned_cols=158  Identities=15%  Similarity=0.098  Sum_probs=100.2

Q ss_pred             eecCCCCHHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCC--CCEEEEeccCCCCCcccccCCCCCCc
Q 026937           24 RLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSS--PPVSVHLSPNGRADSLVTLTHPRSGE  101 (230)
Q Consensus        24 ri~~~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~--~~V~v~~~~~g~~d~~~~~~~~~~~~  101 (230)
                      ++. .+|+++|.++|. .++||||+++ .  +|- ...|+. ++|.+.+++.  ....|++. .+....           
T Consensus        24 ll~-~is~e~F~~~yw-~kkPlvir~~-~--~~~-~~l~s~-~~L~~l~~~~~v~~~~vrl~-~~~~~~-----------   84 (342)
T 1vrb_A           24 IIS-PVTMSEFLEEYW-PVKPLVARGE-V--ERF-TSIPGF-EKVRTLENVLAIYNNPVMVV-GDAVIE-----------   84 (342)
T ss_dssp             HHT-TSCHHHHHHHTT-TTSCEEECCC-G--GGG-GGSTTC-GGGSSHHHHHHHCCSCEEEC------------------
T ss_pred             HHc-CCCHHHHHHHHh-ccCCEEEcCC-c--ccc-cCCCCH-HHHHHHHhhcCcCcCceEEe-CCCcCc-----------
Confidence            445 499999999999 7899999999 6  761 246776 6666555432  01223322 111100           


Q ss_pred             cccccccceEE-EecHHHHHHHHHcCCCCccccccccccccccccchhhhcccccchhhhhhhhCCCCCccE----EEee
Q 026937          102 ISQCFASAHVE-RLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVN----LWIG  176 (230)
Q Consensus       102 ~~~~f~~~~~~-~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~~~L~~Di~~~~p~~~~~~~~~~~~~~----lwiG  176 (230)
                       +. |.. ... .+++++|.+...++    ..+++...+. ...++.+|.+++..       .++. ....+    +|+|
T Consensus        85 -~~-~~~-~~g~~~~~~~~~~l~~~g----~tl~v~~~~~-~~p~l~~l~~~~~~-------~~~~-~~~~n~~~~~~~g  148 (342)
T 1vrb_A           85 -ES-EGI-TDRFLVSPAEALEWYEKG----AALEFDFTDL-FIPQVRRWIEKLKA-------ELRL-PAGTSSKAIVYAA  148 (342)
T ss_dssp             ----------CEEECHHHHHHHHHTT----CCEEECCGGG-TCTHHHHHHHHHHH-------HTTC-CTTCCEEEEEEEE
T ss_pred             -cc-ccc-CCCcccCHHHHHHHHhCC----CeEEECChhH-hChHHHHHHHhhhh-------hcCC-cccccccceEEEe
Confidence             01 111 122 67889997766543    3466654332 23444456655531       1221 12334    9999


Q ss_pred             CCCCCCCccccCCCceEEEEEeEeEEEEe-CCCCCCCCcce
Q 026937          177 NQLSETSFHKDHYENLYTVVSGQKHFLLL-PPTDVHRCGTV  216 (230)
Q Consensus       177 ~~gt~T~lH~D~~~N~~~qi~G~Kr~~Lf-pP~~~~~LY~~  216 (230)
                      ++|++|++|+|.++||+|||.|+|||+|| ||.+...||+.
T Consensus       149 p~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~  189 (342)
T 1vrb_A          149 KNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHY  189 (342)
T ss_dssp             CSSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCE
T ss_pred             CCCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcc
Confidence            99999999999999999999999999999 99988888873

>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}

Probab=99.44  E-value=2.5e-14  Score=129.36  Aligned_cols=152  Identities=16%  Similarity=0.148  Sum_probs=81.3

Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcCCCCCC-CCccc-cCCChhhHHHHcCCCCCEEEE-eccCCCCCcccccCCCCCCcccc
Q 026937           28 PPTPLQFLRDYVSQNKPCIIKNVSLHHQ-WPAFS-LWPHPSYLSKTLSSSPPVSVH-LSPNGRADSLVTLTHPRSGEISQ  104 (230)
Q Consensus        28 ~~s~~~F~~~y~~~~~PvVi~g~~~~~~-Wpa~~-~Wt~~eyL~~~~G~~~~V~v~-~~~~g~~d~~~~~~~~~~~~~~~  104 (230)
                      ++|.++|+++|.. ++|++|++...  + |+++. .|+. ++|.+..+.. .+.-. +......+..           ..
T Consensus        25 ~is~e~F~~~yw~-kkPllIr~~~~--~~~~~f~~l~s~-~~L~~La~~~-~v~~~~v~~~r~~~g~-----------~~   88 (442)
T 2xdv_A           25 PIKTETFFKEFWE-QKPLLIQRDDP--ALATYYGSLFKL-TDLKSLCSRG-MYYGRDVNVCRCVNGK-----------KK   88 (442)
T ss_dssp             TSCHHHHHHHTTT-TSCEEECCCCH--HHHHHHHHHCCH-HHHSSCC---------------------------------
T ss_pred             CCCHHHHHHHhhh-hCcEEeecCCc--chhhhhcCcCCH-HHHHHHHccC-cccccccceeeecCCc-----------ce
Confidence            5999999999985 78999999876  5 98885 5777 9998887754 33211 1000000000           00


Q ss_pred             ccccceEEEecHHHHHHHHHcCCCCccccccccccccccccchhhhcccccchhhhhhhhCCCCCccEEEeeCCCCCC-C
Q 026937          105 CFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSET-S  183 (230)
Q Consensus       105 ~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~~~L~~Di~~~~p~~~~~~~~~~~~~~lwiG~~gt~T-~  183 (230)
                      ++ . .....++.++.+.+...   +..+-+.+    +....|+|.. +..   .+...++. ....|+|+|++|+++ +
T Consensus        89 ~~-~-~~g~~~~~~l~~~~~~~---g~tL~l~~----~~~~~p~L~~-l~~---~l~~~~g~-~~~~n~y~~~~g~~g~~  154 (442)
T 2xdv_A           89 VL-N-KDGKAHFLQLRKDFDQK---RATIQFHQ----PQRFKDELWR-IQE---KLECYFGS-LVGSNVYITPAGSQGLP  154 (442)
T ss_dssp             ----------------CCEEEE---TTEEEEEC----GGGTCHHHHH-HHH---HHHHHHTS-CCEEEEEEECTTCBCSC
T ss_pred             ee-c-CCCccCHHHHHHHhccC---CcEEEeCc----hhhhhhHHHH-HHH---HHHHHhCC-CcccceEECCCCCCCcc
Confidence            00 0 00011122221111111   01111111    1122233321 110   01123453 446899999999987 9


Q ss_pred             ccccCCCceEEEEEeEeEEEEeCCCC
Q 026937          184 FHKDHYENLYTVVSGQKHFLLLPPTD  209 (230)
Q Consensus       184 lH~D~~~N~~~qi~G~Kr~~LfpP~~  209 (230)
                      +|||.++||++||.|+|||+||+|.+
T Consensus       155 ~H~D~~dvf~~Qv~G~Krw~l~~p~~  180 (442)
T 2xdv_A          155 PHYDDVEVFILQLEGEKHWRLYHPTV  180 (442)
T ss_dssp             SEECSSEEEEEEEESCEEEEEECCSS
T ss_pred             ceECCcceEEEEEEeEEEEEEccCCC
Confidence            99999999999999999999999986

>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}

Probab=99.18  E-value=1.1e-10  Score=105.81  Aligned_cols=54  Identities=17%  Similarity=0.217  Sum_probs=45.4

Q ss_pred             hhCCCCCccEEEeeCCCCCC-CccccCCCceEEEEEeEeEEEEeCCCCCCCCccee
Q 026937          163 ALGCYPEAVNLWIGNQLSET-SFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVY  217 (230)
Q Consensus       163 ~~~~~~~~~~lwiG~~gt~T-~lH~D~~~N~~~qi~G~Kr~~LfpP~~~~~LY~~~  217 (230)
                      .|+. ....|+|++++|+.+ ++|||.++||++||.|+|+|+||+|.+...++|..
T Consensus       159 ~fg~-~v~~N~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~  213 (489)
T 4diq_A          159 QFGS-MAGSNVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALT  213 (489)
T ss_dssp             HHTS-CEEEEEEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSS
T ss_pred             HhCC-cccceEEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCc
Confidence            4553 346799999999976 99999999999999999999999999876656543

>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*

Probab=98.90  E-value=1.6e-08  Score=92.10  Aligned_cols=157  Identities=18%  Similarity=0.242  Sum_probs=93.2

Q ss_pred             CCHHHHHHHhhcC------CCcEEEEcCCC-CCCCCccccCCChhhHHHHcCCCCCEEEEeccCCCCCcccccCCCCCCc
Q 026937           29 PTPLQFLRDYVSQ------NKPCIIKNVSL-HHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGE  101 (230)
Q Consensus        29 ~s~~~F~~~y~~~------~~PvVi~g~~~-~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~~~~~g~~d~~~~~~~~~~~~  101 (230)
                      .+..+|..+|...      .+|++|++... +-.-|. ...+. +.+.+..|..+.|.|-       |..          
T Consensus       151 ~dG~~f~~~~~~~~g~~~f~~p~lv~~~dgLgm~~P~-~~ftv-~dV~~~vG~d~~VdVI-------DV~----------  211 (528)
T 3pur_A          151 EDGYEFRREFEKLGGADNWGKVFMVKDMDGLNMTMPK-PGFDL-EDVVKIMGSDYEVDTI-------DVY----------  211 (528)
T ss_dssp             EEHHHHHHHHHHTTCGGGCCSEEEEEECTTSCCCCCC-TTCCH-HHHHHHHCTTCEEEEE-------ETT----------
T ss_pred             cCchhhHHHHHhhcCcccCCeeEEEeccccCCCCCCC-CCCCH-HHHHHhhCCCceEeeE-------ECC----------
Confidence            4567887777654      36999995432 002332 13444 7888888854377774       211          


Q ss_pred             cccccccceEEEecHHHHHHHHHcCCCCcccccccccc-cc---ccc--cchhhhccccc-chhhhhh------------
Q 026937          102 ISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQN-DC---FRD--EYSVLGSDCDE-HIAWATE------------  162 (230)
Q Consensus       102 ~~~~f~~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~-~~---l~~--~~~~L~~Di~~-~~p~~~~------------  162 (230)
                            ......|+|++|++++.+.......+++-+.. +.   |..  +.|.+..++.- ..-|...            
T Consensus       212 ------tQ~~~~mtl~~~~~yf~~~~~R~~i~NviSLEfS~~~~L~~~v~~P~~Vr~ld~v~~~Wp~~~~~~~~~~~~~~  285 (528)
T 3pur_A          212 ------NQSTYSMKLDTFRKLFRDTKNRPLLYNFLSLEFSDNNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIKLLQRE  285 (528)
T ss_dssp             ------TTEEEEEEHHHHHHHHHCCSCCSSCEEECCEECTTSTTHHHHSCCCHHHHHHCHHHHHSCCC------------
T ss_pred             ------CCCCCcCcHHHHHHHhcCccccceeeEEeeEEecCchhhhccccCCcEEecccHHHHhcCcccchhhhhhhhcc
Confidence                  12356899999999999853333345553321 00   110  11222222110 0001000            


Q ss_pred             -hh--CCCCC-ccEEEeeCCCCCCCccccCCC--ceEEEEEeEeEEEEeCCCCC
Q 026937          163 -AL--GCYPE-AVNLWIGNQLSETSFHKDHYE--NLYTVVSGQKHFLLLPPTDV  210 (230)
Q Consensus       163 -~~--~~~~~-~~~lwiG~~gt~T~lH~D~~~--N~~~qi~G~Kr~~LfpP~~~  210 (230)
                       .+  ...|. ..+++||++|+.|.+|+|...  ++++++.|+|+|+||||.+.
T Consensus       286 ~~~~~~~rP~v~rf~lmg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~  339 (528)
T 3pur_A          286 EYLPEDQRPKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQ  339 (528)
T ss_dssp             -CCCGGGSCCCSSEEEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHH
T ss_pred             cccccccCCCeeEEEEEeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCcc
Confidence             00  01233 488999999999999999876  47899999999999999864

>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}

Probab=96.26  E-value=0.0023  Score=56.13  Aligned_cols=148  Identities=16%  Similarity=0.188  Sum_probs=83.3

Q ss_pred             CcceeecC---CCCHHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCCCCEEEEeccCCCCCcccccCC
Q 026937           20 STIERLES---PPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTH   96 (230)
Q Consensus        20 ~~I~ri~~---~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~~~~~g~~d~~~~~~~   96 (230)
                      +.+-++..   .-....|.+ +-..++|||++|+..  .-. ...|++ ++|.+.+|+. .+.+-       +..     
T Consensus        10 ~~lL~L~d~~~~~n~~~Fq~-hW~~GePViVs~V~~--~~~-~~~W~P-e~~~~~~gd~-~~~li-------dC~-----   71 (392)
T 2ypd_A           10 KHILWLKDYKNSSNWKLFKE-CWKQGQPAVVSGVHK--KMN-ISLWKA-ESISLDFGDH-QADLL-------NCK-----   71 (392)
T ss_dssp             TTEEEECCTTCTTHHHHHHH-HHTTTCCEEECCHHH--HSC-GGGGSH-HHHHHHHTTS-CCCCE-------ETT-----
T ss_pred             CceeEecCCCCcccHHHHHH-HHhCCCcEEEechhh--hCc-CCccCH-HHHHHHhcCc-eeeee-------eCC-----
Confidence            35556654   123457855 556899999999976  322 257999 9999999998 55442       111     


Q ss_pred             CCCCccccccccceEEEecHHHHHHHHHcCCC-----C--cccccccccc--ccccccchhhhcccccchhhhhhhh---
Q 026937           97 PRSGEISQCFASAHVERLPFDEALQLVSNSKN-----G--DVVAYLQQQN--DCFRDEYSVLGSDCDEHIAWATEAL---  164 (230)
Q Consensus        97 ~~~~~~~~~f~~~~~~~m~~~efl~~~~~~~~-----~--~~~~Yl~~~~--~~l~~~~~~L~~Di~~~~p~~~~~~---  164 (230)
                                 ++....+++.+|.+-+.....     +  ...+-|..+.  +.+.+.+|...+|+...+|+. ++.   
T Consensus        72 -----------~~~~~~i~v~~Ff~Gf~~~~~r~~~~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlp-EYt~p~  139 (392)
T 2ypd_A           72 -----------DSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLP-EYCNPE  139 (392)
T ss_dssp             -----------TCCBCSCCHHHHHHTSSBGGGC------CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSH-HHHSTT
T ss_pred             -----------CCccccCcHHHHhhhccccccCCcCCCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCch-HhhCCC
Confidence                       122446889999998765321     1  1223333221  112222455555654333432 332   


Q ss_pred             CC------C------CC-ccEEEeeCC--------CCCCCccccCCCceEEEEE
Q 026937          165 GC------Y------PE-AVNLWIGNQ--------LSETSFHKDHYENLYTVVS  197 (230)
Q Consensus       165 ~~------~------~~-~~~lwiG~~--------gt~T~lH~D~~~N~~~qi~  197 (230)
                      |.      .      |+ .+.++|+.+        -++|.||.|..|.++++++
T Consensus       140 G~LNLAs~LP~~~~kPDLGPK~YiAYG~~~~~~~~~gvT~LH~DmsDaVNiL~h  193 (392)
T 2ypd_A          140 GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVY  193 (392)
T ss_dssp             CTTCCTTTSCGGGCC---CCEEEEECCSTTTTCTTCCSEEEEECSSEEEEEEEE
T ss_pred             ccchHHHhCCCCCCCCCCCcchhhhcCcchhcccCCCcceeeeehhhhhhhhhe
Confidence            10      1      12 466777432        3589999999986555544

>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}

Probab=93.03  E-value=0.75  Score=39.61  Aligned_cols=41  Identities=15%  Similarity=0.202  Sum_probs=32.7

Q ss_pred             ccEEEeeCCCCCCCccccCCC--ceEEEEE-eEeEEEEeCCCCC
Q 026937          170 AVNLWIGNQLSETSFHKDHYE--NLYTVVS-GQKHFLLLPPTDV  210 (230)
Q Consensus       170 ~~~lwiG~~gt~T~lH~D~~~--N~~~qi~-G~Kr~~LfpP~~~  210 (230)
                      .+.|.||..|+.|+.|.+..+  .++.++- |.|.|.-.|++..
T Consensus       202 ~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~  245 (332)
T 2xxz_A          202 TVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYW  245 (332)
T ss_dssp             SEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGH
T ss_pred             hhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHH
Confidence            578999999999999998654  4444554 7888999998754

>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*

Probab=90.24  E-value=2.8  Score=38.36  Aligned_cols=41  Identities=17%  Similarity=0.290  Sum_probs=32.7

Q ss_pred             ccEEEeeCCCCCCCccccCCC--ceEEEEE-eEeEEEEeCCCCC
Q 026937          170 AVNLWIGNQLSETSFHKDHYE--NLYTVVS-GQKHFLLLPPTDV  210 (230)
Q Consensus       170 ~~~lwiG~~gt~T~lH~D~~~--N~~~qi~-G~Kr~~LfpP~~~  210 (230)
                      .++|.||..|+.|+.|.+..+  .++.++. |.|.|...|+++.
T Consensus       261 ~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~  304 (531)
T 3avr_A          261 TVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYW  304 (531)
T ss_dssp             SCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGH
T ss_pred             hhheEeecCcccccceecCCcceeeEeecCCCCeEEEEeCHHHH
Confidence            578999999999999999664  3444554 5888999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	230
d1h2ka_	335	b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibit	1e-17
d1vrba1	319	b.82.2.11 (A:8-326) Putative asparaginyl hydroxyla	2e-10

>d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1) {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Hypoxia-inducible factor HIF ihhibitor (FIH1)
domain: Hypoxia-inducible factor HIF ihhibitor (FIH1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.1 bits (191), Expect = 1e-17
 Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 16/198 (8%)

Query: 21  TIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSV 80
            I RL           + +   +P ++ + +L   +PA   W    YL + + +    SV
Sbjct: 27  PIPRLSQSD---PRAEELIENEEPVVLTDTNLV--YPALK-W-DLEYLQENIGNGD-FSV 78

Query: 81  HLSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDV-VAYLQQQN 139
           + +   +          +          ++ E + F E ++ + + +          QQ 
Sbjct: 79  YSASTHKFL---YYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQT 135

Query: 140 DCFRDEYSVLGSDCDEHIAWATEALGC----YPEAVNLWIGNQLSETSFHKDHYENLYTV 195
                   ++      +  W  +  G        +  L IG + + T  H D  +N +  
Sbjct: 136 LNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQ 195

Query: 196 VSGQKHFLLLPPTDVHRC 213
           + G K  +L PP      
Sbjct: 196 IKGYKRCILFPPDQFECL 213

>d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]} Length = 319

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Asparaginyl hydroxylase-like
domain: Putative asparaginyl hydroxylase YxbC
species: Bacillus subtilis [TaxId: 1423]

 Score = 57.6 bits (138), Expect = 2e-10
 Identities = 26/190 (13%), Positives = 48/190 (25%), Gaps = 27/190 (14%)

Query: 22  IERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVH 81
           +E + SP T  +FL +Y    KP + +       + +   +     L   L+      + 
Sbjct: 2   LESIISPVTMSEFLEEYW-PVKPLVARGEVER--FTSIPGFEKVRTLENVLAIYNNPVMV 58

Query: 82  LSPNGRADSLVTLTHPRSGEISQCFASAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDC 141
           +      +S                    V      E  +           A      D 
Sbjct: 59  VGDAVIEES------------EGITDRFLVSPAEALEWYE--------KGAALEFDFTDL 98

Query: 142 FRDEYSVLGSDCDEHIAWATEALGCYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKH 201
           F  +           +               ++          H D Y NL   + G+K 
Sbjct: 99  FIPQVRRWIEKLKAELRLPAGT----SSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKT 154

Query: 202 FLLLPPTDVH 211
           + L    +V 
Sbjct: 155 WKLAKNENVS 164

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	230
d1h2ka_	335	Hypoxia-inducible factor HIF ihhibitor (FIH1) {Hum	99.95
d1vrba1	319	Putative asparaginyl hydroxylase YxbC {Bacillus su	99.82

>d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Hypoxia-inducible factor HIF ihhibitor (FIH1)
domain: Hypoxia-inducible factor HIF ihhibitor (FIH1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.7e-29  Score=215.84  Aligned_cols=190  Identities=21%  Similarity=0.304  Sum_probs=132.4

Q ss_pred             ccCCCCCcceeecCCCCHHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCCCCEEEEeccCCCCCcccc
Q 026937           14 LSLGSNSTIERLESPPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVT   93 (230)
Q Consensus        14 ~~~~~~~~I~ri~~~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~~~~~g~~d~~~~   93 (230)
                      ++++ ..+|+|++. .++  +.++|+..++||||+|++.  +|||+ +||. +||++++|+. .|+|+.+.++.......
T Consensus        21 ~~~~-~~~vpr~~~-~~~--~~e~y~~~~~PvVi~g~~~--~Wpa~-kWt~-dyL~~~~Gd~-~V~v~~~~~~~~~~~~~   91 (335)
T d1h2ka_          21 YSFP-TRPIPRLSQ-SDP--RAEELIENEEPVVLTDTNL--VYPAL-KWDL-EYLQENIGNG-DFSVYSASTHKFLYYDE   91 (335)
T ss_dssp             CSSC-EEECCEECT-TCH--HHHHHHHTTCCEEESCCCT--TGGGG-GCCH-HHHHHHSCSC-CEEEEEESSSBCCCCCG
T ss_pred             CCCC-CcccCccCC-CCc--CHHHHhcCCCCEEEeCCCC--CCCcc-cCCH-HHHHHhhCCc-eEEEEEecCcccccccc
Confidence            3344 568899996 555  4578999999999999999  99997 7998 9999999999 99999876543321110


Q ss_pred             cCCCCCCcccccc-ccceEEEecHHHHHHHHHcCC--CCccccccccccccccccchhhhcccccc-hhhhhhhh---C-
Q 026937           94 LTHPRSGEISQCF-ASAHVERLPFDEALQLVSNSK--NGDVVAYLQQQNDCFRDEYSVLGSDCDEH-IAWATEAL---G-  165 (230)
Q Consensus        94 ~~~~~~~~~~~~f-~~~~~~~m~~~efl~~~~~~~--~~~~~~Yl~~~~~~l~~~~~~L~~Di~~~-~p~~~~~~---~-  165 (230)
                      ..   .. ....| .......|++++|++.+....  .....+|+.+..  .....+.+..|+..+ ..|.....   . 
T Consensus        92 ~~---~~-~~~~~~~~~~~~~~~~~ef~~~~~~~~~~~~~~~~yl~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  165 (335)
T d1h2ka_          92 KK---MA-NFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTL--NDTVGRKIVMDFLGFNWNWINKQQGKRGW  165 (335)
T ss_dssp             GG---GG-GGTTCCCSEEEEEECHHHHHHHHHHHHHTTCCCEEEEEEEC--CTTSCHHHHHHHHTSCHHHHHHHHHHHTC
T ss_pred             cc---cc-cccccccccchhcccHHHHHHHHHhccccCCCcceEhhhcc--ccccChhhhcccccCcccccchhhccccc
Confidence            00   00 00111 233577999999999986532  223567887542  222234455555421 12222111   1 


Q ss_pred             CCCCccEEEeeCCCCCCCccccCCCceEEEEEeEeEEEEeCCCCCCCCcceec
Q 026937          166 CYPEAVNLWIGNQLSETSFHKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYV  218 (230)
Q Consensus       166 ~~~~~~~lwiG~~gt~T~lH~D~~~N~~~qi~G~Kr~~LfpP~~~~~LY~~~~  218 (230)
                      ......+||||++|+.|++|+|.++|++|||.|+|+|+||||.+..+||+...
T Consensus       166 ~~~~~~~lwiG~~gs~t~~H~D~~~~~~~q~~G~K~~~l~~p~~~~~~~~~~~  218 (335)
T d1h2ka_         166 GQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPV  218 (335)
T ss_dssp             CCEEECEEEEECTTCEEEEECCSEEEEEEEEESCEEEEEECGGGHHHHCBCCT
T ss_pred             cCCcceEEEEcCCCCCCccccccccceEEEeccceEEEEeccccccccccccc
Confidence            12235789999999999999999999999999999999999999999987654

>d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Asparaginyl hydroxylase-like
domain: Putative asparaginyl hydroxylase YxbC
species: Bacillus subtilis [TaxId: 1423]

Probab=99.82  E-value=2.5e-20  Score=158.87  Aligned_cols=161  Identities=15%  Similarity=0.135  Sum_probs=102.1

Q ss_pred             CCCHHHHHHHhhcCCCcEEEEcCCCCCCCCccccCCChhhHHHHcCCCCCEEEEeccCCCCCcccccCCCCCCccccccc
Q 026937           28 PPTPLQFLRDYVSQNKPCIIKNVSLHHQWPAFSLWPHPSYLSKTLSSSPPVSVHLSPNGRADSLVTLTHPRSGEISQCFA  107 (230)
Q Consensus        28 ~~s~~~F~~~y~~~~~PvVi~g~~~~~~Wpa~~~Wt~~eyL~~~~G~~~~V~v~~~~~g~~d~~~~~~~~~~~~~~~~f~  107 (230)
                      ++|+++|+++|.. ++||||+|++.  +|+|+.+|+...++....+....+.+.... +.... ..             .
T Consensus         8 pis~eeF~~~y~~-kkPvvir~~~~--~~~a~~~w~~~~~l~~~~~~~~~~~~~~~~-~~~~~-~~-------------~   69 (319)
T d1vrba1           8 PVTMSEFLEEYWP-VKPLVARGEVE--RFTSIPGFEKVRTLENVLAIYNNPVMVVGD-AVIEE-SE-------------G   69 (319)
T ss_dssp             TSCHHHHHHHTTT-TSCEEECCCGG--GGGGSTTCGGGSSHHHHHHHCCSCEEEC-------------------------
T ss_pred             CCCHHHHHHHcCC-CCCEEEcCCcc--cCccccCCccHHHHHHccCccccceEEccC-Cceec-cC-------------C
Confidence            6999999999984 68999999999  999999998645555443321011121111 00000 00             0


Q ss_pred             cceEEEecHHHHHHHHHcCCCCccccccccccccccccchhhhcccccchhhhhhhhCC---CCCccEEEeeCCCCCCCc
Q 026937          108 SAHVERLPFDEALQLVSNSKNGDVVAYLQQQNDCFRDEYSVLGSDCDEHIAWATEALGC---YPEAVNLWIGNQLSETSF  184 (230)
Q Consensus       108 ~~~~~~m~~~efl~~~~~~~~~~~~~Yl~~~~~~l~~~~~~L~~Di~~~~p~~~~~~~~---~~~~~~lwiG~~gt~T~l  184 (230)
                      ......+...++.+.+..+.    .+.+...+ ........|.+++..       .++.   .....++|+|++|+.+++
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~l~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~  137 (319)
T d1vrba1          70 ITDRFLVSPAEALEWYEKGA----ALEFDFTD-LFIPQVRRWIEKLKA-------ELRLPAGTSSKAIVYAAKNGGGFKA  137 (319)
T ss_dssp             ---CEEECHHHHHHHHHTTC----CEEECCGG-GTCTHHHHHHHHHHH-------HTTCCTTCCEEEEEEEECSSCCCCS
T ss_pred             cccccccchHHHHHHHhcCC----EEEEechh-hcChHHHHHHhhhHH-------hhcCcccccceeEEEecCCCCCCcc
Confidence            11233566777777776541    22222211 122223334444421       2221   123567999999999999


Q ss_pred             cccCCCceEEEEEeEeEEEEeCCCCCCCCcceec
Q 026937          185 HKDHYENLYTVVSGQKHFLLLPPTDVHRCGTVYV  218 (230)
Q Consensus       185 H~D~~~N~~~qi~G~Kr~~LfpP~~~~~LY~~~~  218 (230)
                      |+|.++||+|||.|+|+|+||||.+...+|+...
T Consensus       138 H~D~~d~f~~Qv~G~K~W~L~~p~~~~~~~~~~~  171 (319)
T d1vrba1         138 HFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYD  171 (319)
T ss_dssp             EECSSEEEEEEEESCEEEEEECCSSCSSCSSCEE
T ss_pred             ccCCCceeEEeecceEEEEEeCCccccccccCcc
Confidence            9999999999999999999999999999998654