Citrus Sinensis ID: 026972

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Protein Sequence
MTLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHTP
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHcccccccccccccccccEEEEEEEEEcccccHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHccccEEEEEcccccEEcHHHHHHHHHcccccccEEEEEEEcccccccccccEEEccccccccccccccccccccEEEEcHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEEcccccHHHHHHHHHHcccccHHHHHHHccccEEEEEEEEccccccHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccEEcHHHHHHHHHHHcccccEEEEEEccccEEEcccccEcccHHHHHccccccccccccccEEEEcHHHHHHHHHccc
Coil and Loop (DISEMBL)
MTLDKTISSLEMQLAAARAAkgdteeaspivtklGTENLKARRKVFFVMGIITAFSsrkrrdsiretwmpkgdgllklenekGIIMRFVIGhsataggvldraidaedeqHKDFLRLNHIEGYHELSSKTQIYFSTAVAKwdadfyikvdddvhvNLGMVGstlarhrskprvyigcmksgpvlgqkgvkyhepeywkfgeegnkyfrHATGQIYAISKDLATYISAHTP
Flexible Loop (DISEMBL)
MTLDKTISSLEMQLAAARaakgdteeaspivtklgtenlkarrKVFFVMGIitafssrkrrdsiretwmpkgdgllkleNEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVgstlarhrskprvyigcmksgpvlgqkgvKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHTP
Low Complexity Region (SEG)
MTLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHTP
Disordered region (IsUnstruct)
******************************VTKLGTENLKARRKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYI*****
Disordered Region (DISOPRED)
**LDKTISSLEMQ********************************FFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHT*
Disordered Region (DISEMBL)
MTLDKTISSLEMQL*************SPIVTKLGTENLKARRKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHTP
Disordered Region (DISPRO)
*TLDKTISSLEMQLAAARAA*********************RRKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHT*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHTP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	230	2.2.26 [Sep-21-2011]
Q9MAP8	399	Probable beta-1,3-galacto	yes	no	0.986	0.568	0.819	1e-108
A8MRC7	407	Probable beta-1,3-galacto	no	no	0.978	0.552	0.702	2e-94
Q6NQB7	393	Beta-1,3-galactosyltransf	no	no	0.934	0.547	0.685	4e-92
Q9ZV71	409	Probable beta-1,3-galacto	no	no	0.978	0.550	0.706	2e-90
Q9C809	395	Probable beta-1,3-galacto	no	no	0.969	0.564	0.696	1e-89
Q8LEJ9	407	Probable beta-1,3-galacto	no	no	0.978	0.552	0.684	3e-87
Q9SAA4	384	Probable beta-1,3-galacto	no	no	0.943	0.565	0.663	9e-85
Q9LM60	398	Probable beta-1,3-galacto	no	no	0.978	0.565	0.637	2e-82
Q94F27	338	Probable beta-1,3-galacto	no	no	0.934	0.636	0.434	5e-50
Q94A05	345	Probable beta-1,3-galacto	no	no	0.939	0.626	0.434	2e-47

>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1

 Score =  392 bits (1007), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/227 (81%), Positives = 203/227 (89%)

Query: 2   TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
           TLDKTISSLE++LA ARAA+ D  + SP V K   +  K R ++FFVMGI+TAFSSRKRR
Sbjct: 87  TLDKTISSLEVELATARAARSDGRDGSPAVAKTVADQSKIRPRMFFVMGIMTAFSSRKRR 146

Query: 62  DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
           DSIR TW+PKGD L +LE EKGIIMRFVIGHS++ GGVLD  I+AE+EQHKDF RLNHIE
Sbjct: 147 DSIRGTWLPKGDELKRLETEKGIIMRFVIGHSSSPGGVLDHTIEAEEEQHKDFFRLNHIE 206

Query: 122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
           GYHELSSKTQIYFS+AVAKWDADFYIKVDDDVHVNLGM+GSTLARHRSKPRVYIGCMKSG
Sbjct: 207 GYHELSSKTQIYFSSAVAKWDADFYIKVDDDVHVNLGMLGSTLARHRSKPRVYIGCMKSG 266

Query: 182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAH 228
           PVL QKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS +
Sbjct: 267 PVLAQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVN 313

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1

 Score =  345 bits (884), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 158/225 (70%), Positives = 188/225 (83%)

Query: 2   TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
           TLDKTISSLEM+LAAAR+ +   +  +P+   +G +  + +R+   V+GI TAFSSRKRR
Sbjct: 95  TLDKTISSLEMELAAARSVQESLQNGAPLSDDMGKKQPQEQRRFLMVVGINTAFSSRKRR 154

Query: 62  DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
           DSIR TWMP+G+   +LE EKGII+RFVIGHSAT GG+LDRAI+AED +H DFLRL+H+E
Sbjct: 155 DSIRATWMPQGEKRKRLEEEKGIIIRFVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVE 214

Query: 122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
           GY ELS KT+ YFSTA + WDADFY+KVDDDVHVN+  +G TL RHR KPRVYIGCMKSG
Sbjct: 215 GYLELSGKTKTYFSTAFSMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSG 274

Query: 182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS 226
           PVL QKGV+YHEPEYWKFGE GNKYFRHATGQ+YAIS+DLA+YIS
Sbjct: 275 PVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYIS 319

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1

 Score =  337 bits (864), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 161/235 (68%), Positives = 189/235 (80%), Gaps = 20/235 (8%)

Query: 2   TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
           +LDK++S+L    ++     G   E +P            R+KVF VMGI TAFSSRKRR
Sbjct: 89  SLDKSVSTLSSTRSSQEMVDG--SETNP------------RKKVFMVMGINTAFSSRKRR 134

Query: 62  DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
           DS+RETWMP+G+ L +LE EKGI+++F+IGHSAT+  +LDRAID+ED QHKDFLRL H+E
Sbjct: 135 DSVRETWMPQGEKLERLEQEKGIVIKFMIGHSATSNSILDRAIDSEDAQHKDFLRLEHVE 194

Query: 122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
           GYHELS+KT+I+FSTAVAKWDA+FYIKVDDDVHVNLGM+ STLARHRSKPRVYIGCMKSG
Sbjct: 195 GYHELSAKTKIFFSTAVAKWDAEFYIKVDDDVHVNLGMLASTLARHRSKPRVYIGCMKSG 254

Query: 182 PVLGQ------KGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHTP 230
           PVL Q      + VKYHEPEYWKFGE+GNKYFRHATGQIYAISKDLA YIS + P
Sbjct: 255 PVLAQNLLNCFRTVKYHEPEYWKFGEDGNKYFRHATGQIYAISKDLANYISINQP 309

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1

 Score =  332 bits (850), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 159/225 (70%), Positives = 189/225 (84%)

Query: 2   TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
           TLDKTISSLEM+LAAAR+A+      +PI   +  + L  +R+   V+GI TAFSSRKRR
Sbjct: 97  TLDKTISSLEMELAAARSAQESLVNGAPISNDMEKKQLPGKRRYLMVVGINTAFSSRKRR 156

Query: 62  DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
           DS+R TWMP G+   KLE EKGII+RFVIGHSATAGG+LDR+I+AED++H DFLRL+H+E
Sbjct: 157 DSVRTTWMPSGEKRKKLEEEKGIIIRFVIGHSATAGGILDRSIEAEDKKHGDFLRLDHVE 216

Query: 122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
           GY ELS KT+ YFSTAV+KWDA+FY+KVDDDVHVN+  +G TL RHR K RVY+GCMKSG
Sbjct: 217 GYLELSGKTKTYFSTAVSKWDAEFYVKVDDDVHVNIATLGETLVRHRKKHRVYLGCMKSG 276

Query: 182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS 226
           PVL QKGV+YHEPEYWKFGE GNKYFRHATGQ+YAIS+DLA+YIS
Sbjct: 277 PVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYIS 321

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C809|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1

 Score =  328 bits (842), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 158/227 (69%), Positives = 196/227 (86%), Gaps = 4/227 (1%)

Query: 2   TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
           +L++T+S+LEM+LAAAR     ++ +S   ++   +N    +KVF V+GI TAFSS+KRR
Sbjct: 85  SLERTMSTLEMELAAART----SDRSSEFWSERSAKNQSRLQKVFAVIGINTAFSSKKRR 140

Query: 62  DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
           DS+R+TWMP G+ L K+E EKGI++RFVIGHSAT GGVLD+AID ED +HKDFLRL HIE
Sbjct: 141 DSVRQTWMPTGEKLKKIEKEKGIVVRFVIGHSATPGGVLDKAIDEEDSEHKDFLRLKHIE 200

Query: 122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
           GYH+LS+KT++YFSTA A +DA+FY+KVDDDVHVNLGM+ +TLAR++S+PR+YIGCMKSG
Sbjct: 201 GYHQLSTKTRLYFSTATAMYDAEFYVKVDDDVHVNLGMLVTTLARYQSRPRIYIGCMKSG 260

Query: 182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAH 228
           PVL QKGVKYHEPE+WKFGEEGNKYFRHATGQIYAISKDLATYIS +
Sbjct: 261 PVLSQKGVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISTN 307

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1

 Score =  321 bits (822), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 154/225 (68%), Positives = 182/225 (80%)

Query: 2   TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
           TLDKTIS LE +LA ARAA+      SP+           +RK   V+G+ TAFSSRKRR
Sbjct: 96  TLDKTISKLETELADARAAQESIMNGSPVSDDFKLPETVTKRKYLMVVGVNTAFSSRKRR 155

Query: 62  DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
           DS+R TWMP G+   KLE EKGI+MRFVIGHS+T GG+LDRAI AE+ +H DFLRL+H+E
Sbjct: 156 DSVRATWMPPGEERKKLEEEKGIVMRFVIGHSSTPGGILDRAIQAEESKHGDFLRLDHVE 215

Query: 122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
           GY ELS+KT+ YF+TA A WDADFY+KVDDDVHVN+  +G+ LAR+R KPRVYIGCMKSG
Sbjct: 216 GYLELSAKTKTYFTTAFAMWDADFYVKVDDDVHVNIATLGAELARYRMKPRVYIGCMKSG 275

Query: 182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS 226
           PVL QKGV+YHEPEYWKFGEEGNKYFRHATGQ+YAIS++LA+YIS
Sbjct: 276 PVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISRELASYIS 320

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2

 Score =  313 bits (801), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 148/223 (66%), Positives = 177/223 (79%), Gaps = 6/223 (2%)

Query: 3   LDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRRD 62
           LDK+IS+LEM+L AARA      E   +  K    N   +RK F V+GI TAFSSRKRRD
Sbjct: 79  LDKSISNLEMKLVAARA------ERESLSGKFNISNEAKKRKYFMVIGINTAFSSRKRRD 132

Query: 63  SIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEG 122
           S+R TWMP+G+ L KLE EKGII+RFVIGHS  + G+LD+AI+AE++ H DFLRL H EG
Sbjct: 133 SVRSTWMPQGENLKKLEEEKGIIVRFVIGHSVLSHGILDKAIEAEEKTHGDFLRLEHTEG 192

Query: 123 YHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGP 182
           Y +LS+KT+ +F+TAV+ WDA+FYIKVDDDVHVNL  +   L+ H++KPRVY+GCMKSGP
Sbjct: 193 YMKLSAKTKTFFATAVSLWDAEFYIKVDDDVHVNLASLKKALSAHQNKPRVYVGCMKSGP 252

Query: 183 VLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYI 225
           VL +K VKYHEPEYWKFGE GNKYFRHATGQ YAISKDLATYI
Sbjct: 253 VLARKSVKYHEPEYWKFGEVGNKYFRHATGQFYAISKDLATYI 295

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1

 Score =  305 bits (780), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 146/229 (63%), Positives = 185/229 (80%), Gaps = 4/229 (1%)

Query: 2   TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
           +LDK++S L+ QL+A  + +     ++   +  G +    + KVF V+GI TAFSSRKRR
Sbjct: 87  SLDKSVSMLQKQLSATHSPQQIVNVSATNSSTEGNQ----KNKVFMVIGINTAFSSRKRR 142

Query: 62  DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
           DS+RETWMP+G+ L KLE EKGI+++F+IGHS+T   +LD+ ID+ED Q+ DF RL+H+E
Sbjct: 143 DSLRETWMPQGEKLEKLEKEKGIVVKFMIGHSSTPNSMLDKEIDSEDAQYNDFFRLDHVE 202

Query: 122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
           GY+ LS+KT+ +FS+AVAKWDA+FY+K+DDDVHVNLG + STLA HRSKPRVYIGCMKSG
Sbjct: 203 GYYNLSAKTKSFFSSAVAKWDAEFYVKIDDDVHVNLGTLASTLASHRSKPRVYIGCMKSG 262

Query: 182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHTP 230
           PVL +K  KY EPE+WKFGEEGNKYFRHATGQIYAISKDLATYIS + P
Sbjct: 263 PVLTKKTAKYREPEFWKFGEEGNKYFRHATGQIYAISKDLATYISNNQP 311

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q94F27|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1

 Score =  197 bits (501), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 97/223 (43%), Positives = 150/223 (67%), Gaps = 8/223 (3%)

Query: 5   KTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRRDSI 64
           KT+++LEM+L++AR  +G   ++  +    GTE    +++   V+GI+T+  ++K+RD++
Sbjct: 76  KTLAALEMELSSARQ-EGFVSKSPKLAD--GTET---KKRPLVVIGIMTSLGNKKKRDAV 129

Query: 65  RETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHI-EGY 123
           R+ WM  G  L KLE+EKG+I RFVIG SA  G  +D++ID E+ Q  DF+ L+ + E  
Sbjct: 130 RQAWMGTGASLKKLESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFIILDDVVEAP 189

Query: 124 HELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPV 183
            E S K +++F+ A  +WDA FY K  D+++VN+  +G+TLA H   PR YIGCMKSG V
Sbjct: 190 EEASKKVKLFFAYAADRWDAQFYAKAIDNIYVNIDALGTTLAAHLENPRAYIGCMKSGEV 249

Query: 184 LGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS 226
             +   K++EPE+WKFG++   YFRHA G++Y I+  LA ++S
Sbjct: 250 FSEPNHKWYEPEWWKFGDK-KAYFRHAYGEMYVITHALARFVS 291

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q94A05|B3GTA_ARATH Probable beta-1,3-galactosyltransferase 10 OS=Arabidopsis thaliana GN=B3GALT10 PE=2 SV=1

 Score =  188 bits (478), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 99/228 (43%), Positives = 147/228 (64%), Gaps = 12/228 (5%)

Query: 3   LDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRRD 62
           L++ I   EM+LA A++     ++ S  V+  G       +K+  V+G+ T F S  +R+
Sbjct: 85  LERRIVETEMELAQAKSQGYLKKQKS--VSSSG-------KKMLAVIGVYTGFGSHLKRN 135

Query: 63  SIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRL-NHIE 121
             R +WMP+ D L KLE E+G+++RFVIG SA  G  LDR ID E+   KDFL L NH E
Sbjct: 136 KFRGSWMPRDDALKKLE-ERGVVIRFVIGRSANRGDSLDRKIDEENRATKDFLILENHEE 194

Query: 122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
              EL  K + ++S AV  WDA+FY+KVDD+V ++L  + + L   RS+   YIGCMKSG
Sbjct: 195 AQEELPKKVKFFYSAAVQNWDAEFYVKVDDNVDLDLEGMIALLESRRSQDGAYIGCMKSG 254

Query: 182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHT 229
            V+ ++G +++EPE+WKFG++   YFRHATG +  +SK+LA Y++ ++
Sbjct: 255 DVITEEGSQWYEPEWWKFGDD-KSYFRHATGSLVILSKNLAQYVNINS 301

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	230
255555799	403	Beta-1,3-galactosyltransferase sqv-2, pu	0.991	0.565	0.881	1e-116
449456279	401	PREDICTED: probable beta-1,3-galactosylt	1.0	0.573	0.865	1e-114
225426532	405	PREDICTED: probable beta-1,3-galactosylt	0.991	0.562	0.877	1e-111
224061501	355	predicted protein [Populus trichocarpa]	0.947	0.614	0.846	1e-108
224115512	399	predicted protein [Populus trichocarpa]	0.991	0.571	0.868	1e-108
15223337	399	putative beta-1,3-galactosyltransferase	0.986	0.568	0.819	1e-107
297851732	399	galactosyltransferase family protein [Ar	0.986	0.568	0.819	1e-107
294464535	335	unknown [Picea sitchensis]	1.0	0.686	0.739	1e-100
168054515	398	predicted protein [Physcomitrella patens	0.995	0.575	0.733	8e-99
302814194	399	glycosyltransferase-like protein [Selagi	0.978	0.563	0.738	4e-97

>gi|255555799|ref|XP_002518935.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] gi|223541922|gb|EEF43468.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/228 (88%), Positives = 216/228 (94%)

Query: 1   MTLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKR 60
           MTLDKTISSLEMQLAAARA KGD+EE SP+ TK GT+ LK R+KVFFVMGIITAFSSRKR
Sbjct: 90  MTLDKTISSLEMQLAAARAVKGDSEEGSPMGTKSGTDPLKERQKVFFVMGIITAFSSRKR 149

Query: 61  RDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHI 120
           RDSIRETW+PKG+ L KLE EKGII+RFVIGHSA+ GGVLDRAIDAE+EQHKDFLRLNHI
Sbjct: 150 RDSIRETWLPKGEELKKLETEKGIIIRFVIGHSASPGGVLDRAIDAEEEQHKDFLRLNHI 209

Query: 121 EGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKS 180
           EGYHELSSKTQIYFSTAV++WDADFYIKVDDDVH+NLGM+GSTLARHRSKPRVYIGCMKS
Sbjct: 210 EGYHELSSKTQIYFSTAVSRWDADFYIKVDDDVHINLGMIGSTLARHRSKPRVYIGCMKS 269

Query: 181 GPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAH 228
           GPVL QKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISK+LATYIS +
Sbjct: 270 GPVLSQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKNLATYISVN 317

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456279|ref|XP_004145877.1| PREDICTED: probable beta-1,3-galactosyltransferase 6-like [Cucumis sativus]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/230 (86%), Positives = 214/230 (93%)

Query: 1   MTLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKR 60
           MTLDKTISSLE+QLAAARA+K D +E SP+VT+ G + LK R KVFFVMGIITAFSSRKR
Sbjct: 88  MTLDKTISSLEVQLAAARASKADNDEGSPMVTEPGAKILKERPKVFFVMGIITAFSSRKR 147

Query: 61  RDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHI 120
           RDSIRETWMP+G+ L KLE EKGII+RFVIGHSAT GGVLDRA+DAE+ QHKDFL+LNHI
Sbjct: 148 RDSIRETWMPQGEELRKLEVEKGIIIRFVIGHSATPGGVLDRAVDAEEVQHKDFLKLNHI 207

Query: 121 EGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKS 180
           EGYHELSSKTQIYFSTAVAKWDADF+IKVDDDVH+NLGMVGSTLARHRSKPRVYIGCMKS
Sbjct: 208 EGYHELSSKTQIYFSTAVAKWDADFFIKVDDDVHINLGMVGSTLARHRSKPRVYIGCMKS 267

Query: 181 GPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHTP 230
           GPVL QKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS + P
Sbjct: 268 GPVLAQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVNRP 317

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426532|ref|XP_002278708.1| PREDICTED: probable beta-1,3-galactosyltransferase 6 [Vitis vinifera] gi|297742464|emb|CBI34613.3| unnamed protein product [Vitis vinifera]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/228 (87%), Positives = 212/228 (92%)

Query: 1   MTLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKR 60
           MTLDKTISSLEMQLAAARA+KGD EE SP+VTK GTE +K R+KVFFVMGI+TAFSSRKR
Sbjct: 92  MTLDKTISSLEMQLAAARASKGDGEEGSPMVTKPGTEQVKERQKVFFVMGIMTAFSSRKR 151

Query: 61  RDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHI 120
           RDSIRETWMP+G  L KLE EKGII+RFVIGHSAT GGVLDR IDAE+ QHKDFLRLNHI
Sbjct: 152 RDSIRETWMPQGKELKKLEKEKGIIIRFVIGHSATPGGVLDRTIDAEETQHKDFLRLNHI 211

Query: 121 EGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKS 180
           EGYHELSSKTQIYFSTAVA+WDADFYIKVDDDVH+NLGMVGSTLARHRSKPRVY GCMKS
Sbjct: 212 EGYHELSSKTQIYFSTAVARWDADFYIKVDDDVHINLGMVGSTLARHRSKPRVYTGCMKS 271

Query: 181 GPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAH 228
           GPVL + GVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS +
Sbjct: 272 GPVLSETGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVN 319

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061501|ref|XP_002300511.1| predicted protein [Populus trichocarpa] gi|222847769|gb|EEE85316.1| predicted protein [Populus trichocarpa]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 193/228 (84%), Positives = 205/228 (89%), Gaps = 10/228 (4%)

Query: 1   MTLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKR 60
           MTLDKTISSLEMQLA+ARAAK   E+ SP+           R KVFFVMGIITAFSSRKR
Sbjct: 52  MTLDKTISSLEMQLASARAAKVINEDGSPM----------ERPKVFFVMGIITAFSSRKR 101

Query: 61  RDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHI 120
           RDSIRETWMPKG+ L KLE EKGII+RFVIGHSA+ GGVLDRAI+AED+QHKDFLRLNH+
Sbjct: 102 RDSIRETWMPKGEELKKLETEKGIIIRFVIGHSASPGGVLDRAIEAEDDQHKDFLRLNHV 161

Query: 121 EGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKS 180
           EGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVH+NLGMVGSTLARHRSKPRVY+GCMKS
Sbjct: 162 EGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHINLGMVGSTLARHRSKPRVYMGCMKS 221

Query: 181 GPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAH 228
           GPVL Q GVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS +
Sbjct: 222 GPVLAQTGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVN 269

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115512|ref|XP_002317052.1| predicted protein [Populus trichocarpa] gi|222860117|gb|EEE97664.1| predicted protein [Populus trichocarpa]

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/228 (86%), Positives = 212/228 (92%)

Query: 1   MTLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKR 60
           M LDKTISS+E+QLA+ARAAKGD E  SP+V K G E+LK R KVFFVMGIITAFSSR+R
Sbjct: 86  MALDKTISSMEVQLASARAAKGDNENVSPMVIKSGNEHLKERPKVFFVMGIITAFSSRRR 145

Query: 61  RDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHI 120
           RDSIRETWMPKG+ L KLE EKGII+RFVIGHSA+ GGVLDRAI+AEDEQ+KDFLRLNH+
Sbjct: 146 RDSIRETWMPKGEELKKLETEKGIIIRFVIGHSASPGGVLDRAIEAEDEQYKDFLRLNHV 205

Query: 121 EGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKS 180
           EGYHELSSKTQIYFSTAVA WDADFYIKVDDDVH+NLGMVGSTLARHRSKPRVYIGCMKS
Sbjct: 206 EGYHELSSKTQIYFSTAVAMWDADFYIKVDDDVHINLGMVGSTLARHRSKPRVYIGCMKS 265

Query: 181 GPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAH 228
           GPVL QKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS +
Sbjct: 266 GPVLAQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVN 313

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15223337|ref|NP_174569.1| putative beta-1,3-galactosyltransferase 6 [Arabidopsis thaliana] gi|75192409|sp|Q9MAP8.1|B3GT6_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 6 gi|6910570|gb|AAF31275.1|AC006424_4 Highly similar to avr9 [Arabidopsis thaliana] gi|30102650|gb|AAP21243.1| At1g32930 [Arabidopsis thaliana] gi|110735748|dbj|BAE99853.1| hypothetical protein [Arabidopsis thaliana] gi|332193420|gb|AEE31541.1| putative beta-1,3-galactosyltransferase 6 [Arabidopsis thaliana]

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/227 (81%), Positives = 203/227 (89%)

Query: 2   TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
           TLDKTISSLE++LA ARAA+ D  + SP V K   +  K R ++FFVMGI+TAFSSRKRR
Sbjct: 87  TLDKTISSLEVELATARAARSDGRDGSPAVAKTVADQSKIRPRMFFVMGIMTAFSSRKRR 146

Query: 62  DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
           DSIR TW+PKGD L +LE EKGIIMRFVIGHS++ GGVLD  I+AE+EQHKDF RLNHIE
Sbjct: 147 DSIRGTWLPKGDELKRLETEKGIIMRFVIGHSSSPGGVLDHTIEAEEEQHKDFFRLNHIE 206

Query: 122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
           GYHELSSKTQIYFS+AVAKWDADFYIKVDDDVHVNLGM+GSTLARHRSKPRVYIGCMKSG
Sbjct: 207 GYHELSSKTQIYFSSAVAKWDADFYIKVDDDVHVNLGMLGSTLARHRSKPRVYIGCMKSG 266

Query: 182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAH 228
           PVL QKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS +
Sbjct: 267 PVLAQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVN 313

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851732|ref|XP_002893747.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297339589|gb|EFH70006.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/227 (81%), Positives = 204/227 (89%)

Query: 2   TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
           TLDKTISSLE++LA+ARAA+ D  + SP V K   +  K R ++FFVMGI+TAFSSRKRR
Sbjct: 87  TLDKTISSLEVELASARAARSDGRDGSPAVAKSVADQSKIRPRMFFVMGIMTAFSSRKRR 146

Query: 62  DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
           DSIR TW+PKGD L +LE EKGIIMRFVIGHS++ GGVLD  I+AE+EQHKDF RLNHIE
Sbjct: 147 DSIRGTWLPKGDELKRLETEKGIIMRFVIGHSSSPGGVLDHTIEAEEEQHKDFFRLNHIE 206

Query: 122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
           GYHELSSKTQIYFS+AVAKWDADFYIKVDDDVHVNLGM+GSTLARHRSKPRVYIGCMKSG
Sbjct: 207 GYHELSSKTQIYFSSAVAKWDADFYIKVDDDVHVNLGMLGSTLARHRSKPRVYIGCMKSG 266

Query: 182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAH 228
           PVL QKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS +
Sbjct: 267 PVLAQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVN 313

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|294464535|gb|ADE77778.1| unknown [Picea sitchensis]

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/230 (73%), Positives = 198/230 (86%)

Query: 1   MTLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKR 60
           ++LDKTISSLEM+LA AR AK      SP++ K      + R+K F V+GI TAFSSRKR
Sbjct: 22  LSLDKTISSLEMELAVARTAKSANLNGSPVLEKPDGRGSEVRQKAFVVIGINTAFSSRKR 81

Query: 61  RDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHI 120
           RDS+RETWMP+G  L +LE +KGI++RFVIGHS T GG+LDRAIDAED QH DFLRL H+
Sbjct: 82  RDSVRETWMPQGPKLKQLEEKKGIVIRFVIGHSVTPGGILDRAIDAEDAQHNDFLRLEHV 141

Query: 121 EGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKS 180
           EGYHELS+KT+ YFSTAVAKWDADFY+KVDDDVHVNLGM+ +TL+R+RSKPR+YIGCMKS
Sbjct: 142 EGYHELSAKTKTYFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRYRSKPRIYIGCMKS 201

Query: 181 GPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHTP 230
           GPVL QKGVKYHEPEYWKFGEEGN+YFRHATGQIYAIS+DLATYIS ++P
Sbjct: 202 GPVLAQKGVKYHEPEYWKFGEEGNRYFRHATGQIYAISRDLATYISINSP 251

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168054515|ref|XP_001779676.1| predicted protein [Physcomitrella patens subsp. patens] gi|162668874|gb|EDQ55472.1| predicted protein [Physcomitrella patens subsp. patens]

 Score =  365 bits (937), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 171/233 (73%), Positives = 196/233 (84%), Gaps = 4/233 (1%)

Query: 2   TLDKTISSLEMQLAAARAAKGDT----EEASPIVTKLGTENLKARRKVFFVMGIITAFSS 57
           TLDKT++SLE +LA+AR  K          S  + +   E ++ R+K F V+GI TAFSS
Sbjct: 81  TLDKTVASLETELASAREQKATATIVKHSQSESIRQSAGERIEGRKKAFVVIGINTAFSS 140

Query: 58  RKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRL 117
           RKRRDS+RETWMP+GD L +LE EKGI+MRFVIGHSAT GG+LDRAI+AED QH DFLRL
Sbjct: 141 RKRRDSVRETWMPQGDDLRRLEVEKGIVMRFVIGHSATPGGILDRAIEAEDSQHNDFLRL 200

Query: 118 NHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGC 177
           +H+EGYHELS KT+IYFSTAV KWDADFY+KVDDDVHVN+GM+ +TLARHR+KPRVYIGC
Sbjct: 201 DHVEGYHELSMKTKIYFSTAVRKWDADFYVKVDDDVHVNVGMLATTLARHRTKPRVYIGC 260

Query: 178 MKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHTP 230
           MKSGPVL QKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYI  + P
Sbjct: 261 MKSGPVLAQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIDVNRP 313

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302814194|ref|XP_002988781.1| glycosyltransferase-like protein [Selaginella moellendorffii] gi|300143352|gb|EFJ10043.1| glycosyltransferase-like protein [Selaginella moellendorffii]

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 172/233 (73%), Positives = 196/233 (84%), Gaps = 8/233 (3%)

Query: 2   TLDKTISSLEMQLAAARAAKGDT----EEASPIVTKLGTENLKARRKVFFVMGIITAFSS 57
            LDKTISSLEM+LAA RAA+  T        P + K G    +AR+KVF V+GI TAFSS
Sbjct: 87  NLDKTISSLEMELAAVRAAQASTIGGGAAEKPAMEKTG----EARQKVFVVIGINTAFSS 142

Query: 58  RKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRL 117
           RKRRDSIRETWMP G+   +LE EKGII++FVIGHSAT GG+LD AI+AED QH DFLRL
Sbjct: 143 RKRRDSIRETWMPTGEKRKQLEQEKGIIIKFVIGHSATPGGILDNAIEAEDAQHGDFLRL 202

Query: 118 NHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGC 177
           +H+EGYHELSSKT+ YFSTAVAKWDAD+Y+KVDDDVH+NLGM+  TLARHRSKPR YIGC
Sbjct: 203 DHVEGYHELSSKTKTYFSTAVAKWDADYYVKVDDDVHINLGMLTVTLARHRSKPRAYIGC 262

Query: 178 MKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHTP 230
           MKSGPVL QKGVKYHEPEYWKFGE+GN+YFRHATGQ+YAIS+DLATYIS + P
Sbjct: 263 MKSGPVLAQKGVKYHEPEYWKFGEDGNRYFRHATGQVYAISRDLATYISINQP 315

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	230
TAIR|locus:2038031	399	AT1G32930 [Arabidopsis thalian	0.986	0.568	0.819	3.1e-99
TAIR|locus:2062545	409	AT2G32430 [Arabidopsis thalian	0.978	0.550	0.706	4.3e-86
TAIR|locus:2207225	407	AT1G05170 [Arabidopsis thalian	0.978	0.552	0.702	5.4e-86
TAIR|locus:2116452	407	AT4G26940 [Arabidopsis thalian	0.978	0.552	0.684	1e-82
TAIR|locus:2029471	393	AT1G77810 [Arabidopsis thalian	0.847	0.496	0.767	2.2e-82
TAIR|locus:505006138	398	DD46 [Arabidopsis thaliana (ta	0.978	0.565	0.646	1.8e-78
TAIR|locus:2027352	384	AT1G11730 [Arabidopsis thalian	0.943	0.565	0.663	3.4e-77
TAIR|locus:2154247	338	AT5G53340 [Arabidopsis thalian	0.934	0.636	0.443	3.7e-48
TAIR|locus:2116627	345	AT4G32120 [Arabidopsis thalian	0.934	0.623	0.441	1.6e-45
TAIR|locus:2059531	346	AT2G25300 [Arabidopsis thalian	0.934	0.621	0.445	2.7e-45

TAIR|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)]

 Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
 Identities = 186/227 (81%), Positives = 203/227 (89%)

Query:     2 TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
             TLDKTISSLE++LA ARAA+ D  + SP V K   +  K R ++FFVMGI+TAFSSRKRR
Sbjct:    87 TLDKTISSLEVELATARAARSDGRDGSPAVAKTVADQSKIRPRMFFVMGIMTAFSSRKRR 146

Query:    62 DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
             DSIR TW+PKGD L +LE EKGIIMRFVIGHS++ GGVLD  I+AE+EQHKDF RLNHIE
Sbjct:   147 DSIRGTWLPKGDELKRLETEKGIIMRFVIGHSSSPGGVLDHTIEAEEEQHKDFFRLNHIE 206

Query:   122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
             GYHELSSKTQIYFS+AVAKWDADFYIKVDDDVHVNLGM+GSTLARHRSKPRVYIGCMKSG
Sbjct:   207 GYHELSSKTQIYFSSAVAKWDADFYIKVDDDVHVNLGMLGSTLARHRSKPRVYIGCMKSG 266

Query:   182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAH 228
             PVL QKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS +
Sbjct:   267 PVLAQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVN 313

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)]

 Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
 Identities = 159/225 (70%), Positives = 189/225 (84%)

Query:     2 TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
             TLDKTISSLEM+LAAAR+A+      +PI   +  + L  +R+   V+GI TAFSSRKRR
Sbjct:    97 TLDKTISSLEMELAAARSAQESLVNGAPISNDMEKKQLPGKRRYLMVVGINTAFSSRKRR 156

Query:    62 DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
             DS+R TWMP G+   KLE EKGII+RFVIGHSATAGG+LDR+I+AED++H DFLRL+H+E
Sbjct:   157 DSVRTTWMPSGEKRKKLEEEKGIIIRFVIGHSATAGGILDRSIEAEDKKHGDFLRLDHVE 216

Query:   122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
             GY ELS KT+ YFSTAV+KWDA+FY+KVDDDVHVN+  +G TL RHR K RVY+GCMKSG
Sbjct:   217 GYLELSGKTKTYFSTAVSKWDAEFYVKVDDDVHVNIATLGETLVRHRKKHRVYLGCMKSG 276

Query:   182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS 226
             PVL QKGV+YHEPEYWKFGE GNKYFRHATGQ+YAIS+DLA+YIS
Sbjct:   277 PVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYIS 321

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)]

 Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
 Identities = 158/225 (70%), Positives = 188/225 (83%)

Query:     2 TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
             TLDKTISSLEM+LAAAR+ +   +  +P+   +G +  + +R+   V+GI TAFSSRKRR
Sbjct:    95 TLDKTISSLEMELAAARSVQESLQNGAPLSDDMGKKQPQEQRRFLMVVGINTAFSSRKRR 154

Query:    62 DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
             DSIR TWMP+G+   +LE EKGII+RFVIGHSAT GG+LDRAI+AED +H DFLRL+H+E
Sbjct:   155 DSIRATWMPQGEKRKRLEEEKGIIIRFVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVE 214

Query:   122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
             GY ELS KT+ YFSTA + WDADFY+KVDDDVHVN+  +G TL RHR KPRVYIGCMKSG
Sbjct:   215 GYLELSGKTKTYFSTAFSMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSG 274

Query:   182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS 226
             PVL QKGV+YHEPEYWKFGE GNKYFRHATGQ+YAIS+DLA+YIS
Sbjct:   275 PVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYIS 319

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)]

 Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
 Identities = 154/225 (68%), Positives = 182/225 (80%)

Query:     2 TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
             TLDKTIS LE +LA ARAA+      SP+           +RK   V+G+ TAFSSRKRR
Sbjct:    96 TLDKTISKLETELADARAAQESIMNGSPVSDDFKLPETVTKRKYLMVVGVNTAFSSRKRR 155

Query:    62 DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
             DS+R TWMP G+   KLE EKGI+MRFVIGHS+T GG+LDRAI AE+ +H DFLRL+H+E
Sbjct:   156 DSVRATWMPPGEERKKLEEEKGIVMRFVIGHSSTPGGILDRAIQAEESKHGDFLRLDHVE 215

Query:   122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
             GY ELS+KT+ YF+TA A WDADFY+KVDDDVHVN+  +G+ LAR+R KPRVYIGCMKSG
Sbjct:   216 GYLELSAKTKTYFTTAFAMWDADFYVKVDDDVHVNIATLGAELARYRMKPRVYIGCMKSG 275

Query:   182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS 226
             PVL QKGV+YHEPEYWKFGEEGNKYFRHATGQ+YAIS++LA+YIS
Sbjct:   276 PVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISRELASYIS 320

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)]

 Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
 Identities = 155/202 (76%), Positives = 177/202 (87%)

Query:    35 GTENLKARRKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSA 94
             G+E    R+KVF VMGI TAFSSRKRRDS+RETWMP+G+ L +LE EKGI+++F+IGHSA
Sbjct:   109 GSET-NPRKKVFMVMGINTAFSSRKRRDSVRETWMPQGEKLERLEQEKGIVIKFMIGHSA 167

Query:    95 TAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVH 154
             T+  +LDRAID+ED QHKDFLRL H+EGYHELS+KT+I+FSTAVAKWDA+FYIKVDDDVH
Sbjct:   168 TSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIKVDDDVH 227

Query:   155 VNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQ------KGVKYHEPEYWKFGEEGNKYFR 208
             VNLGM+ STLARHRSKPRVYIGCMKSGPVL Q      + VKYHEPEYWKFGE+GNKYFR
Sbjct:   228 VNLGMLASTLARHRSKPRVYIGCMKSGPVLAQNLLNCFRTVKYHEPEYWKFGEDGNKYFR 287

Query:   209 HATGQIYAISKDLATYISAHTP 230
             HATGQIYAISKDLA YIS + P
Sbjct:   288 HATGQIYAISKDLANYISINQP 309

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0048531 "beta-1,3-galactosyltransferase activity" evidence=IDA

TAIR|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)]

 Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
 Identities = 148/229 (64%), Positives = 185/229 (80%)

Query:     2 TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
             +LDK++S L+ QL+A  + +   +  +   T   TE    + KVF V+GI TAFSSRKRR
Sbjct:    87 SLDKSVSMLQKQLSATHSPQ---QIVNVSATNSSTEG-NQKNKVFMVIGINTAFSSRKRR 142

Query:    62 DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
             DS+RETWMP+G+ L KLE EKGI+++F+IGHS+T   +LD+ ID+ED Q+ DF RL+H+E
Sbjct:   143 DSLRETWMPQGEKLEKLEKEKGIVVKFMIGHSSTPNSMLDKEIDSEDAQYNDFFRLDHVE 202

Query:   122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
             GY+ LS+KT+ +FS+AVAKWDA+FY+K+DDDVHVNLG + STLA HRSKPRVYIGCMKSG
Sbjct:   203 GYYNLSAKTKSFFSSAVAKWDAEFYVKIDDDVHVNLGTLASTLASHRSKPRVYIGCMKSG 262

Query:   182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHTP 230
             PVL +K  KY EPE+WKFGEEGNKYFRHATGQIYAISKDLATYIS + P
Sbjct:   263 PVLTKKTAKYREPEFWKFGEEGNKYFRHATGQIYAISKDLATYISNNQP 311

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)]

 Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
 Identities = 148/223 (66%), Positives = 177/223 (79%)

Query:     3 LDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRRD 62
             LDK+IS+LEM+L AARA      E   +  K    N   +RK F V+GI TAFSSRKRRD
Sbjct:    79 LDKSISNLEMKLVAARA------ERESLSGKFNISNEAKKRKYFMVIGINTAFSSRKRRD 132

Query:    63 SIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEG 122
             S+R TWMP+G+ L KLE EKGII+RFVIGHS  + G+LD+AI+AE++ H DFLRL H EG
Sbjct:   133 SVRSTWMPQGENLKKLEEEKGIIVRFVIGHSVLSHGILDKAIEAEEKTHGDFLRLEHTEG 192

Query:   123 YHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGP 182
             Y +LS+KT+ +F+TAV+ WDA+FYIKVDDDVHVNL  +   L+ H++KPRVY+GCMKSGP
Sbjct:   193 YMKLSAKTKTFFATAVSLWDAEFYIKVDDDVHVNLASLKKALSAHQNKPRVYVGCMKSGP 252

Query:   183 VLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYI 225
             VL +K VKYHEPEYWKFGE GNKYFRHATGQ YAISKDLATYI
Sbjct:   253 VLARKSVKYHEPEYWKFGEVGNKYFRHATGQFYAISKDLATYI 295

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2154247 AT5G53340 [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 99/223 (44%), Positives = 151/223 (67%)

Query:     5 KTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRRDSI 64
             KT+++LEM+L++AR  +G   + SP +   GTE    +++   V+GI+T+  ++K+RD++
Sbjct:    76 KTLAALEMELSSARQ-EGFVSK-SPKLAD-GTET---KKRPLVVIGIMTSLGNKKKRDAV 129

Query:    65 RETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHI-EGY 123
             R+ WM  G  L KLE+EKG+I RFVIG SA  G  +D++ID E+ Q  DF+ L+ + E  
Sbjct:   130 RQAWMGTGASLKKLESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFIILDDVVEAP 189

Query:   124 HELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPV 183
              E S K +++F+ A  +WDA FY K  D+++VN+  +G+TLA H   PR YIGCMKSG V
Sbjct:   190 EEASKKVKLFFAYAADRWDAQFYAKAIDNIYVNIDALGTTLAAHLENPRAYIGCMKSGEV 249

Query:   184 LGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS 226
               +   K++EPE+WKFG++   YFRHA G++Y I+  LA ++S
Sbjct:   250 FSEPNHKWYEPEWWKFGDK-KAYFRHAYGEMYVITHALARFVS 291

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2116627 AT4G32120 [Arabidopsis thaliana (taxid:3702)]

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 101/229 (44%), Positives = 150/229 (65%)

Query:     3 LDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRRD 62
             L++ I   EM+LA A++ +G  ++    V+  G       +K+  V+G+ T F S  +R+
Sbjct:    85 LERRIVETEMELAQAKS-QGYLKKQKS-VSSSG-------KKMLAVIGVYTGFGSHLKRN 135

Query:    63 SIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRL-NHIE 121
               R +WMP+ D L KLE E+G+++RFVIG SA  G  LDR ID E+   KDFL L NH E
Sbjct:   136 KFRGSWMPRDDALKKLE-ERGVVIRFVIGRSANRGDSLDRKIDEENRATKDFLILENHEE 194

Query:   122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNL-GMVGSTLARHRSKPRVYIGCMKS 180
                EL  K + ++S AV  WDA+FY+KVDD+V ++L GM+ + L   RS+   YIGCMKS
Sbjct:   195 AQEELPKKVKFFYSAAVQNWDAEFYVKVDDNVDLDLEGMI-ALLESRRSQDGAYIGCMKS 253

Query:   181 GPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHT 229
             G V+ ++G +++EPE+WKFG++   YFRHATG +  +SK+LA Y++ ++
Sbjct:   254 GDVITEEGSQWYEPEWWKFGDD-KSYFRHATGSLVILSKNLAQYVNINS 301

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

TAIR|locus:2059531 AT2G25300 [Arabidopsis thaliana (taxid:3702)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 102/229 (44%), Positives = 149/229 (65%)

Query:     3 LDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRRD 62
             L++ I   EM+L  A++ +G  +       K G+ + K   K+  V+G+ + F S  RR+
Sbjct:    86 LERRIVETEMELTLAKS-QGYLKNL-----KSGSSSGK---KLLAVIGVYSGFGSHLRRN 136

Query:    63 SIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRL-NHIE 121
             + R ++MP+GD L KLE E+GI++RFVIG S   G  LDR ID E++  KDFL L NH E
Sbjct:   137 TFRGSYMPQGDALRKLE-ERGIVIRFVIGRSPNRGDSLDRKIDEENQARKDFLILENHEE 195

Query:   122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNL-GMVGSTLARHRSKPRVYIGCMKS 180
                EL+ K + +FS AV  WDA+FYIKVDD++ ++L G++G  L   R +   YIGCMKS
Sbjct:   196 AQEELAKKVKFFFSAAVQNWDAEFYIKVDDNIDLDLEGLIG-LLESRRGQDAAYIGCMKS 254

Query:   181 GPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHT 229
             G V+ ++G K++EPE+WKFG+E   YFRHA G +  +SK LA Y++ ++
Sbjct:   255 GEVVAEEGGKWYEPEWWKFGDE-KSYFRHAAGSLLILSKTLAQYVNINS 302

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9MAP8	B3GT6_ARATH	2, ., 4, ., 1, ., -	0.8193	0.9869	0.5689	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00000488001 SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (405 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	230
PLN03193	408	PLN03193, PLN03193, beta-1,3-galactosyltransferase	1e-134
pfam01762	196	pfam01762, Galactosyl_T, Galactosyltransferase	5e-47
pfam13334	89	pfam13334, DUF4094, Domain of unknown function (DU	1e-06

>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional

 Score =  382 bits (983), Expect = e-134
 Identities = 163/225 (72%), Positives = 188/225 (83%)

Query: 2   TLDKTISSLEMQLAAARAAKGDTEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRR 61
           TLDKTIS+LEM+LAAARAA+      SPI   L       +R+   V+GI TAFSSRKRR
Sbjct: 96  TLDKTISNLEMELAAARAAQESILNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRR 155

Query: 62  DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE 121
           DS+R TWMP+G+   KLE EKGII+RFVIGHSAT+GG+LDRAI+AED +H DFLRL+H+E
Sbjct: 156 DSVRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVE 215

Query: 122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSG 181
           GY ELS+KT+ YF+TAVA WDADFY+KVDDDVHVN+  +G TL RHR KPRVYIGCMKSG
Sbjct: 216 GYLELSAKTKTYFATAVAMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSG 275

Query: 182 PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS 226
           PVL QKGV+YHEPEYWKFGE GNKYFRHATGQ+YAISKDLA+YIS
Sbjct: 276 PVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYIS 320

Length = 408

>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase

 Score =  153 bits (389), Expect = 5e-47
 Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 14/174 (8%)

Query: 59  KRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLN 118
            RR++IR+TWM KG+          I   F++G SA   G +   +  E + + D + ++
Sbjct: 1   ARRNAIRKTWMNKGNSEGG-----RIKSLFLVGLSADTDGKVKDLVMEEAKLYGDIVVVD 55

Query: 119 HIEGYHELSSKTQIYFSTAVAKWD-ADFYIKVDDDVHVNLGMVGSTLARH---RSKPRVY 174
             + Y  L+ KT      AV+K   A +  K+DDDV+     + S L R     S+   Y
Sbjct: 56  FEDTYENLTFKTLTGLLYAVSKAPSAKYIGKIDDDVYFFPDKLLSLLDRGNINPSESSFY 115

Query: 175 IGCMKSGPVLGQKGVK-YHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISA 227
              MK GPV+  K  K Y  P  +        Y  +A+G  Y +S+D A  +  
Sbjct: 116 GYVMKEGPVIRNKKSKWYVPPSDYPCSR----YPPYASGPFYLLSRDAAELLLK 165

This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. Length = 196

>gnl|CDD|222051 pfam13334, DUF4094, Domain of unknown function (DUF4094)

 Score = 44.6 bits (106), Expect = 1e-06
 Identities = 15/20 (75%), Positives = 18/20 (90%)

Query: 1  MTLDKTISSLEMQLAAARAA 20
           +LDKTISSLEM+LAAAR+ 
Sbjct: 70 QSLDKTISSLEMELAAARSE 89

This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. Length = 89

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	230
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2287	349	consensus Galactosyltransferases [Carbohydrate tra	100.0
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	100.0
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	100.0
KOG2288	274	consensus Galactosyltransferases [Carbohydrate tra	100.0
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	100.0
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	99.57
KOG2246	364	consensus Galactosyltransferases [Carbohydrate tra	99.37
PLN03153	537	hypothetical protein; Provisional	98.7
KOG3708	681	consensus Uncharacterized conserved protein [Funct	96.85
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	95.27
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	95.22
PF01755	200	Glyco_transf_25: Glycosyltransferase family 25 (LP	95.21
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	95.07
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	94.47
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	92.41
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	91.47
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	91.0
cd06532	128	Glyco_transf_25 Glycosyltransferase family 25 [lip	90.17
PRK11204	420	N-glycosyltransferase; Provisional	89.98
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	88.86
cd04179	185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	88.72
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	88.24
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	87.8
PRK14583	444	hmsR N-glycosyltransferase; Provisional	87.64
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	86.28
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	85.85
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	85.83
COG1215	439	Glycosyltransferases, probably involved in cell wa	85.8
PRK10714	325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	85.25
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	84.11
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	82.78
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	80.78

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=8.1e-57  Score=406.37  Aligned_cols=226  Identities=72%  Similarity=1.173  Sum_probs=199.2

Q ss_pred             ccchhHHHHHHhHHHHHhhccC--CCCCCccccccccCccccCCceeEEEEEEcCCCCHHHHHHHHHhhccCCcCccccc
Q 026972            2 TLDKTISSLEMQLAAARAAKGD--TEEASPIVTKLGTENLKARRKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLE   79 (230)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~~   79 (230)
                      +|+|+||.|||||+++++. ++  +++ .|.+++.++.+...+++++++|+|+|+|++++||++||+||+++...+.++.
T Consensus        96 ~~~~~~~~le~el~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~LvIgI~Sap~~~~RR~AIR~TWg~~~~~~~kle  173 (408)
T PLN03193         96 TLDKTISNLEMELAAARAA-QESILNG-SPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLE  173 (408)
T ss_pred             HHhhhhhHHhHHHHHHHhh-hhhhccC-CCccccccccCCCCcceEEEEEEEeCCCCCHHHHHHHHHHHcCCcccccccc
Confidence            6899999999999999997 44  444 3665555556777888899999999999999999999999999875545555


Q ss_pred             CCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHH
Q 026972           80 NEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGM  159 (230)
Q Consensus        80 ~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~  159 (230)
                      ...+++++||+|.+.+.+..++++|.+|+++|||||++||.|+|.||++||+++|+|+.++++++|+||+|||+|||+++
T Consensus       174 ~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAkF~mK~DDDvfVnv~~  253 (408)
T PLN03193        174 EEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFYVKVDDDVHVNIAT  253 (408)
T ss_pred             cCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEecccccccchHHHHHHHHHHHHcCCCeEEEEcCCCceEcHHH
Confidence            56789999999998755678889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCceEEEEeecCccccCCCCccccccccccCCCCCCCCcCcccceeeeCHHHHHHHHhcC
Q 026972          160 VGSTLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHT  229 (230)
Q Consensus       160 L~~~L~~~~~~~~~y~G~~~~~~v~r~~~~K~~v~~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~~n~  229 (230)
                      |+.+|..+...+++|+||+..+|+++.+..||+.|++|+|+++++.|||||+|++||||+|+|+.|+.|.
T Consensus       254 L~~~L~~~~~~~rlYiG~m~~gPvr~~~~~ky~epe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~~n~  323 (408)
T PLN03193        254 LGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYISINQ  323 (408)
T ss_pred             HHHHHHhcCCCCCEEEEecccCccccCCCCcCcCcccccccCccccCCCCCCcceEEehHHHHHHHHhCh
Confidence            9999988766668999999877665555677888888888888999999999999999999999999774

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.9e-47  Score=344.31  Aligned_cols=182  Identities=24%  Similarity=0.305  Sum_probs=165.6

Q ss_pred             cccCCc--eeEEEEEEcCCCCHHHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEE
Q 026972           39 LKARRK--VFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLR  116 (230)
Q Consensus        39 ~~~~~~--~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~  116 (230)
                      ..|...  ++++++|+|++++++||++||+|||++..     ..+..++++|+||.+++.+ .+++.|++|++.||||||
T Consensus        87 ~~~~~~~~~~lLl~V~S~~~~farR~aiR~TW~~~~~-----v~~~~v~~~FLvG~~~~~~-~~~~~l~~Ea~~ygDIi~  160 (349)
T KOG2287|consen   87 EICDPDRPPELLLLVKSAPDNFARRNAIRKTWGNENN-----VRGGRVRVLFLVGLPSNED-KLNKLLADEARLYGDIIQ  160 (349)
T ss_pred             hhhcCCCCceEEEEEecCCCCHHHHHHHHHHhcCccc-----cCCCcEEEEEEecCCCcHH-HHHHHHHHHHHHhCCEEE
Confidence            334444  79999999999999999999999999863     3567899999999998544 668999999999999999


Q ss_pred             EecccccCcchHHHHHHHHHHHh-cCCceEEEEecCceeEeHHHHHHHHhcc-CCCCceEEEEee-cCccccCCCCcccc
Q 026972          117 LNHIEGYHELSSKTQIYFSTAVA-KWDADFYIKVDDDVHVNLGMVGSTLARH-RSKPRVYIGCMK-SGPVLGQKGVKYHE  193 (230)
Q Consensus       117 ~d~~D~y~nlt~Ktl~~l~w~~~-~~~~~fvlK~DDD~fvn~~~L~~~L~~~-~~~~~~y~G~~~-~~~v~r~~~~K~~v  193 (230)
                      +||.|+|.|+|+|++++++|+.+ |++++|++|+|||+||++++|+++|... .+.+.+|.|.+. ..+|+|++.+||||
T Consensus       161 ~df~Dty~nltlKtl~~l~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~~~~~~~~~~~G~v~~~~~p~R~~~~KwyV  240 (349)
T KOG2287|consen  161 VDFEDTYFNLTLKTLAILLWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDKLNDPSSDLYYGRVIQNAPPIRDKTSKWYV  240 (349)
T ss_pred             EecccchhchHHHHHHHHHHHHhcCCcceEEEeccCceEEcHHHHHHHHhccCCCCcceEEEeecccCCCCCCCCCCCcc
Confidence            99999999999999999999998 8999999999999999999999999998 778889999975 56899999999999


Q ss_pred             ccccccCCCCCCCCcCcccceeeeCHHHHHHHHhcC
Q 026972          194 PEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHT  229 (230)
Q Consensus       194 ~~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~~n~  229 (230)
                      |+..   ||.+.|||||+|+|||||+++|+.|+++.
T Consensus       241 p~~~---y~~~~YP~Y~sG~gYvis~~~a~~l~~~s  273 (349)
T KOG2287|consen  241 PESE---YPCSVYPPYASGPGYVISGDAARRLLKAS  273 (349)
T ss_pred             CHHH---CCCCCCCCcCCCceeEecHHHHHHHHHHh
Confidence            9764   78899999999999999999999999753

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=3.1e-47  Score=361.41  Aligned_cols=180  Identities=19%  Similarity=0.278  Sum_probs=162.3

Q ss_pred             ccccCCceeEEEEEEcCCCCHHHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEE
Q 026972           38 NLKARRKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRL  117 (230)
Q Consensus        38 ~~~~~~~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~  117 (230)
                      +-++.++++|+|+|+|+|+|++||++||+|||+...     ..+..++++|+||.+.  +..+++.|.+|+++||||||+
T Consensus       378 pL~~~~~~~LlI~V~Sap~nf~rR~AIR~TWg~~~~-----~~~~~v~~rFvVG~s~--n~~l~~~L~~Ea~~ygDIIq~  450 (636)
T PLN03133        378 PLSPKKPLDLFIGVFSTANNFKRRMAVRRTWMQYDA-----VRSGAVAVRFFVGLHK--NQMVNEELWNEARTYGDIQLM  450 (636)
T ss_pred             CCCCCCceEEEEEEeCCcccHHHHHHHHHhhccccc-----cCCCceEEEEEEecCC--cHHHHHHHHHHHHHcCCeEEE
Confidence            344567899999999999999999999999998642     2345689999999986  567889999999999999999


Q ss_pred             ecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhccCCCCceEEEEee-cCccccCCCCccccccc
Q 026972          118 NHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMK-SGPVLGQKGVKYHEPEY  196 (230)
Q Consensus       118 d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~~~~~y~G~~~-~~~v~r~~~~K~~v~~~  196 (230)
                      ||.|+|+|||+||++++.|+..|++++|+||+|||+|||+++|+++|......+++|+|++. ...|+|++.+|||||.+
T Consensus       451 dF~DsY~NLTlKtl~~~~wa~~c~~akFilK~DDDvFVnv~~Ll~~L~~~~~~~~Ly~G~v~~~~~PiRd~~sKWYVs~~  530 (636)
T PLN03133        451 PFVDYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPE  530 (636)
T ss_pred             eeechhhhhHHHHHHHHHHHHhCCCceEEEEcCCceEEcHHHHHHHHHhcCCCCceEEEEeccCCCcccCCCCCCCCCHH
Confidence            99999999999999999999889999999999999999999999999876666789999986 56799999999999976


Q ss_pred             cccCCCCCCCCcCcccceeeeCHHHHHHHHh
Q 026972          197 WKFGEEGNKYFRHATGQIYAISKDLATYISA  227 (230)
Q Consensus       197 ~~~~y~~~~yPpy~~G~~YimS~dl~~~i~~  227 (230)
                      .   ||.+.|||||+|+|||||+|+|+.|++
T Consensus       531 e---yp~~~YPpYasG~gYVlS~Dla~~L~~  558 (636)
T PLN03133        531 E---WPEETYPPWAHGPGYVVSRDIAKEVYK  558 (636)
T ss_pred             H---CCCCCCCCCCCcCEEEEcHHHHHHHHH
Confidence            4   688999999999999999999999975

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=9.4e-45  Score=302.88  Aligned_cols=162  Identities=29%  Similarity=0.404  Sum_probs=143.8

Q ss_pred             HHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEecccccCcchHHHHHHHHHHH
Q 026972           59 KRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAV  138 (230)
Q Consensus        59 ~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~y~nlt~Ktl~~l~w~~  138 (230)
                      +||++||+||+++..     ....+++++||||.+++.+..+++.|.+|+++||||||+||.|+|+|+++|++++++|+.
T Consensus         1 ~rR~~IR~TW~~~~~-----~~~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~d~~D~y~nlt~K~~~~~~w~~   75 (195)
T PF01762_consen    1 ERRQAIRETWGNQRN-----FKGVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQGDFVDSYRNLTLKTLAGLKWAS   75 (195)
T ss_pred             ChHHHHHHHHhcccc-----cCCCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEeeecccccchhhHHHHHHHHHHH
Confidence            589999999999863     235799999999999855677888899999999999999999999999999999999999


Q ss_pred             h-cCCceEEEEecCceeEeHHHHHHHHhcc--CCCCc-eEEEEeecCccccCCCCccccccccccCCCCCCCCcCcccce
Q 026972          139 A-KWDADFYIKVDDDVHVNLGMVGSTLARH--RSKPR-VYIGCMKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQI  214 (230)
Q Consensus       139 ~-~~~~~fvlK~DDD~fvn~~~L~~~L~~~--~~~~~-~y~G~~~~~~v~r~~~~K~~v~~~~~~~y~~~~yPpy~~G~~  214 (230)
                      + |++++|++|+|||+|||+++|.++|...  ...++ +++++...++|+|++.+|||+|...   ||.+.|||||+|+|
T Consensus        76 ~~c~~~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~~~~kw~v~~~~---y~~~~yP~y~~G~~  152 (195)
T PF01762_consen   76 KHCPNAKYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKNGPPIRDPSSKWYVSEEE---YPDDYYPPYCSGGG  152 (195)
T ss_pred             hhCCchhheeecCcEEEEehHHhhhhhhhcccCccccccccccccCCccccccccCceeeeee---cccccCCCcCCCCe
Confidence            9 6679999999999999999999999987  33334 4444566788999999999999865   68899999999999


Q ss_pred             eeeCHHHHHHHHhc
Q 026972          215 YAISKDLATYISAH  228 (230)
Q Consensus       215 YimS~dl~~~i~~n  228 (230)
                      |+||+++|+.|+++
T Consensus       153 yvls~~~v~~i~~~  166 (195)
T PF01762_consen  153 YVLSSDVVKRIYKA  166 (195)
T ss_pred             EEecHHHHHHHHHH
Confidence            99999999999875

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.6e-41  Score=284.94  Aligned_cols=186  Identities=66%  Similarity=1.119  Sum_probs=174.7

Q ss_pred             CCceeEEEEEEcCCCCHHHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEe-cc
Q 026972           42 RRKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLN-HI  120 (230)
Q Consensus        42 ~~~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d-~~  120 (230)
                      +++++++|+|.|++++.+||+.+|+||+..+..+.++++..++.++|++|... .+.+...+|.+|.++|+|.+.+| .+
T Consensus         8 ~~k~l~vigI~T~f~s~~RR~~vR~TWmp~~~~l~rle~e~gv~~RFvIG~~~-~g~~~~r~ie~E~~~~~DfllLd~h~   86 (274)
T KOG2288|consen    8 RRKVLLVIGINTAFSSRKRRDSVRQTWMPSGEGLKRLEEEKGVIIRFVIGTAT-LGASLDRALEEENAQHGDFLLLDRHE   86 (274)
T ss_pred             ccceEEEEEeecccchhhhHHHHHHhhcCCccchhhhccccceEEEEEeccCC-ccHHHHHHHHHHHHhcCCeEeechhH
Confidence            78999999999999999999999999999988888888899999999999943 36788899999999999999999 99


Q ss_pred             cccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhccCCCCceEEEEeecCccccCCCCccccccccccC
Q 026972          121 EGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKFG  200 (230)
Q Consensus       121 D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~~~~~y~G~~~~~~v~r~~~~K~~v~~~~~~~  200 (230)
                      |+|.+|+.||+.+|.++..+++++|++|+|||+|||+..|...|......+++|+||+++++++-++++|||.|+ |+|+
T Consensus        87 E~Y~~Ls~Kt~~~f~~A~~~~daeFyvKvDDDv~v~l~~L~~~la~~r~~pr~YiGcmksg~v~~~~~~kw~Epe-Wkfg  165 (274)
T KOG2288|consen   87 EAYEELSAKTKAFFSAAVAHWDAEFYVKVDDDVYVRLARLGTLLARERSHPRLYIGCMKSGPVLTQPGGKWYEPE-WKFG  165 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccceEEEEccccceecHHHHHHHHHhhccCCceEEEEecCCccccCCCCcccChh-hhcC
Confidence            999999999999999999999999999999999999999999999988789999999999999999999999999 8997


Q ss_pred             CCCCCCCcCcccceeeeCHHHHHHHHhcCC
Q 026972          201 EEGNKYFRHATGQIYAISKDLATYISAHTP  230 (230)
Q Consensus       201 y~~~~yPpy~~G~~YimS~dl~~~i~~n~~  230 (230)
                      ..+. |.||+.|++|+||++++..|+.|.+
T Consensus       166 ~~g~-YfrhA~G~~YvlS~dLa~yi~in~~  194 (274)
T KOG2288|consen  166 DNGN-YFRHATGGGYVLSKDLATYISINRQ  194 (274)
T ss_pred             cccc-cchhccCceEEeeHHHHHHHHHhHH
Confidence            6555 9999999999999999999998863

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=100.00  E-value=7e-34  Score=254.20  Aligned_cols=170  Identities=18%  Similarity=0.274  Sum_probs=142.5

Q ss_pred             cCCceeEEEEEEcCCCC--HHHHHHHHHhhccCCcCcccccC-CCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEE
Q 026972           41 ARRKVFFVMGIITAFSS--RKRRDSIRETWMPKGDGLLKLEN-EKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRL  117 (230)
Q Consensus        41 ~~~~~~lli~V~S~~~~--~~rR~~IR~TW~~~~~~~~~~~~-~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~  117 (230)
                      .+++..++++|+|..++  +.||+++|+||.+-.....+..+ ...+.++|+||.+++.+.+.+++|.+|+++|||||++
T Consensus        76 ~~~~~lv~~Gi~S~d~~~r~~rR~lqr~t~w~y~~va~~~n~ftg~~lv~y~l~~H~~~~~~~~~~L~eEA~~~~DIVil  155 (382)
T PTZ00210         76 KAQRFLAVLGIPSVDNSERSRRRDLQRQTCWKYSGVATRSNNFSGSLLPLYLLAPHQSNSYLISHSLKEEAARTHDIITL  155 (382)
T ss_pred             ccCCceEEEeccCCCchHHHHHHHHHHhhhhcchhhhhhccCCchhhhhhhhhccCCccchhhhHHHHHHHHHhCCEEEE
Confidence            45677888999999987  89999999999987543222211 2356789999999987789999999999999999999


Q ss_pred             ec------------------ccccCcchHHHHHHHHHHHh-cCCceEEEEecCceeEeHHHHHHHHhccCCCCceEEEEe
Q 026972          118 NH------------------IEGYHELSSKTQIYFSTAVA-KWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCM  178 (230)
Q Consensus       118 d~------------------~D~y~nlt~Ktl~~l~w~~~-~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~~~~~y~G~~  178 (230)
                      ||                  .|++.|+++||+++++|+.. ||+++|++|+|||+||++++++++|+.. +...+|+|.+
T Consensus       156 pf~d~~~tTnKkiG~~g~WG~e~e~~mT~KT~l~~~wA~~~cP~a~YImKgDDDvFVrVp~lL~~Lr~~-prr~LY~G~v  234 (382)
T PTZ00210        156 PTNDVSPSTRKKIGENGNWGIEAEVAMSRKTYLWLRFALHMFPNVSYIVKGDDDIFIRVPKYLADLRVM-PRHGLYMGRY  234 (382)
T ss_pred             ecccCccccccccccCCcccchhhcchhHHHHHHHHHHHHhCCCCCeEEEcCCCeEeeHHHHHHHHhhC-CCCceEEEee
Confidence            99                  66778899999999999999 7899999999999999999999999765 5556999986


Q ss_pred             ec-CccccCCCCccccccccccCCCCCCCCcCcccceeeeCHHHHHHHHhcC
Q 026972          179 KS-GPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAHT  229 (230)
Q Consensus       179 ~~-~~v~r~~~~K~~v~~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~~n~  229 (230)
                      .. ..+.|                  +.+||||+|+||+||+|+|+.|++..
T Consensus       235 ~~~~~p~R------------------d~~PpY~~G~gYvLSrDVA~~Lvs~~  268 (382)
T PTZ00210        235 NYYNRIWR------------------RNQLTYVNGYCITLSRDTAQAIISYK  268 (382)
T ss_pred             CCCCcccc------------------CCCCCccccceeeccHHHHHHHHhhC
Confidence            42 22222                  24699999999999999999999864

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=99.57  E-value=6e-15  Score=128.22  Aligned_cols=156  Identities=18%  Similarity=0.258  Sum_probs=79.7

Q ss_pred             eeEEEEEEcCCCCHHHH-HHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEeccccc
Q 026972           45 VFFVMGIITAFSSRKRR-DSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGY  123 (230)
Q Consensus        45 ~~lli~V~S~~~~~~rR-~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~y  123 (230)
                      -.++|+|+|++++.+.| .+|++||++...         ..  .|+.....  +    ..|..+  ...+++..+...++
T Consensus         6 ~dI~i~V~T~~k~h~tR~~~I~~TW~~~~~---------~~--~~ifsd~~--d----~~l~~~--~~~~l~~~~~~~~~   66 (252)
T PF02434_consen    6 DDIFIAVKTTKKFHKTRAPAIKQTWAKRCN---------KQ--TFIFSDAE--D----PSLPTV--TGVHLVNPNCDAGH   66 (252)
T ss_dssp             GGEEEEEE--GGGTTTTHHHHHHTGGGGSG---------GG--EEEEESS--------HHHHHH--HGGGEEE-------
T ss_pred             ccEEEEEEeCHHHHHHHHHHHHHHHHhhcC---------Cc--eEEecCcc--c----cccccc--cccccccCCCcchh
Confidence            35899999999876555 899999999863         11  35433322  1    223222  33456666666655


Q ss_pred             CcchHHHHHHHHHHHh-cCCceEEEEecCceeEeHHHHHHHHhccCCCCceEEEEeecCccccCCCCccccccccccCCC
Q 026972          124 HELSSKTQIYFSTAVA-KWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKFGEE  202 (230)
Q Consensus       124 ~nlt~Ktl~~l~w~~~-~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~~~~~y~G~~~~~~v~r~~~~K~~v~~~~~~~y~  202 (230)
                      ....++.+.++.+-.. .++.+|++++|||+||++++|.++|...++.+++|+|+.....+.... .+ .-+..     .
T Consensus        67 ~~~~~~~~~~~~y~~~~~~~~~Wf~~~DDDtyv~~~~L~~~L~~~~~~~~~yiG~~~~~~~~~~~-~~-~~~~~-----~  139 (252)
T PF02434_consen   67 CRKTLSCKMAYEYDHFLNSDKDWFCFADDDTYVNVENLRRLLSKYDPSEPIYIGRPSGDRPIEII-HR-FNPNK-----S  139 (252)
T ss_dssp             ------HHHHHHHHHHHHHT-SEEEEEETTEEE-HHHHHHHHTTS-TTS--EEE-EE-----------------------
T ss_pred             hHHHHHHHHHHHHHhhhcCCceEEEEEeCCceecHHHHHHHHhhCCCccCEEeeeeccCccceee-cc-ccccc-----c
Confidence            4444444444343222 368899999999999999999999999998899999986433222110 00 00000     0


Q ss_pred             CCCCCcCc-ccceeeeCHHHHHHHH
Q 026972          203 GNKYFRHA-TGQIYAISKDLATYIS  226 (230)
Q Consensus       203 ~~~yPpy~-~G~~YimS~dl~~~i~  226 (230)
                      ...-..|+ +|+||+||+.++++|.
T Consensus       140 ~~~~~~f~~GGaG~vlSr~~~~k~~  164 (252)
T PF02434_consen  140 KDSGFWFATGGAGYVLSRALLKKMS  164 (252)
T ss_dssp             ------EE-GGG-EEEEHHHHHHHH
T ss_pred             CcCceEeeCCCeeHHHhHHHHHHHh
Confidence            01122344 6799999999999994

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=99.37  E-value=3.8e-12  Score=115.83  Aligned_cols=143  Identities=23%  Similarity=0.314  Sum_probs=107.9

Q ss_pred             ccccCCceeEEEEEEcCCCCHHHH-HHHHHhhccCCcCcccccCCCceEEEEEe---ecCCCCCchhhhhHHHHHhhCCc
Q 026972           38 NLKARRKVFFVMGIITAFSSRKRR-DSIRETWMPKGDGLLKLENEKGIIMRFVI---GHSATAGGVLDRAIDAEDEQHKD  113 (230)
Q Consensus        38 ~~~~~~~~~lli~V~S~~~~~~rR-~~IR~TW~~~~~~~~~~~~~~~v~~~Fvv---G~~~~~~~~~~~~l~~E~~~~gD  113 (230)
                      +.--..+.++++.|.|.+.+..-| ..+-+||++.+..           ..|+-   .+..   .           .+. 
T Consensus        84 ~~~l~r~~~v~cwv~t~~~~~~~~~~~v~~TW~~rc~~-----------~~f~s~~~s~~~---~-----------~f~-  137 (364)
T KOG2246|consen   84 ALWLSRSGRVLCWVLTSPMRHVTRADAVKETWLKRCDK-----------GIFFSPTLSKDD---S-----------RFP-  137 (364)
T ss_pred             hhccCCCceEEEEEEecCcCceeehhhhhcccccccCc-----------ceecCccCCCCC---C-----------cCc-
Confidence            344667889999999999877766 6999999988641           12333   2221   1           111 


Q ss_pred             EEEEecccccCcchHHHHHHHHHHHhc--CCceEEEEecCceeEeHHHHHHHHhccCCCCceEEEEeecCccccCCCCcc
Q 026972          114 FLRLNHIEGYHELSSKTQIYFSTAVAK--WDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGVKY  191 (230)
Q Consensus       114 il~~d~~D~y~nlt~Ktl~~l~w~~~~--~~~~fvlK~DDD~fvn~~~L~~~L~~~~~~~~~y~G~~~~~~v~r~~~~K~  191 (230)
                      .|..+..|+|+++..|+..+++++.++  .+++|++|+|||||+.++||..+|...++.+.+|+|+..          |-
T Consensus       138 ~v~~~~~~g~~~~~~ktr~~~~yv~~~~~~~~dWf~~aDDDTy~i~eNLr~~L~~yDp~~p~YiG~~~----------~~  207 (364)
T KOG2246|consen  138 TVYYNLPDGYRSLWRKTRIAFKYVYDHILKDYDWFLKADDDTYFIMENLRYVLSKYDPEKPVYLGYRS----------KS  207 (364)
T ss_pred             eeeccCCcchHHHHHHHHHHHHHHHHhccCCCCeEEeccCCeEEeHHHHHHHHhhcCCCCcEEecccc----------cc
Confidence            447889999999999999999999863  699999999999999999999999999999999999742          11


Q ss_pred             ccccccccCCCCCCCCcCcccceeeeCHHHHHHHHh
Q 026972          192 HEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISA  227 (230)
Q Consensus       192 ~v~~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~~  227 (230)
                      +...         .|  --+|+||++|+.+.+.+++
T Consensus       208 ~~~~---------~y--~~g~ag~~ls~aa~~~la~  232 (364)
T KOG2246|consen  208 YFQN---------GY--SSGGAGYVLSFAALRRLAE  232 (364)
T ss_pred             cccc---------cc--ccCCCCcceeHHHHHHHHH
Confidence            1111         11  1467899999888777654

>PLN03153 hypothetical protein; Provisional

Probab=98.70  E-value=2.8e-07  Score=86.59  Aligned_cols=149  Identities=18%  Similarity=0.198  Sum_probs=89.1

Q ss_pred             cCCceeEEEEEEcCCCCHH-HHHHHHHhhccCCcCcccccCCCceE-EEEEeecCCCC--CchhhhhHHHHHhhCCcEEE
Q 026972           41 ARRKVFFVMGIITAFSSRK-RRDSIRETWMPKGDGLLKLENEKGII-MRFVIGHSATA--GGVLDRAIDAEDEQHKDFLR  116 (230)
Q Consensus        41 ~~~~~~lli~V~S~~~~~~-rR~~IR~TW~~~~~~~~~~~~~~~v~-~~FvvG~~~~~--~~~~~~~l~~E~~~~gDil~  116 (230)
                      ...--.++++|.++.+..+ |+..|+.+|....           ++ .+|+.....+.  +..+.           -|. 
T Consensus       118 ~t~~~hIvF~I~~s~~~w~~R~~yik~wW~p~~-----------~rg~v~ld~~~~~~~~~~~~P-----------~i~-  174 (537)
T PLN03153        118 ELSLNHIMFGIAGSSQLWKRRKELVRLWWRPNQ-----------MRGHVWLEEQVSPEEGDDSLP-----------PIM-  174 (537)
T ss_pred             CCccccEEEEEEEchhhhhhhhhhhhhhcCccc-----------ceeEEEecccCCCCCCcCCCC-----------CEE-
Confidence            3445568999999888775 5589999998642           22 34554443210  11110           011 


Q ss_pred             Eecccc---cCc---chHH--HHHHHHHHHh--cCCceEEEEecCceeEeHHHHHHHHhccCCCCceEEEEeecCccccC
Q 026972          117 LNHIEG---YHE---LSSK--TQIYFSTAVA--KWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQ  186 (230)
Q Consensus       117 ~d~~D~---y~n---lt~K--tl~~l~w~~~--~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~~~~~y~G~~~~~~v~r~  186 (230)
                      +.-.-+   |.|   ....  +..+......  .++++|++++|||+|+.+++|+.+|...++.+..|+|......    
T Consensus       175 is~d~s~f~y~~~~Gh~sa~rI~rmv~et~~~~~pd~kWfVf~DDDTyf~~~NLv~~Ls~YDptkp~YIGs~Se~~----  250 (537)
T PLN03153        175 VSEDTSRFRYTNPTGHPSGLRISRIVLESFRLGLPDVRWFVLGDDDTIFNADNLVAVLSKYDPSEMVYVGGPSESH----  250 (537)
T ss_pred             eCCCcccccccCCCCcHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccccHHHHHHHHhhcCCCCCEEeccccccc----
Confidence            110011   222   1221  1112222222  4899999999999999999999999999999999999653110    


Q ss_pred             CCCccccccccccCCCCCCCCcCcccceeeeCHHHHHHHHhc
Q 026972          187 KGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISAH  228 (230)
Q Consensus       187 ~~~K~~v~~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~~n  228 (230)
                             .....|+|   .|  ..+|+||+||+.+++.|.++
T Consensus       251 -------~qn~~f~~---~f--A~GGAG~~LSrPLae~L~~~  280 (537)
T PLN03153        251 -------SANSYFSH---NM--AFGGGGIAISYPLAEALSRI  280 (537)
T ss_pred             -------cccccccc---cc--ccCCceEEEcHHHHHHHHHH
Confidence                   00000100   11  15899999999999998764

>KOG3708 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.85  E-value=0.003  Score=59.57  Aligned_cols=74  Identities=14%  Similarity=0.187  Sum_probs=57.9

Q ss_pred             HHHHHHHh--cCCceEEEEecCceeEeHHHHHHHHhccCCCCceEEEEeecCccccCCCCccccccccccCCCCCCCCcC
Q 026972          132 IYFSTAVA--KWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRH  209 (230)
Q Consensus       132 ~~l~w~~~--~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~~~~~y~G~~~~~~v~r~~~~K~~v~~~~~~~y~~~~yPpy  209 (230)
                      +.++++.+  +-+++|++-+-|++|||...|++.+.+...+.++|+|.-.             .        .++.=   
T Consensus        85 ~vl~~l~~~~~~~YDwFll~~D~tYv~a~~L~~l~~hmsin~dlymGEe~-------------~--------~gs~r---  140 (681)
T KOG3708|consen   85 MVLGLLFNMVHNNYDWFLLAKDSTYVNAFVLLRLIDHMSINEDLYMGEEA-------------E--------DGSGR---  140 (681)
T ss_pred             HHHHHHHHhhccccceEEEecCcceecHHHHHHHHhhcccccccccchhh-------------h--------CccCc---
Confidence            44556555  3699999999999999999999999999888899998310             0        00111   


Q ss_pred             c-ccceeeeCHHHHHHHHhcC
Q 026972          210 A-TGQIYAISKDLATYISAHT  229 (230)
Q Consensus       210 ~-~G~~YimS~dl~~~i~~n~  229 (230)
                      | .|.||++|+.++.+|-+|.
T Consensus       141 C~l~~G~LLS~s~l~~lrnnl  161 (681)
T KOG3708|consen  141 CRLDTGMLLSQSLLHALRNNL  161 (681)
T ss_pred             cccccceeecHHHHHHHHhhH
Confidence            6 4699999999999999885

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=95.27  E-value=0.63  Score=35.46  Aligned_cols=135  Identities=12%  Similarity=0.091  Sum_probs=66.4

Q ss_pred             ceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHH
Q 026972           83 GIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGS  162 (230)
Q Consensus        83 ~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~  162 (230)
                      .+.++++-..+.   +...+.+.+-.+....+..+...+.. ++.    .++..+.+....+|++.+|||.++..+.|..
T Consensus        27 ~~eiivvdd~s~---d~~~~~~~~~~~~~~~i~~i~~~~n~-g~~----~~~n~~~~~a~~~~i~~ld~D~~~~~~~l~~   98 (169)
T PF00535_consen   27 DFEIIVVDDGST---DETEEILEEYAESDPNIRYIRNPENL-GFS----AARNRGIKHAKGEYILFLDDDDIISPDWLEE   98 (169)
T ss_dssp             EEEEEEEECS-S---SSHHHHHHHHHCCSTTEEEEEHCCCS-HHH----HHHHHHHHH--SSEEEEEETTEEE-TTHHHH
T ss_pred             CEEEEEeccccc---cccccccccccccccccccccccccc-ccc----ccccccccccceeEEEEeCCCceEcHHHHHH
Confidence            345555554442   33344444444334566666665443 222    2333333434556999999999999986666


Q ss_pred             HHhccCC-CCceEEEEee---cC-ccccCCCC--ccccccccccCCCCCCCCcCcccceeeeCHHHHHHH
Q 026972          163 TLARHRS-KPRVYIGCMK---SG-PVLGQKGV--KYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYI  225 (230)
Q Consensus       163 ~L~~~~~-~~~~y~G~~~---~~-~v~r~~~~--K~~v~~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i  225 (230)
                      .+..... ...+.+|...   .. ........  .+..............--+++.|++.++++++.+++
T Consensus        99 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~  168 (169)
T PF00535_consen   99 LVEALEKNPPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFEEI  168 (169)
T ss_dssp             HHHHHHHCTTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHHC
T ss_pred             HHHHHHhCCCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHHhh
Confidence            6655433 3445556532   11 11111111  111110000000112334468899999999998876

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=95.22  E-value=0.52  Score=42.99  Aligned_cols=167  Identities=11%  Similarity=0.045  Sum_probs=84.0

Q ss_pred             ceeEEEEEEcCCCCHHHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCc--EEEEeccc
Q 026972           44 KVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKD--FLRLNHIE  121 (230)
Q Consensus        44 ~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gD--il~~d~~D  121 (230)
                      .+.+-|+|++.-....-.+.|+ +...+.        ...+.++++...+.  | ...+.+++=.+.|.+  +..+.-.+
T Consensus        40 ~p~VSViiP~~nee~~l~~~L~-Sl~~q~--------Yp~~EIivvdd~s~--D-~t~~iv~~~~~~~p~~~i~~v~~~~  107 (373)
T TIGR03472        40 WPPVSVLKPLHGDEPELYENLA-SFCRQD--------YPGFQMLFGVQDPD--D-PALAVVRRLRADFPDADIDLVIDAR  107 (373)
T ss_pred             CCCeEEEEECCCCChhHHHHHH-HHHhcC--------CCCeEEEEEeCCCC--C-cHHHHHHHHHHhCCCCceEEEECCC
Confidence            4556777776654443444553 344432        12367777665543  2 222333333456666  43332111


Q ss_pred             ccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhccCCCCceEEEEeecCccccCCCC--------cccc
Q 026972          122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGV--------KYHE  193 (230)
Q Consensus       122 ~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~~~~~y~G~~~~~~v~r~~~~--------K~~v  193 (230)
                       -.....|.-...+ +.+..+.+|++.+|+|+.+.++-|...+......+--.+++.....+.....+        -++.
T Consensus       108 -~~G~~~K~~~l~~-~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~~~~~v~~V~~~~~~~~~~~~~~~l~~~~~~~~~~  185 (373)
T TIGR03472       108 -RHGPNRKVSNLIN-MLPHARHDILVIADSDISVGPDYLRQVVAPLADPDVGLVTCLYRGRPVPGFWSRLGAMGINHNFL  185 (373)
T ss_pred             -CCCCChHHHHHHH-HHHhccCCEEEEECCCCCcChhHHHHHHHHhcCCCcceEeccccCCCCCCHHHHHHHHHhhhhhh
Confidence             1233356655444 34456899999999999999888877776653222112222211111000000        1112


Q ss_pred             ccccccCCCCCCCCcCcccceeeeCHHHHHHHH
Q 026972          194 PEYWKFGEEGNKYFRHATGQIYAISKDLATYIS  226 (230)
Q Consensus       194 ~~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~  226 (230)
                      |... .... ..-+.+|.|+++++.+++.+.+.
T Consensus       186 ~~~~-~~~~-~~~~~~~~G~~~a~RR~~l~~iG  216 (373)
T TIGR03472       186 PSVM-VARA-LGRARFCFGATMALRRATLEAIG  216 (373)
T ss_pred             HHHH-HHHh-ccCCccccChhhheeHHHHHHcC
Confidence            2100 0000 01134589999999999998874

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=95.21  E-value=0.47  Score=38.98  Aligned_cols=93  Identities=16%  Similarity=0.100  Sum_probs=51.9

Q ss_pred             EEEEcCCCCHHHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEE-----eccccc
Q 026972           49 MGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRL-----NHIEGY  123 (230)
Q Consensus        49 i~V~S~~~~~~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~-----d~~D~y  123 (230)
                      |.|.|=+...+||+.+.+.....           ++.+-|+-|........     .+....+..-...     .+.-+-
T Consensus         4 i~vInL~~~~~Rr~~~~~~~~~~-----------~~~~e~~~Avdg~~l~~-----~~~~~~~~~~~~~~~~~~~lt~gE   67 (200)
T PF01755_consen    4 IYVINLDRSTERRERIQQQLAKL-----------GINFEFFDAVDGRDLSE-----DELFRRYDPELFKKRYGRPLTPGE   67 (200)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHc-----------CCceEEEEeecccccch-----HHHHHHhhhhhhhccccccCCcce
Confidence            45777888899999998887654           23445666665421111     0111112111110     111111


Q ss_pred             CcchHHHHHHHHHHHhcCCceEEEEecCceeEeHH
Q 026972          124 HELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLG  158 (230)
Q Consensus       124 ~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~  158 (230)
                      -.-.+-.+..|+-+.+ .+.++++-.-||+.++.+
T Consensus        68 iGC~lSH~~~w~~~v~-~~~~~~lIlEDDv~~~~~  101 (200)
T PF01755_consen   68 IGCALSHIKAWQRIVD-SGLEYALILEDDVIFDPD  101 (200)
T ss_pred             EeehhhHHHHHHHHHH-cCCCeEEEEecccccccc
Confidence            1224555666666665 467899999999999865

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=95.07  E-value=0.59  Score=38.56  Aligned_cols=162  Identities=11%  Similarity=-0.001  Sum_probs=70.7

Q ss_pred             eEEEEEEcCCCCHHHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcE--EEEeccccc
Q 026972           46 FFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDF--LRLNHIEGY  123 (230)
Q Consensus        46 ~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDi--l~~d~~D~y  123 (230)
                      .+.|+|++.-....-+..|+.--...         ...++++++...+.   ....+.+.+-...++..  ..+...   
T Consensus         2 ~v~Vvip~~~~~~~l~~~l~sl~~~~---------~~~~~v~vvd~~~~---~~~~~~~~~~~~~~~~~~v~vi~~~---   66 (228)
T PF13641_consen    2 RVSVVIPAYNEDDVLRRCLESLLAQD---------YPRLEVVVVDDGSD---DETAEILRALAARYPRVRVRVIRRP---   66 (228)
T ss_dssp             -EEEE--BSS-HHHHHHHHHHHTTSH---------HHTEEEEEEEE-SS---S-GCTTHHHHHHTTGG-GEEEEE-----
T ss_pred             EEEEEEEecCCHHHHHHHHHHHHcCC---------CCCeEEEEEECCCC---hHHHHHHHHHHHHcCCCceEEeecC---
Confidence            46677776554344444444443211         12356666664443   33445565555666653  333322   


Q ss_pred             Ccc--hHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhcc-CCCCceEEEEeecCc---cc----cCCCCcccc
Q 026972          124 HEL--SSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARH-RSKPRVYIGCMKSGP---VL----GQKGVKYHE  193 (230)
Q Consensus       124 ~nl--t~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~-~~~~~~y~G~~~~~~---v~----r~~~~K~~v  193 (230)
                      .|.  ..|.- +++++.+..+.+|++.+|||+.+.++-|...+... .+.-....|.....+   ..    +.....|+.
T Consensus        67 ~~~g~~~k~~-a~n~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (228)
T PF13641_consen   67 RNPGPGGKAR-ALNEALAAARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDRNWLTRLQDLFFARWHL  145 (228)
T ss_dssp             --HHHHHHHH-HHHHHHHH---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCCCEEEE-TT--S-EETT
T ss_pred             CCCCcchHHH-HHHHHHHhcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCCCHHHHHHHHHHhhhhh
Confidence            222  23433 45666665679999999999999988887777665 233334434332111   00    000011111


Q ss_pred             ccccccCCCCCCCCcCcccceeeeCHHHHHHHH
Q 026972          194 PEYWKFGEEGNKYFRHATGQIYAISKDLATYIS  226 (230)
Q Consensus       194 ~~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~  226 (230)
                      ... ....... . .++.|++.++.+++++.+.
T Consensus       146 ~~~-~~~~~~~-~-~~~~G~~~~~rr~~~~~~g  175 (228)
T PF13641_consen  146 RFR-SGRRALG-V-AFLSGSGMLFRRSALEEVG  175 (228)
T ss_dssp             TS--TT-B------S-B--TEEEEEHHHHHHH-
T ss_pred             hhh-hhhcccc-e-eeccCcEEEEEHHHHHHhC
Confidence            100 0000111 1 3468999999999999873

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.47  E-value=0.69  Score=37.82  Aligned_cols=136  Identities=14%  Similarity=-0.009  Sum_probs=69.4

Q ss_pred             eEEEEEeecCCCCCchhhhhHHHHHhhC--CcEEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHH
Q 026972           84 IIMRFVIGHSATAGGVLDRAIDAEDEQH--KDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVG  161 (230)
Q Consensus        84 v~~~FvvG~~~~~~~~~~~~l~~E~~~~--gDil~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~  161 (230)
                      +.++.|-+.+.   +...+.+. +...+  ..+..+...... |. -|. .+++++.+....+|++.+|+|..+.++.|.
T Consensus        29 ~eiivvdd~s~---d~t~~~~~-~~~~~~~~~v~~~~~~~~~-~~-g~~-~a~n~g~~~~~~d~i~~~D~D~~~~~~~l~  101 (229)
T cd04192          29 FEVILVDDHST---DGTVQILE-FAAAKPNFQLKILNNSRVS-IS-GKK-NALTTAIKAAKGDWIVTTDADCVVPSNWLL  101 (229)
T ss_pred             eEEEEEcCCCC---cChHHHHH-HHHhCCCcceEEeeccCcc-cc-hhH-HHHHHHHHHhcCCEEEEECCCcccCHHHHH
Confidence            56666655443   22233343 23233  345555554322 22 222 345666666789999999999999988777


Q ss_pred             HHHhccCC-CCceEEEEeecCcc----ccCCCCccccccccccCCCCCCCCcCcccceeeeCHHHHHHHH
Q 026972          162 STLARHRS-KPRVYIGCMKSGPV----LGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS  226 (230)
Q Consensus       162 ~~L~~~~~-~~~~y~G~~~~~~v----~r~~~~K~~v~~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~  226 (230)
                      ..+..... ....+.|.....+.    .+...-.+...............+..+.|+++++++++.+.+.
T Consensus       102 ~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~g  171 (229)
T cd04192         102 TFVAFIQKEQIGLVAGPVIYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFEVG  171 (229)
T ss_pred             HHHHHhhcCCCcEEeeeeeecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHHhc
Confidence            77764432 23344454321100    0000000000000000001224556678999999999998873

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=92.41  E-value=3  Score=31.56  Aligned_cols=95  Identities=9%  Similarity=0.091  Sum_probs=51.4

Q ss_pred             HHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhccCCCC--ceEEEEeec---C-ccccC-CCCccccccccccC-CCC
Q 026972          132 IYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKP--RVYIGCMKS---G-PVLGQ-KGVKYHEPEYWKFG-EEG  203 (230)
Q Consensus       132 ~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~~~--~~y~G~~~~---~-~v~r~-~~~K~~v~~~~~~~-y~~  203 (230)
                      .+++++.+..+.+|++.+|+|..+....|...+......+  .+..|....   . ..... ...++......... ...
T Consensus        68 ~~~n~~~~~~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (180)
T cd06423          68 GALNAGLRHAKGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSA  147 (180)
T ss_pred             HHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccchheecceeeeeeehhhe
Confidence            4555666656899999999999998877777644443222  233333221   1 11110 00111111000000 001


Q ss_pred             CCCCcCcccceeeeCHHHHHHHH
Q 026972          204 NKYFRHATGQIYAISKDLATYIS  226 (230)
Q Consensus       204 ~~yPpy~~G~~YimS~dl~~~i~  226 (230)
                      ....+++.|.++++++++++.+.
T Consensus       148 ~~~~~~~~g~~~~~~~~~~~~~g  170 (180)
T cd06423         148 LGGVLVLSGAFGAFRREALREVG  170 (180)
T ss_pred             ecceeecCchHHHHHHHHHHHhC
Confidence            23446689999999999998875

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=91.47  E-value=2.5  Score=33.48  Aligned_cols=134  Identities=12%  Similarity=0.056  Sum_probs=72.4

Q ss_pred             ceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHH
Q 026972           83 GIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGS  162 (230)
Q Consensus        83 ~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~  162 (230)
                      .+.++.|-+.+.  + ...+.+.....++..+..+.....+ .   | -.+++.+..+...+|++.+|+|....+..|..
T Consensus        29 ~~eiivvdd~s~--d-~t~~~~~~~~~~~~~i~~i~~~~n~-G---~-~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~  100 (181)
T cd04187          29 DYEIIFVDDGST--D-RTLEILRELAARDPRVKVIRLSRNF-G---Q-QAALLAGLDHARGDAVITMDADLQDPPELIPE  100 (181)
T ss_pred             CeEEEEEeCCCC--c-cHHHHHHHHHhhCCCEEEEEecCCC-C---c-HHHHHHHHHhcCCCEEEEEeCCCCCCHHHHHH
Confidence            456666655554  2 2333444445556666666554332 1   2 23444444445679999999999998877777


Q ss_pred             HHhccCCCCceEEEEeecC--ccccCCCCccccc-cccccCCCCCCCCcCcccceeeeCHHHHHHHHhc
Q 026972          163 TLARHRSKPRVYIGCMKSG--PVLGQKGVKYHEP-EYWKFGEEGNKYFRHATGQIYAISKDLATYISAH  228 (230)
Q Consensus       163 ~L~~~~~~~~~y~G~~~~~--~v~r~~~~K~~v~-~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~~n  228 (230)
                      .+........+.+|.....  ...+.-.++.+.. ....    ....-+...|+++++++.+++.+..-
T Consensus       101 l~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~r~~~~~i~~~  165 (181)
T cd04187         101 MLAKWEEGYDVVYGVRKNRKESWLKRLTSKLFYRLINKL----SGVDIPDNGGDFRLMDRKVVDALLLL  165 (181)
T ss_pred             HHHHHhCCCcEEEEEecCCcchHHHHHHHHHHHHHHHHH----cCCCCCCCCCCEEEEcHHHHHHHHhc
Confidence            7765444445666654211  1000000111110 0000    12333457788999999999988643

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=91.00  E-value=7.3  Score=31.51  Aligned_cols=79  Identities=13%  Similarity=0.039  Sum_probs=45.8

Q ss_pred             eEEEEEeecCCCCCchhhhhHHHHHhhCC--cEEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHH
Q 026972           84 IIMRFVIGHSATAGGVLDRAIDAEDEQHK--DFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVG  161 (230)
Q Consensus        84 v~~~FvvG~~~~~~~~~~~~l~~E~~~~g--Dil~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~  161 (230)
                      +.+++|...+.   ....+.+++-.+.+.  ++......... ....|.- .+..+.+....+|++..|+|+.+.++.|.
T Consensus        31 ~eiivVdd~s~---d~t~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~-~~n~g~~~a~~d~i~~~D~D~~~~~~~l~  105 (196)
T cd02520          31 YEILFCVQDED---DPAIPVVRKLIAKYPNVDARLLIGGEKV-GINPKVN-NLIKGYEEARYDILVISDSDISVPPDYLR  105 (196)
T ss_pred             eEEEEEeCCCc---chHHHHHHHHHHHCCCCcEEEEecCCcC-CCCHhHH-HHHHHHHhCCCCEEEEECCCceEChhHHH
Confidence            67777776664   223344555555665  33222221111 1223432 34444555678999999999999887777


Q ss_pred             HHHhcc
Q 026972          162 STLARH  167 (230)
Q Consensus       162 ~~L~~~  167 (230)
                      ..+...
T Consensus       106 ~l~~~~  111 (196)
T cd02520         106 RMVAPL  111 (196)
T ss_pred             HHHHHh
Confidence            776653

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis

Probab=90.17  E-value=3.7  Score=31.53  Aligned_cols=92  Identities=12%  Similarity=0.135  Sum_probs=50.6

Q ss_pred             EEEEcCCCCHHHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHh-----hCCcEEEEeccccc
Q 026972           49 MGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDE-----QHKDFLRLNHIEGY  123 (230)
Q Consensus        49 i~V~S~~~~~~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~-----~~gDil~~d~~D~y  123 (230)
                      +.|.|=+...+||..+++.....           ++.+-|+-|-....  .....+.....     .++-    +..-+.
T Consensus         2 i~vInL~~~~~Rr~~~~~~~~~~-----------~~~~~~~~Avd~~~--~~~~~~~~~~~~~~~~~~~~----~l~~gE   64 (128)
T cd06532           2 IFVINLDRSTDRRERMEAQLAAL-----------GLDFEFFDAVDGKD--LSEEELAALYDALFLPRYGR----PLTPGE   64 (128)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHc-----------CCCeEEEecccccc--CCHHHHHHHhHHHhhhhcCC----CCChhh
Confidence            45677788899999999865543           33455666666521  11111211111     1111    111122


Q ss_pred             CcchHHHHHHHHHHHhcCCceEEEEecCceeEeHH
Q 026972          124 HELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLG  158 (230)
Q Consensus       124 ~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~  158 (230)
                      -.-.+-.+..|+-+.+ .+.++.+-..||+.+..+
T Consensus        65 iGC~lSH~~~w~~~~~-~~~~~alIlEDDv~~~~~   98 (128)
T cd06532          65 IGCFLSHYKLWQKIVE-SNLEYALILEDDAILDPD   98 (128)
T ss_pred             HHHHHHHHHHHHHHHH-cCCCeEEEEccCcEECCC
Confidence            2223445555555554 466889999999998887

The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.

>PRK11204 N-glycosyltransferase; Provisional

Probab=89.98  E-value=11  Score=34.47  Aligned_cols=109  Identities=11%  Similarity=0.058  Sum_probs=62.8

Q ss_pred             CCceeEEEEEEcCCCCHHHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEeccc
Q 026972           42 RRKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE  121 (230)
Q Consensus        42 ~~~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D  121 (230)
                      .+.+.+-|+|++.-+.    ..|+++-.+...    . ......++ |+....  ++...+.+++..+++..+..++..+
T Consensus        51 ~~~p~vsViIp~yne~----~~i~~~l~sl~~----q-~yp~~eii-VvdD~s--~d~t~~~l~~~~~~~~~v~~i~~~~  118 (420)
T PRK11204         51 KEYPGVSILVPCYNEG----ENVEETISHLLA----L-RYPNYEVI-AINDGS--SDNTGEILDRLAAQIPRLRVIHLAE  118 (420)
T ss_pred             CCCCCEEEEEecCCCH----HHHHHHHHHHHh----C-CCCCeEEE-EEECCC--CccHHHHHHHHHHhCCcEEEEEcCC
Confidence            3445677777776543    334444433211    0 01134444 443333  2334455555566676676665433


Q ss_pred             ccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhcc
Q 026972          122 GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARH  167 (230)
Q Consensus       122 ~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~  167 (230)
                         |.. | -.+++.+.+..+.+|++..|+|+.+.++.|.+.+...
T Consensus       119 ---n~G-k-a~aln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~  159 (420)
T PRK11204        119 ---NQG-K-ANALNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHF  159 (420)
T ss_pred             ---CCC-H-HHHHHHHHHHcCCCEEEEECCCCCCChhHHHHHHHHH
Confidence               222 3 3455666666789999999999999999888777665

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=88.86  E-value=1  Score=36.80  Aligned_cols=94  Identities=15%  Similarity=0.045  Sum_probs=54.7

Q ss_pred             hHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhccCC-CCceEEEEeecCccccCCCCc---ccc---cccccc
Q 026972          127 SSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRS-KPRVYIGCMKSGPVLGQKGVK---YHE---PEYWKF  199 (230)
Q Consensus       127 t~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~-~~~~y~G~~~~~~v~r~~~~K---~~v---~~~~~~  199 (230)
                      ..|+-...+......+.++++..|+|+.++++-|...+..... .-.+..|... ..+.+.-.+.   -++   +..+  
T Consensus        16 N~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~-~~~~~~~~~~l~~~~~~~~~~~~--   92 (175)
T PF13506_consen   16 NPKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPR-GVPARGFWSRLEAAFFNFLPGVL--   92 (175)
T ss_pred             ChHHHHHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEeccc-ccCCcCHHHHHHHHHHhHHHHHH--
Confidence            4466655555443368999999999999999988887766542 2233322111 1111110000   011   1110  


Q ss_pred             CCCCCCCCcCcccceeeeCHHHHHHH
Q 026972          200 GEEGNKYFRHATGQIYAISKDLATYI  225 (230)
Q Consensus       200 ~y~~~~yPpy~~G~~YimS~dl~~~i  225 (230)
                        ..-.-.++|.|++++|.+++++.+
T Consensus        93 --~a~~~~~~~~G~~m~~rr~~L~~~  116 (175)
T PF13506_consen   93 --QALGGAPFAWGGSMAFRREALEEI  116 (175)
T ss_pred             --HHhcCCCceecceeeeEHHHHHHc
Confidence              001246789999999999999876

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

Probab=88.72  E-value=4.4  Score=31.90  Aligned_cols=132  Identities=9%  Similarity=0.010  Sum_probs=70.5

Q ss_pred             eEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHH
Q 026972           84 IIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGST  163 (230)
Q Consensus        84 v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~  163 (230)
                      +.++.+-..+.   ....+.+..-..++..+..+.......     .-.++..+.++...+|++..|+|..+.++.|.+.
T Consensus        29 ~eiivvd~~s~---d~~~~~~~~~~~~~~~~~~~~~~~n~G-----~~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l  100 (185)
T cd04179          29 YEIIVVDDGST---DGTAEIARELAARVPRVRVIRLSRNFG-----KGAAVRAGFKAARGDIVVTMDADLQHPPEDIPKL  100 (185)
T ss_pred             EEEEEEcCCCC---CChHHHHHHHHHhCCCeEEEEccCCCC-----ccHHHHHHHHHhcCCEEEEEeCCCCCCHHHHHHH
Confidence            44444444443   234455555566666665555544432     1234444445445599999999999998888888


Q ss_pred             Hhc-cCCCCceEEEEee--cC----ccccCCCCccccccccccCCCCCCCCcCcccceeeeCHHHHHHHH
Q 026972          164 LAR-HRSKPRVYIGCMK--SG----PVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS  226 (230)
Q Consensus       164 L~~-~~~~~~~y~G~~~--~~----~v~r~~~~K~~v~~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~  226 (230)
                      +.. ......+..|...  .+    +..+. ...+........  -...-.....|+++++++++++.+.
T Consensus       101 ~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~r~~~~~i~  167 (185)
T cd04179         101 LEKLLEGGADVVIGSRFVRGGGAGMPLLRR-LGSRLFNFLIRL--LLGVRISDTQSGFRLFRREVLEALL  167 (185)
T ss_pred             HHHHhccCCcEEEEEeecCCCcccchHHHH-HHHHHHHHHHHH--HcCCCCcCCCCceeeeHHHHHHHHH
Confidence            876 3334456666532  11    11110 000111100000  0012223367888899999999883

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=88.24  E-value=9.6  Score=28.96  Aligned_cols=29  Identities=17%  Similarity=0.231  Sum_probs=23.9

Q ss_pred             hcCCceEEEEecCceeEeHHHHHHHHhcc
Q 026972          139 AKWDADFYIKVDDDVHVNLGMVGSTLARH  167 (230)
Q Consensus       139 ~~~~~~fvlK~DDD~fvn~~~L~~~L~~~  167 (230)
                      ++.+.+|++..|||.++.++.+...+...
T Consensus        71 ~~~~~~~i~~~D~D~~~~~~~l~~~~~~~   99 (166)
T cd04186          71 REAKGDYVLLLNPDTVVEPGALLELLDAA   99 (166)
T ss_pred             hhCCCCEEEEECCCcEECccHHHHHHHHH
Confidence            33489999999999999988888877643

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=87.80  E-value=13  Score=33.87  Aligned_cols=114  Identities=12%  Similarity=-0.014  Sum_probs=58.5

Q ss_pred             CceeEEEEEEcCCCCHHHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCC---cEEEEec
Q 026972           43 RKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHK---DFLRLNH  119 (230)
Q Consensus        43 ~~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~g---Dil~~d~  119 (230)
                      ..+.+-|+|++.-+...-...|+.-- ++..       ...+.+++|-..+.  | .+.+.+.+-.+.+.   .+.++..
T Consensus        38 ~~p~VSVIIpa~Ne~~~L~~~L~sL~-~q~y-------p~~~eIIVVDd~St--D-~T~~i~~~~~~~~~~~~~i~vi~~  106 (384)
T TIGR03469        38 AWPAVVAVVPARNEADVIGECVTSLL-EQDY-------PGKLHVILVDDHST--D-GTADIARAAARAYGRGDRLTVVSG  106 (384)
T ss_pred             CCCCEEEEEecCCcHhHHHHHHHHHH-hCCC-------CCceEEEEEeCCCC--C-cHHHHHHHHHHhcCCCCcEEEecC
Confidence            44567777776654332333333221 1110       11356676665554  2 22223332233343   4554443


Q ss_pred             ccccCcchHHHH---HHHHHHHh-cCCceEEEEecCceeEeHHHHHHHHhcc
Q 026972          120 IEGYHELSSKTQ---IYFSTAVA-KWDADFYIKVDDDVHVNLGMVGSTLARH  167 (230)
Q Consensus       120 ~D~y~nlt~Ktl---~~l~w~~~-~~~~~fvlK~DDD~fvn~~~L~~~L~~~  167 (230)
                      .+.-.+-.-|..   .+++.+.+ ..+.+|++.+|+|+.+.++.|.+.+...
T Consensus       107 ~~~~~g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~  158 (384)
T TIGR03469       107 QPLPPGWSGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARA  158 (384)
T ss_pred             CCCCCCCcchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHH
Confidence            222122234533   34555443 2348999999999999998887777654

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=87.64  E-value=23  Score=33.06  Aligned_cols=164  Identities=13%  Similarity=0.152  Sum_probs=85.5

Q ss_pred             ceeEEEEEEcCCCCHHHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEeccccc
Q 026972           44 KVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGY  123 (230)
Q Consensus        44 ~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~y  123 (230)
                      .+.+-|+|++.-+...-++.|+. -.++.        ...+.+++|-..+.   +...+.+.+..+++..+.+.....  
T Consensus        74 ~p~vsViIP~yNE~~~i~~~l~s-ll~q~--------yp~~eIivVdDgs~---D~t~~~~~~~~~~~~~v~vv~~~~--  139 (444)
T PRK14583         74 HPLVSILVPCFNEGLNARETIHA-ALAQT--------YTNIEVIAINDGSS---DDTAQVLDALLAEDPRLRVIHLAH--  139 (444)
T ss_pred             CCcEEEEEEeCCCHHHHHHHHHH-HHcCC--------CCCeEEEEEECCCC---ccHHHHHHHHHHhCCCEEEEEeCC--
Confidence            45677777777554333333332 12221        12356555544332   334455555566676665554332  


Q ss_pred             CcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhccCCCCceEEEEeecCccccCCCC---ccccccccc-c
Q 026972          124 HELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGV---KYHEPEYWK-F  199 (230)
Q Consensus       124 ~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~~~~~y~G~~~~~~v~r~~~~---K~~v~~~~~-~  199 (230)
                       |. -|. .+++.+....+.+|++..|.|+.+..+.+.+.+......++  .|.+.+.+..+++.+   +....+... +
T Consensus       140 -n~-Gka-~AlN~gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~--~g~v~g~~~~~~~~~~~~~~~~~e~~~~~  214 (444)
T PRK14583        140 -NQ-GKA-IALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPR--TGAVTGNPRIRTRSTLIGRVQVGEFSSII  214 (444)
T ss_pred             -CC-CHH-HHHHHHHHhCCCCEEEEECCCCCcCHHHHHHHHHHHHhCCC--eEEEEccceecCCCcchhhHHHHHHHHHH
Confidence             21 143 45666666678999999999999999988877765432233  244433332222211   111111000 0


Q ss_pred             C----CCCCCCCc-CcccceeeeCHHHHHHHH
Q 026972          200 G----EEGNKYFR-HATGQIYAISKDLATYIS  226 (230)
Q Consensus       200 ~----y~~~~yPp-y~~G~~YimS~dl~~~i~  226 (230)
                      +    .....-+. .++|.+.++.+++++++.
T Consensus       215 ~~~~~~~~~~g~~~~~sG~~~~~rr~al~~vG  246 (444)
T PRK14583        215 GLIKRTQRVYGQVFTVSGVVAAFRRRALADVG  246 (444)
T ss_pred             HHHHHHHHHhCCceEecCceeEEEHHHHHHcC
Confidence            0    00001112 357888999999988763

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=86.28  E-value=15  Score=29.30  Aligned_cols=135  Identities=13%  Similarity=0.079  Sum_probs=67.3

Q ss_pred             ceEEEEEeecCCCCCchhhhhHHHHHhhCC-cEEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHH
Q 026972           83 GIIMRFVIGHSATAGGVLDRAIDAEDEQHK-DFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVG  161 (230)
Q Consensus        83 ~v~~~FvvG~~~~~~~~~~~~l~~E~~~~g-Dil~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~  161 (230)
                      .+.+++|-..+.  | .+.+.+++-..+++ .+.......+. +.    ...+..+....+.+|++..|+|..+.++.|.
T Consensus        27 ~~eiiVvddgS~--d-~t~~~~~~~~~~~~~~~~~~~~~~~~-G~----~~~~n~g~~~~~g~~v~~ld~Dd~~~~~~l~   98 (214)
T cd04196          27 NDELIISDDGST--D-GTVEIIKEYIDKDPFIIILIRNGKNL-GV----ARNFESLLQAADGDYVFFCDQDDIWLPDKLE   98 (214)
T ss_pred             CeEEEEEeCCCC--C-CcHHHHHHHHhcCCceEEEEeCCCCc-cH----HHHHHHHHHhCCCCEEEEECCCcccChhHHH
Confidence            466666665554  2 23344444444454 33333333322 22    2233333455689999999999999988888


Q ss_pred             HHHhc-cC-CCCceEEEEee----cCccccCCCCcccccc-ccccCCCCCCCCcCcccceeeeCHHHHHHHHh
Q 026972          162 STLAR-HR-SKPRVYIGCMK----SGPVLGQKGVKYHEPE-YWKFGEEGNKYFRHATGQIYAISKDLATYISA  227 (230)
Q Consensus       162 ~~L~~-~~-~~~~~y~G~~~----~~~v~r~~~~K~~v~~-~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~~  227 (230)
                      ..+.. .. +...++.|...    .+.......-...... ...  +.......++.|++.++.+++++.+..
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~r~~~~~~~~~  169 (214)
T cd04196          99 RLLKAFLKDDKPLLVYSDLELVDENGNPIGESFFEYQKIKPGTS--FNNLLFQNVVTGCTMAFNRELLELALP  169 (214)
T ss_pred             HHHHHHhcCCCceEEecCcEEECCCCCCcccccccccccCCccC--HHHHHHhCccCCceeeEEHHHHHhhcc
Confidence            87765 22 22233333221    1111110000000000 000  000122345679999999999988754

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=85.85  E-value=18  Score=29.67  Aligned_cols=77  Identities=10%  Similarity=0.034  Sum_probs=46.0

Q ss_pred             CceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHH
Q 026972           82 KGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVG  161 (230)
Q Consensus        82 ~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~  161 (230)
                      ..+.++.+-+.+.   +...+.+....+++..+........  +.    -.+++.+.+..+.+|++..|+|..+.+.-|.
T Consensus        30 ~~~evivvd~~s~---d~~~~~~~~~~~~~~~v~~i~~~~~--~~----~~a~N~g~~~a~~d~v~~lD~D~~~~~~~l~  100 (249)
T cd02525          30 DLIEIIVVDGGST---DGTREIVQEYAAKDPRIRLIDNPKR--IQ----SAGLNIGIRNSRGDIIIRVDAHAVYPKDYIL  100 (249)
T ss_pred             CccEEEEEeCCCC---ccHHHHHHHHHhcCCeEEEEeCCCC--Cc----hHHHHHHHHHhCCCEEEEECCCccCCHHHHH
Confidence            3556666655554   2333444444444444444432211  11    1356666665689999999999999888777


Q ss_pred             HHHhcc
Q 026972          162 STLARH  167 (230)
Q Consensus       162 ~~L~~~  167 (230)
                      ..+...
T Consensus       101 ~~~~~~  106 (249)
T cd02525         101 ELVEAL  106 (249)
T ss_pred             HHHHHH
Confidence            777554

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=85.83  E-value=3  Score=32.92  Aligned_cols=90  Identities=13%  Similarity=-0.014  Sum_probs=51.8

Q ss_pred             HHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhccC--CCCceEEEEee--cCccccCCCCccccccccccCCCCCCCC
Q 026972          132 IYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHR--SKPRVYIGCMK--SGPVLGQKGVKYHEPEYWKFGEEGNKYF  207 (230)
Q Consensus       132 ~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~~--~~~~~y~G~~~--~~~v~r~~~~K~~v~~~~~~~y~~~~yP  207 (230)
                      .+++.+.+..+.+|++..|+|..+..+.+...+....  +...+..|...  ...... ...+......    ...-...
T Consensus        65 ~a~n~~~~~a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~  139 (202)
T cd06433          65 DAMNKGIALATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRV-IGRRRPPPFL----DKFLLYG  139 (202)
T ss_pred             HHHHHHHHHcCCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCc-ccCCCCcchh----hhHHhhc
Confidence            4455566666889999999999999998888773332  23345555432  111100 0011000100    0111334


Q ss_pred             cCcccceeeeCHHHHHHHH
Q 026972          208 RHATGQIYAISKDLATYIS  226 (230)
Q Consensus       208 py~~G~~YimS~dl~~~i~  226 (230)
                      .++.|++.++++++.+.+.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~  158 (202)
T cd06433         140 MPICHQATFFRRSLFEKYG  158 (202)
T ss_pred             CcccCcceEEEHHHHHHhC
Confidence            4577888899999998874

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=85.80  E-value=18  Score=32.90  Aligned_cols=168  Identities=8%  Similarity=0.037  Sum_probs=91.0

Q ss_pred             ceeEEEEEEcCCCCHH-HHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEecccc
Q 026972           44 KVFFVMGIITAFSSRK-RRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEG  122 (230)
Q Consensus        44 ~~~lli~V~S~~~~~~-rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~  122 (230)
                      .+.+-|+|++--+..+ ..+.++..-...         -....++.|...+.   +...+.+.+-..+++..+.+...  
T Consensus        53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~d---------yp~~evivv~d~~~---d~~~~~~~~~~~~~~~~~~~~~~--  118 (439)
T COG1215          53 LPKVSVIIPAYNEEPEVLEETLESLLSQD---------YPRYEVIVVDDGST---DETYEILEELGAEYGPNFRVIYP--  118 (439)
T ss_pred             CCceEEEEecCCCchhhHHHHHHHHHhCC---------CCCceEEEECCCCC---hhHHHHHHHHHhhcCcceEEEec--
Confidence            4677777887765552 333333332221         12245666665443   44455666666666533333321  


Q ss_pred             cCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhccCCCCce-EEEEee--cC-----ccccCCCCccccc
Q 026972          123 YHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRV-YIGCMK--SG-----PVLGQKGVKYHEP  194 (230)
Q Consensus       123 y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~~~~~-y~G~~~--~~-----~v~r~~~~K~~v~  194 (230)
                       ..-...-..++.++....+.++++..|-|+.+..+.|.+.+......+.. ..|...  .+     ...|-..-.+...
T Consensus       119 -~~~~~gK~~al~~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~~f~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~  197 (439)
T COG1215         119 -EKKNGGKAGALNNGLKRAKGDVVVILDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSA  197 (439)
T ss_pred             -cccCccchHHHHHHHhhcCCCEEEEEcCCCCCChhHHHHHHhhhcCCCeeEEeCCceeeecCChhhhcchhcchhhhhh
Confidence             11122335677777776679999999999999999999988777533332 222211  00     0000000000000


Q ss_pred             cccccCCC-CCCCCcCcccceeeeCHHHHHHHH
Q 026972          195 EYWKFGEE-GNKYFRHATGQIYAISKDLATYIS  226 (230)
Q Consensus       195 ~~~~~~y~-~~~yPpy~~G~~YimS~dl~~~i~  226 (230)
                      ........ ....+.+|.|++.++.+++++.+.
T Consensus       198 ~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~~g  230 (439)
T COG1215         198 FYFRLRAASKGGLISFLSGSSSAFRRSALEEVG  230 (439)
T ss_pred             HHHhhhhhhhcCCeEEEcceeeeEEHHHHHHhC
Confidence            00000001 123577899999999999998875

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional

Probab=85.25  E-value=25  Score=31.45  Aligned_cols=134  Identities=8%  Similarity=0.018  Sum_probs=69.0

Q ss_pred             ceEEEEEeecCCCCCchhhhhHHHHHhhCCc-EEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHH
Q 026972           83 GIIMRFVIGHSATAGGVLDRAIDAEDEQHKD-FLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVG  161 (230)
Q Consensus        83 ~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gD-il~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~  161 (230)
                      .+.+++|-..+.+   ...+.+++-.+.+++ ++......++ ...    .+++-..++.+.+|++.+|.|...++..+.
T Consensus        38 ~~EIIvVDDgS~D---~T~~il~~~~~~~~~~v~~i~~~~n~-G~~----~A~~~G~~~A~gd~vv~~DaD~q~~p~~i~  109 (325)
T PRK10714         38 EYEILLIDDGSSD---NSAEMLVEAAQAPDSHIVAILLNRNY-GQH----SAIMAGFSHVTGDLIITLDADLQNPPEEIP  109 (325)
T ss_pred             CEEEEEEeCCCCC---cHHHHHHHHHhhcCCcEEEEEeCCCC-CHH----HHHHHHHHhCCCCEEEEECCCCCCCHHHHH
Confidence            4677787766652   223334333344454 4444333333 211    123333344578999999999999999888


Q ss_pred             HHHhccCCCCceEEEEeec--CccccCCCCccccccccccCCCCCCCCcCcccceeeeCHHHHHHHHh
Q 026972          162 STLARHRSKPRVYIGCMKS--GPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISA  227 (230)
Q Consensus       162 ~~L~~~~~~~~~y~G~~~~--~~v~r~~~~K~~v~~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~~  227 (230)
                      ++++......++..|....  .+..|.-.++.+----..+  .+..++.+++| .-++++++++.|..
T Consensus       110 ~l~~~~~~~~DvV~~~r~~~~~~~~r~~~s~~~~~l~~~~--~g~~~~d~~~g-fr~~~r~~~~~l~~  174 (325)
T PRK10714        110 RLVAKADEGYDVVGTVRQNRQDSWFRKTASKMINRLIQRT--TGKAMGDYGCM-LRAYRRHIVDAMLH  174 (325)
T ss_pred             HHHHHHHhhCCEEEEEEcCCCCcHHHHHHHHHHHHHHHHH--cCCCCCCCCcC-eEEEcHHHHHHHHH
Confidence            8887654323444443321  2222222222111100000  12234444333 45899999998853

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=84.11  E-value=23  Score=29.42  Aligned_cols=112  Identities=8%  Similarity=-0.038  Sum_probs=58.9

Q ss_pred             ccCCceeEEEEEEcCCCCHHHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEec
Q 026972           40 KARRKVFFVMGIITAFSSRKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNH  119 (230)
Q Consensus        40 ~~~~~~~lli~V~S~~~~~~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~  119 (230)
                      .+...+.+-|+|++.-....-...|+.-..+..       ....+.++++...+.   +...+.+.+..+.  .+.+...
T Consensus        24 ~~~~~~~isVvip~~n~~~~l~~~l~si~~q~~-------~~~~~eiivvdd~s~---d~t~~~~~~~~~~--~v~~i~~   91 (251)
T cd06439          24 DPAYLPTVTIIIPAYNEEAVIEAKLENLLALDY-------PRDRLEIIVVSDGST---DGTAEIAREYADK--GVKLLRF   91 (251)
T ss_pred             CCCCCCEEEEEEecCCcHHHHHHHHHHHHhCcC-------CCCcEEEEEEECCCC---ccHHHHHHHHhhC--cEEEEEc
Confidence            344555677777776544334445555444321       112355555554433   2233333322222  3444433


Q ss_pred             ccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhccC
Q 026972          120 IEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHR  168 (230)
Q Consensus       120 ~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~~  168 (230)
                      .+..    -|. .+++.+.+....+|++.+|+|+.+..+-|.+.+....
T Consensus        92 ~~~~----g~~-~a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~  135 (251)
T cd06439          92 PERR----GKA-AALNRALALATGEIVVFTDANALLDPDALRLLVRHFA  135 (251)
T ss_pred             CCCC----ChH-HHHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHHhc
Confidence            2221    132 3445445555679999999999999777777766653

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=82.78  E-value=25  Score=28.88  Aligned_cols=37  Identities=16%  Similarity=0.143  Sum_probs=28.9

Q ss_pred             HHHHHHHhc--CCceEEEEecCceeEeHHHHHHHHhccC
Q 026972          132 IYFSTAVAK--WDADFYIKVDDDVHVNLGMVGSTLARHR  168 (230)
Q Consensus       132 ~~l~w~~~~--~~~~fvlK~DDD~fvn~~~L~~~L~~~~  168 (230)
                      .++.++.+.  .+.+|++..|+|+.+.++.|...+....
T Consensus        72 ~a~n~g~~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~  110 (236)
T cd06435          72 GALNYALERTAPDAEIIAVIDADYQVEPDWLKRLVPIFD  110 (236)
T ss_pred             HHHHHHHHhcCCCCCEEEEEcCCCCcCHHHHHHHHHHhc
Confidence            356666663  3589999999999999998888876653

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=80.78  E-value=26  Score=27.79  Aligned_cols=36  Identities=11%  Similarity=0.049  Sum_probs=28.2

Q ss_pred             HHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhcc
Q 026972          132 IYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARH  167 (230)
Q Consensus       132 ~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~  167 (230)
                      .+++++.++...+|++..|+|..+.++.|...+...
T Consensus        73 ~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~~~~~~  108 (202)
T cd04184          73 AATNSALELATGEFVALLDHDDELAPHALYEVVKAL  108 (202)
T ss_pred             HHHHHHHHhhcCCEEEEECCCCcCChHHHHHHHHHH
Confidence            345555555678999999999999998888877665

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	230
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	3e-04

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 28/187 (14%), Positives = 59/187 (31%), Gaps = 27/187 (14%)

Query: 43  RKVFFVMGIITAFSS-RKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLD 101
             +F    + T ++  R R D + +TW+ +               +  I   +      D
Sbjct: 13  GDIFI--AVKTTWAFHRSRLDLLLDTWVSRIR------------QQTFIFTDSP-----D 53

Query: 102 RAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVG 161
             +      H    + +    +  LS K    F   +      ++  VDDD +VN   + 
Sbjct: 54  ERLQERLGPHLVVTQCSAEHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALL 112

Query: 162 STLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDL 221
             L        VY+G       +    ++  +           +++    G  + I++ L
Sbjct: 113 QLLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKL------VRFWFATGGAGFCINRQL 166

Query: 222 ATYISAH 228
           A  +   
Sbjct: 167 ALKMVPW 173

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	230
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.85
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	93.87
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	93.12
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	91.57
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	89.76
3bcv_A	240	Putative glycosyltransferase protein; protein stru	86.78
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	81.73

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=99.85  E-value=5.1e-21  Score=167.24  Aligned_cols=158  Identities=17%  Similarity=0.208  Sum_probs=104.7

Q ss_pred             CceeEEEEEEcCCCC-HHHHHHHHHhhccCCcCcccccCCCceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEeccc
Q 026972           43 RKVFFVMGIITAFSS-RKRRDSIRETWMPKGDGLLKLENEKGIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIE  121 (230)
Q Consensus        43 ~~~~lli~V~S~~~~-~~rR~~IR~TW~~~~~~~~~~~~~~~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D  121 (230)
                      ..-.|+|+|+|++++ .+|+.+||+||++...        ..   +||++..+  +..    +...  ..+++++.++.+
T Consensus        11 ~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~--------~~---~fifsd~~--d~~----l~~~--~~~~~~~~~~~~   71 (280)
T 2j0a_A           11 QLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIR--------QQ---TFIFTDSP--DER----LQER--LGPHLVVTQCSA   71 (280)
T ss_dssp             CGGGEEEEEECCGGGTTTTHHHHHHTGGGGSG--------GG---EEEEESSC--CHH----HHHH--HGGGEEECCC--
T ss_pred             CcccEEEEEECcHHHHHHHHHHHHHHHhccCC--------Cc---eEEEcCCC--ccc----cccc--ccccceeccccc
Confidence            345688999999984 5688999999998652        11   34444433  222    2222  345788877644


Q ss_pred             --ccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhccCCCCceEEEEeecCccccCCCCcccccccccc
Q 026972          122 --GYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARHRSKPRVYIGCMKSGPVLGQKGVKYHEPEYWKF  199 (230)
Q Consensus       122 --~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~~~~~y~G~~~~~~v~r~~~~K~~v~~~~~~  199 (230)
                        ++.+++.|+...+++.. +++++|++|+|||+||++++|+++|...++.+++|+|+.....++|.   ++++|...  
T Consensus        72 ~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~---~~~~~~~~--  145 (280)
T 2j0a_A           72 EHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHA---SELQSKQR--  145 (280)
T ss_dssp             -----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------
T ss_pred             cccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccc---cccCcccc--
Confidence              67889999999998754 36999999999999999999999999998888999998765545442   34555322  


Q ss_pred             CCCCCCCCcCc-ccceeeeCHHHHHHHHh
Q 026972          200 GEEGNKYFRHA-TGQIYAISKDLATYISA  227 (230)
Q Consensus       200 ~y~~~~yPpy~-~G~~YimS~dl~~~i~~  227 (230)
                       ++...| +|| +|+||+||+.++++|+.
T Consensus       146 -~~~~~~-~y~~GGaG~vlSr~~l~~l~~  172 (280)
T 2j0a_A          146 -TKLVRF-WFATGGAGFCINRQLALKMVP  172 (280)
T ss_dssp             ------C-CEECGGGCEEEEHHHHHHHHH
T ss_pred             -cccccc-CcccCCCEEEECHHHHHHHHH
Confidence             112244 466 67899999999999986

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=93.87  E-value=1.8  Score=34.90  Aligned_cols=130  Identities=5%  Similarity=-0.089  Sum_probs=70.2

Q ss_pred             ceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEeccccc-----CcchHHHHHHHHHHHhcCCceEEEEecCceeEeH
Q 026972           83 GIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGY-----HELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNL  157 (230)
Q Consensus        83 ~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~y-----~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~  157 (230)
                      .+.++.|-..+.   +.. ..+.++......|..+.....-     .|.  -.-.+++.+.+..+.+|++..|+|.++.+
T Consensus        30 ~~eiivvDd~S~---d~t-~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~--G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~  103 (255)
T 1qg8_A           30 DFELFIMDDNSN---EET-LNVIRPFLNDNRVRFYQSDISGVKERTEKT--RYAALINQAIEMAEGEYITYATDDNIYMP  103 (255)
T ss_dssp             CEEEEEEECSCC---HHH-HHHHGGGGGSTTEEEEECCCCSHHHHHSSC--HHHHHHHHHHHHCCCSEEEEEETTEEECT
T ss_pred             ceEEEEEECCCC---chH-HHHHHHHhhcCCEEEEeccccccccccccc--CHHHHHHHHHHHcCCCEEEEeCCCCccCh
Confidence            456666655443   222 2233333335566555443111     232  23445666666668899999999999998


Q ss_pred             HHHHHHHhccC--CCCceEEEEee----c--CccccCCCCccccccccccCCCCCCCCcCcccceeeeCHHHHHHHH
Q 026972          158 GMVGSTLARHR--SKPRVYIGCMK----S--GPVLGQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS  226 (230)
Q Consensus       158 ~~L~~~L~~~~--~~~~~y~G~~~----~--~~v~r~~~~K~~v~~~~~~~y~~~~yPpy~~G~~YimS~dl~~~i~  226 (230)
                      +.|...+....  +.-.+..|...    .  +.++    ..+..|.. .+   ......++.|++.++.+++++.+.
T Consensus       104 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~-~~---~~~~~~~~~~~~~~~rr~~~~~~g  172 (255)
T 1qg8_A          104 DRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIV----KETVRPAA-QV---TWNAPCAIDHCSVMHRYSVLEKVK  172 (255)
T ss_dssp             THHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEE----EEEEECCC-SC---BSCCTTTSCGGGEEEETHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcch----hhccCchH-HH---HHhhcCCCccceEEEEHHHHHhhc
Confidence            87777665543  23344444331    1  1111    11112211 01   013344578999999999998864

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=93.12  E-value=3  Score=37.39  Aligned_cols=78  Identities=14%  Similarity=0.044  Sum_probs=47.9

Q ss_pred             eEEEEEeecCCCCCchhhhhHHHHHhhCC-cEEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHH
Q 026972           84 IIMRFVIGHSATAGGVLDRAIDAEDEQHK-DFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGS  162 (230)
Q Consensus        84 v~~~FvvG~~~~~~~~~~~~l~~E~~~~g-Dil~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~  162 (230)
                      ..++.|-..+.  +....+.|.+-.+.+. .+.++...+.. +    .-.+...+.+....+|++..|+|+.+.++-|..
T Consensus        62 ~EIIvVDd~S~--d~~t~~~l~~~~~~~~~~v~vi~~~~n~-G----~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~  134 (472)
T 1xhb_A           62 EEIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQRS-G----LIRARLKGAAVSRGQVITFLDAHCECTAGWLEP  134 (472)
T ss_dssp             EEEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSSCC-C----HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHH
T ss_pred             eEEEEEECCCC--cHHHHHHHHHHHHHCCCcEEEEECCCCC-C----hHHHHHHHHHhccCCeEEEECCCeEeCccHHHH
Confidence            34555544443  3345555655556676 56666554432 2    233444555556789999999999999887777


Q ss_pred             HHhccC
Q 026972          163 TLARHR  168 (230)
Q Consensus       163 ~L~~~~  168 (230)
                      .+....
T Consensus       135 ll~~~~  140 (472)
T 1xhb_A          135 LLARIK  140 (472)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            666543

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=91.57  E-value=5.2  Score=37.17  Aligned_cols=85  Identities=12%  Similarity=0.028  Sum_probs=49.0

Q ss_pred             EEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHHH
Q 026972           85 IMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTL  164 (230)
Q Consensus        85 ~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L  164 (230)
                      .++.|-..+.  +..+.+.|.+-.+.+..|.++...... ++    ..+.+.+.+....+|++..|+|+.+.++-|...+
T Consensus       146 EIIVVDDgS~--D~tl~~~l~~~~~~~~~v~vi~~~~n~-G~----~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll  218 (570)
T 2d7i_A          146 EIVLVDDFSD--REHLKKPLEDYMALFPSVRILRTKKRE-GL----IRTRMLGASVATGDVITFLDSHCEANVNWLPPLL  218 (570)
T ss_dssp             EEEEEECSCC--CGGGTHHHHHHHTTSTTEEEEECSSCC-CH----HHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHH
T ss_pred             EEEEEECCCC--cHHHHHHHHHHHHhCCeEEEEECCCCC-CH----HHHHHHHHHhcCCCEEEEEcCCccccccHHHHHH
Confidence            4555544443  333355566656677777666544332 22    2334444444578999999999999887666655


Q ss_pred             hccCCCCceEEE
Q 026972          165 ARHRSKPRVYIG  176 (230)
Q Consensus       165 ~~~~~~~~~y~G  176 (230)
                      ......+...+|
T Consensus       219 ~~l~~~~~~vv~  230 (570)
T 2d7i_A          219 DRIARNRKTIVC  230 (570)
T ss_dssp             HHHHHCTTEEEE
T ss_pred             HHHHhCCCEEEe
Confidence            544322334444

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=89.76  E-value=7.4  Score=37.07  Aligned_cols=36  Identities=22%  Similarity=0.254  Sum_probs=27.4

Q ss_pred             HHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhcc
Q 026972          132 IYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARH  167 (230)
Q Consensus       132 ~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~  167 (230)
                      .+++.+....+++|++..|||+.+.++.|...+...
T Consensus       258 ~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l  293 (657)
T 4fix_A          258 RVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMH  293 (657)
T ss_dssp             HHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHH
Confidence            356666554478999999999999998777766544

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=86.78  E-value=10  Score=29.90  Aligned_cols=76  Identities=11%  Similarity=0.051  Sum_probs=47.5

Q ss_pred             ceEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHH
Q 026972           83 GIIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGS  162 (230)
Q Consensus        83 ~v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~  162 (230)
                      .+.++.|-..+.   +...+.+.+-.+++..|.++. .+   |..  .-.+.+.+.+..+.+|++..|+|.++.++.|..
T Consensus        34 ~~eiIvvDd~S~---d~t~~~~~~~~~~~~~i~~i~-~~---n~G--~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~  104 (240)
T 3bcv_A           34 DIEIILIDDESP---DNCPKICDDYAAQYPNIKVIH-KK---NAG--LGMACNSGLDVATGEYVAFCDSDDYVDSDMYMT  104 (240)
T ss_dssp             SEEEEEEECCCS---SSHHHHHHHHHHHCSSEEEEE-CC---CCC--HHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHH
T ss_pred             CeEEEEEECCCC---cCHHHHHHHHHhhCCCEEEEE-CC---CCC--hHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHH
Confidence            456666654443   233344555555677776664 22   221  234455555556789999999999999887777


Q ss_pred             HHhcc
Q 026972          163 TLARH  167 (230)
Q Consensus       163 ~L~~~  167 (230)
                      .+...
T Consensus       105 l~~~~  109 (240)
T 3bcv_A          105 MYNVA  109 (240)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66554

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=81.73  E-value=29  Score=31.16  Aligned_cols=74  Identities=12%  Similarity=-0.097  Sum_probs=44.6

Q ss_pred             eEEEEEeecCCCCCchhhhhHHHHHhhCCcEEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHH
Q 026972           84 IIMRFVIGHSATAGGVLDRAIDAEDEQHKDFLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGST  163 (230)
Q Consensus        84 v~~~FvvG~~~~~~~~~~~~l~~E~~~~gDil~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~  163 (230)
                      +.+++|-..+.  +...    ....+.+..+.++......   -  .-.++..+.+....+|++..|+|+.+.++-|...
T Consensus        99 ~EIIvVDDgS~--D~t~----~~~~~~~~~v~vi~~~~n~---G--~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~l  167 (501)
T 2ffu_A           99 KEIILVDDYSN--DPED----GALLGKIEKVRVLRNDRRE---G--LMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPL  167 (501)
T ss_dssp             EEEEEEECSCS--CTHH----HHGGGGBTTEEEEECSSCC---H--HHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHH
T ss_pred             eeEEEEECCCC--chHH----HHHHhcCCCEEEEECCCCc---C--HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHH
Confidence            45566554443  2322    2223456666666543322   1  2345555555567899999999999998877777


Q ss_pred             HhccC
Q 026972          164 LARHR  168 (230)
Q Consensus       164 L~~~~  168 (230)
                      +....
T Consensus       168 l~~~~  172 (501)
T 2ffu_A          168 LERVA  172 (501)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	230
d1omza_	265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	88.34
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	83.36

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.34  E-value=0.89  Score=33.46  Aligned_cols=31  Identities=13%  Similarity=0.160  Sum_probs=25.7

Q ss_pred             hcCCceEEEEecCceeEeHHHHHHHHhccCC
Q 026972          139 AKWDADFYIKVDDDVHVNLGMVGSTLARHRS  169 (230)
Q Consensus       139 ~~~~~~fvlK~DDD~fvn~~~L~~~L~~~~~  169 (230)
                      +..+.+|++..|||.++.++.|...+.....
T Consensus        78 ~~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~  108 (265)
T d1omza_          78 PEVETNAVLMVDDDTLISAQDLVFAFSIWQQ  108 (265)
T ss_dssp             TTCCSSEEEEECTTEEECHHHHHHHHHHHTT
T ss_pred             HhCCcCEEEEeCcccCCCHHHHHHHHHHHHh
Confidence            3457899999999999999988888776654

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.36  E-value=8.8  Score=30.11  Aligned_cols=66  Identities=14%  Similarity=0.036  Sum_probs=39.6

Q ss_pred             CchhhhhHHHHHhhCCc-EEEEecccccCcchHHHHHHHHHHHhcCCceEEEEecCceeEeHHHHHHHHhcc
Q 026972           97 GGVLDRAIDAEDEQHKD-FLRLNHIEGYHELSSKTQIYFSTAVAKWDADFYIKVDDDVHVNLGMVGSTLARH  167 (230)
Q Consensus        97 ~~~~~~~l~~E~~~~gD-il~~d~~D~y~nlt~Ktl~~l~w~~~~~~~~fvlK~DDD~fvn~~~L~~~L~~~  167 (230)
                      +....+.+.+-.+.+.+ |.++...... +    .-.+.+.+.+..+.+|++.+|+|+.+.++.|...+...
T Consensus        66 d~~~~~~l~~~~~~~~~~i~vi~~~~n~-G----~~~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~~~  132 (328)
T d1xhba2          66 RDFLKRPLESYVKKLKVPVHVIRMEQRS-G----LIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARI  132 (328)
T ss_dssp             CGGGTHHHHHHHHSSSSCEEEEECSSCC-C----HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHH
T ss_pred             hhhHHHHHHHHHHhcCCCeEEEEecccc-c----chHHHHHHHHhhhcceeeecCcccccChhHHHHHHHHH
Confidence            34444444444455554 4444433322 1    12355666666788999999999999988776665443