Citrus Sinensis ID: 026977

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
MEMEGKIQKNSRFKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVHHGGGNVIGIIPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEEYVPVHDGVIAKASWEVDKQQAQQQVGFKATTLQTEVASAL
cccccccccccccccEEEEccccccccHHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHcccEEEEEcccccHHHHccccccccEEEcccHHHHHHHHHHHccEEEEcccccccHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHcccccccccccEEEcccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccHHHHHHHHcc
ccccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHcccEEEEEEcHHHcHHHHccccccEEEEEccHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHHcccccHHHHcEEEEcccHHHHHHHHHHcccccccccccccHHHHHcccccccccccHHHHHHHHHcc
memegkiqknsrfKRVCVfcgsstgkrncysdAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVhhgggnvigiiprtlmnkeitgetvgevrpvadMHQRKAEMARHSDcfialpggygtLEELLEVITWAQlgihdkpvgllnvdGYYNYLLTFIDKavddgfikpsqrniivsAPNAKELVQKLEEYVPVHDGVIAKASWEVDKQQAQQQVGFKATTLQTEVASAL
memegkiqknsrfkrVCVFCGsstgkrncySDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVHHGGGNVIGIIPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEEYVPVHDGVIAKASWEVDKQQAQQQVGFKATTLQTEVASAL
MEMEGKIQKNSRFKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAvhhgggnvigiiPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEEYVPVHDGVIAKASWEVDKQQAQQQVGFKATTLQTEVASAL
************FKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVHHGGGNVIGIIPRTLMNKEITGETVGEVRPVAD*******MARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEEYVPVHDGVIAKASWEVD***********************
***************VCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVHHGGGNVIGIIPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEEYVPVHDGVIAKASWE****************LQTEVA***
*********NSRFKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVHHGGGNVIGIIPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEEYVPVHDGVIAKASWE************KATT*********
***********RFKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVHHGGGNVIGIIPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEEYVPVHDGVIAKASWEVDKQQ********************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEMEGKIQKNSRFKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVHHGGGNVIGIIPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEEYVPVHDGVIAKASWEVDKQQAQQQVGFKATTLQTEVASAL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query230 2.2.26 [Sep-21-2011]
Q8LBB7228 Cytokinin riboside 5'-mon yes no 0.947 0.956 0.807 1e-101
Q8L8B8215 Cytokinin riboside 5'-mon no no 0.904 0.967 0.745 3e-91
Q9LFH3215 Cytokinin riboside 5'-mon no no 0.904 0.967 0.730 5e-89
Q8GW29217 Cytokinin riboside 5'-mon no no 0.873 0.926 0.752 2e-87
B9F166244 Probable cytokinin ribosi yes no 0.886 0.836 0.730 2e-87
Q8RUN2213 Cytokinin riboside 5'-mon no no 0.904 0.976 0.710 2e-87
Q7XDB8204 Probable cytokinin ribosi yes no 0.860 0.970 0.772 1e-86
Q8H7U8211 Probable cytokinin ribosi no no 0.852 0.928 0.775 3e-86
Q0JBP5250 Probable cytokinin ribosi no no 0.865 0.796 0.738 6e-86
Q9LYV8201 Probable cytokinin ribosi no no 0.817 0.935 0.760 1e-81
>sp|Q8LBB7|LOG5_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 OS=Arabidopsis thaliana GN=LOG5 PE=1 SV=1 Back     alignment and function desciption
 Score =  367 bits (943), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/223 (80%), Positives = 196/223 (87%), Gaps = 5/223 (2%)

Query: 10  NSRFKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVHHGG 69
            SRFKRVCVFCGSS+GKR CYSDAA DLA ELV RRL+LVYGGGSIGLMGLVS+AVH  G
Sbjct: 5   KSRFKRVCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAVHEAG 64

Query: 70  GNVIGIIPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEV 129
           G+V+GIIPRTLM+KEITGET GEV  VADMH+RKAEMARHSDCFIALPGGYGTLEELLEV
Sbjct: 65  GHVLGIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEELLEV 124

Query: 130 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLE 189
           I WAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQR+I VSAPNAKELVQKLE
Sbjct: 125 IAWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQKLE 184

Query: 190 EYVPVHDGVIAKASWEVDKQQAQQQVGFKA-----TTLQTEVA 227
            Y PV+DGVIAK+ WEV+K+  Q Q   +      T++QTE+A
Sbjct: 185 AYKPVNDGVIAKSRWEVEKKVQQPQQQQQVVFCSNTSMQTEIA 227
Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 2EC: .EC: nEC: 1
>sp|Q8L8B8|LOG3_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana GN=LOG3 PE=1 SV=1 Back     alignment and function description
>sp|Q9LFH3|LOG4_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana GN=LOG4 PE=1 SV=1 Back     alignment and function description
>sp|Q8GW29|LOG7_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis thaliana GN=LOG7 PE=1 SV=2 Back     alignment and function description
>sp|B9F166|LOGL2_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica GN=LOGL2 PE=3 SV=1 Back     alignment and function description
>sp|Q8RUN2|LOG1_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana GN=LOG1 PE=1 SV=1 Back     alignment and function description
>sp|Q7XDB8|LOGLA_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryza sativa subsp. japonica GN=LOGL10 PE=2 SV=1 Back     alignment and function description
>sp|Q8H7U8|LOGL3_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3 OS=Oryza sativa subsp. japonica GN=LOGL3 PE=2 SV=1 Back     alignment and function description
>sp|Q0JBP5|LOGL6_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica GN=LOGL6 PE=2 SV=1 Back     alignment and function description
>sp|Q9LYV8|LOG6_ARATH Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG6 OS=Arabidopsis thaliana GN=LOG6 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query230
225428197229 PREDICTED: cytokinin riboside 5'-monopho 0.943 0.947 0.904 1e-109
255569542235 carboxy-lyase, putative [Ricinus communi 0.982 0.961 0.851 1e-108
224078472206 predicted protein [Populus trichocarpa] 0.895 1.0 0.912 1e-108
224105085206 predicted protein [Populus trichocarpa] 0.895 1.0 0.893 1e-106
359492329268 PREDICTED: cytokinin riboside 5'-monopho 0.891 0.764 0.870 1e-104
147797810214 hypothetical protein VITISV_000977 [Viti 0.865 0.929 0.899 1e-103
302141674214 unnamed protein product [Vitis vinifera] 0.865 0.929 0.899 1e-103
147866206266 hypothetical protein VITISV_025067 [Viti 0.973 0.842 0.763 1e-103
449444374252 PREDICTED: cytokinin riboside 5'-monopho 0.978 0.892 0.807 1e-103
224083235221 predicted protein [Populus trichocarpa] 0.943 0.981 0.8 1e-102
>gi|225428197|ref|XP_002281839.1| PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 [Vitis vinifera] gi|297744519|emb|CBI37781.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/221 (90%), Positives = 208/221 (94%), Gaps = 4/221 (1%)

Query: 11  SRFKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVHHGGG 70
           SRFK VCVFCGSSTGKRNCY DAA++L  ELVARRLDLVYGGGSIGLMGLVS+AVH GGG
Sbjct: 8   SRFKSVCVFCGSSTGKRNCYRDAAVELGQELVARRLDLVYGGGSIGLMGLVSQAVHRGGG 67

Query: 71  NVIGIIPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVI 130
           +V+GIIPRTLM KEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVI
Sbjct: 68  HVLGIIPRTLMCKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVI 127

Query: 131 TWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEE 190
           TWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQR+IIVSAPNAKELVQKLEE
Sbjct: 128 TWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNAKELVQKLEE 187

Query: 191 YVPVHDGVIAKASWEVD----KQQAQQQVGFKATTLQTEVA 227
           YVPVHDGVIAKA WEV+    +QQ QQQVGF ATTLQTEVA
Sbjct: 188 YVPVHDGVIAKARWEVEQQQHQQQQQQQVGFNATTLQTEVA 228

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255569542|ref|XP_002525737.1| carboxy-lyase, putative [Ricinus communis] gi|223534951|gb|EEF36636.1| carboxy-lyase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224078472|ref|XP_002305546.1| predicted protein [Populus trichocarpa] gi|222848510|gb|EEE86057.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224105085|ref|XP_002313681.1| predicted protein [Populus trichocarpa] gi|222850089|gb|EEE87636.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359492329|ref|XP_002285924.2| PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147797810|emb|CAN74076.1| hypothetical protein VITISV_000977 [Vitis vinifera] Back     alignment and taxonomy information
>gi|302141674|emb|CBI18877.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147866206|emb|CAN79419.1| hypothetical protein VITISV_025067 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449444374|ref|XP_004139950.1| PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like isoform 1 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224083235|ref|XP_002306969.1| predicted protein [Populus trichocarpa] gi|222856418|gb|EEE93965.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query230
TAIR|locus:2132821228 LOG5 "AT4G35190" [Arabidopsis 0.943 0.951 0.792 5.3e-88
TAIR|locus:2084051215 LOG4 "AT3G53450" [Arabidopsis 0.904 0.967 0.692 1.7e-75
TAIR|locus:2828223213 LOG1 "AT2G28305" [Arabidopsis 0.860 0.929 0.717 4e-74
TAIR|locus:2164280217 LOG7 "AT5G06300" [Arabidopsis 0.873 0.926 0.712 5.9e-73
TAIR|locus:2143473201 LOG6 "AT5G03270" [Arabidopsis 0.817 0.935 0.718 3.5e-68
TAIR|locus:2039175213 LOG2 "AT2G35990" [Arabidopsis 0.860 0.929 0.636 1.1e-66
TAIR|locus:2143029216 LOG8 "LONELY GUY 8" [Arabidops 0.869 0.925 0.61 2.3e-64
UNIPROTKB|Q5ZC82242 LOG "Cytokinin riboside 5'-mon 0.847 0.805 0.632 1.4e-62
TIGR_CMR|GSU_2766196 GSU_2766 "decarboxylase family 0.843 0.989 0.467 1.4e-41
UNIPROTKB|Q4KJ50195 PFL_0591 "Uncharacterized prot 0.773 0.912 0.460 1.1e-37
TAIR|locus:2132821 LOG5 "AT4G35190" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 176/222 (79%), Positives = 190/222 (85%)

Query:    11 SRFKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAXXXXXX 70
             SRFKRVCVFCGSS+GKR CYSDAA DLA ELV RRL+LVYGGGSIGLMGLVS+A      
Sbjct:     6 SRFKRVCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAVHEAGG 65

Query:    71 XXXXXXPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVI 130
                   PRTLM+KEITGET GEV  VADMH+RKAEMARHSDCFIALPGGYGTLEELLEVI
Sbjct:    66 HVLGIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEELLEVI 125

Query:   131 TWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNAKELVQKLEE 190
              WAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQR+I VSAPNAKELVQKLE 
Sbjct:   126 AWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQKLEA 185

Query:   191 YVPVHDGVIAKASWEVDKQ----QAQQQVGFKA-TTLQTEVA 227
             Y PV+DGVIAK+ WEV+K+    Q QQQV F + T++QTE+A
Sbjct:   186 YKPVNDGVIAKSRWEVEKKVQQPQQQQQVVFCSNTSMQTEIA 227
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0005634 "nucleus" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2084051 LOG4 "AT3G53450" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2828223 LOG1 "AT2G28305" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164280 LOG7 "AT5G06300" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143473 LOG6 "AT5G03270" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2039175 LOG2 "AT2G35990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143029 LOG8 "LONELY GUY 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZC82 LOG "Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2766 GSU_2766 "decarboxylase family protein" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KJ50 PFL_0591 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7XDB8LOGLA_ORYSJ3, ., 2, ., 2, ., n, 10.77270.86080.9705yesno
Q8L8B8LOG3_ARATH3, ., 2, ., 2, ., n, 10.74510.90430.9674nono
B7E7M8LOGL9_ORYSJ3, ., 2, ., 2, ., n, 10.72020.83470.8458nono
Q8RUN2LOG1_ARATH3, ., 2, ., 2, ., n, 10.71020.90430.9765nono
Q8GW29LOG7_ARATH3, ., 2, ., 2, ., n, 10.75240.87390.9262nono
Q8H7U8LOGL3_ORYSJ3, ., 2, ., 2, ., n, 10.77550.85210.9289nono
Q9LYV8LOG6_ARATH3, ., 2, ., 2, ., n, 10.76060.81730.9353nono
Q9LFH3LOG4_ARATH3, ., 2, ., 2, ., n, 10.73070.90430.9674nono
Q8LBB7LOG5_ARATH3, ., 2, ., 2, ., n, 10.80710.94780.9561yesno
B9F166LOGL2_ORYSJ3, ., 2, ., 2, ., n, 10.73030.88690.8360yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.2.n10.994
3rd Layer3.2.20.998

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00036224001
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (229 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query230
pfam03641130 pfam03641, Lysine_decarbox, Possible lysine decarb 9e-67
TIGR00730178 TIGR00730, TIGR00730, TIGR00730 family protein 7e-56
COG1611205 COG1611, COG1611, Predicted Rossmann fold nucleoti 4e-51
TIGR00725159 TIGR00725, TIGR00725, TIGR00725 family protein 2e-08
pfam00980 396 pfam00980, Rota_Capsid_VP6, Rotavirus major capsid 0.001
>gnl|CDD|217655 pfam03641, Lysine_decarbox, Possible lysine decarboxylase Back     alignment and domain information 
 Score =  201 bits (514), Expect = 9e-67
 Identities = 70/130 (53%), Positives = 90/130 (69%)

Query: 58  MGLVSKAVHHGGGNVIGIIPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALP 117
           MG V+      GG VIGIIP  L  +EI    V E+  V DMH+RKA MAR +D F+ALP
Sbjct: 1   MGAVADGALEAGGRVIGIIPNILAPEEIPNPIVTELIIVPDMHERKAAMARLADAFVALP 60

Query: 118 GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVS 177
           GG+GTLEEL E++TW QLGIH KP+ LLN +GYY+ LL FID  V++GFI P+ R +I+ 
Sbjct: 61  GGFGTLEELFEILTWIQLGIHQKPIILLNPNGYYDPLLEFIDHMVEEGFISPAARELIIV 120

Query: 178 APNAKELVQK 187
             + +E V+K
Sbjct: 121 VDDPEEAVEK 130

The members of this family share a highly conserved motif PGGXGTXXE that is probably functionally important. This family includes proteins annotated as lysine decarboxylases, although the evidence for this is not clear. Length = 130
>gnl|CDD|129813 TIGR00730, TIGR00730, TIGR00730 family protein Back     alignment and domain information
>gnl|CDD|224527 COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only] Back     alignment and domain information
>gnl|CDD|129808 TIGR00725, TIGR00725, TIGR00725 family protein Back     alignment and domain information
>gnl|CDD|189790 pfam00980, Rota_Capsid_VP6, Rotavirus major capsid protein VP6 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 230
TIGR00730178 conserved hypothetical protein, DprA/Smf-related, 100.0
COG1611205 Predicted Rossmann fold nucleotide-binding protein 100.0
TIGR00725159 conserved hypothetical protein, DprA/Smf-related, 100.0
PF03641133 Lysine_decarbox: Possible lysine decarboxylase; In 100.0
TIGR00732220 dprA DNA protecting protein DprA. Disruption of th 99.64
PF02481212 DNA_processg_A: DNA recombination-mediator protein 99.37
PRK10736374 hypothetical protein; Provisional 99.24
COG0758350 Smf Predicted Rossmann fold nucleotide-binding pro 98.97
PF12694145 MoCo_carrier: Putative molybdenum carrier; InterPr 96.83
PF05014113 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransfer 95.27
PF13528318 Glyco_trans_1_3: Glycosyl transferase family 1 95.01
TIGR01133348 murG undecaprenyldiphospho-muramoylpentapeptide be 94.41
PF06908177 DUF1273: Protein of unknown function (DUF1273); In 94.17
COG0707357 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami 93.86
PRK13609380 diacylglycerol glucosyltransferase; Provisional 93.5
cd03785350 GT1_MurG MurG is an N-acetylglucosaminyltransferas 93.49
KOG3614 1381 consensus Ca2+/Mg2+-permeable cation channels (LTR 92.86
TIGR01426392 MGT glycosyltransferase, MGT family. This model de 92.17
PLN02605382 monogalactosyldiacylglycerol synthase 92.13
PF11071141 DUF2872: Protein of unknown function (DUF2872); In 91.69
PF1068671 DUF2493: Protein of unknown function (DUF2493); In 91.51
PRK13608391 diacylglycerol glucosyltransferase; Provisional 91.19
PRK00025380 lpxB lipid-A-disaccharide synthase; Reviewed 90.97
PF06258311 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP 90.58
PRK10565508 putative carbohydrate kinase; Provisional 90.06
TIGR00661321 MJ1255 conserved hypothetical protein. This model 89.52
PRK12446352 undecaprenyldiphospho-muramoylpentapeptide beta-N- 89.51
cd03784401 GT1_Gtf_like This family includes the Gtfs, a grou 89.12
COG3660329 Predicted nucleoside-diphosphate-sugar epimerase [ 89.08
TIGR03646144 YtoQ_fam YtoQ family protein. Members of this fami 88.8
TIGR00215385 lpxB lipid-A-disaccharide synthase. Lipid-A precur 88.5
TIGR03590279 PseG pseudaminic acid biosynthesis-associated prot 88.0
COG3613172 Nucleoside 2-deoxyribosyltransferase [Nucleotide t 85.92
PRK13660182 hypothetical protein; Provisional 85.79
PF04101167 Glyco_tran_28_C: Glycosyltransferase family 28 C-t 84.93
cd03786363 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th 80.83
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2 Back     alignment and domain information 
Probab=100.00  E-value=7.4e-55  Score=366.95  Aligned_cols=178  Identities=43%  Similarity=0.830  Sum_probs=170.8

Q ss_pred             ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchHHHHHHHHHhcCCeEEEEeCCcccccccCCCCCceE
Q 026977           14 KRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVHHGGGNVIGIIPRTLMNKEITGETVGEV   93 (230)
Q Consensus        14 ~~V~VfggS~~~~~~~~~~~A~~LG~~LA~~g~~lVtGGg~~GlM~ava~gA~~~GG~viGI~P~~~~~~e~~~~~~~e~   93 (230)
                      ++|||||||+.++++.|++.|++||++||++||+||||||..|+|+|++++|+++||+|+||+|..+...+.+++.++++
T Consensus         1 ~~i~V~~~s~~~~~~~~~~~A~~lG~~la~~g~~lV~GGg~~GlM~a~a~ga~~~gG~viGi~p~~l~~~~~~~~~~~~~   80 (178)
T TIGR00730         1 KTVCVYCGSSPGGNAAYKELAAELGAYLAGQGWGLVYGGGRVGLMGAIADAAMENGGTAVGVNPSGLFSGEVVHQNLTEL   80 (178)
T ss_pred             CEEEEECcCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCChHhHHHHHHHHHHhcCCeEEEecchhhhhhhccCCCCCce
Confidence            47999999999999999999999999999999999999995599999999999999999999999887777778888899


Q ss_pred             eecCCHHHHHHHHHhhcCeEEEecCCcccHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccccC
Q 026977           94 RPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRN  173 (230)
Q Consensus        94 i~~~~m~~Rk~~m~~~sDa~I~lPGG~GTL~El~~~~t~~qlg~~~kPivlln~~G~~~~l~~~l~~~~~~gfi~~~~~~  173 (230)
                      +++++|++||.+|++.|||||+||||+|||+|++++|+|.|+|+|+||++++|.+|||+++++|+++|+++||++++..+
T Consensus        81 i~~~~~~~Rk~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~~l~~~l~~~~~~gfi~~~~~~  160 (178)
T TIGR00730        81 IEVNGMHERKAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFDGLVEWLKYSIQEGFISESHLK  160 (178)
T ss_pred             EEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHHHHHHHHHHHHHCCCCCHHHcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEcCCHHHHHHHHHhh
Q 026977          174 IIVSAPNAKELVQKLEEY  191 (230)
Q Consensus       174 ~i~~~~d~ee~~~~l~~~  191 (230)
                      .++++||++|++++|++|
T Consensus       161 ~~~~~d~~~e~~~~i~~~  178 (178)
T TIGR00730       161 LIHVVSRPDELIEQVQNY  178 (178)
T ss_pred             cEEEcCCHHHHHHHHHhC
Confidence            999999999999999763

This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only] Back     alignment and domain information
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1 Back     alignment and domain information
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway Back     alignment and domain information
>TIGR00732 dprA DNA protecting protein DprA Back     alignment and domain information
>PF02481 DNA_processg_A: DNA recombination-mediator protein A; InterPro: IPR003488 The SMF family, of DNA processing chain A, dprA, are a group of bacterial proteins Back     alignment and domain information
>PRK10736 hypothetical protein; Provisional Back     alignment and domain information
>COG0758 Smf Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion] Back     alignment and domain information
>PF12694 MoCo_carrier: Putative molybdenum carrier; InterPro: IPR024755 The structure of proteins in this family contain central beta strands with flanking alpha helices Back     alignment and domain information
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2 Back     alignment and domain information
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain Back     alignment and domain information
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis Back     alignment and domain information
>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>TIGR01426 MGT glycosyltransferase, MGT family Back     alignment and domain information
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis Back     alignment and domain information
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61 Back     alignment and domain information
>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins Back     alignment and domain information
>PRK10565 putative carbohydrate kinase; Provisional Back     alignment and domain information
>TIGR00661 MJ1255 conserved hypothetical protein Back     alignment and domain information
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed Back     alignment and domain information
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin Back     alignment and domain information
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03646 YtoQ_fam YtoQ family protein Back     alignment and domain information
>TIGR00215 lpxB lipid-A-disaccharide synthase Back     alignment and domain information
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG Back     alignment and domain information
>COG3613 Nucleoside 2-deoxyribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK13660 hypothetical protein; Provisional Back     alignment and domain information
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query230
2a33_A215 X-Ray Structure Of A Lysine Decarboxylase-Like Prot 4e-75
1ydh_A216 X-Ray Structure Of A Lysine Decarboxylase-Like Prot 4e-54
1t35_A191 Crystal Structure Of A Hypothetical Protein Yvdd- A 8e-31
3qua_A199 Crystal Structure Of A Putative Uncharacterized Pro 4e-23
3sbx_A189 Crystal Structure Of A Putative Uncharacterized Pro 1e-16
1wek_A217 Crystal Structure Of The Conserved Hypothetical Pro 5e-06
>pdb|2A33|A Chain A, X-Ray Structure Of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene At2g37210 Length = 215 Back     alignment and structure 
Iteration: 1

 Score =  277 bits (708), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 141/207 (68%), Positives = 167/207 (80%)
Query: 2   EMEGKIQKNSRFKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLV 61
           E++G+  + S+F+R+CVFCGSS GK++ Y DAA+DL +ELV+R +DLVYGGGSIGL GLV
Sbjct: 2   EIKGESXQKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLXGLV 61
Query: 62  SKAXXXXXXXXXXXXPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYG 121
           S+A            P+TL  +E+TGETVGEVR VAD HQRKAE A+HSD FIALPGGYG
Sbjct: 62  SQAVHDGGRHVIGIIPKTLXPRELTGETVGEVRAVADXHQRKAEXAKHSDAFIALPGGYG 121
Query: 122 TLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPNA 181
           TLEELLEVITWAQLGIHDKPVGLLNVDGYYN LL+FIDKAV++GFI P+ R IIVSAP A
Sbjct: 122 TLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTA 181
Query: 182 KELVQKLEEYVPVHDGVIAKASWEVDK 208
           KELV+KLEEY P H+ V  K  WE ++
Sbjct: 182 KELVKKLEEYAPCHERVATKLCWEXER 208
>pdb|1YDH|A Chain A, X-Ray Structure Of A Lysine Decarboxylase-Like Protein From Arabidopsis Thaliana Gene At5g11950 Length = 216 Back     alignment and structure
>pdb|1T35|A Chain A, Crystal Structure Of A Hypothetical Protein Yvdd- A Putative Lysine Decarboxylase Length = 191 Back     alignment and structure
>pdb|3QUA|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein And Possible Molybdenum Cofactor Protein From Mycobacterium Smegmatis Length = 199 Back     alignment and structure
>pdb|3SBX|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Marinum Bound To Adenosine 5'-Monophosphate Amp Length = 189 Back     alignment and structure
>pdb|1WEK|A Chain A, Crystal Structure Of The Conserved Hypothetical Protein Tt1465 From Thermus Thermophilus Hb8 Length = 217 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query230
2a33_A215 Hypothetical protein; structural genomics, protein 1e-115
1ydh_A216 AT5G11950; structural genomics, protein structure 1e-112
1t35_A191 Hypothetical protein YVDD, putative lysine decarbo 1e-106
3qua_A199 Putative uncharacterized protein; structural genom 1e-101
3sbx_A189 Putative uncharacterized protein; structural genom 1e-100
1weh_A171 Conserved hypothetical protein TT1887; rossman fol 1e-65
1wek_A217 Hypothetical protein TT1465; rossman fold, structu 3e-65
1rcu_A195 Conserved hypothetical protein VT76; structural ge 5e-63
2iz6_A176 Molybdenum cofactor carrier protein; metal transpo 4e-52
3bq9_A460 Predicted rossmann fold nucleotide-binding domain 8e-27
3gh1_A462 Predicted nucleotide-binding protein; structural g 9e-27
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A Length = 215 Back     alignment and structure
 Score =  327 bits (840), Expect = e-115
 Identities = 155/208 (74%), Positives = 183/208 (87%)

Query: 1   MEMEGKIQKNSRFKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGL 60
           ME++G+  + S+F+R+CVFCGSS GK++ Y DAA+DL +ELV+R +DLVYGGGSIGLMGL
Sbjct: 1   MEIKGESMQKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGL 60

Query: 61  VSKAVHHGGGNVIGIIPRTLMNKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGY 120
           VS+AVH GG +VIGIIP+TLM +E+TGETVGEVR VADMHQRKAEMA+HSD FIALPGGY
Sbjct: 61  VSQAVHDGGRHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGY 120

Query: 121 GTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIIVSAPN 180
           GTLEELLEVITWAQLGIHDKPVGLLNVDGYYN LL+FIDKAV++GFI P+ R IIVSAP 
Sbjct: 121 GTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPT 180

Query: 181 AKELVQKLEEYVPVHDGVIAKASWEVDK 208
           AKELV+KLEEY P H+ V  K  WE+++
Sbjct: 181 AKELVKKLEEYAPCHERVATKLCWEMER 208
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A Length = 216 Back     alignment and structure
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1 Length = 191 Back     alignment and structure
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str} Length = 199 Back     alignment and structure
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M} Length = 189 Back     alignment and structure
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1 Length = 171 Back     alignment and structure
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1 Length = 217 Back     alignment and structure
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1 Length = 195 Back     alignment and structure
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A Length = 176 Back     alignment and structure
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica} Length = 460 Back     alignment and structure
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A Length = 462 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query230
1ydh_A216 AT5G11950; structural genomics, protein structure 100.0
2a33_A215 Hypothetical protein; structural genomics, protein 100.0
3sbx_A189 Putative uncharacterized protein; structural genom 100.0
3qua_A199 Putative uncharacterized protein; structural genom 100.0
1t35_A191 Hypothetical protein YVDD, putative lysine decarbo 100.0
1wek_A217 Hypothetical protein TT1465; rossman fold, structu 100.0
1weh_A171 Conserved hypothetical protein TT1887; rossman fol 100.0
3gh1_A462 Predicted nucleotide-binding protein; structural g 100.0
1rcu_A195 Conserved hypothetical protein VT76; structural ge 100.0
3bq9_A460 Predicted rossmann fold nucleotide-binding domain 100.0
2iz6_A176 Molybdenum cofactor carrier protein; metal transpo 100.0
3maj_A382 DNA processing chain A; MCSG, PSI-2, structural ge 99.36
3uqz_A288 DNA processing protein DPRA; SAM and rossmann fold 99.29
3imk_A158 Putative molybdenum carrier protein; YP_461806.1, 97.77
2nx2_A181 Hypothetical protein YPSA; structural genomics, un 97.56
2f62_A161 Nucleoside 2-deoxyribosyltransferase; SGPP, struct 95.27
2khz_A165 C-MYC-responsive protein RCL; flexible loop, nucle 95.2
3ehd_A162 Uncharacterized conserved protein; PSI,MCSG,PF0501 94.91
2o6l_A170 UDP-glucuronosyltransferase 2B7; drug metabolism, 94.73
3otg_A412 CALG1; calicheamicin, TDP, structural genomics, PS 93.98
1f8y_A157 Nucleoside 2-deoxyribosyltransferase; active site, 93.29
4fyk_A152 Deoxyribonucleoside 5'-monophosphate N-glycosidas; 93.15
3s2u_A365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 91.54
3hbm_A282 UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je 90.46
3rsc_A415 CALG2; TDP, enediyne, structural genomics, PSI-2, 90.44
2p6p_A384 Glycosyl transferase; X-RAY-diffraction,urdamycina 90.37
2jzc_A224 UDP-N-acetylglucosamine transferase subunit ALG13; 90.03
3ia7_A402 CALG4; glycosysltransferase, calicheamicin, enediy 90.0
2yjn_A441 ERYCIII, glycosyltransferase; transferase, cytochr 89.13
1s2d_A167 Purine trans deoxyribosylase; ribosylate intermedi 88.81
1rrv_A416 Glycosyltransferase GTFD; GT-B, glycosyltransferas 88.5
3h4t_A404 Glycosyltransferase GTFA, glycosyltransferase; van 88.36
1iir_A415 Glycosyltransferase GTFB; rossmann fold; 1.80A {Am 87.8
2iya_A424 OLEI, oleandomycin glycosyltransferase; carbohydra 87.28
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 81.72
3oti_A398 CALG3; calicheamicin, TDP, structural genomics, PS 81.2
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A Back     alignment and structure
Probab=100.00  E-value=1e-57  Score=393.49  Aligned_cols=199  Identities=65%  Similarity=1.146  Sum_probs=178.1

Q ss_pred             CcCCcceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchHHHHHHHHHhcCCeEEEEeCCcccccccCCC
Q 026977            9 KNSRFKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVHHGGGNVIGIIPRTLMNKEITGE   88 (230)
Q Consensus         9 ~~~~~~~V~VfggS~~~~~~~~~~~A~~LG~~LA~~g~~lVtGGg~~GlM~ava~gA~~~GG~viGI~P~~~~~~e~~~~   88 (230)
                      ..++|++|||||||+.+.++.|++.|++||++||++|++||||||+.|+|+|+++||+++||+||||+|..+.+.|..++
T Consensus         5 ~~~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~GG~~iGv~p~~l~~~e~~~~   84 (216)
T 1ydh_A            5 QRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGIIPKALMPIEISGE   84 (216)
T ss_dssp             CCCSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEEGGGHHHHCCSS
T ss_pred             cCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHHHHHHHHcCCcEEEEechhcCccccccC
Confidence            34567899999999998899999999999999999999999999988999999999999999999999998888898899


Q ss_pred             CCceEeecCCHHHHHHHHHhhcCeEEEecCCcccHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCC
Q 026977           89 TVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIK  168 (230)
Q Consensus        89 ~~~e~i~~~~m~~Rk~~m~~~sDa~I~lPGG~GTL~El~~~~t~~qlg~~~kPivlln~~G~~~~l~~~l~~~~~~gfi~  168 (230)
                      .+++++++++|++||++|+++||+||+||||+|||+|+|++|||.|+++|+|||+++|.+|||+++++|+++|+++|||+
T Consensus        85 ~~~~~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~  164 (216)
T 1ydh_A           85 TVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIK  164 (216)
T ss_dssp             CCSEEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSC
T ss_pred             CCCcccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCcEEEcCCHHHHHHHHHhhcCCCccccccCchhhh
Q 026977          169 PSQRNIIVSAPNAKELVQKLEEYVPVHDGVIAKASWEVD  207 (230)
Q Consensus       169 ~~~~~~i~~~~d~ee~~~~l~~~~~~~~~~~~~~~~~~~  207 (230)
                      +++.+++.+++|++|+++.|+++++.+.+..++++|..+
T Consensus       165 ~~~~~~~~~~d~~ee~~~~l~~~~~~~~~~~~~~~~~~~  203 (216)
T 1ydh_A          165 PGARNIVVSAPTAKELMEKMEEYTPSHMHVASHESWKVE  203 (216)
T ss_dssp             HHHHTTEEEESSHHHHHHHHHHCC---------------
T ss_pred             hHHcCeEEEeCCHHHHHHHHHHhcccccccccccccchh
Confidence            999999999999999999999999888877788899765
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A Back     alignment and structure
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M} Back     alignment and structure
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str} Back     alignment and structure
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1 Back     alignment and structure
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1 Back     alignment and structure
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1 Back     alignment and structure
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A Back     alignment and structure
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1 Back     alignment and structure
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica} Back     alignment and structure
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A Back     alignment and structure
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris} Back     alignment and structure
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB} Back     alignment and structure
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2 Back     alignment and structure
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A* Back     alignment and structure
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A* Back     alignment and structure
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis} Back     alignment and structure
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Back     alignment and structure
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Back     alignment and structure
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A* Back     alignment and structure
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A* Back     alignment and structure
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* Back     alignment and structure
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Back     alignment and structure
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Back     alignment and structure
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A Back     alignment and structure
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Back     alignment and structure
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A* Back     alignment and structure
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* Back     alignment and structure
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 230
d2q4oa1183 c.129.1.1 (A:8-190) Hypothetical protein At2g37210 2e-58
d1ydhb_181 c.129.1.1 (B:) Hypothetical protein At5g11950 {Tha 2e-57
d1t35a_179 c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus 1e-54
d1weka_208 c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA16 5e-39
d1rcua_170 c.129.1.1 (A:) Hypothetical protein TM1055 {Thermo 6e-37
d1weha_171 c.129.1.1 (A:) Hypothetical protein TT1887 (TTHA02 5e-34
d1qhda1213 a.115.1.2 (A:1-148,A:333-397) vp6, the major capsi 1e-04
>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 181 Back     information, alignment and structure
>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]} Length = 179 Back     information, alignment and structure
>d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]} Length = 208 Back     information, alignment and structure
>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} Length = 170 Back     information, alignment and structure
>d1weha_ c.129.1.1 (A:) Hypothetical protein TT1887 (TTHA0294) {Thermus thermophilus [TaxId: 274]} Length = 171 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query230
d1ydhb_181 Hypothetical protein At5g11950 {Thale cress (Arabi 100.0
d2q4oa1183 Hypothetical protein At2g37210/T2N18.3 {Thale cres 100.0
d1t35a_179 Hypothetical protein YvdD {Bacillus subtilis [TaxI 100.0
d1weka_208 Hypothetical protein TT1465 (TTHA1644) {Thermus th 100.0
d1weha_171 Hypothetical protein TT1887 (TTHA0294) {Thermus th 100.0
d1rcua_170 Hypothetical protein TM1055 {Thermotoga maritima [ 100.0
d2nx2a1177 Hypothetical protein YpsA {Bacillus subtilis [TaxI 96.81
d2f62a1152 Nucleoside 2-deoxyribosyltransferase {Trypanosoma 95.1
d1s2da_167 Purine transdeoxyribosylase {Lactobacillus helveti 94.75
d1f8ya_156 Nucleoside 2-deoxyribosyltransferase {Lactobacillu 93.66
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 91.05
d1kyha_275 Hypothetical protein YxkO {Bacillus subtilis [TaxI 86.42
d1rjwa2168 Alcohol dehydrogenase {Bacillus stearothermophilus 85.44
d1f0ka_351 Peptidoglycan biosynthesis glycosyltransferase Mur 84.36
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 82.46
d2bona1295 Lipid kinase YegS {Escherichia coli [TaxId: 562]} 82.22
d1rrva_401 TDP-vancosaminyltransferase GftD {Amycolatopsis or 82.13
>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At5g11950
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.7e-57  Score=379.11  Aligned_cols=180  Identities=68%  Similarity=1.192  Sum_probs=175.7

Q ss_pred             CcceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchHHHHHHHHHhcCCeEEEEeCCcccccccCCCCCc
Q 026977           12 RFKRVCVFCGSSTGKRNCYSDAAIDLAHELVARRLDLVYGGGSIGLMGLVSKAVHHGGGNVIGIIPRTLMNKEITGETVG   91 (230)
Q Consensus        12 ~~~~V~VfggS~~~~~~~~~~~A~~LG~~LA~~g~~lVtGGg~~GlM~ava~gA~~~GG~viGI~P~~~~~~e~~~~~~~   91 (230)
                      ||++|||||||+.++++.|++.|++||+.||++||+||||||+.|+|+|+++||+++||+|+||+|..+.+.|..++.++
T Consensus         1 ~~k~v~Vf~gs~~~~~~~~~~~a~~lg~~La~~g~~lv~GGG~~GlMga~a~ga~~~gg~viGv~~~~l~~~e~~~~~~~   80 (181)
T d1ydhb_           1 RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGIIPKALMPIEISGETVG   80 (181)
T ss_dssp             CCSEEEEECCSCCCSSTHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEEGGGHHHHCCSCCCS
T ss_pred             CCcEEEEEccCCCCcCCHHHHHHHHHHHHHHHCCCeEEECCCchHHHHHHHHhHhhcCCcccccchhhhhhhhcCCcccC
Confidence            68899999999999999999999999999999999999999999999999999999999999999998888888899999


Q ss_pred             eEeecCCHHHHHHHHHhhcCeEEEecCCcccHHHHHHHHHHHHcCCCCCcEEEEecCCcchHHHHHHHHHHHcCCCCccc
Q 026977           92 EVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQ  171 (230)
Q Consensus        92 e~i~~~~m~~Rk~~m~~~sDa~I~lPGG~GTL~El~~~~t~~qlg~~~kPivlln~~G~~~~l~~~l~~~~~~gfi~~~~  171 (230)
                      +++.+++|++||..|++.|||||+||||+|||+|++++|+|.|++.|+||++++|.+|||++|++|+++++++||++++.
T Consensus        81 ~~~~~~~~~~Rk~~m~~~sdafIvlPGG~GTLdEl~e~l~l~ql~~~~kpiiiln~~gfw~~l~~~l~~~~~~g~i~~~~  160 (181)
T d1ydhb_          81 DVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGA  160 (181)
T ss_dssp             EEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHHTSSCHHH
T ss_pred             cceeeccHHHHHHHHHHhCeeEEEeCCccchHHHHHHHHHHHHhcccCCCeEEEecCccHHHHHHHHHHHHHCCCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcEEEcCCHHHHHHHHHhh
Q 026977          172 RNIIVSAPNAKELVQKLEEY  191 (230)
Q Consensus       172 ~~~i~~~~d~ee~~~~l~~~  191 (230)
                      .+.+.++|||+|++++|++|
T Consensus       161 ~~~~~~~d~~ee~~~~l~~~  180 (181)
T d1ydhb_         161 RNIVVSAPTAKELMEKMEEY  180 (181)
T ss_dssp             HTTEEEESSHHHHHHHHHHC
T ss_pred             cCeEEEeCCHHHHHHHHHhh
Confidence            99999999999999999886
>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1weha_ c.129.1.1 (A:) Hypothetical protein TT1887 (TTHA0294) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2nx2a1 c.129.1.2 (A:1-177) Hypothetical protein YpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2f62a1 c.23.14.1 (A:9-160) Nucleoside 2-deoxyribosyltransferase {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1s2da_ c.23.14.1 (A:) Purine transdeoxyribosylase {Lactobacillus helveticus [TaxId: 1587]} Back     information, alignment and structure
>d1f8ya_ c.23.14.1 (A:) Nucleoside 2-deoxyribosyltransferase {Lactobacillus leichmannii [TaxId: 28039]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure