Citrus Sinensis ID: 027012

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MDRYRPNRRVQIEESEPPKYDDVEDEDRDGRDDDDDNSNRLRPSENNVTEDQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASEELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTKSESA
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHcccccEEEEEEEEccccccccEEEEEEEccccEEEEccccccEEEEEEcccccEEEEccccccEEEEEEcccccEEEEcccHHHHHHHHHHHHHcccccEEEEEcccEEEEEccccEEEEEEEEEccccccEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccccccHHHHHHHcccccEEEEEcEEEEcccccccccEEEEEEccEEEEEccccEEEEEEEEHHHEEEEEEccccccEEEEEccccccHHHHcHHHHHHHHHHHHHHHHcccccEEEEccEEEEEEccccEEEEEEEEccccccccEEcccccc
Coil and Loop (DISEMBL)
mdryrpnrrvqieeseppkyddvededrdgrdddddnsnrlrpsennvtedqepfmgikvRRKASLhrdykgdyldvasHPYLMKILQKQGDKQVLFADKILkftgsgkmkrRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASEELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTKSESA
Flexible Loop (DISEMBL)
mdryrpnrrvqieeseppkyddvededrdgrdddddnsnrlrpsennvtedqepfmgIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILkftgsgkmkrriLLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASEELEVAFSNSFEYHAAAELVKEVVFEeveggiktriltksesa
Low Complexity Region (SEG)
MDRYRPNRRVQIEESEPPKYddvededrdgrdddddNSNRLRPSENNVTEDQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASEELEVAFSNSFEYHaaaelvkevvfeeveGGIKTRILTKSESA
Disordered region (IsUnstruct)
*********************************************************IKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASEELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRIL******
Disordered Region (DISOPRED)
*DRY**NRRVQIEESEPPK**********************************PFMGIKVRRKASLHRDYKGDYLDVA****************VLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASEELEVAFSNSFEYHAAAE*************************
Disordered Region (DISEMBL)
*************************************SNRLRPSENNVTEDQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASEELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTKSESA
Disordered Region (DISPRO)
****RPNRRVQIEESEPPKYDD********R*******NRLRPSENNVTEDQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASEELEVAFSNSFEYHAAAELVKEVVFEEVEGGIK**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDRYRPNRRVQIEESEPPKYDDVEDEDRDGRDDDDDNSNRLRPSENNVTEDQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASEELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTKSESA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	229	2.2.26 [Sep-21-2011]
P34109	1109	Myosin ID heavy chain OS=	no	no	0.593	0.122	0.311	3e-15
P19706	1147	Myosin heavy chain IB OS=	N/A	no	0.746	0.149	0.303	5e-14
P42522	1182	Myosin IC heavy chain OS=	no	no	0.641	0.124	0.320	5e-13
P34092	1111	Myosin IB heavy chain OS=	no	no	0.681	0.140	0.315	1e-12
P10569	1168	Myosin IC heavy chain OS=	N/A	no	0.585	0.114	0.333	2e-12
Q12965	1108	Unconventional myosin-Ie	yes	no	0.598	0.123	0.309	4e-11
Q63356	1107	Unconventional myosin-Ie	yes	no	0.598	0.123	0.309	7e-11
E9Q634	1107	Unconventional myosin-Ie	yes	no	0.598	0.123	0.309	2e-10
P22467	994	Myosin IA heavy chain OS=	no	no	0.567	0.130	0.297	6e-10
O00160	1098	Unconventional myosin-If	no	no	0.689	0.143	0.285	3e-09

>sp|P34109|MYOD_DICDI Myosin ID heavy chain OS=Dictyostelium discoideum GN=myoD PE=1 SV=2

 Score = 82.0 bits (201), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 15/151 (9%)

Query: 59  KVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLIT 118
           K RR+ S+ R Y+GDY++   +  L  I++K G+++++F   + K+    + +RR+LL++
Sbjct: 725 KERRRLSIERPYQGDYINYRENFELKDIVKKNGNEKIMFTHAVNKYDRRSRCQRRVLLLS 784

Query: 119 DFAIYLVDPETD-------------ALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLL 165
           D AIY +  E +               KRR+ LA +  + LS+LSD F  +   +E+D +
Sbjct: 785 DTAIYFIATEKNKDKEDRKKRPWIYVQKRRLLLAGITSVELSKLSDGFVVLKTMNEHDQI 844

Query: 166 MASTRKTEIVTVLVEATKGASEELEVAFSNS 196
               RKTE +  L++A K  +  L + ++NS
Sbjct: 845 FECRRKTEFLGTLIKAYKTGT--LRINYNNS 873

Myosin is a protein that binds to actin and has ATPase activity that is activated by actin. Myosin id may have a role in chemotaxis and aggregation; it could serve to stabilize and even retract cortical structures, such as pseudopods and lamellopods. Involved in the process of phagocytosis.
Dictyostelium discoideum (taxid: 44689)

>sp|P19706|MYSB_ACACA Myosin heavy chain IB OS=Acanthamoeba castellanii GN=MIB PE=1 SV=2

 Score = 78.2 bits (191), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 10/181 (5%)

Query: 57  GIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQG-DKQVL-FADKILKFTGSGKMKRRI 114
           G K R++ S++R Y+ DY++  ++  L   ++  G DK+   F D++L     GK +RR 
Sbjct: 713 GKKERQRHSVNRKYEFDYINYDANYPLQDCVRSSGRDKEATAFTDQVLVLNRRGKPERRD 772

Query: 115 LLITDFAIYLVDPETDA------LKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMAS 168
           L++T+ A+Y    +  +      LKRRI L  +  + LS L DN+  +I  ++YD++  +
Sbjct: 773 LIVTNEAVYFAMRKKKSGQVVYNLKRRIPLGEIASLSLSTLQDNY-VVIHHNQYDMVFEN 831

Query: 169 TRKTEIVTVLVEATK-GASEELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTKSE 227
            +KTEIVT+L+E  K     +L V F+++  Y A+    + + F + E       + KS 
Sbjct: 832 DKKTEIVTILMENYKMSGGRDLPVNFNDNITYKASNGAQRRLTFSKNESASAQPSIKKSR 891

Query: 228 S 228
           +
Sbjct: 892 A 892

Myosin is a protein that binds to F-actin and has ATPase activity that is activated by F-actin.

Acanthamoeba castellanii (taxid: 5755)

>sp|P42522|MYOC_DICDI Myosin IC heavy chain OS=Dictyostelium discoideum GN=myoC PE=4 SV=2

 Score = 74.7 bits (182), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 15/162 (9%)

Query: 50  EDQEPFMGIKVRRKASL--HRDYKGDYLDVASHPYLMKILQKQGDKQVLFADK----ILK 103
           ++++ F G K R + S+   R Y GDYLDV S  Y +  + +  ++ V+F+ K    +  
Sbjct: 763 QNEQLFQGRKERNRFSMISVRKYFGDYLDVRSQSYFLDAMAEGRNEDVIFSSKSQVMVHP 822

Query: 104 FTGSGKMKRRILLITDFAIYLV------DPETDALKRRIALAAVEKMCLSELSDNFFAII 157
              + K+  R L++T  AIYL+      +  T  L RR+ LA V    LS L+DN   I 
Sbjct: 823 ILSANKLSPRFLIVTKQAIYLIKLKQKKNLATYLLDRRVPLAEVTSFSLSSLADNLLVIH 882

Query: 158 IPSEYDLLMASTRKTEIVTVLVEATKGASEELEVAFSNSFEY 199
             +++D+ + +  KTE+V  L+   KG +  L V F  S +Y
Sbjct: 883 TSTQFDVAVTTEFKTELVA-LINKQKGTT--LAVNFGQSIQY 921

Myosin is a protein that binds to actin and has ATPase activity that is activated by actin. Involved in the process of phagocytosis and appears to support streaming behavior.

Dictyostelium discoideum (taxid: 44689)

>sp|P34092|MYOB_DICDI Myosin IB heavy chain OS=Dictyostelium discoideum GN=myoB PE=1 SV=2

 Score = 73.6 bits (179), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 9/165 (5%)

Query: 59  KVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQ-VLFADKILKFTGSGKMKRRILLI 117
           K R++ S+ R +  DY+D  +   L + +Q    K+ V+FAD ++K     K K   +++
Sbjct: 729 KERQRNSIDRKFTSDYIDFENQFGLQEAMQNAHKKERVVFADTVIKIDRRAKQKNYEMVL 788

Query: 118 TDFAIYLVDPE------TDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRK 171
           TD A+Y V+           L RR+ L  ++ + +S LSDN     +P E+D ++ + +K
Sbjct: 789 TDQALYFVEKSIKKKVLVHTLIRRVGLREIKGVSISTLSDNVIVFHLP-EHDQVIENDKK 847

Query: 172 TEIVTVLVEATKG-ASEELEVAFSNSFEYHAAAELVKEVVFEEVE 215
           TEI+ VLVE  K      L V FS+   Y       KE+ F++ E
Sbjct: 848 TEIIIVLVEYFKAIGGGSLNVQFSDRINYTLKKGEQKEISFQKSE 892

Myosin is a protein that binds to actin and has ATPase activity that is activated by actin. Myosin IB may have a role in chemotaxis and aggregation; it could serve to stabilize and even retract cortical structures, such as pseudopods and lamellopods. Involved in the whole cell motility of aggregation-stages cells. Overexpression results in significant decrease in the rate of cellular translocation and fluid-phase pinocytosis and abnormalities in the normal rearrangement of the actin cytoskeleton.

Dictyostelium discoideum (taxid: 44689)

>sp|P10569|MYSC_ACACA Myosin IC heavy chain OS=Acanthamoeba castellanii GN=MIC PE=1 SV=1

 Score = 72.8 bits (177), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 22/156 (14%)

Query: 59  KVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKI----LKFTGSGKMKRRI 114
           K RR+ SL R +K DY++   +  L   +  +G ++VLFAD        F GS K++RRI
Sbjct: 704 KERRRLSLERPFKTDYINYRQNFKLKDCIGDKGTEKVLFADLCNNLDKSFWGS-KVERRI 762

Query: 115 LLITDFAIYLV--DPETD-----------ALKRRIALAAVEKMCLSELSDNFFAIIIPSE 161
           +++T  A++LV  DP  D            LKRRI    +  + LS L DNF  I +  E
Sbjct: 763 MVLTSNAMFLVAIDPNKDKIEKKVKPFLYVLKRRIDFNKIGSITLSPLQDNFMLISVNGE 822

Query: 162 YDLLMASTRKTEIVTVLVEATKGASEELEVAFSNSF 197
           +  L+   RKTE++ VL++     +  + + F+++F
Sbjct: 823 HSNLLECRRKTELIGVLLK----HNPSVRIQFADTF 854

Myosin is a protein that binds to F-actin and has ATPase activity that is activated by F-actin.

Acanthamoeba castellanii (taxid: 5755)

>sp|Q12965|MYO1E_HUMAN Unconventional myosin-Ie OS=Homo sapiens GN=MYO1E PE=1 SV=2

 Score = 68.6 bits (166), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 85/152 (55%), Gaps = 15/152 (9%)

Query: 59  KVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLIT 118
           K RR+ S++R++ GDY+ +  HP L + + K+  +++ FAD + K+    K  +R LL+T
Sbjct: 730 KERRRNSINRNFIGDYIGMEEHPELQQFVGKR--EKIDFADTVTKYDRRFKGVKRDLLLT 787

Query: 119 DFAIYLVDPE-----------TDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA 167
              +YL+  E            + LKR+I +  +  + LS + D+ F I+   EYD L+ 
Sbjct: 788 PKCLYLIGREKVKQGPDKGLVKEVLKRKIEIERILSVSLSTMQDDIF-ILHEQEYDSLLE 846

Query: 168 STRKTEIVTVLVEATKGASE-ELEVAFSNSFE 198
           S  KTE +++L +  +  ++ +L + FSN+ E
Sbjct: 847 SVFKTEFLSLLAKRYEEKTQKQLPLKFSNTLE 878

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails bind to membranous compartments, which are then moved relative to actin filaments. Binds to membranes containing anionic phospholipids via its tail domain. Required for normal morphology of the glomerular basement membrane, normal development of foot processes by kidney podocytes and normal kidney function. In dendritic cells, may control the movement of class II-containing cytoplasmic vesicles along the actin cytoskeleton by connecting them with the actin network via C11orf46/ ARF7EP and ARL14.

Homo sapiens (taxid: 9606)

>sp|Q63356|MYO1E_RAT Unconventional myosin-Ie OS=Rattus norvegicus GN=Myo1e PE=1 SV=1

 Score = 67.8 bits (164), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 85/152 (55%), Gaps = 15/152 (9%)

Query: 59  KVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLIT 118
           K RR+ S++R++ GDY+ +  HP L + + K+  +++ FAD + K+    K  +R LL+T
Sbjct: 730 KERRRNSINRNFIGDYIGMEEHPELQQFVGKR--EKIDFADIVTKYDRRFKGVKRDLLLT 787

Query: 119 DFAIYLVDPE-----------TDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA 167
              +YL+  E            + LKR+I +  +  + LS + D+ F I+   EYD L+ 
Sbjct: 788 PKCLYLIGREKVKQGPDKGLVKEVLKRKIEVERILSVSLSTMQDDIF-ILHEQEYDSLLE 846

Query: 168 STRKTEIVTVLVEATKGASE-ELEVAFSNSFE 198
           S  KTE +++L +  +  ++ +L + FSN+ E
Sbjct: 847 SVFKTEFLSLLTKRYEEKTQKQLPLKFSNTLE 878

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails bind to membranous compartments, which are then moved relative to actin filaments. Binds to membranes containing anionic phospholipids via its tail domain. Required for normal morphology of the glomerular basement membrane, normal development of foot processes by kidney podocytes and normal kidney function (By similarity). In dendritic cells, may control the movement of class II-containing cytoplasmic vesicles along the actin cytoskeleton by connecting them with the actin network via C11orf46/ ARF7EP and ARL14.

Rattus norvegicus (taxid: 10116)

>sp|E9Q634|MYO1E_MOUSE Unconventional myosin-Ie OS=Mus musculus GN=Myo1e PE=1 SV=1

 Score = 66.2 bits (160), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 84/152 (55%), Gaps = 15/152 (9%)

Query: 59  KVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLIT 118
           K RR+ S++R++ GDY+ +   P L + + K+  +++ FAD + K+    K  +R LL+T
Sbjct: 730 KERRRNSINRNFIGDYIGMEERPELQQFVGKR--EKIDFADTVTKYDRRFKGVKRDLLLT 787

Query: 119 DFAIYLVDPE-----------TDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA 167
              +YL+  E            + LKRRI +  +  + LS + D+ F I+   EYD L+ 
Sbjct: 788 PKCLYLIGREKVKQGPDKGVVKEVLKRRIEVERILSVSLSTMQDDIF-ILHEQEYDSLLE 846

Query: 168 STRKTEIVTVLVEATKGASE-ELEVAFSNSFE 198
           S  KTE +++L +  +  ++ +L + FSN+ E
Sbjct: 847 SVFKTEFLSLLAKRYEEKTQKQLPLKFSNTLE 878

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails bind to membranous compartments, which are then moved relative to actin filaments. Binds to membranes containing anionic phospholipids via its tail domain (By similarity). Required for normal morphology of the glomerular basement membrane, normal development of foot processes by kidney podocytes and normal kidney function. In dendritic cells, may control the movement of class II-containing cytoplasmic vesicles along the actin cytoskeleton by connecting them with the actin network via C11orf46/ ARF7EP and ARL14.

Mus musculus (taxid: 10090)

>sp|P22467|MYOA_DICDI Myosin IA heavy chain OS=Dictyostelium discoideum GN=myoA PE=4 SV=2

 Score = 64.7 bits (156), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 79/141 (56%), Gaps = 11/141 (7%)

Query: 70  YKGDYLDVASHPYLMKILQKQ-GDKQVL-FADKILKFTGSGKMKRRILLITDFAIYLVDP 127
           + GD+L +    Y    L+++ G   VL  +  + K +   K+++R LL+T+  I+ + P
Sbjct: 794 FIGDFLSLTRDNYTTATLKREEGPNAVLQLSLNVSKVSRHHKIQKRSLLVTNETIFTITP 853

Query: 128 ETD-------ALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVL-- 178
                     A+KR++  +A+EK+  S+LSD+FF I I +E+DL + + +KT ++T+L  
Sbjct: 854 HKPKKDGSWFAIKRKVPFSAIEKISFSKLSDDFFVIHIINEHDLCLETNKKTVLITLLSN 913

Query: 179 VEATKGASEELEVAFSNSFEY 199
           + +     +EL   F +S +Y
Sbjct: 914 LYSKHLNGKELVFEFKDSIQY 934

Actin-based motor protein, possibly involved in a wide range of motile processes, such as cell movement across a surface, and extension and retraction of pseudopodia or lamellipodia.

Dictyostelium discoideum (taxid: 44689)

>sp|O00160|MYO1F_HUMAN Unconventional myosin-If OS=Homo sapiens GN=MYO1F PE=1 SV=3

 Score = 62.0 bits (149), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 24/182 (13%)

Query: 59  KVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLIT 118
           K RR+ S++R++ GDYL +   P L + L K+  ++V FAD + K+    K  +R L++T
Sbjct: 728 KERRRNSINRNFVGDYLGLEERPELRQFLGKR--ERVDFADSVTKYDRRFKPIKRDLILT 785

Query: 119 DFAIYLVDPE-----------TDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA 167
              +Y++  E            + LK+++ + A+  + LS   D+FF I+     D  + 
Sbjct: 786 PKCVYVIGREKVKKGPEKGQVCEVLKKKVDIQALRGVSLSTRQDDFF-ILQEDAADSFLE 844

Query: 168 STRKTEIVTVLVEATKGASEE-LEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTKS 226
           S  KTE V++L +  + A+   L + FS++ ++          V +E  GG  TR +T S
Sbjct: 845 SVFKTEFVSLLCKRFEEATRRPLPLTFSDTLQFR---------VKKEGWGGGGTRSVTFS 895

Query: 227 ES 228
             
Sbjct: 896 RG 897

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
255545078	226	conserved hypothetical protein [Ricinus	0.982	0.995	0.765	3e-93
225462707	233	PREDICTED: myosin IB heavy chain [Vitis	0.965	0.948	0.761	2e-89
224116830	221	predicted protein [Populus trichocarpa]	0.951	0.986	0.738	9e-86
356546318	214	PREDICTED: myosin ID heavy chain-like [G	0.912	0.976	0.728	6e-85
449456363	225	PREDICTED: myosin heavy chain IB-like [C	0.965	0.982	0.714	3e-83
224120580	171	predicted protein [Populus trichocarpa]	0.742	0.994	0.853	4e-77
297792701	213	hypothetical protein ARALYDRAFT_918408 [	0.921	0.990	0.625	2e-70
18423496	210	myosin heavy chain-related protein [Arab	0.847	0.923	0.632	1e-67
9759178	204	unnamed protein product [Arabidopsis tha	0.807	0.906	0.635	3e-64
346465271	166	hypothetical protein [Amblyomma maculatu	0.720	0.993	0.728	1e-63

>gi|255545078|ref|XP_002513600.1| conserved hypothetical protein [Ricinus communis] gi|223547508|gb|EEF49003.1| conserved hypothetical protein [Ricinus communis]

 Score =  347 bits (889), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 173/226 (76%), Positives = 193/226 (85%), Gaps = 1/226 (0%)

Query: 1   MDRYRPNRRVQIEESEPPKYDDVEDEDRDGRDDDDDNSNRLRPSENNVTEDQEPFMGIKV 60
           M +Y+ NRRVQI+ S  P YDD +D      D+ ++   RLRPS +NV+EDQEPFMG+KV
Sbjct: 1   MIKYKSNRRVQIDASNLPDYDDEKDAGGQNNDNGEEKRLRLRPSGSNVSEDQEPFMGVKV 60

Query: 61  RRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDF 120
           RRKASLHRD KGDYLDV SH YLMKILQKQGD QVLFADK+LKFT SGKMKRRILLITDF
Sbjct: 61  RRKASLHRDIKGDYLDVPSHSYLMKILQKQGDSQVLFADKVLKFTSSGKMKRRILLITDF 120

Query: 121 AIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVE 180
           AIY+VDP TDALKRRIALAAVEKM LSELSDNFFA+I+P+EYDLL+ASTRKTEIVTVL+E
Sbjct: 121 AIYIVDPATDALKRRIALAAVEKMLLSELSDNFFAVIVPTEYDLLLASTRKTEIVTVLIE 180

Query: 181 ATKGASE-ELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTK 225
           ATK AS  EL+V FSNSFEY A+AELVKEV FEEVEGG+KTRI  K
Sbjct: 181 ATKTASNYELDVIFSNSFEYRASAELVKEVQFEEVEGGVKTRIARK 226

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462707|ref|XP_002267282.1| PREDICTED: myosin IB heavy chain [Vitis vinifera] gi|302143695|emb|CBI22556.3| unnamed protein product [Vitis vinifera]

 Score =  333 bits (855), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 172/226 (76%), Positives = 196/226 (86%), Gaps = 5/226 (2%)

Query: 1   MDRYRPNRRVQIEESEPPKYDDVEDEDRDGRDDDDDNSNRLRPSENNVTEDQEPFMGIKV 60
           M+R R +RRVQIE+S+P +YDD +DE+          S +LRPSE NVTEDQEPFMG+KV
Sbjct: 12  MERLRSHRRVQIEDSKPTRYDDDDDEEEPS----SRGSIKLRPSEKNVTEDQEPFMGVKV 67

Query: 61  RRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDF 120
           RR+ASLHRDYKGDYLDV S P+LMK+L KQGD+QVLFADK LKFTGSGKMKRR LLITDF
Sbjct: 68  RRRASLHRDYKGDYLDVPSQPFLMKLLGKQGDRQVLFADKALKFTGSGKMKRRTLLITDF 127

Query: 121 AIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVE 180
           AIY++D ETD LKRRI+LAAVEK+CLSELSDNFFAIIIP+EYDLLMASTRKTEIVTVLV+
Sbjct: 128 AIYIIDSETDMLKRRISLAAVEKICLSELSDNFFAIIIPTEYDLLMASTRKTEIVTVLVD 187

Query: 181 ATKGASE-ELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTK 225
           ATK  S+ ELEV FSN FEY+AA++LVKEV FEEVEGG+KTRIL K
Sbjct: 188 ATKNMSDYELEVVFSNRFEYNAASDLVKEVQFEEVEGGVKTRILRK 233

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116830|ref|XP_002331824.1| predicted protein [Populus trichocarpa] gi|222875062|gb|EEF12193.1| predicted protein [Populus trichocarpa]

 Score =  322 bits (824), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 164/222 (73%), Positives = 185/222 (83%), Gaps = 4/222 (1%)

Query: 5   RPNRRVQIEESEPPKYDDVEDEDRDGRDDDDDNSNRLRPSENNVTEDQEPFMGIKVRRKA 64
           R NRRVQI + + PKYDD E+E   G   D++   RL  + +NV++DQEP MG+KV R+A
Sbjct: 3   RFNRRVQIPDLQLPKYDDAEEE---GDYSDNNGVARLTTTGSNVSDDQEPVMGVKVLRQA 59

Query: 65  SLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFAIYL 124
           S HRD KGDYLDV SH YLMKI QKQGDKQVLFADK+LKFT SGKMK RILLITDFA+Y+
Sbjct: 60  SRHRDIKGDYLDVPSHSYLMKIFQKQGDKQVLFADKVLKFTASGKMKHRILLITDFALYI 119

Query: 125 VDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKG 184
           +DPET+ALKRRIALAAVEK CLS+LSDNF AIIIP EYDLLMASTRKTEIV VLVEATK 
Sbjct: 120 IDPETNALKRRIALAAVEKTCLSDLSDNFLAIIIPKEYDLLMASTRKTEIVAVLVEATKS 179

Query: 185 ASE-ELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTK 225
           AS+ ELEV FSNSFEY+A AELVKE+ FEEVEGG+KTRI  K
Sbjct: 180 ASDFELEVVFSNSFEYNADAELVKEIQFEEVEGGVKTRITRK 221

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546318|ref|XP_003541574.1| PREDICTED: myosin ID heavy chain-like [Glycine max]

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 161/221 (72%), Positives = 188/221 (85%), Gaps = 12/221 (5%)

Query: 8   RRVQIEESEPPKYDDVEDEDRDGRDDDDDNSNRLRPSENNVTEDQEPFMGIKVRRKASLH 67
           RRVQIE+   PKYDDV D D      + + + R + S +NV++DQEPFMGIKVRRKASLH
Sbjct: 3   RRVQIED---PKYDDVPDAD------EPEETIRFKSSNSNVSDDQEPFMGIKVRRKASLH 53

Query: 68  RDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDP 127
           RD+KGDYL+V SHP+L+KILQKQGD +VLFAD++LKFTGSGKMKR +L+ITD AIY+VDP
Sbjct: 54  RDHKGDYLNVPSHPFLIKILQKQGDNEVLFADRVLKFTGSGKMKRCVLMITDSAIYIVDP 113

Query: 128 ETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASE 187
           E DALKRRI LAAVE++CLSELSDNFFA+I+PSEYDLLMASTRKTEIVTVLVEATK  S 
Sbjct: 114 EVDALKRRIVLAAVERVCLSELSDNFFAVIVPSEYDLLMASTRKTEIVTVLVEATKAKSA 173

Query: 188 ---ELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTK 225
              EL+V FSN FEY+AA++LVKEV FEEVEGG+KTRIL K
Sbjct: 174 TGFELDVVFSNRFEYNAASDLVKEVQFEEVEGGVKTRILRK 214

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456363|ref|XP_004145919.1| PREDICTED: myosin heavy chain IB-like [Cucumis sativus] gi|449497302|ref|XP_004160366.1| PREDICTED: myosin heavy chain IB-like [Cucumis sativus]

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 160/224 (71%), Positives = 184/224 (82%), Gaps = 3/224 (1%)

Query: 5   RPNRRVQIEESEPPKYDDVEDEDRDGRDDDDDNSNRLRPSENNVTEDQEPFMGIKVRRKA 64
           R  RRV I++  P     VE     G  DDD    + RPS+ NVTEDQEPFMGIKVRRKA
Sbjct: 4   RSRRRVLIDDRSPAS-GAVERPVVAG-PDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRKA 61

Query: 65  SLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFAIYL 124
           SLHRDYKGDY+DV S+ YLMKILQKQG++ VLFADK+LKFT SGKMKRRILLIT+FAIY+
Sbjct: 62  SLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIYI 121

Query: 125 VDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKG 184
           +DPETD LKRRIALAAV+K+CLSELSDNFF I+IP+EYD+LMASTRKTEIVTVLVEA K 
Sbjct: 122 IDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFKS 181

Query: 185 ASE-ELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTKSE 227
           +S+ ELEV FSN F Y+A  E++KE+ FEEVEGG+KTRIL K E
Sbjct: 182 SSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE 225

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120580|ref|XP_002318365.1| predicted protein [Populus trichocarpa] gi|222859038|gb|EEE96585.1| predicted protein [Populus trichocarpa]

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 146/171 (85%), Positives = 159/171 (92%), Gaps = 1/171 (0%)

Query: 56  MGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRIL 115
           MG+KVRRKAS HRD KGDYLDV SH YLMKILQKQGDKQVLFADK+LKFTGSGKMK+RIL
Sbjct: 1   MGVKVRRKASRHRDIKGDYLDVPSHSYLMKILQKQGDKQVLFADKVLKFTGSGKMKQRIL 60

Query: 116 LITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIV 175
           LITDFAIY++DPE +ALKRRIALAAVEK+CLSELSDNFFAIIIP+EYDLLMASTRKTEIV
Sbjct: 61  LITDFAIYIIDPEINALKRRIALAAVEKICLSELSDNFFAIIIPTEYDLLMASTRKTEIV 120

Query: 176 TVLVEATKGASE-ELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTK 225
           TVLVEAT+ AS+ ELEVAFSNSFEY+A AELVK + FEEVEGG+KTRI  K
Sbjct: 121 TVLVEATRSASDYELEVAFSNSFEYNADAELVKVIEFEEVEGGVKTRITRK 171

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792701|ref|XP_002864235.1| hypothetical protein ARALYDRAFT_918408 [Arabidopsis lyrata subsp. lyrata] gi|297310070|gb|EFH40494.1| hypothetical protein ARALYDRAFT_918408 [Arabidopsis lyrata subsp. lyrata]

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 142/227 (62%), Positives = 171/227 (75%), Gaps = 16/227 (7%)

Query: 1   MDRYRPNRRVQIEESEPPKYD-DVEDEDRDGRDDDDDNSNRLRPSENNVTEDQEPFMGIK 59
           MDR++  R  + +  E P+ D D  DEDR   + D                DQ PF G K
Sbjct: 1   MDRFKEQRGPKFDGDESPRPDFDGGDEDRSVGEVDGG--------------DQTPFAGGK 46

Query: 60  VRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITD 119
           VRRKAS +R+++GDYL V+S P LM+IL+KQGD  +LFADK+LKFTGSGKMKRRI ++TD
Sbjct: 47  VRRKASRYREHRGDYLHVSSRPGLMRILEKQGDTSILFADKVLKFTGSGKMKRRIFILTD 106

Query: 120 FAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLV 179
           FAIYL+DPET+A+ RRIALAAVEKMCLS+LSDNFFAIIIP+EYDL MASTRKTE+V V+V
Sbjct: 107 FAIYLIDPETEAMTRRIALAAVEKMCLSKLSDNFFAIIIPTEYDLFMASTRKTELVQVMV 166

Query: 180 EATKGASE-ELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTK 225
           + TK AS+ ELEV  SN FEY+A+A LVKEV FEE EGGIKT+ L K
Sbjct: 167 DVTKSASDYELEVLLSNRFEYNASASLVKEVSFEESEGGIKTKFLWK 213

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18423496|ref|NP_568789.1| myosin heavy chain-related protein [Arabidopsis thaliana] gi|13605555|gb|AAK32771.1|AF361603_1 AT5g53310/K19E1_11 [Arabidopsis thaliana] gi|18491143|gb|AAL69540.1| AT5g53310/K19E1_11 [Arabidopsis thaliana] gi|332008955|gb|AED96338.1| myosin heavy chain-related protein [Arabidopsis thaliana]

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 136/215 (63%), Positives = 165/215 (76%), Gaps = 21/215 (9%)

Query: 13  EESEPPKYDDVEDEDRD-GRDDDDDNSNRLRPSENNVTEDQEPFMGIKVRRKASLHRDYK 71
           EES PP +D    EDR  G  D  D++               PF G KVRRKAS +R+++
Sbjct: 15  EESPPPDFD----EDRSVGEVDGGDHT---------------PFAGGKVRRKASRYREHR 55

Query: 72  GDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDA 131
           GDYL V+S P LM+IL+KQGD  +LFADK+LKFTGSGKMKRRI ++TDFAIYL+DPET+A
Sbjct: 56  GDYLHVSSRPGLMRILEKQGDTSILFADKVLKFTGSGKMKRRIFILTDFAIYLIDPETEA 115

Query: 132 LKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASE-ELE 190
           + RRIAL++VEKMCLS+LSDNFFAIIIP+EYDL MASTRKTE+V V+V+ TK AS+ ELE
Sbjct: 116 MTRRIALSSVEKMCLSKLSDNFFAIIIPTEYDLFMASTRKTELVQVMVDVTKSASDYELE 175

Query: 191 VAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTK 225
           V  SN FEY+A+A LVKEV FEE EGGIKT+ + K
Sbjct: 176 VLLSNRFEYNASASLVKEVSFEESEGGIKTKFVWK 210

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9759178|dbj|BAB09793.1| unnamed protein product [Arabidopsis thaliana]

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 131/206 (63%), Positives = 158/206 (76%), Gaps = 21/206 (10%)

Query: 13  EESEPPKYDDVEDEDRD-GRDDDDDNSNRLRPSENNVTEDQEPFMGIKVRRKASLHRDYK 71
           EES PP +D    EDR  G  D  D++               PF G KVRRKAS +R+++
Sbjct: 15  EESPPPDFD----EDRSVGEVDGGDHT---------------PFAGGKVRRKASRYREHR 55

Query: 72  GDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDA 131
           GDYL V+S P LM+IL+KQGD  +LFADK+LKFTGSGKMKRRI ++TDFAIYL+DPET+A
Sbjct: 56  GDYLHVSSRPGLMRILEKQGDTSILFADKVLKFTGSGKMKRRIFILTDFAIYLIDPETEA 115

Query: 132 LKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASE-ELE 190
           + RRIAL++VEKMCLS+LSDNFFAIIIP+EYDL MASTRKTE+V V+V+ TK AS+ ELE
Sbjct: 116 MTRRIALSSVEKMCLSKLSDNFFAIIIPTEYDLFMASTRKTELVQVMVDVTKSASDYELE 175

Query: 191 VAFSNSFEYHAAAELVKEVVFEEVEG 216
           V  SN FEY+A+A LVKEV FEE EG
Sbjct: 176 VLLSNRFEYNASASLVKEVSFEESEG 201

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|346465271|gb|AEO32480.1| hypothetical protein [Amblyomma maculatum]

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 121/166 (72%), Positives = 145/166 (87%), Gaps = 1/166 (0%)

Query: 56  MGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRIL 115
           MG+KVRR+AS+ ++ +GDY+ V+S PYL KIL KQGD  VLFAD +LKFTGSGKMKRRIL
Sbjct: 1   MGMKVRRRASILKECRGDYIGVSSDPYLTKILSKQGDNTVLFADTVLKFTGSGKMKRRIL 60

Query: 116 LITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIV 175
           LITDFAIYLVDP+ D+LKRRIALAAV+K+C+SELSDNFFAIIIP+EYD LMASTRK EIV
Sbjct: 61  LITDFAIYLVDPDADSLKRRIALAAVDKLCMSELSDNFFAIIIPTEYDCLMASTRKAEIV 120

Query: 176 TVLVEATKGASE-ELEVAFSNSFEYHAAAELVKEVVFEEVEGGIKT 220
           +V++EATK  SE ELEV  SN FEY+ AA++VKE+ FEEV+G I+T
Sbjct: 121 SVILEATKSTSEYELEVISSNRFEYNPAADMVKEIHFEEVDGSIRT 166

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
TAIR|locus:2154217	210	AT5G53310 [Arabidopsis thalian	0.764	0.833	0.647	2e-56
DICTYBASE|DDB_G0268062	586	DDB_G0268062 [Dictyostelium di	0.572	0.223	0.416	2.5e-22
DICTYBASE|DDB_G0275447	1109	myoD "myosin ID heavy chain" [	0.593	0.122	0.311	3.2e-14
DICTYBASE|DDB_G0289117	1111	myoB "myosin IB" [Dictyosteliu	0.628	0.129	0.320	3.7e-13
DICTYBASE|DDB_G0276617	1182	myoC "myosin IC" [Dictyosteliu	0.641	0.124	0.320	4e-13
UNIPROTKB|F1S057	1108	MYO1E "Uncharacterized protein	0.637	0.131	0.304	7.7e-13
UNIPROTKB|F1MQ65	1108	MYO1E "Uncharacterized protein	0.598	0.123	0.315	9.9e-13
ZFIN|ZDB-GENE-081104-506	1096	myo1f "myosin IF" [Danio rerio	0.606	0.126	0.318	1.6e-12
UNIPROTKB|F1P7L9	1108	MYO1E "Uncharacterized protein	0.637	0.131	0.298	2.6e-12
UNIPROTKB|Q12965	1108	MYO1E "Unconventional myosin-I	0.637	0.131	0.298	2.6e-12

TAIR|locus:2154217 AT5G53310 [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 114/176 (64%), Positives = 139/176 (78%)

Query:    51 DQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKM 110
             D  PF G KVRRKAS +R+++GDYL V+S P LM+IL+KQGD  +LFADK+LKFTGSGKM
Sbjct:    35 DHTPFAGGKVRRKASRYREHRGDYLHVSSRPGLMRILEKQGDTSILFADKVLKFTGSGKM 94

Query:   111 KRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTR 170
             KRRI ++TDFAIYL+DPET+A+ RRIAL++VEKMCLS+LSDNFFAIIIP+EYDL MASTR
Sbjct:    95 KRRIFILTDFAIYLIDPETEAMTRRIALSSVEKMCLSKLSDNFFAIIIPTEYDLFMASTR 154

Query:   171 KTEIVTVLVEATKGASE-ELEVAFSNSFEYHXXXXXXXXXXXXXXXGGIKTRILTK 225
             KTE+V V+V+ TK AS+ ELEV  SN FEY+               GGIKT+ + K
Sbjct:   155 KTELVQVMVDVTKSASDYELEVLLSNRFEYNASASLVKEVSFEESEGGIKTKFVWK 210

GO:0003774 "motor activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

DICTYBASE|DDB_G0268062 DDB_G0268062 [Dictyostelium discoideum (taxid:44689)]

 Score = 267 (99.0 bits), Expect = 2.5e-22, P = 2.5e-22
 Identities = 55/132 (41%), Positives = 84/132 (63%)

Query:    50 EDQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGK 109
             ED   FMG K RR +S+ + + GD+L ++S+  ++K++ K GD  + F+D ++K     K
Sbjct:   194 EDSR-FMGKKKRRNSSVSKVFLGDFLRLSSNVSILKMISKYGDNTIHFSDVLIKINKRNK 252

Query:   110 MKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMAST 169
              + RI+++TD +IY VDP    LKRRI+L  V  + +S + DNF  I + SEYD ++   
Sbjct:   253 TQERIIIVTDKSIYNVDPNDYKLKRRISLENVTSLSMSTMEDNFIVIHVNSEYDYVLVGG 312

Query:   170 RKTEIVTVLVEA 181
             RK EI TVL+EA
Sbjct:   313 RKIEIATVLLEA 324

GO:0016459 "myosin complex" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

DICTYBASE|DDB_G0275447 myoD "myosin ID heavy chain" [Dictyostelium discoideum (taxid:44689)]

 Score = 196 (74.1 bits), Expect = 3.2e-14, P = 3.2e-14
 Identities = 47/151 (31%), Positives = 84/151 (55%)

Query:    59 KVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLIT 118
             K RR+ S+ R Y+GDY++   +  L  I++K G+++++F   + K+    + +RR+LL++
Sbjct:   725 KERRRLSIERPYQGDYINYRENFELKDIVKKNGNEKIMFTHAVNKYDRRSRCQRRVLLLS 784

Query:   119 DFAIYLVDPETD-------------ALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLL 165
             D AIY +  E +               KRR+ LA +  + LS+LSD F  +   +E+D +
Sbjct:   785 DTAIYFIATEKNKDKEDRKKRPWIYVQKRRLLLAGITSVELSKLSDGFVVLKTMNEHDQI 844

Query:   166 MASTRKTEIVTVLVEATKGASEELEVAFSNS 196
                 RKTE +  L++A K  +  L + ++NS
Sbjct:   845 FECRRKTEFLGTLIKAYKTGT--LRINYNNS 873

GO:0031252 "cell leading edge" evidence=IDA

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0042995 "cell projection" evidence=IEA

GO:0006935 "chemotaxis" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0005938 "cell cortex" evidence=IEA

DICTYBASE|DDB_G0289117 myoB "myosin IB" [Dictyostelium discoideum (taxid:44689)]

 Score = 186 (70.5 bits), Expect = 3.7e-13, P = 3.7e-13
 Identities = 49/153 (32%), Positives = 79/153 (51%)

Query:    55 FMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQ-VLFADKILKFTGSGKMKRR 113
             F   K R++ S+ R +  DY+D  +   L + +Q    K+ V+FAD ++K     K K  
Sbjct:   725 FKDKKERQRNSIDRKFTSDYIDFENQFGLQEAMQNAHKKERVVFADTVIKIDRRAKQKNY 784

Query:   114 ILLITDFAIYLVDPE------TDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA 167
              +++TD A+Y V+           L RR+ L  ++ + +S LSDN     +P E+D ++ 
Sbjct:   785 EMVLTDQALYFVEKSIKKKVLVHTLIRRVGLREIKGVSISTLSDNVIVFHLP-EHDQVIE 843

Query:   168 STRKTEIVTVLVEATKG-ASEELEVAFSNSFEY 199
             + +KTEI+ VLVE  K      L V FS+   Y
Sbjct:   844 NDKKTEIIIVLVEYFKAIGGGSLNVQFSDRINY 876

GO:0097203 "phagocytic cup lip" evidence=IDA

GO:0030670 "phagocytic vesicle membrane" evidence=IDA

GO:0006909 "phagocytosis" evidence=IEP;IMP

GO:0006887 "exocytosis" evidence=IEP

GO:0051015 "actin filament binding" evidence=IDA

GO:0042641 "actomyosin" evidence=IDA

GO:0033275 "actin-myosin filament sliding" evidence=IDA

GO:0030898 "actin-dependent ATPase activity" evidence=IDA

GO:0016461 "unconventional myosin complex" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA;IDA

GO:0000146 "microfilament motor activity" evidence=IDA

GO:0032031 "myosin I head/neck binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0031252 "cell leading edge" evidence=IDA;TAS

GO:0045335 "phagocytic vesicle" evidence=IDA

GO:0051707 "response to other organism" evidence=TAS

GO:0006928 "cellular component movement" evidence=IMP

GO:0016459 "myosin complex" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0042995 "cell projection" evidence=IEA

GO:0006935 "chemotaxis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0031143 "pseudopodium" evidence=IEA

GO:0005938 "cell cortex" evidence=IEA

GO:0044656 "regulation of post-lysosomal vacuole size" evidence=IMP

GO:0044655 "phagosome reneutralization" evidence=IMP

DICTYBASE|DDB_G0276617 myoC "myosin IC" [Dictyostelium discoideum (taxid:44689)]

 Score = 186 (70.5 bits), Expect = 4.0e-13, P = 4.0e-13
 Identities = 52/162 (32%), Positives = 84/162 (51%)

Query:    50 EDQEPFMGIKVRRKASLH--RDYKGDYLDVASHPYLMKILQKQGDKQVLFADK----ILK 103
             ++++ F G K R + S+   R Y GDYLDV S  Y +  + +  ++ V+F+ K    +  
Sbjct:   763 QNEQLFQGRKERNRFSMISVRKYFGDYLDVRSQSYFLDAMAEGRNEDVIFSSKSQVMVHP 822

Query:   104 FTGSGKMKRRILLITDFAIYLVDPE------TDALKRRIALAAVEKMCLSELSDNFFAII 157
                + K+  R L++T  AIYL+  +      T  L RR+ LA V    LS L+DN   I 
Sbjct:   823 ILSANKLSPRFLIVTKQAIYLIKLKQKKNLATYLLDRRVPLAEVTSFSLSSLADNLLVIH 882

Query:   158 IPSEYDLLMASTRKTEIVTVLVEATKGASEELEVAFSNSFEY 199
               +++D+ + +  KTE+V  L+   KG +  L V F  S +Y
Sbjct:   883 TSTQFDVAVTTEFKTELVA-LINKQKGTT--LAVNFGQSIQY 921

GO:0097203 "phagocytic cup lip" evidence=IDA

GO:0031252 "cell leading edge" evidence=IDA

GO:0006909 "phagocytosis" evidence=IMP

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0042995 "cell projection" evidence=IEA

GO:0006935 "chemotaxis" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|F1S057 MYO1E "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 183 (69.5 bits), Expect = 7.7e-13, P = 7.7e-13
 Identities = 49/161 (30%), Positives = 88/161 (54%)

Query:    50 EDQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGK 109
             E  +  +  K RR+ S++R++ GDY+ +  HP L + + K+  +++ FAD + K+    K
Sbjct:   721 EASDLLLNKKERRRNSINRNFIGDYIGMEEHPELQQFVGKR--EKIDFADTVTKYDRRFK 778

Query:   110 MKRRILLITDFAIYLVDPET-----------DALKRRIALAAVEKMCLSELSDNFFAIII 158
               +R LL+T   +YL+  E            + LKRRI +  +  + LS + D+ F I+ 
Sbjct:   779 SVKRDLLLTPKCLYLIGREKVKQGPDKGLVKEVLKRRIEMERILSVSLSTMQDDIF-ILH 837

Query:   159 PSEYDLLMASTRKTEIVTVLVEATKGASE-ELEVAFSNSFE 198
               EYD L+ S  KTE +++L +  +  ++ +L + FSN+ E
Sbjct:   838 EQEYDSLLESVFKTEFLSLLAKRYEEKTQKQLPLKFSNTLE 878

GO:0072015 "glomerular visceral epithelial cell development" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0045334 "clathrin-coated endocytic vesicle" evidence=IEA

GO:0042623 "ATPase activity, coupled" evidence=IEA

GO:0035166 "post-embryonic hemopoiesis" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0005912 "adherens junction" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0003094 "glomerular filtration" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|F1MQ65 MYO1E "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 182 (69.1 bits), Expect = 9.9e-13, P = 9.9e-13
 Identities = 48/152 (31%), Positives = 85/152 (55%)

Query:    59 KVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLIT 118
             K RR+ S++R++ GDY+ +  HP L + + K+  +++ FAD + K+    K  +R LL+T
Sbjct:   730 KERRRNSINRNFIGDYIGMEEHPELQQFVGKR--EKIDFADTVTKYDRRFKSVKRDLLLT 787

Query:   119 DFAIYLVDPET-----------DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA 167
                +YL+  E            + LKRRI +  +  + LS + D+ F I+   EYD L+ 
Sbjct:   788 PKCLYLIGREKVKQGPDKGLVKEVLKRRIEMERILSVSLSTMQDDLF-ILHEQEYDSLLE 846

Query:   168 STRKTEIVTVLVEATKGASE-ELEVAFSNSFE 198
             S  KTE +++L +  +  ++ +L + FSN+ E
Sbjct:   847 SVFKTEFLSLLAKRYEEKTQKQLPLKFSNTLE 878

GO:0072015 "glomerular visceral epithelial cell development" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0045334 "clathrin-coated endocytic vesicle" evidence=IEA

GO:0042623 "ATPase activity, coupled" evidence=IEA

GO:0035166 "post-embryonic hemopoiesis" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0005912 "adherens junction" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0003094 "glomerular filtration" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

ZFIN|ZDB-GENE-081104-506 myo1f "myosin IF" [Danio rerio (taxid:7955)]

 Score = 180 (68.4 bits), Expect = 1.6e-12, P = 1.6e-12
 Identities = 49/154 (31%), Positives = 89/154 (57%)

Query:    59 KVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLIT 118
             K RR+ S++R++ GDYL +   P L + + K+  ++V FAD + KF    K  +R L+++
Sbjct:   727 KERRRNSINRNFVGDYLGMEDRPELRQFMAKR--ERVDFADSVNKFDRRFKSIKRDLILS 784

Query:   119 DFAIYLVD-------PET----DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA 167
               +IYL+        PE     + LKRR+ ++ +  + LS   D+FF I+  +EYD L+ 
Sbjct:   785 PKSIYLIGREKIKKGPEKGQIKEVLKRRLDISGIRSVSLSTRQDDFF-ILHETEYDSLLE 843

Query:   168 STRKTEIVTVLVEATKGASE-ELEVAFSNSFEYH 200
             S  KTE +T+L +  +  +  +L ++FS+  +++
Sbjct:   844 SMFKTEFLTLLCKRYEEQTRSKLTLSFSDRLQFN 877

GO:0003774 "motor activity" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1P7L9 MYO1E "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 178 (67.7 bits), Expect = 2.6e-12, P = 2.6e-12
 Identities = 48/161 (29%), Positives = 88/161 (54%)

Query:    50 EDQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGK 109
             E  +  +  K RR+ S++R++ GDY+ +  HP L + + K+  +++ FAD + K+    K
Sbjct:   721 EASDLLLNKKERRRNSINRNFIGDYIGMEEHPELQQFVGKR--EKIDFADTVTKYDRRFK 778

Query:   110 MKRRILLITDFAIYLVDPET-----------DALKRRIALAAVEKMCLSELSDNFFAIII 158
               +R LL+T   +YL+  E            + LKR+I +  +  + LS + D+ F I+ 
Sbjct:   779 GVKRDLLLTPKCLYLIGREKVKQGPDKGLVKEVLKRKIEMERILSVSLSTMQDDIF-ILH 837

Query:   159 PSEYDLLMASTRKTEIVTVLVEATKGASE-ELEVAFSNSFE 198
               EYD L+ S  KTE +++L +  +  ++ +L + FSN+ E
Sbjct:   838 EQEYDSLLESVFKTEFLSLLAKRYEEKTQKQLPLKFSNTLE 878

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|Q12965 MYO1E "Unconventional myosin-Ie" [Homo sapiens (taxid:9606)]

 Score = 178 (67.7 bits), Expect = 2.6e-12, P = 2.6e-12
 Identities = 48/161 (29%), Positives = 88/161 (54%)

Query:    50 EDQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGK 109
             E  +  +  K RR+ S++R++ GDY+ +  HP L + + K+  +++ FAD + K+    K
Sbjct:   721 EASDLLLNKKERRRNSINRNFIGDYIGMEEHPELQQFVGKR--EKIDFADTVTKYDRRFK 778

Query:   110 MKRRILLITDFAIYLVDPET-----------DALKRRIALAAVEKMCLSELSDNFFAIII 158
               +R LL+T   +YL+  E            + LKR+I +  +  + LS + D+ F I+ 
Sbjct:   779 GVKRDLLLTPKCLYLIGREKVKQGPDKGLVKEVLKRKIEIERILSVSLSTMQDDIF-ILH 837

Query:   159 PSEYDLLMASTRKTEIVTVLVEATKGASE-ELEVAFSNSFE 198
               EYD L+ S  KTE +++L +  +  ++ +L + FSN+ E
Sbjct:   838 EQEYDSLLESVFKTEFLSLLAKRYEEKTQKQLPLKFSNTLE 878

GO:0005524 "ATP binding" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0035166 "post-embryonic hemopoiesis" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0000146 "microfilament motor activity" evidence=TAS

GO:0030048 "actin filament-based movement" evidence=TAS

GO:0003094 "glomerular filtration" evidence=ISS

GO:0032836 "glomerular basement membrane development" evidence=ISS

GO:0072015 "glomerular visceral epithelial cell development" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005911 "cell-cell junction" evidence=ISS

GO:0005912 "adherens junction" evidence=ISS

GO:0042623 "ATPase activity, coupled" evidence=IDA

GO:0051015 "actin filament binding" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0016459 "myosin complex" evidence=TAS

GO:0006897 "endocytosis" evidence=IMP

GO:0045334 "clathrin-coated endocytic vesicle" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

GO:0035091 "phosphatidylinositol binding" evidence=IDA

GO:0003774 "motor activity" evidence=TAS

GO:0015629 "actin cytoskeleton" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00006485001 SubName- Full=Chromosome undetermined scaffold_171, whole genome shotgun sequence; (233 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	229
pfam06017	199	pfam06017, Myosin_TH1, Myosin tail	3e-36

>gnl|CDD|218855 pfam06017, Myosin_TH1, Myosin tail

 Score =  126 bits (318), Expect = 3e-36
 Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 8/165 (4%)

Query: 55  FMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDK-QVLFADKILKFTGSGKMKRR 113
             G K RR+ S++R + GDYL +  +P L K +  +    +VLFADK+ K   SGK  +R
Sbjct: 9   LKGKKERRRQSVNRKFVGDYLGLEENPKLQKAVGSEEGNEKVLFADKVNKVNRSGKPSKR 68

Query: 114 ILLITDFAIYLVDPE------TDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA 167
            LL+TD A+YLV  E      T  LKRRI L+ +  + LS L D+ F I +  + DL++ 
Sbjct: 69  DLLLTDKALYLVGREKVKDQKTYVLKRRIPLSEITSVSLSPLQDDLFVIHVSGKGDLVLE 128

Query: 168 STRKTEIVTVLVEATKGAS-EELEVAFSNSFEYHAAAELVKEVVF 211
           S  KTE+VTVL +    A+  +L V FS+S EY       + V F
Sbjct: 129 SDFKTELVTVLCKHYLKATGGKLPVNFSDSIEYRLKKGKTRTVTF 173

Length = 199

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	229
PF06017	199	Myosin_TH1: Myosin tail; InterPro: IPR010926 These	100.0
KOG0162	1106	consensus Myosin class I heavy chain [Cytoskeleton	99.97
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	99.96
PF14593	104	PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.	97.43
cd01262	89	PH_PDK1 3-Phosphoinositide dependent protein kinas	96.81
PF12456	115	hSac2: Inositol phosphatase ; InterPro: IPR022158	96.33
PF14470	96	bPH_3: Bacterial PH domain	95.65
smart00233	102	PH Pleckstrin homology domain. Domain commonly fou	95.15
PF00169	104	PH: PH domain; InterPro: IPR001849 The pleckstrin	95.12
cd00900	99	PH-like Pleckstrin homology-like domain. Pleckstri	94.33
PF10480	200	ICAP-1_inte_bdg: Beta-1 integrin binding protein;	91.63
cd00934	123	PTB Phosphotyrosine-binding (PTB) domain. Phosphot	91.56
cd00821	96	PH Pleckstrin homology (PH) domain. Pleckstrin hom	91.37
PF00640	140	PID: Phosphotyrosine interaction domain (PTB/PID)	91.14
cd01225	111	PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-	90.66
cd01244	98	PH_RasGAP_CG9209 RAS_GTPase activating protein (GA	90.05
smart00462	134	PTB Phosphotyrosine-binding domain, phosphotyrosin	86.81
cd01260	96	PH_CNK Connector enhancer of KSR (Kinase suppresso	86.59
cd01267	132	CED6_AIDA1b Phosphotyrosine-binding (PTB) domain,	85.59
cd01257	101	PH_IRS Insulin receptor substrate (IRS) pleckstrin	84.58

>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT)

Probab=100.00  E-value=4.8e-48  Score=330.18  Aligned_cols=180  Identities=41%  Similarity=0.638  Sum_probs=168.9

Q ss_pred             chhhhhhhccccccccccCCcCcccCccCCCCchHHHHHHhhcC-CccEEEeeeEEEeCCCCceeeeEEEEecCeEEEe-
Q 027012           48 VTEDQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQG-DKQVLFADKILKFTGSGKMKRRILLITDFAIYLV-  125 (229)
Q Consensus        48 ~~~a~~~f~gkK~Rrr~Sl~R~f~GDYL~~~~~~~~~~l~~k~~-~e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~l-  125 (229)
                      +.+|+++|+|+|+||+.|+.|+|.||||++.+++.+++++.+.+ +++|+||+.|.|+||++|+++|+||||++|||+| 
T Consensus         2 K~~a~~if~gkK~r~~~S~~r~f~gDyL~~~~~~~~~~~~~~~~~~e~vlFs~~v~K~nr~~K~~~R~livT~~~iY~l~   81 (199)
T PF06017_consen    2 KVAASDIFKGKKERRRSSVNRPFQGDYLGLNNNPKLQKILEKNEGDEKVLFSDRVQKYNRRNKPQPRILIVTDKAIYLLD   81 (199)
T ss_pred             HHHHHHHHhccccccccccCccccccccCccccccHHHHHHhccCCcceEEEEEEEEecCCCCccceEEEEeCCeEEEEE
Confidence            35799999999999999999999999999999999999999886 8999999999999999999999999999999999 


Q ss_pred             -----cCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeecCcHHHHHHHHHHHHhccCC-CeeEEEcccEEE
Q 027012          126 -----DPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATKGASE-ELEVAFSNSFEY  199 (229)
Q Consensus       126 -----d~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~~ktElvt~L~~~~~~~~~-~L~V~~~d~i~y  199 (229)
                           ++..+++|++|||++|++||||+++|+||||||+++||++|+|++++||+++|+++|++.++ +|+|+|+++|+|
T Consensus        82 ~~~~~~~~~~~~kr~i~l~~I~~IsvS~~~D~~~vihv~~~~D~il~~~~k~Elv~~L~~~~~~~~~~~l~v~~~~~i~~  161 (199)
T PF06017_consen   82 QRKVKDPKKYKLKRRIPLSDITGISVSPLSDNFFVIHVPGEGDLILESDFKTELVTILCKAYKKATGKKLPVNFSDSIQY  161 (199)
T ss_pred             EeecCCceeeEEEeccCcccccEEEEccCCCCEEEEEECCCCCEEEEeCcHHHHHHHHHHHHHHHhCCceeEEEeceEEE
Confidence                 56679999999999999999999999999999999999999999999999999999999988 999999999999


Q ss_pred             EEcCCceEEEEEEEeCCCccceeeeecc
Q 027012          200 HAAAELVKEVVFEEVEGGIKTRILTKSE  227 (229)
Q Consensus       200 ~~~~gk~~~V~F~~~~~~~~~~~~~k~~  227 (229)
                      +.++|+.++|.|..++.+.....+.|++
T Consensus       162 ~~~~~k~~~i~f~~~~~~~~~~~~~k~~  189 (199)
T PF06017_consen  162 KLKKGKTKTIKFSKDESPKVQPPIKKKK  189 (199)
T ss_pred             EEcCCceEEEEEEECCCCCCccceeecC
Confidence            9999999999999998887744454443

Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex

>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=99.97  E-value=3.5e-31  Score=256.23  Aligned_cols=171  Identities=31%  Similarity=0.525  Sum_probs=159.8

Q ss_pred             CcCcccchhhhhhhccccccccccCCcCcccCccCCCCchHHHHHHhhcCCccEEEeeeEEEeCCCCceeeeEEEEecCe
Q 027012           42 RPSENNVTEDQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFA  121 (229)
Q Consensus        42 ~~~~~~~~~a~~~f~gkK~Rrr~Sl~R~f~GDYL~~~~~~~~~~l~~k~~~e~VlFS~~V~Kinr~gK~~~R~LiITd~a  121 (229)
                      |.|++...+|.+++.|+|+|||.|+.|.|.||||++.+.|.++..+++.  ++|+||+.|.||+|+.|+.+|.||||.++
T Consensus       713 rky~k~ree~t~ll~gKKeRRr~Si~R~F~GDYl~~~e~~~l~~~vgkk--ekV~Fa~~~tK~~R~~k~~kr~llLT~k~  790 (1106)
T KOG0162|consen  713 RKYEKMREEATKLLLGKKERRRYSINRNFVGDYLGLEEHPTLQQFVGKK--EKVIFADTVTKYDRRFKPLKRDLLLTPKC  790 (1106)
T ss_pred             HHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhccccCCchhhhhhccc--ceEEEEeeecccccccccccceEEeccce
Confidence            5688889999999999999999999999999999999999988888864  99999999999999999999999999999


Q ss_pred             EEEecCC-----------cceeEEEeeccccceEEEeccCCcEEEEEe-CCCCCeeeecCcHHHHHHHHHHHHhccCC-C
Q 027012          122 IYLVDPE-----------TDALKRRIALAAVEKMCLSELSDNFFAIII-PSEYDLLMASTRKTEIVTVLVEATKGASE-E  188 (229)
Q Consensus       122 iY~ld~~-----------~~klKrrIpL~~I~gVSvS~~~D~~~VIhv-~~e~D~ll~s~~ktElvt~L~~~~~~~~~-~  188 (229)
                      +|+|...           ++.++++|++..|.+||+|+++|+||+|+. .+++|.+|.|.+||||+|.|++.|...++ +
T Consensus       791 lylig~~kvk~gpekg~~~e~~~~kidv~~I~sVsLs~~QDD~~~l~~~~~~~d~ll~t~FKTEf~t~L~k~~~e~~n~~  870 (1106)
T KOG0162|consen  791 LYLIGREKVKNGPEKGKVTEVLKRKIDVPQIKSVSLSNLQDDWVILYLGNDQYDSLLETPFKTEFITLLKKRYEERTNRK  870 (1106)
T ss_pred             EEEEeehhhhcCccccchhhhhhhccchhhhceeccccccccEEEEEecCCCcchHhhhhhHHHHHHHHHHHHHHhhcCc
Confidence            9999653           267899999999999999999999999998 46799999999999999999999999988 9


Q ss_pred             eeEEEcccEEEEEcCCceE-----EEEEEEe
Q 027012          189 LEVAFSNSFEYHAAAELVK-----EVVFEEV  214 (229)
Q Consensus       189 L~V~~~d~i~y~~~~gk~~-----~V~F~~~  214 (229)
                      |++.|+++|+|+.++|+..     +|+|..+
T Consensus       871 l~l~~~~tie~~~K~~k~~~~~~rtV~~~~~  901 (1106)
T KOG0162|consen  871 LQLKFGSTIEYSKKKGKWGFGDKRTVQFGID  901 (1106)
T ss_pred             eeEEeccceEEEecccccCCCcceeEEeccC
Confidence            9999999999999987766     9999887

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=99.96  E-value=3e-29  Score=242.53  Aligned_cols=178  Identities=23%  Similarity=0.337  Sum_probs=155.7

Q ss_pred             cchhhhhhhccccccccccCCcCcccCccCCCCch---------HHHHHHhhcCCccEEEeeeEEEeCCCCceeeeEEEE
Q 027012           47 NVTEDQEPFMGIKVRRKASLHRDYKGDYLDVASHP---------YLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLI  117 (229)
Q Consensus        47 ~~~~a~~~f~gkK~Rrr~Sl~R~f~GDYL~~~~~~---------~~~~l~~k~~~e~VlFS~~V~Kinr~gK~~~R~LiI  117 (229)
                      .+.+|+++|+|+|  ..|+..|.|.||||+...++         .++.+.+..+...|+||++|.|+||.+|++.|+|++
T Consensus       799 ~Ki~A~e~lkGkk--~~~gqsr~w~gdyL~~~~~~p~~~~~~~~~~~~l~~~e~fg~Vlfs~~V~K~NrfnK~~~R~lll  876 (1001)
T KOG0164|consen  799 QKIAASEALKGKK--ANWGQSRAWIGDYLGSQEENPGYSATFKNRLQQLKGSETFGPVLFSSHVKKVNRFNKPRSRALLL  876 (1001)
T ss_pred             HHHHHHHHhcCCc--ccccccchhhhhhcccCCCCCCcchhhHHHHHHhhccCCccceeehhhHHHhcccCCccceeEEe
Confidence            3568999999998  77888999999999988764         456666666678999999999999999999999999


Q ss_pred             ecCeEEEecCCccee-EEEeeccccceEEEeccCCcEEEEEeCCCCCeeee------cCcHHHHHHHHHHHHhccCCCee
Q 027012          118 TDFAIYLVDPETDAL-KRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA------STRKTEIVTVLVEATKGASEELE  190 (229)
Q Consensus       118 Td~aiY~ld~~~~kl-KrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~------s~~ktElvt~L~~~~~~~~~~L~  190 (229)
                      ||.++|++|+++.++ |+.|||.+|+|||||+++|++||+|+....|++.+      .+|++|++++|+.+|......|+
T Consensus       877 Td~~v~kld~~K~k~mK~~I~l~nltgiSVss~~D~LfvlH~~~~~Dlv~~~~~~~~e~rVgElvg~l~~~~~~~~r~l~  956 (1001)
T KOG0164|consen  877 TDRHVYKLDPKKQKVMKQTIPLANLTGISVSSGSDQLFVLHVSDNKDLVVCLDSVLQEDRVGELVGKLAAHYNDEGRSLN  956 (1001)
T ss_pred             ecCeEEEecchHhhHhhcccchhhccceeeecCCCceEEEEecCCcchhhhhhhhhhHHHHHHHHHHHHHHHhhhcceee
Confidence            999999999988665 77999999999999999999999999876677764      48999999999999999833999


Q ss_pred             EEEcccEEEEEcCCceEEEEEEEeCCCccceeeeeccC
Q 027012          191 VAFSNSFEYHAAAELVKEVVFEEVEGGIKTRILTKSES  228 (229)
Q Consensus       191 V~~~d~i~y~~~~gk~~~V~F~~~~~~~~~~~~~k~~~  228 (229)
                      |++++.+.++.. |+.++|+|+. .++...|++.|+++
T Consensus       957 V~vt~~~~~~~~-gk~~tI~v~~-a~~~~~p~~~~k~G  992 (1001)
T KOG0164|consen  957 VNVTSIISCRLP-GKDRTISVEP-AGNQEVPDFRKKNG  992 (1001)
T ss_pred             EEecceeEeecC-CcceEEEEEe-CCCCCCCceeccCC
Confidence            999999999998 8889999997 56666777777765

>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A

Probab=97.43  E-value=0.0013  Score=51.27  Aligned_cols=73  Identities=25%  Similarity=0.316  Sum_probs=54.8

Q ss_pred             CccEEEeeeEEEeCCCCceeeeEEEEecC-eEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeec
Q 027012           92 DKQVLFADKILKFTGSGKMKRRILLITDF-AIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMAS  168 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~gK~~~R~LiITd~-aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s  168 (229)
                      +|.|+....|.|-..- -...|.||+|+. .||-+|+.+..+|-.||++.  .+++...+..-|.||+|. -.|.|..
T Consensus        10 ge~Il~~g~v~K~kgl-~~kkR~liLTd~PrL~Yvdp~~~~~KGeI~~~~--~l~v~~k~~~~F~I~tp~-RtY~l~d   83 (104)
T PF14593_consen   10 GELILKQGYVKKRKGL-FAKKRQLILTDGPRLFYVDPKKMVLKGEIPWSK--ELSVEVKSFKTFFIHTPK-RTYYLED   83 (104)
T ss_dssp             T--EEEEEEEEEEETT-EEEEEEEEEETTTEEEEEETTTTEEEEEE--ST--T-EEEECSSSEEEEEETT-EEEEEE-
T ss_pred             CCeEEEEEEEEEeece-EEEEEEEEEccCCEEEEEECCCCeECcEEecCC--ceEEEEccCCEEEEECCC-cEEEEEC
Confidence            6899999999998443 378999999999 99999999999999999994  455555666678899995 5666653

>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain

Probab=96.81  E-value=0.009  Score=45.35  Aligned_cols=69  Identities=22%  Similarity=0.278  Sum_probs=52.1

Q ss_pred             EEeeeEEEeCCCCceeeeEEEEecC-eEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeee
Q 027012           96 LFADKILKFTGSGKMKRRILLITDF-AIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA  167 (229)
Q Consensus        96 lFS~~V~Kinr~gK~~~R~LiITd~-aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~  167 (229)
                      ++...|.|...- =..+|.|||||. .++.+|+.+..+|-.||++.+ ++++-..+..-|.||.|+ -.+.|+
T Consensus         2 l~~g~v~Kr~gl-f~kkR~LiLTd~PrL~yvdp~~~~~KgeIp~s~~-~l~v~~~~~~~F~I~Tp~-rty~le   71 (89)
T cd01262           2 LKIGAVKKRKGL-FAKKRQLILTNGPRLIYVDPVKKVVKGEIPWSDV-ELRVEVKNSSHFFVHTPN-KVYSFE   71 (89)
T ss_pred             ceeeeeeehhcc-ccceeeEEEecCceEEEEcCCcCeEEeEeccccc-ceEEEEecCccEEEECCC-ceEEEE
Confidence            445555554442 348899999998 899999999999999999994 566666666667889987 456654

3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PF12456 hSac2: Inositol phosphatase ; InterPro: IPR022158 This domain family is found in eukaryotes, and is approximately 120 amino acids in length

Probab=96.33  E-value=0.019  Score=45.26  Aligned_cols=58  Identities=21%  Similarity=0.312  Sum_probs=46.2

Q ss_pred             CccEEEeeeEEEeCCCC---ceeeeEEEEecCeEEEec--CCccee--EEEeeccccceEEEecc
Q 027012           92 DKQVLFADKILKFTGSG---KMKRRILLITDFAIYLVD--PETDAL--KRRIALAAVEKMCLSEL  149 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~g---K~~~R~LiITd~aiY~ld--~~~~kl--KrrIpL~~I~gVSvS~~  149 (229)
                      +|.++=+=.+..+|..+   ..++|+||||++|+|++.  -...++  =+||||.+|.+|.+=++
T Consensus        28 ~e~~i~gW~L~~~~~~~~~~~e~E~vlLLTd~alyi~~YD~~~~kv~~~~ri~L~~I~~I~~G~~   92 (115)
T PF12456_consen   28 DEEFIGGWLLTEPDHWNKTENEEERVLLLTDKALYICKYDFIMEKVSQFQRIPLNDIDKIQIGTF   92 (115)
T ss_pred             CCcEEEEEEEEecCcccCCCcccceEEEEecCEEEEEEecCCCccEEEEEEEecccCcEEEEecc
Confidence            67777777788999988   999999999999999983  222333  57799999999987543

The family is found in association with PF02383 from PFAM. hSac2 functions as an inositol polyphosphate 5-phosphatase.

>PF14470 bPH_3: Bacterial PH domain

Probab=95.65  E-value=0.33  Score=35.62  Aligned_cols=81  Identities=7%  Similarity=0.069  Sum_probs=57.2

Q ss_pred             CCccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCcc--eeEEEeeccccceEEEec-cCCcEEEEEeCCCCCeeee
Q 027012           91 GDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETD--ALKRRIALAAVEKMCLSE-LSDNFFAIIIPSEYDLLMA  167 (229)
Q Consensus        91 ~~e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~~--klKrrIpL~~I~gVSvS~-~~D~~~VIhv~~e~D~ll~  167 (229)
                      .+|.|+|.... .++..+...+-++++||+.|+.+...-+  .....+|+.+|++|++.. .-.+-+.|+. ++..+-+.
T Consensus         3 ~~E~I~~~~~~-~~~~~~~~~~g~l~~TnkRlif~~~~~~~~~~~~~i~y~~I~~v~~~~g~~~~~i~i~~-~~~~~~i~   80 (96)
T PF14470_consen    3 EDEEIEYVAVG-SYNYFFTSFPGVLVLTNKRLIFYSKGMFGGKKFESIPYDDITSVSFKKGILGGKITIET-NGEKIKID   80 (96)
T ss_pred             CCCEEEEEEEE-EEeecccCceeEEEEeCCEEEEEEcccCCCceEEEEEhhheEEEEEEccccccEEEEEE-CCEEEEEE
Confidence            46888887765 4444467788899999999999987522  446779999999999985 3335577787 44455555


Q ss_pred             cCcHHH
Q 027012          168 STRKTE  173 (229)
Q Consensus       168 s~~ktE  173 (229)
                      +-.+.+
T Consensus        81 ~i~k~~   86 (96)
T PF14470_consen   81 NIQKGD   86 (96)
T ss_pred             EcCHHH
Confidence            434433

>smart00233 PH Pleckstrin homology domain

Probab=95.15  E-value=0.69  Score=32.26  Aligned_cols=85  Identities=14%  Similarity=0.155  Sum_probs=63.1

Q ss_pred             EEeeeEEEeCC--CCceeeeEEEEecCeEEEecCCc----ceeEEEeeccccceEEEeccC-----CcEEEEEeCCCCCe
Q 027012           96 LFADKILKFTG--SGKMKRRILLITDFAIYLVDPET----DALKRRIALAAVEKMCLSELS-----DNFFAIIIPSEYDL  164 (229)
Q Consensus        96 lFS~~V~Kinr--~gK~~~R~LiITd~aiY~ld~~~----~klKrrIpL~~I~gVSvS~~~-----D~~~VIhv~~e~D~  164 (229)
                      ++...+.+...  .+..++|.++|++..++......    ......|+|.++ .|+.....     ++.|.|..++..-+
T Consensus         2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~-~v~~~~~~~~~~~~~~f~l~~~~~~~~   80 (102)
T smart00233        2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSGI-TVREAPDPDSAKKPHCFEIKTADRRSY   80 (102)
T ss_pred             ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCccccCCCceEEECCcC-EEEeCCCCccCCCceEEEEEecCCceE
Confidence            34566667665  67899999999999998887643    466788999998 77766553     55667776654488


Q ss_pred             eeecCcHHHHHHHHHHH
Q 027012          165 LMASTRKTEIVTVLVEA  181 (229)
Q Consensus       165 ll~s~~ktElvt~L~~~  181 (229)
                      +|.++...|...++...
T Consensus        81 ~f~~~s~~~~~~W~~~i   97 (102)
T smart00233       81 LLQAESEEEREEWVDAL   97 (102)
T ss_pred             EEEcCCHHHHHHHHHHH
Confidence            89898877877766654

Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.

>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]

Probab=95.12  E-value=0.8  Score=32.71  Aligned_cols=85  Identities=18%  Similarity=0.206  Sum_probs=64.1

Q ss_pred             EEeeeEEEeC-CCCceeeeEEEEecCeEEEecCCc----ceeEEEeeccccceEEEecc--------CCcEEEEEeCCCC
Q 027012           96 LFADKILKFT-GSGKMKRRILLITDFAIYLVDPET----DALKRRIALAAVEKMCLSEL--------SDNFFAIIIPSEY  162 (229)
Q Consensus        96 lFS~~V~Kin-r~gK~~~R~LiITd~aiY~ld~~~----~klKrrIpL~~I~gVSvS~~--------~D~~~VIhv~~e~  162 (229)
                      .-+..+.|.. ...+-++|.++|++..|+......    ...+..|+|.++ .|.....        ..+.|.|+.++..
T Consensus         2 ~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~~-~v~~~~~~~~~~~~~~~~~f~i~~~~~~   80 (104)
T PF00169_consen    2 IKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDDC-TVRPDPSSDFLSNKKRKNCFEITTPNGK   80 (104)
T ss_dssp             EEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTTE-EEEEETSSTSTSTSSSSSEEEEEETTSE
T ss_pred             EEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCccccceeeeEEEEecCc-eEEEcCccccccccCCCcEEEEEeCCCc
Confidence            3455566666 467889999999999999997654    567888999999 5555333        4468888888766


Q ss_pred             CeeeecCcHHHHHHHHHHH
Q 027012          163 DLLMASTRKTEIVTVLVEA  181 (229)
Q Consensus       163 D~ll~s~~ktElvt~L~~~  181 (229)
                      -++|.++...|.-.++...
T Consensus        81 ~~~~~~~s~~~~~~W~~~i   99 (104)
T PF00169_consen   81 SYLFSAESEEERKRWIQAI   99 (104)
T ss_dssp             EEEEEESSHHHHHHHHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHH
Confidence            8999998888877766554

The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....

>cd00900 PH-like Pleckstrin homology-like domain

Probab=94.33  E-value=0.78  Score=31.99  Aligned_cols=71  Identities=17%  Similarity=0.211  Sum_probs=52.5

Q ss_pred             CceeeeEEEEecCeEEEecCCcceeE--EEeeccccceEEEecc---CCcEEEEEeCC--CCCeeeecCcHHHHHHHHH
Q 027012          108 GKMKRRILLITDFAIYLVDPETDALK--RRIALAAVEKMCLSEL---SDNFFAIIIPS--EYDLLMASTRKTEIVTVLV  179 (229)
Q Consensus       108 gK~~~R~LiITd~aiY~ld~~~~klK--rrIpL~~I~gVSvS~~---~D~~~VIhv~~--e~D~ll~s~~ktElvt~L~  179 (229)
                      +.-++|.++|++..|+..+...-+..  ..+++..+. |+..+.   .++.|.|....  ...+.|.++...|.-.++.
T Consensus        17 ~~w~~~~~~l~~~~l~~~~~~~~~~~~~~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~~~~~~~~~~~~~~~~~~W~~   94 (99)
T cd00900          17 KRWKRRWFFLFDDGLLLYKSDDKKEIKPGSIPLSEIS-VEEDPDGSDDPNCFAIVTKDRGRRVFVFQADSEEEAQEWVE   94 (99)
T ss_pred             cCceeeEEEEECCEEEEEEcCCCCcCCCCEEEccceE-EEECCCCCCCCceEEEECCCCCcEEEEEEcCCHHHHHHHHH
Confidence            67899999999999999987654443  368999888 777654   45777787764  6788898877655554443

Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.

>PF10480 ICAP-1_inte_bdg: Beta-1 integrin binding protein; InterPro: IPR019517 ICAP-1 is a serine/threonine-rich protein that binds to the cytoplasmic domains of beta-1 integrins in a highly specific manner, binding to a NPXY sequence motif on the beta-1 integrin

Probab=91.63  E-value=1  Score=38.77  Aligned_cols=71  Identities=23%  Similarity=0.366  Sum_probs=51.5

Q ss_pred             eeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCc------EEEEEeCCC----CCeee-ecCcH---HHHHH
Q 027012          111 KRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDN------FFAIIIPSE----YDLLM-ASTRK---TEIVT  176 (229)
Q Consensus       111 ~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~------~~VIhv~~e----~D~ll-~s~~k---tElvt  176 (229)
                      .+.+|-||...|=+.+...+.+..|+||..|.  .+..+.|+      +|++.+.++    |++.+ +|...   .|++.
T Consensus       108 eevil~VSKyGiKvt~~d~~~VL~RhpL~~Iv--r~V~YdDGlG~g~~llAlK~~~~~~e~y~l~v~Qcss~~qA~~ICk  185 (200)
T PF10480_consen  108 EEVILSVSKYGIKVTDNDQRDVLHRHPLHEIV--RMVCYDDGLGAGKNLLALKVGDERQEEYQLWVYQCSSDEQAQEICK  185 (200)
T ss_pred             CeEEEEEeeccEEEeecCCcceeeeeeeeeEE--EEEEEecCcCCcceEEEEEccCCCcceEEEEEEEcCCHHHHHHHHH
Confidence            67888899999999998889999999999995  33445555      577788654    55544 66443   55666


Q ss_pred             HHHHHHh
Q 027012          177 VLVEATK  183 (229)
Q Consensus       177 ~L~~~~~  183 (229)
                      .|..++.
T Consensus       186 ~l~~aF~  192 (200)
T PF10480_consen  186 VLGQAFD  192 (200)
T ss_pred             HHHHHHH
Confidence            6666665

The cytoplasmic domains of integrins are essential for cell adhesion, and the fact that phosphorylation of ICAP-1 by interaction with the cell-matrix implies an important role of ICAP-1 during integrin-dependent cell adhesion []. Over expression of ICAP-1 strongly reduces the integrin-mediated cell spreading on extracellular matrix and inhibits both Cdc42 and Rac1. In addition, ICAP-1 induces release of Cdc42 from cellular membranes and prevents the dissociation of GDP from this GTPase []. An additional function of ICAP-1 is to promote differentiation of osteoprogenitors by supporting their condensation through modulating the integrin high affinity state [].

>cd00934 PTB Phosphotyrosine-binding (PTB) domain

Probab=91.56  E-value=2  Score=32.65  Aligned_cols=77  Identities=17%  Similarity=0.148  Sum_probs=59.5

Q ss_pred             CceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCC-----CeeeecCcH-HHHHHHHHHH
Q 027012          108 GKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEY-----DLLMASTRK-TEIVTVLVEA  181 (229)
Q Consensus       108 gK~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~-----D~ll~s~~k-tElvt~L~~~  181 (229)
                      .+.++-.|-||...|-++++.+..+-...|+..|+-.++-+...++|.+-+....     -.+|.|... .+++..|..+
T Consensus        39 ~~~~~v~l~vs~~gv~l~d~~~~~~l~~~~l~~Is~~~~~~~~~~~F~~i~~~~~~~~~~CHvF~c~~~a~~i~~~l~~a  118 (123)
T cd00934          39 EKGQKVILSVSSDGVKLIDPKTKEVLASHPIRRISFCAADPDDLRIFAFIAREPGSSRFECHVFKCEKVAEPIALTLGQA  118 (123)
T ss_pred             cCCCEEEEEEEcCcEEEEeCCCCcEEEeeccceEEEEECCCCCCcEEEEEEEcCCCCcEEEEEEEeCchHHHHHHHHHHH
Confidence            4667788899999999999987777777899999888887766778887775433     445567666 7788888888


Q ss_pred             Hhc
Q 027012          182 TKG  184 (229)
Q Consensus       182 ~~~  184 (229)
                      ++.
T Consensus       119 f~~  121 (123)
T cd00934         119 FQV  121 (123)
T ss_pred             HHH
Confidence            763

Phosphotyrosine-binding (PTB) domain; PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domain of SHC binds to a NPXpY sequence. More recent studies have found that some types of PTB domains such as the neuronal protein X11 and in the cell-fate determinant protein Numb can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.

>cd00821 PH Pleckstrin homology (PH) domain

Probab=91.37  E-value=2.3  Score=29.25  Aligned_cols=73  Identities=18%  Similarity=0.170  Sum_probs=54.7

Q ss_pred             CceeeeEEEEecCeEEEecCCc----ceeEEEeeccccceEEEeccC---CcEEEEEeCCCCCeeeecCcHHHHHHHHHH
Q 027012          108 GKMKRRILLITDFAIYLVDPET----DALKRRIALAAVEKMCLSELS---DNFFAIIIPSEYDLLMASTRKTEIVTVLVE  180 (229)
Q Consensus       108 gK~~~R~LiITd~aiY~ld~~~----~klKrrIpL~~I~gVSvS~~~---D~~~VIhv~~e~D~ll~s~~ktElvt~L~~  180 (229)
                      +.-++|.++|++..++..+...    ......|+|.+ ..|...+..   ...|.|...+...+.|.++...|....+..
T Consensus        14 ~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~-~~v~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~   92 (96)
T cd00821          14 KGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLSG-AEVEESPDDSGRKNCFEIRTPDGRSYLLQAESEEEREEWIEA   92 (96)
T ss_pred             CCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcCC-CEEEECCCcCCCCcEEEEecCCCcEEEEEeCCHHHHHHHHHH
Confidence            5678999999999998887643    46778899999 566666554   456777766657888888888887776654


Q ss_pred             H
Q 027012          181 A  181 (229)
Q Consensus       181 ~  181 (229)
                      .
T Consensus        93 l   93 (96)
T cd00821          93 L   93 (96)
T ss_pred             H
Confidence            3

Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>PF00640 PID: Phosphotyrosine interaction domain (PTB/PID) A page on PI domains

Probab=91.14  E-value=2.5  Score=33.00  Aligned_cols=77  Identities=16%  Similarity=0.175  Sum_probs=58.2

Q ss_pred             CceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEE-eccCCcEEEEEeCCCC-----CeeeecC-cHHHHHHHHHH
Q 027012          108 GKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCL-SELSDNFFAIIIPSEY-----DLLMAST-RKTEIVTVLVE  180 (229)
Q Consensus       108 gK~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSv-S~~~D~~~VIhv~~e~-----D~ll~s~-~ktElvt~L~~  180 (229)
                      .+.++-.|.||...|-++++.+-.+-...||..|+-.+. .+....+|......+.     -.+|.|. .-.||+..|.+
T Consensus        49 ~~~~~V~l~vs~~gI~v~~~~t~~~l~~~~i~~Is~~~~~d~~~~~~Fafi~~~~~~~~~~CHVF~~~~~A~~i~~~i~~  128 (140)
T PF00640_consen   49 KKPQKVTLNVSSDGIKVIDPDTGEVLMSHPIRRISFCAVGDPDDKRVFAFIARDPRSSRFYCHVFKCEDQAQEICQAIGQ  128 (140)
T ss_dssp             STSEEEEEEEETTEEEEEETTTTCEEEEEEGGGEEEEEESSTTETTEEEEEEEETSSSCEEEEEEEESSCHHHHHHHHHH
T ss_pred             ccCeEEEEEEcCCeEEEecCccccccccCCccceEEEEecCCCcceEEEEEeccCCCCccccEeeeHhhHHHHHHHHHHH
Confidence            456777888999999999998888888999999999999 5555567777553322     2455554 46888888888


Q ss_pred             HHhc
Q 027012          181 ATKG  184 (229)
Q Consensus       181 ~~~~  184 (229)
                      ++..
T Consensus       129 aF~~  132 (140)
T PF00640_consen  129 AFEL  132 (140)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

; InterPro: IPR006020 The PI domain has a similar structure to the insulin receptor substrate-1 PTB domain, a 7-stranded beta-sandwich, capped by a C-terminal helix. However, the PI domain contains an additional short N-terminal helix and a large insertion between strands 1 and 2, which forms a helix and 2 long connecting loops. The substrate peptide fits into a surface cleft formed from the C-terminal helix and strand 5 [].; GO: 0005515 protein binding; PDB: 1WGU_A 2YT0_A 2YT1_A 2YSZ_A 2ROZ_B 3SO6_A 2DYQ_A 1AQC_A 1X11_B 1WJ1_A ....

>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain

Probab=90.66  E-value=4.7  Score=31.88  Aligned_cols=87  Identities=14%  Similarity=0.237  Sum_probs=62.4

Q ss_pred             ccEEEeeeEEEeCCCC-ceeeeEEEEecCeEEEecC----CcceeEEEeeccccceEEEeccCC-----cEEEEEeCCCC
Q 027012           93 KQVLFADKILKFTGSG-KMKRRILLITDFAIYLVDP----ETDALKRRIALAAVEKMCLSELSD-----NFFAIIIPSEY  162 (229)
Q Consensus        93 e~VlFS~~V~Kinr~g-K~~~R~LiITd~aiY~ld~----~~~klKrrIpL~~I~gVSvS~~~D-----~~~VIhv~~e~  162 (229)
                      +.|++++.|.=-|-.+ -..+|.|++=...++.+..    ..|..+.++||+.|   ++.++.|     +-|-|-=+.-.
T Consensus        10 G~vi~mS~V~~~~~~~qe~~eRyLvLFp~~LlilS~s~r~sGf~yqGkLPL~~i---~v~~lEd~e~~~~aFeI~G~li~   86 (111)
T cd01225          10 GNVIHMSQVAVQYGAGEEKRERYLVLFPNVLLMLSASPRMSGFIYQGKLPLTGI---IVTRLEDTEALKNAFEISGPLIE   86 (111)
T ss_pred             CceEEEEEEEEecCCccccceeEEEEcCceEEEEEcCCCccceEEeeeeccccc---EEechHhccCccceEEEeccCcC
Confidence            6788998887766643 6789999999999999976    24888999998866   4444433     23333223235


Q ss_pred             CeeeecCcHHHHHHHHHHHH
Q 027012          163 DLLMASTRKTEIVTVLVEAT  182 (229)
Q Consensus       163 D~ll~s~~ktElvt~L~~~~  182 (229)
                      -+++.|.+..|+-.+|...-
T Consensus        87 ~i~v~C~~~~e~~~Wl~hL~  106 (111)
T cd01225          87 RIVVVCNNPQDAQEWVELLN  106 (111)
T ss_pred             cEEEEeCCHHHHHHHHHHHH
Confidence            67778999999988876653

Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain

Probab=90.05  E-value=2.7  Score=32.13  Aligned_cols=70  Identities=14%  Similarity=0.106  Sum_probs=50.3

Q ss_pred             eeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEec---cC-CcEEEEEeCCCCCeeeecCcHHHHHHHHHH
Q 027012          110 MKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSE---LS-DNFFAIIIPSEYDLLMASTRKTEIVTVLVE  180 (229)
Q Consensus       110 ~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~---~~-D~~~VIhv~~e~D~ll~s~~ktElvt~L~~  180 (229)
                      -..|.++||+..|+-.+...-..+-.|||+.|.+|..-.   .. .+.|-|..| +.-+.|.|+.-.|.-.+|..
T Consensus        21 ~KkRwF~Lt~~~L~Y~k~~~~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~-~r~~yi~a~s~~E~~~Wi~a   94 (98)
T cd01244          21 FKKRYFQLTTTHLSWAKDVQCKKSALIKLAAIKGTEPLSDKSFVNVDIITIVCE-DDTMQLQFEAPVEATDWLNA   94 (98)
T ss_pred             CceeEEEECCCEEEEECCCCCceeeeEEccceEEEEEcCCcccCCCceEEEEeC-CCeEEEECCCHHHHHHHHHH
Confidence            368999999999977776567788899999999986422   11 233444334 46788889888887766654

RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>smart00462 PTB Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain

Probab=86.81  E-value=8.4  Score=29.80  Aligned_cols=77  Identities=16%  Similarity=0.175  Sum_probs=58.0

Q ss_pred             CceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCC-----eeeecCcH-HHHHHHHHHH
Q 027012          108 GKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYD-----LLMASTRK-TEIVTVLVEA  181 (229)
Q Consensus       108 gK~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D-----~ll~s~~k-tElvt~L~~~  181 (229)
                      .+.++-.|.||...|-+++..+-.+-...|+..|+-.+.-+...++|.+-...+.+     .+|.|+.. .|++..|.++
T Consensus        41 ~~~~~v~l~vs~~gv~v~~~~~~~~l~~~~l~~Isf~~~~~~~~~~F~fI~~~~~~~~~~CHvF~c~~~a~~i~~~i~~a  120 (134)
T smart00462       41 KEPQKVILSISSRGVKLIDEDTKAVLHEHPLRRISFCAVGPDDLDVFGYIARDPGSSRFACHVFRCEKAAEDIALAIGQA  120 (134)
T ss_pred             CCCCEEEEEEECCcEEEEECCCCeEEEEccccceEEEecCCCCCcEEEEEeeCCCCCeEEEEEEEcCchHHHHHHHHHHH
Confidence            45677788899999999998777777789999999998877666777777755443     34455443 5788888888


Q ss_pred             Hhc
Q 027012          182 TKG  184 (229)
Q Consensus       182 ~~~  184 (229)
                      ++.
T Consensus       121 F~~  123 (134)
T smart00462      121 FQL  123 (134)
T ss_pred             HHH
Confidence            774

PTB/PI domain structure similar to those of pleckstrin homology (PH) and IRS-1-like PTB domains.

>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain

Probab=86.59  E-value=8.2  Score=28.39  Aligned_cols=73  Identities=14%  Similarity=0.196  Sum_probs=48.2

Q ss_pred             ceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEecc-CCcEEEEEeCCCCCeeeecCcHHHHHHHHHHH
Q 027012          109 KMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSEL-SDNFFAIIIPSEYDLLMASTRKTEIVTVLVEA  181 (229)
Q Consensus       109 K~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~-~D~~~VIhv~~e~D~ll~s~~ktElvt~L~~~  181 (229)
                      .=++|.++|++..||...... -+.+..|||+..+-...... ..+.|-|-.|+..-++|.++...|+-..+...
T Consensus        19 ~WkkrwfvL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~~k~~~F~I~~~~~~~~~f~a~s~~e~~~Wi~ai   93 (96)
T cd01260          19 KWARRWFVLKGTTLYWYRSKQDEKAEGLIFLSGFTIESAKEVKKKYAFKVCHPVYKSFYFAAETLDDLSQWVNHL   93 (96)
T ss_pred             CceeEEEEEECCEEEEECCCCCCccceEEEccCCEEEEchhcCCceEEEECCCCCcEEEEEeCCHHHHHHHHHHH
Confidence            457999999999999996544 56778899998633333222 22333343344367888888888877666543

Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet

>cd01267 CED6_AIDA1b Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain

Probab=85.59  E-value=7.9  Score=30.69  Aligned_cols=76  Identities=21%  Similarity=0.249  Sum_probs=56.2

Q ss_pred             ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCC-----CCeeeecCcH---HHHHHHHHH
Q 027012          109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSE-----YDLLMASTRK---TEIVTVLVE  180 (229)
Q Consensus       109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e-----~D~ll~s~~k---tElvt~L~~  180 (229)
                      |.++-.|.|+...|.++|+++-.+-...||..|+-.+.-+....+|..-..+.     +-.+|.|+..   .|++..|.+
T Consensus        43 k~~~V~L~IS~~gi~i~d~~t~~~l~~~~i~~ISfc~~d~~~~~~FafIa~~~~~~~~~ChvF~~~~~~~A~~I~~tig~  122 (132)
T cd01267          43 KIPKVELDISIKGVKIIDPKTKTVLHGHPLYNISCCAQDKEDLRFFAFIAKDTETNKHYCHVFCSEKLGLAEEIILTIGQ  122 (132)
T ss_pred             CCCeEEEEEEcCcEEEEeCCCCcEEEEcccceEEEEecCCCCCeEEEEEEecCCCCceEEEEEECCCHHHHHHHHHHHHH
Confidence            56677788999999999998888888889999988887655556666655432     2446667654   678888888


Q ss_pred             HHhc
Q 027012          181 ATKG  184 (229)
Q Consensus       181 ~~~~  184 (229)
                      +++.
T Consensus       123 AF~~  126 (132)
T cd01267         123 AFEL  126 (132)
T ss_pred             HHHH
Confidence            8763

Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.

>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain

Probab=84.58  E-value=16  Score=28.00  Aligned_cols=83  Identities=16%  Similarity=0.116  Sum_probs=58.6

Q ss_pred             EEEeeeEEEeCCCCceeeeEEEEecC------eEEEecCCc------ceeEEEeeccccceEEEecc--CCcEEEEEeCC
Q 027012           95 VLFADKILKFTGSGKMKRRILLITDF------AIYLVDPET------DALKRRIALAAVEKMCLSEL--SDNFFAIIIPS  160 (229)
Q Consensus        95 VlFS~~V~Kinr~gK~~~R~LiITd~------aiY~ld~~~------~klKrrIpL~~I~gVSvS~~--~D~~~VIhv~~  160 (229)
                      |+.+..+.|-   ...+.|.+||+..      .|+-.+..+      -.-++-|+|..+..|.-.+.  ..+.|.|..|+
T Consensus         2 v~k~GyL~K~---K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i~t~d   78 (101)
T cd01257           2 VRKSGYLRKQ---KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRADAKHRHLIALYTRD   78 (101)
T ss_pred             ccEEEEEeEe---cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccccccCeEEEEEeCC
Confidence            5677777775   5567799999987      577776543      34578899999988875422  23567777665


Q ss_pred             CCCeeeecCcHHHHHHHHHHH
Q 027012          161 EYDLLMASTRKTEIVTVLVEA  181 (229)
Q Consensus       161 e~D~ll~s~~ktElvt~L~~~  181 (229)
                       .-+.|.++.-.|.=.++...
T Consensus        79 -r~f~l~aese~E~~~Wi~~i   98 (101)
T cd01257          79 -EYFAVAAENEAEQDSWYQAL   98 (101)
T ss_pred             -ceEEEEeCCHHHHHHHHHHH
Confidence             68888888877776665543

Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	229
1w1g_A	151	HPDK1, 3-phosphoinositide dependent protein kinase	97.35
2cod_A	115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	95.63
2dn6_A	115	KIAA0640 protein; PH domain, structural genomics,	95.24
3a58_A	320	Exocyst complex component SEC3; protein complex, P	94.24
2i5f_A	109	Pleckstrin; PH domain, protein-inositol phosphate	93.83
1eaz_A	125	Tandem PH domain containing protein-1; lipid-bindi	93.82
2d9x_A	120	Oxysterol binding protein-related protein 11; PH d	93.72
1u5d_A	108	SKAP55, SRC kinase-associated phosphoprotein of 55	93.65
1pls_A	113	Pleckstrin homology domain; phosphorylation; NMR {	93.36
1x05_A	129	Pleckstrin; PH domain, structural genomics, NPPSFA	93.13
2dhk_A	119	TBC1 domain family member 2; PH domain, paris-1, s	93.01
1u5f_A	148	SRC-associated adaptor protein; PH domain of SKAP-	92.64
1wgq_A	109	FYVE, rhogef and PH domain containing 6; ethanol d	92.33
1x1g_A	129	Pleckstrin 2; PH domain, structural genomics, rike	92.22
2d9y_A	117	Pleckstrin homology domain-containing protein fami	92.11
1upq_A	123	PEPP1; PH domain, phosphoinositide binding, signal	91.88
1v89_A	118	Hypothetical protein KIAA0053; pleckstrin homology	91.86
2dkp_A	128	Pleckstrin homology domain-containing family A mem	91.73
3hie_A	171	Protein PSL1, exocyst complex component SEC3; PH d	91.58
3aj4_A	112	Pleckstrin homology domain-containing family B ME;	90.19
1v61_A	132	RAC/CDC42 guanine nucleotide exchange factor (GEF)	89.21
1fao_A	126	Dual adaptor of phosphotyrosine and 3- phosphoinos	89.2
2yry_A	122	Pleckstrin homology domain-containing family A mem	88.62
3rcp_A	103	Pleckstrin homology domain-containing family A ME;	88.47
1v5u_A	117	SBF1, SET binding factor 1; MTMR5, the pleckstrin	88.22
1u5e_A	211	SRC-associated adaptor protein; novel dimerization	87.48
2cof_A	107	Protein KIAA1914; PH domain, structural genomics,	87.25
2y7b_A	134	Actin-binding protein anillin; cell cycle; 1.90A {	86.75
1wg7_A	150	Dedicator of cytokinesis protein 9; pleckstrin hom	86.46
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	84.71
1v5m_A	136	SH2 and PH domain-containing adapter protein APS;	81.74
1qqg_A	264	IRS-1, insulin receptor substrate 1; beta-sandwhic	80.68
1btk_A	169	Bruton'S tyrosine kinase; transferase, PH domain,	80.67
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	80.02

>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A

Probab=97.35  E-value=0.0025  Score=51.67  Aligned_cols=88  Identities=20%  Similarity=0.249  Sum_probs=67.9

Q ss_pred             CCccEEEeeeEEEeCCCCceeeeEEEEecC-eEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeecC
Q 027012           91 GDKQVLFADKILKFTGSGKMKRRILLITDF-AIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMAST  169 (229)
Q Consensus        91 ~~e~VlFS~~V~Kinr~gK~~~R~LiITd~-aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~  169 (229)
                      .+|.|+....|.|-... ..+.|.||||+. .+|-+|+....+|..||++.  .+++-..+|..|+||+|. -.|.|...
T Consensus        48 ~ge~Ilk~G~v~KrkGl-~~kkR~liLT~~PrL~Yvdp~~~~~KGeIpls~--~l~ve~k~~~~F~I~Tp~-RtY~~~d~  123 (151)
T 1w1g_A           48 ENNLILKMGPVDKRKGL-FARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQ--ELRPEAKNFKTFFVHTPN-RTYYLMDP  123 (151)
T ss_dssp             TTCCEEEEEEEEEEETT-EEEEEEEEEETTTEEEEEETTTTEEEEEECCCT--TCEEEESSSSEEEEEETT-EEEEEECT
T ss_pred             CCCcEEEEEEEEecccC-cceeEEEEEcCCceEEEEcCccccccceEecCC--CeeEEEcCCCEEEEECCC-ceEEEEcC
Confidence            36899999999996443 357999999977 88899999999999999995  666777889899999997 56666543


Q ss_pred             --cHHHHHHHHHHHH
Q 027012          170 --RKTEIVTVLVEAT  182 (229)
Q Consensus       170 --~ktElvt~L~~~~  182 (229)
                        ...|=+..|..+.
T Consensus       124 ~~~AqeWv~aI~~~~  138 (151)
T 1w1g_A          124 SGNAHKWCRKIQEVW  138 (151)
T ss_dssp             TSCHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHH
Confidence              4455555554443

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=95.63  E-value=0.18  Score=36.88  Aligned_cols=89  Identities=17%  Similarity=0.248  Sum_probs=65.3

Q ss_pred             CCccEEEeeeEEEeCC--CCceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeee
Q 027012           91 GDKQVLFADKILKFTG--SGKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA  167 (229)
Q Consensus        91 ~~e~VlFS~~V~Kinr--~gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~  167 (229)
                      ++..++.+..+.|-..  ...-++|.++|++..|+-..... .+.+..|+|..+..|....  ++.|.|+.+ +..+.|.
T Consensus         4 ~~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~--~~~F~i~~~-~r~~~l~   80 (115)
T 2cod_A            4 GSSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG--DNKFEVVTT-QRTFVFR   80 (115)
T ss_dssp             CCSCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTEEEEEEET--TTEEEEEES-SCCEEEE
T ss_pred             CCCCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCCcccCCEEECCcceEEEeCC--CCEEEEEeC-CcEEEEE
Confidence            4567889999999765  23558999999999998876543 4678889999988776554  677778754 4688898


Q ss_pred             cCcHHHHH---HHHHHHH
Q 027012          168 STRKTEIV---TVLVEAT  182 (229)
Q Consensus       168 s~~ktElv---t~L~~~~  182 (229)
                      ++...|+-   ..|..+.
T Consensus        81 a~s~~e~~~Wi~~l~~~~   98 (115)
T 2cod_A           81 VEKEEERNDWISILLNAL   98 (115)
T ss_dssp             CSSHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence            88766654   4444444

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.24  E-value=0.56  Score=33.88  Aligned_cols=92  Identities=14%  Similarity=0.072  Sum_probs=66.1

Q ss_pred             CCccEEEeeeEEEeCCC-CceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEeccCC---cEEEEEeCCCCCee
Q 027012           91 GDKQVLFADKILKFTGS-GKMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSELSD---NFFAIIIPSEYDLL  165 (229)
Q Consensus        91 ~~e~VlFS~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~~~D---~~~VIhv~~e~D~l  165 (229)
                      +.+.++.+..+.|-... ..-++|.++|++..|+..... ..+.+..|+|..+..|...+..+   +.|.|+.+ +.-+.
T Consensus         4 ~~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~-~r~~~   82 (115)
T 2dn6_A            4 GSSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDKDGKKCLFLVKCF-DKTFE   82 (115)
T ss_dssp             CCCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTTCSSEEEEECCCTTCEEEEECCCTTCCSEEEEECS-SCEEE
T ss_pred             CCCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCCCcccCcEEEecCcEEEEECCCCCCCeeEEEEEeC-CCEEE
Confidence            45778889999997753 345899999999999888753 35678889999988887764433   46777765 46788


Q ss_pred             eecCcHHHHH---HHHHHHHh
Q 027012          166 MASTRKTEIV---TVLVEATK  183 (229)
Q Consensus       166 l~s~~ktElv---t~L~~~~~  183 (229)
                      |.++...|.-   ..|..+..
T Consensus        83 l~a~s~~e~~~Wi~ai~~~~~  103 (115)
T 2dn6_A           83 ISASDKKKKQEWIQAIHSTIH  103 (115)
T ss_dssp             EECSSHHHHHHHHHHHHHHHH
T ss_pred             EEcCCHHHHHHHHHHHHHHHH
Confidence            8887766654   44444443

>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}

Probab=94.24  E-value=0.84  Score=40.70  Aligned_cols=107  Identities=10%  Similarity=0.119  Sum_probs=76.7

Q ss_pred             HHHHHhhcC------CccEEEeeeEEEeCCC-----------CceeeeEEEEecCe-----EEEecC-----CcceeEEE
Q 027012           83 LMKILQKQG------DKQVLFADKILKFTGS-----------GKMKRRILLITDFA-----IYLVDP-----ETDALKRR  135 (229)
Q Consensus        83 ~~~l~~k~~------~e~VlFS~~V~Kinr~-----------gK~~~R~LiITd~a-----iY~ld~-----~~~klKrr  135 (229)
                      +..++++..      .|..+=-+.|.+.-..           ++..+|+|+|+-..     +++-..     ..|++.+.
T Consensus        90 i~scFsk~D~~~G~~~ErYITHVrV~Eds~~ps~pPp~~s~~kkKK~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsIGKT  169 (320)
T 3a58_A           90 INCCFSRPDHKTGEPPNNYITHVRIIEDSKFPSSRPPPDSKLENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRT  169 (320)
T ss_dssp             HHHHSSSCCSSSSCCCCEEEEEEEEEEESSSTTSCCCTTCCGGGEEEEEEEEEECSSCTTCEEEEEEEECGGGCEEEEEE
T ss_pred             HHHHcCccccccCcccceEEEEEEEEecccCCCCCCCcccCccccCceEEEEEEecCCCceEEEEEEEecCCCceEecce
Confidence            345665532      2777778889997665           58889999986665     444422     35999999


Q ss_pred             eeccccceEEEeccCCcEEEEEeCCCCCeeeecCc---HHHHHHHHHHHHhccCC-CeeE
Q 027012          136 IALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTR---KTEIVTVLVEATKGASE-ELEV  191 (229)
Q Consensus       136 IpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~~---ktElvt~L~~~~~~~~~-~L~V  191 (229)
                      -+|.+|..|.--...+.-|+|++  +-+|.-++..   +.-|+..|.+.|.+-++ .+|.
T Consensus       170 W~L~ELk~Id~~~~~~~gF~LTl--~K~YyW~A~s~kER~~FI~sLvKiy~KYtgGk~P~  227 (320)
T 3a58_A          170 WQLTELVRVEKDLEISEGFILTM--SKKYYWETNSAKERTVFIKSLITLYIQTFEGHVPE  227 (320)
T ss_dssp             EEGGGCCEEEECSSCTTEEEEES--SSEEEEEESSHHHHHHHHHHHHHHHHHHTTTCBCE
T ss_pred             echhhhhhhhcccCCCCceEEEe--CCceEEecCCHHHHHHHHHHHHHHHHHHcCCCCCe
Confidence            99999999994345556678998  4577777644   34499999999998775 5553

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A

Probab=93.83  E-value=1.2  Score=31.66  Aligned_cols=89  Identities=16%  Similarity=0.192  Sum_probs=63.0

Q ss_pred             CccEEEeeeEEEeCCC-CceeeeEEEEecC--eEEEecCC-cceeEEEeeccccceEEEecc-------CCcEEEEEeCC
Q 027012           92 DKQVLFADKILKFTGS-GKMKRRILLITDF--AIYLVDPE-TDALKRRIALAAVEKMCLSEL-------SDNFFAIIIPS  160 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd~--aiY~ld~~-~~klKrrIpL~~I~gVSvS~~-------~D~~~VIhv~~  160 (229)
                      .+.++.+..+.|-... ..-++|.++|++.  .|+-.+.. ....+..|+|....-+.+...       ..+.|.|..++
T Consensus         4 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~   83 (109)
T 2i5f_A            4 TGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITAD   83 (109)
T ss_dssp             CCCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEECTT
T ss_pred             cCceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCC
Confidence            3678899999997653 3458999999986  78777543 356788899998644444332       45677788776


Q ss_pred             CCCeeeecCcHHHHHHHHHH
Q 027012          161 EYDLLMASTRKTEIVTVLVE  180 (229)
Q Consensus       161 e~D~ll~s~~ktElvt~L~~  180 (229)
                      ...+.|.++...|+-..+..
T Consensus        84 ~~~~~l~a~s~~e~~~Wi~a  103 (109)
T 2i5f_A           84 EVHYFLQAATPKERTEWIKA  103 (109)
T ss_dssp             CCEEEEECSSHHHHHHHHHH
T ss_pred             CCEEEEEcCCHHHHHHHHHH
Confidence            55689988888877666544

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1

Probab=93.82  E-value=1.1  Score=32.84  Aligned_cols=91  Identities=22%  Similarity=0.261  Sum_probs=65.2

Q ss_pred             CccEEEeeeEEEeCCC-CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEec-----cCCcEEEEEeCCCCCe
Q 027012           92 DKQVLFADKILKFTGS-GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSE-----LSDNFFAIIIPSEYDL  164 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~-----~~D~~~VIhv~~e~D~  164 (229)
                      +..++.+..+.|-... ..-++|.++|++..||...... .+.+..|+|..+..|....     .....|.|..+ +..+
T Consensus        11 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~-~r~~   89 (125)
T 1eaz_A           11 DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTT-SRTF   89 (125)
T ss_dssp             -CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECS-SCEE
T ss_pred             CCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEEeC-CcEE
Confidence            4678889999998653 3458999999999998886543 5678889999998887632     34566777755 4678


Q ss_pred             eeecCcHHHHHH---HHHHHHh
Q 027012          165 LMASTRKTEIVT---VLVEATK  183 (229)
Q Consensus       165 ll~s~~ktElvt---~L~~~~~  183 (229)
                      .|.++...|+-.   .|..+..
T Consensus        90 ~l~a~s~~e~~~W~~al~~~i~  111 (125)
T 1eaz_A           90 YVQADSPEEMHSWIKAVSGAIV  111 (125)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCHHHHHHHHHHHHHHHH
Confidence            888877666554   4444443

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.72  E-value=0.52  Score=34.85  Aligned_cols=87  Identities=14%  Similarity=0.129  Sum_probs=60.4

Q ss_pred             CCccEEEeeeEEEeCCC-CceeeeEEEEe--cCeEEEecCCc---ceeEEEeeccccceEEEeccCCcEEEEEeCCCCCe
Q 027012           91 GDKQVLFADKILKFTGS-GKMKRRILLIT--DFAIYLVDPET---DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDL  164 (229)
Q Consensus        91 ~~e~VlFS~~V~Kinr~-gK~~~R~LiIT--d~aiY~ld~~~---~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~  164 (229)
                      +.+.+.++....|-... ..-++|.++|+  +..|+-.....   .+.+-.|+|..+. |.........|.|..++..-+
T Consensus         4 ~~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~-v~~~~~~~~~F~i~~~~~r~~   82 (120)
T 2d9x_A            4 GSSGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAV-ISPSDEDSHTFTVNAASGEQY   82 (120)
T ss_dssp             CCSCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCC-EECCSSSSSCEEECCSSSCCE
T ss_pred             CCCCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcccCCCccceEEcceEE-EEecCCCCCEEEEEcCCCCEE
Confidence            45678888888887653 35589999998  46776665433   3667889999975 665554556677777765678


Q ss_pred             eeecCcHHHHHHHH
Q 027012          165 LMASTRKTEIVTVL  178 (229)
Q Consensus       165 ll~s~~ktElvt~L  178 (229)
                      .|.++...|.-.++
T Consensus        83 ~l~a~s~~e~~~Wi   96 (120)
T 2d9x_A           83 KLRATDAKERQHWV   96 (120)
T ss_dssp             EECCSSHHHHHHHH
T ss_pred             EEECCCHHHHHHHH
Confidence            88887766654443

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1

Probab=93.65  E-value=1.1  Score=31.70  Aligned_cols=87  Identities=10%  Similarity=0.081  Sum_probs=60.5

Q ss_pred             ccEEEeeeEEEeCCC-----CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEe-----ccCCcEEEEEeCCC
Q 027012           93 KQVLFADKILKFTGS-----GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLS-----ELSDNFFAIIIPSE  161 (229)
Q Consensus        93 e~VlFS~~V~Kinr~-----gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS-----~~~D~~~VIhv~~e  161 (229)
                      +.|+.+..+.|-...     ..-++|.++|++..||...... .+.+..|+|..+.-+.+.     ......|.|..++.
T Consensus         1 g~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~   80 (108)
T 1u5d_A            1 GSVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDR   80 (108)
T ss_dssp             CCEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSS
T ss_pred             CCccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCCCCCCEEEEecceEEEeCCccccccCCcceEEEEcCCC
Confidence            357788888887653     3448999999999998887543 456788999998743331     12235677777765


Q ss_pred             CCeeeecCcHHHHHHHHH
Q 027012          162 YDLLMASTRKTEIVTVLV  179 (229)
Q Consensus       162 ~D~ll~s~~ktElvt~L~  179 (229)
                      .-+.|.++...|.-..+.
T Consensus        81 r~~~l~a~s~~e~~~Wi~   98 (108)
T 1u5d_A           81 RTYEFTATSPAEARDWVD   98 (108)
T ss_dssp             CCEEEECSSHHHHHHHHH
T ss_pred             cEEEEECCCHHHHHHHHH
Confidence            778898887766655443

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=93.36  E-value=0.98  Score=32.65  Aligned_cols=87  Identities=11%  Similarity=0.056  Sum_probs=61.5

Q ss_pred             CccEEEeeeEEEeCCC-CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEE-e--ccCCcEEEEEeCCCCCeee
Q 027012           92 DKQVLFADKILKFTGS-GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCL-S--ELSDNFFAIIIPSEYDLLM  166 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSv-S--~~~D~~~VIhv~~e~D~ll  166 (229)
                      +..++++..+.|-... ..-++|.++|++..||-..... .+.+..|+|..+..+.. .  ....+.|.|..++..-+.|
T Consensus         2 e~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l   81 (113)
T 1pls_A            2 EPKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFF   81 (113)
T ss_dssp             CCCCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEE
T ss_pred             CCCCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCCCCCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEE
Confidence            3567888899888653 3458999999999998887543 56788899999876542 1  2233467777776567888


Q ss_pred             ecCcHHHHHHHH
Q 027012          167 ASTRKTEIVTVL  178 (229)
Q Consensus       167 ~s~~ktElvt~L  178 (229)
                      .++...|+-.++
T Consensus        82 ~a~s~~e~~~Wi   93 (113)
T 1pls_A           82 QAAFLEERDAWV   93 (113)
T ss_dssp             ECSSHHHHHHHH
T ss_pred             ECCCHHHHHHHH
Confidence            887766654443

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A

Probab=93.13  E-value=1.9  Score=31.79  Aligned_cols=90  Identities=16%  Similarity=0.186  Sum_probs=62.5

Q ss_pred             CccEEEeeeEEEeCCC-CceeeeEEEEecC--eEEEecCC-cceeEEEeeccccceEEEecc-------CCcEEEEEeCC
Q 027012           92 DKQVLFADKILKFTGS-GKMKRRILLITDF--AIYLVDPE-TDALKRRIALAAVEKMCLSEL-------SDNFFAIIIPS  160 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd~--aiY~ld~~-~~klKrrIpL~~I~gVSvS~~-------~D~~~VIhv~~  160 (229)
                      .+.++.+..+.|-... ..-++|.++|++.  .||-.+.. ..+.+..|+|....-+.+...       ....|.|..+.
T Consensus        15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~   94 (129)
T 1x05_A           15 RGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITAD   94 (129)
T ss_dssp             CSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTT
T ss_pred             cCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCC
Confidence            4678999999996653 2347999999986  67777543 456788899998654444333       34677888776


Q ss_pred             CCCeeeecCcHHHHHHHHHHH
Q 027012          161 EYDLLMASTRKTEIVTVLVEA  181 (229)
Q Consensus       161 e~D~ll~s~~ktElvt~L~~~  181 (229)
                      ..-+.|.++...|+-.++...
T Consensus        95 ~~~~~l~a~s~~e~~~Wi~al  115 (129)
T 1x05_A           95 EVHYFLQAATPKERTEWIKAI  115 (129)
T ss_dssp             CCCCEEECSSHHHHHHHHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHH
Confidence            566888888777765554433

>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.01  E-value=1.2  Score=32.82  Aligned_cols=87  Identities=17%  Similarity=0.270  Sum_probs=62.2

Q ss_pred             CccEEEeeeEEEeCCCC---ceeeeEEEEecC--eEEEecCCc-ceeEEEeeccccceEEEeccCCcEEEEEeCCCCCee
Q 027012           92 DKQVLFADKILKFTGSG---KMKRRILLITDF--AIYLVDPET-DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLL  165 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~g---K~~~R~LiITd~--aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~l  165 (229)
                      .+.+.++....|-...+   .-+.|.++|++.  .||-..... .+.+-.|+|..+..+.......+.|.|+.+ +..+.
T Consensus         5 ~~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~~~~~~~~F~i~~~-~r~~~   83 (119)
T 2dhk_A            5 SSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCKADAEEGIFEIKTP-SRVIT   83 (119)
T ss_dssp             CSCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEECTTGGGCEEEEECS-SCCEE
T ss_pred             CCCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCCcccccEEECCCCEEEecCCCCCCEEEEEeC-CcEEE
Confidence            35677888888877522   337899999998  787775433 467888999998766544445567788876 57888


Q ss_pred             eecCcHHHHHHHHH
Q 027012          166 MASTRKTEIVTVLV  179 (229)
Q Consensus       166 l~s~~ktElvt~L~  179 (229)
                      |.++...|+-.++.
T Consensus        84 l~a~s~~e~~~Wi~   97 (119)
T 2dhk_A           84 LKAATKQAMLYWLQ   97 (119)
T ss_dssp             EECSSHHHHHHHHH
T ss_pred             EECCCHHHHHHHHH
Confidence            98887777654443

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A

Probab=92.64  E-value=2.3  Score=32.43  Aligned_cols=89  Identities=12%  Similarity=0.118  Sum_probs=63.1

Q ss_pred             ccEEEeeeEEEeCCCC-----ceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEe-----ccCCcEEEEEeCCC
Q 027012           93 KQVLFADKILKFTGSG-----KMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLS-----ELSDNFFAIIIPSE  161 (229)
Q Consensus        93 e~VlFS~~V~Kinr~g-----K~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS-----~~~D~~~VIhv~~e  161 (229)
                      ..++.+..+.|-....     .-++|.++|++..||-..... .+.+..|+|..++-+.+.     ......|.|..++.
T Consensus        15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~   94 (148)
T 1u5f_A           15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK   94 (148)
T ss_dssp             SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTS
T ss_pred             CCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCCcccceEEEcCCcEEEECCCcccCCCCccEEEEECCCC
Confidence            6788999999987642     458999999999998886543 466888999988533321     11235677777665


Q ss_pred             CCeeeecCcHHHHHHHHHHH
Q 027012          162 YDLLMASTRKTEIVTVLVEA  181 (229)
Q Consensus       162 ~D~ll~s~~ktElvt~L~~~  181 (229)
                      .-+.|.++...|+-.++...
T Consensus        95 r~~~l~a~s~~e~~~Wi~al  114 (148)
T 1u5f_A           95 RIYQFTAASPKDAEEWVQQL  114 (148)
T ss_dssp             CEEEEECSSHHHHHHHHHHH
T ss_pred             cEEEEECCCHHHHHHHHHHH
Confidence            67889888777766555443

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=92.33  E-value=1.9  Score=30.94  Aligned_cols=90  Identities=9%  Similarity=0.072  Sum_probs=63.7

Q ss_pred             CccEEEeeeEEEeCCC-CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccC--CcEEEEEeCCCCCeeee
Q 027012           92 DKQVLFADKILKFTGS-GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELS--DNFFAIIIPSEYDLLMA  167 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~--D~~~VIhv~~e~D~ll~  167 (229)
                      .+.++++....|-... ..=++|.++|++..||...... .+.+..|+|..+..+......  ...|.|..++..-+.|.
T Consensus         5 ~~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~   84 (109)
T 1wgq_A            5 SSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFK   84 (109)
T ss_dssp             CCSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTCSSCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEE
T ss_pred             CCCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCcCccCceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEE
Confidence            4677888888887553 3458999999999998886543 566788999998777665432  24566665544458888


Q ss_pred             cCcHHHHHHHHHHH
Q 027012          168 STRKTEIVTVLVEA  181 (229)
Q Consensus       168 s~~ktElvt~L~~~  181 (229)
                      ++...|+-..+...
T Consensus        85 a~s~~e~~~Wi~al   98 (109)
T 1wgq_A           85 ADDAHSTQRWIDAF   98 (109)
T ss_dssp             CSSHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHH
Confidence            88877776665543

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=92.22  E-value=2.2  Score=31.40  Aligned_cols=90  Identities=14%  Similarity=0.157  Sum_probs=62.7

Q ss_pred             CccEEEeeeEEEeCCC-CceeeeEEEEec--CeEEEecCC--cceeEEEeeccccceEEEecc----------CCcEEEE
Q 027012           92 DKQVLFADKILKFTGS-GKMKRRILLITD--FAIYLVDPE--TDALKRRIALAAVEKMCLSEL----------SDNFFAI  156 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd--~aiY~ld~~--~~klKrrIpL~~I~gVSvS~~----------~D~~~VI  156 (229)
                      ...|+.+..+.|-... ..-++|.++|++  ..||-.+..  ..+.+..|+|....-+.+...          ....|.|
T Consensus        15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I   94 (129)
T 1x1g_A           15 SGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKV   94 (129)
T ss_dssp             CSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEE
T ss_pred             CCCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEE
Confidence            3678999999998763 345899999993  577777653  456677899987544444433          3456777


Q ss_pred             EeCCCCCeeeecCcHHHHHHHHHHH
Q 027012          157 IIPSEYDLLMASTRKTEIVTVLVEA  181 (229)
Q Consensus       157 hv~~e~D~ll~s~~ktElvt~L~~~  181 (229)
                      ..++..-+.|.++...|.-.++...
T Consensus        95 ~~~~~r~~~l~a~s~~e~~~Wi~al  119 (129)
T 1x1g_A           95 ITKDDTHYYIQASSKAERAEWIEAI  119 (129)
T ss_dssp             CCTTCCCEEECCSSHHHHHHHHHHH
T ss_pred             EcCCCCEEEEEcCCHHHHHHHHHHH
Confidence            7776557889888877776665543

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.11  E-value=2.4  Score=30.45  Aligned_cols=92  Identities=11%  Similarity=0.144  Sum_probs=64.3

Q ss_pred             CccEEEeeeEEEeCC--CCceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEec----cCCcEEEEEeCCCCCe
Q 027012           92 DKQVLFADKILKFTG--SGKMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSE----LSDNFFAIIIPSEYDL  164 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr--~gK~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~----~~D~~~VIhv~~e~D~  164 (229)
                      ++.|+.+..+.|-..  ...-++|.++|++..||..... ..+.+..|+|..+.-..+.+    .....|.|..++...+
T Consensus         8 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~   87 (117)
T 2d9y_A            8 NAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTY   87 (117)
T ss_dssp             SCCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTTCCSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEE
T ss_pred             CCCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCCCCCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEE
Confidence            467899999999863  3355899999999999888643 35678889999875222222    1223566655666789


Q ss_pred             eeecCcHHHHHHHHHHHHh
Q 027012          165 LMASTRKTEIVTVLVEATK  183 (229)
Q Consensus       165 ll~s~~ktElvt~L~~~~~  183 (229)
                      .|.++...|.-.++...-.
T Consensus        88 ~l~a~s~~e~~~Wi~al~~  106 (117)
T 2d9y_A           88 FFSAESPEEQEAWIQAMGE  106 (117)
T ss_dssp             EEECSSHHHHHHHHHHHHH
T ss_pred             EEEcCCHHHHHHHHHHHHH
Confidence            9999888877766655443

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*

Probab=91.88  E-value=2.7  Score=30.53  Aligned_cols=91  Identities=11%  Similarity=0.100  Sum_probs=62.2

Q ss_pred             CCccEEEeeeEEEeCC--CCceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEec-c----CCcEEEEEeCCCC
Q 027012           91 GDKQVLFADKILKFTG--SGKMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSE-L----SDNFFAIIIPSEY  162 (229)
Q Consensus        91 ~~e~VlFS~~V~Kinr--~gK~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~-~----~D~~~VIhv~~e~  162 (229)
                      .+..|+.+..+.|-..  ...-++|.++|++..||-.... ..+.+..|+|..+. |.... .    ....|.|..++..
T Consensus         7 p~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~-v~~~~~~~~~~~~~~f~i~~~~~r   85 (123)
T 1upq_A            7 PNLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYN-IRPDGPGAPRGRRFTFTAEHPGMR   85 (123)
T ss_dssp             TTSCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGGCE-EEECCSSCTTSSSSEEEEECTTSC
T ss_pred             CCCCceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCCCcccceEEECCCCE-EEECCCCccCCCcEEEEEECCCCe
Confidence            3467999999999864  2345899999999999888543 35667889988864 33321 1    2234455556557


Q ss_pred             CeeeecCcHHHHHHHHHHHH
Q 027012          163 DLLMASTRKTEIVTVLVEAT  182 (229)
Q Consensus       163 D~ll~s~~ktElvt~L~~~~  182 (229)
                      -++|.++...|+-.++...-
T Consensus        86 ~~~l~a~s~~e~~~Wi~al~  105 (123)
T 1upq_A           86 TYVLAADTLEDLRGWLRALG  105 (123)
T ss_dssp             CEEEECSSHHHHHHHHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHH
Confidence            88998888777766655443

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=91.86  E-value=2.6  Score=30.21  Aligned_cols=89  Identities=10%  Similarity=0.100  Sum_probs=62.7

Q ss_pred             CccEEEeeeEEEeCCC-CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEecc----CCcEEEEEeC------
Q 027012           92 DKQVLFADKILKFTGS-GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSEL----SDNFFAIIIP------  159 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~----~D~~~VIhv~------  159 (229)
                      .+.++.+..+.|-... ..-++|.++|++..||-..... .+.+..|+|....-+.+.+.    ....|.|..+      
T Consensus         5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~   84 (118)
T 1v89_A            5 SSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNR   84 (118)
T ss_dssp             SSCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCC
T ss_pred             CCCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCCCCCceEEEECCCCEEEEcCcCcccCCcceEEEECCcccccc
Confidence            4678899999998753 3458999999999998886543 46678899998866655432    1335666653      


Q ss_pred             -CCCCeeeecCcHHHHHHHHHH
Q 027012          160 -SEYDLLMASTRKTEIVTVLVE  180 (229)
Q Consensus       160 -~e~D~ll~s~~ktElvt~L~~  180 (229)
                       ...-+.|.++...|+-.++..
T Consensus        85 ~~~~~~~l~a~s~~e~~~Wi~a  106 (118)
T 1v89_A           85 MGQDSYVLMASSQAEMEEWVKF  106 (118)
T ss_dssp             SSCCCEEEECSSHHHHHHHHHH
T ss_pred             CCCcEEEEECCCHHHHHHHHHH
Confidence             456788888877776555443

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}

Probab=91.73  E-value=2.9  Score=30.58  Aligned_cols=89  Identities=13%  Similarity=0.200  Sum_probs=63.6

Q ss_pred             CccEEEeeeEEEeCC--CCceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEec-----cCCcEEEEEeCCCCC
Q 027012           92 DKQVLFADKILKFTG--SGKMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSE-----LSDNFFAIIIPSEYD  163 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr--~gK~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~-----~~D~~~VIhv~~e~D  163 (229)
                      ++.|+.+..+.|-..  ...-++|.++|++..||..... ....+..|+|..+. |....     .....|.|..++...
T Consensus        18 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~~~~~~~~~~~~F~i~~~~~r~   96 (128)
T 2dkp_A           18 NAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQ-IALLTSEDHINRKYAFKAAHPNMRT   96 (128)
T ss_dssp             TSCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCCSEEEEECGGGSE-EEECCGGGCCSSCSEEEEECSSSCC
T ss_pred             CCCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCCcccceEEEcCceE-EEEcCCcccCCCCeEEEEEcCCCCE
Confidence            467889999988865  2355899999999999888643 35678889998764 33322     223466777676678


Q ss_pred             eeeecCcHHHHHHHHHHH
Q 027012          164 LLMASTRKTEIVTVLVEA  181 (229)
Q Consensus       164 ~ll~s~~ktElvt~L~~~  181 (229)
                      +.|.++...|+-.++...
T Consensus        97 ~~l~a~s~~e~~~Wi~al  114 (128)
T 2dkp_A           97 YYFCTDTGKEMELWMKAM  114 (128)
T ss_dssp             EEEECSSHHHHHHHHHHH
T ss_pred             EEEEcCCHHHHHHHHHHH
Confidence            999998877776665544

>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}

Probab=91.58  E-value=1.2  Score=36.47  Aligned_cols=84  Identities=13%  Similarity=0.161  Sum_probs=61.8

Q ss_pred             CceeeeEEEEecCe-----E--EEecC---CcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeecC---cHHHH
Q 027012          108 GKMKRRILLITDFA-----I--YLVDP---ETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMAST---RKTEI  174 (229)
Q Consensus       108 gK~~~R~LiITd~a-----i--Y~ld~---~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~---~ktEl  174 (229)
                      +...+|+|+|+-.+     +  |+...   ..|++.+.-+|.+|+.|..-+..+.-|.|++.  -.|.-++.   .+.-|
T Consensus        62 ~~KK~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~~~~~gF~ltl~--K~Y~W~a~s~~Er~~F  139 (171)
T 3hie_A           62 ENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLEISEGFILTMS--KKYYWETNSAKERTVF  139 (171)
T ss_dssp             GGEEEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECSSCTTEEEEESS--SEEEEECSSHHHHHHH
T ss_pred             CCccceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccCCCCCcEEEEeC--CeEEEecCCHHHHHHH
Confidence            56789999985443     3  44422   35999999999999999986656666789983  57777664   34559


Q ss_pred             HHHHHHHHhccCC-Cee--EEE
Q 027012          175 VTVLVEATKGASE-ELE--VAF  193 (229)
Q Consensus       175 vt~L~~~~~~~~~-~L~--V~~  193 (229)
                      +..|.+.|.+-++ ..|  ++|
T Consensus       140 I~sL~K~y~ky~~G~~P~l~n~  161 (171)
T 3hie_A          140 IKSLITLYIQTFEGHVPELVNW  161 (171)
T ss_dssp             HHHHHHHHHHTSCSSCCTTEEE
T ss_pred             HHHHHHHHHHHcCCCCCeEecc
Confidence            9999999998774 544  455

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A

Probab=90.19  E-value=3.4  Score=29.61  Aligned_cols=90  Identities=7%  Similarity=0.096  Sum_probs=60.4

Q ss_pred             CccEEEeeeEEEeCC-CCceeeeEEEE-ecCeEEEecCC-cceeEEEeeccccc-------eEE---EeccC--CcEEEE
Q 027012           92 DKQVLFADKILKFTG-SGKMKRRILLI-TDFAIYLVDPE-TDALKRRIALAAVE-------KMC---LSELS--DNFFAI  156 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr-~gK~~~R~LiI-Td~aiY~ld~~-~~klKrrIpL~~I~-------gVS---vS~~~--D~~~VI  156 (229)
                      .-.|+.+..+.|-.. ...-++|.++| ++..|+-.... ..+.+..|+|....       .|.   .....  ...|.|
T Consensus         2 ~~~~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i   81 (112)
T 3aj4_A            2 SMAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQI   81 (112)
T ss_dssp             CCSCSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEE
T ss_pred             CcceeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCCcCcEEEE
Confidence            345778888888765 33458999999 88888666543 35667778877532       222   22222  236777


Q ss_pred             EeCCCCCeeeecCcHHHHHHHHHHH
Q 027012          157 IIPSEYDLLMASTRKTEIVTVLVEA  181 (229)
Q Consensus       157 hv~~e~D~ll~s~~ktElvt~L~~~  181 (229)
                      ..++..-+.|.++...|+-.++...
T Consensus        82 ~~~~~r~~~l~a~s~~e~~~Wi~al  106 (112)
T 3aj4_A           82 VCRDGKTISLCAESTDDCLAWKFTL  106 (112)
T ss_dssp             EETTSCEEEEECSSHHHHHHHHHHH
T ss_pred             EecCCcEEEEEeCCHHHHHHHHHHH
Confidence            7776678999998888887776544

>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=89.21  E-value=2.5  Score=32.95  Aligned_cols=86  Identities=12%  Similarity=0.260  Sum_probs=59.3

Q ss_pred             ccEEEeeeEEEeCC-CCceeeeEEEEecCeEEEecCC----cceeEEEeeccccceEEEeccCCc-----EEEEEeCCCC
Q 027012           93 KQVLFADKILKFTG-SGKMKRRILLITDFAIYLVDPE----TDALKRRIALAAVEKMCLSELSDN-----FFAIIIPSEY  162 (229)
Q Consensus        93 e~VlFS~~V~Kinr-~gK~~~R~LiITd~aiY~ld~~----~~klKrrIpL~~I~gVSvS~~~D~-----~~VIhv~~e~  162 (229)
                      ..|++...|.--+- ....++|.|+|-+..|+.+.+.    .|+++-++||..|   +|....|.     -|-|-=+...
T Consensus        26 G~ii~~s~v~~~~~~~~~~~eR~l~LF~~~Ll~~s~~~~~~~f~~kgklPL~g~---~V~~~ed~~~~~~aFeI~g~~~~  102 (132)
T 1v61_A           26 GNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGM---VVNRLDEIEGSDCMFEITGSTVE  102 (132)
T ss_dssp             CCCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTC---BCSTTCSSSSSCCCEEEECSSSC
T ss_pred             CCeEEEeeEEEEEcccCcceEEEEEEcCCeEEEEEecCCCceEEEEEEEeccee---EEEeccccccCccEEEEecCCCc
Confidence            46777777776553 4577899999999999888652    5899999999866   45555442     4444433335


Q ss_pred             CeeeecCcHHHHHHHHHHH
Q 027012          163 DLLMASTRKTEIVTVLVEA  181 (229)
Q Consensus       163 D~ll~s~~ktElvt~L~~~  181 (229)
                      -+++.|....|.-.+|...
T Consensus       103 ~i~v~~~s~eE~~~Wl~~L  121 (132)
T 1v61_A          103 RIVVHCNNNQDFQEWMEQL  121 (132)
T ss_dssp             EEEECCCCSHHHHHHHHHH
T ss_pred             eEEEEeCCHHHHHHHHHHH
Confidence            6777887777766655443

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A

Probab=89.20  E-value=5.1  Score=29.27  Aligned_cols=91  Identities=12%  Similarity=0.088  Sum_probs=64.8

Q ss_pred             CccEEEeeeEEEeCC-CCceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEecc--CCcEEEEEeCCCCCeeee
Q 027012           92 DKQVLFADKILKFTG-SGKMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSEL--SDNFFAIIIPSEYDLLMA  167 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr-~gK~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~~--~D~~~VIhv~~e~D~ll~  167 (229)
                      ...++.+..+.|-.. ...-++|.++|++..||..... ..+.+..|+|..+..|.....  ..+.|.|..+ +.-+.|.
T Consensus        15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~-~r~~~l~   93 (126)
T 1fao_A           15 PSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFP-FRTFYLC   93 (126)
T ss_dssp             CCTTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEEET-TEEEEEE
T ss_pred             CCCccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCCCCCceeEEEccceEEEEecccCCCCCEEEEEeC-CcEEEEE
Confidence            456788888888765 3355899999999999888643 356788899999988877643  2346677765 4678888


Q ss_pred             cCcHHHHHH---HHHHHHh
Q 027012          168 STRKTEIVT---VLVEATK  183 (229)
Q Consensus       168 s~~ktElvt---~L~~~~~  183 (229)
                      ++...|.-.   .|..+..
T Consensus        94 a~s~~e~~~Wi~al~~~i~  112 (126)
T 1fao_A           94 AKTGVEADEWIKILRWKLS  112 (126)
T ss_dssp             CSSHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHH
Confidence            877666544   4444444

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=88.62  E-value=5.4  Score=28.81  Aligned_cols=90  Identities=10%  Similarity=0.138  Sum_probs=62.4

Q ss_pred             CccEEEeeeEEEeCC--CCceeeeEEEEecCeEEEecC-CcceeEEEeeccccceEEEec----cCCcEEEEEeCCCCCe
Q 027012           92 DKQVLFADKILKFTG--SGKMKRRILLITDFAIYLVDP-ETDALKRRIALAAVEKMCLSE----LSDNFFAIIIPSEYDL  164 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr--~gK~~~R~LiITd~aiY~ld~-~~~klKrrIpL~~I~gVSvS~----~~D~~~VIhv~~e~D~  164 (229)
                      ++.++.+..+.|-..  ...-++|.++|++..||.... .....+..|+|..+.-..+.+    .....|.|..++..-+
T Consensus        19 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~   98 (122)
T 2yry_A           19 NAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTY   98 (122)
T ss_dssp             TCCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEE
T ss_pred             CCCccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCCCCCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEE
Confidence            467899999999863  335589999999999988854 335678889999876222222    1223566655666788


Q ss_pred             eeecCcHHHHHHHHHHH
Q 027012          165 LMASTRKTEIVTVLVEA  181 (229)
Q Consensus       165 ll~s~~ktElvt~L~~~  181 (229)
                      .|.++...|+-.++...
T Consensus        99 ~l~a~s~~e~~~Wi~al  115 (122)
T 2yry_A           99 FFSAESPEEQEAWIQAM  115 (122)
T ss_dssp             EEECSSHHHHHHHHHHH
T ss_pred             EEEcCCHHHHHHHHHHH
Confidence            99988877776655543

>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A

Probab=88.47  E-value=4.9  Score=28.21  Aligned_cols=83  Identities=18%  Similarity=0.239  Sum_probs=58.2

Q ss_pred             eeEEEeCCC-CceeeeEEEEecCeEEEecCCc---ceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeecCcHHHH
Q 027012           99 DKILKFTGS-GKMKRRILLITDFAIYLVDPET---DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEI  174 (229)
Q Consensus        99 ~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~~---~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~~ktEl  174 (229)
                      ....|-... ..-++|.++|++..||-.+...   ...+-.|+|.. ..|...+..+.-|.|..+++.-+.|.++...|.
T Consensus         3 G~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~-~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~   81 (103)
T 3rcp_A            3 GVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAV-CEIKVHSADNTRMELIIPGEQHFYMKAVNAAER   81 (103)
T ss_dssp             EEEEEECCTTTCEEEEEEEEETTEEEEESSCC---CCCSCEEEGGG-CEEECCTTCSSEEEEEETTTEEEEEECSSHHHH
T ss_pred             eEEEEccCCCCCeeceEEEEECCEEEEEecCCcccCCcccEEEeee-eEEEEcCCCCceEEEEeCCCCEEEEECCCHHHH
Confidence            345555542 3458899999999998887543   23567799963 355555556667778877667889988888888


Q ss_pred             HHHHHHHH
Q 027012          175 VTVLVEAT  182 (229)
Q Consensus       175 vt~L~~~~  182 (229)
                      -..+...-
T Consensus        82 ~~Wi~al~   89 (103)
T 3rcp_A           82 QRWLVALG   89 (103)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            77765543

>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1

Probab=88.22  E-value=5.5  Score=28.45  Aligned_cols=91  Identities=13%  Similarity=0.093  Sum_probs=64.7

Q ss_pred             CccEEEeeeEEEeCCC-CceeeeEEEEe--cCeEEEecCCc-ceeEEEeeccccceEEEec---------cCCcEEEEEe
Q 027012           92 DKQVLFADKILKFTGS-GKMKRRILLIT--DFAIYLVDPET-DALKRRIALAAVEKMCLSE---------LSDNFFAIII  158 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~-gK~~~R~LiIT--d~aiY~ld~~~-~klKrrIpL~~I~gVSvS~---------~~D~~~VIhv  158 (229)
                      .+.++++..+.|-... ..-++|.++|+  +..||-..... .+.+..|+|..+..|....         .....|.|+.
T Consensus         5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~   84 (117)
T 1v5u_A            5 SSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKT   84 (117)
T ss_dssp             CCSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEE
T ss_pred             cCCccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecCccccccccCCCCeEEEEEC
Confidence            4677888999887653 34589999999  77888776433 5677889999998777532         1124667765


Q ss_pred             CCCCCeeeecCcHHHHHHHHHHHHh
Q 027012          159 PSEYDLLMASTRKTEIVTVLVEATK  183 (229)
Q Consensus       159 ~~e~D~ll~s~~ktElvt~L~~~~~  183 (229)
                      + +.-+.|.++...|+-.++...-.
T Consensus        85 ~-~r~~~l~a~s~~e~~~Wi~al~~  108 (117)
T 1v5u_A           85 T-RRVYNFCAQDVPSAQQWVDRIQS  108 (117)
T ss_dssp             S-SCEEEEECSSHHHHHHHHHHHHT
T ss_pred             C-CceEEEECCCHHHHHHHHHHHHH
Confidence            4 46788888888888777665543

>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A

Probab=87.48  E-value=3.2  Score=34.34  Aligned_cols=88  Identities=13%  Similarity=0.112  Sum_probs=64.3

Q ss_pred             ccEEEeeeEEEeCCC-----CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEec-----cCCcEEEEEeCCC
Q 027012           93 KQVLFADKILKFTGS-----GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSE-----LSDNFFAIIIPSE  161 (229)
Q Consensus        93 e~VlFS~~V~Kinr~-----gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~-----~~D~~~VIhv~~e  161 (229)
                      ..++.+..+.|-...     ..-++|.++|++..||-..... .+.+..|+|..+..+....     ...+.|.|..++.
T Consensus       104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~  183 (211)
T 1u5e_A          104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK  183 (211)
T ss_dssp             SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSS
T ss_pred             CCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCCccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCC
Confidence            578999999988752     2457899999999998886543 4668889999998776432     2235777877765


Q ss_pred             CCeeeecCcHHHHHHHHHH
Q 027012          162 YDLLMASTRKTEIVTVLVE  180 (229)
Q Consensus       162 ~D~ll~s~~ktElvt~L~~  180 (229)
                      .-+.|.++...|+-.++..
T Consensus       184 r~~~l~A~s~~e~~~Wi~a  202 (211)
T 1u5e_A          184 RIYQFTAASPKDAEEWVQQ  202 (211)
T ss_dssp             CEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEEcCCHHHHHHHHHH
Confidence            7788988877776655543

>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=87.25  E-value=5.5  Score=28.41  Aligned_cols=89  Identities=11%  Similarity=-0.010  Sum_probs=56.9

Q ss_pred             CccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCcceeEEEeeccccce-EEEecc--CCcEEEEEeCCCCCeeeec
Q 027012           92 DKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEK-MCLSEL--SDNFFAIIIPSEYDLLMAS  168 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~g-VSvS~~--~D~~~VIhv~~e~D~ll~s  168 (229)
                      .+.+.++....|. ....-++|.++|++..||-.....-..+-.++|..... |...+.  ....|.|..++..-+.|.+
T Consensus         5 ~~~~~~~G~L~K~-~~k~Wk~RwfvL~~~~L~yyk~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~F~i~~~~~r~~~l~A   83 (107)
T 2cof_A            5 SSGLETSSYLNVL-VNSQWKSRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGCEVVPDPSPDHLYSFRILHKGEELAKLEA   83 (107)
T ss_dssp             CCCCTTCCEEEEE-ETTEEEEEEEEECSSCEEEECSSTTCSEEEEEECTTTCEEECCCBTTBSCEEEEEETTEEEEEEEC
T ss_pred             CCCCcEeEEEEEe-cCCCcceEEEEEECCEEEEEeCCcccCCCeeEEeccceEEEECCCCCCCeEEEEEeCCCeEEEEEc
Confidence            3556677777777 33445799999999998777654334444555554443 444332  2346677776555688888


Q ss_pred             CcHHHHHHHHHHH
Q 027012          169 TRKTEIVTVLVEA  181 (229)
Q Consensus       169 ~~ktElvt~L~~~  181 (229)
                      +...|+-..+...
T Consensus        84 ~s~~e~~~Wi~al   96 (107)
T 2cof_A           84 KSSEEMGHWLGLL   96 (107)
T ss_dssp             SSHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHH
Confidence            8888877666544

>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}

Probab=86.75  E-value=7  Score=28.73  Aligned_cols=89  Identities=18%  Similarity=0.155  Sum_probs=58.6

Q ss_pred             CccEEEeeeEEEeC--C-CCceeeeEEEEecCeEEEecC----CcceeEEEeeccccce--EEEec----cCCcEEEEEe
Q 027012           92 DKQVLFADKILKFT--G-SGKMKRRILLITDFAIYLVDP----ETDALKRRIALAAVEK--MCLSE----LSDNFFAIII  158 (229)
Q Consensus        92 ~e~VlFS~~V~Kin--r-~gK~~~R~LiITd~aiY~ld~----~~~klKrrIpL~~I~g--VSvS~----~~D~~~VIhv  158 (229)
                      +..|.++....|-.  . ...=++|.++|++..||-...    ..-..+-.|+|..+..  |...+    ...+.|.|..
T Consensus         2 ~~~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~   81 (134)
T 2y7b_A            2 NSSVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANREFCARRNTFELIT   81 (134)
T ss_dssp             CCCCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEE
T ss_pred             CCCceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccchhhccCCCEEEEEe
Confidence            46788888988872  2 234589999999999988863    2245677799998653  65543    2334556655


Q ss_pred             --CCCC-----------------CeeeecCcHHHHHHHHHH
Q 027012          159 --PSEY-----------------DLLMASTRKTEIVTVLVE  180 (229)
Q Consensus       159 --~~e~-----------------D~ll~s~~ktElvt~L~~  180 (229)
                        |...                 -++|+++...|+-..+..
T Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~a  122 (134)
T 2y7b_A           82 VRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQK  122 (134)
T ss_dssp             EEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHH
T ss_pred             cCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHH
Confidence              4321                 378888877776655443

>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=86.46  E-value=5.8  Score=29.99  Aligned_cols=87  Identities=14%  Similarity=0.180  Sum_probs=59.4

Q ss_pred             CccEEEeeeEEEeCCCC-------ceeeeEEEEecC-----eEEEecCC--cceeEEEeeccccceEEEec-cCCcEEEE
Q 027012           92 DKQVLFADKILKFTGSG-------KMKRRILLITDF-----AIYLVDPE--TDALKRRIALAAVEKMCLSE-LSDNFFAI  156 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~g-------K~~~R~LiITd~-----aiY~ld~~--~~klKrrIpL~~I~gVSvS~-~~D~~~VI  156 (229)
                      .+.++.+..+.|-...+       .-++|.++|++.     .|+-....  ....+..|+|..+..+...+ .....|.|
T Consensus        15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~~~~~~~~~~~~~~F~i   94 (150)
T 1wg7_A           15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNNKVRRFAFEL   94 (150)
T ss_dssp             SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECCCCSSCTTEEEE
T ss_pred             CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccCEEEecCCCCCceEEEE
Confidence            36678888888876432       347899999985     66555433  34577889999987665443 33456777


Q ss_pred             EeCCCCCeeeecCcHHHHHHHH
Q 027012          157 IIPSEYDLLMASTRKTEIVTVL  178 (229)
Q Consensus       157 hv~~e~D~ll~s~~ktElvt~L  178 (229)
                      ..++...++|.++...|+-.++
T Consensus        95 ~~~~~r~~~l~A~s~~e~~~Wi  116 (150)
T 1wg7_A           95 KMQDKSSYLLAADSEVEMEEWI  116 (150)
T ss_dssp             ECSSSCEEEEECSSHHHHHHHH
T ss_pred             EeCCCcEEEEEeCCHHHHHHHH
Confidence            7775568889887766654443

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}

Probab=84.71  E-value=11  Score=31.10  Aligned_cols=91  Identities=12%  Similarity=0.235  Sum_probs=66.1

Q ss_pred             CccEEEeeeEEEeCCC------CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccCCcEEEEEeCCCCCe
Q 027012           92 DKQVLFADKILKFTGS------GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDL  164 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~------gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~  164 (229)
                      .+.++.+....|-...      ..-+.|.++|++..|+-..... .+.+..|+|..+..+.-.......|.|..+ +.-+
T Consensus        55 ~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~~~~~g~I~L~~~~~v~~~~~k~~~F~I~t~-~r~~  133 (228)
T 3tfm_A           55 KQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSEEKLKGTVEVRSAKEIIDNTNKENGIDIIMA-DRTF  133 (228)
T ss_dssp             CCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTCCSEEEEEEGGGCSEEEEETTTTSEEEEECS-SCEE
T ss_pred             CCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCCcceeEEEEcCCCEEeccCCCCCcEEEEEcC-CcEE
Confidence            3567788888887652      3447999999999998876543 467888999999887766666677777654 4678


Q ss_pred             eeecCcHHHHH---HHHHHHHh
Q 027012          165 LMASTRKTEIV---TVLVEATK  183 (229)
Q Consensus       165 ll~s~~ktElv---t~L~~~~~  183 (229)
                      .|+++...|+-   ..|..+..
T Consensus       134 ~l~A~s~~e~~~Wv~aL~~~i~  155 (228)
T 3tfm_A          134 HLIAESPEDASQWFSVLSQVHS  155 (228)
T ss_dssp             EEECSSHHHHHHHHHHHHHHHT
T ss_pred             EEEcCCHHHHHHHHHHHHHHHh
Confidence            88888777764   44555443

>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=81.74  E-value=1.2  Score=35.25  Aligned_cols=56  Identities=14%  Similarity=0.232  Sum_probs=44.9

Q ss_pred             cCCcceeEEEeeccccceEEEecc-----CCcEEEEEeCCCCCeeeecCcHHHHHHHHHHH
Q 027012          126 DPETDALKRRIALAAVEKMCLSEL-----SDNFFAIIIPSEYDLLMASTRKTEIVTVLVEA  181 (229)
Q Consensus       126 d~~~~klKrrIpL~~I~gVSvS~~-----~D~~~VIhv~~e~D~ll~s~~ktElvt~L~~~  181 (229)
                      .|+.-+.|..|+++.|..|..++-     .+|.|||++...-+|+|+...-.++-++|...
T Consensus        65 PPkssKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~I  125 (136)
T 1v5m_A           65 PPKASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADI  125 (136)
T ss_dssp             STTSSSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHH
T ss_pred             CCcccCCccccchhhhhhhhhccccccCCccceEEEEecCCcEEEEEcCCHHHHHHHHHHH
Confidence            355678899999999999987643     47899999987779999998877877777554

>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*

Probab=80.68  E-value=13  Score=31.83  Aligned_cols=86  Identities=15%  Similarity=0.137  Sum_probs=60.6

Q ss_pred             CccEEEeeeEEEeCCCCceeeeEEEEecC-------eEEEecCCc------ceeEEEeeccccceEEEec--cCCcEEEE
Q 027012           92 DKQVLFADKILKFTGSGKMKRRILLITDF-------AIYLVDPET------DALKRRIALAAVEKMCLSE--LSDNFFAI  156 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~gK~~~R~LiITd~-------aiY~ld~~~------~klKrrIpL~~I~gVSvS~--~~D~~~VI  156 (229)
                      .+.|+.+..+.|-   ..-++|.++|.+.       .|+-.+..+      -+.+..|+|..+..|....  ...+.|.|
T Consensus         7 ~~~v~k~G~L~K~---K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~~~~~~~F~I   83 (264)
T 1qqg_A            7 FSDVRKVGYLRKP---KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRADSKNKHLVAL   83 (264)
T ss_dssp             --CEEEEEEEECT---TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECCSSCSSEEEE
T ss_pred             CCCccEEEEEEEC---CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccCCCCCcEEEE
Confidence            4678899999886   3457899999988       777776543      2578889999998776543  23457778


Q ss_pred             EeCCCCCeeeecCcHHHHHHHHHHH
Q 027012          157 IIPSEYDLLMASTRKTEIVTVLVEA  181 (229)
Q Consensus       157 hv~~e~D~ll~s~~ktElvt~L~~~  181 (229)
                      ..+ +.-+.|.++...|+-.++...
T Consensus        84 ~t~-~rty~l~A~se~e~~~Wi~aL  107 (264)
T 1qqg_A           84 YTR-DEHFAIAADSEAEQDSWYQAL  107 (264)
T ss_dssp             EES-SCEEEEECSSHHHHHHHHHHH
T ss_pred             EEC-CEEEEEEeCCHHHHHHHHHHH
Confidence            776 568888888777766555443

>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*

Probab=80.67  E-value=19  Score=28.38  Aligned_cols=86  Identities=14%  Similarity=0.125  Sum_probs=55.6

Q ss_pred             EEEeeeEEEeCCCC------ceeeeEEEEecCeEEEecC-----CcceeEEEeeccccceEEEecc-CC-----------
Q 027012           95 VLFADKILKFTGSG------KMKRRILLITDFAIYLVDP-----ETDALKRRIALAAVEKMCLSEL-SD-----------  151 (229)
Q Consensus        95 VlFS~~V~Kinr~g------K~~~R~LiITd~aiY~ld~-----~~~klKrrIpL~~I~gVSvS~~-~D-----------  151 (229)
                      |+.+....|=...+      .-++|.+||++..|+-.+.     ...+.+..|||..+..|..... .+           
T Consensus         3 vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~   82 (169)
T 1btk_A            3 VILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRG   82 (169)
T ss_dssp             CCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC----
T ss_pred             eEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhccccccc
Confidence            56677777754221      2589999999999987773     3467888999999877654311 11           


Q ss_pred             ----------------cEEEEEeCCCCCeeeecCcHHHHHHHHHHH
Q 027012          152 ----------------NFFAIIIPSEYDLLMASTRKTEIVTVLVEA  181 (229)
Q Consensus       152 ----------------~~~VIhv~~e~D~ll~s~~ktElvt~L~~~  181 (229)
                                      ..|-|..+ +..+.|+++.-.|.-.+|...
T Consensus        83 ~~~~~~~~~~i~~~~~~~F~I~t~-~rt~yl~A~s~~E~~eWi~aI  127 (169)
T 1btk_A           83 EESSEMEQISIIERFPYPFQVVYD-EGPLYVFSPTEELRKRWIHQL  127 (169)
T ss_dssp             -----CCTTHHHHCCCEEEEEEET-TCCEEEEESCHHHHHHHHHHH
T ss_pred             CcccccccccccccccccEEEEeC-CceEEEEcCCHHHHHHHHHHH
Confidence                            33444444 367888777666655554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	229
d1omwa2	119	G-protein coupled receptor kinase 2 (beta-adrenerg	94.57
d1wgqa_	109	FYVE, RhoGEF and PH domain containing protein 6, F	94.32
d1u5fa1	111	Src-associated adaptor protein Skap2 {Mouse (Mus m	94.12
d2coda1	102	Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96	93.97
d1v61a_	132	Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [	93.54
d1maia_	119	Phospholipase C delta-1 {Rat (Rattus norvegicus) [	93.25
d1plsa_	113	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	92.78
d2dfka2	162	Rho guanine nucleotide exchange factor 9, Collybis	91.47
d1mixa2	92	Talin {Chicken (Gallus gallus) [TaxId: 9031]}	91.3
d1v89a_	118	Rho-GTPase-activating protein 25 (KIAA0053) {Human	89.21
d2cy5a1	129	EPS8-like protein 1, EPS8L1 {Mouse (Mus musculus)	89.2
d1wj1a_	156	Numb {Mouse (Mus musculus) [TaxId: 10090]}	88.96
d1upqa_	107	Phosphoinositol 3-phosphate binding protein-1, PEP	88.64
d1v5ua_	117	SET binding factor 1, Sbf1 {Mouse (Mus musculus) [	88.64
d1fhoa_	119	UNC-89 {Nematode (Caenorhabditis elegans) [TaxId:	88.11
d1p3ra_	148	Disabled homolog 2 (Dab2) {Mouse (Mus musculus) [T	87.29
d1u5da1	106	Src kinase-associated phosphoprotein SKAP55 (SCAP1	85.58
d1u5ea1	209	Src-associated adaptor protein Skap2 {Mouse (Mus m	84.48
d1ntva_	152	Disabled homolog 1 (Dab1) {Mouse (Mus musculus) [T	82.67
d1ddma_	135	Numb {Fruit fly (Drosophila melanogaster) [TaxId:	82.66
d1w1ha_	147	3-phosphoinositide dependent protein kinase-1 {Hum	80.57
d1zc3b1	109	Exocyst complex protein EXO84 {Rat (Rattus norvegi	80.17
d1eaza_	103	Tapp1 {Human (Homo sapiens) [TaxId: 9606]}	80.08

>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.57  E-value=0.3  Score=34.30  Aligned_cols=86  Identities=9%  Similarity=0.137  Sum_probs=59.2

Q ss_pred             ccEEEeeeEEEeCCCCc--eeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcE-EEEEeCCCCCeeeecC
Q 027012           93 KQVLFADKILKFTGSGK--MKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNF-FAIIIPSEYDLLMAST  169 (229)
Q Consensus        93 e~VlFS~~V~Kinr~gK--~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~-~VIhv~~e~D~ll~s~  169 (229)
                      ..|++.....|-...++  -+.|.++|++..||-.... ...+..|++..+..|..+...... |.|.++++.-+.|+++
T Consensus         8 ~~~i~eG~L~K~g~~~~~~WkkR~fvL~~~~L~yy~~~-~~~~~~i~l~~~~~v~~~~~~~~~~f~i~~~~~~~~~f~a~   86 (119)
T d1omwa2           8 KDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEG-EAPQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFVLQCD   86 (119)
T ss_dssp             SCCCEEEEEEECC------CEEEEEEEETTEEEEECTT-SCCCEEEEGGGEEEEEEEESSSCEEEEEEETTSCEEEEECS
T ss_pred             CCeEEEEEEEEECCCCCCCeEEEEEEEEcCeEEEEecc-cccCccceeccccccccccccccceEEEEcCCCcEEEEECC
Confidence            56889999999876443  3899999999999887653 334567999999888876655542 3333355557889988


Q ss_pred             cHHHHHHHHH
Q 027012          170 RKTEIVTVLV  179 (229)
Q Consensus       170 ~ktElvt~L~  179 (229)
                      ...|+-.++.
T Consensus        87 s~~e~~~W~~   96 (119)
T d1omwa2          87 SDPELVQWKK   96 (119)
T ss_dssp             SHHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            8777655443

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.32  E-value=0.31  Score=33.33  Aligned_cols=93  Identities=12%  Similarity=0.123  Sum_probs=65.0

Q ss_pred             CCccEEEeeeEEEeCCCCc-eeeeEEEEecCeEEEecC-CcceeEEEeeccccceEEEeccC--CcEEEEEeCCCCCeee
Q 027012           91 GDKQVLFADKILKFTGSGK-MKRRILLITDFAIYLVDP-ETDALKRRIALAAVEKMCLSELS--DNFFAIIIPSEYDLLM  166 (229)
Q Consensus        91 ~~e~VlFS~~V~Kinr~gK-~~~R~LiITd~aiY~ld~-~~~klKrrIpL~~I~gVSvS~~~--D~~~VIhv~~e~D~ll  166 (229)
                      +.+.+..+..+.|.....+ =+.|.++|++..||.... ...+.+..|+|....-+...+..  .+.|.|.+++..-++|
T Consensus         4 ~~~~~~~~G~L~k~~~~~~~W~kr~~vL~~~~L~~~k~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~~~~~~~~f   83 (109)
T d1wgqa_           4 GSSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVF   83 (109)
T ss_dssp             CCCSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTCSSCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEE
T ss_pred             CCCCCcEEEEEEEECCCCCCceEEEEEEeCCEEEEeccccccccccccccceeeeeecccccccceeeeeecccceEEEE
Confidence            3466777888888876554 499999999999988854 34567778998887655554443  3466666665445788


Q ss_pred             ecCcHHHHHHHHHHHHh
Q 027012          167 ASTRKTEIVTVLVEATK  183 (229)
Q Consensus       167 ~s~~ktElvt~L~~~~~  183 (229)
                      +|+...|+-.+|.....
T Consensus        84 ~a~s~~~~~~Wi~ai~~  100 (109)
T d1wgqa_          84 KADDAHSTQRWIDAFQE  100 (109)
T ss_dssp             ECSSHHHHHHHHHHHHH
T ss_pred             ECCCHHHHHHHHHHHHH
Confidence            88888777766655544

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.12  E-value=0.52  Score=32.17  Aligned_cols=89  Identities=13%  Similarity=0.133  Sum_probs=65.8

Q ss_pred             CccEEEeeeEEEeCCCC-----ceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEecc-----CCcEEEEEeCC
Q 027012           92 DKQVLFADKILKFTGSG-----KMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSEL-----SDNFFAIIIPS  160 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~g-----K~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~-----~D~~~VIhv~~  160 (229)
                      ...|+-+....|..+..     +=++|.++|++..||..+... ...+..|+|..+..+.....     .+..|.|..++
T Consensus         6 ~~~v~k~G~L~k~~~~~~~~~~~W~~r~~vL~~~~L~~y~~~~~~~p~g~i~L~~~~~~~~~~~~~~~~~~~~f~i~~~~   85 (111)
T d1u5fa1           6 LPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPD   85 (111)
T ss_dssp             CSSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTT
T ss_pred             CCCeeEEEEEEEECCCCCCCcCCceEEEEEEECCEEEeeccccccCcceEEEecccEEEeeccccccccccceEEEEccC
Confidence            36788889998887643     238999999999999886543 45577899999876655322     33677777776


Q ss_pred             CCCeeeecCcHHHHHHHHHH
Q 027012          161 EYDLLMASTRKTEIVTVLVE  180 (229)
Q Consensus       161 e~D~ll~s~~ktElvt~L~~  180 (229)
                      ...++|+++.-.|.-..+..
T Consensus        86 ~~~~~~~a~s~~e~~~W~~a  105 (111)
T d1u5fa1          86 KRIYQFTAASPKDAEEWVQQ  105 (111)
T ss_dssp             SCEEEEECSSHHHHHHHHHH
T ss_pred             CcEEEEEcCCHHHHHHHHHH
Confidence            67899999888887766654

>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Centaurin-delta 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.97  E-value=0.51  Score=32.04  Aligned_cols=80  Identities=18%  Similarity=0.216  Sum_probs=56.8

Q ss_pred             eeEEEeCCCCce--eeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeecCcHHHHH
Q 027012           99 DKILKFTGSGKM--KRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEIV  175 (229)
Q Consensus        99 ~~V~Kinr~gK~--~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~~ktElv  175 (229)
                      ....|-...+..  ++|.++|++..|+..... .......|||.++..+..  ..++.|.|+.++ ..+.|+++...|+-
T Consensus         5 G~L~K~~~~~~~~W~kr~fvL~~~~L~~~~~~~~~~~~~~i~L~~~~~~~~--~~~~~f~i~~~~-~~~~l~a~s~~e~~   81 (102)
T d2coda1           5 GWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRV--QGDNKFEVVTTQ-RTFVFRVEKEEERN   81 (102)
T ss_dssp             EEEEECCSSSSSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTEEEEEE--ETTTEEEEEESS-CCEEEECSSHHHHH
T ss_pred             EEEEEECCCCCCCceEEEEEEECCEEEEEeccCcceeEEEEEchhceeecc--ccceeEEEEcCC-cEEEEEeCCHHHHH
Confidence            445566654432  799999999999887643 355677899998876654  356788888875 57889988877766


Q ss_pred             HHHHHH
Q 027012          176 TVLVEA  181 (229)
Q Consensus       176 t~L~~~  181 (229)
                      ..+...
T Consensus        82 ~Wi~ai   87 (102)
T d2coda1          82 DWISIL   87 (102)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555443

>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac/CDC42 GEF 6, alpha-pix
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.54  E-value=0.12  Score=37.75  Aligned_cols=90  Identities=13%  Similarity=0.228  Sum_probs=61.6

Q ss_pred             ccEEEeeeEEEeCCCC-ceeeeEEEEecCeEEEecCC----cceeEEEeeccccceEEEeccCC---cEEEEEeCCCCCe
Q 027012           93 KQVLFADKILKFTGSG-KMKRRILLITDFAIYLVDPE----TDALKRRIALAAVEKMCLSELSD---NFFAIIIPSEYDL  164 (229)
Q Consensus        93 e~VlFS~~V~Kinr~g-K~~~R~LiITd~aiY~ld~~----~~klKrrIpL~~I~gVSvS~~~D---~~~VIhv~~e~D~  164 (229)
                      ..+++...|.+-+..+ +.++|.|+|-+..|+...++    .|+.+..|||..+. |......+   ..|.|.-+...-+
T Consensus        26 G~li~~g~~~~~~~~~~~~k~R~~fLF~~~Ll~~k~~~~~~~~~~k~~i~l~~~~-v~~~~~~~~~~~~f~i~~~~~~~~  104 (132)
T d1v61a_          26 GNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMV-VNRLDEIEGSDCMFEITGSTVERI  104 (132)
T ss_dssp             CCCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTCB-CSTTCSSSSSCCCEEEECSSSCEE
T ss_pred             cCEEEEEEEEEEEecCCCcceEEEEEeCCEEEEEEEcCCCceeEEeeecchhhcc-ccccccccCccceEEEeCCCCCEE
Confidence            5688888888777644 78999999999999888753    38889999999984 33222222   2355555544568


Q ss_pred             eeecCcHHHH---HHHHHHHHh
Q 027012          165 LMASTRKTEI---VTVLVEATK  183 (229)
Q Consensus       165 ll~s~~ktEl---vt~L~~~~~  183 (229)
                      +|.|..-.|-   +..|.++.+
T Consensus       105 ~l~a~s~eek~~Wv~~L~~~i~  126 (132)
T d1v61a_         105 VVHCNNNQDFQEWMEQLNRLTK  126 (132)
T ss_dssp             EECCCCSHHHHHHHHHHHHHHT
T ss_pred             EEEcCCHHHHHHHHHHHHHHHh
Confidence            8888655554   444554443

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C delta-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.25  E-value=0.45  Score=33.61  Aligned_cols=81  Identities=10%  Similarity=0.181  Sum_probs=52.3

Q ss_pred             eeEEEeCCCCceeeeEEEEecCe--EEEecCC--cceeEEEeeccccceEEEeccC------------Cc-EEEEEeCCC
Q 027012           99 DKILKFTGSGKMKRRILLITDFA--IYLVDPE--TDALKRRIALAAVEKMCLSELS------------DN-FFAIIIPSE  161 (229)
Q Consensus        99 ~~V~Kinr~gK~~~R~LiITd~a--iY~ld~~--~~klKrrIpL~~I~gVSvS~~~------------D~-~~VIhv~~e  161 (229)
                      +...|+.++++...|++.|+...  ||--+++  .-+.+..|||++|..|..-..+            +. |-+|+-..+
T Consensus        15 ~~l~K~~~~~~~k~R~f~L~~d~~~i~~~~~~~~~~~~~~~i~i~~I~~V~~G~~s~~~~~~~~~~~~~~~FsIv~~~~~   94 (119)
T d1maia_          15 SQLLKVKSSSWRRERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQR   94 (119)
T ss_dssp             EEEEEESSSSCEEEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSSC
T ss_pred             CeEEEeCCCCCCEEEEEEEcCCCCEEEEeCCCCCCCccceEEEHHHceEEEcCCCCchhhhcccCCCcCceEEEEEcCCC
Confidence            56889999999999999998653  3322222  1234678999999999773221            22 434443443


Q ss_pred             CCeeeecCcHHHHHHHHH
Q 027012          162 YDLLMASTRKTEIVTVLV  179 (229)
Q Consensus       162 ~D~ll~s~~ktElvt~L~  179 (229)
                      .-+-|.|+...|+-.++.
T Consensus        95 r~l~l~a~s~~~~~~Wv~  112 (119)
T d1maia_          95 NTLDLIAPSPADAQHWVQ  112 (119)
T ss_dssp             CCEEEECSSHHHHHHHHH
T ss_pred             cEEEEEECCHHHHHHHHH
Confidence            456677888777665554

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.78  E-value=0.65  Score=31.74  Aligned_cols=88  Identities=11%  Similarity=0.021  Sum_probs=60.3

Q ss_pred             ccEEEeeeEEEeCCCC-ceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEe---ccCCcEEEEEeCCCCCeeee
Q 027012           93 KQVLFADKILKFTGSG-KMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLS---ELSDNFFAIIIPSEYDLLMA  167 (229)
Q Consensus        93 e~VlFS~~V~Kinr~g-K~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS---~~~D~~~VIhv~~e~D~ll~  167 (229)
                      .+++-+..+.|-.... .=++|.++|++..||..... ....+..|+|..+..+..+   ...+..|.|..++...+.|.
T Consensus         3 ~~~ikeG~L~k~~~~~k~WkkryfvL~~~~L~~y~~~~~~~p~~~i~l~~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~   82 (113)
T d1plsa_           3 PKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQ   82 (113)
T ss_dssp             CCCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEE
T ss_pred             CCceEEEEEEEeCCCCCCceEEEEEEECCEEEEEecCCccccceEEECccCeEEeeecccCCcceEEEEecCCCeEEEEE
Confidence            3456667777765432 44789999999999888543 3566778999998777664   33344566665555578888


Q ss_pred             cCcHHHHHHHHHH
Q 027012          168 STRKTEIVTVLVE  180 (229)
Q Consensus       168 s~~ktElvt~L~~  180 (229)
                      ++...|+..++..
T Consensus        83 a~s~~e~~~Wi~a   95 (113)
T d1plsa_          83 AAFLEERDAWVRD   95 (113)
T ss_dssp             CSSHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            8887776655443

>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 9, Collybistin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.47  E-value=1.9  Score=31.80  Aligned_cols=89  Identities=15%  Similarity=0.218  Sum_probs=59.1

Q ss_pred             CccEEEeeeEEEeCC-CCceeeeEEEEecCeEEEecCC-----cceeEEEeeccccceEEEeccCC---------cEEEE
Q 027012           92 DKQVLFADKILKFTG-SGKMKRRILLITDFAIYLVDPE-----TDALKRRIALAAVEKMCLSELSD---------NFFAI  156 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr-~gK~~~R~LiITd~aiY~ld~~-----~~klKrrIpL~~I~gVSvS~~~D---------~~~VI  156 (229)
                      ...++....+.++.. .+|.+.|.++|-+..|+...+.     .|..+..++|..+.-..+ ...+         +.|.|
T Consensus        24 ~r~Li~eG~L~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~y~~k~~i~L~~~~v~~~-~~~~~~~~~~~~~~~f~i  102 (162)
T d2dfka2          24 SSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDI-EDGRDDDFNVSMKNAFKL  102 (162)
T ss_dssp             CCCEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEEC-CSEECSSSCCEESSEEEE
T ss_pred             CceEEEEEEEEEEEcCCCCceeEEEEEeCCeEEEEEecCCCCCceEEccccchhhceeeec-ccccccccCccccceEEE
Confidence            367899999999976 6789999999999988877532     488899999987743322 1111         23566


Q ss_pred             EeCCCC-CeeeecCcH---HHHHHHHHHH
Q 027012          157 IIPSEY-DLLMASTRK---TEIVTVLVEA  181 (229)
Q Consensus       157 hv~~e~-D~ll~s~~k---tElvt~L~~~  181 (229)
                      +.++.. -++|.+...   .+=+..|.++
T Consensus       103 ~~~~~~~~~~~~A~s~~eK~~W~~~l~~~  131 (162)
T d2dfka2         103 HNKETEEVHLFFAKKLEEKIRWLRAFREE  131 (162)
T ss_dssp             EESSSSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred             EECCCCeEEEEEeCCHHHHHHHHHHHHHH
Confidence            665543 367776554   4444445443

>d1mixa2 b.55.1.5 (A:309-400) Talin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Third domain of FERM
domain: Talin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=91.30  E-value=1.3  Score=30.35  Aligned_cols=74  Identities=20%  Similarity=0.294  Sum_probs=56.4

Q ss_pred             EeCCCCceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeC--CCCCeeeecCcHHHHHHHHH
Q 027012          103 KFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIP--SEYDLLMASTRKTEIVTVLV  179 (229)
Q Consensus       103 Kinr~gK~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~--~e~D~ll~s~~ktElvt~L~  179 (229)
                      +...+.+..+++|-||...|.++|+.+..+...-|+..|....  . .++.|-|.+-  .++-++|.++.-.||...|.
T Consensus        10 ~~~~~~~~~~~lLav~~~gv~lld~~t~~~l~~~py~~Ir~~g--~-~~~~F~~~~G~~~~g~~~f~T~q~~eI~~li~   85 (92)
T d1mixa2          10 KMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWA--A-SPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIA   85 (92)
T ss_dssp             CCSSCSSCEEEEEEECSSEEEEEETTTCCEEEEEEGGGCCEEE--E-CSSEEEEECGGGSSSCEEEECSCHHHHHHHHH
T ss_pred             EecCCCCCCCEEEEECcceEEEEcCCCCceEEEcchhheeecc--C-CCCEEEEEECCCcceEEEEEeCCHHHHHHHHH
Confidence            3344678899999999999999999999888999999998765  2 3555667762  24568888888777665544

>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho-GTPase-activating protein 25 (KIAA0053)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.21  E-value=2.2  Score=28.89  Aligned_cols=92  Identities=13%  Similarity=0.097  Sum_probs=62.5

Q ss_pred             CCccEEEeeeEEEeCCCCce-eeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccC----CcEEEEEeCCC---
Q 027012           91 GDKQVLFADKILKFTGSGKM-KRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELS----DNFFAIIIPSE---  161 (229)
Q Consensus        91 ~~e~VlFS~~V~Kinr~gK~-~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~----D~~~VIhv~~e---  161 (229)
                      |.+.++-+..+.|.....+. ++|.++|++..||..+..+ ...+..++|..+.-+.+....    ...|-|+.+..   
T Consensus         4 g~s~~~k~G~L~K~~~~~k~WkkR~fvL~~~~l~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~f~l~~~~~~~~   83 (118)
T d1v89a_           4 GSSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQN   83 (118)
T ss_dssp             SSSCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSC
T ss_pred             CCCCCeEEEEEEEECCCCCCcEEEEEEEECCEEEEecccCcccccceeccCceEEEEeccccccCCCcEEEEecCCCcce
Confidence            55778889999998776654 8999999999998876433 456667888887655553222    23445555442   


Q ss_pred             ----CCeeeecCcHHHHHHHHHHHH
Q 027012          162 ----YDLLMASTRKTEIVTVLVEAT  182 (229)
Q Consensus       162 ----~D~ll~s~~ktElvt~L~~~~  182 (229)
                          .-++|+++...|.-.++...-
T Consensus        84 ~~~~~~~~~~a~s~ee~~~Wi~aI~  108 (118)
T d1v89a_          84 RMGQDSYVLMASSQAEMEEWVKFLR  108 (118)
T ss_dssp             CSSCCCEEEECSSHHHHHHHHHHHH
T ss_pred             ecCCcEEEEEcCCHHHHHHHHHHHH
Confidence                237888888887766555443

>d2cy5a1 b.55.1.2 (A:31-159) EPS8-like protein 1, EPS8L1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: EPS8-like protein 1, EPS8L1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.20  E-value=1.8  Score=30.97  Aligned_cols=75  Identities=12%  Similarity=0.082  Sum_probs=53.3

Q ss_pred             ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEE---eccCCcEEEEEeCCC-----CCeeeecCc-H-HHHHHHH
Q 027012          109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCL---SELSDNFFAIIIPSE-----YDLLMASTR-K-TEIVTVL  178 (229)
Q Consensus       109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSv---S~~~D~~~VIhv~~e-----~D~ll~s~~-k-tElvt~L  178 (229)
                      +.++=.|-||+..|.++|+.+..+-...||..|+-.+.   .+.-+.+|++-+...     .-.+|.|+. . .+|...|
T Consensus        42 ~~q~v~L~Vs~~gi~l~D~~t~~~l~~~~i~~Is~c~~~~~~~~~~~~fafi~~~~~~~~~~CHvF~C~~~~A~~I~~~l  121 (129)
T d2cy5a1          42 WAQEMLLRVSPSQVTLLDPVSKEELESYPLDAIVRCDAVMPRGRSRSLLLLVCQEPERAQPDVHFFQGLLLGAELIREDI  121 (129)
T ss_dssp             CCEEEEEEECSSEEEEECTTTCCEEEEEEGGGEEEEEEECCSSCSSCEEEEEECCTTCSSCEEEEEEECTTHHHHHHHHH
T ss_pred             cCceEEEEEeCCeEEEEeCCCCceeeccccceEEEEeecCCCCcccceEEEEecCCCCCceEEEEEEeccccHHHHHHHH
Confidence            46677788999999999998888888899999988775   333344677766432     245777864 3 3455667


Q ss_pred             HHHHh
Q 027012          179 VEATK  183 (229)
Q Consensus       179 ~~~~~  183 (229)
                      ..+++
T Consensus       122 ~~A~~  126 (129)
T d2cy5a1         122 QGALQ  126 (129)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66664

>d1wj1a_ b.55.1.2 (A:) Numb {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: Numb
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.96  E-value=1.2  Score=33.04  Aligned_cols=76  Identities=14%  Similarity=0.086  Sum_probs=58.2

Q ss_pred             ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCC--C---CeeeecC--cHHHHHHHHHHH
Q 027012          109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSE--Y---DLLMAST--RKTEIVTVLVEA  181 (229)
Q Consensus       109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e--~---D~ll~s~--~ktElvt~L~~~  181 (229)
                      ++++-.|.||...|-++++.+-.+-...||..|+-.+..+...++|++.+.+.  .   -.+|.|+  .-.+|+..|..+
T Consensus        60 k~~~V~L~Vs~~gi~v~d~~~~~~l~~~~l~~ISfc~~d~~~~~~FafI~~~~~~~~~~CHVF~c~~~~A~~I~~ai~~A  139 (156)
T d1wj1a_          60 KAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCA  139 (156)
T ss_dssp             CCEEEEEEEETTEEEEEETTTTEEEECCBTTTCCEEECCSSSSSEEEEEEECSSSSSEEEEEEEESSSCHHHHHHHHHHH
T ss_pred             CCCeEEEEEecCccEEEcCCCCceeeEEeccEEEEEEecCCCCeEEEEEEecCCCCcEEEEEEEeCcHHHHHHHHHHHHH
Confidence            56777899999999999988777878899999998888776667888777432  1   2566664  345788888888


Q ss_pred             Hhc
Q 027012          182 TKG  184 (229)
Q Consensus       182 ~~~  184 (229)
                      ++.
T Consensus       140 F~~  142 (156)
T d1wj1a_         140 FAA  142 (156)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            763

>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositol 3-phosphate binding protein-1, PEPP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.64  E-value=2.2  Score=28.19  Aligned_cols=90  Identities=13%  Similarity=0.146  Sum_probs=60.5

Q ss_pred             CccEEEeeeEEEeCCCC--ceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEe---ccCCc-EEEEEeCCCCCe
Q 027012           92 DKQVLFADKILKFTGSG--KMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLS---ELSDN-FFAIIIPSEYDL  164 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~g--K~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS---~~~D~-~~VIhv~~e~D~  164 (229)
                      +..+..+....|-.+.+  .=++|.++|++..||...... -.-+..|+|..+.-+.+.   ..... .|.|..++...+
T Consensus         6 ~~~~~~~G~L~k~~~~~~k~W~kr~~vL~~~~L~~y~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~   85 (107)
T d1upqa_           6 NLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTY   85 (107)
T ss_dssp             TSCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCE
T ss_pred             CCceeEEEEEEEeCCCCCCCeeEEEEEEECCEEEEecCcccccccceecccceEEEEeccCcccCcceEEEEEcCCCeEE
Confidence            45678899998877654  359999999999998776543 344667888877554442   22222 333333545578


Q ss_pred             eeecCcHHHHHHHHHHH
Q 027012          165 LMASTRKTEIVTVLVEA  181 (229)
Q Consensus       165 ll~s~~ktElvt~L~~~  181 (229)
                      .|+++...|+-..+...
T Consensus        86 ~~~a~s~~e~~~Wi~al  102 (107)
T d1upqa_          86 VLAADTLEDLRGWLRAL  102 (107)
T ss_dssp             EEECSSHHHHHHHHHHH
T ss_pred             EEEcCCHHHHHHHHHHH
Confidence            89999988887766544

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SET binding factor 1, Sbf1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.64  E-value=2.1  Score=28.84  Aligned_cols=90  Identities=14%  Similarity=0.110  Sum_probs=61.6

Q ss_pred             CccEEEeeeEEEeCCCCc-eeeeEEEEec--CeEEEecCCc-ceeEEEeeccccceEEEeccC---------CcEEEEEe
Q 027012           92 DKQVLFADKILKFTGSGK-MKRRILLITD--FAIYLVDPET-DALKRRIALAAVEKMCLSELS---------DNFFAIII  158 (229)
Q Consensus        92 ~e~VlFS~~V~Kinr~gK-~~~R~LiITd--~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~---------D~~~VIhv  158 (229)
                      ...+.+...+.|-....+ =++|.++|..  ..||..+... -..+..|+|..+..+.+....         ..+|.++.
T Consensus         5 ~s~~~~eG~L~k~~~~~k~WkkR~fvL~~~~~~L~~~~~~~~~~p~g~i~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~   84 (117)
T d1v5ua_           5 SSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKT   84 (117)
T ss_dssp             CCSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEE
T ss_pred             CCCCeEEEEEEEECCCCCCceEEEEEEeCCCCEEEecccccccCcceEEEecceEEEeecccccccccccccceEEEeeC
Confidence            456778888888765444 4899999954  4576665433 455677999998888764322         23555655


Q ss_pred             CCCCCeeeecCcHHHHHHHHHHHH
Q 027012          159 PSEYDLLMASTRKTEIVTVLVEAT  182 (229)
Q Consensus       159 ~~e~D~ll~s~~ktElvt~L~~~~  182 (229)
                      + ...+.|+++...|...+|...-
T Consensus        85 ~-~~~~~~~a~s~~e~~~Wv~~l~  107 (117)
T d1v5ua_          85 T-RRVYNFCAQDVPSAQQWVDRIQ  107 (117)
T ss_dssp             S-SCEEEEECSSHHHHHHHHHHHH
T ss_pred             C-CcEEEEEeCCHHHHHHHHHHHH
Confidence            4 4678899988888877776653

>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: UNC-89
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=88.11  E-value=1.2  Score=32.25  Aligned_cols=67  Identities=10%  Similarity=0.145  Sum_probs=52.8

Q ss_pred             ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCC------cceeEEEeeccccceEEEeccCCcEEEEEeCC
Q 027012           93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPE------TDALKRRIALAAVEKMCLSELSDNFFAIIIPS  160 (229)
Q Consensus        93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~------~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~  160 (229)
                      +.+|.-+...-...++|.++|.++|=+..|....++      .|.+|..|+|+++ +|.=+...+.-|.|+...
T Consensus         8 G~ll~~~~f~v~~~~~k~k~R~vFLF~~~ll~~K~~~~~~~~~y~~K~~i~l~~~-~v~e~~gd~~~F~i~~~~   80 (119)
T d1fhoa_           8 GRIIRHDAFQVWEGDEPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKY-NIRQHTTDEDTIVLQPQE   80 (119)
T ss_dssp             CCSSEEEEEEECSTTCSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSC-EEEEECTTCCEEEEECCS
T ss_pred             CceEEEeEEEEEeCCCCceEEEEEEEcCeEEEEEeccCCCCceEEEecEEECCce-EEEEcCCCCcEEEEEeCC
Confidence            566667777777778899999999999888876543      4889999999998 666666777788898754

>d1p3ra_ b.55.1.2 (A:) Disabled homolog 2 (Dab2) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: Disabled homolog 2 (Dab2)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.29  E-value=3.1  Score=30.33  Aligned_cols=76  Identities=12%  Similarity=0.135  Sum_probs=56.9

Q ss_pred             ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCe---eeec-CcHHHHHHHHHHHHhc
Q 027012          109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDL---LMAS-TRKTEIVTVLVEATKG  184 (229)
Q Consensus       109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~---ll~s-~~ktElvt~L~~~~~~  184 (229)
                      ++++-.|.||...|.++|+.+-.+-...||..|+-.+..+....+|..-+.+++-.   +|.| ..-.+|+..|.++++.
T Consensus        58 ~~~~V~l~Vs~~gi~v~d~~t~~~i~~~~i~~ISf~~~d~~~~~~FafI~~~~~~~~Chvf~~~~~A~~i~~~i~~AF~~  137 (148)
T d1p3ra_          58 HKQRIWVNISLSGIKIIDEKTGVIEHEHPVNKISFIARDVTDNRAFGYVCGGEGQHQFFAIKTGQQAEPLVVDLKDLFQV  137 (148)
T ss_dssp             CCEEEEEEEETTEEEEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESSTTCEEEEEEEESSCSHHHHHHHHHHHHH
T ss_pred             CCceEEEEEEcCEEEEEcCCCcceEEEeehhhEEEEEECCCCCcEEEEEEeCCCcEEEEEEEchHHHHHHHHHHHHHHHH
Confidence            34455567999999999998777778899999999888777777777777655332   3334 3456888999988874

>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src kinase-associated phosphoprotein SKAP55 (SCAP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.58  E-value=3.5  Score=27.27  Aligned_cols=85  Identities=12%  Similarity=0.110  Sum_probs=55.1

Q ss_pred             EEEeeeEEEeCCCC-----ceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEecc-----CCcEEEEEeCCCCC
Q 027012           95 VLFADKILKFTGSG-----KMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSEL-----SDNFFAIIIPSEYD  163 (229)
Q Consensus        95 VlFS~~V~Kinr~g-----K~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~~-----~D~~~VIhv~~e~D  163 (229)
                      |+-+..+.|-.+.+     +=++|.++|++..+|-.... ....+..|+|..+........     ....|.|..++...
T Consensus         1 vik~G~L~k~~~~~~~~~~~Wkkr~~vL~~~~L~y~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~   80 (106)
T d1u5da1           1 VIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRT   80 (106)
T ss_dssp             EEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCC
T ss_pred             CeEEEEEEEECCCCCCCcCCcEEEEEEEECCEEEEEecccccccccccccCCceEeeccccccccCCceeEEEEcCCCcE
Confidence            34455666655532     12789999999999887543 345567789988765554432     23455565555568


Q ss_pred             eeeecCcHHHHHHHHH
Q 027012          164 LLMASTRKTEIVTVLV  179 (229)
Q Consensus       164 ~ll~s~~ktElvt~L~  179 (229)
                      ++|+++.-.|.-..+.
T Consensus        81 ~~f~a~s~~e~~~W~~   96 (106)
T d1u5da1          81 YEFTATSPAEARDWVD   96 (106)
T ss_dssp             EEEECSSHHHHHHHHH
T ss_pred             EEEEeCCHHHHHHHHH
Confidence            9999987777655543

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.48  E-value=3  Score=31.46  Aligned_cols=88  Identities=14%  Similarity=0.148  Sum_probs=62.3

Q ss_pred             ccEEEeeeEEEeCCCC-----ceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEeccC-----CcEEEEEeCCC
Q 027012           93 KQVLFADKILKFTGSG-----KMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSELS-----DNFFAIIIPSE  161 (229)
Q Consensus        93 e~VlFS~~V~Kinr~g-----K~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~~~-----D~~~VIhv~~e  161 (229)
                      ..++.+..+.|-...+     .=++|.++|++..||..... ....+..|+|..+..+.+....     .+.|.|..++.
T Consensus       102 ~~~~k~G~L~K~~~~~~~~~~~Wkkr~fvL~~~~L~yy~~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~~~~F~i~~~~~  181 (209)
T d1u5ea1         102 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK  181 (209)
T ss_dssp             SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSS
T ss_pred             CCeeEEEEEEEecCCCCCccccceEEEEEEECCEEEEEecCCCCccceEEEecceeeeeccccccccCCCcEEEEEcCCC
Confidence            5678888888865432     23789999999999988643 3456778999988766665433     24566666766


Q ss_pred             CCeeeecCcHHHHHHHHHH
Q 027012          162 YDLLMASTRKTEIVTVLVE  180 (229)
Q Consensus       162 ~D~ll~s~~ktElvt~L~~  180 (229)
                      ..+.|+++.-.|+-.++..
T Consensus       182 r~~~f~a~s~~e~~~Wi~a  200 (209)
T d1u5ea1         182 RIYQFTAASPKDAEEWVQQ  200 (209)
T ss_dssp             CEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEEcCCHHHHHHHHHH
Confidence            7889999877777666543

>d1ntva_ b.55.1.2 (A:) Disabled homolog 1 (Dab1) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: Disabled homolog 1 (Dab1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.67  E-value=6.3  Score=28.54  Aligned_cols=75  Identities=15%  Similarity=0.155  Sum_probs=55.2

Q ss_pred             ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCe---eeec-CcHHHHHHHHHHHHh
Q 027012          109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDL---LMAS-TRKTEIVTVLVEATK  183 (229)
Q Consensus       109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~---ll~s-~~ktElvt~L~~~~~  183 (229)
                      ++.+-.|.||+..|.++++.+-.+-...|+..|+-.+.-+....+|.+...+++-.   +|.| +.-.+|+..|.+++.
T Consensus        59 ~~~~V~L~VS~~gi~v~d~~~~~~i~~~~i~~ISf~~~d~~~~~~Fa~i~~~~~~~~Chvf~~~~~A~~I~~~l~~AF~  137 (152)
T d1ntva_          59 HKQKIFLTISFGGIKIFDEKTGALQHHHAVHEISYIAKDITDHRAFGYVCGKEGNHRFVAIKTAQAAEPVILDLRDLFQ  137 (152)
T ss_dssp             CCEEEEEEEETTEEEEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESSTTCCEEEEEEESSCSHHHHHHHHHHHH
T ss_pred             CCcEEEEEEecCcEEEEccccCcEEEEEEhhhEEEEEecCCcCeeeeeeecCCCceEEEEEeehhhHHHHHHHHHHHHH
Confidence            34555688999999999988877778899999988888766666777877665433   3334 334578888887776

>d1ddma_ b.55.1.2 (A:) Numb {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Phosphotyrosine-binding domain (PTB)
domain: Numb
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=82.66  E-value=0.48  Score=34.47  Aligned_cols=76  Identities=14%  Similarity=0.075  Sum_probs=57.5

Q ss_pred             ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCC-----CCeeeecCcH--HHHHHHHHHH
Q 027012          109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSE-----YDLLMASTRK--TEIVTVLVEA  181 (229)
Q Consensus       109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e-----~D~ll~s~~k--tElvt~L~~~  181 (229)
                      ++++-.|.||...|-++|+.+-.+-...||..|+-.+..+....+|.+...+.     .-.+|.|+..  .+|+..|.++
T Consensus        49 ~~~~v~l~vs~~gi~v~d~~~~~~i~~~~i~~Isf~~~d~~~~~~FafI~~~~~~~~~~CHvF~c~~~~A~~i~~ai~~A  128 (135)
T d1ddma_          49 RPVRGLLHVSGDGLRVVDDETKGLIVDQTIEKVSFCAPDRNHERGFSYICRDGTTRRWMCHGFLACKDSGERLSHAVGCA  128 (135)
T ss_dssp             CCCEEEECCBTTBCCEEESSSCCCSBCCCTTTSSEEECCSSSSCEEEEEECSSSSSSCEEEEEEBSSCSSSSSHHHHHHH
T ss_pred             CCceEEEEEeCCeEEEEECCCceeEEEEccceEEEEEcCCCCceEEEEEEecCCCCcEEEEEEEeCcHHHHHHHHHHHHH
Confidence            56777888999999999987777777789999999988777667777776433     1344556532  4788889888


Q ss_pred             Hhc
Q 027012          182 TKG  184 (229)
Q Consensus       182 ~~~  184 (229)
                      ++.
T Consensus       129 F~~  131 (135)
T d1ddma_         129 FAV  131 (135)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874

>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: 3-phosphoinositide dependent protein kinase-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.57  E-value=8.6  Score=28.13  Aligned_cols=89  Identities=20%  Similarity=0.211  Sum_probs=61.2

Q ss_pred             CCccEEEeeeEEEeCCCCceeeeEEEEecCeE-EEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeecC
Q 027012           91 GDKQVLFADKILKFTGSGKMKRRILLITDFAI-YLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMAST  169 (229)
Q Consensus        91 ~~e~VlFS~~V~Kinr~gK~~~R~LiITd~ai-Y~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~  169 (229)
                      +++.|+=...+.|-... --++|.++||+..+ |-.++....+|-.|||+....+..  ..++.|.|++|. .-|.|+++
T Consensus        44 ~g~~ilK~G~L~Kr~~~-~wkkR~FvL~~~~L~YYkd~~~~~~kG~I~L~~~~~v~~--~~~~~F~I~t~~-Rty~l~a~  119 (147)
T d1w1ha_          44 ENNLILKMGPVDKRKGL-FARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQELRPEA--KNFKTFFVHTPN-RTYYLMDP  119 (147)
T ss_dssp             TTCCEEEEEEEEECCTT-SCEEEEEEEETTTEEEEEETTTTEEEEEECCCTTCEEEE--EETTEEEEECSS-CEEEEECT
T ss_pred             CCCeEEEEEEEEeecCC-cceEEEEEEcCCeeEEEeCCCcccccceEEecccccccc--ccCceEEEecCc-eEEEEEcC
Confidence            35778888999994322 46899999998755 555777788899999998776654  455678888875 46666553


Q ss_pred             --cHHHHHHHHHHHHh
Q 027012          170 --RKTEIVTVLVEATK  183 (229)
Q Consensus       170 --~ktElvt~L~~~~~  183 (229)
                        ...+=|..|..+.+
T Consensus       120 ~~d~~~Wv~aI~~v~~  135 (147)
T d1w1ha_         120 SGNAHKWCRKIQEVWR  135 (147)
T ss_dssp             TSCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHH
Confidence              33444555554443

>d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Exocyst complex protein EXO84
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.17  E-value=6.6  Score=26.51  Aligned_cols=90  Identities=8%  Similarity=0.176  Sum_probs=57.3

Q ss_pred             ccEEEeeeEEEeCCCC-c-eeeeEEEEecCeEEEecC-----CcceeEEEeeccccceEEEe--ccCCcEEEEEeCCCCC
Q 027012           93 KQVLFADKILKFTGSG-K-MKRRILLITDFAIYLVDP-----ETDALKRRIALAAVEKMCLS--ELSDNFFAIIIPSEYD  163 (229)
Q Consensus        93 e~VlFS~~V~Kinr~g-K-~~~R~LiITd~aiY~ld~-----~~~klKrrIpL~~I~gVSvS--~~~D~~~VIhv~~e~D  163 (229)
                      ..++....+++++..+ | .++|.++|=+..|.+..+     .+|+++.++||..+.=..+-  ....+.|-|..++ .-
T Consensus         2 R~li~eG~l~~~~~~~~k~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~l~~~~v~~~~d~~~~~n~f~i~~~~-~~   80 (109)
T d1zc3b1           2 QYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNPPMKDMFKLLMFP-ES   80 (109)
T ss_dssp             CCEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBTTBSSEEEEEETT-EE
T ss_pred             CEEEEeeeEEEEccCCCCcceeEEEEEecCEEEEEEEcCCcceEEEeeeEEeccceEEEEeecccccceEEEEccCC-CE
Confidence            3577888899999855 4 367677776666666543     24889999999987444432  2222456666655 35


Q ss_pred             eeeecCcH---HHHHHHHHHHHh
Q 027012          164 LLMASTRK---TEIVTVLVEATK  183 (229)
Q Consensus       164 ~ll~s~~k---tElvt~L~~~~~  183 (229)
                      ++|.+...   .+-+..|.++.+
T Consensus        81 ~~~~a~s~~eK~~W~~~l~~a~~  103 (109)
T d1zc3b1          81 RIFQAENAKIKREWLEVLEETKR  103 (109)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCHHHHHHHHHHHHHHHH
Confidence            77777554   445555555544

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Tapp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.08  E-value=5.8  Score=25.79  Aligned_cols=86  Identities=22%  Similarity=0.251  Sum_probs=59.7

Q ss_pred             EEEeeeEEEeCCCC-ceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEec-----cCCcEEEEEeCCCCCeeee
Q 027012           95 VLFADKILKFTGSG-KMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSE-----LSDNFFAIIIPSEYDLLMA  167 (229)
Q Consensus        95 VlFS~~V~Kinr~g-K~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~-----~~D~~~VIhv~~e~D~ll~  167 (229)
                      |+=+....|..+.. .-+.|.++|++..++...... ...+..|+|..+..+....     ..++.|.|..++ .-+.|.
T Consensus         3 vik~G~L~K~~~~~~~Wkkr~fvL~~~~l~yy~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~i~~~~-~~~~~~   81 (103)
T d1eaza_           3 VIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTS-RTFYVQ   81 (103)
T ss_dssp             CSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSS-CEEEEE
T ss_pred             eEEEEEEEEECCCCCCeeEEEEEEECCEEEEEecccCcccceEEEccceEEeeccccccccccceEEEEEeCC-EEEEEE
Confidence            45566777776544 358999999999998886543 4567789999887665533     334566666553 567888


Q ss_pred             cCcHHHHHHHHHHH
Q 027012          168 STRKTEIVTVLVEA  181 (229)
Q Consensus       168 s~~ktElvt~L~~~  181 (229)
                      |+.-.|+-..+...
T Consensus        82 a~s~~e~~~W~~aI   95 (103)
T d1eaza_          82 ADSPEEMHSWIKAV   95 (103)
T ss_dssp             CSSHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHH
Confidence            88888877666554